##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM62723v1 #!genome-build-accession NCBI_Assembly:GCF_000627235.1 #!annotation-date 06/14/2025 10:01:51 #!annotation-source NCBI RefSeq GCF_000627235.1-RS_2025_06_14 ##sequence-region NZ_JJLL01000001.1 1 9562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000001.1 RefSeq region 1 9562 . + . ID=NZ_JJLL01000001.1:1..9562;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000001.1 RefSeq gene 50 475 . + . ID=gene-AD11_RS00005;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS00005;old_locus_tag=AD11_4875 NZ_JJLL01000001.1 Protein Homology CDS 50 475 . + 0 ID=cds-WP_000422741.1;Parent=gene-AD11_RS00005;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD11_RS00005;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 472 822 . + . ID=gene-AD11_RS00010;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS00010;old_locus_tag=AD11_4876 NZ_JJLL01000001.1 Protein Homology CDS 472 822 . + 0 ID=cds-WP_000624722.1;Parent=gene-AD11_RS00010;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD11_RS00010;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 853 2466 . + . ID=gene-AD11_RS00015;Name=AD11_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00015;old_locus_tag=AD11_4877 NZ_JJLL01000001.1 Protein Homology CDS 853 2466 . + 0 ID=cds-WP_000080200.1;Parent=gene-AD11_RS00015;Dbxref=GenBank:WP_000080200.1;Name=WP_000080200.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AD11_RS00015;product=IS66-like element ISEc23 family transposase;protein_id=WP_000080200.1;transl_table=11 NZ_JJLL01000001.1 RefSeq pseudogene 2498 2818 . + . ID=gene-AD11_RS00020;Name=AD11_RS00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00020;old_locus_tag=AD11_4878;partial=true;pseudo=true;start_range=.,2498 NZ_JJLL01000001.1 Protein Homology CDS 2498 2818 . + 0 ID=cds-AD11_RS00020;Parent=gene-AD11_RS00020;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AD11_RS00020;partial=true;product=thermonuclease family protein;pseudo=true;start_range=.,2498;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 2864 3073 . + . ID=gene-AD11_RS00025;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AD11_RS00025;old_locus_tag=AD11_4879 NZ_JJLL01000001.1 Protein Homology CDS 2864 3073 . + 0 ID=cds-WP_001298565.1;Parent=gene-AD11_RS00025;Dbxref=GenBank:WP_001298565.1;Name=WP_001298565.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AD11_RS00025;product=hemolysin expression modulator Hha;protein_id=WP_001298565.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 3111 3701 . + . ID=gene-AD11_RS00030;Name=AD11_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00030;old_locus_tag=AD11_4880 NZ_JJLL01000001.1 Protein Homology CDS 3111 3701 . + 0 ID=cds-WP_000766805.1;Parent=gene-AD11_RS00030;Dbxref=GenBank:WP_000766805.1;Name=WP_000766805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AD11_RS00030;product=DUF2726 domain-containing protein;protein_id=WP_000766805.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 3941 4201 . + . ID=gene-AD11_RS00035;Name=AD11_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00035;old_locus_tag=AD11_4881 NZ_JJLL01000001.1 Protein Homology CDS 3941 4201 . + 0 ID=cds-WP_000083819.1;Parent=gene-AD11_RS00035;Dbxref=GenBank:WP_000083819.1;Name=WP_000083819.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858391.1;locus_tag=AD11_RS00035;product=replication regulatory protein RepA;protein_id=WP_000083819.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 4426 4500 . + . ID=gene-AD11_RS00040;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AD11_RS00040 NZ_JJLL01000001.1 Protein Homology CDS 4426 4500 . + 0 ID=cds-WP_001365705.1;Parent=gene-AD11_RS00040;Dbxref=GenBank:WP_001365705.1;Name=WP_001365705.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AD11_RS00040;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 4493 5350 . + . ID=gene-AD11_RS00045;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AD11_RS00045;old_locus_tag=AD11_4883 NZ_JJLL01000001.1 Protein Homology CDS 4493 5350 . + 0 ID=cds-WP_000130647.1;Parent=gene-AD11_RS00045;Dbxref=GenBank:WP_000130647.1;Name=WP_000130647.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AD11_RS00045;product=incFII family plasmid replication initiator RepA;protein_id=WP_000130647.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 6051 6191 . + . ID=gene-AD11_RS31860;Name=AD11_RS31860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31860;old_locus_tag=AD11_4884 NZ_JJLL01000001.1 Protein Homology CDS 6051 6191 . + 0 ID=cds-WP_001333237.1;Parent=gene-AD11_RS31860;Dbxref=GenBank:WP_001333237.1;Name=WP_001333237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004031751.1;locus_tag=AD11_RS31860;product=hypothetical protein;protein_id=WP_001333237.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 6289 6942 . + . ID=gene-AD11_RS00050;Name=AD11_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00050;old_locus_tag=AD11_4886 NZ_JJLL01000001.1 Protein Homology CDS 6289 6942 . + 0 ID=cds-WP_000616807.1;Parent=gene-AD11_RS00050;Dbxref=GenBank:WP_000616807.1;Name=WP_000616807.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001757010.1;locus_tag=AD11_RS00050;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_000616807.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 7035 7292 . + . ID=gene-AD11_RS31100;Name=pemI;gbkey=Gene;gene=pemI;gene_biotype=protein_coding;locus_tag=AD11_RS31100;old_locus_tag=AD11_4887 NZ_JJLL01000001.1 Protein Homology CDS 7035 7292 . + 0 ID=cds-WP_000557619.1;Parent=gene-AD11_RS31100;Dbxref=GenBank:WP_000557619.1;Name=WP_000557619.1;gbkey=CDS;gene=pemI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000557619.1;locus_tag=AD11_RS31100;product=type II toxin-antitoxin system antitoxin PemI;protein_id=WP_000557619.1;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 7294 7626 . + . ID=gene-AD11_RS00060;Name=pemK-mt;gbkey=Gene;gene=pemK-mt;gene_biotype=protein_coding;locus_tag=AD11_RS00060;old_locus_tag=AD11_4888 NZ_JJLL01000001.1 Protein Homology CDS 7294 7626 . + 0 ID=cds-WP_000439434.1;Parent=gene-AD11_RS00060;Dbxref=GenBank:WP_000439434.1;Name=WP_000439434.1;gbkey=CDS;gene=pemK-mt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206891.1;locus_tag=AD11_RS00060;product=type II toxin-antitoxin system toxin endoribonuclease PemK-mt;protein_id=WP_000439434.1;transl_table=11 NZ_JJLL01000001.1 RefSeq pseudogene 7763 9241 . - . ID=gene-AD11_RS00065;Name=AD11_RS00065;end_range=9241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00065;old_locus_tag=AD11_4889;partial=true;pseudo=true NZ_JJLL01000001.1 Protein Homology CDS 7763 9241 . - 0 ID=cds-AD11_RS00065;Parent=gene-AD11_RS00065;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=9241,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020326821.1;locus_tag=AD11_RS00065;partial=true;product=Tn3-like element Tn5403 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000001.1 RefSeq gene 9296 9562 . - . ID=gene-AD11_RS00070;Name=AD11_RS00070;end_range=9562,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00070;old_locus_tag=AD11_4890;partial=true NZ_JJLL01000001.1 Protein Homology CDS 9296 9562 . - 0 ID=cds-WP_004155240.1;Parent=gene-AD11_RS00070;Dbxref=GenBank:WP_004155240.1;Name=WP_004155240.1;end_range=9562,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS00070;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_004155240.1;transl_table=11 ##sequence-region NZ_JJLL01000002.1 1 4508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000002.1 RefSeq region 1 4508 . + . ID=NZ_JJLL01000002.1:1..4508;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000002.1 RefSeq gene 1 285 . + . ID=gene-AD11_RS00075;Name=AD11_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00075;old_locus_tag=AD11_4892;partial=true;start_range=.,1 NZ_JJLL01000002.1 Protein Homology CDS 1 285 . + 0 ID=cds-WP_000000248.1;Parent=gene-AD11_RS00075;Dbxref=GenBank:WP_000000248.1;Name=WP_000000248.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309824.1;locus_tag=AD11_RS00075;partial=true;product=phage head closure protein;protein_id=WP_000000248.1;start_range=.,1;transl_table=11 NZ_JJLL01000002.1 RefSeq gene 282 728 . + . ID=gene-AD11_RS00080;Name=AD11_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00080;old_locus_tag=AD11_4893 NZ_JJLL01000002.1 Protein Homology CDS 282 728 . + 0 ID=cds-WP_000573362.1;Parent=gene-AD11_RS00080;Dbxref=GenBank:WP_000573362.1;Name=WP_000573362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309825.1;locus_tag=AD11_RS00080;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_000573362.1;transl_table=11 NZ_JJLL01000002.1 RefSeq gene 725 1069 . + . ID=gene-AD11_RS00085;Name=gp17;gbkey=Gene;gene=gp17;gene_biotype=protein_coding;locus_tag=AD11_RS00085;old_locus_tag=AD11_4894 NZ_JJLL01000002.1 Protein Homology CDS 725 1069 . + 0 ID=cds-WP_000133388.1;Parent=gene-AD11_RS00085;Dbxref=GenBank:WP_000133388.1;Name=WP_000133388.1;gbkey=CDS;gene=gp17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309575.1;locus_tag=AD11_RS00085;product=tail completion protein gp17;protein_id=WP_000133388.1;transl_table=11 NZ_JJLL01000002.1 RefSeq gene 1136 1852 . + . ID=gene-AD11_RS00090;Name=AD11_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00090;old_locus_tag=AD11_4895 NZ_JJLL01000002.1 Protein Homology CDS 1136 1852 . + 0 ID=cds-WP_033866131.1;Parent=gene-AD11_RS00090;Dbxref=GenBank:WP_033866131.1;Name=WP_033866131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310270.1;locus_tag=AD11_RS00090;product=major tail subunit;protein_id=WP_033866131.1;transl_table=11 NZ_JJLL01000002.1 RefSeq gene 1867 2241 . + . ID=gene-AD11_RS00095;Name=AD11_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00095;old_locus_tag=AD11_4896 NZ_JJLL01000002.1 Protein Homology CDS 1867 2241 . + 0 ID=cds-WP_033808199.1;Parent=gene-AD11_RS00095;Dbxref=GenBank:WP_033808199.1;Name=WP_033808199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310269.1;locus_tag=AD11_RS00095;product=phage tail assembly chaperone;protein_id=WP_033808199.1;transl_table=11 NZ_JJLL01000002.1 RefSeq gene 2265 2546 . + . ID=gene-AD11_RS00100;Name=AD11_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00100;old_locus_tag=AD11_4897 NZ_JJLL01000002.1 Protein Homology CDS 2265 2546 . + 0 ID=cds-WP_001234268.1;Parent=gene-AD11_RS00100;Dbxref=GenBank:WP_001234268.1;Name=WP_001234268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234272.1;locus_tag=AD11_RS00100;product=phage tail assembly protein T;protein_id=WP_001234268.1;transl_table=11 NZ_JJLL01000002.1 RefSeq gene 2594 4508 . + . ID=gene-AD11_RS00105;Name=AD11_RS00105;end_range=4508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00105;old_locus_tag=AD11_4898;partial=true NZ_JJLL01000002.1 Protein Homology CDS 2594 4508 . + 0 ID=cds-WP_033866135.1;Parent=gene-AD11_RS00105;Dbxref=GenBank:WP_033866135.1;Name=WP_033866135.1;end_range=4508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304285.1;locus_tag=AD11_RS00105;partial=true;product=phage tail tape measure protein;protein_id=WP_033866135.1;transl_table=11 ##sequence-region NZ_JJLL01000003.1 1 2761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000003.1 RefSeq region 1 2761 . + . ID=NZ_JJLL01000003.1:1..2761;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000003.1 RefSeq gene 1 222 . + . ID=gene-AD11_RS00110;Name=AD11_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00110;old_locus_tag=AD11_4899;partial=true;start_range=.,1 NZ_JJLL01000003.1 Protein Homology CDS 1 222 . + 0 ID=cds-WP_033866139.1;Parent=gene-AD11_RS00110;Dbxref=GenBank:WP_033866139.1;Name=WP_033866139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AD11_RS00110;partial=true;product=YfiM family lipoprotein;protein_id=WP_033866139.1;start_range=.,1;transl_table=11 NZ_JJLL01000003.1 RefSeq gene 219 1517 . - . ID=gene-AD11_RS00115;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AD11_RS00115;old_locus_tag=AD11_4900 NZ_JJLL01000003.1 Protein Homology CDS 219 1517 . - 0 ID=cds-WP_000841103.1;Parent=gene-AD11_RS00115;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AD11_RS00115;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JJLL01000003.1 RefSeq gene 1842 1957 . - . ID=gene-AD11_RS00125;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS00125;old_locus_tag=AD11_4901 NZ_JJLL01000003.1 cmsearch rRNA 1842 1957 . - . ID=rna-AD11_RS00125;Parent=gene-AD11_RS00125;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00125;product=5S ribosomal RNA NZ_JJLL01000003.1 cmsearch exon 1842 1957 . - . ID=exon-AD11_RS00125-1;Parent=rna-AD11_RS00125;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00125;product=5S ribosomal RNA NZ_JJLL01000003.1 RefSeq gene 1997 2072 . - . ID=gene-AD11_RS00130;Name=AD11_RS00130;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS00130;old_locus_tag=AD11_4902 NZ_JJLL01000003.1 tRNAscan-SE tRNA 1997 2072 . - . ID=rna-AD11_RS00130;Parent=gene-AD11_RS00130;anticodon=(pos:complement(2037..2039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00130;product=tRNA-Thr NZ_JJLL01000003.1 tRNAscan-SE exon 1997 2072 . - . ID=exon-AD11_RS00130-1;Parent=rna-AD11_RS00130;anticodon=(pos:complement(2037..2039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00130;product=tRNA-Thr NZ_JJLL01000003.1 RefSeq gene 2087 2202 . - . ID=gene-AD11_RS00135;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS00135;old_locus_tag=AD11_4903 NZ_JJLL01000003.1 cmsearch rRNA 2087 2202 . - . ID=rna-AD11_RS00135;Parent=gene-AD11_RS00135;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00135;product=5S ribosomal RNA NZ_JJLL01000003.1 cmsearch exon 2087 2202 . - . ID=exon-AD11_RS00135-1;Parent=rna-AD11_RS00135;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00135;product=5S ribosomal RNA NZ_JJLL01000003.1 RefSeq gene 2297 2761 . - . ID=gene-AD11_RS00140;Name=AD11_RS00140;end_range=2761,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS00140;partial=true NZ_JJLL01000003.1 cmsearch rRNA 2297 2761 . - . ID=rna-AD11_RS00140;Parent=gene-AD11_RS00140;Dbxref=RFAM:RF02541;end_range=2761,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00140;partial=true;product=23S ribosomal RNA NZ_JJLL01000003.1 cmsearch exon 2297 2761 . - . ID=exon-AD11_RS00140-1;Parent=rna-AD11_RS00140;Dbxref=RFAM:RF02541;end_range=2761,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00140;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLL01000004.1 1 381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000004.1 RefSeq region 1 381 . + . ID=NZ_JJLL01000004.1:1..381;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 ##sequence-region NZ_JJLL01000005.1 1 689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000005.1 RefSeq region 1 689 . + . ID=NZ_JJLL01000005.1:1..689;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000005.1 RefSeq gene 1 689 . + . ID=gene-AD11_RS00145;Name=AD11_RS00145;end_range=689,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00145;old_locus_tag=AD11_4904;partial=true;start_range=.,1 NZ_JJLL01000005.1 Protein Homology CDS 1 689 . + 0 ID=cds-WP_033866143.1;Parent=gene-AD11_RS00145;Dbxref=GenBank:WP_033866143.1;Name=WP_033866143.1;end_range=689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309148.1;locus_tag=AD11_RS00145;partial=true;product=phage tail tip protein J-related protein;protein_id=WP_033866143.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000006.1 1 927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000006.1 RefSeq region 1 927 . + . ID=NZ_JJLL01000006.1:1..927;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000006.1 RefSeq gene 8 123 . - . ID=gene-AD11_RS00150;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS00150;old_locus_tag=AD11_4905 NZ_JJLL01000006.1 cmsearch rRNA 8 123 . - . ID=rna-AD11_RS00150;Parent=gene-AD11_RS00150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00150;product=5S ribosomal RNA NZ_JJLL01000006.1 cmsearch exon 8 123 . - . ID=exon-AD11_RS00150-1;Parent=rna-AD11_RS00150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00150;product=5S ribosomal RNA NZ_JJLL01000006.1 RefSeq gene 163 238 . - . ID=gene-AD11_RS00155;Name=AD11_RS00155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS00155;old_locus_tag=AD11_4907 NZ_JJLL01000006.1 tRNAscan-SE tRNA 163 238 . - . ID=rna-AD11_RS00155;Parent=gene-AD11_RS00155;anticodon=(pos:complement(203..205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00155;product=tRNA-Thr NZ_JJLL01000006.1 tRNAscan-SE exon 163 238 . - . ID=exon-AD11_RS00155-1;Parent=rna-AD11_RS00155;anticodon=(pos:complement(203..205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00155;product=tRNA-Thr NZ_JJLL01000006.1 RefSeq gene 253 368 . - . ID=gene-AD11_RS00160;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS00160;old_locus_tag=AD11_4908 NZ_JJLL01000006.1 cmsearch rRNA 253 368 . - . ID=rna-AD11_RS00160;Parent=gene-AD11_RS00160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00160;product=5S ribosomal RNA NZ_JJLL01000006.1 cmsearch exon 253 368 . - . ID=exon-AD11_RS00160-1;Parent=rna-AD11_RS00160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00160;product=5S ribosomal RNA NZ_JJLL01000006.1 RefSeq gene 463 927 . - . ID=gene-AD11_RS00165;Name=AD11_RS00165;end_range=927,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS00165;partial=true NZ_JJLL01000006.1 cmsearch rRNA 463 927 . - . ID=rna-AD11_RS00165;Parent=gene-AD11_RS00165;Dbxref=RFAM:RF02541;end_range=927,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00165;partial=true;product=23S ribosomal RNA NZ_JJLL01000006.1 cmsearch exon 463 927 . - . ID=exon-AD11_RS00165-1;Parent=rna-AD11_RS00165;Dbxref=RFAM:RF02541;end_range=927,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00165;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLL01000007.1 1 15539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000007.1 RefSeq region 1 15539 . + . ID=NZ_JJLL01000007.1:1..15539;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000007.1 RefSeq gene 1 223 . + . ID=gene-AD11_RS00170;Name=AD11_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00170;old_locus_tag=AD11_4909;partial=true;start_range=.,1 NZ_JJLL01000007.1 Protein Homology CDS 1 223 . + 1 ID=cds-WP_001395339.1;Parent=gene-AD11_RS00170;Dbxref=GenBank:WP_001395339.1;Name=WP_001395339.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS00170;partial=true;product=IS1 family transposase;protein_id=WP_001395339.1;start_range=.,1;transl_table=11 NZ_JJLL01000007.1 RefSeq pseudogene 238 421 . + . ID=gene-AD11_RS00175;Name=AD11_RS00175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00175;partial=true;pseudo=true;start_range=.,238 NZ_JJLL01000007.1 Protein Homology CDS 238 421 . + 0 ID=cds-AD11_RS00175;Parent=gene-AD11_RS00175;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052677.1;locus_tag=AD11_RS00175;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,238;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 549 830 . + . ID=gene-AD11_RS00185;Name=AD11_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00185;old_locus_tag=AD11_4911 NZ_JJLL01000007.1 Protein Homology CDS 549 830 . + 0 ID=cds-WP_001333089.1;Parent=gene-AD11_RS00185;Dbxref=GenBank:WP_001333089.1;Name=WP_001333089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105075.1;locus_tag=AD11_RS00185;product=hypothetical protein;protein_id=WP_001333089.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 953 1303 . - . ID=gene-AD11_RS00190;Name=AD11_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00190;old_locus_tag=AD11_4912 NZ_JJLL01000007.1 Protein Homology CDS 953 1303 . - 0 ID=cds-WP_000361389.1;Parent=gene-AD11_RS00190;Dbxref=GenBank:WP_000361389.1;Name=WP_000361389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001630992.1;locus_tag=AD11_RS00190;product=plasmid partitioning/stability family protein;protein_id=WP_000361389.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 1306 2268 . - . ID=gene-AD11_RS00195;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;gene_synonym=stbA;locus_tag=AD11_RS00195;old_locus_tag=AD11_4913 NZ_JJLL01000007.1 Protein Homology CDS 1306 2268 . - 0 ID=cds-WP_000959884.1;Parent=gene-AD11_RS00195;Dbxref=GenBank:WP_000959884.1;Name=WP_000959884.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959884.1;locus_tag=AD11_RS00195;product=plasmid segregation protein ParM;protein_id=WP_000959884.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 2374 2580 . - . ID=gene-AD11_RS33075;Name=AD11_RS33075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33075 NZ_JJLL01000007.1 Protein Homology CDS 2374 2580 . - 0 ID=cds-WP_306173356.1;Parent=gene-AD11_RS33075;Dbxref=GenBank:WP_306173356.1;Name=WP_306173356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311063.1;locus_tag=AD11_RS33075;product=hypothetical protein;protein_id=WP_306173356.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 2481 2708 . + . ID=gene-AD11_RS30270;Name=AD11_RS30270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS30270 NZ_JJLL01000007.1 Protein Homology CDS 2481 2708 . + 0 ID=cds-WP_170942586.1;Parent=gene-AD11_RS30270;Dbxref=GenBank:WP_170942586.1;Name=WP_170942586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015589601.1;locus_tag=AD11_RS30270;product=hypothetical protein;protein_id=WP_170942586.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 2785 3468 . + . ID=gene-AD11_RS00205;Name=AD11_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00205;old_locus_tag=AD11_4915 NZ_JJLL01000007.1 Protein Homology CDS 2785 3468 . + 0 ID=cds-WP_000085883.1;Parent=gene-AD11_RS00205;Dbxref=GenBank:WP_000085883.1;Name=WP_000085883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=AD11_RS00205;product=DNA methylase;protein_id=WP_000085883.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 3469 3690 . + . ID=gene-AD11_RS00210;Name=AD11_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00210;old_locus_tag=AD11_4916 NZ_JJLL01000007.1 Protein Homology CDS 3469 3690 . + 0 ID=cds-WP_001104881.1;Parent=gene-AD11_RS00210;Dbxref=GenBank:WP_001104881.1;Name=WP_001104881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858332.1;locus_tag=AD11_RS00210;product=hypothetical protein;protein_id=WP_001104881.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 3704 4138 . + . ID=gene-AD11_RS00215;Name=AD11_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00215;old_locus_tag=AD11_4917 NZ_JJLL01000007.1 Protein Homology CDS 3704 4138 . + 0 ID=cds-WP_000274503.1;Parent=gene-AD11_RS00215;Dbxref=GenBank:WP_000274503.1;Name=WP_000274503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AD11_RS00215;product=DUF1380 family protein;protein_id=WP_000274503.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 4189 4965 . + . ID=gene-AD11_RS31865;Name=AD11_RS31865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31865;old_locus_tag=AD11_4918 NZ_JJLL01000007.1 Protein Homology CDS 4189 4965 . + 0 ID=cds-WP_001383963.1;Parent=gene-AD11_RS31865;Dbxref=GenBank:WP_001383963.1;Name=WP_001383963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052647.1;locus_tag=AD11_RS31865;product=hypothetical protein;protein_id=WP_001383963.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 5383 5808 . + . ID=gene-AD11_RS00230;Name=AD11_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00230;old_locus_tag=AD11_4919 NZ_JJLL01000007.1 Protein Homology CDS 5383 5808 . + 0 ID=cds-WP_001198928.1;Parent=gene-AD11_RS00230;Dbxref=GenBank:WP_001198928.1;Name=WP_001198928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AD11_RS00230;product=antirestriction protein;protein_id=WP_001198928.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 5855 6277 . + . ID=gene-AD11_RS00235;Name=AD11_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00235;old_locus_tag=AD11_4920 NZ_JJLL01000007.1 Protein Homology CDS 5855 6277 . + 0 ID=cds-WP_000271762.1;Parent=gene-AD11_RS00235;Dbxref=GenBank:WP_000271762.1;Name=WP_000271762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AD11_RS00235;product=DUF1380 family protein;protein_id=WP_000271762.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 6274 6465 . + . ID=gene-AD11_RS00240;Name=AD11_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00240;old_locus_tag=AD11_4921 NZ_JJLL01000007.1 Protein Homology CDS 6274 6465 . + 0 ID=cds-WP_001027493.1;Parent=gene-AD11_RS00240;Dbxref=GenBank:WP_001027493.1;Name=WP_001027493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AD11_RS00240;product=hypothetical protein;protein_id=WP_001027493.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 7503 7733 . + . ID=gene-AD11_RS00245;Name=AD11_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00245 NZ_JJLL01000007.1 Protein Homology CDS 7503 7733 . + 0 ID=cds-WP_000218647.1;Parent=gene-AD11_RS00245;Dbxref=GenBank:WP_000218647.1;Name=WP_000218647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AD11_RS00245;product=hypothetical protein;protein_id=WP_000218647.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 7785 9146 . + . ID=gene-AD11_RS00250;Name=AD11_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00250;old_locus_tag=AD11_4924 NZ_JJLL01000007.1 Protein Homology CDS 7785 9146 . + 0 ID=cds-WP_000170713.1;Parent=gene-AD11_RS00250;Dbxref=GenBank:WP_000170713.1;Name=WP_000170713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AD11_RS00250;product=DUF3560 domain-containing protein;protein_id=WP_000170713.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 9193 9756 . + . ID=gene-AD11_RS00255;Name=AD11_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00255;old_locus_tag=AD11_4925 NZ_JJLL01000007.1 Protein Homology CDS 9193 9756 . + 0 ID=cds-WP_001311069.1;Parent=gene-AD11_RS00255;Dbxref=GenBank:WP_001311069.1;Name=WP_001311069.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AD11_RS00255;product=methyltransferase;protein_id=WP_001311069.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 9756 9998 . + . ID=gene-AD11_RS32265;Name=AD11_RS32265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32265 NZ_JJLL01000007.1 Protein Homology CDS 9756 9998 . + 0 ID=cds-WP_001299722.1;Parent=gene-AD11_RS32265;Dbxref=GenBank:WP_001299722.1;Name=WP_001299722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901240.1;locus_tag=AD11_RS32265;product=hypothetical protein;protein_id=WP_001299722.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 9908 10168 . + . ID=gene-AD11_RS32270;Name=AD11_RS32270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32270 NZ_JJLL01000007.1 Protein Homology CDS 9908 10168 . + 0 ID=cds-WP_071600428.1;Parent=gene-AD11_RS32270;Dbxref=GenBank:WP_071600428.1;Name=WP_071600428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001380705.1;locus_tag=AD11_RS32270;product=hypothetical protein;protein_id=WP_071600428.1;transl_table=11 NZ_JJLL01000007.1 RefSeq pseudogene 10165 10339 . - . ID=gene-AD11_RS33080;Name=AD11_RS33080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33080;partial=true;pseudo=true;start_range=.,10165 NZ_JJLL01000007.1 Protein Homology CDS 10165 10339 . - 0 ID=cds-AD11_RS33080;Parent=gene-AD11_RS33080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AD11_RS33080;partial=true;product=hypothetical protein;pseudo=true;start_range=.,10165;transl_table=11 NZ_JJLL01000007.1 RefSeq pseudogene 10407 10612 . + . ID=gene-AD11_RS33085;Name=AD11_RS33085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33085;pseudo=true NZ_JJLL01000007.1 Protein Homology CDS 10407 10612 . + 0 ID=cds-AD11_RS33085;Parent=gene-AD11_RS33085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AD11_RS33085;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 10638 11165 . + . ID=gene-AD11_RS00260;Name=AD11_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00260;old_locus_tag=AD11_4927 NZ_JJLL01000007.1 Protein Homology CDS 10638 11165 . + 0 ID=cds-WP_000290793.1;Parent=gene-AD11_RS00260;Dbxref=GenBank:WP_000290793.1;Name=WP_000290793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AD11_RS00260;product=single-stranded DNA-binding protein;protein_id=WP_000290793.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 11221 11454 . + . ID=gene-AD11_RS00265;Name=AD11_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00265;old_locus_tag=AD11_4928 NZ_JJLL01000007.1 Protein Homology CDS 11221 11454 . + 0 ID=cds-WP_000006004.1;Parent=gene-AD11_RS00265;Dbxref=GenBank:WP_000006004.1;Name=WP_000006004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005972.1;locus_tag=AD11_RS00265;product=DUF905 domain-containing protein;protein_id=WP_000006004.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 11513 13471 . + . ID=gene-AD11_RS00270;Name=AD11_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00270;old_locus_tag=AD11_4929 NZ_JJLL01000007.1 Protein Homology CDS 11513 13471 . + 0 ID=cds-WP_001145469.1;Parent=gene-AD11_RS00270;Dbxref=GenBank:WP_001145469.1;Name=WP_001145469.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117326.1;locus_tag=AD11_RS00270;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001145469.1;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 13526 13960 . + . ID=gene-AD11_RS00275;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AD11_RS00275;old_locus_tag=AD11_4930 NZ_JJLL01000007.1 Protein Homology CDS 13526 13960 . + 0 ID=cds-WP_000845901.1;Parent=gene-AD11_RS00275;Dbxref=GenBank:WP_000845901.1;Name=WP_000845901.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AD11_RS00275;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845901.1;transl_table=11 NZ_JJLL01000007.1 RefSeq pseudogene 13957 14719 . + . ID=gene-AD11_RS00280;Name=AD11_RS00280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00280;old_locus_tag=AD11_4931;pseudo=true NZ_JJLL01000007.1 Protein Homology CDS 13957 14719 . + 0 ID=cds-AD11_RS00280;Parent=gene-AD11_RS00280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=AD11_RS00280;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 NZ_JJLL01000007.1 RefSeq pseudogene 14897 15046 . + . ID=gene-AD11_RS32275;Name=mok;end_range=15046,.;gbkey=Gene;gene=mok;gene_biotype=pseudogene;locus_tag=AD11_RS32275;partial=true;pseudo=true NZ_JJLL01000007.1 Protein Homology CDS 14897 15046 . + 0 ID=cds-AD11_RS32275;Parent=gene-AD11_RS32275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15046,.;gbkey=CDS;gene=mok;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AD11_RS32275;partial=true;product=plasmid maintenance protein Mok;pseudo=true;transl_table=11 NZ_JJLL01000007.1 RefSeq gene 14988 15113 . + . ID=gene-AD11_RS27750;Name=AD11_RS27750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS27750 NZ_JJLL01000007.1 Protein Homology CDS 14988 15113 . + 0 ID=cds-WP_001372321.1;Parent=gene-AD11_RS27750;Dbxref=GenBank:WP_001372321.1;Name=WP_001372321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=AD11_RS27750;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_001372321.1;transl_table=11 ##sequence-region NZ_JJLL01000008.1 1 3098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000008.1 RefSeq region 1 3098 . + . ID=NZ_JJLL01000008.1:1..3098;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000008.1 RefSeq gene 1 231 . - . ID=gene-AD11_RS00290;Name=AD11_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00290;old_locus_tag=AD11_4932;partial=true;start_range=.,1 NZ_JJLL01000008.1 Protein Homology CDS 1 231 . - 0 ID=cds-WP_000567701.1;Parent=gene-AD11_RS00290;Dbxref=GenBank:WP_000567701.1;Name=WP_000567701.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AD11_RS00290;partial=true;product=transposase;protein_id=WP_000567701.1;start_range=.,1;transl_table=11 NZ_JJLL01000008.1 RefSeq pseudogene 406 885 . - . ID=gene-AD11_RS00295;Name=AD11_RS00295;end_range=885,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00295;old_locus_tag=AD11_4933;partial=true;pseudo=true NZ_JJLL01000008.1 Protein Homology CDS 406 885 . - 0 ID=cds-AD11_RS00295;Parent=gene-AD11_RS00295;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=885,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS00295;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000008.1 RefSeq gene 969 2477 . - . ID=gene-AD11_RS00300;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AD11_RS00300;old_locus_tag=AD11_4934 NZ_JJLL01000008.1 Protein Homology CDS 969 2477 . - 0 ID=cds-WP_001189111.1;Parent=gene-AD11_RS00300;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AD11_RS00300;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 NZ_JJLL01000008.1 RefSeq gene 2906 3098 . + . ID=gene-AD11_RS32280;Name=AD11_RS32280;end_range=3098,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32280;partial=true NZ_JJLL01000008.1 GeneMarkS-2+ CDS 2906 3098 . + 0 ID=cds-WP_072148446.1;Parent=gene-AD11_RS32280;Dbxref=GenBank:WP_072148446.1;Name=WP_072148446.1;end_range=3098,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32280;partial=true;product=hypothetical protein;protein_id=WP_072148446.1;transl_table=11 ##sequence-region NZ_JJLL01000009.1 1 554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000009.1 RefSeq region 1 554 . + . ID=NZ_JJLL01000009.1:1..554;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000009.1 RefSeq gene 1 543 . + . ID=gene-AD11_RS00305;Name=AD11_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00305;old_locus_tag=AD11_4935;partial=true;start_range=.,1 NZ_JJLL01000009.1 Protein Homology CDS 1 543 . + 0 ID=cds-WP_033866144.1;Parent=gene-AD11_RS00305;Dbxref=GenBank:WP_033866144.1;Name=WP_033866144.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AD11_RS00305;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_033866144.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000010.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000010.1 RefSeq region 1 777 . + . ID=NZ_JJLL01000010.1:1..777;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000010.1 RefSeq pseudogene 1 766 . - . ID=gene-AD11_RS31130;Name=AD11_RS31130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31130;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000010.1 Protein Homology CDS 1 766 . - 0 ID=cds-AD11_RS31130;Parent=gene-AD11_RS31130;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS31130;partial=true;product=IS3-like element IS629 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000010.1 cmsearch sequence_feature 369 485 . - . ID=id-AD11_RS31130;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS31130;pseudo=true ##sequence-region NZ_JJLL01000011.1 1 3158 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000011.1 RefSeq region 1 3158 . + . ID=NZ_JJLL01000011.1:1..3158;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000011.1 RefSeq pseudogene 1 2488 . + . ID=gene-AD11_RS32285;Name=AD11_RS32285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32285;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000011.1 Protein Homology CDS 1 2488 . + 2 ID=cds-AD11_RS32285;Parent=gene-AD11_RS32285;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303195.1;locus_tag=AD11_RS32285;partial=true;product=phage portal protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000011.1 RefSeq gene 2485 2811 . + . ID=gene-AD11_RS00330;Name=AD11_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00330;old_locus_tag=AD11_4940 NZ_JJLL01000011.1 Protein Homology CDS 2485 2811 . + 0 ID=cds-WP_000125990.1;Parent=gene-AD11_RS00330;Dbxref=GenBank:WP_000125990.1;Name=WP_000125990.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309823.1;locus_tag=AD11_RS00330;product=head-tail connector protein;protein_id=WP_000125990.1;transl_table=11 NZ_JJLL01000011.1 RefSeq gene 2821 3158 . + . ID=gene-AD11_RS00335;Name=AD11_RS00335;end_range=3158,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00335;old_locus_tag=AD11_4941;partial=true NZ_JJLL01000011.1 Protein Homology CDS 2821 3158 . + 0 ID=cds-WP_032189910.1;Parent=gene-AD11_RS00335;Dbxref=GenBank:WP_032189910.1;Name=WP_032189910.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=3158,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309824.1;locus_tag=AD11_RS00335;partial=true;product=phage head closure protein;protein_id=WP_032189910.1;transl_table=11 ##sequence-region NZ_JJLL01000012.1 1 2032 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000012.1 RefSeq region 1 2032 . + . ID=NZ_JJLL01000012.1:1..2032;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000012.1 RefSeq gene 86 658 . + . ID=gene-AD11_RS00340;Name=AD11_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00340;old_locus_tag=AD11_4942 NZ_JJLL01000012.1 Protein Homology CDS 86 658 . + 0 ID=cds-WP_033866150.1;Parent=gene-AD11_RS00340;Dbxref=GenBank:WP_033866150.1;Name=WP_033866150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556902.1;locus_tag=AD11_RS00340;product=DUF4376 domain-containing protein;protein_id=WP_033866150.1;transl_table=11 NZ_JJLL01000012.1 RefSeq gene 1138 2032 . + . ID=gene-AD11_RS00345;Name=AD11_RS00345;end_range=2032,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00345;old_locus_tag=AD11_4943;partial=true NZ_JJLL01000012.1 Protein Homology CDS 1138 2032 . + 0 ID=cds-WP_033866151.1;Parent=gene-AD11_RS00345;Dbxref=GenBank:WP_033866151.1;Name=WP_033866151.1;end_range=2032,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537314.1;locus_tag=AD11_RS00345;partial=true;product=hypothetical protein;protein_id=WP_033866151.1;transl_table=11 ##sequence-region NZ_JJLL01000013.1 1 17677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000013.1 RefSeq region 1 17677 . + . ID=NZ_JJLL01000013.1:1..17677;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000013.1 RefSeq pseudogene 49 147 . - . ID=gene-AD11_RS32290;Name=AD11_RS32290;end_range=147,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32290;old_locus_tag=AD11_4944;partial=true;pseudo=true;start_range=.,49 NZ_JJLL01000013.1 Protein Homology CDS 49 147 . - 0 ID=cds-AD11_RS32290;Parent=gene-AD11_RS32290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=147,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211765.1;locus_tag=AD11_RS32290;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,49;transl_table=11 NZ_JJLL01000013.1 RefSeq pseudogene 135 251 . - . ID=gene-AD11_RS32295;Name=AD11_RS32295;end_range=251,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32295;partial=true;pseudo=true;start_range=.,135 NZ_JJLL01000013.1 Protein Homology CDS 135 251 . - 0 ID=cds-AD11_RS32295;Parent=gene-AD11_RS32295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851036.1;locus_tag=AD11_RS32295;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;start_range=.,135;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 378 980 . - . ID=gene-AD11_RS31870;Name=AD11_RS31870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31870 NZ_JJLL01000013.1 Protein Homology CDS 378 980 . - 0 ID=cds-WP_051577858.1;Parent=gene-AD11_RS31870;Dbxref=GenBank:WP_051577858.1;Name=WP_051577858.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837193.1;locus_tag=AD11_RS31870;product=type II secretion system protein;protein_id=WP_051577858.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 1402 2040 . + . ID=gene-AD11_RS00355;Name=AD11_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00355;old_locus_tag=AD11_4947 NZ_JJLL01000013.1 Protein Homology CDS 1402 2040 . + 0 ID=cds-WP_033864966.1;Parent=gene-AD11_RS00355;Dbxref=GenBank:WP_033864966.1;Name=WP_033864966.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=AD11_RS00355;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_033864966.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 2051 2467 . - . ID=gene-AD11_RS00360;Name=AD11_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00360 NZ_JJLL01000013.1 Protein Homology CDS 2051 2467 . - 0 ID=cds-WP_032299572.1;Parent=gene-AD11_RS00360;Dbxref=GenBank:WP_032299572.1;Name=WP_032299572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.6;locus_tag=AD11_RS00360;product=lytic transglycosylase domain-containing protein;protein_id=WP_032299572.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 2455 3186 . - . ID=gene-AD11_RS00365;Name=AD11_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00365;old_locus_tag=AD11_4948 NZ_JJLL01000013.1 Protein Homology CDS 2455 3186 . - 0 ID=cds-WP_033808043.1;Parent=gene-AD11_RS00365;Dbxref=GenBank:WP_033808043.1;Name=WP_033808043.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575755.1;locus_tag=AD11_RS00365;product=prepilin peptidase;protein_id=WP_033808043.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 3191 4156 . - . ID=gene-AD11_RS00370;Name=AD11_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00370;old_locus_tag=AD11_4949 NZ_JJLL01000013.1 Protein Homology CDS 3191 4156 . - 0 ID=cds-WP_001575754.1;Parent=gene-AD11_RS00370;Dbxref=GenBank:WP_001575754.1;Name=WP_001575754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575754.1;locus_tag=AD11_RS00370;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_001575754.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 4164 5234 . - . ID=gene-AD11_RS00375;Name=AD11_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00375;old_locus_tag=AD11_4950 NZ_JJLL01000013.1 Protein Homology CDS 4164 5234 . - 0 ID=cds-WP_033864968.1;Parent=gene-AD11_RS00375;Dbxref=GenBank:WP_033864968.1;Name=WP_033864968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575753.1;locus_tag=AD11_RS00375;product=type II secretion system F family protein;protein_id=WP_033864968.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 5227 6846 . - . ID=gene-AD11_RS00380;Name=AD11_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00380;old_locus_tag=AD11_4951 NZ_JJLL01000013.1 Protein Homology CDS 5227 6846 . - 0 ID=cds-WP_001575752.1;Parent=gene-AD11_RS00380;Dbxref=GenBank:WP_001575752.1;Name=WP_001575752.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575752.1;locus_tag=AD11_RS00380;product=GspE/PulE family protein;protein_id=WP_001575752.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 6861 7292 . - . ID=gene-AD11_RS00385;Name=AD11_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00385;old_locus_tag=AD11_4952 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 6861 7292 . - 0 ID=cds-WP_032250286.1;Parent=gene-AD11_RS00385;Dbxref=GenBank:WP_032250286.1;Name=WP_032250286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS00385;product=hypothetical protein;protein_id=WP_032250286.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 7289 8554 . - . ID=gene-AD11_RS00390;Name=AD11_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00390;old_locus_tag=AD11_4953 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 7289 8554 . - 0 ID=cds-WP_033864969.1;Parent=gene-AD11_RS00390;Dbxref=GenBank:WP_033864969.1;Name=WP_033864969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS00390;product=type 4b pilus protein PilO2;protein_id=WP_033864969.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 8556 10226 . - . ID=gene-AD11_RS00395;Name=AD11_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00395;old_locus_tag=AD11_4954 NZ_JJLL01000013.1 Protein Homology CDS 8556 10226 . - 0 ID=cds-WP_033864970.1;Parent=gene-AD11_RS00395;Dbxref=GenBank:WP_033864970.1;Name=WP_033864970.1;Ontology_term=GO:0009297,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575747.1;locus_tag=AD11_RS00395;product=secretin N-terminal domain-containing protein;protein_id=WP_033864970.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 10239 10886 . - . ID=gene-AD11_RS00400;Name=AD11_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00400 NZ_JJLL01000013.1 Protein Homology CDS 10239 10886 . - 0 ID=cds-WP_033864971.1;Parent=gene-AD11_RS00400;Dbxref=GenBank:WP_033864971.1;Name=WP_033864971.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022136.6;locus_tag=AD11_RS00400;product=TcpQ domain-containing protein;protein_id=WP_033864971.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 10936 11601 . - . ID=gene-AD11_RS00405;Name=AD11_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00405 NZ_JJLL01000013.1 Protein Homology CDS 10936 11601 . - 0 ID=cds-WP_349251406.1;Parent=gene-AD11_RS00405;Dbxref=GenBank:WP_349251406.1;Name=WP_349251406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575744.1;locus_tag=AD11_RS00405;product=type 4 pilus major pilin;protein_id=WP_349251406.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 11729 12595 . + . ID=gene-AD11_RS00410;Name=AD11_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00410;old_locus_tag=AD11_4955 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 11729 12595 . + 0 ID=cds-WP_033866152.1;Parent=gene-AD11_RS00410;Dbxref=GenBank:WP_033866152.1;Name=WP_033866152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS00410;product=hypothetical protein;protein_id=WP_033866152.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 12585 13112 . + . ID=gene-AD11_RS00415;Name=AD11_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00415;old_locus_tag=AD11_4956 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 12585 13112 . + 0 ID=cds-WP_033864973.1;Parent=gene-AD11_RS00415;Dbxref=GenBank:WP_033864973.1;Name=WP_033864973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS00415;product=hypothetical protein;protein_id=WP_033864973.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 13118 13534 . + . ID=gene-AD11_RS00420;Name=AD11_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00420 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 13118 13534 . + 0 ID=cds-WP_033864974.1;Parent=gene-AD11_RS00420;Dbxref=GenBank:WP_033864974.1;Name=WP_033864974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS00420;product=hypothetical protein;protein_id=WP_033864974.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 13531 14052 . + . ID=gene-AD11_RS00425;Name=AD11_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00425 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 13531 14052 . + 0 ID=cds-WP_033864975.1;Parent=gene-AD11_RS00425;Dbxref=GenBank:WP_033864975.1;Name=WP_033864975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS00425;product=type II secretion system protein;protein_id=WP_033864975.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 14243 14572 . + . ID=gene-AD11_RS31875;Name=AD11_RS31875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31875;old_locus_tag=AD11_4958 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 14243 14572 . + 0 ID=cds-WP_187439448.1;Parent=gene-AD11_RS31875;Dbxref=GenBank:WP_187439448.1;Name=WP_187439448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS31875;product=hypothetical protein;protein_id=WP_187439448.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 14868 15050 . + . ID=gene-AD11_RS00435;Name=AD11_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00435 NZ_JJLL01000013.1 GeneMarkS-2+ CDS 14868 15050 . + 0 ID=cds-WP_033864977.1;Parent=gene-AD11_RS00435;Dbxref=GenBank:WP_033864977.1;Name=WP_033864977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS00435;product=hypothetical protein;protein_id=WP_033864977.1;transl_table=11 NZ_JJLL01000013.1 RefSeq pseudogene 15035 15226 . - . ID=gene-AD11_RS32300;Name=AD11_RS32300;end_range=15226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32300;partial=true;pseudo=true NZ_JJLL01000013.1 Protein Homology CDS 15035 15226 . - 0 ID=cds-AD11_RS32300;Parent=gene-AD11_RS32300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AD11_RS32300;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000013.1 RefSeq pseudogene 15352 15456 . - . ID=gene-AD11_RS32305;Name=AD11_RS32305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32305;partial=true;pseudo=true;start_range=.,15352 NZ_JJLL01000013.1 Protein Homology CDS 15352 15456 . - 0 ID=cds-AD11_RS32305;Parent=gene-AD11_RS32305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=AD11_RS32305;partial=true;product=hypothetical protein;pseudo=true;start_range=.,15352;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 15644 16171 . + . ID=gene-AD11_RS00440;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AD11_RS00440;old_locus_tag=AD11_4959 NZ_JJLL01000013.1 Protein Homology CDS 15644 16171 . + 0 ID=cds-WP_033864978.1;Parent=gene-AD11_RS00440;Dbxref=GenBank:WP_033864978.1;Name=WP_033864978.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455977.1;locus_tag=AD11_RS00440;product=superoxide dismutase family protein;protein_id=WP_033864978.1;transl_table=11 NZ_JJLL01000013.1 RefSeq gene 16494 17656 . + . ID=gene-AD11_RS00450;Name=AD11_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00450;old_locus_tag=AD11_4961 NZ_JJLL01000013.1 Protein Homology CDS 16494 16755 . + 0 ID=cds-WP_103852365.1;Parent=gene-AD11_RS00450;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS00450;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000013.1 Protein Homology CDS 16755 17656 . + 2 ID=cds-WP_103852365.1;Parent=gene-AD11_RS00450;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS00450;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 ##sequence-region NZ_JJLL01000014.1 1 5322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000014.1 RefSeq region 1 5322 . + . ID=NZ_JJLL01000014.1:1..5322;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000014.1 RefSeq gene 64 768 . + . ID=gene-AD11_RS00455;Name=AD11_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00455;old_locus_tag=AD11_4962 NZ_JJLL01000014.1 Protein Homology CDS 64 768 . + 0 ID=cds-WP_001067855.1;Parent=gene-AD11_RS00455;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS00455;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_JJLL01000014.1 RefSeq gene 929 1693 . + . ID=gene-AD11_RS00460;Name=AD11_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00460 NZ_JJLL01000014.1 Protein Homology CDS 929 1693 . + 0 ID=cds-WP_001389365.1;Parent=gene-AD11_RS00460;Dbxref=GenBank:WP_001389365.1;Name=WP_001389365.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1;locus_tag=AD11_RS00460;product=IS6-like element IS6100 family transposase;protein_id=WP_001389365.1;transl_table=11 NZ_JJLL01000014.1 RefSeq gene 2186 2770 . - . ID=gene-AD11_RS00470;Name=mphR(A);gbkey=Gene;gene=mphR(A);gene_biotype=protein_coding;locus_tag=AD11_RS00470;old_locus_tag=AD11_4964 NZ_JJLL01000014.1 Protein Homology CDS 2186 2770 . - 0 ID=cds-WP_001137892.1;Parent=gene-AD11_RS00470;Dbxref=GenBank:WP_001137892.1;Name=WP_001137892.1;gbkey=CDS;gene=mphR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137892.1;locus_tag=AD11_RS00470;product=macrolide-binding transcriptional repressor MphR(A);protein_id=WP_001137892.1;transl_table=11 NZ_JJLL01000014.1 RefSeq gene 2770 4008 . - . ID=gene-AD11_RS00475;Name=mrx(A);gbkey=Gene;gene=mrx(A);gene_biotype=protein_coding;gene_synonym=mrx;locus_tag=AD11_RS00475;old_locus_tag=AD11_4965 NZ_JJLL01000014.1 Protein Homology CDS 2770 4008 . - 0 ID=cds-WP_000004159.1;Parent=gene-AD11_RS00475;Dbxref=GenBank:WP_000004159.1;Name=WP_000004159.1;gbkey=CDS;gene=mrx(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004159.1;locus_tag=AD11_RS00475;product=macrolide resistance MFS transporter Mrx(A);protein_id=WP_000004159.1;transl_table=11 NZ_JJLL01000014.1 RefSeq gene 4005 4910 . - . ID=gene-AD11_RS00480;Name=AD11_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00480 NZ_JJLL01000014.1 Protein Homology CDS 4005 4910 . - 0 ID=cds-WP_000219391.1;Parent=gene-AD11_RS00480;Dbxref=GenBank:WP_000219391.1;Name=WP_000219391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219391.1;locus_tag=AD11_RS00480;product=Mph(A) family macrolide 2'-phosphotransferase;protein_id=WP_000219391.1;transl_table=11 NZ_JJLL01000014.1 RefSeq pseudogene 5032 5322 . - . ID=gene-AD11_RS00485;Name=AD11_RS00485;end_range=5322,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00485;old_locus_tag=AD11_4967;partial=true;pseudo=true NZ_JJLL01000014.1 Protein Homology CDS 5032 5322 . - 0 ID=cds-AD11_RS00485;Parent=gene-AD11_RS00485;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5322,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS00485;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000015.1 1 2510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000015.1 RefSeq region 1 2510 . + . ID=NZ_JJLL01000015.1:1..2510;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000015.1 RefSeq gene 1 338 . - . ID=gene-AD11_RS00490;Name=AD11_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00490;old_locus_tag=AD11_4968;partial=true;start_range=.,1 NZ_JJLL01000015.1 Protein Homology CDS 1 338 . - 0 ID=cds-WP_032189910.1-2;Parent=gene-AD11_RS00490;Dbxref=GenBank:WP_032189910.1;Name=WP_032189910.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309824.1;locus_tag=AD11_RS00490;partial=true;product=phage head closure protein;protein_id=WP_032189910.1;start_range=.,1;transl_table=11 NZ_JJLL01000015.1 RefSeq gene 348 674 . - . ID=gene-AD11_RS00495;Name=AD11_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00495;old_locus_tag=AD11_4969 NZ_JJLL01000015.1 Protein Homology CDS 348 674 . - 0 ID=cds-WP_000125998.1;Parent=gene-AD11_RS00495;Dbxref=GenBank:WP_000125998.1;Name=WP_000125998.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310003.1;locus_tag=AD11_RS00495;product=head-tail connector protein;protein_id=WP_000125998.1;transl_table=11 NZ_JJLL01000015.1 RefSeq pseudogene 671 2510 . - . ID=gene-AD11_RS27805;Name=AD11_RS27805;end_range=2510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27805;partial=true;pseudo=true NZ_JJLL01000015.1 Protein Homology CDS 671 2510 . - 2 ID=cds-AD11_RS27805;Parent=gene-AD11_RS27805;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=2510,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365916.1;locus_tag=AD11_RS27805;partial=true;product=phage portal protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000016.1 1 1307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000016.1 RefSeq region 1 1307 . + . ID=NZ_JJLL01000016.1:1..1307;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000016.1 RefSeq gene 1 404 . + . ID=gene-AD11_RS00510;Name=AD11_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00510;old_locus_tag=AD11_4972;partial=true;start_range=.,1 NZ_JJLL01000016.1 Protein Homology CDS 1 404 . + 2 ID=cds-WP_033866159.1;Parent=gene-AD11_RS00510;Dbxref=GenBank:WP_033866159.1;Name=WP_033866159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309570.1;locus_tag=AD11_RS00510;partial=true;product=phage major capsid protein;protein_id=WP_033866159.1;start_range=.,1;transl_table=11 NZ_JJLL01000016.1 RefSeq gene 449 670 . + . ID=gene-AD11_RS00515;Name=AD11_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00515;old_locus_tag=AD11_4973 NZ_JJLL01000016.1 Protein Homology CDS 449 670 . + 0 ID=cds-WP_001063027.1;Parent=gene-AD11_RS00515;Dbxref=GenBank:WP_001063027.1;Name=WP_001063027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063105.1;locus_tag=AD11_RS00515;product=hypothetical protein;protein_id=WP_001063027.1;transl_table=11 NZ_JJLL01000016.1 RefSeq gene 616 1307 . + . ID=gene-AD11_RS00520;Name=AD11_RS00520;end_range=1307,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00520;old_locus_tag=AD11_4974;partial=true NZ_JJLL01000016.1 Protein Homology CDS 616 1307 . + 0 ID=cds-WP_033866161.1;Parent=gene-AD11_RS00520;Dbxref=GenBank:WP_033866161.1;Name=WP_033866161.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;end_range=1307,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309571.1;locus_tag=AD11_RS00520;partial=true;product=phage portal protein;protein_id=WP_033866161.1;transl_table=11 ##sequence-region NZ_JJLL01000017.1 1 3193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000017.1 RefSeq region 1 3193 . + . ID=NZ_JJLL01000017.1:1..3193;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000017.1 RefSeq gene 1 1565 . + . ID=gene-AD11_RS00525;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AD11_RS00525;old_locus_tag=AD11_4975;partial=true;start_range=.,1 NZ_JJLL01000017.1 Protein Homology CDS 1 1565 . + 2 ID=cds-WP_064735373.1;Parent=gene-AD11_RS00525;Dbxref=GenBank:WP_064735373.1;Name=WP_064735373.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AD11_RS00525;partial=true;product=IS66 family transposase;protein_id=WP_064735373.1;start_range=.,1;transl_table=11 NZ_JJLL01000017.1 RefSeq pseudogene 1977 2099 . + . ID=gene-AD11_RS00530;Name=AD11_RS00530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00530;old_locus_tag=AD11_4976;partial=true;pseudo=true;start_range=.,1977 NZ_JJLL01000017.1 Protein Homology CDS 1977 2099 . + 0 ID=cds-AD11_RS00530;Parent=gene-AD11_RS00530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245074.1;locus_tag=AD11_RS00530;partial=true;product=Hha/YmoA family nucleoid-associated regulatory protein;pseudo=true;start_range=.,1977;transl_table=11 NZ_JJLL01000017.1 RefSeq pseudogene 2443 2639 . - . ID=gene-AD11_RS32310;Name=AD11_RS32310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32310;old_locus_tag=AD11_4977;pseudo=true NZ_JJLL01000017.1 Protein Homology CDS 2443 2639 . - 0 ID=cds-AD11_RS32310;Parent=gene-AD11_RS32310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547002.1;locus_tag=AD11_RS32310;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000017.1 RefSeq gene 2815 3193 . + . ID=gene-AD11_RS00540;Name=AD11_RS00540;end_range=3193,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00540;old_locus_tag=AD11_4978;partial=true NZ_JJLL01000017.1 Protein Homology CDS 2815 3193 . + 0 ID=cds-WP_033866162.1;Parent=gene-AD11_RS00540;Dbxref=GenBank:WP_033866162.1;Name=WP_033866162.1;end_range=3193,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000221568.1;locus_tag=AD11_RS00540;partial=true;product=YagK/YfjJ domain-containing protein;protein_id=WP_033866162.1;transl_table=11 ##sequence-region NZ_JJLL01000018.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000018.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000018.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000018.1 RefSeq gene 1 728 . + . ID=gene-AD11_RS00545;Name=AD11_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00545;old_locus_tag=AD11_4979;partial=true;start_range=.,1 NZ_JJLL01000018.1 Protein Homology CDS 1 728 . + 2 ID=cds-WP_032170472.1;Parent=gene-AD11_RS00545;Dbxref=GenBank:WP_032170472.1;Name=WP_032170472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AD11_RS00545;partial=true;product=MGH1-like glycoside hydrolase domain-containing protein;protein_id=WP_032170472.1;start_range=.,1;transl_table=11 NZ_JJLL01000018.1 RefSeq pseudogene 1154 2047 . + . ID=gene-AD11_RS00550;Name=fadH;end_range=2047,.;gbkey=Gene;gene=fadH;gene_biotype=pseudogene;locus_tag=AD11_RS00550;old_locus_tag=AD11_4981;partial=true;pseudo=true NZ_JJLL01000018.1 Protein Homology CDS 1154 2047 . + 0 ID=cds-AD11_RS00550;Parent=gene-AD11_RS00550;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417552.1;locus_tag=AD11_RS00550;partial=true;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000019.1 1 831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000019.1 RefSeq region 1 831 . + . ID=NZ_JJLL01000019.1:1..831;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000019.1 RefSeq gene 1 227 . - . ID=gene-AD11_RS00555;Name=AD11_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00555;old_locus_tag=AD11_4982;partial=true;start_range=.,1 NZ_JJLL01000019.1 Protein Homology CDS 1 227 . - 0 ID=cds-WP_033866164.1;Parent=gene-AD11_RS00555;Dbxref=GenBank:WP_033866164.1;Name=WP_033866164.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS00555;partial=true;product=transposase;protein_id=WP_033866164.1;start_range=.,1;transl_table=11 NZ_JJLL01000019.1 RefSeq pseudogene 278 436 . + . ID=gene-AD11_RS00560;Name=AD11_RS00560;end_range=436,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00560;old_locus_tag=AD11_4983;partial=true;pseudo=true;start_range=.,278 NZ_JJLL01000019.1 Protein Homology CDS 278 436 . + 0 ID=cds-AD11_RS00560;Parent=gene-AD11_RS00560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=436,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013051177.1;locus_tag=AD11_RS00560;partial=true;product=transposase;pseudo=true;start_range=.,278;transl_table=11 NZ_JJLL01000019.1 RefSeq pseudogene 523 831 . + . ID=gene-AD11_RS27825;Name=AD11_RS27825;end_range=831,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27825;old_locus_tag=AD11_4984;partial=true;pseudo=true NZ_JJLL01000019.1 Protein Homology CDS 523 831 . + 0 ID=cds-AD11_RS27825;Parent=gene-AD11_RS27825;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=AD11_RS27825;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000020.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000020.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000020.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000020.1 RefSeq gene 1 1483 . + . ID=gene-AD11_RS00565;Name=AD11_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00565;partial=true;start_range=.,1 NZ_JJLL01000020.1 Protein Homology CDS 1 1483 . + 1 ID=cds-WP_033866166.1;Parent=gene-AD11_RS00565;Dbxref=GenBank:WP_033866166.1;Name=WP_033866166.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AD11_RS00565;partial=true;product=flotillin family protein;protein_id=WP_033866166.1;start_range=.,1;transl_table=11 NZ_JJLL01000020.1 RefSeq gene 1722 1781 . + . ID=gene-AD11_RS31165;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AD11_RS31165 NZ_JJLL01000020.1 Protein Homology CDS 1722 1781 . + 0 ID=cds-WP_001387082.1;Parent=gene-AD11_RS31165;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AD11_RS31165;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11 NZ_JJLL01000020.1 RefSeq pseudogene 1901 2047 . - . ID=gene-AD11_RS30305;Name=AD11_RS30305;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30305;old_locus_tag=AD11_4986;partial=true;pseudo=true NZ_JJLL01000020.1 Protein Homology CDS 1901 2047 . - 0 ID=cds-AD11_RS30305;Parent=gene-AD11_RS30305;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311962.1;locus_tag=AD11_RS30305;partial=true;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000021.1 1 460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000021.1 RefSeq region 1 460 . + . ID=NZ_JJLL01000021.1:1..460;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000021.1 RefSeq pseudogene 1 460 . - . ID=gene-AD11_RS00575;Name=AD11_RS00575;end_range=460,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00575;old_locus_tag=AD11_4987;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000021.1 Protein Homology CDS 1 460 . - 0 ID=cds-AD11_RS00575;Parent=gene-AD11_RS00575;Note=frameshifted%3B internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=460,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612026.1;locus_tag=AD11_RS00575;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000022.1 1 5460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000022.1 RefSeq region 1 5460 . + . ID=NZ_JJLL01000022.1:1..5460;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000022.1 RefSeq gene 1 465 . + . ID=gene-AD11_RS00585;Name=AD11_RS00585;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS00585;partial=true;start_range=.,1 NZ_JJLL01000022.1 cmsearch rRNA 1 465 . + . ID=rna-AD11_RS00585;Parent=gene-AD11_RS00585;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00585;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000022.1 cmsearch exon 1 465 . + . ID=exon-AD11_RS00585-1;Parent=rna-AD11_RS00585;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00585;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000022.1 RefSeq gene 560 675 . + . ID=gene-AD11_RS00590;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS00590;old_locus_tag=AD11_4990 NZ_JJLL01000022.1 cmsearch rRNA 560 675 . + . ID=rna-AD11_RS00590;Parent=gene-AD11_RS00590;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00590;product=5S ribosomal RNA NZ_JJLL01000022.1 cmsearch exon 560 675 . + . ID=exon-AD11_RS00590-1;Parent=rna-AD11_RS00590;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS00590;product=5S ribosomal RNA NZ_JJLL01000022.1 RefSeq gene 978 2006 . + . ID=gene-AD11_RS00595;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AD11_RS00595;old_locus_tag=AD11_4991 NZ_JJLL01000022.1 Protein Homology CDS 978 2006 . + 0 ID=cds-WP_001016674.1;Parent=gene-AD11_RS00595;Dbxref=GenBank:WP_001016674.1;Name=WP_001016674.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312926.1;locus_tag=AD11_RS00595;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016674.1;transl_table=11 NZ_JJLL01000022.1 RefSeq gene 2003 2968 . + . ID=gene-AD11_RS00600;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AD11_RS00600;old_locus_tag=AD11_4992 NZ_JJLL01000022.1 Protein Homology CDS 2003 2968 . + 0 ID=cds-WP_000654620.1;Parent=gene-AD11_RS00600;Dbxref=GenBank:WP_000654620.1;Name=WP_000654620.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=AD11_RS00600;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000654620.1;transl_table=11 NZ_JJLL01000022.1 RefSeq gene 2997 3947 . - . ID=gene-AD11_RS00605;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AD11_RS00605;old_locus_tag=AD11_4993 NZ_JJLL01000022.1 Protein Homology CDS 2997 3947 . - 0 ID=cds-WP_000023081.1;Parent=gene-AD11_RS00605;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AD11_RS00605;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JJLL01000022.1 RefSeq gene 4309 4384 . + . ID=gene-AD11_RS00615;Name=AD11_RS00615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS00615;old_locus_tag=AD11_4995 NZ_JJLL01000022.1 tRNAscan-SE tRNA 4309 4384 . + . ID=rna-AD11_RS00615;Parent=gene-AD11_RS00615;anticodon=(pos:4342..4344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00615;product=tRNA-Thr NZ_JJLL01000022.1 tRNAscan-SE exon 4309 4384 . + . ID=exon-AD11_RS00615-1;Parent=rna-AD11_RS00615;anticodon=(pos:4342..4344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00615;product=tRNA-Thr NZ_JJLL01000022.1 RefSeq gene 4393 4477 . + . ID=gene-AD11_RS00620;Name=AD11_RS00620;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS00620;old_locus_tag=AD11_4996 NZ_JJLL01000022.1 tRNAscan-SE tRNA 4393 4477 . + . ID=rna-AD11_RS00620;Parent=gene-AD11_RS00620;anticodon=(pos:4427..4429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00620;product=tRNA-Tyr NZ_JJLL01000022.1 tRNAscan-SE exon 4393 4477 . + . ID=exon-AD11_RS00620-1;Parent=rna-AD11_RS00620;anticodon=(pos:4427..4429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00620;product=tRNA-Tyr NZ_JJLL01000022.1 RefSeq gene 4594 4668 . + . ID=gene-AD11_RS00625;Name=AD11_RS00625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS00625;old_locus_tag=AD11_4997 NZ_JJLL01000022.1 tRNAscan-SE tRNA 4594 4668 . + . ID=rna-AD11_RS00625;Parent=gene-AD11_RS00625;anticodon=(pos:4627..4629);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00625;product=tRNA-Gly NZ_JJLL01000022.1 tRNAscan-SE exon 4594 4668 . + . ID=exon-AD11_RS00625-1;Parent=rna-AD11_RS00625;anticodon=(pos:4627..4629);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00625;product=tRNA-Gly NZ_JJLL01000022.1 RefSeq gene 4675 4750 . + . ID=gene-AD11_RS00630;Name=AD11_RS00630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS00630;old_locus_tag=AD11_4998 NZ_JJLL01000022.1 tRNAscan-SE tRNA 4675 4750 . + . ID=rna-AD11_RS00630;Parent=gene-AD11_RS00630;anticodon=(pos:4708..4710);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00630;product=tRNA-Thr NZ_JJLL01000022.1 tRNAscan-SE exon 4675 4750 . + . ID=exon-AD11_RS00630-1;Parent=rna-AD11_RS00630;anticodon=(pos:4708..4710);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS00630;product=tRNA-Thr NZ_JJLL01000022.1 RefSeq gene 4865 5460 . + . ID=gene-AD11_RS00635;Name=AD11_RS00635;end_range=5460,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00635;old_locus_tag=AD11_4999;partial=true NZ_JJLL01000022.1 Protein Homology CDS 4865 5460 . + 0 ID=cds-WP_000031754.1;Parent=gene-AD11_RS00635;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;end_range=5460,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AD11_RS00635;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;transl_table=11 ##sequence-region NZ_JJLL01000023.1 1 6736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000023.1 RefSeq region 1 6736 . + . ID=NZ_JJLL01000023.1:1..6736;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000023.1 RefSeq gene 1 758 . - . ID=gene-AD11_RS00640;Name=AD11_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00640;old_locus_tag=AD11_5000;partial=true;start_range=.,1 NZ_JJLL01000023.1 Protein Homology CDS 1 758 . - 0 ID=cds-WP_033866169.1;Parent=gene-AD11_RS00640;Dbxref=GenBank:WP_033866169.1;Name=WP_033866169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708768.1;locus_tag=AD11_RS00640;partial=true;product=DUF932 domain-containing protein;protein_id=WP_033866169.1;start_range=.,1;transl_table=11 NZ_JJLL01000023.1 RefSeq gene 937 1068 . - . ID=gene-AD11_RS32315;Name=AD11_RS32315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32315 NZ_JJLL01000023.1 Protein Homology CDS 937 1068 . - 0 ID=cds-WP_106108514.1;Parent=gene-AD11_RS32315;Dbxref=GenBank:WP_106108514.1;Name=WP_106108514.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017787.6;locus_tag=AD11_RS32315;product=DUF905 family protein;protein_id=WP_106108514.1;transl_table=11 NZ_JJLL01000023.1 RefSeq gene 1169 1624 . - . ID=gene-AD11_RS00650;Name=AD11_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00650;old_locus_tag=AD11_5003 NZ_JJLL01000023.1 Protein Homology CDS 1169 1624 . - 0 ID=cds-WP_000581502.1;Parent=gene-AD11_RS00650;Dbxref=GenBank:WP_000581502.1;Name=WP_000581502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708767.1;locus_tag=AD11_RS00650;product=IrmA family protein;protein_id=WP_000581502.1;transl_table=11 NZ_JJLL01000023.1 RefSeq gene 1700 4216 . - . ID=gene-AD11_RS00655;Name=AD11_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00655;old_locus_tag=AD11_5004 NZ_JJLL01000023.1 Protein Homology CDS 1700 4216 . - 0 ID=cds-WP_033866170.1;Parent=gene-AD11_RS00655;Dbxref=GenBank:WP_033866170.1;Name=WP_033866170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708766.2;locus_tag=AD11_RS00655;product=hypothetical protein;protein_id=WP_033866170.1;transl_table=11 NZ_JJLL01000023.1 RefSeq gene 4271 5884 . - . ID=gene-AD11_RS00660;Name=AD11_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00660;old_locus_tag=AD11_5005 NZ_JJLL01000023.1 Protein Homology CDS 4271 5884 . - 0 ID=cds-WP_000080200.1-2;Parent=gene-AD11_RS00660;Dbxref=GenBank:WP_000080200.1;Name=WP_000080200.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AD11_RS00660;product=IS66-like element ISEc23 family transposase;protein_id=WP_000080200.1;transl_table=11 NZ_JJLL01000023.1 RefSeq gene 5915 6265 . - . ID=gene-AD11_RS00665;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS00665;old_locus_tag=AD11_5006 NZ_JJLL01000023.1 Protein Homology CDS 5915 6265 . - 0 ID=cds-WP_000624722.1-2;Parent=gene-AD11_RS00665;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD11_RS00665;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLL01000023.1 RefSeq gene 6262 6687 . - . ID=gene-AD11_RS00670;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS00670;old_locus_tag=AD11_5007 NZ_JJLL01000023.1 Protein Homology CDS 6262 6687 . - 0 ID=cds-WP_000422741.1-2;Parent=gene-AD11_RS00670;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD11_RS00670;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 ##sequence-region NZ_JJLL01000024.1 1 5948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000024.1 RefSeq region 1 5948 . + . ID=NZ_JJLL01000024.1:1..5948;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000024.1 RefSeq gene 64 768 . + . ID=gene-AD11_RS00675;Name=AD11_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00675;old_locus_tag=AD11_5008 NZ_JJLL01000024.1 Protein Homology CDS 64 768 . + 0 ID=cds-WP_001067855.1-2;Parent=gene-AD11_RS00675;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS00675;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_JJLL01000024.1 RefSeq pseudogene 813 929 . - . ID=gene-AD11_RS33090;Name=AD11_RS33090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33090;partial=true;pseudo=true;start_range=.,813 NZ_JJLL01000024.1 Protein Homology CDS 813 929 . - 0 ID=cds-AD11_RS33090;Parent=gene-AD11_RS33090;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000993245.1;locus_tag=AD11_RS33090;partial=true;product=DUF3330 domain-containing protein;pseudo=true;start_range=.,813;transl_table=11 NZ_JJLL01000024.1 RefSeq pseudogene 1029 1313 . - . ID=gene-AD11_RS33095;Name=AD11_RS33095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33095;partial=true;pseudo=true;start_range=.,1029 NZ_JJLL01000024.1 Protein Homology CDS 1029 1313 . - 0 ID=cds-AD11_RS33095;Parent=gene-AD11_RS33095;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=AD11_RS33095;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1029;transl_table=11 NZ_JJLL01000024.1 RefSeq gene 1282 2295 . - . ID=gene-AD11_RS00690;Name=intI1;gbkey=Gene;gene=intI1;gene_biotype=protein_coding;locus_tag=AD11_RS00690;old_locus_tag=AD11_5009 NZ_JJLL01000024.1 Protein Homology CDS 1282 2295 . - 0 ID=cds-WP_000845039.1;Parent=gene-AD11_RS00690;Dbxref=GenBank:WP_000845039.1;Name=WP_000845039.1;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012077405.1;locus_tag=AD11_RS00690;product=class 1 integron integrase IntI1;protein_id=WP_000845039.1;transl_table=11 NZ_JJLL01000024.1 RefSeq gene 2440 2937 . + . ID=gene-AD11_RS00695;Name=dfrA12;gbkey=Gene;gene=dfrA12;gene_biotype=protein_coding;locus_tag=AD11_RS00695 NZ_JJLL01000024.1 Protein Homology CDS 2440 2937 . + 0 ID=cds-WP_001083725.1;Parent=gene-AD11_RS00695;Dbxref=GenBank:WP_001083725.1;Name=WP_001083725.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA12;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187529.1;locus_tag=AD11_RS00695;product=trimethoprim-resistant dihydrofolate reductase DfrA12;protein_id=WP_001083725.1;transl_table=11 NZ_JJLL01000024.1 RefSeq gene 3049 3339 . + . ID=gene-AD11_RS31180;Name=AD11_RS31180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31180 NZ_JJLL01000024.1 Protein Homology CDS 3049 3339 . + 0 ID=cds-WP_001336345.1;Parent=gene-AD11_RS31180;Dbxref=GenBank:WP_001336345.1;Name=WP_001336345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017990.6;locus_tag=AD11_RS31180;product=DUF1010 domain-containing protein;protein_id=WP_001336345.1;transl_table=11 NZ_JJLL01000024.1 RefSeq pseudogene 3345 4183 . + . ID=gene-AD11_RS00700;Name=AD11_RS00700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00700;old_locus_tag=AD11_5011;pseudo=true NZ_JJLL01000024.1 Protein Homology CDS 3345 4183 . + 0 ID=cds-AD11_RS00700;Parent=gene-AD11_RS00700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048608579.1;locus_tag=AD11_RS00700;product=AadA family aminoglycoside 3''-O-nucleotidyltransferase;pseudo=true;transl_table=11 NZ_JJLL01000024.1 RefSeq gene 4300 4647 . + . ID=gene-AD11_RS00705;Name=AD11_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00705 NZ_JJLL01000024.1 Protein Homology CDS 4300 4647 . + 0 ID=cds-WP_000679427.1;Parent=gene-AD11_RS00705;Dbxref=GenBank:WP_000679427.1;Name=WP_000679427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=AD11_RS00705;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=WP_000679427.1;transl_table=11 NZ_JJLL01000024.1 RefSeq gene 4641 5480 . + . ID=gene-AD11_RS00710;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=AD11_RS00710;old_locus_tag=AD11_5012 NZ_JJLL01000024.1 Protein Homology CDS 4641 5480 . + 0 ID=cds-WP_000259031.1;Parent=gene-AD11_RS00710;Dbxref=GenBank:WP_000259031.1;Name=WP_000259031.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=AD11_RS00710;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=WP_000259031.1;transl_table=11 NZ_JJLL01000024.1 RefSeq pseudogene 5725 5948 . + . ID=gene-AD11_RS30325;Name=AD11_RS30325;end_range=5948,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30325;old_locus_tag=AD11_5013;partial=true;pseudo=true NZ_JJLL01000024.1 Protein Homology CDS 5725 5948 . + 0 ID=cds-AD11_RS30325;Parent=gene-AD11_RS30325;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5948,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS30325;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000025.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000025.1 RefSeq region 1 334 . + . ID=NZ_JJLL01000025.1:1..334;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000025.1 RefSeq pseudogene 1 234 . - . ID=gene-AD11_RS00720;Name=AD11_RS00720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00720;old_locus_tag=AD11_5014;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000025.1 Protein Homology CDS 1 234 . - 0 ID=cds-AD11_RS00720;Parent=gene-AD11_RS00720;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001409629.1;locus_tag=AD11_RS00720;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000026.1 1 5717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000026.1 RefSeq region 1 5717 . + . ID=NZ_JJLL01000026.1:1..5717;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000026.1 RefSeq gene 28 732 . - . ID=gene-AD11_RS00725;Name=AD11_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00725;old_locus_tag=AD11_5015 NZ_JJLL01000026.1 Protein Homology CDS 28 732 . - 0 ID=cds-WP_001067855.1-3;Parent=gene-AD11_RS00725;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS00725;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 NZ_JJLL01000026.1 RefSeq pseudogene 796 2220 . - . ID=gene-AD11_RS00730;Name=AD11_RS00730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00730;old_locus_tag=AD11_5016;partial=true;pseudo=true;start_range=.,796 NZ_JJLL01000026.1 Protein Homology CDS 796 2220 . - 0 ID=cds-AD11_RS00730;Parent=gene-AD11_RS00730;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612398.1;locus_tag=AD11_RS00730;partial=true;product=Tn3-like element Tn5403 family transposase;pseudo=true;start_range=.,796;transl_table=11 NZ_JJLL01000026.1 RefSeq gene 2315 2920 . + . ID=gene-AD11_RS00735;Name=AD11_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00735;old_locus_tag=AD11_5017 NZ_JJLL01000026.1 Protein Homology CDS 2315 2920 . + 0 ID=cds-WP_000509965.1;Parent=gene-AD11_RS00735;Dbxref=GenBank:WP_000509965.1;Name=WP_000509965.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549957.1;locus_tag=AD11_RS00735;product=recombinase family protein;protein_id=WP_000509965.1;transl_table=11 NZ_JJLL01000026.1 RefSeq pseudogene 2953 4908 . - . ID=gene-AD11_RS00740;Name=AD11_RS00740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00740;old_locus_tag=AD11_5018;partial=true;pseudo=true;start_range=.,2953 NZ_JJLL01000026.1 Protein Homology CDS 2953 4908 . - 0 ID=cds-AD11_RS00740;Parent=gene-AD11_RS00740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003117273.1;locus_tag=AD11_RS00740;partial=true;product=Tn3-like element TnAs1 family transposase;pseudo=true;start_range=.,2953;transl_table=11 NZ_JJLL01000026.1 RefSeq pseudogene 4912 5337 . - . ID=gene-AD11_RS00745;Name=AD11_RS00745;end_range=5337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00745;old_locus_tag=AD11_5019;partial=true;pseudo=true NZ_JJLL01000026.1 Protein Homology CDS 4912 5337 . - 0 ID=cds-AD11_RS00745;Parent=gene-AD11_RS00745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074,GO:0000150,GO:0003677;end_range=5337,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595151.1;locus_tag=AD11_RS00745;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_JJLL01000026.1 RefSeq pseudogene 5394 5717 . + . ID=gene-AD11_RS00750;Name=AD11_RS00750;end_range=5717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00750;old_locus_tag=AD11_5020;partial=true;pseudo=true NZ_JJLL01000026.1 Protein Homology CDS 5394 5717 . + 0 ID=cds-AD11_RS00750;Parent=gene-AD11_RS00750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5717,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012472779.1;locus_tag=AD11_RS00750;partial=true;product=IS6-like element IS26 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000027.1 1 3173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000027.1 RefSeq region 1 3173 . + . ID=NZ_JJLL01000027.1:1..3173;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000027.1 RefSeq pseudogene 1 231 . + . ID=gene-AD11_RS00755;Name=AD11_RS00755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00755;old_locus_tag=AD11_5021;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000027.1 Protein Homology CDS 1 231 . + 0 ID=cds-AD11_RS00755;Parent=gene-AD11_RS00755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AD11_RS00755;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000027.1 RefSeq pseudogene 312 799 . + . ID=gene-AD11_RS00760;Name=AD11_RS00760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00760;partial=true;pseudo=true;start_range=.,312 NZ_JJLL01000027.1 Protein Homology CDS 312 799 . + 0 ID=cds-AD11_RS00760;Parent=gene-AD11_RS00760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AD11_RS00760;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,312;transl_table=11 NZ_JJLL01000027.1 RefSeq gene 882 1139 . + . ID=gene-AD11_RS31185;Name=AD11_RS31185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31185;old_locus_tag=AD11_5023 NZ_JJLL01000027.1 GeneMarkS-2+ CDS 882 1139 . + 0 ID=cds-WP_000177057.1;Parent=gene-AD11_RS31185;Dbxref=GenBank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS31185;product=hypothetical protein;protein_id=WP_000177057.1;transl_table=11 NZ_JJLL01000027.1 RefSeq gene 1306 2328 . + . ID=gene-AD11_RS00770;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AD11_RS00770;old_locus_tag=AD11_5024 NZ_JJLL01000027.1 Protein Homology CDS 1306 2328 . + 0 ID=cds-WP_000255944.1;Parent=gene-AD11_RS00770;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AD11_RS00770;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 NZ_JJLL01000027.1 RefSeq gene 2325 3107 . + . ID=gene-AD11_RS00775;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AD11_RS00775;old_locus_tag=AD11_5025 NZ_JJLL01000027.1 Protein Homology CDS 2325 3107 . + 0 ID=cds-WP_001300609.1;Parent=gene-AD11_RS00775;Dbxref=GenBank:WP_001300609.1;Name=WP_001300609.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AD11_RS00775;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001300609.1;transl_table=11 ##sequence-region NZ_JJLL01000028.1 1 8031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000028.1 RefSeq region 1 8031 . + . ID=NZ_JJLL01000028.1:1..8031;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000028.1 RefSeq gene 1 350 . - . ID=gene-AD11_RS00780;Name=AD11_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00780;old_locus_tag=AD11_5026;partial=true;start_range=.,1 NZ_JJLL01000028.1 Protein Homology CDS 1 350 . - 0 ID=cds-WP_001398921.1;Parent=gene-AD11_RS00780;Dbxref=GenBank:WP_001398921.1;Name=WP_001398921.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AD11_RS00780;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_001398921.1;start_range=.,1;transl_table=11 NZ_JJLL01000028.1 RefSeq pseudogene 436 690 . + . ID=gene-AD11_RS31190;Name=AD11_RS31190;end_range=690,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31190;partial=true;pseudo=true;start_range=.,436 NZ_JJLL01000028.1 Protein Homology CDS 436 690 . + 0 ID=cds-AD11_RS31190;Parent=gene-AD11_RS31190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952428.1;locus_tag=AD11_RS31190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,436;transl_table=11 NZ_JJLL01000028.1 RefSeq pseudogene 705 842 . + . ID=gene-AD11_RS33100;Name=AD11_RS33100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33100;partial=true;pseudo=true;start_range=.,705 NZ_JJLL01000028.1 Protein Homology CDS 705 842 . + 0 ID=cds-AD11_RS33100;Parent=gene-AD11_RS33100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AD11_RS33100;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,705;transl_table=11 NZ_JJLL01000028.1 RefSeq gene 1973 3124 . + . ID=gene-AD11_RS00795;Name=AD11_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00795;old_locus_tag=AD11_5028 NZ_JJLL01000028.1 Protein Homology CDS 1973 3124 . + 0 ID=cds-WP_000514100.1;Parent=gene-AD11_RS00795;Dbxref=GenBank:WP_000514100.1;Name=WP_000514100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514103.1;locus_tag=AD11_RS00795;product=hypothetical protein;protein_id=WP_000514100.1;transl_table=11 NZ_JJLL01000028.1 RefSeq gene 3208 4080 . + . ID=gene-AD11_RS00800;Name=AD11_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00800;old_locus_tag=AD11_5029 NZ_JJLL01000028.1 Protein Homology CDS 3208 4080 . + 0 ID=cds-WP_021528661.1;Parent=gene-AD11_RS00800;Dbxref=GenBank:WP_021528661.1;Name=WP_021528661.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708764.1;locus_tag=AD11_RS00800;product=GTPase family protein;protein_id=WP_021528661.1;transl_table=11 NZ_JJLL01000028.1 RefSeq gene 4414 7536 . + . ID=gene-AD11_RS00805;Name=agn43;gbkey=Gene;gene=agn43;gene_biotype=protein_coding;gene_synonym=flu;locus_tag=AD11_RS00805;old_locus_tag=AD11_5030 NZ_JJLL01000028.1 Protein Homology CDS 4414 7536 . + 0 ID=cds-WP_033866176.1;Parent=gene-AD11_RS00805;Dbxref=GenBank:WP_033866176.1;Name=WP_033866176.1;gbkey=CDS;gene=agn43;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AD11_RS00805;product=autotransporter adhesin Ag43;protein_id=WP_033866176.1;transl_table=11 NZ_JJLL01000028.1 RefSeq gene 7726 8031 . + . ID=gene-AD11_RS00810;Name=AD11_RS00810;end_range=8031,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00810;old_locus_tag=AD11_5031;partial=true NZ_JJLL01000028.1 Protein Homology CDS 7726 8031 . + 0 ID=cds-WP_024204918.1;Parent=gene-AD11_RS00810;Dbxref=GenBank:WP_024204918.1;Name=WP_024204918.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=8031,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001751479.1;locus_tag=AD11_RS00810;partial=true;product=transposase;protein_id=WP_024204918.1;transl_table=11 ##sequence-region NZ_JJLL01000029.1 1 2062 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000029.1 RefSeq region 1 2062 . + . ID=NZ_JJLL01000029.1:1..2062;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000029.1 RefSeq pseudogene 1 247 . - . ID=gene-AD11_RS00815;Name=AD11_RS00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00815;old_locus_tag=AD11_5032;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000029.1 Protein Homology CDS 1 247 . - 0 ID=cds-AD11_RS00815;Parent=gene-AD11_RS00815;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006939175.1;locus_tag=AD11_RS00815;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000029.1 RefSeq pseudogene 309 479 . - . ID=gene-AD11_RS27885;Name=AD11_RS27885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27885;old_locus_tag=AD11_5033;partial=true;pseudo=true;start_range=.,309 NZ_JJLL01000029.1 Protein Homology CDS 309 479 . - 0 ID=cds-AD11_RS27885;Parent=gene-AD11_RS27885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=AD11_RS27885;partial=true;product=DUF4158 domain-containing protein;pseudo=true;start_range=.,309;transl_table=11 NZ_JJLL01000029.1 RefSeq gene 482 1042 . - . ID=gene-AD11_RS00825;Name=AD11_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00825;old_locus_tag=AD11_5034 NZ_JJLL01000029.1 Protein Homology CDS 482 1042 . - 0 ID=cds-WP_000147567.1;Parent=gene-AD11_RS00825;Dbxref=GenBank:WP_000147567.1;Name=WP_000147567.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=AD11_RS00825;product=recombinase family protein;protein_id=WP_000147567.1;transl_table=11 NZ_JJLL01000029.1 RefSeq pseudogene 1168 1266 . - . ID=gene-AD11_RS27355;Name=AD11_RS27355;end_range=1266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27355;partial=true;pseudo=true NZ_JJLL01000029.1 Protein Homology CDS 1168 1266 . - 0 ID=cds-AD11_RS27355;Parent=gene-AD11_RS27355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000993264.1;locus_tag=AD11_RS27355;partial=true;product=DUF3330 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000029.1 RefSeq gene 1331 2035 . + . ID=gene-AD11_RS00830;Name=AD11_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00830;old_locus_tag=AD11_5036 NZ_JJLL01000029.1 Protein Homology CDS 1331 2035 . + 0 ID=cds-WP_001067855.1-4;Parent=gene-AD11_RS00830;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS00830;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 ##sequence-region NZ_JJLL01000030.1 1 338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000030.1 RefSeq region 1 338 . + . ID=NZ_JJLL01000030.1:1..338;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000030.1 RefSeq pseudogene 1 108 . - . ID=gene-AD11_RS32320;Name=AD11_RS32320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32320;old_locus_tag=AD11_5037;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000030.1 Protein Homology CDS 1 108 . - 0 ID=cds-AD11_RS32320;Parent=gene-AD11_RS32320;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234272.1;locus_tag=AD11_RS32320;partial=true;product=phage tail assembly protein T;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000030.1 RefSeq gene 132 338 . - . ID=gene-AD11_RS00840;Name=AD11_RS00840;end_range=338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00840;old_locus_tag=AD11_5038;partial=true NZ_JJLL01000030.1 Protein Homology CDS 132 338 . - 0 ID=cds-WP_033866178.1;Parent=gene-AD11_RS00840;Dbxref=GenBank:WP_033866178.1;Name=WP_033866178.1;end_range=338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310008.1;locus_tag=AD11_RS00840;partial=true;product=phage tail assembly chaperone;protein_id=WP_033866178.1;transl_table=11 ##sequence-region NZ_JJLL01000031.1 1 5471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000031.1 RefSeq region 1 5471 . + . ID=NZ_JJLL01000031.1:1..5471;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000031.1 RefSeq pseudogene 1 438 . - . ID=gene-AD11_RS00845;Name=AD11_RS00845;end_range=438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00845;old_locus_tag=AD11_5039;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000031.1 Protein Homology CDS 1 438 . - 0 ID=cds-AD11_RS00845;Parent=gene-AD11_RS00845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=438,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD11_RS00845;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000031.1 RefSeq gene 442 834 . + . ID=gene-AD11_RS00850;Name=AD11_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00850;old_locus_tag=AD11_5040 NZ_JJLL01000031.1 Protein Homology CDS 442 834 . + 0 ID=cds-WP_001351729.1;Parent=gene-AD11_RS00850;Dbxref=GenBank:WP_001351729.1;Name=WP_001351729.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013053.6;locus_tag=AD11_RS00850;product=cysteine hydrolase family protein;protein_id=WP_001351729.1;transl_table=11 NZ_JJLL01000031.1 RefSeq gene 972 1856 . + . ID=gene-AD11_RS00855;Name=AD11_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00855;old_locus_tag=AD11_5041 NZ_JJLL01000031.1 Protein Homology CDS 972 1856 . + 0 ID=cds-WP_000058717.1;Parent=gene-AD11_RS00855;Dbxref=GenBank:WP_000058717.1;Name=WP_000058717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058717.1;locus_tag=AD11_RS00855;product=DMT family transporter;protein_id=WP_000058717.1;transl_table=11 NZ_JJLL01000031.1 RefSeq gene 1888 3087 . - . ID=gene-AD11_RS00860;Name=tet(A);gbkey=Gene;gene=tet(A);gene_biotype=protein_coding;locus_tag=AD11_RS00860;old_locus_tag=AD11_5042 NZ_JJLL01000031.1 Protein Homology CDS 1888 3087 . - 0 ID=cds-WP_000804064.1;Parent=gene-AD11_RS00860;Dbxref=GenBank:WP_000804064.1;Name=WP_000804064.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(A);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000804064.1;locus_tag=AD11_RS00860;product=tetracycline efflux MFS transporter Tet(A);protein_id=WP_000804064.1;transl_table=11 NZ_JJLL01000031.1 RefSeq gene 3193 3843 . + . ID=gene-AD11_RS00865;Name=tetR(A);gbkey=Gene;gene=tetR(A);gene_biotype=protein_coding;locus_tag=AD11_RS00865;old_locus_tag=AD11_5043 NZ_JJLL01000031.1 Protein Homology CDS 3193 3843 . + 0 ID=cds-WP_000164043.1;Parent=gene-AD11_RS00865;Dbxref=GenBank:WP_000164043.1;Name=WP_000164043.1;gbkey=CDS;gene=tetR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164043.1;locus_tag=AD11_RS00865;product=tetracycline resistance transcriptional repressor TetR(A);protein_id=WP_000164043.1;transl_table=11 NZ_JJLL01000031.1 RefSeq pseudogene 4159 5471 . - . ID=gene-AD11_RS00875;Name=AD11_RS00875;end_range=5471,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00875;old_locus_tag=AD11_5044;partial=true;pseudo=true NZ_JJLL01000031.1 Protein Homology CDS 4159 5471 . - 2 ID=cds-AD11_RS00875;Parent=gene-AD11_RS00875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5471,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138014.1;locus_tag=AD11_RS00875;partial=true;product=Tn3-like element TnAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000032.1 1 18358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000032.1 RefSeq region 1 18358 . + . ID=NZ_JJLL01000032.1:1..18358;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000032.1 RefSeq pseudogene 1 955 . + . ID=gene-AD11_RS00880;Name=AD11_RS00880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00880;old_locus_tag=AD11_5045;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000032.1 Protein Homology CDS 1 955 . + 2 ID=cds-AD11_RS00880;Parent=gene-AD11_RS00880;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611435.1;locus_tag=AD11_RS00880;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 1068 2261 . - . ID=gene-AD11_RS00885;Name=AD11_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00885;old_locus_tag=AD11_5046 NZ_JJLL01000032.1 Protein Homology CDS 1068 2261 . - 0 ID=cds-WP_000074486.1;Parent=gene-AD11_RS00885;Dbxref=GenBank:WP_000074486.1;Name=WP_000074486.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709453.1;locus_tag=AD11_RS00885;product=MFS transporter;protein_id=WP_000074486.1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 2397 4121 . + . ID=gene-AD11_RS00890;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=AD11_RS00890;old_locus_tag=AD11_5047 NZ_JJLL01000032.1 Protein Homology CDS 2397 4121 . + 0 ID=cds-WP_002431271.1;Parent=gene-AD11_RS00890;Dbxref=GenBank:WP_002431271.1;Name=WP_002431271.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314127.1;locus_tag=AD11_RS00890;product=aerobactin synthase IucA;protein_id=WP_002431271.1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 4122 5069 . + . ID=gene-AD11_RS00895;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=AD11_RS00895;old_locus_tag=AD11_5048 NZ_JJLL01000032.1 Protein Homology CDS 4122 5069 . + 0 ID=cds-WP_001287501.1;Parent=gene-AD11_RS00895;Dbxref=GenBank:WP_001287501.1;Name=WP_001287501.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=AD11_RS00895;product=N(6)-hydroxylysine O-acetyltransferase IucB;protein_id=WP_001287501.1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 5069 6811 . + . ID=gene-AD11_RS00900;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=AD11_RS00900;old_locus_tag=AD11_5049 NZ_JJLL01000032.1 Protein Homology CDS 5069 6811 . + 0 ID=cds-WP_001015715.1;Parent=gene-AD11_RS00900;Dbxref=GenBank:WP_001015715.1;Name=WP_001015715.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AD11_RS00900;product=NIS family aerobactin synthetase IucC;protein_id=WP_001015715.1;transl_table=11 NZ_JJLL01000032.1 RefSeq pseudogene 6808 8141 . + . ID=gene-AD11_RS00905;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=pseudogene;locus_tag=AD11_RS00905;old_locus_tag=AD11_5050;pseudo=true NZ_JJLL01000032.1 Protein Homology CDS 6808 8141 . + 0 ID=cds-AD11_RS00905;Parent=gene-AD11_RS00905;Note=frameshifted;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528830.1;locus_tag=AD11_RS00905;product=NADPH-dependent L-lysine N(6)-monooxygenase IucD;pseudo=true;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 8167 10368 . + . ID=gene-AD11_RS00910;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=AD11_RS00910;old_locus_tag=AD11_5051 NZ_JJLL01000032.1 Protein Homology CDS 8167 10368 . + 0 ID=cds-WP_000973519.1;Parent=gene-AD11_RS00910;Dbxref=GenBank:WP_000973519.1;Name=WP_000973519.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213924.1;locus_tag=AD11_RS00910;product=ferric aerobactin receptor IutA;protein_id=WP_000973519.1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 10919 11062 . - . ID=gene-AD11_RS31890;Name=AD11_RS31890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31890;old_locus_tag=AD11_5052 NZ_JJLL01000032.1 Protein Homology CDS 10919 11062 . - 0 ID=cds-WP_011076574.1;Parent=gene-AD11_RS31890;Dbxref=GenBank:WP_011076574.1;Name=WP_011076574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001421454.1;locus_tag=AD11_RS31890;product=hypothetical protein;protein_id=WP_011076574.1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 11313 15200 . + . ID=gene-AD11_RS00920;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=AD11_RS00920;old_locus_tag=AD11_5053 NZ_JJLL01000032.1 Protein Homology CDS 11313 15200 . + 0 ID=cds-WP_033864944.1;Parent=gene-AD11_RS00920;Dbxref=GenBank:WP_033864944.1;Name=WP_033864944.1;gbkey=CDS;gene=sat;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001034089.1;locus_tag=AD11_RS00920;product=serine protease autotransporter toxin Sat;protein_id=WP_033864944.1;transl_table=11 NZ_JJLL01000032.1 RefSeq pseudogene 15472 15777 . + . ID=gene-AD11_RS00925;Name=AD11_RS00925;end_range=15777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00925;old_locus_tag=AD11_5055;partial=true;pseudo=true NZ_JJLL01000032.1 Protein Homology CDS 15472 15777 . + 0 ID=cds-AD11_RS00925;Parent=gene-AD11_RS00925;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=15777,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AD11_RS00925;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLL01000032.1 RefSeq pseudogene 15797 15868 . + . ID=gene-AD11_RS32330;Name=AD11_RS32330;end_range=15868,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32330;partial=true;pseudo=true NZ_JJLL01000032.1 Protein Homology CDS 15797 15868 . + 0 ID=cds-AD11_RS32330;Parent=gene-AD11_RS32330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15868,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414790.1;locus_tag=AD11_RS32330;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 15893 17506 . - . ID=gene-AD11_RS00930;Name=AD11_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00930;old_locus_tag=AD11_5056 NZ_JJLL01000032.1 Protein Homology CDS 15893 17506 . - 0 ID=cds-WP_000080200.1-3;Parent=gene-AD11_RS00930;Dbxref=GenBank:WP_000080200.1;Name=WP_000080200.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AD11_RS00930;product=IS66-like element ISEc23 family transposase;protein_id=WP_000080200.1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 17537 17887 . - . ID=gene-AD11_RS00935;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS00935;old_locus_tag=AD11_5057 NZ_JJLL01000032.1 Protein Homology CDS 17537 17887 . - 0 ID=cds-WP_000624722.1-3;Parent=gene-AD11_RS00935;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD11_RS00935;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLL01000032.1 RefSeq gene 17884 18309 . - . ID=gene-AD11_RS00940;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS00940;old_locus_tag=AD11_5058 NZ_JJLL01000032.1 Protein Homology CDS 17884 18309 . - 0 ID=cds-WP_000422741.1-3;Parent=gene-AD11_RS00940;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD11_RS00940;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 ##sequence-region NZ_JJLL01000033.1 1 6079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000033.1 RefSeq region 1 6079 . + . ID=NZ_JJLL01000033.1:1..6079;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000033.1 RefSeq pseudogene 16 299 . - . ID=gene-AD11_RS00945;Name=AD11_RS00945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00945;old_locus_tag=AD11_5059;partial=true;pseudo=true;start_range=.,16 NZ_JJLL01000033.1 Protein Homology CDS 16 299 . - 0 ID=cds-AD11_RS00945;Parent=gene-AD11_RS00945;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS00945;partial=true;product=transposase;pseudo=true;start_range=.,16;transl_table=11 NZ_JJLL01000033.1 RefSeq pseudogene 435 1352 . + . ID=gene-AD11_RS27365;Name=AD11_RS27365;end_range=1352,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27365;old_locus_tag=AD11_5060;partial=true;pseudo=true NZ_JJLL01000033.1 Protein Homology CDS 435 1352 . + 0 ID=cds-AD11_RS27365;Parent=gene-AD11_RS27365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=1352,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752523.1;locus_tag=AD11_RS27365;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_JJLL01000033.1 RefSeq pseudogene 1355 2374 . + . ID=gene-AD11_RS00950;Name=AD11_RS00950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00950;old_locus_tag=AD11_5061;partial=true;pseudo=true;start_range=.,1355 NZ_JJLL01000033.1 Protein Homology CDS 1355 2374 . + 0 ID=cds-AD11_RS00950;Parent=gene-AD11_RS00950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000716055.1;locus_tag=AD11_RS00950;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1355;transl_table=11 NZ_JJLL01000033.1 RefSeq gene 2374 2802 . + . ID=gene-AD11_RS00955;Name=AD11_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00955;old_locus_tag=AD11_5062 NZ_JJLL01000033.1 Protein Homology CDS 2374 2802 . + 0 ID=cds-WP_001774872.1;Parent=gene-AD11_RS00955;Dbxref=GenBank:WP_001774872.1;Name=WP_001774872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078875.1;locus_tag=AD11_RS00955;product=hypothetical protein;protein_id=WP_001774872.1;transl_table=11 NZ_JJLL01000033.1 RefSeq gene 3013 3174 . - . ID=gene-AD11_RS00960;Name=AD11_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00960;old_locus_tag=AD11_5063 NZ_JJLL01000033.1 Protein Homology CDS 3013 3174 . - 0 ID=cds-WP_033865353.1;Parent=gene-AD11_RS00960;Dbxref=GenBank:WP_033865353.1;Name=WP_033865353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347001.1;locus_tag=AD11_RS00960;product=hypothetical protein;protein_id=WP_033865353.1;transl_table=11 NZ_JJLL01000033.1 RefSeq pseudogene 3209 4125 . - . ID=gene-AD11_RS00965;Name=AD11_RS00965;end_range=4125,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS00965;old_locus_tag=AD11_5064;partial=true;pseudo=true NZ_JJLL01000033.1 Protein Homology CDS 3209 4125 . - 0 ID=cds-AD11_RS00965;Parent=gene-AD11_RS00965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=4125,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AD11_RS00965;partial=true;product=IS3-like element ISSen4 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000033.1 RefSeq gene 4212 5234 . + . ID=gene-AD11_RS00970;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AD11_RS00970;old_locus_tag=AD11_5065 NZ_JJLL01000033.1 Protein Homology CDS 4212 5234 . + 0 ID=cds-WP_033866183.1;Parent=gene-AD11_RS00970;Dbxref=GenBank:WP_033866183.1;Name=WP_033866183.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AD11_RS00970;product=IS21-like element IS100 family transposase;protein_id=WP_033866183.1;transl_table=11 NZ_JJLL01000033.1 RefSeq gene 5231 6013 . + . ID=gene-AD11_RS00975;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AD11_RS00975;old_locus_tag=AD11_5066 NZ_JJLL01000033.1 Protein Homology CDS 5231 6013 . + 0 ID=cds-WP_001300609.1-2;Parent=gene-AD11_RS00975;Dbxref=GenBank:WP_001300609.1;Name=WP_001300609.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AD11_RS00975;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001300609.1;transl_table=11 ##sequence-region NZ_JJLL01000034.1 1 7310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000034.1 RefSeq region 1 7310 . + . ID=NZ_JJLL01000034.1:1..7310;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000034.1 RefSeq gene 1 250 . - . ID=gene-AD11_RS00980;Name=AD11_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00980;old_locus_tag=AD11_5067;partial=true;start_range=.,1 NZ_JJLL01000034.1 Protein Homology CDS 1 250 . - 0 ID=cds-WP_000567707.1;Parent=gene-AD11_RS00980;Dbxref=GenBank:WP_000567707.1;Name=WP_000567707.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AD11_RS00980;partial=true;product=transposase;protein_id=WP_000567707.1;start_range=.,1;transl_table=11 NZ_JJLL01000034.1 RefSeq pseudogene 347 460 . + . ID=gene-AD11_RS32335;Name=AD11_RS32335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32335;partial=true;pseudo=true;start_range=.,347 NZ_JJLL01000034.1 Protein Homology CDS 347 460 . + 0 ID=cds-AD11_RS32335;Parent=gene-AD11_RS32335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309331.1;locus_tag=AD11_RS32335;partial=true;product=hypothetical protein;pseudo=true;start_range=.,347;transl_table=11 NZ_JJLL01000034.1 RefSeq pseudogene 603 813 . + . ID=gene-AD11_RS27905;Name=AD11_RS27905;end_range=813,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27905;partial=true;pseudo=true NZ_JJLL01000034.1 Protein Homology CDS 603 813 . + 0 ID=cds-AD11_RS27905;Parent=gene-AD11_RS27905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=813,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309332.1;locus_tag=AD11_RS27905;partial=true;product=TOTE conflict system archaeo-eukaryotic primase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000034.1 RefSeq gene 959 1387 . - . ID=gene-AD11_RS00985;Name=AD11_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00985;old_locus_tag=AD11_5068 NZ_JJLL01000034.1 Protein Homology CDS 959 1387 . - 0 ID=cds-WP_001296373.1;Parent=gene-AD11_RS00985;Dbxref=GenBank:WP_001296373.1;Name=WP_001296373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296373.1;locus_tag=AD11_RS00985;product=DUF417 family protein;protein_id=WP_001296373.1;transl_table=11 NZ_JJLL01000034.1 RefSeq gene 1427 1987 . - . ID=gene-AD11_RS00990;Name=AD11_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00990 NZ_JJLL01000034.1 Protein Homology CDS 1427 1987 . - 0 ID=cds-WP_000109148.1;Parent=gene-AD11_RS00990;Dbxref=GenBank:WP_000109148.1;Name=WP_000109148.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000109148.1;locus_tag=AD11_RS00990;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000109148.1;transl_table=11 NZ_JJLL01000034.1 RefSeq gene 2029 2289 . - . ID=gene-AD11_RS00995;Name=AD11_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS00995;old_locus_tag=AD11_5070 NZ_JJLL01000034.1 Protein Homology CDS 2029 2289 . - 0 ID=cds-WP_001110186.1;Parent=gene-AD11_RS00995;Dbxref=GenBank:WP_001110186.1;Name=WP_001110186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001110186.1;locus_tag=AD11_RS00995;product=DUF1471 domain-containing protein;protein_id=WP_001110186.1;transl_table=11 NZ_JJLL01000034.1 RefSeq pseudogene 2838 3587 . + . ID=gene-AD11_RS01000;Name=AD11_RS01000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01000;old_locus_tag=AD11_5071;partial=true;pseudo=true;start_range=.,2838 NZ_JJLL01000034.1 Protein Homology CDS 2838 3587 . + 0 ID=cds-AD11_RS01000;Parent=gene-AD11_RS01000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=AD11_RS01000;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,2838;transl_table=11 NZ_JJLL01000034.1 RefSeq pseudogene 4114 4236 . + . ID=gene-AD11_RS31195;Name=AD11_RS31195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31195;partial=true;pseudo=true;start_range=.,4114 NZ_JJLL01000034.1 Protein Homology CDS 4114 4236 . + 0 ID=cds-AD11_RS31195;Parent=gene-AD11_RS31195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015218.6;locus_tag=AD11_RS31195;partial=true;product=hypothetical protein;pseudo=true;start_range=.,4114;transl_table=11 NZ_JJLL01000034.1 RefSeq pseudogene 4327 5067 . + . ID=gene-AD11_RS32340;Name=AD11_RS32340;end_range=5067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32340;partial=true;pseudo=true NZ_JJLL01000034.1 Protein Homology CDS 4327 5067 . + 0 ID=cds-AD11_RS32340;Parent=gene-AD11_RS32340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=5067,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS32340;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000034.1 cmsearch sequence_feature 4608 4724 . + . ID=id-AD11_RS32340;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS32340;pseudo=true NZ_JJLL01000034.1 RefSeq gene 5740 7248 . + . ID=gene-AD11_RS01025;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AD11_RS01025;old_locus_tag=AD11_5076 NZ_JJLL01000034.1 Protein Homology CDS 5740 7248 . + 0 ID=cds-WP_001189111.1-2;Parent=gene-AD11_RS01025;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AD11_RS01025;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 ##sequence-region NZ_JJLL01000035.1 1 866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000035.1 RefSeq region 1 866 . + . ID=NZ_JJLL01000035.1:1..866;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000035.1 RefSeq gene 1 832 . + . ID=gene-AD11_RS01035;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AD11_RS01035;old_locus_tag=AD11_5077;partial=true;start_range=.,1 NZ_JJLL01000035.1 Protein Homology CDS 1 832 . + 1 ID=cds-WP_033866184.1;Parent=gene-AD11_RS01035;Dbxref=GenBank:WP_033866184.1;Name=WP_033866184.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS01035;partial=true;product=IS66 family transposase;protein_id=WP_033866184.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000036.1 1 2305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000036.1 RefSeq region 1 2305 . + . ID=NZ_JJLL01000036.1:1..2305;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000036.1 RefSeq gene 11 1173 . + . ID=gene-AD11_RS01045;Name=AD11_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01045;old_locus_tag=AD11_5079 NZ_JJLL01000036.1 Protein Homology CDS 11 272 . + 0 ID=cds-WP_103852365.1-2;Parent=gene-AD11_RS01045;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS01045;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000036.1 Protein Homology CDS 272 1173 . + 2 ID=cds-WP_103852365.1-2;Parent=gene-AD11_RS01045;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS01045;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000036.1 RefSeq gene 1267 1644 . + . ID=gene-AD11_RS01050;Name=AD11_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01050;old_locus_tag=AD11_5080 NZ_JJLL01000036.1 GeneMarkS-2+ CDS 1267 1644 . + 0 ID=cds-WP_248784870.1;Parent=gene-AD11_RS01050;Dbxref=GenBank:WP_248784870.1;Name=WP_248784870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS01050;product=hypothetical protein;protein_id=WP_248784870.1;transl_table=11 NZ_JJLL01000036.1 RefSeq pseudogene 1800 2305 . - . ID=gene-AD11_RS01055;Name=AD11_RS01055;end_range=2305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01055;old_locus_tag=AD11_5081;partial=true;pseudo=true NZ_JJLL01000036.1 Protein Homology CDS 1800 2305 . - 2 ID=cds-AD11_RS01055;Parent=gene-AD11_RS01055;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2305,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AD11_RS01055;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000037.1 1 2513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000037.1 RefSeq region 1 2513 . + . ID=NZ_JJLL01000037.1:1..2513;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000037.1 RefSeq gene 1 796 . + . ID=gene-AD11_RS01060;Name=AD11_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01060;old_locus_tag=AD11_5082;partial=true;start_range=.,1 NZ_JJLL01000037.1 Protein Homology CDS 1 796 . + 1 ID=cds-WP_072190393.1;Parent=gene-AD11_RS01060;Dbxref=GenBank:WP_072190393.1;Name=WP_072190393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AD11_RS01060;partial=true;product=DUF4329 domain-containing protein;protein_id=WP_072190393.1;start_range=.,1;transl_table=11 NZ_JJLL01000037.1 RefSeq gene 768 1151 . + . ID=gene-AD11_RS01065;Name=yhhH;gbkey=Gene;gene=yhhH;gene_biotype=protein_coding;locus_tag=AD11_RS01065 NZ_JJLL01000037.1 Protein Homology CDS 768 1151 . + 0 ID=cds-WP_033865120.1;Parent=gene-AD11_RS01065;Dbxref=GenBank:WP_033865120.1;Name=WP_033865120.1;Note=This BlastRule distinguishes YhhH from its paralog YbbC. Both are named for founding members from Escherichia coli K-12%2C and belong Pfam family PF15631.;gbkey=CDS;gene=yhhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417940.2;locus_tag=AD11_RS01065;product=protein YhhH;protein_id=WP_033865120.1;transl_table=11 NZ_JJLL01000037.1 RefSeq pseudogene 1256 1606 . + . ID=gene-AD11_RS01070;Name=AD11_RS01070;end_range=1606,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01070;partial=true;pseudo=true NZ_JJLL01000037.1 Protein Homology CDS 1256 1606 . + 0 ID=cds-AD11_RS01070;Parent=gene-AD11_RS01070;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1606,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AD11_RS01070;partial=true;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000037.1 RefSeq gene 1747 2513 . + . ID=gene-AD11_RS01075;Name=AD11_RS01075;end_range=2513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01075;old_locus_tag=AD11_5083;partial=true NZ_JJLL01000037.1 Protein Homology CDS 1747 2513 . + 0 ID=cds-WP_033866185.1;Parent=gene-AD11_RS01075;Dbxref=GenBank:WP_033866185.1;Name=WP_033866185.1;Ontology_term=GO:0006313,GO:0004803;end_range=2513,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS01075;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_033866185.1;transl_table=11 ##sequence-region NZ_JJLL01000038.1 1 36467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000038.1 RefSeq region 1 36467 . + . ID=NZ_JJLL01000038.1:1..36467;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000038.1 RefSeq gene 173 556 . + . ID=gene-AD11_RS01080;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AD11_RS01080;old_locus_tag=AD11_5084 NZ_JJLL01000038.1 Protein Homology CDS 173 556 . + 0 ID=cds-WP_001151564.1;Parent=gene-AD11_RS01080;Dbxref=GenBank:WP_001151564.1;Name=WP_001151564.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151562.1;locus_tag=AD11_RS01080;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001151564.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 750 1436 . + . ID=gene-AD11_RS01085;Name=AD11_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01085;old_locus_tag=AD11_5085 NZ_JJLL01000038.1 Protein Homology CDS 750 1436 . + 0 ID=cds-WP_000332487.1;Parent=gene-AD11_RS01085;Dbxref=GenBank:WP_000332487.1;Name=WP_000332487.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589401.1;locus_tag=AD11_RS01085;product=PAS domain-containing protein;protein_id=WP_000332487.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 1530 1757 . + . ID=gene-AD11_RS01090;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AD11_RS01090;old_locus_tag=AD11_5086 NZ_JJLL01000038.1 Protein Homology CDS 1530 1757 . + 0 ID=cds-WP_001254388.1;Parent=gene-AD11_RS01090;Dbxref=GenBank:WP_001254388.1;Name=WP_001254388.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254388.1;locus_tag=AD11_RS01090;product=conjugal transfer relaxosome protein TraY;protein_id=WP_001254388.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 1791 2153 . + . ID=gene-AD11_RS01095;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AD11_RS01095;old_locus_tag=AD11_5087 NZ_JJLL01000038.1 Protein Homology CDS 1791 2153 . + 0 ID=cds-WP_001098998.1;Parent=gene-AD11_RS01095;Dbxref=GenBank:WP_001098998.1;Name=WP_001098998.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668211.1;locus_tag=AD11_RS01095;product=type IV conjugative transfer system pilin TraA;protein_id=WP_001098998.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 2158 2469 . + . ID=gene-AD11_RS01100;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AD11_RS01100;old_locus_tag=AD11_5088 NZ_JJLL01000038.1 Protein Homology CDS 2158 2469 . + 0 ID=cds-WP_000012106.1;Parent=gene-AD11_RS01100;Dbxref=GenBank:WP_000012106.1;Name=WP_000012106.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AD11_RS01100;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012106.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 2491 3057 . + . ID=gene-AD11_RS01105;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AD11_RS01105;old_locus_tag=AD11_5089 NZ_JJLL01000038.1 Protein Homology CDS 2491 3057 . + 0 ID=cds-WP_000399804.1;Parent=gene-AD11_RS01105;Dbxref=GenBank:WP_000399804.1;Name=WP_000399804.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AD11_RS01105;product=type IV conjugative transfer system protein TraE;protein_id=WP_000399804.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 3044 3772 . + . ID=gene-AD11_RS01110;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AD11_RS01110;old_locus_tag=AD11_5090 NZ_JJLL01000038.1 Protein Homology CDS 3044 3772 . + 0 ID=cds-WP_001230787.1;Parent=gene-AD11_RS01110;Dbxref=GenBank:WP_001230787.1;Name=WP_001230787.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=AD11_RS01110;product=type-F conjugative transfer system secretin TraK;protein_id=WP_001230787.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 3772 5199 . + . ID=gene-AD11_RS01115;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AD11_RS01115;old_locus_tag=AD11_5091 NZ_JJLL01000038.1 Protein Homology CDS 3772 5199 . + 0 ID=cds-WP_000146638.1;Parent=gene-AD11_RS01115;Dbxref=GenBank:WP_000146638.1;Name=WP_000146638.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AD11_RS01115;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_000146638.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 5189 5773 . + . ID=gene-AD11_RS01120;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AD11_RS01120;old_locus_tag=AD11_5092 NZ_JJLL01000038.1 Protein Homology CDS 5189 5773 . + 0 ID=cds-WP_000002795.1;Parent=gene-AD11_RS01120;Dbxref=GenBank:WP_000002795.1;Name=WP_000002795.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=AD11_RS01120;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_000002795.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 5760 6080 . + . ID=gene-AD11_RS01125;Name=AD11_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01125;old_locus_tag=AD11_5093 NZ_JJLL01000038.1 Protein Homology CDS 5760 6080 . + 0 ID=cds-WP_001057302.1;Parent=gene-AD11_RS01125;Dbxref=GenBank:WP_001057302.1;Name=WP_001057302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377845.1;locus_tag=AD11_RS01125;product=conjugal transfer protein TrbD;protein_id=WP_001057302.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 6073 6324 . + . ID=gene-AD11_RS01130;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=AD11_RS01130;old_locus_tag=AD11_5094 NZ_JJLL01000038.1 Protein Homology CDS 6073 6324 . + 0 ID=cds-WP_001038341.1;Parent=gene-AD11_RS01130;Dbxref=GenBank:WP_001038341.1;Name=WP_001038341.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AD11_RS01130;product=conjugal transfer protein TrbG;protein_id=WP_001038341.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 6321 6836 . + . ID=gene-AD11_RS01135;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AD11_RS01135;old_locus_tag=AD11_5095 NZ_JJLL01000038.1 Protein Homology CDS 6321 6836 . + 0 ID=cds-WP_000809893.1;Parent=gene-AD11_RS01135;Dbxref=GenBank:WP_000809893.1;Name=WP_000809893.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AD11_RS01135;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000809893.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 6971 7192 . + . ID=gene-AD11_RS27940;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AD11_RS27940;old_locus_tag=AD11_5096 NZ_JJLL01000038.1 Protein Homology CDS 6971 7192 . + 0 ID=cds-WP_001278978.1;Parent=gene-AD11_RS27940;Dbxref=GenBank:WP_001278978.1;Name=WP_001278978.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AD11_RS27940;product=conjugal transfer protein TraR;protein_id=WP_001278978.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 7352 9979 . + . ID=gene-AD11_RS01145;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AD11_RS01145;old_locus_tag=AD11_5098 NZ_JJLL01000038.1 Protein Homology CDS 7352 9979 . + 0 ID=cds-WP_001064239.1;Parent=gene-AD11_RS01145;Dbxref=GenBank:WP_001064239.1;Name=WP_001064239.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AD11_RS01145;product=type IV secretion system protein TraC;protein_id=WP_001064239.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 9976 10362 . + . ID=gene-AD11_RS01150;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AD11_RS01150;old_locus_tag=AD11_5099 NZ_JJLL01000038.1 Protein Homology CDS 9976 10362 . + 0 ID=cds-WP_000214082.1;Parent=gene-AD11_RS01150;Dbxref=GenBank:WP_000214082.1;Name=WP_000214082.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AD11_RS01150;product=type-F conjugative transfer system protein TrbI;protein_id=WP_000214082.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 10359 10991 . + . ID=gene-AD11_RS01155;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AD11_RS01155;old_locus_tag=AD11_5100 NZ_JJLL01000038.1 Protein Homology CDS 10359 10991 . + 0 ID=cds-WP_001203720.1;Parent=gene-AD11_RS01155;Dbxref=GenBank:WP_001203720.1;Name=WP_001203720.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=AD11_RS01155;product=type-F conjugative transfer system protein TraW;protein_id=WP_001203720.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 10988 11980 . + . ID=gene-AD11_RS01160;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AD11_RS01160;old_locus_tag=AD11_5101 NZ_JJLL01000038.1 Protein Homology CDS 10988 11980 . + 0 ID=cds-WP_000830838.1;Parent=gene-AD11_RS01160;Dbxref=GenBank:WP_000830838.1;Name=WP_000830838.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AD11_RS01160;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830838.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 12010 12315 . + . ID=gene-AD11_RS01165;Name=AD11_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01165 NZ_JJLL01000038.1 Protein Homology CDS 12010 12315 . + 0 ID=cds-WP_000224411.1;Parent=gene-AD11_RS01165;Dbxref=GenBank:WP_000224411.1;Name=WP_000224411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505125.1;locus_tag=AD11_RS01165;product=hypothetical protein;protein_id=WP_000224411.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 12324 12962 . + . ID=gene-AD11_RS01170;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AD11_RS01170;old_locus_tag=AD11_5102 NZ_JJLL01000038.1 Protein Homology CDS 12324 12962 . + 0 ID=cds-WP_001080257.1;Parent=gene-AD11_RS01170;Dbxref=GenBank:WP_001080257.1;Name=WP_001080257.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733892.1;locus_tag=AD11_RS01170;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_001080257.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 12959 14767 . + . ID=gene-AD11_RS01175;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AD11_RS01175;old_locus_tag=AD11_5103 NZ_JJLL01000038.1 Protein Homology CDS 12959 14767 . + 0 ID=cds-WP_024221016.1;Parent=gene-AD11_RS01175;Dbxref=GenBank:WP_024221016.1;Name=WP_024221016.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=AD11_RS01175;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_024221016.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 14794 15051 . + . ID=gene-AD11_RS01180;Name=AD11_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01180;old_locus_tag=AD11_5104 NZ_JJLL01000038.1 Protein Homology CDS 14794 15051 . + 0 ID=cds-WP_000864320.1;Parent=gene-AD11_RS01180;Dbxref=GenBank:WP_000864320.1;Name=WP_000864320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=AD11_RS01180;product=conjugal transfer protein TrbE;protein_id=WP_000864320.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 15044 15787 . + . ID=gene-AD11_RS01185;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AD11_RS01185;old_locus_tag=AD11_5105 NZ_JJLL01000038.1 Protein Homology CDS 15044 15787 . + 0 ID=cds-WP_001749618.1;Parent=gene-AD11_RS01185;Dbxref=GenBank:WP_001749618.1;Name=WP_001749618.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AD11_RS01185;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001749618.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 15803 16141 . + . ID=gene-AD11_RS01190;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AD11_RS01190;old_locus_tag=AD11_5106 NZ_JJLL01000038.1 Protein Homology CDS 15803 16141 . + 0 ID=cds-WP_001287905.1;Parent=gene-AD11_RS01190;Dbxref=GenBank:WP_001287905.1;Name=WP_001287905.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553756.1;locus_tag=AD11_RS01190;product=conjugal transfer protein TrbA;protein_id=WP_001287905.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 16268 16552 . + . ID=gene-AD11_RS01195;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AD11_RS01195;old_locus_tag=AD11_5107 NZ_JJLL01000038.1 Protein Homology CDS 16268 16552 . + 0 ID=cds-WP_001448202.1;Parent=gene-AD11_RS01195;Dbxref=GenBank:WP_001448202.1;Name=WP_001448202.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=AD11_RS01195;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_001448202.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 16539 17084 . + . ID=gene-AD11_RS01200;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AD11_RS01200;old_locus_tag=AD11_5108 NZ_JJLL01000038.1 Protein Homology CDS 16539 17084 . + 0 ID=cds-WP_000059824.1;Parent=gene-AD11_RS01200;Dbxref=GenBank:WP_000059824.1;Name=WP_000059824.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AD11_RS01200;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_000059824.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 17014 17355 . + . ID=gene-AD11_RS27945;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AD11_RS27945;old_locus_tag=AD11_5109 NZ_JJLL01000038.1 Protein Homology CDS 17014 17355 . + 0 ID=cds-WP_001448115.1;Parent=gene-AD11_RS27945;Dbxref=GenBank:WP_001448115.1;Name=WP_001448115.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001444236.1;locus_tag=AD11_RS27945;product=P-type conjugative transfer protein TrbJ;protein_id=WP_001448115.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 17336 17728 . + . ID=gene-AD11_RS01205;Name=trbF;gbkey=Gene;gene=trbF;gene_biotype=protein_coding;locus_tag=AD11_RS01205;old_locus_tag=AD11_5110 NZ_JJLL01000038.1 Protein Homology CDS 17336 17728 . + 0 ID=cds-WP_000660703.1;Parent=gene-AD11_RS01205;Dbxref=GenBank:WP_000660703.1;Name=WP_000660703.1;gbkey=CDS;gene=trbF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230912.1;locus_tag=AD11_RS01205;product=F-type conjugal transfer protein TrbF;protein_id=WP_000660703.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 17715 19088 . + . ID=gene-AD11_RS01210;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AD11_RS01210;old_locus_tag=AD11_5111 NZ_JJLL01000038.1 Protein Homology CDS 17715 19088 . + 0 ID=cds-WP_001137364.1;Parent=gene-AD11_RS01210;Dbxref=GenBank:WP_001137364.1;Name=WP_001137364.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137361.1;locus_tag=AD11_RS01210;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_001137364.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 19085 21904 . + . ID=gene-AD11_RS01215;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AD11_RS01215;old_locus_tag=AD11_5112 NZ_JJLL01000038.1 Protein Homology CDS 19085 21904 . + 0 ID=cds-WP_001007057.1;Parent=gene-AD11_RS01215;Dbxref=GenBank:WP_001007057.1;Name=WP_001007057.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007068.1;locus_tag=AD11_RS01215;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_001007057.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 21923 22420 . + . ID=gene-AD11_RS01220;Name=AD11_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01220 NZ_JJLL01000038.1 Protein Homology CDS 21923 22420 . + 0 ID=cds-WP_000605861.1;Parent=gene-AD11_RS01220;Dbxref=GenBank:WP_000605861.1;Name=WP_000605861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605858.1;locus_tag=AD11_RS01220;product=hypothetical protein;protein_id=WP_000605861.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 22452 23183 . + . ID=gene-AD11_RS01225;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AD11_RS01225;old_locus_tag=AD11_5113 NZ_JJLL01000038.1 Protein Homology CDS 22452 23183 . + 0 ID=cds-WP_024221017.1;Parent=gene-AD11_RS01225;Dbxref=GenBank:WP_024221017.1;Name=WP_024221017.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=AD11_RS01225;product=conjugal transfer complement resistance protein TraT;protein_id=WP_024221017.1;transl_table=11 NZ_JJLL01000038.1 RefSeq pseudogene 23436 25644 . + . ID=gene-AD11_RS01230;Name=traD;gbkey=Gene;gene=traD;gene_biotype=pseudogene;locus_tag=AD11_RS01230;old_locus_tag=AD11_5115;pseudo=true NZ_JJLL01000038.1 Protein Homology CDS 23436 25644 . + 0 ID=cds-AD11_RS01230;Parent=gene-AD11_RS01230;Note=frameshifted;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001577029.1;locus_tag=AD11_RS01230;product=type IV conjugative transfer system coupling protein TraD;pseudo=true;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 25644 30914 . + . ID=gene-AD11_RS01235;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AD11_RS01235;old_locus_tag=AD11_5116 NZ_JJLL01000038.1 Protein Homology CDS 25644 30914 . + 0 ID=cds-WP_033866186.1;Parent=gene-AD11_RS01235;Dbxref=GenBank:WP_033866186.1;Name=WP_033866186.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=AD11_RS01235;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_033866186.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 30934 31680 . + . ID=gene-AD11_RS01240;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AD11_RS01240;old_locus_tag=AD11_5117 NZ_JJLL01000038.1 Protein Homology CDS 30934 31680 . + 0 ID=cds-WP_000205725.1;Parent=gene-AD11_RS01240;Dbxref=GenBank:WP_000205725.1;Name=WP_000205725.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858383.2;locus_tag=AD11_RS01240;product=conjugal transfer pilus acetylase TraX;protein_id=WP_000205725.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 31739 32599 . + . ID=gene-AD11_RS01245;Name=uilS;gbkey=Gene;gene=uilS;gene_biotype=protein_coding;locus_tag=AD11_RS01245;old_locus_tag=AD11_5118 NZ_JJLL01000038.1 Protein Homology CDS 31739 32599 . + 0 ID=cds-WP_000704523.1;Parent=gene-AD11_RS01245;Dbxref=GenBank:WP_000704523.1;Name=WP_000704523.1;gbkey=CDS;gene=uilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052670.1;locus_tag=AD11_RS01245;product=UilS family quorum-quenching N-acyl-homoserine lactonase;protein_id=WP_000704523.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 32702 33262 . + . ID=gene-AD11_RS01250;Name=AD11_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01250;old_locus_tag=AD11_5119 NZ_JJLL01000038.1 Protein Homology CDS 32702 33262 . + 0 ID=cds-WP_000139321.1;Parent=gene-AD11_RS01250;Dbxref=GenBank:WP_000139321.1;Name=WP_000139321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AD11_RS01250;product=fertility inhibition protein FinO;protein_id=WP_000139321.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 33391 33603 . + . ID=gene-AD11_RS01255;Name=AD11_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01255;old_locus_tag=AD11_5120 NZ_JJLL01000038.1 Protein Homology CDS 33391 33603 . + 0 ID=cds-WP_001309245.1;Parent=gene-AD11_RS01255;Dbxref=GenBank:WP_001309245.1;Name=WP_001309245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001369432.1;locus_tag=AD11_RS01255;product=ANR family transcriptional regulator;protein_id=WP_001309245.1;transl_table=11 NZ_JJLL01000038.1 RefSeq pseudogene 33848 33994 . + . ID=gene-AD11_RS01260;Name=AD11_RS01260;end_range=33994,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01260;partial=true;pseudo=true NZ_JJLL01000038.1 Protein Homology CDS 33848 33994 . + 0 ID=cds-AD11_RS01260;Parent=gene-AD11_RS01260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AD11_RS01260;partial=true;product=thermonuclease family protein;pseudo=true;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 34081 34506 . + . ID=gene-AD11_RS01265;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS01265;old_locus_tag=AD11_5121 NZ_JJLL01000038.1 Protein Homology CDS 34081 34506 . + 0 ID=cds-WP_000422741.1-4;Parent=gene-AD11_RS01265;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD11_RS01265;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 34503 34853 . + . ID=gene-AD11_RS01270;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS01270;old_locus_tag=AD11_5122 NZ_JJLL01000038.1 Protein Homology CDS 34503 34853 . + 0 ID=cds-WP_000624722.1-4;Parent=gene-AD11_RS01270;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD11_RS01270;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLL01000038.1 RefSeq gene 34884 36467 . + . ID=gene-AD11_RS01275;Name=AD11_RS01275;end_range=36467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01275;old_locus_tag=AD11_5123;partial=true NZ_JJLL01000038.1 Protein Homology CDS 34884 36467 . + 0 ID=cds-WP_033866187.1;Parent=gene-AD11_RS01275;Dbxref=GenBank:WP_033866187.1;Name=WP_033866187.1;Ontology_term=GO:0006313,GO:0004803;end_range=36467,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AD11_RS01275;partial=true;product=IS66-like element ISEc23 family transposase;protein_id=WP_033866187.1;transl_table=11 ##sequence-region NZ_JJLL01000039.1 1 12505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000039.1 RefSeq region 1 12505 . + . ID=NZ_JJLL01000039.1:1..12505;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000039.1 RefSeq gene 6 188 . + . ID=gene-AD11_RS01280;Name=AD11_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01280;old_locus_tag=AD11_5124 NZ_JJLL01000039.1 Protein Homology CDS 6 188 . + 0 ID=cds-WP_021566721.1;Parent=gene-AD11_RS01280;Dbxref=GenBank:WP_021566721.1;Name=WP_021566721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310767.3;locus_tag=AD11_RS01280;product=hypothetical protein;protein_id=WP_021566721.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 203 334 . + . ID=gene-AD11_RS31205;Name=AD11_RS31205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31205;old_locus_tag=AD11_5125 NZ_JJLL01000039.1 Protein Homology CDS 203 334 . + 0 ID=cds-WP_001280930.1;Parent=gene-AD11_RS31205;Dbxref=GenBank:WP_001280930.1;Name=WP_001280930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502641.1;locus_tag=AD11_RS31205;product=hypothetical protein;protein_id=WP_001280930.1;transl_table=11 NZ_JJLL01000039.1 RefSeq pseudogene 342 813 . + . ID=gene-AD11_RS01290;Name=AD11_RS01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01290;old_locus_tag=AD11_5127;pseudo=true NZ_JJLL01000039.1 Protein Homology CDS 342 813 . + 0 ID=cds-AD11_RS01290;Parent=gene-AD11_RS01290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237848.1;locus_tag=AD11_RS01290;product=lysis protein;pseudo=true;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 1115 1966 . + . ID=gene-AD11_RS01295;Name=AD11_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01295;old_locus_tag=AD11_5128 NZ_JJLL01000039.1 Protein Homology CDS 1115 1966 . + 0 ID=cds-WP_001624796.1;Parent=gene-AD11_RS01295;Dbxref=GenBank:WP_001624796.1;Name=WP_001624796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309246.1;locus_tag=AD11_RS01295;product=hypothetical protein;protein_id=WP_001624796.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 1947 3653 . + . ID=gene-AD11_RS01300;Name=AD11_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01300;old_locus_tag=AD11_5130 NZ_JJLL01000039.1 Protein Homology CDS 1947 3653 . + 0 ID=cds-WP_000143995.1;Parent=gene-AD11_RS01300;Dbxref=GenBank:WP_000143995.1;Name=WP_000143995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309247.1;locus_tag=AD11_RS01300;product=hypothetical protein;protein_id=WP_000143995.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 3653 5797 . + . ID=gene-AD11_RS01305;Name=AD11_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01305;old_locus_tag=AD11_5131 NZ_JJLL01000039.1 Protein Homology CDS 3653 5797 . + 0 ID=cds-WP_033865080.1;Parent=gene-AD11_RS01305;Dbxref=GenBank:WP_033865080.1;Name=WP_033865080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309248.1;locus_tag=AD11_RS01305;product=hypothetical protein;protein_id=WP_033865080.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 5955 6962 . + . ID=gene-AD11_RS01310;Name=AD11_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01310;old_locus_tag=AD11_5132 NZ_JJLL01000039.1 Protein Homology CDS 5955 6962 . + 0 ID=cds-WP_001624798.1;Parent=gene-AD11_RS01310;Dbxref=GenBank:WP_001624798.1;Name=WP_001624798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309249.1;locus_tag=AD11_RS01310;product=hypothetical protein;protein_id=WP_001624798.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 6985 8199 . + . ID=gene-AD11_RS01315;Name=AD11_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01315;old_locus_tag=AD11_5133 NZ_JJLL01000039.1 Protein Homology CDS 6985 8199 . + 0 ID=cds-WP_033865081.1;Parent=gene-AD11_RS01315;Dbxref=GenBank:WP_033865081.1;Name=WP_033865081.1;Ontology_term=GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309250.1;locus_tag=AD11_RS01315;product=N4-gp56 family major capsid protein;protein_id=WP_033865081.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 8254 8646 . + . ID=gene-AD11_RS01320;Name=AD11_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01320;old_locus_tag=AD11_5134 NZ_JJLL01000039.1 Protein Homology CDS 8254 8646 . + 0 ID=cds-WP_001140438.1;Parent=gene-AD11_RS01320;Dbxref=GenBank:WP_001140438.1;Name=WP_001140438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309251.1;locus_tag=AD11_RS01320;product=hypothetical protein;protein_id=WP_001140438.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 8697 9158 . + . ID=gene-AD11_RS01325;Name=AD11_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01325;old_locus_tag=AD11_5135 NZ_JJLL01000039.1 Protein Homology CDS 8697 9158 . + 0 ID=cds-WP_016232486.1;Parent=gene-AD11_RS01325;Dbxref=GenBank:WP_016232486.1;Name=WP_016232486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309252.1;locus_tag=AD11_RS01325;product=hypothetical protein;protein_id=WP_016232486.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 9142 9705 . + . ID=gene-AD11_RS01330;Name=AD11_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01330;old_locus_tag=AD11_5136 NZ_JJLL01000039.1 Protein Homology CDS 9142 9705 . + 0 ID=cds-WP_016232075.1;Parent=gene-AD11_RS01330;Dbxref=GenBank:WP_016232075.1;Name=WP_016232075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309253.1;locus_tag=AD11_RS01330;product=hypothetical protein;protein_id=WP_016232075.1;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 9705 10355 . + . ID=gene-AD11_RS01335;Name=AD11_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01335;old_locus_tag=AD11_5137 NZ_JJLL01000039.1 Protein Homology CDS 9705 10355 . + 0 ID=cds-WP_000207910.1;Parent=gene-AD11_RS01335;Dbxref=GenBank:WP_000207910.1;Name=WP_000207910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309254.1;locus_tag=AD11_RS01335;product=DUF6682 family protein;protein_id=WP_000207910.1;transl_table=11 NZ_JJLL01000039.1 RefSeq pseudogene 10352 11678 . + . ID=gene-AD11_RS01340;Name=AD11_RS01340;end_range=11678,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01340;old_locus_tag=AD11_5138;partial=true;pseudo=true NZ_JJLL01000039.1 Protein Homology CDS 10352 11678 . + 0 ID=cds-AD11_RS01340;Parent=gene-AD11_RS01340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019062,GO:0046718;end_range=11678,.;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117999.1;locus_tag=AD11_RS01340;partial=true;product=tail fiber protein;pseudo=true;transl_table=11 NZ_JJLL01000039.1 RefSeq gene 11886 12353 . + . ID=gene-AD11_RS33105;Name=AD11_RS33105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33105;old_locus_tag=AD11_5139 NZ_JJLL01000039.1 GeneMarkS-2+ CDS 11886 12353 . + 0 ID=cds-WP_024235089.1;Parent=gene-AD11_RS33105;Dbxref=GenBank:WP_024235089.1;Name=WP_024235089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS33105;product=collagen-like protein;protein_id=WP_024235089.1;transl_table=11 ##sequence-region NZ_JJLL01000040.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000040.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000040.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000040.1 RefSeq gene 1 170 . - . ID=gene-AD11_RS01345;Name=AD11_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01345;old_locus_tag=AD11_5141;partial=true;start_range=.,1 NZ_JJLL01000040.1 Protein Homology CDS 1 170 . - 0 ID=cds-WP_033866188.1;Parent=gene-AD11_RS01345;Dbxref=GenBank:WP_033866188.1;Name=WP_033866188.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AD11_RS01345;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_033866188.1;start_range=.,1;transl_table=11 NZ_JJLL01000040.1 RefSeq gene 271 1659 . + . ID=gene-AD11_RS01350;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AD11_RS01350;old_locus_tag=AD11_5142 NZ_JJLL01000040.1 Protein Homology CDS 271 1659 . + 0 ID=cds-WP_000156615.1;Parent=gene-AD11_RS01350;Dbxref=GenBank:WP_000156615.1;Name=WP_000156615.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AD11_RS01350;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000156615.1;transl_table=11 NZ_JJLL01000040.1 RefSeq gene 1723 2047 . + . ID=gene-AD11_RS01355;Name=AD11_RS01355;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01355;old_locus_tag=AD11_5143;partial=true NZ_JJLL01000040.1 Protein Homology CDS 1723 2047 . + 0 ID=cds-WP_033866189.1;Parent=gene-AD11_RS01355;Dbxref=GenBank:WP_033866189.1;Name=WP_033866189.1;Ontology_term=GO:0006541,GO:0004359;end_range=2047,.;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AD11_RS01355;partial=true;product=glutaminase;protein_id=WP_033866189.1;transl_table=11 ##sequence-region NZ_JJLL01000041.1 1 10980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000041.1 RefSeq region 1 10980 . + . ID=NZ_JJLL01000041.1:1..10980;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000041.1 RefSeq gene 1 315 . + . ID=gene-AD11_RS01360;Name=AD11_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01360;partial=true;start_range=.,1 NZ_JJLL01000041.1 Protein Homology CDS 1 315 . + 0 ID=cds-WP_004998444.1;Parent=gene-AD11_RS01360;Dbxref=GenBank:WP_004998444.1;Name=WP_004998444.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414790.1;locus_tag=AD11_RS01360;partial=true;product=IS30 family transposase;protein_id=WP_004998444.1;start_range=.,1;transl_table=11 NZ_JJLL01000041.1 RefSeq pseudogene 322 1218 . + . ID=gene-AD11_RS01365;Name=AD11_RS01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01365;old_locus_tag=AD11_5144;partial=true;pseudo=true;start_range=.,322 NZ_JJLL01000041.1 Protein Homology CDS 322 1218 . + 0 ID=cds-AD11_RS01365;Parent=gene-AD11_RS01365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AD11_RS01365;partial=true;product=IS3-like element IS600 family transposase;pseudo=true;start_range=.,322;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 1236 1685 . + . ID=gene-AD11_RS01370;Name=AD11_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01370 NZ_JJLL01000041.1 Protein Homology CDS 1236 1685 . + 0 ID=cds-WP_223216376.1;Parent=gene-AD11_RS01370;Dbxref=GenBank:WP_223216376.1;Name=WP_223216376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620903.1;locus_tag=AD11_RS01370;product=hypothetical protein;protein_id=WP_223216376.1;transl_table=11 NZ_JJLL01000041.1 RefSeq pseudogene 2101 3632 . + . ID=gene-AD11_RS30360;Name=AD11_RS30360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30360;pseudo=true NZ_JJLL01000041.1 Protein Homology CDS 2101 3632 . + 0 ID=cds-AD11_RS30360;Parent=gene-AD11_RS30360;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317439.1;locus_tag=AD11_RS30360;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000041.1 RefSeq pseudogene 3666 4175 . - . ID=gene-AD11_RS27965;Name=AD11_RS27965;end_range=4175,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27965;partial=true;pseudo=true;start_range=.,3666 NZ_JJLL01000041.1 Protein Homology CDS 3666 4175 . - 0 ID=cds-AD11_RS27965;Parent=gene-AD11_RS27965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015727,GO:0015129,GO:0005886;end_range=4175,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000545262.1;locus_tag=AD11_RS27965;partial=true;product=L-lactate permease;pseudo=true;start_range=.,3666;transl_table=11 NZ_JJLL01000041.1 RefSeq pseudogene 4177 4517 . + . ID=gene-AD11_RS27970;Name=AD11_RS27970;end_range=4517,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27970;partial=true;pseudo=true;start_range=.,4177 NZ_JJLL01000041.1 Protein Homology CDS 4177 4517 . + 0 ID=cds-AD11_RS27970;Parent=gene-AD11_RS27970;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4517,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555401.1;locus_tag=AD11_RS27970;partial=true;product=transposase;pseudo=true;start_range=.,4177;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 4826 5098 . - . ID=gene-AD11_RS33110;Name=AD11_RS33110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33110 NZ_JJLL01000041.1 Protein Homology CDS 4826 5098 . - 0 ID=cds-WP_001327722.1;Parent=gene-AD11_RS33110;Dbxref=GenBank:WP_001327722.1;Name=WP_001327722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309731.1;locus_tag=AD11_RS33110;product=hypothetical protein;protein_id=WP_001327722.1;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 5095 5310 . - . ID=gene-AD11_RS01395;Name=AD11_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01395;old_locus_tag=AD11_5151 NZ_JJLL01000041.1 Protein Homology CDS 5095 5310 . - 0 ID=cds-WP_000266542.1;Parent=gene-AD11_RS01395;Dbxref=GenBank:WP_000266542.1;Name=WP_000266542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001622039.1;locus_tag=AD11_RS01395;product=hypothetical protein;protein_id=WP_000266542.1;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 5314 5682 . - . ID=gene-AD11_RS01400;Name=AD11_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01400;old_locus_tag=AD11_5152 NZ_JJLL01000041.1 Protein Homology CDS 5314 5682 . - 0 ID=cds-WP_033865113.1;Parent=gene-AD11_RS01400;Dbxref=GenBank:WP_033865113.1;Name=WP_033865113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001456887.1;locus_tag=AD11_RS01400;product=hypothetical protein;protein_id=WP_033865113.1;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 5694 5885 . - . ID=gene-AD11_RS01405;Name=AD11_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01405 NZ_JJLL01000041.1 Protein Homology CDS 5694 5885 . - 0 ID=cds-WP_001322947.1;Parent=gene-AD11_RS01405;Dbxref=GenBank:WP_001322947.1;Name=WP_001322947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322947.1;locus_tag=AD11_RS01405;product=hypothetical protein;protein_id=WP_001322947.1;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 5973 6215 . - . ID=gene-AD11_RS01410;Name=AD11_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01410;old_locus_tag=AD11_5153 NZ_JJLL01000041.1 Protein Homology CDS 5973 6215 . - 0 ID=cds-WP_001296383.1;Parent=gene-AD11_RS01410;Dbxref=GenBank:WP_001296383.1;Name=WP_001296383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244175.1;locus_tag=AD11_RS01410;product=hypothetical protein;protein_id=WP_001296383.1;transl_table=11 NZ_JJLL01000041.1 RefSeq pseudogene 6709 6859 . + . ID=gene-AD11_RS31215;Name=AD11_RS31215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31215;partial=true;pseudo=true;start_range=.,6709 NZ_JJLL01000041.1 Protein Homology CDS 6709 6859 . + 0 ID=cds-AD11_RS31215;Parent=gene-AD11_RS31215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562684.1;locus_tag=AD11_RS31215;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,6709;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 7077 9167 . - . ID=gene-AD11_RS01420;Name=iha;gbkey=Gene;gene=iha;gene_biotype=protein_coding;locus_tag=AD11_RS01420;old_locus_tag=AD11_5155 NZ_JJLL01000041.1 Protein Homology CDS 7077 9167 . - 0 ID=cds-WP_001223343.1;Parent=gene-AD11_RS01420;Dbxref=GenBank:WP_001223343.1;Name=WP_001223343.1;gbkey=CDS;gene=iha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309387.1;locus_tag=AD11_RS01420;product=bifunctional siderophore receptor/adhesin Iha;protein_id=WP_001223343.1;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 9106 9288 . + . ID=gene-AD11_RS32985;Name=AD11_RS32985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32985;old_locus_tag=AD11_5156 NZ_JJLL01000041.1 Protein Homology CDS 9106 9288 . + 0 ID=cds-WP_001702211.1;Parent=gene-AD11_RS32985;Dbxref=GenBank:WP_001702211.1;Name=WP_001702211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922600.1;locus_tag=AD11_RS32985;product=hypothetical protein;protein_id=WP_001702211.1;transl_table=11 NZ_JJLL01000041.1 RefSeq gene 9667 10895 . - . ID=gene-AD11_RS27990;Name=AD11_RS27990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS27990;old_locus_tag=AD11_5157 NZ_JJLL01000041.1 Protein Homology CDS 10580 10895 . - 0 ID=cds-WP_148724987.1;Parent=gene-AD11_RS27990;Dbxref=GenBank:WP_148724987.1;Name=WP_148724987.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AD11_RS27990;product=IS3 family transposase;protein_id=WP_148724987.1;transl_table=11 NZ_JJLL01000041.1 Protein Homology CDS 9667 10580 . - 2 ID=cds-WP_148724987.1;Parent=gene-AD11_RS27990;Dbxref=GenBank:WP_148724987.1;Name=WP_148724987.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AD11_RS27990;product=IS3 family transposase;protein_id=WP_148724987.1;transl_table=11 ##sequence-region NZ_JJLL01000042.1 1 17162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000042.1 RefSeq region 1 17162 . + . ID=NZ_JJLL01000042.1:1..17162;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000042.1 RefSeq gene 1 299 . - . ID=gene-AD11_RS01440;Name=AD11_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01440;old_locus_tag=AD11_5159;partial=true;start_range=.,1 NZ_JJLL01000042.1 Protein Homology CDS 1 299 . - 0 ID=cds-WP_033866191.1;Parent=gene-AD11_RS01440;Dbxref=GenBank:WP_033866191.1;Name=WP_033866191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232082.1;locus_tag=AD11_RS01440;partial=true;product=ORF6N domain-containing protein;protein_id=WP_033866191.1;start_range=.,1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 620 949 . + . ID=gene-AD11_RS01445;Name=AD11_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01445 NZ_JJLL01000042.1 Protein Homology CDS 620 949 . + 0 ID=cds-WP_033865491.1;Parent=gene-AD11_RS01445;Dbxref=GenBank:WP_033865491.1;Name=WP_033865491.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015871332.1;locus_tag=AD11_RS01445;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_033865491.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 939 1247 . + . ID=gene-AD11_RS01450;Name=AD11_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01450;old_locus_tag=AD11_5160 NZ_JJLL01000042.1 Protein Homology CDS 939 1247 . + 0 ID=cds-WP_000147082.1;Parent=gene-AD11_RS01450;Dbxref=GenBank:WP_000147082.1;Name=WP_000147082.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147080.1;locus_tag=AD11_RS01450;product=helix-turn-helix domain-containing protein;protein_id=WP_000147082.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 1302 1547 . - . ID=gene-AD11_RS01455;Name=AD11_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01455;old_locus_tag=AD11_5161 NZ_JJLL01000042.1 Protein Homology CDS 1302 1547 . - 0 ID=cds-WP_000354247.1;Parent=gene-AD11_RS01455;Dbxref=GenBank:WP_000354247.1;Name=WP_000354247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001624507.1;locus_tag=AD11_RS01455;product=hypothetical protein;protein_id=WP_000354247.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 1546 2220 . + . ID=gene-AD11_RS01460;Name=AD11_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01460;old_locus_tag=AD11_5162 NZ_JJLL01000042.1 Protein Homology CDS 1546 2220 . + 0 ID=cds-WP_032144013.1;Parent=gene-AD11_RS01460;Dbxref=GenBank:WP_032144013.1;Name=WP_032144013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060692.1;locus_tag=AD11_RS01460;product=DUF4145 domain-containing protein;protein_id=WP_032144013.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 2253 2684 . - . ID=gene-AD11_RS01465;Name=AD11_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01465;old_locus_tag=AD11_5163 NZ_JJLL01000042.1 Protein Homology CDS 2253 2684 . - 0 ID=cds-WP_000196185.1;Parent=gene-AD11_RS01465;Dbxref=GenBank:WP_000196185.1;Name=WP_000196185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151118.1;locus_tag=AD11_RS01465;product=DUF977 family protein;protein_id=WP_000196185.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 2700 3470 . - . ID=gene-AD11_RS01470;Name=AD11_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01470;old_locus_tag=AD11_5164 NZ_JJLL01000042.1 Protein Homology CDS 2700 3470 . - 0 ID=cds-WP_032182512.1;Parent=gene-AD11_RS01470;Dbxref=GenBank:WP_032182512.1;Name=WP_032182512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001504535.1;locus_tag=AD11_RS01470;product=DUF1627 domain-containing protein;protein_id=WP_032182512.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 3496 4236 . - . ID=gene-AD11_RS01475;Name=AD11_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01475;old_locus_tag=AD11_5165 NZ_JJLL01000042.1 Protein Homology CDS 3496 4236 . - 0 ID=cds-WP_021571292.1;Parent=gene-AD11_RS01475;Dbxref=GenBank:WP_021571292.1;Name=WP_021571292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000789014.1;locus_tag=AD11_RS01475;product=ATP-binding protein;protein_id=WP_021571292.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 4243 5343 . - . ID=gene-AD11_RS01480;Name=AD11_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01480;old_locus_tag=AD11_5166 NZ_JJLL01000042.1 Protein Homology CDS 4243 5343 . - 0 ID=cds-WP_033866193.1;Parent=gene-AD11_RS01480;Dbxref=GenBank:WP_033866193.1;Name=WP_033866193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001390692.1;locus_tag=AD11_RS01480;product=DNA-binding protein;protein_id=WP_033866193.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 5364 5492 . - . ID=gene-AD11_RS32820;Name=AD11_RS32820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32820;old_locus_tag=AD11_5167 NZ_JJLL01000042.1 Protein Homology CDS 5364 5492 . - 0 ID=cds-WP_000438872.1;Parent=gene-AD11_RS32820;Dbxref=GenBank:WP_000438872.1;Name=WP_000438872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000438870.1;locus_tag=AD11_RS32820;product=hypothetical protein;protein_id=WP_000438872.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 5507 5803 . - . ID=gene-AD11_RS01485;Name=AD11_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01485;old_locus_tag=AD11_5168 NZ_JJLL01000042.1 Protein Homology CDS 5507 5803 . - 0 ID=cds-WP_000084293.1;Parent=gene-AD11_RS01485;Dbxref=GenBank:WP_000084293.1;Name=WP_000084293.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084293.1;locus_tag=AD11_RS01485;product=CII family transcriptional regulator;protein_id=WP_000084293.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 5920 6144 . - . ID=gene-AD11_RS01490;Name=AD11_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01490;old_locus_tag=AD11_5169 NZ_JJLL01000042.1 Protein Homology CDS 5920 6144 . - 0 ID=cds-WP_001054988.1;Parent=gene-AD11_RS01490;Dbxref=GenBank:WP_001054988.1;Name=WP_001054988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001054988.1;locus_tag=AD11_RS01490;product=transcriptional regulator;protein_id=WP_001054988.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 6255 6962 . + . ID=gene-AD11_RS01495;Name=AD11_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01495 NZ_JJLL01000042.1 Protein Homology CDS 6255 6962 . + 0 ID=cds-WP_001369130.1;Parent=gene-AD11_RS01495;Dbxref=GenBank:WP_001369130.1;Name=WP_001369130.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000846395.1;locus_tag=AD11_RS01495;product=XRE family transcriptional regulator;protein_id=WP_001369130.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 7115 7324 . - . ID=gene-AD11_RS01500;Name=AD11_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01500 NZ_JJLL01000042.1 Protein Homology CDS 7115 7324 . - 0 ID=cds-WP_024166114.1;Parent=gene-AD11_RS01500;Dbxref=GenBank:WP_024166114.1;Name=WP_024166114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000502039.1;locus_tag=AD11_RS01500;product=hypothetical protein;protein_id=WP_024166114.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 7670 7975 . + . ID=gene-AD11_RS01505;Name=AD11_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01505;old_locus_tag=AD11_5170 NZ_JJLL01000042.1 Protein Homology CDS 7670 7975 . + 0 ID=cds-WP_000256291.1;Parent=gene-AD11_RS01505;Dbxref=GenBank:WP_000256291.1;Name=WP_000256291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256291.1;locus_tag=AD11_RS01505;product=hypothetical protein;protein_id=WP_000256291.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 8186 8371 . + . ID=gene-AD11_RS01510;Name=AD11_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01510;old_locus_tag=AD11_5171 NZ_JJLL01000042.1 GeneMarkS-2+ CDS 8186 8371 . + 0 ID=cds-WP_001140061.1;Parent=gene-AD11_RS01510;Dbxref=GenBank:WP_001140061.1;Name=WP_001140061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS01510;product=hypothetical protein;protein_id=WP_001140061.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 8403 8762 . + . ID=gene-AD11_RS01515;Name=AD11_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01515;old_locus_tag=AD11_5172 NZ_JJLL01000042.1 Protein Homology CDS 8403 8762 . + 0 ID=cds-WP_001005964.1;Parent=gene-AD11_RS01515;Dbxref=GenBank:WP_001005964.1;Name=WP_001005964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005962.1;locus_tag=AD11_RS01515;product=hypothetical protein;protein_id=WP_001005964.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 8731 8940 . - . ID=gene-AD11_RS01520;Name=AD11_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01520;old_locus_tag=AD11_5173 NZ_JJLL01000042.1 Protein Homology CDS 8731 8940 . - 0 ID=cds-WP_000189938.1;Parent=gene-AD11_RS01520;Dbxref=GenBank:WP_000189938.1;Name=WP_000189938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189936.1;locus_tag=AD11_RS01520;product=hypothetical protein;protein_id=WP_000189938.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 9397 9618 . + . ID=gene-AD11_RS01525;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=AD11_RS01525;old_locus_tag=AD11_5174 NZ_JJLL01000042.1 Protein Homology CDS 9397 9618 . + 0 ID=cds-WP_000560214.1;Parent=gene-AD11_RS01525;Dbxref=GenBank:WP_000560214.1;Name=WP_000560214.1;Note=Rac prophage Kil protein%3B Kil overexpression leads to morphological defects and inhibits cell division;gbkey=CDS;gene=kil;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560214.1;locus_tag=AD11_RS01525;product=cell division protein FtsZ;protein_id=WP_000560214.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 9702 10088 . + . ID=gene-AD11_RS01530;Name=AD11_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01530;old_locus_tag=AD11_5175 NZ_JJLL01000042.1 Protein Homology CDS 9702 10088 . + 0 ID=cds-WP_016238038.1;Parent=gene-AD11_RS01530;Dbxref=GenBank:WP_016238038.1;Name=WP_016238038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000660961.1;locus_tag=AD11_RS01530;product=hypothetical protein;protein_id=WP_016238038.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 10196 12268 . + . ID=gene-AD11_RS01535;Name=AD11_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01535;old_locus_tag=AD11_5176 NZ_JJLL01000042.1 Protein Homology CDS 10196 12268 . + 0 ID=cds-WP_033865465.1;Parent=gene-AD11_RS01535;Dbxref=GenBank:WP_033865465.1;Name=WP_033865465.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001271580.1;locus_tag=AD11_RS01535;product=RecE family exodeoxyribonuclease;protein_id=WP_033865465.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 12265 12561 . + . ID=gene-AD11_RS01540;Name=AD11_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01540;old_locus_tag=AD11_5177 NZ_JJLL01000042.1 Protein Homology CDS 12265 12561 . + 0 ID=cds-WP_000995032.1;Parent=gene-AD11_RS01540;Dbxref=GenBank:WP_000995032.1;Name=WP_000995032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309203.2;locus_tag=AD11_RS01540;product=host-nuclease inhibitor Gam family protein;protein_id=WP_000995032.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 12567 13352 . + . ID=gene-AD11_RS01545;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=AD11_RS01545;old_locus_tag=AD11_5178 NZ_JJLL01000042.1 Protein Homology CDS 12567 13352 . + 0 ID=cds-WP_000100829.1;Parent=gene-AD11_RS01545;Dbxref=GenBank:WP_000100829.1;Name=WP_000100829.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309202.1;locus_tag=AD11_RS01545;product=phage recombination protein Bet;protein_id=WP_000100829.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 13349 14026 . + . ID=gene-AD11_RS01550;Name=AD11_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01550;old_locus_tag=AD11_5179 NZ_JJLL01000042.1 Protein Homology CDS 13349 14026 . + 0 ID=cds-WP_033865466.1;Parent=gene-AD11_RS01550;Dbxref=GenBank:WP_033865466.1;Name=WP_033865466.1;Ontology_term=GO:0004527,GO:0046872;gbkey=CDS;go_function=exonuclease activity|0004527||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311029.1;locus_tag=AD11_RS01550;product=lambda exonuclease family protein;protein_id=WP_033865466.1;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 14078 14329 . + . ID=gene-AD11_RS01555;Name=AD11_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01555;old_locus_tag=AD11_5180 NZ_JJLL01000042.1 Protein Homology CDS 14078 14329 . + 0 ID=cds-WP_000497817.1;Parent=gene-AD11_RS01555;Dbxref=GenBank:WP_000497817.1;Name=WP_000497817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563186.1;locus_tag=AD11_RS01555;product=DUF4222 domain-containing protein;protein_id=WP_000497817.1;transl_table=11 NZ_JJLL01000042.1 RefSeq pseudogene 14364 14459 . + . ID=gene-AD11_RS32345;Name=AD11_RS32345;end_range=14459,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32345;partial=true;pseudo=true NZ_JJLL01000042.1 Protein Homology CDS 14364 14459 . + 0 ID=cds-AD11_RS32345;Parent=gene-AD11_RS32345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=14459,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024139.6;locus_tag=AD11_RS32345;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 14591 15754 . + . ID=gene-AD11_RS01560;Name=intD;gbkey=Gene;gene=intD;gene_biotype=protein_coding;locus_tag=AD11_RS01560;old_locus_tag=AD11_5181 NZ_JJLL01000042.1 Protein Homology CDS 14591 15754 . + 0 ID=cds-WP_001387389.1;Parent=gene-AD11_RS01560;Dbxref=GenBank:WP_001387389.1;Name=WP_001387389.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=intD;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=AD11_RS01560;product=site-specific integrase;protein_id=WP_001387389.1;transl_table=11 NZ_JJLL01000042.1 RefSeq pseudogene 16258 16524 . + . ID=gene-AD11_RS01565;Name=AD11_RS01565;end_range=16524,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01565;partial=true;pseudo=true NZ_JJLL01000042.1 Protein Homology CDS 16258 16524 . + 0 ID=cds-AD11_RS01565;Parent=gene-AD11_RS01565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16524,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309278.1;locus_tag=AD11_RS01565;partial=true;product=antA/AntB antirepressor family protein;pseudo=true;transl_table=11 NZ_JJLL01000042.1 RefSeq gene 16792 17162 . + . ID=gene-AD11_RS01570;Name=AD11_RS01570;end_range=17162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01570;old_locus_tag=AD11_5183;partial=true NZ_JJLL01000042.1 Protein Homology CDS 16792 17162 . + 0 ID=cds-WP_033866194.1;Parent=gene-AD11_RS01570;Dbxref=GenBank:WP_033866194.1;Name=WP_033866194.1;end_range=17162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203825.1;locus_tag=AD11_RS01570;partial=true;product=antA/AntB antirepressor family protein;protein_id=WP_033866194.1;transl_table=11 ##sequence-region NZ_JJLL01000043.1 1 3518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000043.1 RefSeq region 1 3518 . + . ID=NZ_JJLL01000043.1:1..3518;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000043.1 RefSeq pseudogene 1 71 . - . ID=gene-AD11_RS32990;Name=AD11_RS32990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32990;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000043.1 Protein Homology CDS 1 71 . - 0 ID=cds-AD11_RS32990;Parent=gene-AD11_RS32990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829198.1;locus_tag=AD11_RS32990;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 113 313 . + . ID=gene-AD11_RS01580;Name=AD11_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01580;old_locus_tag=AD11_5184 NZ_JJLL01000043.1 Protein Homology CDS 113 313 . + 0 ID=cds-WP_000095740.1;Parent=gene-AD11_RS01580;Dbxref=GenBank:WP_000095740.1;Name=WP_000095740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AD11_RS01580;product=YlcI/YnfO family protein;protein_id=WP_000095740.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 445 771 . - . ID=gene-AD11_RS01585;Name=AD11_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01585;old_locus_tag=AD11_5185 NZ_JJLL01000043.1 Protein Homology CDS 445 771 . - 0 ID=cds-WP_000828068.1;Parent=gene-AD11_RS01585;Dbxref=GenBank:WP_000828068.1;Name=WP_000828068.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828066.1;locus_tag=AD11_RS01585;product=TonB family protein;protein_id=WP_000828068.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 1205 1462 . - . ID=gene-AD11_RS01600;Name=AD11_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01600;old_locus_tag=AD11_5186 NZ_JJLL01000043.1 Protein Homology CDS 1205 1462 . - 0 ID=cds-WP_001283919.1;Parent=gene-AD11_RS01600;Dbxref=GenBank:WP_001283919.1;Name=WP_001283919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283919.1;locus_tag=AD11_RS01600;product=hypothetical protein;protein_id=WP_001283919.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 1459 1956 . - . ID=gene-AD11_RS01605;Name=AD11_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01605;old_locus_tag=AD11_5187 NZ_JJLL01000043.1 Protein Homology CDS 1459 1956 . - 0 ID=cds-WP_024185488.1;Parent=gene-AD11_RS01605;Dbxref=GenBank:WP_024185488.1;Name=WP_024185488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001496757.1;locus_tag=AD11_RS01605;product=KilA-N domain-containing protein;protein_id=WP_024185488.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 2155 2484 . - . ID=gene-AD11_RS01610;Name=AD11_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01610;old_locus_tag=AD11_5188 NZ_JJLL01000043.1 Protein Homology CDS 2155 2484 . - 0 ID=cds-WP_001288263.1;Parent=gene-AD11_RS01610;Dbxref=GenBank:WP_001288263.1;Name=WP_001288263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001288263.1;locus_tag=AD11_RS01610;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001288263.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 2459 2689 . - . ID=gene-AD11_RS28025;Name=AD11_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS28025;old_locus_tag=AD11_5189 NZ_JJLL01000043.1 Protein Homology CDS 2459 2689 . - 0 ID=cds-WP_001300453.1;Parent=gene-AD11_RS28025;Dbxref=GenBank:WP_001300453.1;Name=WP_001300453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001343321.1;locus_tag=AD11_RS28025;product=ParD-like family protein;protein_id=WP_001300453.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 2831 3298 . - . ID=gene-AD11_RS01615;Name=AD11_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01615;old_locus_tag=AD11_5190 NZ_JJLL01000043.1 Protein Homology CDS 2831 3298 . - 0 ID=cds-WP_033865148.1;Parent=gene-AD11_RS01615;Dbxref=GenBank:WP_033865148.1;Name=WP_033865148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309813.1;locus_tag=AD11_RS01615;product=lysis protein;protein_id=WP_033865148.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 3300 3386 . - . ID=gene-AD11_RS01620;Name=AD11_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01620 NZ_JJLL01000043.1 Protein Homology CDS 3300 3386 . - 0 ID=cds-WP_032140280.1;Parent=gene-AD11_RS01620;Dbxref=GenBank:WP_032140280.1;Name=WP_032140280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AD11_RS01620;product=hypothetical protein;protein_id=WP_032140280.1;transl_table=11 NZ_JJLL01000043.1 RefSeq gene 3398 3514 . - . ID=gene-AD11_RS32350;Name=AD11_RS32350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32350;old_locus_tag=AD11_5191 NZ_JJLL01000043.1 Protein Homology CDS 3398 3514 . - 0 ID=cds-WP_000128890.1;Parent=gene-AD11_RS32350;Dbxref=GenBank:WP_000128890.1;Name=WP_000128890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000788411.1;locus_tag=AD11_RS32350;product=hypothetical protein;protein_id=WP_000128890.1;transl_table=11 ##sequence-region NZ_JJLL01000044.1 1 4509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000044.1 RefSeq region 1 4509 . + . ID=NZ_JJLL01000044.1:1..4509;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000044.1 RefSeq gene 503 2446 . + . ID=gene-AD11_RS01630;Name=AD11_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01630;old_locus_tag=AD11_5192 NZ_JJLL01000044.1 Protein Homology CDS 503 2446 . + 0 ID=cds-WP_032184487.1;Parent=gene-AD11_RS01630;Dbxref=GenBank:WP_032184487.1;Name=WP_032184487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309554.1;locus_tag=AD11_RS01630;product=SASA family carbohydrate esterase;protein_id=WP_032184487.1;transl_table=11 NZ_JJLL01000044.1 RefSeq gene 2596 2778 . + . ID=gene-AD11_RS01635;Name=AD11_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01635 NZ_JJLL01000044.1 Protein Homology CDS 2596 2778 . + 0 ID=cds-WP_032179376.1;Parent=gene-AD11_RS01635;Dbxref=GenBank:WP_032179376.1;Name=WP_032179376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001304601.1;locus_tag=AD11_RS01635;product=DUF1378 family protein;protein_id=WP_032179376.1;transl_table=11 NZ_JJLL01000044.1 RefSeq gene 2816 3085 . + . ID=gene-AD11_RS01640;Name=AD11_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01640;old_locus_tag=AD11_5194 NZ_JJLL01000044.1 Protein Homology CDS 2816 3085 . + 0 ID=cds-WP_033865087.1;Parent=gene-AD11_RS01640;Dbxref=GenBank:WP_033865087.1;Name=WP_033865087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309556.1;locus_tag=AD11_RS01640;product=DUF826 domain-containing protein;protein_id=WP_033865087.1;transl_table=11 NZ_JJLL01000044.1 RefSeq gene 3161 3376 . + . ID=gene-AD11_RS01645;Name=AD11_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01645;old_locus_tag=AD11_5195 NZ_JJLL01000044.1 Protein Homology CDS 3161 3376 . + 0 ID=cds-WP_000284510.1;Parent=gene-AD11_RS01645;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AD11_RS01645;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11 NZ_JJLL01000044.1 RefSeq gene 3381 3725 . + . ID=gene-AD11_RS01650;Name=AD11_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01650;old_locus_tag=AD11_5196 NZ_JJLL01000044.1 Protein Homology CDS 3381 3725 . + 0 ID=cds-WP_000731267.1;Parent=gene-AD11_RS01650;Dbxref=GenBank:WP_000731267.1;Name=WP_000731267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309558.1;locus_tag=AD11_RS01650;product=YdfR family protein;protein_id=WP_000731267.1;transl_table=11 NZ_JJLL01000044.1 RefSeq gene 3776 4309 . + . ID=gene-AD11_RS01655;Name=AD11_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01655;old_locus_tag=AD11_5197 NZ_JJLL01000044.1 Protein Homology CDS 3776 4309 . + 0 ID=cds-WP_033866196.1;Parent=gene-AD11_RS01655;Dbxref=GenBank:WP_033866196.1;Name=WP_033866196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310768.1;locus_tag=AD11_RS01655;product=lysozyme;protein_id=WP_033866196.1;transl_table=11 ##sequence-region NZ_JJLL01000045.1 1 1720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000045.1 RefSeq region 1 1720 . + . ID=NZ_JJLL01000045.1:1..1720;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000045.1 RefSeq gene 19 1194 . + . ID=gene-AD11_RS01660;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AD11_RS01660;old_locus_tag=AD11_5198 NZ_JJLL01000045.1 Protein Homology CDS 19 1194 . + 0 ID=cds-WP_000184541.1;Parent=gene-AD11_RS01660;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AD11_RS01660;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JJLL01000045.1 RefSeq gene 1348 1422 . - . ID=gene-AD11_RS01665;Name=AD11_RS01665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS01665;old_locus_tag=AD11_5199 NZ_JJLL01000045.1 tRNAscan-SE tRNA 1348 1422 . - . ID=rna-AD11_RS01665;Parent=gene-AD11_RS01665;anticodon=(pos:complement(1388..1390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS01665;product=tRNA-Gln NZ_JJLL01000045.1 tRNAscan-SE exon 1348 1422 . - . ID=exon-AD11_RS01665-1;Parent=rna-AD11_RS01665;anticodon=(pos:complement(1388..1390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS01665;product=tRNA-Gln NZ_JJLL01000045.1 RefSeq gene 1460 1534 . - . ID=gene-AD11_RS01670;Name=AD11_RS01670;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS01670;old_locus_tag=AD11_5200 NZ_JJLL01000045.1 tRNAscan-SE tRNA 1460 1534 . - . ID=rna-AD11_RS01670;Parent=gene-AD11_RS01670;anticodon=(pos:complement(1500..1502));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS01670;product=tRNA-Gln NZ_JJLL01000045.1 tRNAscan-SE exon 1460 1534 . - . ID=exon-AD11_RS01670-1;Parent=rna-AD11_RS01670;anticodon=(pos:complement(1500..1502));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS01670;product=tRNA-Gln NZ_JJLL01000045.1 RefSeq gene 1582 1658 . - . ID=gene-AD11_RS01675;Name=AD11_RS01675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS01675;old_locus_tag=AD11_5201 NZ_JJLL01000045.1 tRNAscan-SE tRNA 1582 1658 . - . ID=rna-AD11_RS01675;Parent=gene-AD11_RS01675;anticodon=(pos:complement(1622..1624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS01675;product=tRNA-Met NZ_JJLL01000045.1 tRNAscan-SE exon 1582 1658 . - . ID=exon-AD11_RS01675-1;Parent=rna-AD11_RS01675;anticodon=(pos:complement(1622..1624));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS01675;product=tRNA-Met ##sequence-region NZ_JJLL01000046.1 1 1883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000046.1 RefSeq region 1 1883 . + . ID=NZ_JJLL01000046.1:1..1883;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000046.1 RefSeq gene 153 839 . - . ID=gene-AD11_RS01680;Name=AD11_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01680;old_locus_tag=AD11_5202 NZ_JJLL01000046.1 Protein Homology CDS 153 839 . - 0 ID=cds-WP_000009225.1;Parent=gene-AD11_RS01680;Dbxref=GenBank:WP_000009225.1;Name=WP_000009225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232851.1;locus_tag=AD11_RS01680;product=DUF2726 domain-containing protein;protein_id=WP_000009225.1;transl_table=11 NZ_JJLL01000046.1 RefSeq gene 1423 1883 . - . ID=gene-AD11_RS01685;Name=AD11_RS01685;end_range=1883,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01685;old_locus_tag=AD11_5203;partial=true NZ_JJLL01000046.1 Protein Homology CDS 1423 1883 . - 2 ID=cds-WP_033866198.1;Parent=gene-AD11_RS01685;Dbxref=GenBank:WP_033866198.1;Name=WP_033866198.1;Ontology_term=GO:0005524;end_range=1883,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AD11_RS01685;partial=true;product=PhoH family protein;protein_id=WP_033866198.1;transl_table=11 ##sequence-region NZ_JJLL01000047.1 1 1629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000047.1 RefSeq region 1 1629 . + . ID=NZ_JJLL01000047.1:1..1629;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000047.1 RefSeq pseudogene 1 1629 . + . ID=gene-AD11_RS30380;Name=rhsB;end_range=1629,.;gbkey=Gene;gene=rhsB;gene_biotype=pseudogene;locus_tag=AD11_RS30380;old_locus_tag=AD11_5204;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000047.1 Protein Homology CDS 1 1629 . + 2 ID=cds-AD11_RS30380;Parent=gene-AD11_RS30380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1629,.;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AD11_RS30380;partial=true;product=rhs element protein RhsB;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000048.1 1 5758 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000048.1 RefSeq region 1 5758 . + . ID=NZ_JJLL01000048.1:1..5758;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000048.1 RefSeq pseudogene 1 201 . - . ID=gene-AD11_RS01695;Name=AD11_RS01695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01695;old_locus_tag=AD11_5205;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000048.1 Protein Homology CDS 1 201 . - 0 ID=cds-AD11_RS01695;Parent=gene-AD11_RS01695;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006939175.1;locus_tag=AD11_RS01695;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000048.1 RefSeq gene 248 1516 . - . ID=gene-AD11_RS01700;Name=AD11_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01700;old_locus_tag=AD11_5206 NZ_JJLL01000048.1 Protein Homology CDS 248 1516 . - 0 ID=cds-WP_000179845.1;Parent=gene-AD11_RS01700;Dbxref=GenBank:WP_000179845.1;Name=WP_000179845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020606.6;locus_tag=AD11_RS01700;product=DNA-binding domain-containing protein;protein_id=WP_000179845.1;transl_table=11 NZ_JJLL01000048.1 RefSeq gene 1591 2259 . - . ID=gene-AD11_RS01705;Name=AD11_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01705;old_locus_tag=AD11_5207 NZ_JJLL01000048.1 Protein Homology CDS 1591 2259 . - 0 ID=cds-WP_001300294.1;Parent=gene-AD11_RS01705;Dbxref=GenBank:WP_001300294.1;Name=WP_001300294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=AD11_RS01705;product=EAL domain-containing protein;protein_id=WP_001300294.1;transl_table=11 NZ_JJLL01000048.1 RefSeq gene 2295 2531 . - . ID=gene-AD11_RS01710;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=AD11_RS01710;old_locus_tag=AD11_5208 NZ_JJLL01000048.1 Protein Homology CDS 2295 2531 . - 0 ID=cds-WP_000993386.1;Parent=gene-AD11_RS01710;Dbxref=GenBank:WP_000993386.1;Name=WP_000993386.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102820.1;locus_tag=AD11_RS01710;product=broad-spectrum mercury transporter MerE;protein_id=WP_000993386.1;transl_table=11 NZ_JJLL01000048.1 RefSeq gene 2528 2890 . - . ID=gene-AD11_RS01715;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=AD11_RS01715;old_locus_tag=AD11_5209 NZ_JJLL01000048.1 Protein Homology CDS 2528 2890 . - 0 ID=cds-WP_001277456.1;Parent=gene-AD11_RS01715;Dbxref=GenBank:WP_001277456.1;Name=WP_001277456.1;Ontology_term=GO:0006355,GO:0045892,GO:0046689,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=AD11_RS01715;product=mercury resistance co-regulator MerD;protein_id=WP_001277456.1;transl_table=11 NZ_JJLL01000048.1 RefSeq pseudogene 2908 3417 . - . ID=gene-AD11_RS01720;Name=AD11_RS01720;end_range=3417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01720;old_locus_tag=AD11_5210;partial=true;pseudo=true NZ_JJLL01000048.1 Protein Homology CDS 2908 3417 . - 0 ID=cds-AD11_RS01720;Parent=gene-AD11_RS01720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3417,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1;locus_tag=AD11_RS01720;partial=true;product=mercury(II) reductase;pseudo=true;transl_table=11 NZ_JJLL01000048.1 RefSeq gene 3566 4426 . - . ID=gene-AD11_RS01725;Name=AD11_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01725;old_locus_tag=AD11_5211 NZ_JJLL01000048.1 Protein Homology CDS 3566 4426 . - 0 ID=cds-WP_000027057.1;Parent=gene-AD11_RS01725;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AD11_RS01725;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 NZ_JJLL01000048.1 RefSeq pseudogene 4609 4938 . - . ID=gene-AD11_RS01730;Name=AD11_RS01730;end_range=4938,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01730;partial=true;pseudo=true NZ_JJLL01000048.1 Protein Homology CDS 4609 4938 . - 0 ID=cds-AD11_RS01730;Parent=gene-AD11_RS01730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=4938,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=AD11_RS01730;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_JJLL01000048.1 RefSeq gene 4991 5695 . - . ID=gene-AD11_RS01735;Name=AD11_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01735;old_locus_tag=AD11_5213 NZ_JJLL01000048.1 Protein Homology CDS 4991 5695 . - 0 ID=cds-WP_001067855.1-5;Parent=gene-AD11_RS01735;Dbxref=GenBank:WP_001067855.1;Name=WP_001067855.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS01735;product=IS6-like element IS26 family transposase;protein_id=WP_001067855.1;transl_table=11 ##sequence-region NZ_JJLL01000049.1 1 6411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000049.1 RefSeq region 1 6411 . + . ID=NZ_JJLL01000049.1:1..6411;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000049.1 RefSeq pseudogene 1 241 . + . ID=gene-AD11_RS32175;Name=AD11_RS32175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32175;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000049.1 Protein Homology CDS 1 241 . + 1 ID=cds-AD11_RS32175;Parent=gene-AD11_RS32175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AD11_RS32175;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 246 386 . + . ID=gene-AD11_RS31900;Name=AD11_RS31900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31900;old_locus_tag=AD11_5215 NZ_JJLL01000049.1 Protein Homology CDS 246 386 . + 0 ID=cds-WP_001422058.1;Parent=gene-AD11_RS31900;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AD11_RS31900;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 379 549 . + . ID=gene-AD11_RS31905;Name=AD11_RS31905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31905;old_locus_tag=AD11_5216 NZ_JJLL01000049.1 Protein Homology CDS 379 549 . + 0 ID=cds-WP_164723201.1;Parent=gene-AD11_RS31905;Dbxref=GenBank:WP_164723201.1;Name=WP_164723201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AD11_RS31905;product=hypothetical protein;protein_id=WP_164723201.1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 574 816 . + . ID=gene-AD11_RS01745;Name=AD11_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01745;old_locus_tag=AD11_5217 NZ_JJLL01000049.1 Protein Homology CDS 574 816 . + 0 ID=cds-WP_032179868.1;Parent=gene-AD11_RS01745;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AD11_RS01745;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLL01000049.1 RefSeq pseudogene 1102 1377 . + . ID=gene-AD11_RS33115;Name=AD11_RS33115;end_range=1377,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33115;partial=true;pseudo=true NZ_JJLL01000049.1 Protein Homology CDS 1102 1377 . + 0 ID=cds-AD11_RS33115;Parent=gene-AD11_RS33115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1377,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017195.6;locus_tag=AD11_RS33115;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 1484 2011 . + . ID=gene-AD11_RS32360;Name=AD11_RS32360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32360 NZ_JJLL01000049.1 GeneMarkS-2+ CDS 1484 2011 . + 0 ID=cds-WP_051577871.1;Parent=gene-AD11_RS32360;Dbxref=GenBank:WP_051577871.1;Name=WP_051577871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32360;product=hypothetical protein;protein_id=WP_051577871.1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 2029 2466 . + . ID=gene-AD11_RS32365;Name=AD11_RS32365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32365 NZ_JJLL01000049.1 GeneMarkS-2+ CDS 2029 2466 . + 0 ID=cds-WP_051577874.1;Parent=gene-AD11_RS32365;Dbxref=GenBank:WP_051577874.1;Name=WP_051577874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32365;product=hypothetical protein;protein_id=WP_051577874.1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 2466 2825 . + . ID=gene-AD11_RS01755;Name=AD11_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01755;old_locus_tag=AD11_5219 NZ_JJLL01000049.1 Protein Homology CDS 2466 2825 . + 0 ID=cds-WP_001576265.1;Parent=gene-AD11_RS01755;Dbxref=GenBank:WP_001576265.1;Name=WP_001576265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001576265.1;locus_tag=AD11_RS01755;product=hypothetical protein;protein_id=WP_001576265.1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 2843 4054 . + . ID=gene-AD11_RS01760;Name=AD11_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01760;old_locus_tag=AD11_5220 NZ_JJLL01000049.1 Protein Homology CDS 2843 4054 . + 0 ID=cds-WP_033866208.1;Parent=gene-AD11_RS01760;Dbxref=GenBank:WP_033866208.1;Name=WP_033866208.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017518.6;locus_tag=AD11_RS01760;product=zonular occludens toxin domain-containing protein;protein_id=WP_033866208.1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 4386 4610 . - . ID=gene-AD11_RS31265;Name=AD11_RS31265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31265 NZ_JJLL01000049.1 GeneMarkS-2+ CDS 4386 4610 . - 0 ID=cds-WP_148724990.1;Parent=gene-AD11_RS31265;Dbxref=GenBank:WP_148724990.1;Name=WP_148724990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS31265;product=hypothetical protein;protein_id=WP_148724990.1;transl_table=11 NZ_JJLL01000049.1 RefSeq gene 4814 6022 . + . ID=gene-AD11_RS01765;Name=AD11_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01765;old_locus_tag=AD11_5223 NZ_JJLL01000049.1 Protein Homology CDS 4814 6022 . + 0 ID=cds-WP_077747060.1;Parent=gene-AD11_RS01765;Dbxref=GenBank:WP_077747060.1;Name=WP_077747060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575699.1;locus_tag=AD11_RS01765;product=type II secretion system protein GspD;protein_id=WP_077747060.1;transl_table=11 ##sequence-region NZ_JJLL01000050.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000050.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000050.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000050.1 RefSeq pseudogene 1 241 . + . ID=gene-AD11_RS32180;Name=AD11_RS32180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32180;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000050.1 Protein Homology CDS 1 241 . + 1 ID=cds-AD11_RS32180;Parent=gene-AD11_RS32180;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AD11_RS32180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000050.1 RefSeq gene 246 386 . + . ID=gene-AD11_RS31920;Name=AD11_RS31920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31920;old_locus_tag=AD11_5226 NZ_JJLL01000050.1 Protein Homology CDS 246 386 . + 0 ID=cds-WP_001422058.1-2;Parent=gene-AD11_RS31920;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AD11_RS31920;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLL01000050.1 RefSeq gene 379 549 . + . ID=gene-AD11_RS31925;Name=AD11_RS31925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31925;old_locus_tag=AD11_5227 NZ_JJLL01000050.1 Protein Homology CDS 379 549 . + 0 ID=cds-WP_164723201.1-2;Parent=gene-AD11_RS31925;Dbxref=GenBank:WP_164723201.1;Name=WP_164723201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AD11_RS31925;product=hypothetical protein;protein_id=WP_164723201.1;transl_table=11 NZ_JJLL01000050.1 RefSeq gene 574 816 . + . ID=gene-AD11_RS01780;Name=AD11_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01780;old_locus_tag=AD11_5228 NZ_JJLL01000050.1 Protein Homology CDS 574 816 . + 0 ID=cds-WP_032179868.1-2;Parent=gene-AD11_RS01780;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AD11_RS01780;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLL01000050.1 RefSeq pseudogene 877 2047 . + . ID=gene-AD11_RS31270;Name=AD11_RS31270;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31270;old_locus_tag=AD11_5229;partial=true;pseudo=true NZ_JJLL01000050.1 Protein Homology CDS 877 2047 . + 0 ID=cds-AD11_RS31270;Parent=gene-AD11_RS31270;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017195.6;locus_tag=AD11_RS31270;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000051.1 1 1052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000051.1 RefSeq region 1 1052 . + . ID=NZ_JJLL01000051.1:1..1052;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000051.1 RefSeq gene 1 441 . + . ID=gene-AD11_RS01790;Name=AD11_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01790;old_locus_tag=AD11_5230;partial=true;start_range=.,1 NZ_JJLL01000051.1 Protein Homology CDS 1 441 . + 0 ID=cds-WP_148724991.1;Parent=gene-AD11_RS01790;Dbxref=GenBank:WP_148724991.1;Name=WP_148724991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS01790;partial=true;product=IS66 family transposase;protein_id=WP_148724991.1;start_range=.,1;transl_table=11 NZ_JJLL01000051.1 RefSeq pseudogene 468 791 . + . ID=gene-AD11_RS01795;Name=AD11_RS01795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01795;old_locus_tag=AD11_5231;partial=true;pseudo=true;start_range=.,468 NZ_JJLL01000051.1 Protein Homology CDS 468 791 . + 0 ID=cds-AD11_RS01795;Parent=gene-AD11_RS01795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168353.1;locus_tag=AD11_RS01795;partial=true;product=ATP-binding domain-containing protein;pseudo=true;start_range=.,468;transl_table=11 NZ_JJLL01000051.1 RefSeq gene 893 1052 . - . ID=gene-AD11_RS28070;Name=AD11_RS28070;end_range=1052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS28070;old_locus_tag=AD11_5232;partial=true NZ_JJLL01000051.1 Protein Homology CDS 893 1052 . - 1 ID=cds-WP_001500370.1;Parent=gene-AD11_RS28070;Dbxref=GenBank:WP_001500370.1;Name=WP_001500370.1;end_range=1052,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS28070;partial=true;product=integrase core domain-containing protein;protein_id=WP_001500370.1;transl_table=11 ##sequence-region NZ_JJLL01000052.1 1 8008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000052.1 RefSeq region 1 8008 . + . ID=NZ_JJLL01000052.1:1..8008;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000052.1 RefSeq pseudogene 1 172 . - . ID=gene-AD11_RS31930;Name=AD11_RS31930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31930;old_locus_tag=AD11_5233;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000052.1 Protein Homology CDS 1 172 . - 0 ID=cds-AD11_RS31930;Parent=gene-AD11_RS31930;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310829.1;locus_tag=AD11_RS31930;partial=true;product=antirestriction protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000052.1 RefSeq gene 254 1075 . - . ID=gene-AD11_RS01805;Name=AD11_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01805;old_locus_tag=AD11_5234 NZ_JJLL01000052.1 Protein Homology CDS 254 1075 . - 0 ID=cds-WP_001234530.1;Parent=gene-AD11_RS01805;Dbxref=GenBank:WP_001234530.1;Name=WP_001234530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AD11_RS01805;product=DUF932 domain-containing protein;protein_id=WP_001234530.1;transl_table=11 NZ_JJLL01000052.1 RefSeq gene 1296 1706 . - . ID=gene-AD11_RS01810;Name=AD11_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01810;old_locus_tag=AD11_5236 NZ_JJLL01000052.1 Protein Homology CDS 1296 1706 . - 0 ID=cds-WP_000846713.1;Parent=gene-AD11_RS01810;Dbxref=GenBank:WP_000846713.1;Name=WP_000846713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310827.1;locus_tag=AD11_RS01810;product=hypothetical protein;protein_id=WP_000846713.1;transl_table=11 NZ_JJLL01000052.1 RefSeq pseudogene 1722 2406 . - . ID=gene-AD11_RS01815;Name=AD11_RS01815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01815;old_locus_tag=AD11_5237;pseudo=true NZ_JJLL01000052.1 Protein Homology CDS 1722 2406 . - 0 ID=cds-AD11_RS01815;Parent=gene-AD11_RS01815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310826.1;locus_tag=AD11_RS01815;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000052.1 RefSeq gene 2542 3612 . - . ID=gene-AD11_RS01820;Name=AD11_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01820;old_locus_tag=AD11_5238 NZ_JJLL01000052.1 Protein Homology CDS 2542 3612 . - 0 ID=cds-WP_000102643.1;Parent=gene-AD11_RS01820;Dbxref=GenBank:WP_000102643.1;Name=WP_000102643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309426.1;locus_tag=AD11_RS01820;product=patatin-like phospholipase family protein;protein_id=WP_000102643.1;transl_table=11 NZ_JJLL01000052.1 RefSeq gene 3609 4514 . - . ID=gene-AD11_RS01825;Name=AD11_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01825;old_locus_tag=AD11_5239 NZ_JJLL01000052.1 Protein Homology CDS 3609 4514 . - 0 ID=cds-WP_000203545.1;Parent=gene-AD11_RS01825;Dbxref=GenBank:WP_000203545.1;Name=WP_000203545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310824.1;locus_tag=AD11_RS01825;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_000203545.1;transl_table=11 NZ_JJLL01000052.1 RefSeq gene 4511 6907 . - . ID=gene-AD11_RS01830;Name=AD11_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01830;old_locus_tag=AD11_5240 NZ_JJLL01000052.1 Protein Homology CDS 4511 6907 . - 0 ID=cds-WP_001593464.1;Parent=gene-AD11_RS01830;Dbxref=GenBank:WP_001593464.1;Name=WP_001593464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544635.1;locus_tag=AD11_RS01830;product=dynamin family protein;protein_id=WP_001593464.1;transl_table=11 NZ_JJLL01000052.1 RefSeq gene 7125 7997 . - . ID=gene-AD11_RS01835;Name=AD11_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01835;old_locus_tag=AD11_5241 NZ_JJLL01000052.1 Protein Homology CDS 7125 7997 . - 0 ID=cds-WP_001069817.1;Parent=gene-AD11_RS01835;Dbxref=GenBank:WP_001069817.1;Name=WP_001069817.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708764.1;locus_tag=AD11_RS01835;product=GTPase family protein;protein_id=WP_001069817.1;transl_table=11 ##sequence-region NZ_JJLL01000053.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000053.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000053.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000053.1 RefSeq pseudogene 1 241 . + . ID=gene-AD11_RS32185;Name=AD11_RS32185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32185;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000053.1 Protein Homology CDS 1 241 . + 1 ID=cds-AD11_RS32185;Parent=gene-AD11_RS32185;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AD11_RS32185;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000053.1 RefSeq gene 246 386 . + . ID=gene-AD11_RS31940;Name=AD11_RS31940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31940;old_locus_tag=AD11_5243 NZ_JJLL01000053.1 Protein Homology CDS 246 386 . + 0 ID=cds-WP_001422058.1-3;Parent=gene-AD11_RS31940;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AD11_RS31940;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLL01000053.1 RefSeq gene 379 549 . + . ID=gene-AD11_RS31945;Name=AD11_RS31945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31945;old_locus_tag=AD11_5244 NZ_JJLL01000053.1 Protein Homology CDS 379 549 . + 0 ID=cds-WP_164723201.1-3;Parent=gene-AD11_RS31945;Dbxref=GenBank:WP_164723201.1;Name=WP_164723201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AD11_RS31945;product=hypothetical protein;protein_id=WP_164723201.1;transl_table=11 NZ_JJLL01000053.1 RefSeq gene 574 816 . + . ID=gene-AD11_RS01845;Name=AD11_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01845;old_locus_tag=AD11_5245 NZ_JJLL01000053.1 Protein Homology CDS 574 816 . + 0 ID=cds-WP_032179868.1-3;Parent=gene-AD11_RS01845;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AD11_RS01845;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLL01000053.1 RefSeq pseudogene 877 2047 . + . ID=gene-AD11_RS31275;Name=AD11_RS31275;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31275;old_locus_tag=AD11_5246;partial=true;pseudo=true NZ_JJLL01000053.1 Protein Homology CDS 877 2047 . + 0 ID=cds-AD11_RS31275;Parent=gene-AD11_RS31275;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017195.6;locus_tag=AD11_RS31275;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000054.1 1 10560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000054.1 RefSeq region 1 10560 . + . ID=NZ_JJLL01000054.1:1..10560;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000054.1 RefSeq pseudogene 1 832 . + . ID=gene-AD11_RS01855;Name=AD11_RS01855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01855;old_locus_tag=AD11_5247;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000054.1 Protein Homology CDS 1 832 . + 1 ID=cds-AD11_RS01855;Parent=gene-AD11_RS01855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS01855;partial=true;product=IS66-like element ISEc22 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000054.1 RefSeq pseudogene 886 1014 . - . ID=gene-AD11_RS31280;Name=AD11_RS31280;end_range=1014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31280;old_locus_tag=AD11_5248;partial=true;pseudo=true;start_range=.,886 NZ_JJLL01000054.1 Protein Homology CDS 886 1014 . - 0 ID=cds-AD11_RS31280;Parent=gene-AD11_RS31280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD11_RS31280;partial=true;product=IS91 family transposase;pseudo=true;start_range=.,886;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 1001 1138 . - . ID=gene-AD11_RS31950;Name=AD11_RS31950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31950 NZ_JJLL01000054.1 GeneMarkS-2+ CDS 1001 1138 . - 0 ID=cds-WP_033865056.1;Parent=gene-AD11_RS31950;Dbxref=GenBank:WP_033865056.1;Name=WP_033865056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS31950;product=hypothetical protein;protein_id=WP_033865056.1;transl_table=11 NZ_JJLL01000054.1 RefSeq pseudogene 1227 2003 . + . ID=gene-AD11_RS30400;Name=AD11_RS30400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30400;partial=true;pseudo=true;start_range=.,1227 NZ_JJLL01000054.1 Protein Homology CDS 1227 2003 . + 0 ID=cds-AD11_RS30400;Parent=gene-AD11_RS30400;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AD11_RS30400;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,1227;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 2065 3009 . - . ID=gene-AD11_RS01880;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AD11_RS01880;old_locus_tag=AD11_5251 NZ_JJLL01000054.1 Protein Homology CDS 2065 3009 . - 0 ID=cds-WP_033865058.1;Parent=gene-AD11_RS01880;Dbxref=GenBank:WP_033865058.1;Name=WP_033865058.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858371.1;locus_tag=AD11_RS01880;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_033865058.1;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 3074 4024 . - . ID=gene-AD11_RS01885;Name=virK;gbkey=Gene;gene=virK;gene_biotype=protein_coding;locus_tag=AD11_RS01885;old_locus_tag=AD11_5252 NZ_JJLL01000054.1 Protein Homology CDS 3074 4024 . - 0 ID=cds-WP_033865059.1;Parent=gene-AD11_RS01885;Dbxref=GenBank:WP_033865059.1;Name=WP_033865059.1;gbkey=CDS;gene=virK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858370.1;locus_tag=AD11_RS01885;product=virulence factor VirK;protein_id=WP_033865059.1;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 4029 5117 . - . ID=gene-AD11_RS27540;Name=capU;gbkey=Gene;gene=capU;gene_biotype=protein_coding;locus_tag=AD11_RS27540 NZ_JJLL01000054.1 Protein Homology CDS 4029 5117 . - 0 ID=cds-WP_064717534.1;Parent=gene-AD11_RS27540;Dbxref=GenBank:WP_064717534.1;Name=WP_064717534.1;gbkey=CDS;gene=capU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858369.1;locus_tag=AD11_RS27540;product=putative hexosyltransferase CapU;protein_id=WP_064717534.1;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 5120 5962 . - . ID=gene-AD11_RS01895;Name=AD11_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01895;old_locus_tag=AD11_5254 NZ_JJLL01000054.1 Protein Homology CDS 5120 5962 . - 0 ID=cds-WP_187439450.1;Parent=gene-AD11_RS01895;Dbxref=GenBank:WP_187439450.1;Name=WP_187439450.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858368.1;locus_tag=AD11_RS01895;product=polysaccharide deacetylase family protein;protein_id=WP_187439450.1;transl_table=11 NZ_JJLL01000054.1 RefSeq pseudogene 6206 6800 . - . ID=gene-AD11_RS01900;Name=AD11_RS01900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01900;old_locus_tag=AD11_5255;pseudo=true NZ_JJLL01000054.1 Protein Homology CDS 6206 6800 . - 0 ID=cds-AD11_RS01900;Parent=gene-AD11_RS01900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545742.1;locus_tag=AD11_RS01900;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 6800 7057 . - . ID=gene-AD11_RS01905;Name=AD11_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01905;old_locus_tag=AD11_5256 NZ_JJLL01000054.1 Protein Homology CDS 6800 7057 . - 0 ID=cds-WP_033865062.1;Parent=gene-AD11_RS01905;Dbxref=GenBank:WP_033865062.1;Name=WP_033865062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343099.1;locus_tag=AD11_RS01905;product=hypothetical protein;protein_id=WP_033865062.1;transl_table=11 NZ_JJLL01000054.1 RefSeq pseudogene 7554 7966 . + . ID=gene-AD11_RS28105;Name=AD11_RS28105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28105;pseudo=true NZ_JJLL01000054.1 Protein Homology CDS 7554 7966 . + 0 ID=cds-AD11_RS28105;Parent=gene-AD11_RS28105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536595.1;locus_tag=AD11_RS28105;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 7968 8696 . + . ID=gene-AD11_RS01910;Name=AD11_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01910;old_locus_tag=AD11_5257 NZ_JJLL01000054.1 Protein Homology CDS 7968 8696 . + 0 ID=cds-WP_033865065.1;Parent=gene-AD11_RS01910;Dbxref=GenBank:WP_033865065.1;Name=WP_033865065.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164196.1;locus_tag=AD11_RS01910;product=site-specific integrase;protein_id=WP_033865065.1;transl_table=11 NZ_JJLL01000054.1 RefSeq pseudogene 8707 8964 . - . ID=gene-AD11_RS01915;Name=AD11_RS01915;end_range=8964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01915;old_locus_tag=AD11_5258;partial=true;pseudo=true NZ_JJLL01000054.1 Protein Homology CDS 8707 8964 . - 0 ID=cds-AD11_RS01915;Parent=gene-AD11_RS01915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418698.1;locus_tag=AD11_RS01915;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000054.1 RefSeq gene 8996 10560 . - . ID=gene-AD11_RS01920;Name=tnpC;end_range=10560,.;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AD11_RS01920;old_locus_tag=AD11_5259;partial=true NZ_JJLL01000054.1 Protein Homology CDS 8996 10560 . - 2 ID=cds-WP_064735373.1-2;Parent=gene-AD11_RS01920;Dbxref=GenBank:WP_064735373.1;Name=WP_064735373.1;Ontology_term=GO:0004803;end_range=10560,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AD11_RS01920;partial=true;product=IS66 family transposase;protein_id=WP_064735373.1;transl_table=11 ##sequence-region NZ_JJLL01000055.1 1 4007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000055.1 RefSeq region 1 4007 . + . ID=NZ_JJLL01000055.1:1..4007;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000055.1 RefSeq gene 212 925 . + . ID=gene-AD11_RS01925;Name=AD11_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01925;old_locus_tag=AD11_5260 NZ_JJLL01000055.1 Protein Homology CDS 212 925 . + 0 ID=cds-WP_000235317.1;Parent=gene-AD11_RS01925;Dbxref=GenBank:WP_000235317.1;Name=WP_000235317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000290550.1;locus_tag=AD11_RS01925;product=phage antirepressor Ant;protein_id=WP_000235317.1;transl_table=11 NZ_JJLL01000055.1 RefSeq gene 1000 1722 . + . ID=gene-AD11_RS01930;Name=AD11_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01930;old_locus_tag=AD11_5261 NZ_JJLL01000055.1 Protein Homology CDS 1000 1722 . + 0 ID=cds-WP_001004036.1;Parent=gene-AD11_RS01930;Dbxref=GenBank:WP_001004036.1;Name=WP_001004036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309227.1;locus_tag=AD11_RS01930;product=phage antirepressor protein;protein_id=WP_001004036.1;transl_table=11 NZ_JJLL01000055.1 RefSeq gene 1722 2327 . + . ID=gene-AD11_RS01935;Name=AD11_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01935;old_locus_tag=AD11_5262 NZ_JJLL01000055.1 Protein Homology CDS 1722 2327 . + 0 ID=cds-WP_001107959.1;Parent=gene-AD11_RS01935;Dbxref=GenBank:WP_001107959.1;Name=WP_001107959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309228.1;locus_tag=AD11_RS01935;product=recombination protein NinG;protein_id=WP_001107959.1;transl_table=11 NZ_JJLL01000055.1 RefSeq gene 2371 2889 . + . ID=gene-AD11_RS01940;Name=AD11_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01940;old_locus_tag=AD11_5263 NZ_JJLL01000055.1 Protein Homology CDS 2371 2889 . + 0 ID=cds-WP_016237411.1;Parent=gene-AD11_RS01940;Dbxref=GenBank:WP_016237411.1;Name=WP_016237411.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973887.1;locus_tag=AD11_RS01940;product=antiterminator Q family protein;protein_id=WP_016237411.1;transl_table=11 NZ_JJLL01000055.1 RefSeq gene 3196 3627 . + . ID=gene-AD11_RS01945;Name=AD11_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01945;old_locus_tag=AD11_5265 NZ_JJLL01000055.1 Protein Homology CDS 3196 3627 . + 0 ID=cds-WP_016237410.1;Parent=gene-AD11_RS01945;Dbxref=GenBank:WP_016237410.1;Name=WP_016237410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309986.1;locus_tag=AD11_RS01945;product=tellurite resistance TerB family protein;protein_id=WP_016237410.1;transl_table=11 NZ_JJLL01000055.1 RefSeq gene 3624 3788 . + . ID=gene-AD11_RS30405;Name=AD11_RS30405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS30405;old_locus_tag=AD11_5266 NZ_JJLL01000055.1 Protein Homology CDS 3624 3788 . + 0 ID=cds-WP_000216690.1;Parent=gene-AD11_RS30405;Dbxref=GenBank:WP_000216690.1;Name=WP_000216690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216690.1;locus_tag=AD11_RS30405;product=DUF3927 family protein;protein_id=WP_000216690.1;transl_table=11 ##sequence-region NZ_JJLL01000056.1 1 2520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000056.1 RefSeq region 1 2520 . + . ID=NZ_JJLL01000056.1:1..2520;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000056.1 RefSeq gene 63 1571 . - . ID=gene-AD11_RS01955;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AD11_RS01955;old_locus_tag=AD11_5267 NZ_JJLL01000056.1 Protein Homology CDS 63 1571 . - 0 ID=cds-WP_001189111.1-3;Parent=gene-AD11_RS01955;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AD11_RS01955;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 NZ_JJLL01000056.1 RefSeq pseudogene 2244 2520 . - . ID=gene-AD11_RS01965;Name=AD11_RS01965;end_range=2520,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01965;old_locus_tag=AD11_5268;partial=true;pseudo=true;start_range=.,2244 NZ_JJLL01000056.1 Protein Homology CDS 2244 2520 . - 1 ID=cds-AD11_RS01965;Parent=gene-AD11_RS01965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS01965;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2244;transl_table=11 ##sequence-region NZ_JJLL01000057.1 1 1212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000057.1 RefSeq region 1 1212 . + . ID=NZ_JJLL01000057.1:1..1212;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000057.1 RefSeq pseudogene 1 218 . - . ID=gene-AD11_RS01970;Name=AD11_RS01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01970;old_locus_tag=AD11_5269;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000057.1 Protein Homology CDS 1 218 . - 0 ID=cds-AD11_RS01970;Parent=gene-AD11_RS01970;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AD11_RS01970;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000057.1 RefSeq gene 234 707 . - . ID=gene-AD11_RS01975;Name=AD11_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01975;old_locus_tag=AD11_5270 NZ_JJLL01000057.1 Protein Homology CDS 234 707 . - 0 ID=cds-WP_001538139.1;Parent=gene-AD11_RS01975;Dbxref=GenBank:WP_001538139.1;Name=WP_001538139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708769.2;locus_tag=AD11_RS01975;product=antirestriction protein;protein_id=WP_001538139.1;transl_table=11 NZ_JJLL01000057.1 RefSeq gene 769 945 . + . ID=gene-AD11_RS31955;Name=AD11_RS31955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31955;old_locus_tag=AD11_5271 NZ_JJLL01000057.1 Protein Homology CDS 769 945 . + 0 ID=cds-WP_187439451.1;Parent=gene-AD11_RS31955;Dbxref=GenBank:WP_187439451.1;Name=WP_187439451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001305392.1;locus_tag=AD11_RS31955;product=hypothetical protein;protein_id=WP_187439451.1;transl_table=11 NZ_JJLL01000057.1 RefSeq pseudogene 971 1212 . - . ID=gene-AD11_RS01985;Name=AD11_RS01985;end_range=1212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS01985;old_locus_tag=AD11_5272;partial=true;pseudo=true NZ_JJLL01000057.1 Protein Homology CDS 971 1212 . - 2 ID=cds-AD11_RS01985;Parent=gene-AD11_RS01985;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AD11_RS01985;partial=true;product=DUF932 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000058.1 1 4869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000058.1 RefSeq region 1 4869 . + . ID=NZ_JJLL01000058.1:1..4869;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000058.1 RefSeq gene 1 160 . + . ID=gene-AD11_RS01990;Name=AD11_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01990;old_locus_tag=AD11_5273;partial=true;start_range=.,1 NZ_JJLL01000058.1 Protein Homology CDS 1 160 . + 1 ID=cds-WP_033866216.1;Parent=gene-AD11_RS01990;Dbxref=GenBank:WP_033866216.1;Name=WP_033866216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309577.1;locus_tag=AD11_RS01990;partial=true;product=phage tail assembly chaperone;protein_id=WP_033866216.1;start_range=.,1;transl_table=11 NZ_JJLL01000058.1 RefSeq gene 184 465 . + . ID=gene-AD11_RS01995;Name=AD11_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS01995;old_locus_tag=AD11_5274 NZ_JJLL01000058.1 Protein Homology CDS 184 465 . + 0 ID=cds-WP_001234268.1-2;Parent=gene-AD11_RS01995;Dbxref=GenBank:WP_001234268.1;Name=WP_001234268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234272.1;locus_tag=AD11_RS01995;product=phage tail assembly protein T;protein_id=WP_001234268.1;transl_table=11 NZ_JJLL01000058.1 RefSeq gene 513 3755 . + . ID=gene-AD11_RS02000;Name=AD11_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02000;old_locus_tag=AD11_5275 NZ_JJLL01000058.1 Protein Homology CDS 513 3755 . + 0 ID=cds-WP_033866218.1;Parent=gene-AD11_RS02000;Dbxref=GenBank:WP_033866218.1;Name=WP_033866218.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304285.1;locus_tag=AD11_RS02000;product=phage tail tape measure protein;protein_id=WP_033866218.1;transl_table=11 NZ_JJLL01000058.1 RefSeq gene 3748 4089 . + . ID=gene-AD11_RS02005;Name=AD11_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02005;old_locus_tag=AD11_5276 NZ_JJLL01000058.1 Protein Homology CDS 3748 4089 . + 0 ID=cds-WP_000807924.1;Parent=gene-AD11_RS02005;Dbxref=GenBank:WP_000807924.1;Name=WP_000807924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310011.1;locus_tag=AD11_RS02005;product=phage tail protein;protein_id=WP_000807924.1;transl_table=11 NZ_JJLL01000058.1 RefSeq gene 4089 4787 . + . ID=gene-AD11_RS02010;Name=AD11_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02010;old_locus_tag=AD11_5277 NZ_JJLL01000058.1 Protein Homology CDS 4089 4787 . + 0 ID=cds-WP_032240517.1;Parent=gene-AD11_RS02010;Dbxref=GenBank:WP_032240517.1;Name=WP_032240517.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310191.1;locus_tag=AD11_RS02010;product=phage minor tail protein L;protein_id=WP_032240517.1;transl_table=11 NZ_JJLL01000058.1 RefSeq pseudogene 4798 4869 . + . ID=gene-AD11_RS31960;Name=AD11_RS31960;end_range=4869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31960;partial=true;pseudo=true NZ_JJLL01000058.1 Protein Homology CDS 4798 4869 . + 0 ID=cds-AD11_RS31960;Parent=gene-AD11_RS31960;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AD11_RS31960;partial=true;product=C40 family peptidase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000059.1 1 777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000059.1 RefSeq region 1 777 . + . ID=NZ_JJLL01000059.1:1..777;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000059.1 RefSeq gene 95 226 . + . ID=gene-AD11_RS27385;Name=AD11_RS27385;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27385 NZ_JJLL01000059.1 cmsearch ncRNA 95 226 . + . ID=rna-AD11_RS27385;Parent=gene-AD11_RS27385;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27385;product=RtT sRNA NZ_JJLL01000059.1 cmsearch exon 95 226 . + . ID=exon-AD11_RS27385-1;Parent=rna-AD11_RS27385;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27385;product=RtT sRNA NZ_JJLL01000059.1 RefSeq gene 273 404 . + . ID=gene-AD11_RS27390;Name=AD11_RS27390;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27390 NZ_JJLL01000059.1 cmsearch ncRNA 273 404 . + . ID=rna-AD11_RS27390;Parent=gene-AD11_RS27390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27390;product=RtT sRNA NZ_JJLL01000059.1 cmsearch exon 273 404 . + . ID=exon-AD11_RS27390-1;Parent=rna-AD11_RS27390;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27390;product=RtT sRNA NZ_JJLL01000059.1 RefSeq gene 451 582 . + . ID=gene-AD11_RS27395;Name=AD11_RS27395;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27395 NZ_JJLL01000059.1 cmsearch ncRNA 451 582 . + . ID=rna-AD11_RS27395;Parent=gene-AD11_RS27395;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27395;product=RtT sRNA NZ_JJLL01000059.1 cmsearch exon 451 582 . + . ID=exon-AD11_RS27395-1;Parent=rna-AD11_RS27395;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27395;product=RtT sRNA ##sequence-region NZ_JJLL01000060.1 1 4171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000060.1 RefSeq region 1 4171 . + . ID=NZ_JJLL01000060.1:1..4171;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000060.1 RefSeq gene 11 337 . + . ID=gene-AD11_RS02040;Name=AD11_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02040;old_locus_tag=AD11_5278 NZ_JJLL01000060.1 Protein Homology CDS 11 337 . + 0 ID=cds-WP_000828072.1;Parent=gene-AD11_RS02040;Dbxref=GenBank:WP_000828072.1;Name=WP_000828072.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828066.1;locus_tag=AD11_RS02040;product=TonB family protein;protein_id=WP_000828072.1;transl_table=11 NZ_JJLL01000060.1 RefSeq gene 469 669 . - . ID=gene-AD11_RS02045;Name=AD11_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02045;old_locus_tag=AD11_5279 NZ_JJLL01000060.1 Protein Homology CDS 469 669 . - 0 ID=cds-WP_000095743.1;Parent=gene-AD11_RS02045;Dbxref=GenBank:WP_000095743.1;Name=WP_000095743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AD11_RS02045;product=YlcI/YnfO family protein;protein_id=WP_000095743.1;transl_table=11 NZ_JJLL01000060.1 RefSeq gene 711 1076 . + . ID=gene-AD11_RS02050;Name=AD11_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02050;old_locus_tag=AD11_5280 NZ_JJLL01000060.1 Protein Homology CDS 711 1076 . + 0 ID=cds-WP_033866221.1;Parent=gene-AD11_RS02050;Dbxref=GenBank:WP_033866221.1;Name=WP_033866221.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309567.1;locus_tag=AD11_RS02050;product=HNH endonuclease;protein_id=WP_033866221.1;transl_table=11 NZ_JJLL01000060.1 RefSeq pseudogene 1366 1928 . + . ID=gene-AD11_RS02060;Name=AD11_RS02060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02060;pseudo=true NZ_JJLL01000060.1 Protein Homology CDS 1366 1928 . + 0 ID=cds-AD11_RS02060;Parent=gene-AD11_RS02060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309568.1;locus_tag=AD11_RS02060;product=terminase small subunit;pseudo=true;transl_table=11 NZ_JJLL01000060.1 RefSeq gene 1925 3586 . + . ID=gene-AD11_RS02065;Name=AD11_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02065;old_locus_tag=AD11_5283 NZ_JJLL01000060.1 Protein Homology CDS 1925 3586 . + 0 ID=cds-WP_033866222.1;Parent=gene-AD11_RS02065;Dbxref=GenBank:WP_033866222.1;Name=WP_033866222.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309569.1;locus_tag=AD11_RS02065;product=terminase large subunit;protein_id=WP_033866222.1;transl_table=11 NZ_JJLL01000060.1 RefSeq gene 3650 4171 . + . ID=gene-AD11_RS02070;Name=AD11_RS02070;end_range=4171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02070;old_locus_tag=AD11_5284;partial=true NZ_JJLL01000060.1 Protein Homology CDS 3650 4171 . + 0 ID=cds-WP_033866223.1;Parent=gene-AD11_RS02070;Dbxref=GenBank:WP_033866223.1;Name=WP_033866223.1;Ontology_term=GO:0006508,GO:0046797,GO:0008236;end_range=4171,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA,viral procapsid maturation|0046797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309570.1;locus_tag=AD11_RS02070;partial=true;product=HK97 family phage prohead protease;protein_id=WP_033866223.1;transl_table=11 ##sequence-region NZ_JJLL01000061.1 1 947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000061.1 RefSeq region 1 947 . + . ID=NZ_JJLL01000061.1:1..947;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000061.1 RefSeq pseudogene 1 401 . - . ID=gene-AD11_RS02075;Name=AD11_RS02075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02075;old_locus_tag=AD11_5285;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000061.1 Protein Homology CDS 1 401 . - 0 ID=cds-AD11_RS02075;Parent=gene-AD11_RS02075;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS02075;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000061.1 RefSeq pseudogene 419 625 . - . ID=gene-AD11_RS28115;Name=AD11_RS28115;end_range=625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28115;partial=true;pseudo=true NZ_JJLL01000061.1 Protein Homology CDS 419 625 . - 0 ID=cds-AD11_RS28115;Parent=gene-AD11_RS28115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=625,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AD11_RS28115;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000061.1 RefSeq gene 670 947 . - . ID=gene-AD11_RS02080;Name=AD11_RS02080;end_range=947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02080;partial=true NZ_JJLL01000061.1 Protein Homology CDS 670 947 . - 2 ID=cds-WP_032235767.1;Parent=gene-AD11_RS02080;Dbxref=GenBank:WP_032235767.1;Name=WP_032235767.1;Ontology_term=GO:0015074;end_range=947,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS02080;partial=true;product=integrase core domain-containing protein;protein_id=WP_032235767.1;transl_table=11 ##sequence-region NZ_JJLL01000062.1 1 1069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000062.1 RefSeq region 1 1069 . + . ID=NZ_JJLL01000062.1:1..1069;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000062.1 RefSeq pseudogene 106 249 . + . ID=gene-AD11_RS32375;Name=AD11_RS32375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32375;partial=true;pseudo=true;start_range=.,106 NZ_JJLL01000062.1 Protein Homology CDS 106 249 . + 0 ID=cds-AD11_RS32375;Parent=gene-AD11_RS32375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747467.1;locus_tag=AD11_RS32375;partial=true;product=hypothetical protein;pseudo=true;start_range=.,106;transl_table=11 ##sequence-region NZ_JJLL01000063.1 1 12204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000063.1 RefSeq region 1 12204 . + . ID=NZ_JJLL01000063.1:1..12204;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000063.1 RefSeq gene 1 250 . - . ID=gene-AD11_RS02090;Name=AD11_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02090;old_locus_tag=AD11_5288;partial=true;start_range=.,1 NZ_JJLL01000063.1 Protein Homology CDS 1 250 . - 0 ID=cds-WP_000567707.1-2;Parent=gene-AD11_RS02090;Dbxref=GenBank:WP_000567707.1;Name=WP_000567707.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AD11_RS02090;partial=true;product=transposase;protein_id=WP_000567707.1;start_range=.,1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 402 1388 . - . ID=gene-AD11_RS02095;Name=AD11_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02095;old_locus_tag=AD11_5289 NZ_JJLL01000063.1 Protein Homology CDS 402 1388 . - 0 ID=cds-WP_000274668.1;Parent=gene-AD11_RS02095;Dbxref=GenBank:WP_000274668.1;Name=WP_000274668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000274668.1;locus_tag=AD11_RS02095;product=sialate O-acetylesterase;protein_id=WP_000274668.1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 1488 2222 . + . ID=gene-AD11_RS02100;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AD11_RS02100;old_locus_tag=AD11_5290 NZ_JJLL01000063.1 Protein Homology CDS 1488 2222 . + 0 ID=cds-WP_033865044.1;Parent=gene-AD11_RS02100;Dbxref=GenBank:WP_033865044.1;Name=WP_033865044.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282578.1;locus_tag=AD11_RS02100;product=transcriptional regulator NanR;protein_id=WP_033865044.1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 2258 3193 . - . ID=gene-AD11_RS02105;Name=AD11_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02105;old_locus_tag=AD11_5291 NZ_JJLL01000063.1 Protein Homology CDS 2258 3193 . - 0 ID=cds-WP_001328061.1;Parent=gene-AD11_RS02105;Dbxref=GenBank:WP_001328061.1;Name=WP_001328061.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001305022.1;locus_tag=AD11_RS02105;product=alpha/beta hydrolase;protein_id=WP_001328061.1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 3243 4352 . - . ID=gene-AD11_RS02110;Name=AD11_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02110;old_locus_tag=AD11_5292 NZ_JJLL01000063.1 Protein Homology CDS 3243 4352 . - 0 ID=cds-WP_051577890.1;Parent=gene-AD11_RS02110;Dbxref=GenBank:WP_051577890.1;Name=WP_051577890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562716.1;locus_tag=AD11_RS02110;product=N-acetylneuraminate epimerase;protein_id=WP_051577890.1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 4365 5075 . - . ID=gene-AD11_RS02115;Name=AD11_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02115;old_locus_tag=AD11_5293 NZ_JJLL01000063.1 Protein Homology CDS 4365 5075 . - 0 ID=cds-WP_001296386.1;Parent=gene-AD11_RS02115;Dbxref=GenBank:WP_001296386.1;Name=WP_001296386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002431274.1;locus_tag=AD11_RS02115;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_001296386.1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 5121 5951 . - . ID=gene-AD11_RS02120;Name=AD11_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02120;old_locus_tag=AD11_5294 NZ_JJLL01000063.1 Protein Homology CDS 5121 5951 . - 0 ID=cds-WP_000948500.1;Parent=gene-AD11_RS02120;Dbxref=GenBank:WP_000948500.1;Name=WP_000948500.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000948499.1;locus_tag=AD11_RS02120;product=alpha/beta hydrolase;protein_id=WP_000948500.1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 5955 7427 . - . ID=gene-AD11_RS02125;Name=AD11_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02125;old_locus_tag=AD11_5295 NZ_JJLL01000063.1 Protein Homology CDS 5955 7427 . - 0 ID=cds-WP_000376547.1;Parent=gene-AD11_RS02125;Dbxref=GenBank:WP_000376547.1;Name=WP_000376547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376547.1;locus_tag=AD11_RS02125;product=MFS transporter;protein_id=WP_000376547.1;transl_table=11 NZ_JJLL01000063.1 RefSeq pseudogene 7476 8351 . - . ID=gene-AD11_RS02130;Name=AD11_RS02130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02130;pseudo=true NZ_JJLL01000063.1 Protein Homology CDS 7476 8351 . - 0 ID=cds-AD11_RS02130;Parent=gene-AD11_RS02130;Note=internal stop;Ontology_term=GO:0006051,GO:0005524,GO:0008270,GO:0009384;gbkey=CDS;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylmannosamine metabolic process|0006051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000629094.1;locus_tag=AD11_RS02130;product=N-acetylmannosamine kinase;pseudo=true;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 8396 9301 . - . ID=gene-AD11_RS02135;Name=AD11_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02135;old_locus_tag=AD11_5297 NZ_JJLL01000063.1 Protein Homology CDS 8396 9301 . - 0 ID=cds-WP_001149833.1;Parent=gene-AD11_RS02135;Dbxref=GenBank:WP_001149833.1;Name=WP_001149833.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562712.1;locus_tag=AD11_RS02135;product=N-acetylneuraminate lyase;protein_id=WP_001149833.1;transl_table=11 NZ_JJLL01000063.1 RefSeq pseudogene 9420 9818 . + . ID=gene-AD11_RS31290;Name=AD11_RS31290;end_range=9818,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31290;partial=true;pseudo=true NZ_JJLL01000063.1 Protein Homology CDS 9420 9818 . + 0 ID=cds-AD11_RS31290;Parent=gene-AD11_RS31290;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005154742.1;locus_tag=AD11_RS31290;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 9964 10389 . + . ID=gene-AD11_RS02150;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS02150;old_locus_tag=AD11_5298 NZ_JJLL01000063.1 Protein Homology CDS 9964 10389 . + 0 ID=cds-WP_000435655.1;Parent=gene-AD11_RS02150;Dbxref=GenBank:WP_000435655.1;Name=WP_000435655.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD11_RS02150;product=IS66-like element accessory protein TnpA;protein_id=WP_000435655.1;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 10386 10736 . + . ID=gene-AD11_RS02155;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS02155;old_locus_tag=AD11_5299 NZ_JJLL01000063.1 Protein Homology CDS 10386 10736 . + 0 ID=cds-WP_000624646.1;Parent=gene-AD11_RS02155;Dbxref=GenBank:WP_000624646.1;Name=WP_000624646.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AD11_RS02155;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624646.1;transl_table=11 NZ_JJLL01000063.1 RefSeq pseudogene 10767 11864 . + . ID=gene-AD11_RS31295;Name=tnpC;end_range=11864,.;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AD11_RS31295;old_locus_tag=AD11_5300;partial=true;pseudo=true NZ_JJLL01000063.1 Protein Homology CDS 10767 11864 . + 0 ID=cds-AD11_RS31295;Parent=gene-AD11_RS31295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=11864,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AD11_RS31295;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000063.1 RefSeq gene 11864 12204 . + . ID=gene-AD11_RS02165;Name=AD11_RS02165;end_range=12204,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02165;old_locus_tag=AD11_5301;partial=true NZ_JJLL01000063.1 Protein Homology CDS 11864 12204 . + 0 ID=cds-WP_033866225.1;Parent=gene-AD11_RS02165;Dbxref=GenBank:WP_033866225.1;Name=WP_033866225.1;Ontology_term=GO:0006313,GO:0032196,GO:0003677;end_range=12204,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA transposition|0006313||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AD11_RS02165;partial=true;product=transposase;protein_id=WP_033866225.1;transl_table=11 ##sequence-region NZ_JJLL01000064.1 1 18712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000064.1 RefSeq region 1 18712 . + . ID=NZ_JJLL01000064.1:1..18712;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000064.1 RefSeq gene 22 1184 . - . ID=gene-AD11_RS02170;Name=AD11_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02170;old_locus_tag=AD11_5302 NZ_JJLL01000064.1 Protein Homology CDS 923 1184 . - 0 ID=cds-WP_103852365.1-3;Parent=gene-AD11_RS02170;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS02170;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000064.1 Protein Homology CDS 22 923 . - 2 ID=cds-WP_103852365.1-3;Parent=gene-AD11_RS02170;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS02170;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000064.1 RefSeq pseudogene 1250 1504 . - . ID=gene-AD11_RS02180;Name=AD11_RS02180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02180;partial=true;pseudo=true;start_range=.,1250 NZ_JJLL01000064.1 Protein Homology CDS 1250 1504 . - 0 ID=cds-AD11_RS02180;Parent=gene-AD11_RS02180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589401.1;locus_tag=AD11_RS02180;partial=true;product=PAS domain-containing protein;pseudo=true;start_range=.,1250;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 1698 2081 . - . ID=gene-AD11_RS02185;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AD11_RS02185;old_locus_tag=AD11_5304 NZ_JJLL01000064.1 Protein Homology CDS 1698 2081 . - 0 ID=cds-WP_033865130.1;Parent=gene-AD11_RS02185;Dbxref=GenBank:WP_033865130.1;Name=WP_033865130.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151562.1;locus_tag=AD11_RS02185;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_033865130.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 2367 3014 . + . ID=gene-AD11_RS02190;Name=AD11_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02190;old_locus_tag=AD11_5305 NZ_JJLL01000064.1 Protein Homology CDS 2367 3014 . + 0 ID=cds-WP_000614282.1;Parent=gene-AD11_RS02190;Dbxref=GenBank:WP_000614282.1;Name=WP_000614282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243715.1;locus_tag=AD11_RS02190;product=transglycosylase SLT domain-containing protein;protein_id=WP_000614282.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 3311 4132 . - . ID=gene-AD11_RS02195;Name=AD11_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02195;old_locus_tag=AD11_5306 NZ_JJLL01000064.1 Protein Homology CDS 3311 4132 . - 0 ID=cds-WP_001234469.1;Parent=gene-AD11_RS02195;Dbxref=GenBank:WP_001234469.1;Name=WP_001234469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AD11_RS02195;product=DUF932 domain-containing protein;protein_id=WP_001234469.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 4251 4538 . - . ID=gene-AD11_RS02200;Name=AD11_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02200;old_locus_tag=AD11_5307 NZ_JJLL01000064.1 Protein Homology CDS 4251 4538 . - 0 ID=cds-WP_033866228.1;Parent=gene-AD11_RS02200;Dbxref=GenBank:WP_033866228.1;Name=WP_033866228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=AD11_RS02200;product=hypothetical protein;protein_id=WP_033866228.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 4563 4673 . - . ID=gene-AD11_RS32995;Name=AD11_RS32995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32995 NZ_JJLL01000064.1 Protein Homology CDS 4563 4673 . - 0 ID=cds-WP_033866230.1;Parent=gene-AD11_RS32995;Dbxref=GenBank:WP_033866230.1;Name=WP_033866230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001426400.1;locus_tag=AD11_RS32995;product=hypothetical protein;protein_id=WP_033866230.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 4705 5007 . - . ID=gene-AD11_RS02210;Name=AD11_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02210;old_locus_tag=AD11_5308 NZ_JJLL01000064.1 Protein Homology CDS 4705 5007 . - 0 ID=cds-WP_033864954.1;Parent=gene-AD11_RS02210;Dbxref=GenBank:WP_033864954.1;Name=WP_033864954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736722.1;locus_tag=AD11_RS02210;product=hypothetical protein;protein_id=WP_033864954.1;transl_table=11 NZ_JJLL01000064.1 RefSeq pseudogene 5031 5236 . - . ID=gene-AD11_RS33120;Name=AD11_RS33120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33120;pseudo=true NZ_JJLL01000064.1 Protein Homology CDS 5031 5236 . - 0 ID=cds-AD11_RS33120;Parent=gene-AD11_RS33120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AD11_RS33120;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLL01000064.1 RefSeq pseudogene 5307 5628 . + . ID=gene-AD11_RS02220;Name=AD11_RS02220;end_range=5628,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02220;partial=true;pseudo=true NZ_JJLL01000064.1 Protein Homology CDS 5307 5628 . + 0 ID=cds-AD11_RS02220;Parent=gene-AD11_RS02220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5628,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AD11_RS02220;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 5905 6030 . - . ID=gene-AD11_RS02225;Name=AD11_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02225 NZ_JJLL01000064.1 Protein Homology CDS 5905 6030 . - 0 ID=cds-WP_001372321.1-2;Parent=gene-AD11_RS02225;Dbxref=GenBank:WP_001372321.1;Name=WP_001372321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=AD11_RS02225;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_001372321.1;transl_table=11 NZ_JJLL01000064.1 RefSeq pseudogene 5972 6121 . - . ID=gene-AD11_RS32380;Name=mok;gbkey=Gene;gene=mok;gene_biotype=pseudogene;locus_tag=AD11_RS32380;partial=true;pseudo=true;start_range=.,5972 NZ_JJLL01000064.1 Protein Homology CDS 5972 6121 . - 0 ID=cds-AD11_RS32380;Parent=gene-AD11_RS32380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mok;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AD11_RS32380;partial=true;product=plasmid maintenance protein Mok;pseudo=true;start_range=.,5972;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 6143 6322 . + . ID=gene-AD11_RS31965;Name=AD11_RS31965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31965;old_locus_tag=AD11_5310 NZ_JJLL01000064.1 GeneMarkS-2+ CDS 6143 6322 . + 0 ID=cds-WP_001309233.1;Parent=gene-AD11_RS31965;Dbxref=GenBank:WP_001309233.1;Name=WP_001309233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS31965;product=hypothetical protein;protein_id=WP_001309233.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 6343 7203 . - . ID=gene-AD11_RS33125;Name=AD11_RS33125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33125;old_locus_tag=AD11_5311 NZ_JJLL01000064.1 Protein Homology CDS 6343 7203 . - 0 ID=cds-WP_077747052.1;Parent=gene-AD11_RS33125;Dbxref=GenBank:WP_077747052.1;Name=WP_077747052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AD11_RS33125;product=plasmid SOS inhibition protein A;protein_id=WP_077747052.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 7250 7651 . - . ID=gene-AD11_RS02235;Name=AD11_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02235;old_locus_tag=AD11_5312 NZ_JJLL01000064.1 Protein Homology CDS 7250 7651 . - 0 ID=cds-WP_033864956.1;Parent=gene-AD11_RS02235;Dbxref=GenBank:WP_033864956.1;Name=WP_033864956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AD11_RS02235;product=antirestriction protein;protein_id=WP_033864956.1;transl_table=11 NZ_JJLL01000064.1 RefSeq pseudogene 8067 8231 . - . ID=gene-AD11_RS31970;Name=AD11_RS31970;end_range=8231,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31970;old_locus_tag=AD11_5313;partial=true;pseudo=true NZ_JJLL01000064.1 Protein Homology CDS 8067 8231 . - 0 ID=cds-AD11_RS31970;Parent=gene-AD11_RS31970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8231,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858335.1;locus_tag=AD11_RS31970;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 8530 9501 . - . ID=gene-AD11_RS02245;Name=AD11_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02245;old_locus_tag=AD11_5314 NZ_JJLL01000064.1 Protein Homology CDS 8530 9501 . - 0 ID=cds-WP_001575734.1;Parent=gene-AD11_RS02245;Dbxref=GenBank:WP_001575734.1;Name=WP_001575734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817027.1;locus_tag=AD11_RS02245;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_001575734.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 9501 10667 . - . ID=gene-AD11_RS02250;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AD11_RS02250;old_locus_tag=AD11_5315 NZ_JJLL01000064.1 Protein Homology CDS 9501 10667 . - 0 ID=cds-WP_001238646.1;Parent=gene-AD11_RS02250;Dbxref=GenBank:WP_001238646.1;Name=WP_001238646.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AD11_RS02250;product=plasmid-partitioning protein SopA;protein_id=WP_001238646.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 10946 11977 . + . ID=gene-AD11_RS02255;Name=AD11_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02255;old_locus_tag=AD11_5317 NZ_JJLL01000064.1 Protein Homology CDS 10946 11977 . + 0 ID=cds-WP_033866231.1;Parent=gene-AD11_RS02255;Dbxref=GenBank:WP_033866231.1;Name=WP_033866231.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AD11_RS02255;product=IS630 family transposase;protein_id=WP_033866231.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 12279 13286 . + . ID=gene-AD11_RS02260;Name=AD11_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02260;old_locus_tag=AD11_5318 NZ_JJLL01000064.1 Protein Homology CDS 12279 13286 . + 0 ID=cds-WP_187439452.1;Parent=gene-AD11_RS02260;Dbxref=GenBank:WP_187439452.1;Name=WP_187439452.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014717.6;locus_tag=AD11_RS02260;product=ABC transporter permease;protein_id=WP_187439452.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 13283 14491 . + . ID=gene-AD11_RS02265;Name=AD11_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02265;old_locus_tag=AD11_5319 NZ_JJLL01000064.1 Protein Homology CDS 13283 14491 . + 0 ID=cds-WP_033864961.1;Parent=gene-AD11_RS02265;Dbxref=GenBank:WP_033864961.1;Name=WP_033864961.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=AD11_RS02265;product=TolC family protein;protein_id=WP_033864961.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 14454 15227 . + . ID=gene-AD11_RS02270;Name=AD11_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02270;old_locus_tag=AD11_5320 NZ_JJLL01000064.1 GeneMarkS-2+ CDS 14454 15227 . + 0 ID=cds-WP_143370820.1;Parent=gene-AD11_RS02270;Dbxref=GenBank:WP_143370820.1;Name=WP_143370820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS02270;product=hypothetical protein;protein_id=WP_143370820.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 15220 15852 . + . ID=gene-AD11_RS02275;Name=AD11_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02275;old_locus_tag=AD11_5321 NZ_JJLL01000064.1 Protein Homology CDS 15220 15852 . + 0 ID=cds-WP_032237875.1;Parent=gene-AD11_RS02275;Dbxref=GenBank:WP_032237875.1;Name=WP_032237875.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575727.1;locus_tag=AD11_RS02275;product=ATP-binding cassette domain-containing protein;protein_id=WP_032237875.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 15845 17113 . + . ID=gene-AD11_RS31325;Name=AD11_RS31325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31325;old_locus_tag=AD11_5322 NZ_JJLL01000064.1 GeneMarkS-2+ CDS 15845 17113 . + 0 ID=cds-WP_064734991.1;Parent=gene-AD11_RS31325;Dbxref=GenBank:WP_064734991.1;Name=WP_064734991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS31325;product=hypothetical protein;protein_id=WP_064734991.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 17962 18330 . + . ID=gene-AD11_RS27405;Name=AD11_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS27405 NZ_JJLL01000064.1 GeneMarkS-2+ CDS 17962 18330 . + 0 ID=cds-WP_001575724.1;Parent=gene-AD11_RS27405;Dbxref=GenBank:WP_001575724.1;Name=WP_001575724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS27405;product=hypothetical protein;protein_id=WP_001575724.1;transl_table=11 NZ_JJLL01000064.1 RefSeq gene 18419 18712 . - . ID=gene-AD11_RS32190;Name=AD11_RS32190;end_range=18712,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32190;partial=true NZ_JJLL01000064.1 GeneMarkS-2+ CDS 18419 18712 . - 0 ID=cds-WP_212602605.1;Parent=gene-AD11_RS32190;Dbxref=GenBank:WP_212602605.1;Name=WP_212602605.1;end_range=18712,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32190;partial=true;product=hypothetical protein;protein_id=WP_212602605.1;transl_table=11 ##sequence-region NZ_JJLL01000065.1 1 4657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000065.1 RefSeq region 1 4657 . + . ID=NZ_JJLL01000065.1:1..4657;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000065.1 RefSeq pseudogene 195 369 . + . ID=gene-AD11_RS28190;Name=AD11_RS28190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28190;partial=true;pseudo=true;start_range=.,195 NZ_JJLL01000065.1 Protein Homology CDS 195 369 . + 0 ID=cds-AD11_RS28190;Parent=gene-AD11_RS28190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AD11_RS28190;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,195;transl_table=11 NZ_JJLL01000065.1 RefSeq gene 469 903 . - . ID=gene-AD11_RS02290;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AD11_RS02290;old_locus_tag=AD11_5325 NZ_JJLL01000065.1 Protein Homology CDS 469 903 . - 0 ID=cds-WP_001575710.1;Parent=gene-AD11_RS02290;Dbxref=GenBank:WP_001575710.1;Name=WP_001575710.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AD11_RS02290;product=conjugation system SOS inhibitor PsiB;protein_id=WP_001575710.1;transl_table=11 NZ_JJLL01000065.1 RefSeq pseudogene 1698 1925 . - . ID=gene-AD11_RS02295;Name=AD11_RS02295;end_range=1925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02295;partial=true;pseudo=true NZ_JJLL01000065.1 Protein Homology CDS 1698 1925 . - 0 ID=cds-AD11_RS02295;Parent=gene-AD11_RS02295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=AD11_RS02295;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLL01000065.1 RefSeq pseudogene 1998 2557 . - . ID=gene-AD11_RS02300;Name=istB;end_range=2557,.;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AD11_RS02300;old_locus_tag=AD11_5327;partial=true;pseudo=true NZ_JJLL01000065.1 Protein Homology CDS 1998 2557 . - 0 ID=cds-AD11_RS02300;Parent=gene-AD11_RS02300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2557,.;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AD11_RS02300;partial=true;product=IS21-like element IS21 family helper ATPase IstB;pseudo=true;transl_table=11 NZ_JJLL01000065.1 RefSeq pseudogene 2660 2812 . - . ID=gene-AD11_RS28200;Name=AD11_RS28200;end_range=2812,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28200;partial=true;pseudo=true;start_range=.,2660 NZ_JJLL01000065.1 Protein Homology CDS 2660 2812 . - 0 ID=cds-AD11_RS28200;Parent=gene-AD11_RS28200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2812,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=AD11_RS28200;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,2660;transl_table=11 NZ_JJLL01000065.1 RefSeq gene 3583 4284 . + . ID=gene-AD11_RS02310;Name=AD11_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02310;old_locus_tag=AD11_5329 NZ_JJLL01000065.1 Protein Homology CDS 3583 4284 . + 0 ID=cds-WP_001575713.1;Parent=gene-AD11_RS02310;Dbxref=GenBank:WP_001575713.1;Name=WP_001575713.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724992.1;locus_tag=AD11_RS02310;product=replication initiation protein;protein_id=WP_001575713.1;transl_table=11 NZ_JJLL01000065.1 RefSeq gene 4431 4657 . + . ID=gene-AD11_RS02315;Name=AD11_RS02315;end_range=4657,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02315;old_locus_tag=AD11_5330;partial=true NZ_JJLL01000065.1 Protein Homology CDS 4431 4657 . + 0 ID=cds-WP_033866164.1-2;Parent=gene-AD11_RS02315;Dbxref=GenBank:WP_033866164.1;Name=WP_033866164.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4657,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS02315;partial=true;product=transposase;protein_id=WP_033866164.1;transl_table=11 ##sequence-region NZ_JJLL01000066.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000066.1 RefSeq region 1 608 . + . ID=NZ_JJLL01000066.1:1..608;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000066.1 RefSeq gene 63 194 . + . ID=gene-AD11_RS27410;Name=AD11_RS27410;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27410 NZ_JJLL01000066.1 cmsearch ncRNA 63 194 . + . ID=rna-AD11_RS27410;Parent=gene-AD11_RS27410;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27410;product=RtT sRNA NZ_JJLL01000066.1 cmsearch exon 63 194 . + . ID=exon-AD11_RS27410-1;Parent=rna-AD11_RS27410;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27410;product=RtT sRNA NZ_JJLL01000066.1 RefSeq gene 229 313 . + . ID=gene-AD11_RS02320;Name=AD11_RS02320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS02320;old_locus_tag=AD11_5331 NZ_JJLL01000066.1 tRNAscan-SE tRNA 229 313 . + . ID=rna-AD11_RS02320;Parent=gene-AD11_RS02320;anticodon=(pos:263..265);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS02320;product=tRNA-Tyr NZ_JJLL01000066.1 tRNAscan-SE exon 229 313 . + . ID=exon-AD11_RS02320-1;Parent=rna-AD11_RS02320;anticodon=(pos:263..265);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS02320;product=tRNA-Tyr NZ_JJLL01000066.1 RefSeq gene 357 488 . + . ID=gene-AD11_RS27415;Name=AD11_RS27415;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27415 NZ_JJLL01000066.1 cmsearch ncRNA 357 488 . + . ID=rna-AD11_RS27415;Parent=gene-AD11_RS27415;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27415;product=RtT sRNA NZ_JJLL01000066.1 cmsearch exon 357 488 . + . ID=exon-AD11_RS27415-1;Parent=rna-AD11_RS27415;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27415;product=RtT sRNA NZ_JJLL01000066.1 RefSeq gene 523 607 . + . ID=gene-AD11_RS02325;Name=AD11_RS02325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS02325;old_locus_tag=AD11_5332 NZ_JJLL01000066.1 tRNAscan-SE tRNA 523 607 . + . ID=rna-AD11_RS02325;Parent=gene-AD11_RS02325;anticodon=(pos:557..559);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS02325;product=tRNA-Tyr NZ_JJLL01000066.1 tRNAscan-SE exon 523 607 . + . ID=exon-AD11_RS02325-1;Parent=rna-AD11_RS02325;anticodon=(pos:557..559);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS02325;product=tRNA-Tyr ##sequence-region NZ_JJLL01000067.1 1 27188 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000067.1 RefSeq region 1 27188 . + . ID=NZ_JJLL01000067.1:1..27188;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000067.1 RefSeq gene 1 960 . + . ID=gene-AD11_RS02340;Name=AD11_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02340;old_locus_tag=AD11_5333;partial=true;start_range=.,1 NZ_JJLL01000067.1 Protein Homology CDS 1 960 . + 0 ID=cds-WP_244449530.1;Parent=gene-AD11_RS02340;Dbxref=GenBank:WP_244449530.1;Name=WP_244449530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514848.1;locus_tag=AD11_RS02340;partial=true;product=phage tail tip protein;protein_id=WP_244449530.1;start_range=.,1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 1177 1260 . + . ID=gene-AD11_RS31330;Name=AD11_RS31330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31330 NZ_JJLL01000067.1 Protein Homology CDS 1177 1260 . + 0 ID=cds-WP_106423901.1;Parent=gene-AD11_RS31330;Dbxref=GenBank:WP_106423901.1;Name=WP_106423901.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=AD11_RS31330;product=Hok/Gef family protein;protein_id=WP_106423901.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 1330 2709 . + . ID=gene-AD11_RS02345;Name=AD11_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02345;old_locus_tag=AD11_5335 NZ_JJLL01000067.1 Protein Homology CDS 1330 2709 . + 0 ID=cds-WP_071998670.1;Parent=gene-AD11_RS02345;Dbxref=GenBank:WP_071998670.1;Name=WP_071998670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539085.1;locus_tag=AD11_RS02345;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_071998670.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 2723 3298 . + . ID=gene-AD11_RS02350;Name=AD11_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02350;old_locus_tag=AD11_5336 NZ_JJLL01000067.1 Protein Homology CDS 2723 3298 . + 0 ID=cds-WP_033864951.1;Parent=gene-AD11_RS02350;Dbxref=GenBank:WP_033864951.1;Name=WP_033864951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000556902.1;locus_tag=AD11_RS02350;product=DUF4376 domain-containing protein;protein_id=WP_033864951.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 4101 5198 . + . ID=gene-AD11_RS02355;Name=AD11_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02355;old_locus_tag=AD11_5337 NZ_JJLL01000067.1 Protein Homology CDS 4101 5198 . + 0 ID=cds-WP_033864950.1;Parent=gene-AD11_RS02355;Dbxref=GenBank:WP_033864950.1;Name=WP_033864950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368540.1;locus_tag=AD11_RS02355;product=YadA C-terminal domain-containing protein;protein_id=WP_033864950.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 5287 5757 . + . ID=gene-AD11_RS02360;Name=AD11_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02360;old_locus_tag=AD11_5338 NZ_JJLL01000067.1 Protein Homology CDS 5287 5757 . + 0 ID=cds-WP_021565060.1;Parent=gene-AD11_RS02360;Dbxref=GenBank:WP_021565060.1;Name=WP_021565060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539080.1;locus_tag=AD11_RS02360;product=hypothetical protein;protein_id=WP_021565060.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 5811 5939 . + . ID=gene-AD11_RS32825;Name=AD11_RS32825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32825;old_locus_tag=AD11_5339 NZ_JJLL01000067.1 GeneMarkS-2+ CDS 5811 5939 . + 0 ID=cds-WP_256737684.1;Parent=gene-AD11_RS32825;Dbxref=GenBank:WP_256737684.1;Name=WP_256737684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32825;product=hypothetical protein;protein_id=WP_256737684.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 6120 7745 . + . ID=gene-AD11_RS02370;Name=AD11_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02370;old_locus_tag=AD11_5341 NZ_JJLL01000067.1 Protein Homology CDS 6120 7745 . + 0 ID=cds-WP_001146327.1;Parent=gene-AD11_RS02370;Dbxref=GenBank:WP_001146327.1;Name=WP_001146327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309259.2;locus_tag=AD11_RS02370;product=hypothetical protein;protein_id=WP_001146327.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 7742 9010 . + . ID=gene-AD11_RS02375;Name=AD11_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02375;old_locus_tag=AD11_5342 NZ_JJLL01000067.1 Protein Homology CDS 7742 9010 . + 0 ID=cds-WP_032181913.1;Parent=gene-AD11_RS02375;Dbxref=GenBank:WP_032181913.1;Name=WP_032181913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001539076.1;locus_tag=AD11_RS02375;product=phage tail tip fiber protein;protein_id=WP_032181913.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 9025 9306 . + . ID=gene-AD11_RS02380;Name=AD11_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02380 NZ_JJLL01000067.1 Protein Homology CDS 9025 9306 . + 0 ID=cds-WP_000852820.1;Parent=gene-AD11_RS02380;Dbxref=GenBank:WP_000852820.1;Name=WP_000852820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001369201.1;locus_tag=AD11_RS02380;product=hypothetical protein;protein_id=WP_000852820.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 9312 9929 . + . ID=gene-AD11_RS02385;Name=AD11_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02385;old_locus_tag=AD11_5344 NZ_JJLL01000067.1 Protein Homology CDS 9312 9929 . + 0 ID=cds-WP_033865460.1;Parent=gene-AD11_RS02385;Dbxref=GenBank:WP_033865460.1;Name=WP_033865460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309262.1;locus_tag=AD11_RS02385;product=hypothetical protein;protein_id=WP_033865460.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 10016 10747 . + . ID=gene-AD11_RS02390;Name=AD11_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02390;old_locus_tag=AD11_5345 NZ_JJLL01000067.1 Protein Homology CDS 10016 10747 . + 0 ID=cds-WP_033865459.1;Parent=gene-AD11_RS02390;Dbxref=GenBank:WP_033865459.1;Name=WP_033865459.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679673.1;locus_tag=AD11_RS02390;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_033865459.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 10978 11118 . + . ID=gene-AD11_RS02400;Name=AD11_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02400;old_locus_tag=AD11_5346 NZ_JJLL01000067.1 Protein Homology CDS 10978 11118 . + 0 ID=cds-WP_000078907.1;Parent=gene-AD11_RS02400;Dbxref=GenBank:WP_000078907.1;Name=WP_000078907.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078907.1;locus_tag=AD11_RS02400;product=Hok/Gef family protein;protein_id=WP_000078907.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 11175 11576 . + . ID=gene-AD11_RS02405;Name=AD11_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02405;old_locus_tag=AD11_5347 NZ_JJLL01000067.1 Protein Homology CDS 11175 11576 . + 0 ID=cds-WP_016232705.1;Parent=gene-AD11_RS02405;Dbxref=GenBank:WP_016232705.1;Name=WP_016232705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309264.1;locus_tag=AD11_RS02405;product=hypothetical protein;protein_id=WP_016232705.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 11670 12326 . + . ID=gene-AD11_RS02410;Name=AD11_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02410;old_locus_tag=AD11_5348 NZ_JJLL01000067.1 Protein Homology CDS 11670 12326 . + 0 ID=cds-WP_016232066.1;Parent=gene-AD11_RS02410;Dbxref=GenBank:WP_016232066.1;Name=WP_016232066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309265.1;locus_tag=AD11_RS02410;product=hypothetical protein;protein_id=WP_016232066.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 12329 12775 . + . ID=gene-AD11_RS02415;Name=AD11_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02415;old_locus_tag=AD11_5349 NZ_JJLL01000067.1 Protein Homology CDS 12329 12775 . + 0 ID=cds-WP_000455643.1;Parent=gene-AD11_RS02415;Dbxref=GenBank:WP_000455643.1;Name=WP_000455643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309266.1;locus_tag=AD11_RS02415;product=hypothetical protein;protein_id=WP_000455643.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 12785 13036 . + . ID=gene-AD11_RS02420;Name=AD11_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02420;old_locus_tag=AD11_5350 NZ_JJLL01000067.1 Protein Homology CDS 12785 13036 . + 0 ID=cds-WP_033865457.1;Parent=gene-AD11_RS02420;Dbxref=GenBank:WP_033865457.1;Name=WP_033865457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309267.1;locus_tag=AD11_RS02420;product=YMGG-like glycine zipper-containing protein;protein_id=WP_033865457.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 13047 14309 . + . ID=gene-AD11_RS02425;Name=AD11_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02425;old_locus_tag=AD11_5351 NZ_JJLL01000067.1 Protein Homology CDS 13047 14309 . + 0 ID=cds-WP_033865456.1;Parent=gene-AD11_RS02425;Dbxref=GenBank:WP_033865456.1;Name=WP_033865456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000012441.1;locus_tag=AD11_RS02425;product=hypothetical protein;protein_id=WP_033865456.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 14395 22758 . + . ID=gene-AD11_RS02430;Name=AD11_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02430;old_locus_tag=AD11_5352 NZ_JJLL01000067.1 Protein Homology CDS 14395 22758 . + 0 ID=cds-WP_033866235.1;Parent=gene-AD11_RS02430;Dbxref=GenBank:WP_033866235.1;Name=WP_033866235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232064.1;locus_tag=AD11_RS02430;product=LPD38 domain-containing protein;protein_id=WP_033866235.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 22909 23433 . + . ID=gene-AD11_RS02435;Name=AD11_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02435;old_locus_tag=AD11_5353 NZ_JJLL01000067.1 Protein Homology CDS 22909 23433 . + 0 ID=cds-WP_032144006.1;Parent=gene-AD11_RS02435;Dbxref=GenBank:WP_032144006.1;Name=WP_032144006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000742012.1;locus_tag=AD11_RS02435;product=Panacea domain-containing protein;protein_id=WP_032144006.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 23522 24166 . - . ID=gene-AD11_RS02440;Name=AD11_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02440;old_locus_tag=AD11_5354 NZ_JJLL01000067.1 Protein Homology CDS 23522 24166 . - 0 ID=cds-WP_000528463.1;Parent=gene-AD11_RS02440;Dbxref=GenBank:WP_000528463.1;Name=WP_000528463.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528463.1;locus_tag=AD11_RS02440;product=IbrB-like domain-containing protein;protein_id=WP_000528463.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 24151 25377 . - . ID=gene-AD11_RS02445;Name=AD11_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02445;old_locus_tag=AD11_5355 NZ_JJLL01000067.1 Protein Homology CDS 24151 25377 . - 0 ID=cds-WP_024192041.1;Parent=gene-AD11_RS02445;Dbxref=GenBank:WP_024192041.1;Name=WP_024192041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000017086.1;locus_tag=AD11_RS02445;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_024192041.1;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 25574 26203 . - . ID=gene-AD11_RS02450;Name=AD11_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02450;old_locus_tag=AD11_5356 NZ_JJLL01000067.1 Protein Homology CDS 25574 26203 . - 0 ID=cds-WP_032218632.1;Parent=gene-AD11_RS02450;Dbxref=GenBank:WP_032218632.1;Name=WP_032218632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309278.1;locus_tag=AD11_RS02450;product=antA/AntB antirepressor family protein;protein_id=WP_032218632.1;transl_table=11 NZ_JJLL01000067.1 RefSeq pseudogene 26471 26737 . - . ID=gene-AD11_RS02455;Name=AD11_RS02455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02455;partial=true;pseudo=true;start_range=.,26471 NZ_JJLL01000067.1 Protein Homology CDS 26471 26737 . - 0 ID=cds-AD11_RS02455;Parent=gene-AD11_RS02455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309278.1;locus_tag=AD11_RS02455;partial=true;product=antA/AntB antirepressor family protein;pseudo=true;start_range=.,26471;transl_table=11 NZ_JJLL01000067.1 RefSeq gene 26979 27188 . + . ID=gene-AD11_RS32195;Name=AD11_RS32195;end_range=27188,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32195;partial=true NZ_JJLL01000067.1 GeneMarkS-2+ CDS 26979 27188 . + 0 ID=cds-WP_204361721.1;Parent=gene-AD11_RS32195;Dbxref=GenBank:WP_204361721.1;Name=WP_204361721.1;end_range=27188,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32195;partial=true;product=hypothetical protein;protein_id=WP_204361721.1;transl_table=11 ##sequence-region NZ_JJLL01000068.1 1 1176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000068.1 RefSeq region 1 1176 . + . ID=NZ_JJLL01000068.1:1..1176;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000068.1 RefSeq gene 1 278 . + . ID=gene-AD11_RS02460;Name=AD11_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02460;partial=true;start_range=.,1 NZ_JJLL01000068.1 Protein Homology CDS 1 278 . + 2 ID=cds-WP_032235767.1-2;Parent=gene-AD11_RS02460;Dbxref=GenBank:WP_032235767.1;Name=WP_032235767.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS02460;partial=true;product=integrase core domain-containing protein;protein_id=WP_032235767.1;start_range=.,1;transl_table=11 NZ_JJLL01000068.1 RefSeq pseudogene 356 1168 . + . ID=gene-AD11_RS30435;Name=AD11_RS30435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30435;old_locus_tag=AD11_5359;partial=true;pseudo=true;start_range=.,356 NZ_JJLL01000068.1 Protein Homology CDS 356 1168 . + 0 ID=cds-AD11_RS30435;Parent=gene-AD11_RS30435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AD11_RS30435;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,356;transl_table=11 ##sequence-region NZ_JJLL01000069.1 1 2441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000069.1 RefSeq region 1 2441 . + . ID=NZ_JJLL01000069.1:1..2441;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000069.1 RefSeq gene 197 475 . + . ID=gene-AD11_RS33130;Name=AD11_RS33130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33130 NZ_JJLL01000069.1 Protein Homology CDS 197 475 . + 0 ID=cds-WP_065405051.1;Parent=gene-AD11_RS33130;Dbxref=GenBank:WP_065405051.1;Name=WP_065405051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AD11_RS33130;product=transposase;protein_id=WP_065405051.1;transl_table=11 NZ_JJLL01000069.1 RefSeq gene 472 819 . + . ID=gene-AD11_RS02480;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS02480;old_locus_tag=AD11_5360 NZ_JJLL01000069.1 Protein Homology CDS 472 819 . + 0 ID=cds-WP_000612591.1;Parent=gene-AD11_RS02480;Dbxref=GenBank:WP_000612591.1;Name=WP_000612591.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD11_RS02480;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612591.1;transl_table=11 NZ_JJLL01000069.1 RefSeq gene 869 2407 . + . ID=gene-AD11_RS02485;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AD11_RS02485;old_locus_tag=AD11_5361 NZ_JJLL01000069.1 Protein Homology CDS 869 2407 . + 0 ID=cds-WP_033866237.1;Parent=gene-AD11_RS02485;Dbxref=GenBank:WP_033866237.1;Name=WP_033866237.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AD11_RS02485;product=IS66 family transposase;protein_id=WP_033866237.1;transl_table=11 ##sequence-region NZ_JJLL01000070.1 1 1453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000070.1 RefSeq region 1 1453 . + . ID=NZ_JJLL01000070.1:1..1453;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000070.1 RefSeq gene 1 1175 . - . ID=gene-AD11_RS02490;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AD11_RS02490;old_locus_tag=AD11_5362;partial=true;start_range=.,1 NZ_JJLL01000070.1 Protein Homology CDS 1 1175 . - 0 ID=cds-WP_033866238.1;Parent=gene-AD11_RS02490;Dbxref=GenBank:WP_033866238.1;Name=WP_033866238.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AD11_RS02490;partial=true;product=purine nucleoside transporter PunC;protein_id=WP_033866238.1;start_range=.,1;transl_table=11 NZ_JJLL01000070.1 RefSeq gene 1288 1453 . + . ID=gene-AD11_RS28220;Name=AD11_RS28220;end_range=1453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS28220;old_locus_tag=AD11_5363;partial=true NZ_JJLL01000070.1 Protein Homology CDS 1288 1453 . + 0 ID=cds-WP_077756833.1;Parent=gene-AD11_RS28220;Dbxref=GenBank:WP_077756833.1;Name=WP_077756833.1;Ontology_term=GO:0006355,GO:0003700;end_range=1453,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020236337.1;locus_tag=AD11_RS28220;partial=true;product=LysR family transcriptional regulator;protein_id=WP_077756833.1;transl_table=11 ##sequence-region NZ_JJLL01000071.1 1 2833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000071.1 RefSeq region 1 2833 . + . ID=NZ_JJLL01000071.1:1..2833;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000071.1 RefSeq gene 1 1907 . - . ID=gene-AD11_RS02495;Name=AD11_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02495;old_locus_tag=AD11_5364;partial=true;start_range=.,1 NZ_JJLL01000071.1 Protein Homology CDS 1 1907 . - 0 ID=cds-WP_033866240.1;Parent=gene-AD11_RS02495;Dbxref=GenBank:WP_033866240.1;Name=WP_033866240.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309570.1;locus_tag=AD11_RS02495;partial=true;product=phage major capsid protein;protein_id=WP_033866240.1;start_range=.,1;transl_table=11 NZ_JJLL01000071.1 RefSeq gene 1971 2833 . - . ID=gene-AD11_RS02500;Name=AD11_RS02500;end_range=2833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02500;old_locus_tag=AD11_5365;partial=true NZ_JJLL01000071.1 Protein Homology CDS 1971 2833 . - 2 ID=cds-WP_033866241.1;Parent=gene-AD11_RS02500;Dbxref=GenBank:WP_033866241.1;Name=WP_033866241.1;Ontology_term=GO:0004519;end_range=2833,.;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309569.1;locus_tag=AD11_RS02500;partial=true;product=terminase TerL endonuclease subunit;protein_id=WP_033866241.1;transl_table=11 ##sequence-region NZ_JJLL01000072.1 1 5982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000072.1 RefSeq region 1 5982 . + . ID=NZ_JJLL01000072.1:1..5982;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000072.1 RefSeq gene 1 1006 . - . ID=gene-AD11_RS02505;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AD11_RS02505;old_locus_tag=AD11_5366;partial=true;start_range=.,1 NZ_JJLL01000072.1 Protein Homology CDS 1 1006 . - 0 ID=cds-WP_033866242.1;Parent=gene-AD11_RS02505;Dbxref=GenBank:WP_033866242.1;Name=WP_033866242.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310017.1;locus_tag=AD11_RS02505;partial=true;product=TipJ family phage tail tip protein;protein_id=WP_033866242.1;start_range=.,1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 1142 1669 . + . ID=gene-AD11_RS02510;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AD11_RS02510;old_locus_tag=AD11_5367 NZ_JJLL01000072.1 Protein Homology CDS 1142 1669 . + 0 ID=cds-WP_001530016.1;Parent=gene-AD11_RS02510;Dbxref=GenBank:WP_001530016.1;Name=WP_001530016.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455977.1;locus_tag=AD11_RS02510;product=superoxide dismutase family protein;protein_id=WP_001530016.1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 1911 2492 . - . ID=gene-AD11_RS02515;Name=AD11_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02515;old_locus_tag=AD11_5368 NZ_JJLL01000072.1 Protein Homology CDS 1911 2492 . - 0 ID=cds-WP_033866244.1;Parent=gene-AD11_RS02515;Dbxref=GenBank:WP_033866244.1;Name=WP_033866244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310263.2;locus_tag=AD11_RS02515;product=tail assembly protein;protein_id=WP_033866244.1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 2489 3226 . - . ID=gene-AD11_RS02520;Name=AD11_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02520;old_locus_tag=AD11_5369 NZ_JJLL01000072.1 Protein Homology CDS 2489 3226 . - 0 ID=cds-WP_033866245.1;Parent=gene-AD11_RS02520;Dbxref=GenBank:WP_033866245.1;Name=WP_033866245.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000967278.1;locus_tag=AD11_RS02520;product=C40 family peptidase;protein_id=WP_033866245.1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 3281 4183 . - . ID=gene-AD11_RS02525;Name=AD11_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02525;old_locus_tag=AD11_5370 NZ_JJLL01000072.1 Protein Homology CDS 3281 4183 . - 0 ID=cds-WP_033865096.1;Parent=gene-AD11_RS02525;Dbxref=GenBank:WP_033865096.1;Name=WP_033865096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001084296.1;locus_tag=AD11_RS02525;product=phage antirepressor N-terminal domain-containing protein;protein_id=WP_033865096.1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 4446 4598 . - . ID=gene-AD11_RS02530;Name=AD11_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02530 NZ_JJLL01000072.1 Protein Homology CDS 4446 4598 . - 0 ID=cds-WP_000410000.1;Parent=gene-AD11_RS02530;Dbxref=GenBank:WP_000410000.1;Name=WP_000410000.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410001.1;locus_tag=AD11_RS02530;product=Arc family DNA-binding protein;protein_id=WP_000410000.1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 4713 4961 . + . ID=gene-AD11_RS02535;Name=AD11_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02535;old_locus_tag=AD11_5371 NZ_JJLL01000072.1 Protein Homology CDS 4713 4961 . + 0 ID=cds-WP_001051912.1;Parent=gene-AD11_RS02535;Dbxref=GenBank:WP_001051912.1;Name=WP_001051912.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051912.1;locus_tag=AD11_RS02535;product=Arc family DNA-binding protein;protein_id=WP_001051912.1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 4961 5497 . + . ID=gene-AD11_RS02540;Name=AD11_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02540 NZ_JJLL01000072.1 Protein Homology CDS 4961 5497 . + 0 ID=cds-WP_000903306.1;Parent=gene-AD11_RS02540;Dbxref=GenBank:WP_000903306.1;Name=WP_000903306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554902.1;locus_tag=AD11_RS02540;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_000903306.1;transl_table=11 NZ_JJLL01000072.1 RefSeq gene 5554 5982 . - . ID=gene-AD11_RS02545;Name=AD11_RS02545;end_range=5982,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02545;old_locus_tag=AD11_5373;partial=true NZ_JJLL01000072.1 Protein Homology CDS 5554 5982 . - 0 ID=cds-WP_033866246.1;Parent=gene-AD11_RS02545;Dbxref=GenBank:WP_033866246.1;Name=WP_033866246.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;end_range=5982,.;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309143.1;locus_tag=AD11_RS02545;partial=true;product=phage minor tail protein L;protein_id=WP_033866246.1;transl_table=11 ##sequence-region NZ_JJLL01000073.1 1 6141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000073.1 RefSeq region 1 6141 . + . ID=NZ_JJLL01000073.1:1..6141;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000073.1 RefSeq gene 1 473 . - . ID=gene-AD11_RS02550;Name=AD11_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02550;old_locus_tag=AD11_5374;partial=true;start_range=.,1 NZ_JJLL01000073.1 Protein Homology CDS 1 473 . - 0 ID=cds-WP_033866248.1;Parent=gene-AD11_RS02550;Dbxref=GenBank:WP_033866248.1;Name=WP_033866248.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310012.1;locus_tag=AD11_RS02550;partial=true;product=phage minor tail protein L;protein_id=WP_033866248.1;start_range=.,1;transl_table=11 NZ_JJLL01000073.1 RefSeq gene 683 1846 . - . ID=gene-AD11_RS02555;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AD11_RS02555;old_locus_tag=AD11_5375 NZ_JJLL01000073.1 Protein Homology CDS 683 1846 . - 0 ID=cds-WP_033808196.1;Parent=gene-AD11_RS02555;Dbxref=GenBank:WP_033808196.1;Name=WP_033808196.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234522.1;locus_tag=AD11_RS02555;product=porin OmpC;protein_id=WP_033808196.1;transl_table=11 NZ_JJLL01000073.1 RefSeq gene 2053 2394 . - . ID=gene-AD11_RS02560;Name=AD11_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02560;old_locus_tag=AD11_5376 NZ_JJLL01000073.1 Protein Homology CDS 2053 2394 . - 0 ID=cds-WP_001672459.1;Parent=gene-AD11_RS02560;Dbxref=GenBank:WP_001672459.1;Name=WP_001672459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537072.1;locus_tag=AD11_RS02560;product=phage tail protein;protein_id=WP_001672459.1;transl_table=11 NZ_JJLL01000073.1 RefSeq gene 2387 5629 . - . ID=gene-AD11_RS02565;Name=AD11_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02565;old_locus_tag=AD11_5377 NZ_JJLL01000073.1 Protein Homology CDS 2387 5629 . - 0 ID=cds-WP_033866249.1;Parent=gene-AD11_RS02565;Dbxref=GenBank:WP_033866249.1;Name=WP_033866249.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304285.1;locus_tag=AD11_RS02565;product=phage tail tape measure protein;protein_id=WP_033866249.1;transl_table=11 NZ_JJLL01000073.1 RefSeq gene 5677 5958 . - . ID=gene-AD11_RS02570;Name=AD11_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02570;old_locus_tag=AD11_5378 NZ_JJLL01000073.1 Protein Homology CDS 5677 5958 . - 0 ID=cds-WP_001234268.1-3;Parent=gene-AD11_RS02570;Dbxref=GenBank:WP_001234268.1;Name=WP_001234268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234272.1;locus_tag=AD11_RS02570;product=phage tail assembly protein T;protein_id=WP_001234268.1;transl_table=11 NZ_JJLL01000073.1 RefSeq gene 5982 6141 . - . ID=gene-AD11_RS02575;Name=AD11_RS02575;end_range=6141,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02575;old_locus_tag=AD11_5379;partial=true NZ_JJLL01000073.1 Protein Homology CDS 5982 6141 . - 1 ID=cds-WP_033866216.1-2;Parent=gene-AD11_RS02575;Dbxref=GenBank:WP_033866216.1;Name=WP_033866216.1;end_range=6141,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309577.1;locus_tag=AD11_RS02575;partial=true;product=phage tail assembly chaperone;protein_id=WP_033866216.1;transl_table=11 ##sequence-region NZ_JJLL01000074.1 1 3552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000074.1 RefSeq region 1 3552 . + . ID=NZ_JJLL01000074.1:1..3552;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000074.1 RefSeq gene 1 1133 . + . ID=gene-AD11_RS02580;Name=AD11_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02580;old_locus_tag=AD11_5380;partial=true;start_range=.,1 NZ_JJLL01000074.1 Protein Homology CDS 1 1133 . + 2 ID=cds-WP_033866250.1;Parent=gene-AD11_RS02580;Dbxref=GenBank:WP_033866250.1;Name=WP_033866250.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS02580;partial=true;product=IS66-like element ISEc22 family transposase;protein_id=WP_033866250.1;start_range=.,1;transl_table=11 NZ_JJLL01000074.1 RefSeq gene 1252 1803 . + . ID=gene-AD11_RS02585;Name=AD11_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02585 NZ_JJLL01000074.1 Protein Homology CDS 1252 1803 . + 0 ID=cds-WP_248790897.1;Parent=gene-AD11_RS02585;Dbxref=GenBank:WP_248790897.1;Name=WP_248790897.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025027.6;locus_tag=AD11_RS02585;product=DUF4145 domain-containing protein;protein_id=WP_248790897.1;transl_table=11 NZ_JJLL01000074.1 RefSeq pseudogene 2651 2917 . - . ID=gene-AD11_RS02590;Name=AD11_RS02590;end_range=2917,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02590;partial=true;pseudo=true NZ_JJLL01000074.1 Protein Homology CDS 2651 2917 . - 0 ID=cds-AD11_RS02590;Parent=gene-AD11_RS02590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;end_range=2917,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015740474.1;locus_tag=AD11_RS02590;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000074.1 RefSeq pseudogene 2986 3195 . + . ID=gene-AD11_RS02595;Name=AD11_RS02595;end_range=3195,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02595;old_locus_tag=AD11_5384;partial=true;pseudo=true NZ_JJLL01000074.1 Protein Homology CDS 2986 3195 . + 0 ID=cds-AD11_RS02595;Parent=gene-AD11_RS02595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3195,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=AD11_RS02595;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLL01000074.1 RefSeq gene 3261 3552 . - . ID=gene-AD11_RS02600;Name=AD11_RS02600;end_range=3552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02600;old_locus_tag=AD11_5385;partial=true NZ_JJLL01000074.1 Protein Homology CDS 3261 3552 . - 1 ID=cds-WP_001405260.1;Parent=gene-AD11_RS02600;Dbxref=GenBank:WP_001405260.1;Name=WP_001405260.1;Ontology_term=GO:0005524;end_range=3552,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243248.1;locus_tag=AD11_RS02600;partial=true;product=ATP-binding protein;protein_id=WP_001405260.1;transl_table=11 ##sequence-region NZ_JJLL01000075.1 1 20664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000075.1 RefSeq region 1 20664 . + . ID=NZ_JJLL01000075.1:1..20664;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000075.1 RefSeq gene 1 698 . + . ID=gene-AD11_RS02605;Name=AD11_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02605;old_locus_tag=AD11_5386;partial=true;start_range=.,1 NZ_JJLL01000075.1 Protein Homology CDS 1 698 . + 2 ID=cds-WP_033866252.1;Parent=gene-AD11_RS02605;Dbxref=GenBank:WP_033866252.1;Name=WP_033866252.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AD11_RS02605;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_033866252.1;start_range=.,1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 752 835 . - . ID=gene-AD11_RS02610;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AD11_RS02610;old_locus_tag=AD11_5387 NZ_JJLL01000075.1 Protein Homology CDS 752 835 . - 0 ID=cds-WP_001295215.1;Parent=gene-AD11_RS02610;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AD11_RS02610;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 1575 1928 . + . ID=gene-AD11_RS02620;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AD11_RS02620;old_locus_tag=AD11_5389 NZ_JJLL01000075.1 Protein Homology CDS 1575 1928 . + 0 ID=cds-WP_000008957.1;Parent=gene-AD11_RS02620;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AD11_RS02620;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 1982 3271 . + . ID=gene-AD11_RS02625;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AD11_RS02625;old_locus_tag=AD11_5390 NZ_JJLL01000075.1 Protein Homology CDS 1982 3271 . + 0 ID=cds-WP_000922639.1;Parent=gene-AD11_RS02625;Dbxref=GenBank:WP_000922639.1;Name=WP_000922639.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AD11_RS02625;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_000922639.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 3284 3709 . + . ID=gene-AD11_RS02630;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AD11_RS02630;old_locus_tag=AD11_5391 NZ_JJLL01000075.1 Protein Homology CDS 3284 3709 . + 0 ID=cds-WP_000065769.1;Parent=gene-AD11_RS02630;Dbxref=GenBank:WP_000065769.1;Name=WP_000065769.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AD11_RS02630;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065769.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 3843 4139 . - . ID=gene-AD11_RS02635;Name=AD11_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02635;old_locus_tag=AD11_5392 NZ_JJLL01000075.1 Protein Homology CDS 3843 4139 . - 0 ID=cds-WP_001175589.1;Parent=gene-AD11_RS02635;Dbxref=GenBank:WP_001175589.1;Name=WP_001175589.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465662.1;locus_tag=AD11_RS02635;product=ArsR/SmtB family transcription factor;protein_id=WP_001175589.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 4246 5238 . + . ID=gene-AD11_RS02640;Name=AD11_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02640;old_locus_tag=AD11_5393 NZ_JJLL01000075.1 Protein Homology CDS 4246 5238 . + 0 ID=cds-WP_033865806.1;Parent=gene-AD11_RS02640;Dbxref=GenBank:WP_033865806.1;Name=WP_033865806.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100290.1;locus_tag=AD11_RS02640;product=permease;protein_id=WP_033865806.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 5818 7041 . + . ID=gene-AD11_RS02645;Name=AD11_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02645;old_locus_tag=AD11_5394 NZ_JJLL01000075.1 Protein Homology CDS 5818 7041 . + 0 ID=cds-WP_000020615.1;Parent=gene-AD11_RS02645;Dbxref=GenBank:WP_000020615.1;Name=WP_000020615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709288.1;locus_tag=AD11_RS02645;product=hypothetical protein;protein_id=WP_000020615.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 7288 7854 . + . ID=gene-AD11_RS02650;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AD11_RS02650;old_locus_tag=AD11_5395 NZ_JJLL01000075.1 Protein Homology CDS 7288 7854 . + 0 ID=cds-WP_001057453.1;Parent=gene-AD11_RS02650;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AD11_RS02650;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 8010 8540 . + . ID=gene-AD11_RS02655;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=AD11_RS02655;old_locus_tag=AD11_5396 NZ_JJLL01000075.1 Protein Homology CDS 8010 8540 . + 0 ID=cds-WP_000478619.1;Parent=gene-AD11_RS02655;Dbxref=GenBank:WP_000478619.1;Name=WP_000478619.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=dctR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AD11_RS02655;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478619.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 8582 9229 . - . ID=gene-AD11_RS02660;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=AD11_RS02660;old_locus_tag=AD11_5397 NZ_JJLL01000075.1 Protein Homology CDS 8582 9229 . - 0 ID=cds-WP_033866253.1;Parent=gene-AD11_RS02660;Dbxref=GenBank:WP_033866253.1;Name=WP_033866253.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AD11_RS02660;product=MgtC/SapB family protein;protein_id=WP_033866253.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 9293 9619 . - . ID=gene-AD11_RS02665;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AD11_RS02665;old_locus_tag=AD11_5398 NZ_JJLL01000075.1 Protein Homology CDS 9293 9619 . - 0 ID=cds-WP_001298717.1;Parent=gene-AD11_RS02665;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AD11_RS02665;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 9735 10067 . - . ID=gene-AD11_RS02670;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AD11_RS02670;old_locus_tag=AD11_5399 NZ_JJLL01000075.1 Protein Homology CDS 9735 10067 . - 0 ID=cds-WP_000756550.1;Parent=gene-AD11_RS02670;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AD11_RS02670;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 10322 10894 . + . ID=gene-AD11_RS02675;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AD11_RS02675;old_locus_tag=AD11_5400 NZ_JJLL01000075.1 Protein Homology CDS 10322 10894 . + 0 ID=cds-WP_000965672.1;Parent=gene-AD11_RS02675;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AD11_RS02675;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 11693 12220 . + . ID=gene-AD11_RS02680;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AD11_RS02680;old_locus_tag=AD11_5401 NZ_JJLL01000075.1 Protein Homology CDS 11693 12220 . + 0 ID=cds-WP_000576690.1;Parent=gene-AD11_RS02680;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AD11_RS02680;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 12221 12499 . - . ID=gene-AD11_RS02685;Name=AD11_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02685 NZ_JJLL01000075.1 Protein Homology CDS 12221 12499 . - 0 ID=cds-WP_033865807.1;Parent=gene-AD11_RS02685;Dbxref=GenBank:WP_033865807.1;Name=WP_033865807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AD11_RS02685;product=hypothetical protein;protein_id=WP_033865807.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 12607 13716 . + . ID=gene-AD11_RS02690;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AD11_RS02690;old_locus_tag=AD11_5402 NZ_JJLL01000075.1 Protein Homology CDS 12607 13716 . + 0 ID=cds-WP_001340474.1;Parent=gene-AD11_RS02690;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AD11_RS02690;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 13741 16854 . + . ID=gene-AD11_RS02695;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AD11_RS02695;old_locus_tag=AD11_5403 NZ_JJLL01000075.1 Protein Homology CDS 13741 16854 . + 0 ID=cds-WP_001506351.1;Parent=gene-AD11_RS02695;Dbxref=GenBank:WP_001506351.1;Name=WP_001506351.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AD11_RS02695;product=multidrug efflux pump RND permease MdtF;protein_id=WP_001506351.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 17217 17945 . - . ID=gene-AD11_RS02700;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AD11_RS02700;old_locus_tag=AD11_5404 NZ_JJLL01000075.1 Protein Homology CDS 17217 17945 . - 0 ID=cds-WP_000149999.1;Parent=gene-AD11_RS02700;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AD11_RS02700;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 18313 19137 . - . ID=gene-AD11_RS02705;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AD11_RS02705;old_locus_tag=AD11_5405 NZ_JJLL01000075.1 Protein Homology CDS 18313 19137 . - 0 ID=cds-WP_001191059.1;Parent=gene-AD11_RS02705;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AD11_RS02705;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11 NZ_JJLL01000075.1 RefSeq gene 19507 20664 . - . ID=gene-AD11_RS02710;Name=AD11_RS02710;end_range=20664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02710;old_locus_tag=AD11_5406;partial=true NZ_JJLL01000075.1 Protein Homology CDS 19507 20664 . - 0 ID=cds-WP_000607602.1;Parent=gene-AD11_RS02710;Dbxref=GenBank:WP_000607602.1;Name=WP_000607602.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;end_range=20664,.;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AD11_RS02710;partial=true;product=glutamate decarboxylase;protein_id=WP_000607602.1;transl_table=11 ##sequence-region NZ_JJLL01000076.1 1 17088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000076.1 RefSeq region 1 17088 . + . ID=NZ_JJLL01000076.1:1..17088;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000076.1 RefSeq gene 174 1286 . - . ID=gene-AD11_RS02715;Name=AD11_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02715;old_locus_tag=AD11_5407 NZ_JJLL01000076.1 Protein Homology CDS 174 1286 . - 0 ID=cds-WP_001300563.1;Parent=gene-AD11_RS02715;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS02715;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 1363 1515 . - . ID=gene-AD11_RS02720;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AD11_RS02720;old_locus_tag=AD11_5408 NZ_JJLL01000076.1 Protein Homology CDS 1363 1515 . - 0 ID=cds-WP_000956455.1;Parent=gene-AD11_RS02720;Dbxref=GenBank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AD11_RS02720;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11 NZ_JJLL01000076.1 RefSeq pseudogene 1484 1752 . + . ID=gene-AD11_RS33000;Name=AD11_RS33000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33000;pseudo=true NZ_JJLL01000076.1 Protein Homology CDS 1484 1752 . + 0 ID=cds-AD11_RS33000;Parent=gene-AD11_RS33000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008364.1;locus_tag=AD11_RS33000;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 1968 3086 . + . ID=gene-AD11_RS02730;Name=AD11_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02730;old_locus_tag=AD11_5409 NZ_JJLL01000076.1 Protein Homology CDS 1968 3086 . + 0 ID=cds-WP_001130654.1;Parent=gene-AD11_RS02730;Dbxref=GenBank:WP_001130654.1;Name=WP_001130654.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AD11_RS02730;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130654.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 3152 3400 . + . ID=gene-AD11_RS02735;Name=AD11_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02735;old_locus_tag=AD11_5410 NZ_JJLL01000076.1 Protein Homology CDS 3152 3400 . + 0 ID=cds-WP_000682514.1;Parent=gene-AD11_RS02735;Dbxref=GenBank:WP_000682514.1;Name=WP_000682514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=AD11_RS02735;product=DUF1158 domain-containing protein;protein_id=WP_000682514.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 3465 3833 . + . ID=gene-AD11_RS02740;Name=AD11_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02740;old_locus_tag=AD11_5411 NZ_JJLL01000076.1 Protein Homology CDS 3465 3833 . + 0 ID=cds-WP_000360951.1;Parent=gene-AD11_RS02740;Dbxref=GenBank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AD11_RS02740;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 3927 4580 . + . ID=gene-AD11_RS02745;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AD11_RS02745;old_locus_tag=AD11_5412 NZ_JJLL01000076.1 Protein Homology CDS 3927 4580 . + 0 ID=cds-WP_000351464.1;Parent=gene-AD11_RS02745;Dbxref=GenBank:WP_000351464.1;Name=WP_000351464.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=AD11_RS02745;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351464.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 4688 5935 . + . ID=gene-AD11_RS02750;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AD11_RS02750;old_locus_tag=AD11_5413 NZ_JJLL01000076.1 Protein Homology CDS 4688 5935 . + 0 ID=cds-WP_001153148.1;Parent=gene-AD11_RS02750;Dbxref=GenBank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AD11_RS02750;product=mechanosensitive ion channel YbdG;protein_id=WP_001153148.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 6003 7379 . - . ID=gene-AD11_RS02755;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AD11_RS02755;old_locus_tag=AD11_5414 NZ_JJLL01000076.1 Protein Homology CDS 6003 7379 . - 0 ID=cds-WP_000786311.1;Parent=gene-AD11_RS02755;Dbxref=GenBank:WP_000786311.1;Name=WP_000786311.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AD11_RS02755;product=phenylalanine transporter;protein_id=WP_000786311.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 7481 10624 . - . ID=gene-AD11_RS02760;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AD11_RS02760;old_locus_tag=AD11_5415 NZ_JJLL01000076.1 Protein Homology CDS 7481 10624 . - 0 ID=cds-WP_033866254.1;Parent=gene-AD11_RS02760;Dbxref=GenBank:WP_033866254.1;Name=WP_033866254.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AD11_RS02760;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_033866254.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 10636 11859 . - . ID=gene-AD11_RS02765;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AD11_RS02765;old_locus_tag=AD11_5416 NZ_JJLL01000076.1 Protein Homology CDS 10636 11859 . - 0 ID=cds-WP_000717157.1;Parent=gene-AD11_RS02765;Dbxref=GenBank:WP_000717157.1;Name=WP_000717157.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415106.1;locus_tag=AD11_RS02765;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_000717157.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 11875 12207 . - . ID=gene-AD11_RS02770;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AD11_RS02770;old_locus_tag=AD11_5417 NZ_JJLL01000076.1 Protein Homology CDS 11875 12207 . - 0 ID=cds-WP_000709865.1;Parent=gene-AD11_RS02770;Dbxref=GenBank:WP_000709865.1;Name=WP_000709865.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415105.1;locus_tag=AD11_RS02770;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709865.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 12365 13738 . - . ID=gene-AD11_RS02775;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AD11_RS02775;old_locus_tag=AD11_5418 NZ_JJLL01000076.1 Protein Homology CDS 12365 13738 . - 0 ID=cds-WP_000074234.1;Parent=gene-AD11_RS02775;Dbxref=GenBank:WP_000074234.1;Name=WP_000074234.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415104.1;locus_tag=AD11_RS02775;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074234.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 13895 14578 . + . ID=gene-AD11_RS02780;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AD11_RS02780;old_locus_tag=AD11_5419 NZ_JJLL01000076.1 Protein Homology CDS 13895 14578 . + 0 ID=cds-WP_000770953.1;Parent=gene-AD11_RS02780;Dbxref=GenBank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AD11_RS02780;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 14568 16016 . + . ID=gene-AD11_RS02785;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AD11_RS02785;old_locus_tag=AD11_5420 NZ_JJLL01000076.1 Protein Homology CDS 14568 16016 . + 0 ID=cds-WP_033866255.1;Parent=gene-AD11_RS02785;Dbxref=GenBank:WP_033866255.1;Name=WP_033866255.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739168.1;locus_tag=AD11_RS02785;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_033866255.1;transl_table=11 NZ_JJLL01000076.1 RefSeq gene 16753 17088 . + . ID=gene-AD11_RS02790;Name=AD11_RS02790;end_range=17088,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02790;old_locus_tag=AD11_5421;partial=true NZ_JJLL01000076.1 Protein Homology CDS 16753 17088 . + 0 ID=cds-WP_032228422.1;Parent=gene-AD11_RS02790;Dbxref=GenBank:WP_032228422.1;Name=WP_032228422.1;end_range=17088,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AD11_RS02790;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_032228422.1;transl_table=11 ##sequence-region NZ_JJLL01000077.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000077.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000077.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000077.1 RefSeq gene 1 172 . + . ID=gene-AD11_RS32385;Name=AD11_RS32385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32385;old_locus_tag=AD11_5422;partial=true;start_range=.,1 NZ_JJLL01000077.1 Protein Homology CDS 1 172 . + 1 ID=cds-WP_074471734.1;Parent=gene-AD11_RS32385;Dbxref=GenBank:WP_074471734.1;Name=WP_074471734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD11_RS32385;partial=true;product=glutamyl-tRNA synthetase;protein_id=WP_074471734.1;start_range=.,1;transl_table=11 NZ_JJLL01000077.1 RefSeq gene 224 616 . - . ID=gene-AD11_RS02795;Name=AD11_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02795;old_locus_tag=AD11_5423 NZ_JJLL01000077.1 Protein Homology CDS 224 616 . - 0 ID=cds-WP_000826503.1;Parent=gene-AD11_RS02795;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AD11_RS02795;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JJLL01000077.1 RefSeq gene 618 977 . - . ID=gene-AD11_RS02800;Name=AD11_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02800;old_locus_tag=AD11_5424 NZ_JJLL01000077.1 Protein Homology CDS 618 977 . - 0 ID=cds-WP_000472021.1;Parent=gene-AD11_RS02800;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AD11_RS02800;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JJLL01000077.1 RefSeq gene 1198 1273 . + . ID=gene-AD11_RS02805;Name=AD11_RS02805;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS02805;old_locus_tag=AD11_5425 NZ_JJLL01000077.1 tRNAscan-SE tRNA 1198 1273 . + . ID=rna-AD11_RS02805;Parent=gene-AD11_RS02805;anticodon=(pos:1231..1233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS02805;product=tRNA-Ala NZ_JJLL01000077.1 tRNAscan-SE exon 1198 1273 . + . ID=exon-AD11_RS02805-1;Parent=rna-AD11_RS02805;anticodon=(pos:1231..1233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS02805;product=tRNA-Ala NZ_JJLL01000077.1 RefSeq gene 1482 2047 . + . ID=gene-AD11_RS02810;Name=AD11_RS02810;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02810;old_locus_tag=AD11_5426;partial=true NZ_JJLL01000077.1 Protein Homology CDS 1482 2047 . + 0 ID=cds-WP_032231728.1;Parent=gene-AD11_RS02810;Dbxref=GenBank:WP_032231728.1;Name=WP_032231728.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311300.1;locus_tag=AD11_RS02810;partial=true;product=MASE1 domain-containing protein;protein_id=WP_032231728.1;transl_table=11 ##sequence-region NZ_JJLL01000078.1 1 3262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000078.1 RefSeq region 1 3262 . + . ID=NZ_JJLL01000078.1:1..3262;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000078.1 RefSeq gene 1 272 . + . ID=gene-AD11_RS02815;Name=AD11_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02815;partial=true;start_range=.,1 NZ_JJLL01000078.1 Protein Homology CDS 1 272 . + 2 ID=cds-WP_033866258.1;Parent=gene-AD11_RS02815;Dbxref=GenBank:WP_033866258.1;Name=WP_033866258.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309559.1;locus_tag=AD11_RS02815;partial=true;product=glycoside hydrolase family protein;protein_id=WP_033866258.1;start_range=.,1;transl_table=11 NZ_JJLL01000078.1 RefSeq gene 546 1241 . + . ID=gene-AD11_RS02820;Name=AD11_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02820;old_locus_tag=AD11_5427 NZ_JJLL01000078.1 Protein Homology CDS 546 1241 . + 0 ID=cds-WP_016237404.1;Parent=gene-AD11_RS02820;Dbxref=GenBank:WP_016237404.1;Name=WP_016237404.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000661712.1;locus_tag=AD11_RS02820;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_016237404.1;transl_table=11 NZ_JJLL01000078.1 RefSeq gene 1336 1467 . + . ID=gene-AD11_RS32830;Name=AD11_RS32830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32830;old_locus_tag=AD11_5429 NZ_JJLL01000078.1 Protein Homology CDS 1336 1467 . + 0 ID=cds-WP_001280935.1;Parent=gene-AD11_RS32830;Dbxref=GenBank:WP_001280935.1;Name=WP_001280935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280968.1;locus_tag=AD11_RS32830;product=hypothetical protein;protein_id=WP_001280935.1;transl_table=11 NZ_JJLL01000078.1 RefSeq gene 1431 1586 . + . ID=gene-AD11_RS32390;Name=AD11_RS32390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32390;old_locus_tag=AD11_5430 NZ_JJLL01000078.1 Protein Homology CDS 1431 1586 . + 0 ID=cds-WP_042004856.1;Parent=gene-AD11_RS32390;Dbxref=GenBank:WP_042004856.1;Name=WP_042004856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000788411.1;locus_tag=AD11_RS32390;product=hypothetical protein;protein_id=WP_042004856.1;transl_table=11 NZ_JJLL01000078.1 RefSeq gene 1598 1684 . + . ID=gene-AD11_RS02840;Name=AD11_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02840 NZ_JJLL01000078.1 Protein Homology CDS 1598 1684 . + 0 ID=cds-WP_032140280.1-2;Parent=gene-AD11_RS02840;Dbxref=GenBank:WP_032140280.1;Name=WP_032140280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AD11_RS02840;product=hypothetical protein;protein_id=WP_032140280.1;transl_table=11 NZ_JJLL01000078.1 RefSeq gene 1686 2153 . + . ID=gene-AD11_RS33135;Name=AD11_RS33135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33135;old_locus_tag=AD11_5431 NZ_JJLL01000078.1 Protein Homology CDS 1686 2153 . + 0 ID=cds-WP_001420468.1;Parent=gene-AD11_RS33135;Dbxref=GenBank:WP_001420468.1;Name=WP_001420468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309813.1;locus_tag=AD11_RS33135;product=lysis protein;protein_id=WP_001420468.1;transl_table=11 NZ_JJLL01000078.1 RefSeq gene 2492 2818 . + . ID=gene-AD11_RS02850;Name=AD11_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02850;old_locus_tag=AD11_5432 NZ_JJLL01000078.1 Protein Homology CDS 2492 2818 . + 0 ID=cds-WP_000828072.1-2;Parent=gene-AD11_RS02850;Dbxref=GenBank:WP_000828072.1;Name=WP_000828072.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828066.1;locus_tag=AD11_RS02850;product=TonB family protein;protein_id=WP_000828072.1;transl_table=11 NZ_JJLL01000078.1 RefSeq gene 2950 3150 . - . ID=gene-AD11_RS02855;Name=AD11_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02855;old_locus_tag=AD11_5433 NZ_JJLL01000078.1 Protein Homology CDS 2950 3150 . - 0 ID=cds-WP_000095741.1;Parent=gene-AD11_RS02855;Dbxref=GenBank:WP_000095741.1;Name=WP_000095741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AD11_RS02855;product=YlcI/YnfO family protein;protein_id=WP_000095741.1;transl_table=11 NZ_JJLL01000078.1 RefSeq pseudogene 3192 3262 . + . ID=gene-AD11_RS33005;Name=AD11_RS33005;end_range=3262,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33005;partial=true;pseudo=true NZ_JJLL01000078.1 Protein Homology CDS 3192 3262 . + 0 ID=cds-AD11_RS33005;Parent=gene-AD11_RS33005;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3262,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829198.1;locus_tag=AD11_RS33005;partial=true;product=HNH endonuclease;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000079.1 1 5309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000079.1 RefSeq region 1 5309 . + . ID=NZ_JJLL01000079.1:1..5309;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000079.1 RefSeq pseudogene 101 241 . - . ID=gene-AD11_RS32395;Name=AD11_RS32395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32395;partial=true;pseudo=true;start_range=.,101 NZ_JJLL01000079.1 Protein Homology CDS 101 241 . - 0 ID=cds-AD11_RS32395;Parent=gene-AD11_RS32395;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311526.1;locus_tag=AD11_RS32395;partial=true;product=hypothetical protein;pseudo=true;start_range=.,101;transl_table=11 NZ_JJLL01000079.1 RefSeq gene 312 647 . - . ID=gene-AD11_RS02865;Name=AD11_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02865;old_locus_tag=AD11_5434 NZ_JJLL01000079.1 Protein Homology CDS 312 647 . - 0 ID=cds-WP_016237409.1;Parent=gene-AD11_RS02865;Dbxref=GenBank:WP_016237409.1;Name=WP_016237409.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707425.1;locus_tag=AD11_RS02865;product=anti-adapter protein IraM;protein_id=WP_016237409.1;transl_table=11 NZ_JJLL01000079.1 RefSeq gene 908 2869 . + . ID=gene-AD11_RS02870;Name=AD11_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02870;old_locus_tag=AD11_5435 NZ_JJLL01000079.1 Protein Homology CDS 908 2869 . + 0 ID=cds-WP_033865150.1;Parent=gene-AD11_RS02870;Dbxref=GenBank:WP_033865150.1;Name=WP_033865150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234659.1;locus_tag=AD11_RS02870;product=SASA family carbohydrate esterase;protein_id=WP_033865150.1;transl_table=11 NZ_JJLL01000079.1 RefSeq gene 3006 3200 . + . ID=gene-AD11_RS02875;Name=AD11_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02875 NZ_JJLL01000079.1 Protein Homology CDS 3006 3200 . + 0 ID=cds-WP_000142785.1;Parent=gene-AD11_RS02875;Dbxref=GenBank:WP_000142785.1;Name=WP_000142785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142785.1;locus_tag=AD11_RS02875;product=DUF1378 family protein;protein_id=WP_000142785.1;transl_table=11 NZ_JJLL01000079.1 RefSeq gene 3226 3516 . + . ID=gene-AD11_RS02880;Name=AD11_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02880;old_locus_tag=AD11_5437 NZ_JJLL01000079.1 Protein Homology CDS 3226 3516 . + 0 ID=cds-WP_016237407.1;Parent=gene-AD11_RS02880;Dbxref=GenBank:WP_016237407.1;Name=WP_016237407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309238.2;locus_tag=AD11_RS02880;product=DUF826 domain-containing protein;protein_id=WP_016237407.1;transl_table=11 NZ_JJLL01000079.1 RefSeq gene 3592 3807 . + . ID=gene-AD11_RS02885;Name=AD11_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02885;old_locus_tag=AD11_5438 NZ_JJLL01000079.1 Protein Homology CDS 3592 3807 . + 0 ID=cds-WP_000284510.1-2;Parent=gene-AD11_RS02885;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AD11_RS02885;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11 NZ_JJLL01000079.1 RefSeq pseudogene 3812 4153 . + . ID=gene-AD11_RS32400;Name=AD11_RS32400;end_range=4153,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32400;partial=true;pseudo=true NZ_JJLL01000079.1 Protein Homology CDS 3812 4153 . + 0 ID=cds-AD11_RS32400;Parent=gene-AD11_RS32400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309558.1;locus_tag=AD11_RS32400;partial=true;product=YdfR family protein;pseudo=true;transl_table=11 NZ_JJLL01000079.1 RefSeq gene 4576 5109 . + . ID=gene-AD11_RS02895;Name=AD11_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02895;old_locus_tag=AD11_5440 NZ_JJLL01000079.1 Protein Homology CDS 4576 5109 . + 0 ID=cds-WP_033865149.1;Parent=gene-AD11_RS02895;Dbxref=GenBank:WP_033865149.1;Name=WP_033865149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309559.1;locus_tag=AD11_RS02895;product=lysozyme;protein_id=WP_033865149.1;transl_table=11 ##sequence-region NZ_JJLL01000080.1 1 4738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000080.1 RefSeq region 1 4738 . + . ID=NZ_JJLL01000080.1:1..4738;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000080.1 RefSeq gene 1 227 . - . ID=gene-AD11_RS02905;Name=AD11_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02905;old_locus_tag=AD11_5441;partial=true;start_range=.,1 NZ_JJLL01000080.1 Protein Homology CDS 1 227 . - 0 ID=cds-WP_033866164.1-3;Parent=gene-AD11_RS02905;Dbxref=GenBank:WP_033866164.1;Name=WP_033866164.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS02905;partial=true;product=transposase;protein_id=WP_033866164.1;start_range=.,1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 566 715 . + . ID=gene-AD11_RS27555;Name=AD11_RS27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS27555 NZ_JJLL01000080.1 Protein Homology CDS 566 715 . + 0 ID=cds-WP_001312851.1;Parent=gene-AD11_RS27555;Dbxref=GenBank:WP_001312851.1;Name=WP_001312851.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=AD11_RS27555;product=Hok/Gef family protein;protein_id=WP_001312851.1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 999 1256 . + . ID=gene-AD11_RS02910;Name=AD11_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02910;old_locus_tag=AD11_5442 NZ_JJLL01000080.1 Protein Homology CDS 999 1256 . + 0 ID=cds-WP_000083826.1;Parent=gene-AD11_RS02910;Dbxref=GenBank:WP_000083826.1;Name=WP_000083826.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083822.1;locus_tag=AD11_RS02910;product=replication regulatory protein RepA;protein_id=WP_000083826.1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 1292 1525 . - . ID=gene-AD11_RS32405;Name=AD11_RS32405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32405 NZ_JJLL01000080.1 Protein Homology CDS 1292 1525 . - 0 ID=cds-WP_235802309.1;Parent=gene-AD11_RS32405;Dbxref=GenBank:WP_235802309.1;Name=WP_235802309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001410080.1;locus_tag=AD11_RS32405;product=replication protein RepA;protein_id=WP_235802309.1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 1516 1563 . + . ID=gene-AD11_RS32410;Name=AD11_RS32410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32410 NZ_JJLL01000080.1 Protein Homology CDS 1516 1563 . + 0 ID=cds-WP_234812421.1;Parent=gene-AD11_RS32410;Dbxref=GenBank:WP_234812421.1;Name=WP_234812421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=AD11_RS32410;product=hypothetical protein;protein_id=WP_234812421.1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 1556 2413 . + . ID=gene-AD11_RS02915;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AD11_RS02915;old_locus_tag=AD11_5443 NZ_JJLL01000080.1 Protein Homology CDS 1556 2413 . + 0 ID=cds-WP_033865018.1;Parent=gene-AD11_RS02915;Dbxref=GenBank:WP_033865018.1;Name=WP_033865018.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AD11_RS02915;product=incFII family plasmid replication initiator RepA;protein_id=WP_033865018.1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 3114 3254 . + . ID=gene-AD11_RS31980;Name=AD11_RS31980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31980;old_locus_tag=AD11_5444 NZ_JJLL01000080.1 Protein Homology CDS 3114 3254 . + 0 ID=cds-WP_187439454.1;Parent=gene-AD11_RS31980;Dbxref=GenBank:WP_187439454.1;Name=WP_187439454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004031751.1;locus_tag=AD11_RS31980;product=hypothetical protein;protein_id=WP_187439454.1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 3378 3629 . + . ID=gene-AD11_RS02920;Name=AD11_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02920;old_locus_tag=AD11_5445 NZ_JJLL01000080.1 Protein Homology CDS 3378 3629 . + 0 ID=cds-WP_032254083.1;Parent=gene-AD11_RS02920;Dbxref=GenBank:WP_032254083.1;Name=WP_032254083.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=AD11_RS02920;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_032254083.1;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 3626 3913 . + . ID=gene-AD11_RS02925;Name=AD11_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02925;old_locus_tag=AD11_5446 NZ_JJLL01000080.1 Protein Homology CDS 3626 3913 . + 0 ID=cds-WP_000222766.1;Parent=gene-AD11_RS02925;Dbxref=GenBank:WP_000222766.1;Name=WP_000222766.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=AD11_RS02925;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_000222766.1;transl_table=11 NZ_JJLL01000080.1 RefSeq pseudogene 3999 4418 . + . ID=gene-AD11_RS02930;Name=AD11_RS02930;end_range=4418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02930;old_locus_tag=AD11_5447;partial=true;pseudo=true NZ_JJLL01000080.1 Protein Homology CDS 3999 4418 . + 0 ID=cds-AD11_RS02930;Parent=gene-AD11_RS02930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=AD11_RS02930;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000080.1 RefSeq gene 4461 4738 . - . ID=gene-AD11_RS02935;Name=AD11_RS02935;end_range=4738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02935;partial=true NZ_JJLL01000080.1 Protein Homology CDS 4461 4738 . - 2 ID=cds-WP_032235767.1-3;Parent=gene-AD11_RS02935;Dbxref=GenBank:WP_032235767.1;Name=WP_032235767.1;Ontology_term=GO:0015074;end_range=4738,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS02935;partial=true;product=integrase core domain-containing protein;protein_id=WP_032235767.1;transl_table=11 ##sequence-region NZ_JJLL01000081.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000081.1 RefSeq region 1 425 . + . ID=NZ_JJLL01000081.1:1..425;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 ##sequence-region NZ_JJLL01000082.1 1 3743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000082.1 RefSeq region 1 3743 . + . ID=NZ_JJLL01000082.1:1..3743;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000082.1 RefSeq pseudogene 1 1981 . + . ID=gene-AD11_RS32415;Name=AD11_RS32415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32415;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000082.1 Protein Homology CDS 1 1981 . + 0 ID=cds-AD11_RS32415;Parent=gene-AD11_RS32415;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309148.1;locus_tag=AD11_RS32415;partial=true;product=phage tail tip protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000082.1 RefSeq gene 2049 2648 . + . ID=gene-AD11_RS02945;Name=AD11_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02945;old_locus_tag=AD11_5452 NZ_JJLL01000082.1 Protein Homology CDS 2049 2648 . + 0 ID=cds-WP_032217644.1;Parent=gene-AD11_RS02945;Dbxref=GenBank:WP_032217644.1;Name=WP_032217644.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308870.1;locus_tag=AD11_RS02945;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032217644.1;transl_table=11 NZ_JJLL01000082.1 RefSeq gene 2800 3743 . + . ID=gene-AD11_RS02950;Name=AD11_RS02950;end_range=3743,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS02950;old_locus_tag=AD11_5453;partial=true NZ_JJLL01000082.1 Protein Homology CDS 2800 3743 . + 0 ID=cds-WP_033866263.1;Parent=gene-AD11_RS02950;Dbxref=GenBank:WP_033866263.1;Name=WP_033866263.1;end_range=3743,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218375.1;locus_tag=AD11_RS02950;partial=true;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_033866263.1;transl_table=11 ##sequence-region NZ_JJLL01000083.1 1 130751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000083.1 RefSeq region 1 130751 . + . ID=NZ_JJLL01000083.1:1..130751;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000083.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS02955;Name=AD11_RS02955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS02955;old_locus_tag=AD11_0001;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000083.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS02955;Parent=gene-AD11_RS02955;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS02955;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 890 1153 . - . ID=gene-AD11_RS02960;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AD11_RS02960;old_locus_tag=AD11_0002 NZ_JJLL01000083.1 Protein Homology CDS 890 1153 . - 0 ID=cds-WP_001274021.1;Parent=gene-AD11_RS02960;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AD11_RS02960;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 1256 1474 . + . ID=gene-AD11_RS02965;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AD11_RS02965 NZ_JJLL01000083.1 Protein Homology CDS 1256 1474 . + 0 ID=cds-WP_001300728.1;Parent=gene-AD11_RS02965;Dbxref=GenBank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AD11_RS02965;product=DUF2575 family protein;protein_id=WP_001300728.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 1482 2423 . + . ID=gene-AD11_RS02970;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AD11_RS02970;old_locus_tag=AD11_0004 NZ_JJLL01000083.1 Protein Homology CDS 1482 2423 . + 0 ID=cds-WP_000767329.1;Parent=gene-AD11_RS02970;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AD11_RS02970;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 2466 5282 . + . ID=gene-AD11_RS02975;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AD11_RS02975;old_locus_tag=AD11_0005 NZ_JJLL01000083.1 Protein Homology CDS 2466 5282 . + 0 ID=cds-WP_001286857.1;Parent=gene-AD11_RS02975;Dbxref=GenBank:WP_001286857.1;Name=WP_001286857.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AD11_RS02975;product=isoleucine--tRNA ligase;protein_id=WP_001286857.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 5282 5776 . + . ID=gene-AD11_RS02980;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AD11_RS02980;old_locus_tag=AD11_0006 NZ_JJLL01000083.1 Protein Homology CDS 5282 5776 . + 0 ID=cds-WP_000083372.1;Parent=gene-AD11_RS02980;Dbxref=GenBank:WP_000083372.1;Name=WP_000083372.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AD11_RS02980;product=signal peptidase II;protein_id=WP_000083372.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 5901 6350 . + . ID=gene-AD11_RS02985;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AD11_RS02985;old_locus_tag=AD11_0007 NZ_JJLL01000083.1 Protein Homology CDS 5901 6350 . + 0 ID=cds-WP_000004655.1;Parent=gene-AD11_RS02985;Dbxref=GenBank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AD11_RS02985;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 6352 7302 . + . ID=gene-AD11_RS02990;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AD11_RS02990;old_locus_tag=AD11_0008 NZ_JJLL01000083.1 Protein Homology CDS 6352 7302 . + 0 ID=cds-WP_001166395.1;Parent=gene-AD11_RS02990;Dbxref=GenBank:WP_001166395.1;Name=WP_001166395.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AD11_RS02990;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 7368 8282 . + . ID=gene-AD11_RS02995;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AD11_RS02995;old_locus_tag=AD11_0009 NZ_JJLL01000083.1 Protein Homology CDS 7368 8282 . + 0 ID=cds-WP_001239142.1;Parent=gene-AD11_RS02995;Dbxref=GenBank:WP_001239142.1;Name=WP_001239142.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414571.1;locus_tag=AD11_RS02995;product=ribonucleoside hydrolase RihC;protein_id=WP_001239142.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 8449 9270 . + . ID=gene-AD11_RS03000;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AD11_RS03000;old_locus_tag=AD11_0010 NZ_JJLL01000083.1 Protein Homology CDS 8449 9270 . + 0 ID=cds-WP_000543604.1;Parent=gene-AD11_RS03000;Dbxref=GenBank:WP_000543604.1;Name=WP_000543604.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AD11_RS03000;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543604.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 9726 10874 . + . ID=gene-AD11_RS03015;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AD11_RS03015;old_locus_tag=AD11_0013 NZ_JJLL01000083.1 Protein Homology CDS 9726 10874 . + 0 ID=cds-WP_000597260.1;Parent=gene-AD11_RS03015;Dbxref=GenBank:WP_000597260.1;Name=WP_000597260.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AD11_RS03015;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 10892 14113 . + . ID=gene-AD11_RS03020;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AD11_RS03020;old_locus_tag=AD11_0014 NZ_JJLL01000083.1 Protein Homology CDS 10892 14113 . + 0 ID=cds-WP_001126348.1;Parent=gene-AD11_RS03020;Dbxref=GenBank:WP_001126348.1;Name=WP_001126348.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414574.1;locus_tag=AD11_RS03020;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126348.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 14375 14770 . + . ID=gene-AD11_RS03030;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AD11_RS03030;old_locus_tag=AD11_0015 NZ_JJLL01000083.1 Protein Homology CDS 14375 14770 . + 0 ID=cds-WP_000333125.1;Parent=gene-AD11_RS03030;Dbxref=GenBank:WP_000333125.1;Name=WP_000333125.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AD11_RS03030;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333125.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 14856 15446 . - . ID=gene-AD11_RS03035;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AD11_RS03035;old_locus_tag=AD11_0016 NZ_JJLL01000083.1 Protein Homology CDS 14856 15446 . - 0 ID=cds-WP_000122871.1;Parent=gene-AD11_RS03035;Dbxref=GenBank:WP_000122871.1;Name=WP_000122871.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414577.2;locus_tag=AD11_RS03035;product=carnitine operon protein CaiE;protein_id=WP_000122871.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 15452 16237 . - . ID=gene-AD11_RS03040;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AD11_RS03040;old_locus_tag=AD11_0017 NZ_JJLL01000083.1 Protein Homology CDS 15452 16237 . - 0 ID=cds-WP_001295419.1;Parent=gene-AD11_RS03040;Dbxref=GenBank:WP_001295419.1;Name=WP_001295419.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AD11_RS03040;product=crotonobetainyl-CoA hydratase;protein_id=WP_001295419.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 16346 17899 . - . ID=gene-AD11_RS03045;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AD11_RS03045;old_locus_tag=AD11_0018 NZ_JJLL01000083.1 Protein Homology CDS 16346 17899 . - 0 ID=cds-WP_001338228.1;Parent=gene-AD11_RS03045;Dbxref=GenBank:WP_001338228.1;Name=WP_001338228.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414579.4;locus_tag=AD11_RS03045;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_001338228.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 17973 19190 . - . ID=gene-AD11_RS03050;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AD11_RS03050;old_locus_tag=AD11_0019 NZ_JJLL01000083.1 Protein Homology CDS 17973 19190 . - 0 ID=cds-WP_000349936.1;Parent=gene-AD11_RS03050;Dbxref=GenBank:WP_000349936.1;Name=WP_000349936.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414580.1;locus_tag=AD11_RS03050;product=L-carnitine CoA-transferase;protein_id=WP_000349936.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 19319 20461 . - . ID=gene-AD11_RS03055;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AD11_RS03055;old_locus_tag=AD11_0020 NZ_JJLL01000083.1 Protein Homology CDS 19319 20461 . - 0 ID=cds-WP_000347117.1;Parent=gene-AD11_RS03055;Dbxref=GenBank:WP_000347117.1;Name=WP_000347117.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AD11_RS03055;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 20492 22006 . - . ID=gene-AD11_RS03060;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=AD11_RS03060;old_locus_tag=AD11_0021 NZ_JJLL01000083.1 Protein Homology CDS 20492 22006 . - 0 ID=cds-WP_000787103.1;Parent=gene-AD11_RS03060;Dbxref=GenBank:WP_000787103.1;Name=WP_000787103.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414582.1;locus_tag=AD11_RS03060;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_000787103.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 22479 23249 . + . ID=gene-AD11_RS03065;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AD11_RS03065;old_locus_tag=AD11_0022 NZ_JJLL01000083.1 Protein Homology CDS 22479 23249 . + 0 ID=cds-WP_000692204.1;Parent=gene-AD11_RS03065;Dbxref=GenBank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AD11_RS03065;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 23264 24205 . + . ID=gene-AD11_RS03070;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AD11_RS03070;old_locus_tag=AD11_0023 NZ_JJLL01000083.1 Protein Homology CDS 23264 24205 . + 0 ID=cds-WP_001091499.1;Parent=gene-AD11_RS03070;Dbxref=GenBank:WP_001091499.1;Name=WP_001091499.1;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414584.1;locus_tag=AD11_RS03070;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_001091499.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 24256 25542 . + . ID=gene-AD11_RS03075;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=AD11_RS03075;old_locus_tag=AD11_0024 NZ_JJLL01000083.1 Protein Homology CDS 24256 25542 . + 0 ID=cds-WP_001287715.1;Parent=gene-AD11_RS03075;Dbxref=GenBank:WP_001287715.1;Name=WP_001287715.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414585.1;locus_tag=AD11_RS03075;product=FAD-dependent oxidoreductase;protein_id=WP_001287715.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 25539 25826 . + . ID=gene-AD11_RS03080;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AD11_RS03080;old_locus_tag=AD11_0025 NZ_JJLL01000083.1 Protein Homology CDS 25539 25826 . + 0 ID=cds-WP_000203741.1;Parent=gene-AD11_RS03080;Dbxref=GenBank:WP_000203741.1;Name=WP_000203741.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308074.1;locus_tag=AD11_RS03080;product=ferredoxin-like protein FixX;protein_id=WP_000203741.1;transl_table=11 NZ_JJLL01000083.1 RefSeq pseudogene 25884 27215 . + . ID=gene-AD11_RS03085;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=pseudogene;locus_tag=AD11_RS03085;old_locus_tag=AD11_0026;pseudo=true NZ_JJLL01000083.1 Protein Homology CDS 25884 27215 . + 0 ID=cds-AD11_RS03085;Parent=gene-AD11_RS03085;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AD11_RS03085;product=MFS transporter;pseudo=true;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 27323 27853 . + . ID=gene-AD11_RS03090;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AD11_RS03090;old_locus_tag=AD11_0028 NZ_JJLL01000083.1 Protein Homology CDS 27323 27853 . + 0 ID=cds-WP_000600735.1;Parent=gene-AD11_RS03090;Dbxref=GenBank:WP_000600735.1;Name=WP_000600735.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706002.1;locus_tag=AD11_RS03090;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600735.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 27846 29708 . + . ID=gene-AD11_RS03095;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AD11_RS03095;old_locus_tag=AD11_0029 NZ_JJLL01000083.1 Protein Homology CDS 27846 29708 . + 0 ID=cds-WP_000377129.1;Parent=gene-AD11_RS03095;Dbxref=GenBank:WP_000377129.1;Name=WP_000377129.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AD11_RS03095;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377129.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 29900 30379 . + . ID=gene-AD11_RS03100;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AD11_RS03100;old_locus_tag=AD11_0030 NZ_JJLL01000083.1 Protein Homology CDS 29900 30379 . + 0 ID=cds-WP_000624375.1;Parent=gene-AD11_RS03100;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AD11_RS03100;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 30457 31299 . - . ID=gene-AD11_RS03105;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AD11_RS03105;old_locus_tag=AD11_0031 NZ_JJLL01000083.1 Protein Homology CDS 30457 31299 . - 0 ID=cds-WP_000257168.1;Parent=gene-AD11_RS03105;Dbxref=GenBank:WP_000257168.1;Name=WP_000257168.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AD11_RS03105;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257168.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 31306 31683 . - . ID=gene-AD11_RS03110;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AD11_RS03110;old_locus_tag=AD11_0032 NZ_JJLL01000083.1 Protein Homology CDS 31306 31683 . - 0 ID=cds-WP_000610901.1;Parent=gene-AD11_RS03110;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AD11_RS03110;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 31686 32507 . - . ID=gene-AD11_RS03115;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AD11_RS03115;old_locus_tag=AD11_0033 NZ_JJLL01000083.1 Protein Homology CDS 31686 32507 . - 0 ID=cds-WP_001065381.1;Parent=gene-AD11_RS03115;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AD11_RS03115;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 32504 33493 . - . ID=gene-AD11_RS03120;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AD11_RS03120;old_locus_tag=AD11_0034 NZ_JJLL01000083.1 Protein Homology CDS 32504 33493 . - 0 ID=cds-WP_000241259.1;Parent=gene-AD11_RS03120;Dbxref=GenBank:WP_000241259.1;Name=WP_000241259.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308084.1;locus_tag=AD11_RS03120;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000241259.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 33493 34779 . - . ID=gene-AD11_RS03125;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AD11_RS03125;old_locus_tag=AD11_0035 NZ_JJLL01000083.1 Protein Homology CDS 33493 34779 . - 0 ID=cds-WP_000800457.1;Parent=gene-AD11_RS03125;Dbxref=GenBank:WP_000800457.1;Name=WP_000800457.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AD11_RS03125;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 34832 37186 . - . ID=gene-AD11_RS03130;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AD11_RS03130;old_locus_tag=AD11_0036 NZ_JJLL01000083.1 Protein Homology CDS 34832 37186 . - 0 ID=cds-WP_000746151.1;Parent=gene-AD11_RS03130;Dbxref=GenBank:WP_000746151.1;Name=WP_000746151.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AD11_RS03130;product=LPS assembly protein LptD;protein_id=WP_000746151.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 37441 38256 . + . ID=gene-AD11_RS03135;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AD11_RS03135;old_locus_tag=AD11_0037 NZ_JJLL01000083.1 Protein Homology CDS 37441 38256 . + 0 ID=cds-WP_001200579.1;Parent=gene-AD11_RS03135;Dbxref=GenBank:WP_001200579.1;Name=WP_001200579.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414597.1;locus_tag=AD11_RS03135;product=co-chaperone DjlA;protein_id=WP_001200579.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 38373 39032 . - . ID=gene-AD11_RS03140;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AD11_RS03140;old_locus_tag=AD11_0038 NZ_JJLL01000083.1 Protein Homology CDS 38373 39032 . - 0 ID=cds-WP_000525176.1;Parent=gene-AD11_RS03140;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AD11_RS03140;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 39044 41950 . - . ID=gene-AD11_RS03145;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AD11_RS03145;old_locus_tag=AD11_0039 NZ_JJLL01000083.1 Protein Homology CDS 39044 41950 . - 0 ID=cds-WP_001117011.1;Parent=gene-AD11_RS03145;Dbxref=GenBank:WP_001117011.1;Name=WP_001117011.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AD11_RS03145;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 42115 44466 . - . ID=gene-AD11_RS03150;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AD11_RS03150;old_locus_tag=AD11_0040 NZ_JJLL01000083.1 Protein Homology CDS 42115 44466 . - 0 ID=cds-WP_033866270.1;Parent=gene-AD11_RS03150;Dbxref=GenBank:WP_033866270.1;Name=WP_033866270.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308091.1;locus_tag=AD11_RS03150;product=DNA polymerase II;protein_id=WP_033866270.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 44541 45236 . - . ID=gene-AD11_RS03155;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AD11_RS03155;old_locus_tag=AD11_0041 NZ_JJLL01000083.1 Protein Homology CDS 44541 45236 . - 0 ID=cds-WP_000888665.1;Parent=gene-AD11_RS03155;Dbxref=GenBank:WP_000888665.1;Name=WP_000888665.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=AD11_RS03155;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888665.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 45436 46938 . - . ID=gene-AD11_RS03160;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AD11_RS03160;old_locus_tag=AD11_0042 NZ_JJLL01000083.1 Protein Homology CDS 45436 46938 . - 0 ID=cds-WP_000151741.1;Parent=gene-AD11_RS03160;Dbxref=GenBank:WP_000151741.1;Name=WP_000151741.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AD11_RS03160;product=L-arabinose isomerase;protein_id=WP_000151741.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 46949 48649 . - . ID=gene-AD11_RS03165;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AD11_RS03165;old_locus_tag=AD11_0043 NZ_JJLL01000083.1 Protein Homology CDS 46949 48649 . - 0 ID=cds-WP_000951779.1;Parent=gene-AD11_RS03165;Dbxref=GenBank:WP_000951779.1;Name=WP_000951779.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706016.1;locus_tag=AD11_RS03165;product=ribulokinase;protein_id=WP_000951779.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 48989 49867 . + . ID=gene-AD11_RS03170;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AD11_RS03170;old_locus_tag=AD11_0044 NZ_JJLL01000083.1 Protein Homology CDS 48989 49867 . + 0 ID=cds-WP_001300811.1;Parent=gene-AD11_RS03170;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AD11_RS03170;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 49953 50717 . + . ID=gene-AD11_RS03175;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=AD11_RS03175;old_locus_tag=AD11_0045 NZ_JJLL01000083.1 Protein Homology CDS 49953 50717 . + 0 ID=cds-WP_033866272.1;Parent=gene-AD11_RS03175;Dbxref=GenBank:WP_033866272.1;Name=WP_033866272.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001148402.1;locus_tag=AD11_RS03175;product=DedA family protein;protein_id=WP_033866272.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 50831 51529 . - . ID=gene-AD11_RS03180;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AD11_RS03180;old_locus_tag=AD11_0046 NZ_JJLL01000083.1 Protein Homology CDS 50831 51529 . - 0 ID=cds-WP_000916291.1;Parent=gene-AD11_RS03180;Dbxref=GenBank:WP_000916291.1;Name=WP_000916291.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308097.1;locus_tag=AD11_RS03180;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916291.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 51513 53123 . - . ID=gene-AD11_RS03185;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AD11_RS03185;old_locus_tag=AD11_0047 NZ_JJLL01000083.1 Protein Homology CDS 51513 53123 . - 0 ID=cds-WP_000235722.1;Parent=gene-AD11_RS03185;Dbxref=GenBank:WP_000235722.1;Name=WP_000235722.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706020.1;locus_tag=AD11_RS03185;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235722.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 53099 54082 . - . ID=gene-AD11_RS03190;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AD11_RS03190;old_locus_tag=AD11_0048 NZ_JJLL01000083.1 Protein Homology CDS 53099 54082 . - 0 ID=cds-WP_033866274.1;Parent=gene-AD11_RS03190;Dbxref=GenBank:WP_033866274.1;Name=WP_033866274.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=AD11_RS03190;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_033866274.1;transl_table=11 NZ_JJLL01000083.1 cmsearch riboswitch 54113 54212 . - . ID=id-NZ_JJLL01000083.1:54113..54212;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLL01000083.1 RefSeq gene 54246 55901 . - . ID=gene-AD11_RS03195;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AD11_RS03195;old_locus_tag=AD11_0049 NZ_JJLL01000083.1 Protein Homology CDS 54246 55901 . - 0 ID=cds-WP_001295535.1;Parent=gene-AD11_RS03195;Dbxref=GenBank:WP_001295535.1;Name=WP_001295535.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706022.2;locus_tag=AD11_RS03195;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001295535.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 55990 56121 . + . ID=gene-AD11_RS03200;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AD11_RS03200;old_locus_tag=AD11_0050 NZ_JJLL01000083.1 Protein Homology CDS 55990 56121 . + 0 ID=cds-WP_001248770.1;Parent=gene-AD11_RS03200;Dbxref=GenBank:WP_001248770.1;Name=WP_001248770.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AD11_RS03200;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 56223 57401 . + . ID=gene-AD11_RS03205;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AD11_RS03205;old_locus_tag=AD11_0051 NZ_JJLL01000083.1 Protein Homology CDS 56223 57401 . + 0 ID=cds-WP_000637849.1;Parent=gene-AD11_RS03205;Dbxref=GenBank:WP_000637849.1;Name=WP_000637849.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AD11_RS03205;product=sugar efflux transporter SetA;protein_id=WP_000637849.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 57450 58055 . - . ID=gene-AD11_RS03210;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AD11_RS03210;old_locus_tag=AD11_0052 NZ_JJLL01000083.1 Protein Homology CDS 57450 58055 . - 0 ID=cds-WP_000818228.1;Parent=gene-AD11_RS03210;Dbxref=GenBank:WP_000818228.1;Name=WP_000818228.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AD11_RS03210;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 58066 59466 . - . ID=gene-AD11_RS03215;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AD11_RS03215;old_locus_tag=AD11_0053 NZ_JJLL01000083.1 Protein Homology CDS 58066 59466 . - 0 ID=cds-WP_001140652.1;Parent=gene-AD11_RS03215;Dbxref=GenBank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AD11_RS03215;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 59469 60560 . - . ID=gene-AD11_RS03220;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AD11_RS03220;old_locus_tag=AD11_0054 NZ_JJLL01000083.1 Protein Homology CDS 59469 60560 . - 0 ID=cds-WP_000042353.1;Parent=gene-AD11_RS03220;Dbxref=GenBank:WP_000042353.1;Name=WP_000042353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AD11_RS03220;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 60560 62131 . - . ID=gene-AD11_RS03225;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AD11_RS03225;old_locus_tag=AD11_0055 NZ_JJLL01000083.1 Protein Homology CDS 60560 62131 . - 0 ID=cds-WP_000082850.1;Parent=gene-AD11_RS03225;Dbxref=GenBank:WP_000082850.1;Name=WP_000082850.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AD11_RS03225;product=2-isopropylmalate synthase;protein_id=WP_000082850.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 62224 62310 . - . ID=gene-AD11_RS03230;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AD11_RS03230 NZ_JJLL01000083.1 Protein Homology CDS 62224 62310 . - 0 ID=cds-WP_001300467.1;Parent=gene-AD11_RS03230;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AD11_RS03230;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 62970 63914 . + . ID=gene-AD11_RS03235;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AD11_RS03235;old_locus_tag=AD11_0057 NZ_JJLL01000083.1 Protein Homology CDS 62970 63914 . + 0 ID=cds-WP_001297362.1;Parent=gene-AD11_RS03235;Dbxref=GenBank:WP_001297362.1;Name=WP_001297362.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AD11_RS03235;product=transcriptional regulator LeuO;protein_id=WP_001297362.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 64069 64113 . - . ID=gene-AD11_RS31355;Name=AD11_RS31355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31355 NZ_JJLL01000083.1 Protein Homology CDS 64069 64113 . - 0 ID=cds-WP_120795371.1;Parent=gene-AD11_RS31355;Dbxref=GenBank:WP_120795371.1;Name=WP_120795371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AD11_RS31355;product=protein YabR;protein_id=WP_120795371.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 64232 65956 . + . ID=gene-AD11_RS03240;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AD11_RS03240;old_locus_tag=AD11_0058 NZ_JJLL01000083.1 Protein Homology CDS 64232 65956 . + 0 ID=cds-WP_000425634.1;Parent=gene-AD11_RS03240;Dbxref=GenBank:WP_000425634.1;Name=WP_000425634.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AD11_RS03240;product=acetolactate synthase 3 large subunit;protein_id=WP_000425634.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 65959 66450 . + . ID=gene-AD11_RS03245;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD11_RS03245;old_locus_tag=AD11_0059 NZ_JJLL01000083.1 Protein Homology CDS 65959 66450 . + 0 ID=cds-WP_001300383.1;Parent=gene-AD11_RS03245;Dbxref=GenBank:WP_001300383.1;Name=WP_001300383.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AD11_RS03245;product=acetolactate synthase small subunit;protein_id=WP_001300383.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 66462 66548 . + . ID=gene-AD11_RS03250;Name=AD11_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS03250 NZ_JJLL01000083.1 Protein Homology CDS 66462 66548 . + 0 ID=cds-WP_001303787.1;Parent=gene-AD11_RS03250;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AD11_RS03250;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 66630 67634 . + . ID=gene-AD11_RS03255;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AD11_RS03255;old_locus_tag=AD11_0060 NZ_JJLL01000083.1 Protein Homology CDS 66630 67634 . + 0 ID=cds-WP_000762401.1;Parent=gene-AD11_RS03255;Dbxref=GenBank:WP_000762401.1;Name=WP_000762401.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AD11_RS03255;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 68236 68694 . + . ID=gene-AD11_RS03260;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AD11_RS03260;old_locus_tag=AD11_0062 NZ_JJLL01000083.1 Protein Homology CDS 68236 68694 . + 0 ID=cds-WP_001295770.1;Parent=gene-AD11_RS03260;Dbxref=GenBank:WP_001295770.1;Name=WP_001295770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AD11_RS03260;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295770.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 68696 69637 . + . ID=gene-AD11_RS03265;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AD11_RS03265;old_locus_tag=AD11_0063 NZ_JJLL01000083.1 Protein Homology CDS 68696 69637 . + 0 ID=cds-WP_000970479.1;Parent=gene-AD11_RS03265;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AD11_RS03265;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 69634 69999 . + . ID=gene-AD11_RS03270;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AD11_RS03270;old_locus_tag=AD11_0064 NZ_JJLL01000083.1 Protein Homology CDS 69634 69999 . + 0 ID=cds-WP_000625658.1;Parent=gene-AD11_RS03270;Dbxref=GenBank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AD11_RS03270;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 70015 71781 . + . ID=gene-AD11_RS03275;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AD11_RS03275;old_locus_tag=AD11_0065 NZ_JJLL01000083.1 Protein Homology CDS 70015 71781 . + 0 ID=cds-WP_000642196.1;Parent=gene-AD11_RS03275;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AD11_RS03275;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 71768 73255 . + . ID=gene-AD11_RS03280;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AD11_RS03280;old_locus_tag=AD11_0066 NZ_JJLL01000083.1 Protein Homology CDS 71768 73255 . + 0 ID=cds-WP_000775109.1;Parent=gene-AD11_RS03280;Dbxref=GenBank:WP_000775109.1;Name=WP_000775109.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414627.1;locus_tag=AD11_RS03280;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_000775109.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 73252 74610 . + . ID=gene-AD11_RS03285;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AD11_RS03285;old_locus_tag=AD11_0067 NZ_JJLL01000083.1 Protein Homology CDS 73252 74610 . + 0 ID=cds-WP_000626688.1;Parent=gene-AD11_RS03285;Dbxref=GenBank:WP_000626688.1;Name=WP_000626688.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AD11_RS03285;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626688.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 74604 75686 . + . ID=gene-AD11_RS03290;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AD11_RS03290;old_locus_tag=AD11_0068 NZ_JJLL01000083.1 Protein Homology CDS 74604 75686 . + 0 ID=cds-WP_000964131.1;Parent=gene-AD11_RS03290;Dbxref=GenBank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AD11_RS03290;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 75689 77005 . + . ID=gene-AD11_RS03295;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AD11_RS03295;old_locus_tag=AD11_0069 NZ_JJLL01000083.1 Protein Homology CDS 75689 77005 . + 0 ID=cds-WP_000796481.1;Parent=gene-AD11_RS03295;Dbxref=GenBank:WP_000796481.1;Name=WP_000796481.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AD11_RS03295;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796481.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 77005 78249 . + . ID=gene-AD11_RS03300;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AD11_RS03300;old_locus_tag=AD11_0070 NZ_JJLL01000083.1 Protein Homology CDS 77005 78249 . + 0 ID=cds-WP_001295532.1;Parent=gene-AD11_RS03300;Dbxref=GenBank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AD11_RS03300;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 78246 79313 . + . ID=gene-AD11_RS03305;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AD11_RS03305;old_locus_tag=AD11_0071 NZ_JJLL01000083.1 Protein Homology CDS 78246 79313 . + 0 ID=cds-WP_000016560.1;Parent=gene-AD11_RS03305;Dbxref=GenBank:WP_000016560.1;Name=WP_000016560.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414632.1;locus_tag=AD11_RS03305;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016560.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 79367 80842 . + . ID=gene-AD11_RS03310;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AD11_RS03310;old_locus_tag=AD11_0072 NZ_JJLL01000083.1 Protein Homology CDS 79367 80842 . + 0 ID=cds-WP_001096050.1;Parent=gene-AD11_RS03310;Dbxref=GenBank:WP_001096050.1;Name=WP_001096050.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414633.1;locus_tag=AD11_RS03310;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096050.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 80835 81755 . + . ID=gene-AD11_RS03315;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AD11_RS03315;old_locus_tag=AD11_0073 NZ_JJLL01000083.1 Protein Homology CDS 80835 81755 . + 0 ID=cds-WP_000130056.1;Parent=gene-AD11_RS03315;Dbxref=GenBank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AD11_RS03315;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 81757 82587 . + . ID=gene-AD11_RS03320;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AD11_RS03320;old_locus_tag=AD11_0074 NZ_JJLL01000083.1 Protein Homology CDS 81757 82587 . + 0 ID=cds-WP_000075744.1;Parent=gene-AD11_RS03320;Dbxref=GenBank:WP_000075744.1;Name=WP_000075744.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308124.1;locus_tag=AD11_RS03320;product=cell division protein FtsQ;protein_id=WP_000075744.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 82584 83846 . + . ID=gene-AD11_RS03325;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AD11_RS03325;old_locus_tag=AD11_0075 NZ_JJLL01000083.1 Protein Homology CDS 82584 83846 . + 0 ID=cds-WP_000588474.1;Parent=gene-AD11_RS03325;Dbxref=GenBank:WP_000588474.1;Name=WP_000588474.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AD11_RS03325;product=cell division protein FtsA;protein_id=WP_000588474.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 83907 85058 . + . ID=gene-AD11_RS03330;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AD11_RS03330;old_locus_tag=AD11_0076 NZ_JJLL01000083.1 Protein Homology CDS 83907 85058 . + 0 ID=cds-WP_000462776.1;Parent=gene-AD11_RS03330;Dbxref=GenBank:WP_000462776.1;Name=WP_000462776.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AD11_RS03330;product=cell division protein FtsZ;protein_id=WP_000462776.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 85159 86076 . + . ID=gene-AD11_RS03335;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AD11_RS03335;old_locus_tag=AD11_0077 NZ_JJLL01000083.1 Protein Homology CDS 85159 86076 . + 0 ID=cds-WP_000595482.1;Parent=gene-AD11_RS03335;Dbxref=GenBank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AD11_RS03335;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 86307 86819 . + . ID=gene-AD11_RS03340;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AD11_RS03340;old_locus_tag=AD11_0078 NZ_JJLL01000083.1 Protein Homology CDS 86307 86819 . + 0 ID=cds-WP_000014321.1;Parent=gene-AD11_RS03340;Dbxref=GenBank:WP_000014321.1;Name=WP_000014321.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414639.2;locus_tag=AD11_RS03340;product=secA translation cis-regulator SecM;protein_id=WP_000014321.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 86881 89586 . + . ID=gene-AD11_RS03345;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AD11_RS03345;old_locus_tag=AD11_0079 NZ_JJLL01000083.1 Protein Homology CDS 86881 89586 . + 0 ID=cds-WP_000905780.1;Parent=gene-AD11_RS03345;Dbxref=GenBank:WP_000905780.1;Name=WP_000905780.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AD11_RS03345;product=preprotein translocase subunit SecA;protein_id=WP_000905780.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 89646 90035 . + . ID=gene-AD11_RS03350;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AD11_RS03350;old_locus_tag=AD11_0080 NZ_JJLL01000083.1 Protein Homology CDS 89646 90035 . + 0 ID=cds-WP_000736009.1;Parent=gene-AD11_RS03350;Dbxref=GenBank:WP_000736009.1;Name=WP_000736009.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AD11_RS03350;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736009.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 90251 90448 . - . ID=gene-AD11_RS03360;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AD11_RS03360;old_locus_tag=AD11_0081 NZ_JJLL01000083.1 Protein Homology CDS 90251 90448 . - 0 ID=cds-WP_000005042.1;Parent=gene-AD11_RS03360;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AD11_RS03360;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 90458 91201 . - . ID=gene-AD11_RS03365;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AD11_RS03365;old_locus_tag=AD11_0082 NZ_JJLL01000083.1 Protein Homology CDS 90458 91201 . - 0 ID=cds-WP_001381398.1;Parent=gene-AD11_RS03365;Dbxref=GenBank:WP_001381398.1;Name=WP_001381398.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AD11_RS03365;product=cell division protein ZapD;protein_id=WP_001381398.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 91201 91821 . - . ID=gene-AD11_RS03370;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AD11_RS03370;old_locus_tag=AD11_0083 NZ_JJLL01000083.1 Protein Homology CDS 91201 91821 . - 0 ID=cds-WP_001269520.1;Parent=gene-AD11_RS03370;Dbxref=GenBank:WP_001269520.1;Name=WP_001269520.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AD11_RS03370;product=dephospho-CoA kinase;protein_id=WP_001269520.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 91846 91890 . + . ID=gene-AD11_RS31995;Name=AD11_RS31995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31995 NZ_JJLL01000083.1 Protein Homology CDS 91846 91890 . + 0 ID=cds-WP_120795372.1;Parent=gene-AD11_RS31995;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AD11_RS31995;product=protein YacM;protein_id=WP_120795372.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 92046 93089 . + . ID=gene-AD11_RS03375;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AD11_RS03375;old_locus_tag=AD11_0084 NZ_JJLL01000083.1 Protein Homology CDS 92046 93089 . + 0 ID=cds-WP_001217338.1;Parent=gene-AD11_RS03375;Dbxref=GenBank:WP_001217338.1;Name=WP_001217338.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AD11_RS03375;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 93124 94326 . - . ID=gene-AD11_RS03380;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AD11_RS03380;old_locus_tag=AD11_0085 NZ_JJLL01000083.1 Protein Homology CDS 93124 94326 . - 0 ID=cds-WP_000157278.1;Parent=gene-AD11_RS03380;Dbxref=GenBank:WP_000157278.1;Name=WP_000157278.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414648.1;locus_tag=AD11_RS03380;product=protein transport protein HofC;protein_id=WP_000157278.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 94316 95701 . - . ID=gene-AD11_RS03385;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD11_RS03385;old_locus_tag=AD11_0086 NZ_JJLL01000083.1 Protein Homology CDS 94316 95701 . - 0 ID=cds-WP_001025188.1;Parent=gene-AD11_RS03385;Dbxref=GenBank:WP_001025188.1;Name=WP_001025188.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308138.1;locus_tag=AD11_RS03385;product=type II secretion system protein GspE;protein_id=WP_001025188.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 95711 96151 . - . ID=gene-AD11_RS03390;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AD11_RS03390;old_locus_tag=AD11_0087 NZ_JJLL01000083.1 Protein Homology CDS 95711 96151 . - 0 ID=cds-WP_000360901.1;Parent=gene-AD11_RS03390;Dbxref=GenBank:WP_000360901.1;Name=WP_000360901.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AD11_RS03390;product=prepilin peptidase-dependent pilin;protein_id=WP_000360901.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 96354 97247 . - . ID=gene-AD11_RS03400;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AD11_RS03400;old_locus_tag=AD11_0088 NZ_JJLL01000083.1 Protein Homology CDS 96354 97247 . - 0 ID=cds-WP_001135176.1;Parent=gene-AD11_RS03400;Dbxref=GenBank:WP_001135176.1;Name=WP_001135176.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=AD11_RS03400;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135176.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 97335 97886 . + . ID=gene-AD11_RS03405;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AD11_RS03405;old_locus_tag=AD11_0089 NZ_JJLL01000083.1 Protein Homology CDS 97335 97886 . + 0 ID=cds-WP_000923721.1;Parent=gene-AD11_RS03405;Dbxref=GenBank:WP_000923721.1;Name=WP_000923721.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=AD11_RS03405;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 97883 98737 . + . ID=gene-AD11_RS03410;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AD11_RS03410;old_locus_tag=AD11_0090 NZ_JJLL01000083.1 Protein Homology CDS 97883 98737 . + 0 ID=cds-WP_001688420.1;Parent=gene-AD11_RS03410;Dbxref=GenBank:WP_001688420.1;Name=WP_001688420.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AD11_RS03410;product=beta-lactamase regulator AmpE;protein_id=WP_001688420.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 98779 100152 . - . ID=gene-AD11_RS03415;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AD11_RS03415;old_locus_tag=AD11_0091 NZ_JJLL01000083.1 Protein Homology CDS 98779 100152 . - 0 ID=cds-WP_000969912.1;Parent=gene-AD11_RS03415;Dbxref=GenBank:WP_000969912.1;Name=WP_000969912.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706066.1;locus_tag=AD11_RS03415;product=aromatic amino acid transporter AroP;protein_id=WP_000969912.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 100693 101457 . + . ID=gene-AD11_RS03420;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AD11_RS03420;old_locus_tag=AD11_0092 NZ_JJLL01000083.1 Protein Homology CDS 100693 101457 . + 0 ID=cds-WP_000331776.1;Parent=gene-AD11_RS03420;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AD11_RS03420;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 101618 104281 . + . ID=gene-AD11_RS03425;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AD11_RS03425;old_locus_tag=AD11_0093 NZ_JJLL01000083.1 Protein Homology CDS 101618 104281 . + 0 ID=cds-WP_000003820.1;Parent=gene-AD11_RS03425;Dbxref=GenBank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AD11_RS03425;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 104296 106188 . + . ID=gene-AD11_RS03430;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AD11_RS03430;old_locus_tag=AD11_0094 NZ_JJLL01000083.1 Protein Homology CDS 104296 106188 . + 0 ID=cds-WP_000963518.1;Parent=gene-AD11_RS03430;Dbxref=GenBank:WP_000963518.1;Name=WP_000963518.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AD11_RS03430;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963518.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 106513 107937 . + . ID=gene-AD11_RS03435;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AD11_RS03435;old_locus_tag=AD11_0095 NZ_JJLL01000083.1 Protein Homology CDS 106513 107937 . + 0 ID=cds-WP_000102485.1;Parent=gene-AD11_RS03435;Dbxref=GenBank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AD11_RS03435;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 108008 109861 . - . ID=gene-AD11_RS03440;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;locus_tag=AD11_RS03440;old_locus_tag=AD11_0096 NZ_JJLL01000083.1 Protein Homology CDS 108008 109861 . - 0 ID=cds-WP_000784475.1;Parent=gene-AD11_RS03440;Dbxref=GenBank:WP_000784475.1;Name=WP_000784475.1;gbkey=CDS;gene=yacH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308148.1;locus_tag=AD11_RS03440;product=DUF3300 domain-containing protein;protein_id=WP_000784475.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 110216 112813 . + . ID=gene-AD11_RS03445;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AD11_RS03445;old_locus_tag=AD11_0097 NZ_JJLL01000083.1 Protein Homology CDS 110216 112813 . + 0 ID=cds-WP_033866275.1;Parent=gene-AD11_RS03445;Dbxref=GenBank:WP_033866275.1;Name=WP_033866275.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AD11_RS03445;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_033866275.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 112988 113350 . + . ID=gene-AD11_RS03450;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AD11_RS03450;old_locus_tag=AD11_0098 NZ_JJLL01000083.1 Protein Homology CDS 112988 113350 . + 0 ID=cds-WP_000384306.1;Parent=gene-AD11_RS03450;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AD11_RS03450;product=protein YacL;protein_id=WP_000384306.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 113388 114182 . - . ID=gene-AD11_RS03455;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AD11_RS03455;old_locus_tag=AD11_0099 NZ_JJLL01000083.1 Protein Homology CDS 113388 114182 . - 0 ID=cds-WP_000734287.1;Parent=gene-AD11_RS03455;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AD11_RS03455;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 114198 115064 . - . ID=gene-AD11_RS03460;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AD11_RS03460;old_locus_tag=AD11_0100 NZ_JJLL01000083.1 Protein Homology CDS 114198 115064 . - 0 ID=cds-WP_000818415.1;Parent=gene-AD11_RS03460;Dbxref=GenBank:WP_000818415.1;Name=WP_000818415.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AD11_RS03460;product=polyamine aminopropyltransferase;protein_id=WP_000818415.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 115170 115517 . - . ID=gene-AD11_RS03465;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AD11_RS03465;old_locus_tag=AD11_0101 NZ_JJLL01000083.1 Protein Homology CDS 115170 115517 . - 0 ID=cds-WP_001295568.1;Parent=gene-AD11_RS03465;Dbxref=GenBank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AD11_RS03465;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 115683 117233 . + . ID=gene-AD11_RS03470;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AD11_RS03470;old_locus_tag=AD11_0102 NZ_JJLL01000083.1 Protein Homology CDS 115683 117233 . + 0 ID=cds-WP_001189644.1;Parent=gene-AD11_RS03470;Dbxref=GenBank:WP_001189644.1;Name=WP_001189644.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AD11_RS03470;product=multicopper oxidase CueO;protein_id=WP_001189644.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 117435 119825 . - . ID=gene-AD11_RS03475;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AD11_RS03475;old_locus_tag=AD11_0103 NZ_JJLL01000083.1 Protein Homology CDS 117435 119825 . - 0 ID=cds-WP_001297052.1;Parent=gene-AD11_RS03475;Dbxref=GenBank:WP_001297052.1;Name=WP_001297052.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308155.1;locus_tag=AD11_RS03475;product=quinoprotein glucose dehydrogenase;protein_id=WP_001297052.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 120031 120567 . + . ID=gene-AD11_RS03480;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AD11_RS03480;old_locus_tag=AD11_0104 NZ_JJLL01000083.1 Protein Homology CDS 120031 120567 . + 0 ID=cds-WP_000683335.1;Parent=gene-AD11_RS03480;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AD11_RS03480;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 120608 121270 . - . ID=gene-AD11_RS03485;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AD11_RS03485;old_locus_tag=AD11_0105 NZ_JJLL01000083.1 Protein Homology CDS 120608 121270 . - 0 ID=cds-WP_000651599.1;Parent=gene-AD11_RS03485;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AD11_RS03485;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 121379 122305 . + . ID=gene-AD11_RS03490;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AD11_RS03490;old_locus_tag=AD11_0106 NZ_JJLL01000083.1 Protein Homology CDS 121379 122305 . + 0 ID=cds-WP_000150637.1;Parent=gene-AD11_RS03490;Dbxref=GenBank:WP_000150637.1;Name=WP_000150637.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AD11_RS03490;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 122302 123072 . + . ID=gene-AD11_RS03495;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AD11_RS03495;old_locus_tag=AD11_0107 NZ_JJLL01000083.1 Protein Homology CDS 122302 123072 . + 0 ID=cds-WP_000972203.1;Parent=gene-AD11_RS03495;Dbxref=GenBank:WP_000972203.1;Name=WP_000972203.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AD11_RS03495;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 123177 123617 . + . ID=gene-AD11_RS03500;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AD11_RS03500;old_locus_tag=AD11_0108 NZ_JJLL01000083.1 Protein Homology CDS 123177 123617 . + 0 ID=cds-WP_000902004.1;Parent=gene-AD11_RS03500;Dbxref=GenBank:WP_000902004.1;Name=WP_000902004.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AD11_RS03500;product=PTS sugar transporter subunit IIA;protein_id=WP_000902004.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 123681 124910 . + . ID=gene-AD11_RS03505;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AD11_RS03505;old_locus_tag=AD11_0109 NZ_JJLL01000083.1 Protein Homology CDS 123681 124910 . + 0 ID=cds-WP_000277917.1;Parent=gene-AD11_RS03505;Dbxref=GenBank:WP_000277917.1;Name=WP_000277917.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AD11_RS03505;product=polysaccharide deacetylase family protein;protein_id=WP_000277917.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 124914 125294 . - . ID=gene-AD11_RS03510;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AD11_RS03510;old_locus_tag=AD11_0110 NZ_JJLL01000083.1 Protein Homology CDS 124914 125294 . - 0 ID=cds-WP_000621515.1;Parent=gene-AD11_RS03510;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AD11_RS03510;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 125300 125443 . - . ID=gene-AD11_RS32000;Name=AD11_RS32000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32000;old_locus_tag=AD11_0111 NZ_JJLL01000083.1 GeneMarkS-2+ CDS 125300 125443 . - 0 ID=cds-WP_187439456.1;Parent=gene-AD11_RS32000;Dbxref=GenBank:WP_187439456.1;Name=WP_187439456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32000;product=hypothetical protein;protein_id=WP_187439456.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 125568 126470 . + . ID=gene-AD11_RS03515;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AD11_RS03515;old_locus_tag=AD11_0112 NZ_JJLL01000083.1 Protein Homology CDS 125568 126470 . + 0 ID=cds-WP_000339954.1;Parent=gene-AD11_RS03515;Dbxref=GenBank:WP_000339954.1;Name=WP_000339954.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414674.1;locus_tag=AD11_RS03515;product=recombination-promoting nuclease RpnC;protein_id=WP_000339954.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 126544 127395 . - . ID=gene-AD11_RS03520;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AD11_RS03520;old_locus_tag=AD11_0113 NZ_JJLL01000083.1 Protein Homology CDS 126544 127395 . - 0 ID=cds-WP_000905383.1;Parent=gene-AD11_RS03520;Dbxref=GenBank:WP_000905383.1;Name=WP_000905383.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AD11_RS03520;product=pantoate--beta-alanine ligase;protein_id=WP_000905383.1;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 127407 128201 . - . ID=gene-AD11_RS03525;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AD11_RS03525;old_locus_tag=AD11_0114 NZ_JJLL01000083.1 Protein Homology CDS 127407 128201 . - 0 ID=cds-WP_000805497.1;Parent=gene-AD11_RS03525;Dbxref=GenBank:WP_000805497.1;Name=WP_000805497.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AD11_RS03525;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_000805497.1;transl_table=11 NZ_JJLL01000083.1 RefSeq pseudogene 128315 129466 . - . ID=gene-AD11_RS03530;Name=yadC;end_range=129466,.;gbkey=Gene;gene=yadC;gene_biotype=pseudogene;locus_tag=AD11_RS03530;old_locus_tag=AD11_0115;partial=true;pseudo=true NZ_JJLL01000083.1 Protein Homology CDS 128315 129466 . - 0 ID=cds-AD11_RS03530;Parent=gene-AD11_RS03530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=129466,.;gbkey=CDS;gene=yadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414677.1;locus_tag=AD11_RS03530;partial=true;product=fimbrial tip-adhesin YadC;pseudo=true;transl_table=11 NZ_JJLL01000083.1 RefSeq gene 129480 130708 . - . ID=gene-AD11_RS03535;Name=AD11_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS03535;old_locus_tag=AD11_0116 NZ_JJLL01000083.1 Protein Homology CDS 130393 130708 . - 0 ID=cds-WP_148724995.1;Parent=gene-AD11_RS03535;Dbxref=GenBank:WP_148724995.1;Name=WP_148724995.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AD11_RS03535;product=IS3-like element IS2 family transposase;protein_id=WP_148724995.1;transl_table=11 NZ_JJLL01000083.1 Protein Homology CDS 129480 130393 . - 2 ID=cds-WP_148724995.1;Parent=gene-AD11_RS03535;Dbxref=GenBank:WP_148724995.1;Name=WP_148724995.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AD11_RS03535;product=IS3-like element IS2 family transposase;protein_id=WP_148724995.1;transl_table=11 ##sequence-region NZ_JJLL01000084.1 1 73298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000084.1 RefSeq region 1 73298 . + . ID=NZ_JJLL01000084.1:1..73298;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000084.1 RefSeq gene 1 303 . - . ID=gene-AD11_RS03545;Name=AD11_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS03545;old_locus_tag=AD11_0118;partial=true;start_range=.,1 NZ_JJLL01000084.1 Protein Homology CDS 1 303 . - 0 ID=cds-WP_000567742.1;Parent=gene-AD11_RS03545;Dbxref=GenBank:WP_000567742.1;Name=WP_000567742.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AD11_RS03545;partial=true;product=transposase;protein_id=WP_000567742.1;start_range=.,1;transl_table=11 NZ_JJLL01000084.1 RefSeq pseudogene 395 484 . - . ID=gene-AD11_RS32420;Name=AD11_RS32420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32420;partial=true;pseudo=true;start_range=.,395 NZ_JJLL01000084.1 Protein Homology CDS 395 484 . - 0 ID=cds-AD11_RS32420;Parent=gene-AD11_RS32420;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414677.1;locus_tag=AD11_RS32420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,395;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 534 1130 . - . ID=gene-AD11_RS03550;Name=yadK;gbkey=Gene;gene=yadK;gene_biotype=protein_coding;locus_tag=AD11_RS03550;old_locus_tag=AD11_0119 NZ_JJLL01000084.1 Protein Homology CDS 534 1130 . - 0 ID=cds-WP_000553748.1;Parent=gene-AD11_RS03550;Dbxref=GenBank:WP_000553748.1;Name=WP_000553748.1;gbkey=CDS;gene=yadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414678.1;locus_tag=AD11_RS03550;product=fimbrial-like protein;protein_id=WP_000553748.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 1157 1762 . - . ID=gene-AD11_RS03555;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;locus_tag=AD11_RS03555;old_locus_tag=AD11_0120 NZ_JJLL01000084.1 Protein Homology CDS 1157 1762 . - 0 ID=cds-WP_001310526.1;Parent=gene-AD11_RS03555;Dbxref=GenBank:WP_001310526.1;Name=WP_001310526.1;gbkey=CDS;gene=yadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414679.1;locus_tag=AD11_RS03555;product=fimbrial-like protein YadL;protein_id=WP_001310526.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 1774 2343 . - . ID=gene-AD11_RS03560;Name=yadM;gbkey=Gene;gene=yadM;gene_biotype=protein_coding;locus_tag=AD11_RS03560;old_locus_tag=AD11_0121 NZ_JJLL01000084.1 Protein Homology CDS 1774 2343 . - 0 ID=cds-WP_000598300.1;Parent=gene-AD11_RS03560;Dbxref=GenBank:WP_000598300.1;Name=WP_000598300.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadM;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414680.4;locus_tag=AD11_RS03560;product=fimbrial protein;protein_id=WP_000598300.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 2360 4957 . - . ID=gene-AD11_RS03565;Name=htrE;gbkey=Gene;gene=htrE;gene_biotype=protein_coding;locus_tag=AD11_RS03565;old_locus_tag=AD11_0123 NZ_JJLL01000084.1 Protein Homology CDS 2360 4957 . - 0 ID=cds-WP_001514915.1;Parent=gene-AD11_RS03565;Dbxref=GenBank:WP_001514915.1;Name=WP_001514915.1;gbkey=CDS;gene=htrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414681.1;locus_tag=AD11_RS03565;product=Yad fimbria usher protein HtrE;protein_id=WP_001514915.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 4992 5732 . - . ID=gene-AD11_RS03570;Name=yadV;gbkey=Gene;gene=yadV;gene_biotype=protein_coding;locus_tag=AD11_RS03570;old_locus_tag=AD11_0124 NZ_JJLL01000084.1 Protein Homology CDS 4992 5732 . - 0 ID=cds-WP_000465933.1;Parent=gene-AD11_RS03570;Dbxref=GenBank:WP_000465933.1;Name=WP_000465933.1;gbkey=CDS;gene=yadV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414682.1;locus_tag=AD11_RS03570;product=fimbrial chaperone;protein_id=WP_000465933.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 5837 6421 . - . ID=gene-AD11_RS03575;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;locus_tag=AD11_RS03575;old_locus_tag=AD11_0126 NZ_JJLL01000084.1 Protein Homology CDS 5837 6421 . - 0 ID=cds-WP_000038438.1;Parent=gene-AD11_RS03575;Dbxref=GenBank:WP_000038438.1;Name=WP_000038438.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadN;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=AD11_RS03575;product=fimbrial protein;protein_id=WP_000038438.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 6791 7270 . - . ID=gene-AD11_RS03580;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AD11_RS03580;old_locus_tag=AD11_0127 NZ_JJLL01000084.1 Protein Homology CDS 6791 7270 . - 0 ID=cds-WP_000215138.1;Parent=gene-AD11_RS03580;Dbxref=GenBank:WP_000215138.1;Name=WP_000215138.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414684.1;locus_tag=AD11_RS03580;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215138.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 7267 8664 . - . ID=gene-AD11_RS03585;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AD11_RS03585;old_locus_tag=AD11_0128 NZ_JJLL01000084.1 Protein Homology CDS 7267 8664 . - 0 ID=cds-WP_012304915.1;Parent=gene-AD11_RS03585;Dbxref=GenBank:WP_012304915.1;Name=WP_012304915.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AD11_RS03585;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_012304915.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 8724 9620 . - . ID=gene-AD11_RS03590;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AD11_RS03590;old_locus_tag=AD11_0129 NZ_JJLL01000084.1 Protein Homology CDS 8724 9620 . - 0 ID=cds-WP_000132643.1;Parent=gene-AD11_RS03590;Dbxref=GenBank:WP_000132643.1;Name=WP_000132643.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AD11_RS03590;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_000132643.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 9687 10142 . - . ID=gene-AD11_RS03595;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AD11_RS03595;old_locus_tag=AD11_0130 NZ_JJLL01000084.1 Protein Homology CDS 9687 10142 . - 0 ID=cds-WP_001155227.1;Parent=gene-AD11_RS03595;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AD11_RS03595;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 10320 11024 . - . ID=gene-AD11_RS03600;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AD11_RS03600;old_locus_tag=AD11_0131 NZ_JJLL01000084.1 Protein Homology CDS 10320 11024 . - 0 ID=cds-WP_000396036.1;Parent=gene-AD11_RS03600;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AD11_RS03600;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 11039 11569 . - . ID=gene-AD11_RS03605;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AD11_RS03605;old_locus_tag=AD11_0132 NZ_JJLL01000084.1 Protein Homology CDS 11039 11569 . - 0 ID=cds-WP_001294674.1;Parent=gene-AD11_RS03605;Dbxref=GenBank:WP_001294674.1;Name=WP_001294674.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AD11_RS03605;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294674.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 11643 14072 . + . ID=gene-AD11_RS03610;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AD11_RS03610;old_locus_tag=AD11_0133 NZ_JJLL01000084.1 Protein Homology CDS 11643 14072 . + 0 ID=cds-WP_001548116.1;Parent=gene-AD11_RS03610;Dbxref=GenBank:WP_001548116.1;Name=WP_001548116.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=AD11_RS03610;product=ATP-dependent helicase HrpB;protein_id=WP_001548116.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 14268 16802 . + . ID=gene-AD11_RS03620;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AD11_RS03620;old_locus_tag=AD11_0134 NZ_JJLL01000084.1 Protein Homology CDS 14268 16802 . + 0 ID=cds-WP_033865159.1;Parent=gene-AD11_RS03620;Dbxref=GenBank:WP_033865159.1;Name=WP_033865159.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706097.2;locus_tag=AD11_RS03620;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_033865159.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 17022 19265 . + . ID=gene-AD11_RS03625;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AD11_RS03625;old_locus_tag=AD11_0136 NZ_JJLL01000084.1 Protein Homology CDS 17022 19265 . + 0 ID=cds-WP_000124421.1;Parent=gene-AD11_RS03625;Dbxref=GenBank:WP_000124421.1;Name=WP_000124421.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=AD11_RS03625;product=ferrichrome porin FhuA;protein_id=WP_000124421.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 19316 20113 . + . ID=gene-AD11_RS03630;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AD11_RS03630;old_locus_tag=AD11_0137 NZ_JJLL01000084.1 Protein Homology CDS 19316 20113 . + 0 ID=cds-WP_001158931.1;Parent=gene-AD11_RS03630;Dbxref=GenBank:WP_001158931.1;Name=WP_001158931.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414693.1;locus_tag=AD11_RS03630;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158931.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 20113 21003 . + . ID=gene-AD11_RS03635;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AD11_RS03635;old_locus_tag=AD11_0138 NZ_JJLL01000084.1 Protein Homology CDS 20113 21003 . + 0 ID=cds-WP_000015990.1;Parent=gene-AD11_RS03635;Dbxref=GenBank:WP_000015990.1;Name=WP_000015990.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=AD11_RS03635;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_000015990.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 21000 22982 . + . ID=gene-AD11_RS03640;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AD11_RS03640;old_locus_tag=AD11_0139 NZ_JJLL01000084.1 Protein Homology CDS 21000 22982 . + 0 ID=cds-WP_016236457.1;Parent=gene-AD11_RS03640;Dbxref=GenBank:WP_016236457.1;Name=WP_016236457.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=AD11_RS03640;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_016236457.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 23140 24420 . - . ID=gene-AD11_RS03645;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AD11_RS03645;old_locus_tag=AD11_0140 NZ_JJLL01000084.1 Protein Homology CDS 23140 24420 . - 0 ID=cds-WP_033865160.1;Parent=gene-AD11_RS03645;Dbxref=GenBank:WP_033865160.1;Name=WP_033865160.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AD11_RS03645;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_033865160.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 24586 24633 . + . ID=gene-AD11_RS32425;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AD11_RS32425 NZ_JJLL01000084.1 Protein Homology CDS 24586 24633 . + 0 ID=cds-WP_211180485.1;Parent=gene-AD11_RS32425;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AD11_RS32425;product=protein YadX;protein_id=WP_211180485.1;transl_table=11 NZ_JJLL01000084.1 RefSeq pseudogene 24645 26066 . + . ID=gene-AD11_RS03650;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=pseudogene;locus_tag=AD11_RS03650;old_locus_tag=AD11_0141;pseudo=true NZ_JJLL01000084.1 Protein Homology CDS 24645 26066 . + 0 ID=cds-AD11_RS03650;Parent=gene-AD11_RS03650;Note=internal stop;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AD11_RS03650;product=H(+)/Cl(-) exchange transporter ClcA;pseudo=true;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 26090 26155 . + . ID=gene-AD11_RS31360;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AD11_RS31360 NZ_JJLL01000084.1 Protein Homology CDS 26090 26155 . + 0 ID=cds-WP_120795373.1;Parent=gene-AD11_RS31360;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AD11_RS31360;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 26148 26492 . + . ID=gene-AD11_RS03655;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AD11_RS03655;old_locus_tag=AD11_0142 NZ_JJLL01000084.1 Protein Homology CDS 26148 26492 . + 0 ID=cds-WP_001295564.1;Parent=gene-AD11_RS03655;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AD11_RS03655;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 26539 27162 . - . ID=gene-AD11_RS03660;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AD11_RS03660;old_locus_tag=AD11_0143 NZ_JJLL01000084.1 Protein Homology CDS 26539 27162 . - 0 ID=cds-WP_000964221.1;Parent=gene-AD11_RS03660;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AD11_RS03660;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 27200 28000 . - . ID=gene-AD11_RS03665;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AD11_RS03665;old_locus_tag=AD11_0144 NZ_JJLL01000084.1 Protein Homology CDS 27200 28000 . - 0 ID=cds-WP_001129927.1;Parent=gene-AD11_RS03665;Dbxref=GenBank:WP_001129927.1;Name=WP_001129927.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AD11_RS03665;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 27993 28691 . - . ID=gene-AD11_RS03670;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AD11_RS03670;old_locus_tag=AD11_0145 NZ_JJLL01000084.1 Protein Homology CDS 27993 28691 . - 0 ID=cds-WP_000689844.1;Parent=gene-AD11_RS03670;Dbxref=GenBank:WP_000689844.1;Name=WP_000689844.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AD11_RS03670;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 28775 30292 . + . ID=gene-AD11_RS03675;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AD11_RS03675;old_locus_tag=AD11_0146 NZ_JJLL01000084.1 Protein Homology CDS 28775 30292 . + 0 ID=cds-WP_033865161.1;Parent=gene-AD11_RS03675;Dbxref=GenBank:WP_033865161.1;Name=WP_033865161.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AD11_RS03675;product=dGTPase;protein_id=WP_033865161.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 30422 31846 . + . ID=gene-AD11_RS03680;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AD11_RS03680;old_locus_tag=AD11_0147 NZ_JJLL01000084.1 Protein Homology CDS 30422 31846 . + 0 ID=cds-WP_000753946.1;Parent=gene-AD11_RS03680;Dbxref=GenBank:WP_000753946.1;Name=WP_000753946.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AD11_RS03680;product=serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 32001 33158 . + . ID=gene-AD11_RS03685;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AD11_RS03685;old_locus_tag=AD11_0148 NZ_JJLL01000084.1 Protein Homology CDS 32001 33158 . + 0 ID=cds-WP_000929439.1;Parent=gene-AD11_RS03685;Dbxref=GenBank:WP_000929439.1;Name=WP_000929439.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308193.1;locus_tag=AD11_RS03685;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929439.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 33247 33633 . - . ID=gene-AD11_RS03690;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AD11_RS03690;old_locus_tag=AD11_0149 NZ_JJLL01000084.1 Protein Homology CDS 33247 33633 . - 0 ID=cds-WP_000272188.1;Parent=gene-AD11_RS03690;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AD11_RS03690;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 33795 34607 . - . ID=gene-AD11_RS03695;Name=yaeI;gbkey=Gene;gene=yaeI;gene_biotype=protein_coding;locus_tag=AD11_RS03695;old_locus_tag=AD11_0150 NZ_JJLL01000084.1 Protein Homology CDS 33795 34607 . - 0 ID=cds-WP_000625639.1;Parent=gene-AD11_RS03695;Dbxref=GenBank:WP_000625639.1;Name=WP_000625639.1;gbkey=CDS;gene=yaeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414706.2;locus_tag=AD11_RS03695;product=phosphodiesterase YaeI;protein_id=WP_000625639.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 34662 35486 . - . ID=gene-AD11_RS03700;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AD11_RS03700;old_locus_tag=AD11_0151 NZ_JJLL01000084.1 Protein Homology CDS 34662 35486 . - 0 ID=cds-WP_001186650.1;Parent=gene-AD11_RS03700;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AD11_RS03700;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 35517 38189 . - . ID=gene-AD11_RS03705;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AD11_RS03705;old_locus_tag=AD11_0152 NZ_JJLL01000084.1 Protein Homology CDS 35517 38189 . - 0 ID=cds-WP_016236458.1;Parent=gene-AD11_RS03705;Dbxref=GenBank:WP_016236458.1;Name=WP_016236458.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308196.1;locus_tag=AD11_RS03705;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_016236458.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 38251 39045 . - . ID=gene-AD11_RS03710;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AD11_RS03710;old_locus_tag=AD11_0153 NZ_JJLL01000084.1 Protein Homology CDS 38251 39045 . - 0 ID=cds-WP_001018194.1;Parent=gene-AD11_RS03710;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AD11_RS03710;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 39413 40138 . + . ID=gene-AD11_RS03715;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AD11_RS03715;old_locus_tag=AD11_0154 NZ_JJLL01000084.1 Protein Homology CDS 39413 40138 . + 0 ID=cds-WP_000246884.1;Parent=gene-AD11_RS03715;Dbxref=GenBank:WP_000246884.1;Name=WP_000246884.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AD11_RS03715;product=30S ribosomal protein S2;protein_id=WP_000246884.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 40396 41247 . + . ID=gene-AD11_RS03720;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AD11_RS03720;old_locus_tag=AD11_0156 NZ_JJLL01000084.1 Protein Homology CDS 40396 41247 . + 0 ID=cds-WP_000818114.1;Parent=gene-AD11_RS03720;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AD11_RS03720;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 41394 42119 . + . ID=gene-AD11_RS03725;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AD11_RS03725;old_locus_tag=AD11_0157 NZ_JJLL01000084.1 Protein Homology CDS 41394 42119 . + 0 ID=cds-WP_000224573.1;Parent=gene-AD11_RS03725;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AD11_RS03725;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 42411 42968 . + . ID=gene-AD11_RS03730;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AD11_RS03730;old_locus_tag=AD11_0158 NZ_JJLL01000084.1 Protein Homology CDS 42411 42968 . + 0 ID=cds-WP_000622418.1;Parent=gene-AD11_RS03730;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AD11_RS03730;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 43060 44256 . + . ID=gene-AD11_RS03735;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AD11_RS03735;old_locus_tag=AD11_0159 NZ_JJLL01000084.1 Protein Homology CDS 43060 44256 . + 0 ID=cds-WP_033865163.1;Parent=gene-AD11_RS03735;Dbxref=GenBank:WP_033865163.1;Name=WP_033865163.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AD11_RS03735;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_033865163.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 44445 45203 . + . ID=gene-AD11_RS03740;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AD11_RS03740;old_locus_tag=AD11_0160 NZ_JJLL01000084.1 Protein Homology CDS 44445 45203 . + 0 ID=cds-WP_001295562.1;Parent=gene-AD11_RS03740;Dbxref=GenBank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AD11_RS03740;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 45216 46073 . + . ID=gene-AD11_RS03745;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AD11_RS03745;old_locus_tag=AD11_0162 NZ_JJLL01000084.1 Protein Homology CDS 45216 46073 . + 0 ID=cds-WP_000922446.1;Parent=gene-AD11_RS03745;Dbxref=GenBank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AD11_RS03745;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 46085 47437 . + . ID=gene-AD11_RS03750;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AD11_RS03750;old_locus_tag=AD11_0163 NZ_JJLL01000084.1 Protein Homology CDS 46085 47437 . + 0 ID=cds-WP_001295561.1;Parent=gene-AD11_RS03750;Dbxref=GenBank:WP_001295561.1;Name=WP_001295561.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AD11_RS03750;product=sigma E protease regulator RseP;protein_id=WP_001295561.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 47467 49899 . + . ID=gene-AD11_RS03755;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AD11_RS03755;old_locus_tag=AD11_0164 NZ_JJLL01000084.1 Protein Homology CDS 47467 49899 . + 0 ID=cds-WP_001240896.1;Parent=gene-AD11_RS03755;Dbxref=GenBank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AD11_RS03755;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 50021 50506 . + . ID=gene-AD11_RS03760;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AD11_RS03760;old_locus_tag=AD11_0165 NZ_JJLL01000084.1 Protein Homology CDS 50021 50506 . + 0 ID=cds-WP_000758956.1;Parent=gene-AD11_RS03760;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AD11_RS03760;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 50510 51535 . + . ID=gene-AD11_RS03765;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AD11_RS03765;old_locus_tag=AD11_0166 NZ_JJLL01000084.1 Protein Homology CDS 50510 51535 . + 0 ID=cds-WP_001139279.1;Parent=gene-AD11_RS03765;Dbxref=GenBank:WP_001139279.1;Name=WP_001139279.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AD11_RS03765;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 51640 52095 . + . ID=gene-AD11_RS03770;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AD11_RS03770;old_locus_tag=AD11_0167 NZ_JJLL01000084.1 Protein Homology CDS 51640 52095 . + 0 ID=cds-WP_000210739.1;Parent=gene-AD11_RS03770;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AD11_RS03770;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 52099 52887 . + . ID=gene-AD11_RS03775;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AD11_RS03775;old_locus_tag=AD11_0168 NZ_JJLL01000084.1 Protein Homology CDS 52099 52887 . + 0 ID=cds-WP_000565966.1;Parent=gene-AD11_RS03775;Dbxref=GenBank:WP_000565966.1;Name=WP_000565966.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AD11_RS03775;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 52887 54035 . + . ID=gene-AD11_RS03780;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AD11_RS03780;old_locus_tag=AD11_0169 NZ_JJLL01000084.1 Protein Homology CDS 52887 54035 . + 0 ID=cds-WP_000139667.1;Parent=gene-AD11_RS03780;Dbxref=GenBank:WP_000139667.1;Name=WP_000139667.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AD11_RS03780;product=lipid-A-disaccharide synthase;protein_id=WP_000139667.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 54032 54628 . + . ID=gene-AD11_RS03785;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AD11_RS03785;old_locus_tag=AD11_0170 NZ_JJLL01000084.1 Protein Homology CDS 54032 54628 . + 0 ID=cds-WP_000569423.1;Parent=gene-AD11_RS03785;Dbxref=GenBank:WP_000569423.1;Name=WP_000569423.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308212.1;locus_tag=AD11_RS03785;product=ribonuclease HII;protein_id=WP_000569423.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 54665 58147 . + . ID=gene-AD11_RS03790;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AD11_RS03790;old_locus_tag=AD11_0171 NZ_JJLL01000084.1 Protein Homology CDS 54665 58147 . + 0 ID=cds-WP_001471003.1;Parent=gene-AD11_RS03790;Dbxref=GenBank:WP_001471003.1;Name=WP_001471003.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308213.1;locus_tag=AD11_RS03790;product=DNA polymerase III subunit alpha;protein_id=WP_001471003.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 58160 59119 . + . ID=gene-AD11_RS03795;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AD11_RS03795;old_locus_tag=AD11_0172 NZ_JJLL01000084.1 Protein Homology CDS 58160 59119 . + 0 ID=cds-WP_000055746.1;Parent=gene-AD11_RS03795;Dbxref=GenBank:WP_000055746.1;Name=WP_000055746.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AD11_RS03795;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055746.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 59218 61359 . + . ID=gene-AD11_RS03800;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AD11_RS03800;old_locus_tag=AD11_0173 NZ_JJLL01000084.1 Protein Homology CDS 59218 61359 . + 0 ID=cds-WP_001021017.1;Parent=gene-AD11_RS03800;Dbxref=GenBank:WP_001021017.1;Name=WP_001021017.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AD11_RS03800;product=lysine decarboxylase LdcC;protein_id=WP_001021017.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 61416 61805 . + . ID=gene-AD11_RS03805;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AD11_RS03805;old_locus_tag=AD11_0174 NZ_JJLL01000084.1 Protein Homology CDS 61416 61805 . + 0 ID=cds-WP_000901098.1;Parent=gene-AD11_RS03805;Dbxref=GenBank:WP_000901098.1;Name=WP_000901098.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=AD11_RS03805;product=VOC family protein;protein_id=WP_000901098.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 61870 63168 . + . ID=gene-AD11_RS03810;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AD11_RS03810;old_locus_tag=AD11_0175 NZ_JJLL01000084.1 Protein Homology CDS 61870 63168 . + 0 ID=cds-WP_000176556.1;Parent=gene-AD11_RS03810;Dbxref=GenBank:WP_000176556.1;Name=WP_000176556.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706133.1;locus_tag=AD11_RS03810;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_000176556.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 63217 63477 . - . ID=gene-AD11_RS03815;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AD11_RS03815;old_locus_tag=AD11_0176 NZ_JJLL01000084.1 Protein Homology CDS 63217 63477 . - 0 ID=cds-WP_000062312.1;Parent=gene-AD11_RS03815;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AD11_RS03815;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 63464 63664 . - . ID=gene-AD11_RS03820;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AD11_RS03820;old_locus_tag=AD11_0177 NZ_JJLL01000084.1 Protein Homology CDS 63464 63664 . - 0 ID=cds-WP_000417058.1;Parent=gene-AD11_RS03820;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AD11_RS03820;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 63830 64375 . + . ID=gene-AD11_RS03825;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AD11_RS03825;old_locus_tag=AD11_0178 NZ_JJLL01000084.1 Protein Homology CDS 63830 64375 . + 0 ID=cds-WP_001185294.1;Parent=gene-AD11_RS03825;Dbxref=GenBank:WP_001185294.1;Name=WP_001185294.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AD11_RS03825;product=YaeQ family protein;protein_id=WP_001185294.1;transl_table=11 NZ_JJLL01000084.1 RefSeq pseudogene 64372 64793 . + . ID=gene-AD11_RS03830;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=pseudogene;locus_tag=AD11_RS03830;old_locus_tag=AD11_0179;pseudo=true NZ_JJLL01000084.1 Protein Homology CDS 64372 64793 . + 0 ID=cds-AD11_RS03830;Parent=gene-AD11_RS03830;Note=frameshifted;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308220.1;locus_tag=AD11_RS03830;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;pseudo=true;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 64807 65517 . + . ID=gene-AD11_RS03835;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AD11_RS03835;old_locus_tag=AD11_0180 NZ_JJLL01000084.1 Protein Homology CDS 64807 65517 . + 0 ID=cds-WP_000239163.1;Parent=gene-AD11_RS03835;Dbxref=GenBank:WP_000239163.1;Name=WP_000239163.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414734.1;locus_tag=AD11_RS03835;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_000239163.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 65672 66496 . - . ID=gene-AD11_RS03840;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;locus_tag=AD11_RS03840;old_locus_tag=AD11_0181 NZ_JJLL01000084.1 Protein Homology CDS 65672 66496 . - 0 ID=cds-WP_001408264.1;Parent=gene-AD11_RS03840;Dbxref=GenBank:WP_001408264.1;Name=WP_001408264.1;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308222.1;locus_tag=AD11_RS03840;product=YaeF family permuted papain-like enzyme;protein_id=WP_001408264.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 66549 68267 . - . ID=gene-AD11_RS03845;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AD11_RS03845;old_locus_tag=AD11_0182 NZ_JJLL01000084.1 Protein Homology CDS 66549 68267 . - 0 ID=cds-WP_001260707.1;Parent=gene-AD11_RS03845;Dbxref=GenBank:WP_001260707.1;Name=WP_001260707.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AD11_RS03845;product=proline--tRNA ligase;protein_id=WP_001260707.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 68378 69085 . - . ID=gene-AD11_RS03850;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AD11_RS03850;old_locus_tag=AD11_0183 NZ_JJLL01000084.1 Protein Homology CDS 68378 69085 . - 0 ID=cds-WP_000094031.1;Parent=gene-AD11_RS03850;Dbxref=GenBank:WP_000094031.1;Name=WP_000094031.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AD11_RS03850;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094031.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 69082 69486 . - . ID=gene-AD11_RS03855;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AD11_RS03855;old_locus_tag=AD11_0184 NZ_JJLL01000084.1 Protein Homology CDS 69082 69486 . - 0 ID=cds-WP_001202329.1;Parent=gene-AD11_RS03855;Dbxref=GenBank:WP_001202329.1;Name=WP_001202329.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AD11_RS03855;product=Rcs stress response system protein RcsF;protein_id=WP_001202329.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 69604 70419 . - . ID=gene-AD11_RS03860;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AD11_RS03860;old_locus_tag=AD11_0185 NZ_JJLL01000084.1 Protein Homology CDS 69604 70419 . - 0 ID=cds-WP_000874224.1;Parent=gene-AD11_RS03860;Dbxref=GenBank:WP_000874224.1;Name=WP_000874224.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706143.1;locus_tag=AD11_RS03860;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874224.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 70459 71112 . - . ID=gene-AD11_RS03865;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AD11_RS03865;old_locus_tag=AD11_0186 NZ_JJLL01000084.1 Protein Homology CDS 70459 71112 . - 0 ID=cds-WP_001294593.1;Parent=gene-AD11_RS03865;Dbxref=GenBank:WP_001294593.1;Name=WP_001294593.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AD11_RS03865;product=methionine ABC transporter permease MetI;protein_id=WP_001294593.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 71105 72136 . - . ID=gene-AD11_RS03870;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AD11_RS03870;old_locus_tag=AD11_0187 NZ_JJLL01000084.1 Protein Homology CDS 71105 72136 . - 0 ID=cds-WP_000594008.1;Parent=gene-AD11_RS03870;Dbxref=GenBank:WP_000594008.1;Name=WP_000594008.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AD11_RS03870;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000594008.1;transl_table=11 NZ_JJLL01000084.1 RefSeq gene 72324 72896 . + . ID=gene-AD11_RS03875;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AD11_RS03875;old_locus_tag=AD11_0188 NZ_JJLL01000084.1 Protein Homology CDS 72324 72896 . + 0 ID=cds-WP_001140186.1;Parent=gene-AD11_RS03875;Dbxref=GenBank:WP_001140186.1;Name=WP_001140186.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608862.1;locus_tag=AD11_RS03875;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140186.1;transl_table=11 ##sequence-region NZ_JJLL01000085.1 1 1698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000085.1 RefSeq region 1 1698 . + . ID=NZ_JJLL01000085.1:1..1698;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000085.1 RefSeq gene 48 124 . + . ID=gene-AD11_RS03880;Name=AD11_RS03880;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS03880;old_locus_tag=AD11_0189 NZ_JJLL01000085.1 tRNAscan-SE tRNA 48 124 . + . ID=rna-AD11_RS03880;Parent=gene-AD11_RS03880;anticodon=(pos:82..84);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03880;product=tRNA-Ile NZ_JJLL01000085.1 tRNAscan-SE exon 48 124 . + . ID=exon-AD11_RS03880-1;Parent=rna-AD11_RS03880;anticodon=(pos:82..84);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03880;product=tRNA-Ile NZ_JJLL01000085.1 RefSeq gene 167 242 . + . ID=gene-AD11_RS03885;Name=AD11_RS03885;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS03885;old_locus_tag=AD11_0190 NZ_JJLL01000085.1 tRNAscan-SE tRNA 167 242 . + . ID=rna-AD11_RS03885;Parent=gene-AD11_RS03885;anticodon=(pos:200..202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03885;product=tRNA-Ala NZ_JJLL01000085.1 tRNAscan-SE exon 167 242 . + . ID=exon-AD11_RS03885-1;Parent=rna-AD11_RS03885;anticodon=(pos:200..202);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03885;product=tRNA-Ala NZ_JJLL01000085.1 RefSeq gene 417 1698 . + . ID=gene-AD11_RS03890;Name=AD11_RS03890;end_range=1698,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS03890;old_locus_tag=AD11_0191;partial=true NZ_JJLL01000085.1 cmsearch rRNA 417 1698 . + . ID=rna-AD11_RS03890;Parent=gene-AD11_RS03890;Dbxref=RFAM:RF02541;end_range=1698,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03890;partial=true;product=23S ribosomal RNA NZ_JJLL01000085.1 cmsearch exon 417 1698 . + . ID=exon-AD11_RS03890-1;Parent=rna-AD11_RS03890;Dbxref=RFAM:RF02541;end_range=1698,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03890;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLL01000086.1 1 1262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000086.1 RefSeq region 1 1262 . + . ID=NZ_JJLL01000086.1:1..1262;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000086.1 RefSeq gene 1 1032 . + . ID=gene-AD11_RS03895;Name=AD11_RS03895;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS03895;partial=true;start_range=.,1 NZ_JJLL01000086.1 cmsearch rRNA 1 1032 . + . ID=rna-AD11_RS03895;Parent=gene-AD11_RS03895;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03895;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000086.1 cmsearch exon 1 1032 . + . ID=exon-AD11_RS03895-1;Parent=rna-AD11_RS03895;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03895;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJLL01000087.1 1 480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000087.1 RefSeq region 1 480 . + . ID=NZ_JJLL01000087.1:1..480;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000087.1 RefSeq gene 1 105 . + . ID=gene-AD11_RS03900;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS03900;old_locus_tag=AD11_0192;partial=true;start_range=.,1 NZ_JJLL01000087.1 cmsearch rRNA 1 105 . + . ID=rna-AD11_RS03900;Parent=gene-AD11_RS03900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03900;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJLL01000087.1 cmsearch exon 1 105 . + . ID=exon-AD11_RS03900-1;Parent=rna-AD11_RS03900;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03900;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJLL01000087.1 RefSeq gene 120 195 . + . ID=gene-AD11_RS03905;Name=AD11_RS03905;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS03905;old_locus_tag=AD11_0193 NZ_JJLL01000087.1 tRNAscan-SE tRNA 120 195 . + . ID=rna-AD11_RS03905;Parent=gene-AD11_RS03905;anticodon=(pos:153..155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03905;product=tRNA-Thr NZ_JJLL01000087.1 tRNAscan-SE exon 120 195 . + . ID=exon-AD11_RS03905-1;Parent=rna-AD11_RS03905;anticodon=(pos:153..155);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03905;product=tRNA-Thr NZ_JJLL01000087.1 RefSeq gene 235 350 . + . ID=gene-AD11_RS03910;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS03910;old_locus_tag=AD11_0194 NZ_JJLL01000087.1 cmsearch rRNA 235 350 . + . ID=rna-AD11_RS03910;Parent=gene-AD11_RS03910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03910;product=5S ribosomal RNA NZ_JJLL01000087.1 cmsearch exon 235 350 . + . ID=exon-AD11_RS03910-1;Parent=rna-AD11_RS03910;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS03910;product=5S ribosomal RNA NZ_JJLL01000087.1 RefSeq gene 405 478 . + . ID=gene-AD11_RS03915;Name=AD11_RS03915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS03915;old_locus_tag=AD11_0195 NZ_JJLL01000087.1 tRNAscan-SE tRNA 405 478 . + . ID=rna-AD11_RS03915;Parent=gene-AD11_RS03915;anticodon=(pos:439..441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03915;product=tRNA-Asp NZ_JJLL01000087.1 tRNAscan-SE exon 405 478 . + . ID=exon-AD11_RS03915-1;Parent=rna-AD11_RS03915;anticodon=(pos:439..441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03915;product=tRNA-Asp ##sequence-region NZ_JJLL01000088.1 1 9148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000088.1 RefSeq region 1 9148 . + . ID=NZ_JJLL01000088.1:1..9148;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000088.1 RefSeq gene 214 1017 . + . ID=gene-AD11_RS03920;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AD11_RS03920;old_locus_tag=AD11_0197 NZ_JJLL01000088.1 Protein Homology CDS 214 1017 . + 0 ID=cds-WP_000997020.1;Parent=gene-AD11_RS03920;Dbxref=GenBank:WP_000997020.1;Name=WP_000997020.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308230.1;locus_tag=AD11_RS03920;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_000997020.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 1014 1928 . - . ID=gene-AD11_RS03925;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AD11_RS03925;old_locus_tag=AD11_0198 NZ_JJLL01000088.1 Protein Homology CDS 1014 1928 . - 0 ID=cds-WP_000648583.1;Parent=gene-AD11_RS03925;Dbxref=GenBank:WP_000648583.1;Name=WP_000648583.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308231.1;locus_tag=AD11_RS03925;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648583.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 2169 2969 . + . ID=gene-AD11_RS03930;Name=AD11_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS03930;old_locus_tag=AD11_0199 NZ_JJLL01000088.1 Protein Homology CDS 2169 2969 . + 0 ID=cds-WP_001230983.1;Parent=gene-AD11_RS03930;Dbxref=GenBank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AD11_RS03930;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 3047 3817 . + . ID=gene-AD11_RS03935;Name=AD11_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS03935;old_locus_tag=AD11_0200 NZ_JJLL01000088.1 Protein Homology CDS 3047 3817 . + 0 ID=cds-WP_000211686.1;Parent=gene-AD11_RS03935;Dbxref=GenBank:WP_000211686.1;Name=WP_000211686.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308233.1;locus_tag=AD11_RS03935;product=class I SAM-dependent methyltransferase;protein_id=WP_000211686.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 3865 5223 . - . ID=gene-AD11_RS03940;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AD11_RS03940;old_locus_tag=AD11_0201 NZ_JJLL01000088.1 Protein Homology CDS 3865 5223 . - 0 ID=cds-WP_000644685.1;Parent=gene-AD11_RS03940;Dbxref=GenBank:WP_000644685.1;Name=WP_000644685.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AD11_RS03940;product=murein transglycosylase D;protein_id=WP_000644685.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 5295 6050 . - . ID=gene-AD11_RS03945;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AD11_RS03945;old_locus_tag=AD11_0202 NZ_JJLL01000088.1 Protein Homology CDS 5295 6050 . - 0 ID=cds-WP_033865165.1;Parent=gene-AD11_RS03945;Dbxref=GenBank:WP_033865165.1;Name=WP_033865165.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AD11_RS03945;product=hydroxyacylglutathione hydrolase;protein_id=WP_033865165.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 6084 6806 . + . ID=gene-AD11_RS03950;Name=AD11_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS03950;old_locus_tag=AD11_0203 NZ_JJLL01000088.1 Protein Homology CDS 6084 6806 . + 0 ID=cds-WP_001295200.1;Parent=gene-AD11_RS03950;Dbxref=GenBank:WP_001295200.1;Name=WP_001295200.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AD11_RS03950;product=class I SAM-dependent methyltransferase;protein_id=WP_001295200.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 6803 7270 . - . ID=gene-AD11_RS03955;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AD11_RS03955;old_locus_tag=AD11_0204 NZ_JJLL01000088.1 Protein Homology CDS 6803 7270 . - 0 ID=cds-WP_000917883.1;Parent=gene-AD11_RS03955;Dbxref=GenBank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AD11_RS03955;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 7335 8066 . + . ID=gene-AD11_RS03960;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AD11_RS03960;old_locus_tag=AD11_0205 NZ_JJLL01000088.1 Protein Homology CDS 7335 8066 . + 0 ID=cds-WP_001300756.1;Parent=gene-AD11_RS03960;Dbxref=GenBank:WP_001300756.1;Name=WP_001300756.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706156.2;locus_tag=AD11_RS03960;product=DNA polymerase III subunit epsilon;protein_id=WP_001300756.1;transl_table=11 NZ_JJLL01000088.1 RefSeq gene 8199 8275 . + . ID=gene-AD11_RS03965;Name=AD11_RS03965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS03965;old_locus_tag=AD11_0206 NZ_JJLL01000088.1 tRNAscan-SE tRNA 8199 8275 . + . ID=rna-AD11_RS03965;Parent=gene-AD11_RS03965;anticodon=(pos:8233..8235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03965;product=tRNA-Asp NZ_JJLL01000088.1 tRNAscan-SE exon 8199 8275 . + . ID=exon-AD11_RS03965-1;Parent=rna-AD11_RS03965;anticodon=(pos:8233..8235);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS03965;product=tRNA-Asp NZ_JJLL01000088.1 RefSeq pseudogene 8425 9121 . - . ID=gene-AD11_RS03970;Name=AD11_RS03970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS03970;old_locus_tag=AD11_0207;pseudo=true NZ_JJLL01000088.1 Protein Homology CDS 8425 9121 . - 0 ID=cds-AD11_RS03970;Parent=gene-AD11_RS03970;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS03970;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000089.1 1 87677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000089.1 RefSeq region 1 87677 . + . ID=NZ_JJLL01000089.1:1..87677;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000089.1 RefSeq pseudogene 1 1131 . + . ID=gene-AD11_RS30475;Name=AD11_RS30475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30475;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000089.1 Protein Homology CDS 1 1131 . + 1 ID=cds-AD11_RS30475;Parent=gene-AD11_RS30475;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS30475;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 1173 1943 . - . ID=gene-AD11_RS03980;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AD11_RS03980;old_locus_tag=AD11_0210 NZ_JJLL01000089.1 Protein Homology CDS 1173 1943 . - 0 ID=cds-WP_001118040.1;Parent=gene-AD11_RS03980;Dbxref=GenBank:WP_001118040.1;Name=WP_001118040.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308273.1;locus_tag=AD11_RS03980;product=2-oxoglutaramate amidase;protein_id=WP_001118040.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 2124 2570 . + . ID=gene-AD11_RS03985;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AD11_RS03985;old_locus_tag=AD11_0211 NZ_JJLL01000089.1 Protein Homology CDS 2124 2570 . + 0 ID=cds-WP_001308392.1;Parent=gene-AD11_RS03985;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AD11_RS03985;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 2613 5057 . - . ID=gene-AD11_RS03990;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AD11_RS03990;old_locus_tag=AD11_0212 NZ_JJLL01000089.1 Protein Homology CDS 2613 5057 . - 0 ID=cds-WP_000973083.1;Parent=gene-AD11_RS03990;Dbxref=GenBank:WP_000973083.1;Name=WP_000973083.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AD11_RS03990;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973083.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 5297 5875 . + . ID=gene-AD11_RS03995;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AD11_RS03995;old_locus_tag=AD11_0213 NZ_JJLL01000089.1 Protein Homology CDS 5297 5875 . + 0 ID=cds-WP_000284050.1;Parent=gene-AD11_RS03995;Dbxref=GenBank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AD11_RS03995;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 6081 6848 . + . ID=gene-AD11_RS04000;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AD11_RS04000;old_locus_tag=AD11_0214 NZ_JJLL01000089.1 Protein Homology CDS 6081 6848 . + 0 ID=cds-WP_000333379.1;Parent=gene-AD11_RS04000;Dbxref=GenBank:WP_000333379.1;Name=WP_000333379.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706226.2;locus_tag=AD11_RS04000;product=class II glutamine amidotransferase;protein_id=WP_000333379.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 6819 7559 . - . ID=gene-AD11_RS04005;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AD11_RS04005;old_locus_tag=AD11_0215 NZ_JJLL01000089.1 Protein Homology CDS 6819 7559 . - 0 ID=cds-WP_001225679.1;Parent=gene-AD11_RS04005;Dbxref=GenBank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AD11_RS04005;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 7851 8609 . + . ID=gene-AD11_RS04010;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AD11_RS04010;old_locus_tag=AD11_0217 NZ_JJLL01000089.1 Protein Homology CDS 7851 8609 . + 0 ID=cds-WP_000009292.1;Parent=gene-AD11_RS04010;Dbxref=GenBank:WP_000009292.1;Name=WP_000009292.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012599877.1;locus_tag=AD11_RS04010;product=C40 family peptidase;protein_id=WP_000009292.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 8785 9282 . + . ID=gene-AD11_RS04015;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AD11_RS04015;old_locus_tag=AD11_0218 NZ_JJLL01000089.1 Protein Homology CDS 8785 9282 . + 0 ID=cds-WP_000006260.1;Parent=gene-AD11_RS04015;Dbxref=GenBank:WP_000006260.1;Name=WP_000006260.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706228.1;locus_tag=AD11_RS04015;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006260.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 9506 11599 . - . ID=gene-AD11_RS04020;Name=AD11_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04020;old_locus_tag=AD11_0220 NZ_JJLL01000089.1 Protein Homology CDS 9506 11599 . - 0 ID=cds-WP_033865172.1;Parent=gene-AD11_RS04020;Dbxref=GenBank:WP_033865172.1;Name=WP_033865172.1;Ontology_term=GO:0009306,GO:0044780,GO:0071978;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AD11_RS04020;product=flagellar biosynthesis protein FlhA;protein_id=WP_033865172.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 11583 12722 . - . ID=gene-AD11_RS04025;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AD11_RS04025;old_locus_tag=AD11_0221 NZ_JJLL01000089.1 Protein Homology CDS 11583 12722 . - 0 ID=cds-WP_033866279.1;Parent=gene-AD11_RS04025;Dbxref=GenBank:WP_033866279.1;Name=WP_033866279.1;Ontology_term=GO:0009306,GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA,protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236920.1;locus_tag=AD11_RS04025;product=flagellar type III secretion system protein FlhB;protein_id=WP_033866279.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 12712 13494 . - . ID=gene-AD11_RS04030;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AD11_RS04030;old_locus_tag=AD11_0222 NZ_JJLL01000089.1 Protein Homology CDS 12712 13494 . - 0 ID=cds-WP_001260505.1;Parent=gene-AD11_RS04030;Dbxref=GenBank:WP_001260505.1;Name=WP_001260505.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001260509.1;locus_tag=AD11_RS04030;product=flagellar biosynthetic protein FliR;protein_id=WP_001260505.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 13496 13768 . - . ID=gene-AD11_RS04035;Name=AD11_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04035;old_locus_tag=AD11_0223 NZ_JJLL01000089.1 Protein Homology CDS 13496 13768 . - 0 ID=cds-WP_000958542.1;Parent=gene-AD11_RS04035;Dbxref=GenBank:WP_000958542.1;Name=WP_000958542.1;Ontology_term=GO:0009306,GO:0044780,GO:0005886,GO:0009425;gbkey=CDS;go_component=plasma membrane|0005886||IEA,bacterial-type flagellum basal body|0009425||IEA;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001341234.1;locus_tag=AD11_RS04035;product=flagellar biosynthetic protein FliQ;protein_id=WP_000958542.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 13771 14523 . - . ID=gene-AD11_RS04040;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AD11_RS04040;old_locus_tag=AD11_0224 NZ_JJLL01000089.1 Protein Homology CDS 13771 14523 . - 0 ID=cds-WP_000830274.1;Parent=gene-AD11_RS04040;Dbxref=GenBank:WP_000830274.1;Name=WP_000830274.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538309.1;locus_tag=AD11_RS04040;product=flagellar type III secretion system pore protein FliP;protein_id=WP_000830274.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 14520 14891 . - . ID=gene-AD11_RS04045;Name=AD11_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04045;old_locus_tag=AD11_0225 NZ_JJLL01000089.1 Protein Homology CDS 14520 14891 . - 0 ID=cds-WP_000043127.1;Parent=gene-AD11_RS04045;Dbxref=GenBank:WP_000043127.1;Name=WP_000043127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233859.1;locus_tag=AD11_RS04045;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000043127.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 14884 15735 . - . ID=gene-AD11_RS04050;Name=AD11_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04050;old_locus_tag=AD11_0226 NZ_JJLL01000089.1 Protein Homology CDS 14884 15735 . - 0 ID=cds-WP_000922506.1;Parent=gene-AD11_RS04050;Dbxref=GenBank:WP_000922506.1;Name=WP_000922506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922508.1;locus_tag=AD11_RS04050;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_000922506.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 16123 17109 . + . ID=gene-AD11_RS04055;Name=AD11_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04055;old_locus_tag=AD11_0227 NZ_JJLL01000089.1 Protein Homology CDS 16123 17109 . + 0 ID=cds-WP_033865174.1;Parent=gene-AD11_RS04055;Dbxref=GenBank:WP_033865174.1;Name=WP_033865174.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001292201.1;locus_tag=AD11_RS04055;product=sigma-54 interaction domain-containing protein;protein_id=WP_033865174.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 17124 17465 . + . ID=gene-AD11_RS04060;Name=AD11_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04060;old_locus_tag=AD11_0228 NZ_JJLL01000089.1 Protein Homology CDS 17124 17465 . + 0 ID=cds-WP_033865175.1;Parent=gene-AD11_RS04060;Dbxref=GenBank:WP_033865175.1;Name=WP_033865175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538312.1;locus_tag=AD11_RS04060;product=flagellar hook-basal body complex protein FliE;protein_id=WP_033865175.1;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 17470 19121 . + . ID=gene-AD11_RS04065;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=pseudogene;locus_tag=AD11_RS04065;old_locus_tag=AD11_0230;pseudo=true NZ_JJLL01000089.1 Protein Homology CDS 17470 19121 . + 0 ID=cds-AD11_RS04065;Parent=gene-AD11_RS04065;Note=frameshifted;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001643010.1;locus_tag=AD11_RS04065;product=flagellar basal-body MS-ring/collar protein FliF;pseudo=true;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 19099 20109 . + . ID=gene-AD11_RS04070;Name=AD11_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04070;old_locus_tag=AD11_0231 NZ_JJLL01000089.1 Protein Homology CDS 19099 20109 . + 0 ID=cds-WP_001293173.1;Parent=gene-AD11_RS04070;Dbxref=GenBank:WP_001293173.1;Name=WP_001293173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293121.1;locus_tag=AD11_RS04070;product=flagellar motor switch protein FliG;protein_id=WP_001293173.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 20113 20823 . + . ID=gene-AD11_RS04075;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AD11_RS04075;old_locus_tag=AD11_0232 NZ_JJLL01000089.1 Protein Homology CDS 20113 20823 . + 0 ID=cds-WP_033865176.1;Parent=gene-AD11_RS04075;Dbxref=GenBank:WP_033865176.1;Name=WP_033865176.1;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521882.1;locus_tag=AD11_RS04075;product=flagellar assembly protein FliH;protein_id=WP_033865176.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 20816 22153 . + . ID=gene-AD11_RS04080;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AD11_RS04080;old_locus_tag=AD11_0233 NZ_JJLL01000089.1 Protein Homology CDS 20816 22153 . + 0 ID=cds-WP_001279403.1;Parent=gene-AD11_RS04080;Dbxref=GenBank:WP_001279403.1;Name=WP_001279403.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001279390.1;locus_tag=AD11_RS04080;product=flagellar protein export ATPase FliI;protein_id=WP_001279403.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 22156 22590 . + . ID=gene-AD11_RS04085;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AD11_RS04085;old_locus_tag=AD11_0234 NZ_JJLL01000089.1 Protein Homology CDS 22156 22590 . + 0 ID=cds-WP_001248924.1;Parent=gene-AD11_RS04085;Dbxref=GenBank:WP_001248924.1;Name=WP_001248924.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248915.1;locus_tag=AD11_RS04085;product=flagellar export protein FliJ;protein_id=WP_001248924.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 22593 22988 . + . ID=gene-AD11_RS04090;Name=AD11_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04090;old_locus_tag=AD11_0235 NZ_JJLL01000089.1 Protein Homology CDS 22593 22988 . + 0 ID=cds-WP_033865177.1;Parent=gene-AD11_RS04090;Dbxref=GenBank:WP_033865177.1;Name=WP_033865177.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001637450.1;locus_tag=AD11_RS04090;product=adenylyltransferase/cytidyltransferase family protein;protein_id=WP_033865177.1;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 23106 25549 . - . ID=gene-AD11_RS04095;Name=AD11_RS04095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04095;pseudo=true NZ_JJLL01000089.1 Protein Homology CDS 23106 25549 . - 0 ID=cds-AD11_RS04095;Parent=gene-AD11_RS04095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001412594.1;locus_tag=AD11_RS04095;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 25728 26657 . - . ID=gene-AD11_RS04100;Name=AD11_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04100;old_locus_tag=AD11_0238 NZ_JJLL01000089.1 Protein Homology CDS 25728 26657 . - 0 ID=cds-WP_000008069.1;Parent=gene-AD11_RS04100;Dbxref=GenBank:WP_000008069.1;Name=WP_000008069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008086.1;locus_tag=AD11_RS04100;product=hypothetical protein;protein_id=WP_000008069.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 26784 27212 . - . ID=gene-AD11_RS04105;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AD11_RS04105;old_locus_tag=AD11_0239 NZ_JJLL01000089.1 Protein Homology CDS 26784 27212 . - 0 ID=cds-WP_000027799.1;Parent=gene-AD11_RS04105;Dbxref=GenBank:WP_000027799.1;Name=WP_000027799.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001329715.1;locus_tag=AD11_RS04105;product=flagellar protein FlgN;protein_id=WP_000027799.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 27225 27503 . - . ID=gene-AD11_RS04110;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AD11_RS04110;old_locus_tag=AD11_0240 NZ_JJLL01000089.1 Protein Homology CDS 27225 27503 . - 0 ID=cds-WP_000705401.1;Parent=gene-AD11_RS04110;Dbxref=GenBank:WP_000705401.1;Name=WP_000705401.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705216.1;locus_tag=AD11_RS04110;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000705401.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 27584 28321 . - . ID=gene-AD11_RS04115;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AD11_RS04115;old_locus_tag=AD11_0241 NZ_JJLL01000089.1 Protein Homology CDS 27584 28321 . - 0 ID=cds-WP_000009752.1;Parent=gene-AD11_RS04115;Dbxref=GenBank:WP_000009752.1;Name=WP_000009752.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233868.1;locus_tag=AD11_RS04115;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000009752.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 28403 28738 . + . ID=gene-AD11_RS04120;Name=AD11_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04120;old_locus_tag=AD11_0242 NZ_JJLL01000089.1 Protein Homology CDS 28403 28738 . + 0 ID=cds-WP_000512952.1;Parent=gene-AD11_RS04120;Dbxref=GenBank:WP_000512952.1;Name=WP_000512952.1;Ontology_term=GO:0071973;gbkey=CDS;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838822.1;locus_tag=AD11_RS04120;product=flagellar basal body protein;protein_id=WP_000512952.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 28741 29172 . + . ID=gene-AD11_RS04125;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AD11_RS04125;old_locus_tag=AD11_0243 NZ_JJLL01000089.1 Protein Homology CDS 28741 29172 . + 0 ID=cds-WP_000010949.1;Parent=gene-AD11_RS04125;Dbxref=GenBank:WP_000010949.1;Name=WP_000010949.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000010944.1;locus_tag=AD11_RS04125;product=flagellar basal body rod protein FlgC;protein_id=WP_000010949.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 29172 29885 . + . ID=gene-AD11_RS04130;Name=AD11_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04130;old_locus_tag=AD11_0244 NZ_JJLL01000089.1 Protein Homology CDS 29172 29885 . + 0 ID=cds-WP_001093673.1;Parent=gene-AD11_RS04130;Dbxref=GenBank:WP_001093673.1;Name=WP_001093673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001508388.1;locus_tag=AD11_RS04130;product=flagellar hook capping FlgD N-terminal domain-containing protein;protein_id=WP_001093673.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 30045 31247 . + . ID=gene-AD11_RS04135;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AD11_RS04135;old_locus_tag=AD11_0245 NZ_JJLL01000089.1 Protein Homology CDS 30045 31247 . + 0 ID=cds-WP_000119513.1;Parent=gene-AD11_RS04135;Dbxref=GenBank:WP_000119513.1;Name=WP_000119513.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904671.1;locus_tag=AD11_RS04135;product=flagellar hook protein FlgE;protein_id=WP_000119513.1;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 31247 31636 . + . ID=gene-AD11_RS04140;Name=AD11_RS04140;end_range=31636,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04140;old_locus_tag=AD11_0246;partial=true;pseudo=true NZ_JJLL01000089.1 Protein Homology CDS 31247 31636 . + 0 ID=cds-AD11_RS04140;Parent=gene-AD11_RS04140;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=31636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375458.1;locus_tag=AD11_RS04140;partial=true;product=flagellar hook-basal body complex protein;pseudo=true;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 31676 32413 . + . ID=gene-AD11_RS04145;Name=AD11_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04145;old_locus_tag=AD11_0247 NZ_JJLL01000089.1 Protein Homology CDS 31676 32413 . + 0 ID=cds-WP_000375468.1;Parent=gene-AD11_RS04145;Dbxref=GenBank:WP_000375468.1;Name=WP_000375468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375458.1;locus_tag=AD11_RS04145;product=flagellar basal body rod protein FlgF;protein_id=WP_000375468.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 32492 33277 . + . ID=gene-AD11_RS04150;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AD11_RS04150;old_locus_tag=AD11_0248 NZ_JJLL01000089.1 Protein Homology CDS 32492 33277 . + 0 ID=cds-WP_000990538.1;Parent=gene-AD11_RS04150;Dbxref=GenBank:WP_000990538.1;Name=WP_000990538.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003838810.1;locus_tag=AD11_RS04150;product=flagellar basal-body rod protein FlgG;protein_id=WP_000990538.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 33481 34146 . + . ID=gene-AD11_RS04155;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AD11_RS04155;old_locus_tag=AD11_0249 NZ_JJLL01000089.1 Protein Homology CDS 33481 34146 . + 0 ID=cds-WP_000800868.1;Parent=gene-AD11_RS04155;Dbxref=GenBank:WP_000800868.1;Name=WP_000800868.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211429.1;locus_tag=AD11_RS04155;product=flagellar basal body L-ring protein FlgH;protein_id=WP_000800868.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 34161 35261 . + . ID=gene-AD11_RS04160;Name=AD11_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04160;old_locus_tag=AD11_0250 NZ_JJLL01000089.1 Protein Homology CDS 34161 35261 . + 0 ID=cds-WP_001181895.1;Parent=gene-AD11_RS04160;Dbxref=GenBank:WP_001181895.1;Name=WP_001181895.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181884.1;locus_tag=AD11_RS04160;product=flagellar basal body P-ring protein FlgI;protein_id=WP_001181895.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 35261 35560 . + . ID=gene-AD11_RS04165;Name=AD11_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04165;old_locus_tag=AD11_0251 NZ_JJLL01000089.1 Protein Homology CDS 35261 35560 . + 0 ID=cds-WP_000700041.1;Parent=gene-AD11_RS04165;Dbxref=GenBank:WP_000700041.1;Name=WP_000700041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000867283.1;locus_tag=AD11_RS04165;product=rod-binding protein;protein_id=WP_000700041.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 35743 37119 . + . ID=gene-AD11_RS04170;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AD11_RS04170;old_locus_tag=AD11_0252 NZ_JJLL01000089.1 Protein Homology CDS 35743 37119 . + 0 ID=cds-WP_000367226.1;Parent=gene-AD11_RS04170;Dbxref=GenBank:WP_000367226.1;Name=WP_000367226.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367241.1;locus_tag=AD11_RS04170;product=flagellar hook-associated protein FlgK;protein_id=WP_000367226.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 37134 38063 . + . ID=gene-AD11_RS04175;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AD11_RS04175;old_locus_tag=AD11_0253 NZ_JJLL01000089.1 Protein Homology CDS 37134 38063 . + 0 ID=cds-WP_032083750.1;Parent=gene-AD11_RS04175;Dbxref=GenBank:WP_032083750.1;Name=WP_032083750.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219239.1;locus_tag=AD11_RS04175;product=flagellar hook-associated protein FlgL;protein_id=WP_032083750.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 38080 39057 . + . ID=gene-AD11_RS04180;Name=AD11_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04180;old_locus_tag=AD11_0254 NZ_JJLL01000089.1 Protein Homology CDS 38080 39057 . + 0 ID=cds-WP_001752087.1;Parent=gene-AD11_RS04180;Dbxref=GenBank:WP_001752087.1;Name=WP_001752087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195949.1;locus_tag=AD11_RS04180;product=hypothetical protein;protein_id=WP_001752087.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 39112 39954 . - . ID=gene-AD11_RS04185;Name=AD11_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04185;old_locus_tag=AD11_0255 NZ_JJLL01000089.1 Protein Homology CDS 39112 39954 . - 0 ID=cds-WP_033866280.1;Parent=gene-AD11_RS04185;Dbxref=GenBank:WP_033866280.1;Name=WP_033866280.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022370.1;locus_tag=AD11_RS04185;product=transcriptional regulator;protein_id=WP_033866280.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 40440 41354 . + . ID=gene-AD11_RS04190;Name=lafA;gbkey=Gene;gene=lafA;gene_biotype=protein_coding;locus_tag=AD11_RS04190;old_locus_tag=AD11_0256 NZ_JJLL01000089.1 Protein Homology CDS 40440 41354 . + 0 ID=cds-WP_032083753.1;Parent=gene-AD11_RS04190;Dbxref=GenBank:WP_032083753.1;Name=WP_032083753.1;gbkey=CDS;gene=lafA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001570969.1;locus_tag=AD11_RS04190;product=lateral flagellin LafA;protein_id=WP_032083753.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 41645 42961 . + . ID=gene-AD11_RS04195;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AD11_RS04195;old_locus_tag=AD11_0257 NZ_JJLL01000089.1 Protein Homology CDS 41645 42961 . + 0 ID=cds-WP_032083754.1;Parent=gene-AD11_RS04195;Dbxref=GenBank:WP_032083754.1;Name=WP_032083754.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000609688.1;locus_tag=AD11_RS04195;product=flagellar filament capping protein FliD;protein_id=WP_032083754.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 42984 43376 . + . ID=gene-AD11_RS04200;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AD11_RS04200;old_locus_tag=AD11_0258 NZ_JJLL01000089.1 Protein Homology CDS 42984 43376 . + 0 ID=cds-WP_000285319.1;Parent=gene-AD11_RS04200;Dbxref=GenBank:WP_000285319.1;Name=WP_000285319.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285320.1;locus_tag=AD11_RS04200;product=flagellar export chaperone FliS;protein_id=WP_000285319.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 43381 43692 . + . ID=gene-AD11_RS04205;Name=AD11_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04205;old_locus_tag=AD11_0259 NZ_JJLL01000089.1 Protein Homology CDS 43381 43692 . + 0 ID=cds-WP_000414993.1;Parent=gene-AD11_RS04205;Dbxref=GenBank:WP_000414993.1;Name=WP_000414993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000414995.1;locus_tag=AD11_RS04205;product=hypothetical protein;protein_id=WP_000414993.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 43689 44750 . + . ID=gene-AD11_RS04210;Name=AD11_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04210;old_locus_tag=AD11_0260 NZ_JJLL01000089.1 Protein Homology CDS 43689 44750 . + 0 ID=cds-WP_001067465.1;Parent=gene-AD11_RS04210;Dbxref=GenBank:WP_001067465.1;Name=WP_001067465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001067462.1;locus_tag=AD11_RS04210;product=flagellar hook-length control protein FliK;protein_id=WP_001067465.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 44758 45225 . + . ID=gene-AD11_RS04215;Name=AD11_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04215;old_locus_tag=AD11_0261 NZ_JJLL01000089.1 Protein Homology CDS 44758 45225 . + 0 ID=cds-WP_000725257.1;Parent=gene-AD11_RS04215;Dbxref=GenBank:WP_000725257.1;Name=WP_000725257.1;Ontology_term=GO:0006935,GO:0071978,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521900.1;locus_tag=AD11_RS04215;product=flagellar basal body-associated FliL family protein;protein_id=WP_000725257.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 45245 45961 . + . ID=gene-AD11_RS04220;Name=AD11_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04220;old_locus_tag=AD11_0262 NZ_JJLL01000089.1 Protein Homology CDS 45245 45961 . + 0 ID=cds-WP_000938723.1;Parent=gene-AD11_RS04220;Dbxref=GenBank:WP_000938723.1;Name=WP_000938723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000938732.1;locus_tag=AD11_RS04220;product=FliA/WhiG family RNA polymerase sigma factor;protein_id=WP_000938723.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 45974 46837 . + . ID=gene-AD11_RS04225;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AD11_RS04225;old_locus_tag=AD11_0263 NZ_JJLL01000089.1 Protein Homology CDS 45974 46837 . + 0 ID=cds-WP_001169518.1;Parent=gene-AD11_RS04225;Dbxref=GenBank:WP_001169518.1;Name=WP_001169518.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169515.1;locus_tag=AD11_RS04225;product=flagellar motor stator protein MotA;protein_id=WP_001169518.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 46840 47763 . + . ID=gene-AD11_RS04230;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AD11_RS04230;old_locus_tag=AD11_0264 NZ_JJLL01000089.1 Protein Homology CDS 46840 47763 . + 0 ID=cds-WP_001232547.1;Parent=gene-AD11_RS04230;Dbxref=GenBank:WP_001232547.1;Name=WP_001232547.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521902.1;locus_tag=AD11_RS04230;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_001232547.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 47834 48889 . + . ID=gene-AD11_RS04235;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AD11_RS04235;old_locus_tag=AD11_0265 NZ_JJLL01000089.1 Protein Homology CDS 47834 48889 . + 0 ID=cds-WP_001226164.1;Parent=gene-AD11_RS04235;Dbxref=GenBank:WP_001226164.1;Name=WP_001226164.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AD11_RS04235;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 48941 49234 . + . ID=gene-AD11_RS04240;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;locus_tag=AD11_RS04240;old_locus_tag=AD11_0266 NZ_JJLL01000089.1 Protein Homology CDS 48941 49234 . + 0 ID=cds-WP_000554757.1;Parent=gene-AD11_RS04240;Dbxref=GenBank:WP_000554757.1;Name=WP_000554757.1;gbkey=CDS;gene=yafN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308286.1;locus_tag=AD11_RS04240;product=type I toxin-antitoxin system antitoxin YafN;protein_id=WP_000554757.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 49237 49635 . + . ID=gene-AD11_RS04245;Name=yafO;gbkey=Gene;gene=yafO;gene_biotype=protein_coding;locus_tag=AD11_RS04245;old_locus_tag=AD11_0267 NZ_JJLL01000089.1 Protein Homology CDS 49237 49635 . + 0 ID=cds-WP_001263493.1;Parent=gene-AD11_RS04245;Dbxref=GenBank:WP_001263493.1;Name=WP_001263493.1;gbkey=CDS;gene=yafO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706233.1;locus_tag=AD11_RS04245;product=type II toxin-antitoxin system mRNA interferase toxin YafO;protein_id=WP_001263493.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 49645 50097 . + . ID=gene-AD11_RS04250;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;locus_tag=AD11_RS04250;old_locus_tag=AD11_0268 NZ_JJLL01000089.1 Protein Homology CDS 49645 50097 . + 0 ID=cds-WP_001509554.1;Parent=gene-AD11_RS04250;Dbxref=GenBank:WP_001509554.1;Name=WP_001509554.1;gbkey=CDS;gene=yafP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706234.1;locus_tag=AD11_RS04250;product=GNAT family N-acetyltransferase;protein_id=WP_001509554.1;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 50343 50546 . + . ID=gene-AD11_RS04255;Name=AD11_RS04255;end_range=50546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04255;old_locus_tag=AD11_0269;partial=true;pseudo=true NZ_JJLL01000089.1 Protein Homology CDS 50343 50546 . + 0 ID=cds-AD11_RS04255;Parent=gene-AD11_RS04255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=50546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706235.2;locus_tag=AD11_RS04255;partial=true;product=RtcB family protein;pseudo=true;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 50560 51066 . + . ID=gene-AD11_RS04260;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=pseudogene;locus_tag=AD11_RS04260;old_locus_tag=AD11_0270;partial=true;pseudo=true;start_range=.,50560 NZ_JJLL01000089.1 Protein Homology CDS 50560 51066 . + 0 ID=cds-AD11_RS04260;Parent=gene-AD11_RS04260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AD11_RS04260;partial=true;product=peptide chain release factor H;pseudo=true;start_range=.,50560;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 51123 52580 . - . ID=gene-AD11_RS04265;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AD11_RS04265;old_locus_tag=AD11_0271 NZ_JJLL01000089.1 Protein Homology CDS 51123 52580 . - 0 ID=cds-WP_001293003.1;Parent=gene-AD11_RS04265;Dbxref=GenBank:WP_001293003.1;Name=WP_001293003.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=AD11_RS04265;product=cytosol nonspecific dipeptidase;protein_id=WP_001293003.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 52841 53299 . + . ID=gene-AD11_RS04270;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AD11_RS04270;old_locus_tag=AD11_0272 NZ_JJLL01000089.1 Protein Homology CDS 52841 53299 . + 0 ID=cds-WP_001291990.1;Parent=gene-AD11_RS04270;Dbxref=GenBank:WP_001291990.1;Name=WP_001291990.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AD11_RS04270;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 53391 54635 . + . ID=gene-AD11_RS04275;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AD11_RS04275;old_locus_tag=AD11_0273 NZ_JJLL01000089.1 Protein Homology CDS 53391 54635 . + 0 ID=cds-WP_000189541.1;Parent=gene-AD11_RS04275;Dbxref=GenBank:WP_000189541.1;Name=WP_000189541.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414774.1;locus_tag=AD11_RS04275;product=esterase FrsA;protein_id=WP_000189541.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 54693 55094 . + . ID=gene-AD11_RS04280;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AD11_RS04280;old_locus_tag=AD11_0274 NZ_JJLL01000089.1 Protein Homology CDS 54693 55094 . + 0 ID=cds-WP_000174677.1;Parent=gene-AD11_RS04280;Dbxref=GenBank:WP_000174677.1;Name=WP_000174677.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AD11_RS04280;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 55133 56188 . - . ID=gene-AD11_RS04285;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AD11_RS04285;old_locus_tag=AD11_0275 NZ_JJLL01000089.1 Protein Homology CDS 55133 56188 . - 0 ID=cds-WP_000749863.1;Parent=gene-AD11_RS04285;Dbxref=GenBank:WP_000749863.1;Name=WP_000749863.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414776.1;locus_tag=AD11_RS04285;product=phosphoporin PhoE;protein_id=WP_000749863.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 56476 57579 . + . ID=gene-AD11_RS04290;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AD11_RS04290;old_locus_tag=AD11_0276 NZ_JJLL01000089.1 Protein Homology CDS 56476 57579 . + 0 ID=cds-WP_001285288.1;Parent=gene-AD11_RS04290;Dbxref=GenBank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AD11_RS04290;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 57591 58844 . + . ID=gene-AD11_RS04295;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AD11_RS04295;old_locus_tag=AD11_0277 NZ_JJLL01000089.1 Protein Homology CDS 57591 58844 . + 0 ID=cds-WP_000893278.1;Parent=gene-AD11_RS04295;Dbxref=GenBank:WP_000893278.1;Name=WP_000893278.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AD11_RS04295;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893278.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 58959 59034 . + . ID=gene-AD11_RS04300;Name=AD11_RS04300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS04300;old_locus_tag=AD11_0278 NZ_JJLL01000089.1 tRNAscan-SE tRNA 58959 59034 . + . ID=rna-AD11_RS04300;Parent=gene-AD11_RS04300;anticodon=(pos:58992..58994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS04300;product=tRNA-Thr NZ_JJLL01000089.1 tRNAscan-SE exon 58959 59034 . + . ID=exon-AD11_RS04300-1;Parent=rna-AD11_RS04300;anticodon=(pos:58992..58994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS04300;product=tRNA-Thr NZ_JJLL01000089.1 RefSeq gene 59360 59941 . + . ID=gene-AD11_RS04305;Name=AD11_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04305;old_locus_tag=AD11_0279 NZ_JJLL01000089.1 Protein Homology CDS 59360 59941 . + 0 ID=cds-WP_001310565.1;Parent=gene-AD11_RS04305;Dbxref=GenBank:WP_001310565.1;Name=WP_001310565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001310565.1;locus_tag=AD11_RS04305;product=hypothetical protein;protein_id=WP_001310565.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 60028 61659 . - . ID=gene-AD11_RS04310;Name=AD11_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04310 NZ_JJLL01000089.1 Protein Homology CDS 60028 61659 . - 0 ID=cds-WP_001310566.1;Parent=gene-AD11_RS04310;Dbxref=GenBank:WP_001310566.1;Name=WP_001310566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258742.1;locus_tag=AD11_RS04310;product=hypothetical protein;protein_id=WP_001310566.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 62352 62579 . + . ID=gene-AD11_RS04315;Name=AD11_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04315 NZ_JJLL01000089.1 Protein Homology CDS 62352 62579 . + 0 ID=cds-WP_000270169.1;Parent=gene-AD11_RS04315;Dbxref=GenBank:WP_000270169.1;Name=WP_000270169.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000270169.1;locus_tag=AD11_RS04315;product=helix-turn-helix transcriptional regulator;protein_id=WP_000270169.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 62791 62940 . + . ID=gene-AD11_RS32435;Name=AD11_RS32435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32435 NZ_JJLL01000089.1 Protein Homology CDS 62791 62940 . + 0 ID=cds-WP_001333414.1;Parent=gene-AD11_RS32435;Dbxref=GenBank:WP_001333414.1;Name=WP_001333414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.6;locus_tag=AD11_RS32435;product=DUF3987 domain-containing protein;protein_id=WP_001333414.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 63153 64586 . + . ID=gene-AD11_RS04320;Name=AD11_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04320;old_locus_tag=AD11_0282 NZ_JJLL01000089.1 Protein Homology CDS 63153 64586 . + 0 ID=cds-WP_000114377.1;Parent=gene-AD11_RS04320;Dbxref=GenBank:WP_000114377.1;Name=WP_000114377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309330.1;locus_tag=AD11_RS04320;product=YfjI family protein;protein_id=WP_000114377.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 65445 66008 . + . ID=gene-AD11_RS04325;Name=AD11_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04325;old_locus_tag=AD11_0283 NZ_JJLL01000089.1 Protein Homology CDS 65445 66008 . + 0 ID=cds-WP_033865183.1;Parent=gene-AD11_RS04325;Dbxref=GenBank:WP_033865183.1;Name=WP_033865183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309331.1;locus_tag=AD11_RS04325;product=inovirus-type Gp2 protein;protein_id=WP_033865183.1;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 66334 67669 . - . ID=gene-AD11_RS04330;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=pseudogene;locus_tag=AD11_RS04330;old_locus_tag=AD11_0284;pseudo=true NZ_JJLL01000089.1 Protein Homology CDS 66334 67669 . - 0 ID=cds-AD11_RS04330;Parent=gene-AD11_RS04330;Note=frameshifted;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001609588.1;locus_tag=AD11_RS04330;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 68160 68282 . - . ID=gene-AD11_RS31380;Name=AD11_RS31380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31380;old_locus_tag=AD11_0286;partial=true;pseudo=true;start_range=.,68160 NZ_JJLL01000089.1 Protein Homology CDS 68160 68282 . - 0 ID=cds-AD11_RS31380;Parent=gene-AD11_RS31380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152817.1;locus_tag=AD11_RS31380;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,68160;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 68361 68591 . - . ID=gene-AD11_RS04340;Name=AD11_RS04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04340;partial=true;pseudo=true;start_range=.,68361 NZ_JJLL01000089.1 Protein Homology CDS 68361 68591 . - 0 ID=cds-AD11_RS04340;Parent=gene-AD11_RS04340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611788.1;locus_tag=AD11_RS04340;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,68361;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 68735 69844 . - . ID=gene-AD11_RS04345;Name=AD11_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04345;old_locus_tag=AD11_0288 NZ_JJLL01000089.1 Protein Homology CDS 68735 69844 . - 0 ID=cds-WP_016243364.1;Parent=gene-AD11_RS04345;Dbxref=GenBank:WP_016243364.1;Name=WP_016243364.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243364.1;locus_tag=AD11_RS04345;product=ABC transporter ATP-binding protein;protein_id=WP_016243364.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 70201 71433 . + . ID=gene-AD11_RS04355;Name=AD11_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04355;old_locus_tag=AD11_0290 NZ_JJLL01000089.1 Protein Homology CDS 70201 71433 . + 0 ID=cds-WP_000742442.1;Parent=gene-AD11_RS04355;Dbxref=GenBank:WP_000742442.1;Name=WP_000742442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225470.1;locus_tag=AD11_RS04355;product=maltodextrin ABC transporter substrate-binding protein;protein_id=WP_000742442.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 71496 72803 . + . ID=gene-AD11_RS04360;Name=AD11_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04360;old_locus_tag=AD11_0291 NZ_JJLL01000089.1 Protein Homology CDS 71496 72803 . + 0 ID=cds-WP_000022200.1;Parent=gene-AD11_RS04360;Dbxref=GenBank:WP_000022200.1;Name=WP_000022200.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225471.1;locus_tag=AD11_RS04360;product=carbohydrate ABC transporter permease;protein_id=WP_000022200.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 72814 73665 . + . ID=gene-AD11_RS04365;Name=AD11_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04365;old_locus_tag=AD11_0292 NZ_JJLL01000089.1 Protein Homology CDS 72814 73665 . + 0 ID=cds-WP_000079398.1;Parent=gene-AD11_RS04365;Dbxref=GenBank:WP_000079398.1;Name=WP_000079398.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225472.1;locus_tag=AD11_RS04365;product=sugar ABC transporter permease;protein_id=WP_000079398.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 73670 74872 . + . ID=gene-AD11_RS04370;Name=AD11_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04370;old_locus_tag=AD11_0293 NZ_JJLL01000089.1 Protein Homology CDS 73670 74872 . + 0 ID=cds-WP_000819837.1;Parent=gene-AD11_RS04370;Dbxref=GenBank:WP_000819837.1;Name=WP_000819837.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225473.1;locus_tag=AD11_RS04370;product=glycoside hydrolase family 53 protein;protein_id=WP_000819837.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 74904 76961 . + . ID=gene-AD11_RS04375;Name=AD11_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04375;old_locus_tag=AD11_0294 NZ_JJLL01000089.1 Protein Homology CDS 74904 76961 . + 0 ID=cds-WP_001031684.1;Parent=gene-AD11_RS04375;Dbxref=GenBank:WP_001031684.1;Name=WP_001031684.1;Ontology_term=GO:0006012,GO:0004565,GO:0046872,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA,metal ion binding|0046872||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225474.1;locus_tag=AD11_RS04375;product=beta-galactosidase;protein_id=WP_001031684.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 77025 77339 . + . ID=gene-AD11_RS04380;Name=AD11_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04380;old_locus_tag=AD11_0295 NZ_JJLL01000089.1 Protein Homology CDS 77025 77339 . + 0 ID=cds-WP_000254058.1;Parent=gene-AD11_RS04380;Dbxref=GenBank:WP_000254058.1;Name=WP_000254058.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225475.1;locus_tag=AD11_RS04380;product=glucose PTS transporter subunit EIIB;protein_id=WP_000254058.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 77476 78747 . - . ID=gene-AD11_RS04385;Name=AD11_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04385;old_locus_tag=AD11_0296 NZ_JJLL01000089.1 Protein Homology CDS 77476 78747 . - 0 ID=cds-WP_001098396.1;Parent=gene-AD11_RS04385;Dbxref=GenBank:WP_001098396.1;Name=WP_001098396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177240.1;locus_tag=AD11_RS04385;product=maltoporin;protein_id=WP_001098396.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 79018 80088 . + . ID=gene-AD11_RS04390;Name=AD11_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04390;old_locus_tag=AD11_0297 NZ_JJLL01000089.1 Protein Homology CDS 79018 80088 . + 0 ID=cds-WP_000837747.1;Parent=gene-AD11_RS04390;Dbxref=GenBank:WP_000837747.1;Name=WP_000837747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225478.1;locus_tag=AD11_RS04390;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000837747.1;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 80421 80934 . + . ID=gene-AD11_RS30490;Name=AD11_RS30490;end_range=80934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30490;partial=true;pseudo=true NZ_JJLL01000089.1 Protein Homology CDS 80421 80934 . + 0 ID=cds-AD11_RS30490;Parent=gene-AD11_RS30490;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=80934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AD11_RS30490;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 80932 81486 . - . ID=gene-AD11_RS04395;Name=AD11_RS04395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04395;old_locus_tag=AD11_0298;partial=true;pseudo=true;start_range=.,80932 NZ_JJLL01000089.1 Protein Homology CDS 80932 81486 . - 0 ID=cds-AD11_RS04395;Parent=gene-AD11_RS04395;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000856948.1;locus_tag=AD11_RS04395;partial=true;product=TonB-dependent receptor plug domain-containing protein;pseudo=true;start_range=.,80932;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 81915 82787 . + . ID=gene-AD11_RS04400;Name=AD11_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04400;old_locus_tag=AD11_0299 NZ_JJLL01000089.1 Protein Homology CDS 81915 82787 . + 0 ID=cds-WP_001069719.1;Parent=gene-AD11_RS04400;Dbxref=GenBank:WP_001069719.1;Name=WP_001069719.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AD11_RS04400;product=GTPase family protein;protein_id=WP_001069719.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 83081 86200 . + . ID=gene-AD11_RS04405;Name=agn43;gbkey=Gene;gene=agn43;gene_biotype=protein_coding;gene_synonym=flu;locus_tag=AD11_RS04405;old_locus_tag=AD11_0300 NZ_JJLL01000089.1 Protein Homology CDS 83081 86200 . + 0 ID=cds-WP_033866282.1;Parent=gene-AD11_RS04405;Dbxref=GenBank:WP_033866282.1;Name=WP_033866282.1;gbkey=CDS;gene=agn43;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026164.1;locus_tag=AD11_RS04405;product=autotransporter adhesin Ag43;protein_id=WP_033866282.1;transl_table=11 NZ_JJLL01000089.1 RefSeq gene 86539 87357 . + . ID=gene-AD11_RS04410;Name=AD11_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04410;old_locus_tag=AD11_0301 NZ_JJLL01000089.1 Protein Homology CDS 86539 87357 . + 0 ID=cds-WP_001241366.1;Parent=gene-AD11_RS04410;Dbxref=GenBank:WP_001241366.1;Name=WP_001241366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708768.1;locus_tag=AD11_RS04410;product=DUF932 domain-containing protein;protein_id=WP_001241366.1;transl_table=11 NZ_JJLL01000089.1 RefSeq pseudogene 87439 87677 . + . ID=gene-AD11_RS04415;Name=AD11_RS04415;end_range=87677,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04415;old_locus_tag=AD11_0302;partial=true;pseudo=true NZ_JJLL01000089.1 Protein Homology CDS 87439 87677 . + 0 ID=cds-AD11_RS04415;Parent=gene-AD11_RS04415;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=87677,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310829.1;locus_tag=AD11_RS04415;partial=true;product=antirestriction protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000090.1 1 11117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000090.1 RefSeq region 1 11117 . + . ID=NZ_JJLL01000090.1:1..11117;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000090.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS04420;Name=AD11_RS04420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04420;old_locus_tag=AD11_0303;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000090.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS04420;Parent=gene-AD11_RS04420;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS04420;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 724 1017 . - . ID=gene-AD11_RS04425;Name=AD11_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04425;old_locus_tag=AD11_0304 NZ_JJLL01000090.1 Protein Homology CDS 724 1017 . - 0 ID=cds-WP_001309172.1;Parent=gene-AD11_RS04425;Dbxref=GenBank:WP_001309172.1;Name=WP_001309172.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230781.1;locus_tag=AD11_RS04425;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_001309172.1;transl_table=11 NZ_JJLL01000090.1 RefSeq pseudogene 1321 1419 . - . ID=gene-AD11_RS28440;Name=AD11_RS28440;end_range=1419,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28440;partial=true;pseudo=true NZ_JJLL01000090.1 Protein Homology CDS 1321 1419 . - 0 ID=cds-AD11_RS28440;Parent=gene-AD11_RS28440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=1419,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS28440;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000090.1 RefSeq pseudogene 1419 1623 . - . ID=gene-AD11_RS32440;Name=AD11_RS32440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32440;partial=true;pseudo=true;start_range=.,1419 NZ_JJLL01000090.1 Protein Homology CDS 1419 1623 . - 0 ID=cds-AD11_RS32440;Parent=gene-AD11_RS32440;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS32440;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1419;transl_table=11 NZ_JJLL01000090.1 RefSeq pseudogene 1661 1732 . + . ID=gene-AD11_RS31390;Name=AD11_RS31390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31390;partial=true;pseudo=true;start_range=.,1661 NZ_JJLL01000090.1 Protein Homology CDS 1661 1732 . + 0 ID=cds-AD11_RS31390;Parent=gene-AD11_RS31390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013446.6;locus_tag=AD11_RS31390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1661;transl_table=11 NZ_JJLL01000090.1 RefSeq pseudogene 1743 2440 . - . ID=gene-AD11_RS27560;Name=AD11_RS27560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27560;pseudo=true NZ_JJLL01000090.1 Protein Homology CDS 1743 2440 . - 0 ID=cds-AD11_RS27560;Parent=gene-AD11_RS27560;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AD11_RS27560;product=IS1-like element IS1F family transposase;pseudo=true;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 2527 2595 . - . ID=gene-AD11_RS32445;Name=ykiE;gbkey=Gene;gene=ykiE;gene_biotype=protein_coding;locus_tag=AD11_RS32445 NZ_JJLL01000090.1 Protein Homology CDS 2527 2595 . - 0 ID=cds-WP_211180522.1;Parent=gene-AD11_RS32445;Dbxref=GenBank:WP_211180522.1;Name=WP_211180522.1;gbkey=CDS;gene=ykiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051215.1;locus_tag=AD11_RS32445;product=protein YkiE;protein_id=WP_211180522.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 2732 3253 . + . ID=gene-AD11_RS04450;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=AD11_RS04450;old_locus_tag=AD11_0307 NZ_JJLL01000090.1 Protein Homology CDS 2732 3253 . + 0 ID=cds-WP_001283626.1;Parent=gene-AD11_RS04450;Dbxref=GenBank:WP_001283626.1;Name=WP_001283626.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AD11_RS04450;product=RNA polymerase sigma factor FecI;protein_id=WP_001283626.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 3250 4203 . + . ID=gene-AD11_RS04455;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AD11_RS04455;old_locus_tag=AD11_0308 NZ_JJLL01000090.1 Protein Homology CDS 3250 4203 . + 0 ID=cds-WP_001068910.1;Parent=gene-AD11_RS04455;Dbxref=GenBank:WP_001068910.1;Name=WP_001068910.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AD11_RS04455;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_001068910.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 4290 6614 . + . ID=gene-AD11_RS04460;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AD11_RS04460;old_locus_tag=AD11_0309 NZ_JJLL01000090.1 Protein Homology CDS 4290 6614 . + 0 ID=cds-WP_000188283.1;Parent=gene-AD11_RS04460;Dbxref=GenBank:WP_000188283.1;Name=WP_000188283.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AD11_RS04460;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_000188283.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 6659 7561 . + . ID=gene-AD11_RS04465;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AD11_RS04465;old_locus_tag=AD11_0310 NZ_JJLL01000090.1 Protein Homology CDS 6659 7561 . + 0 ID=cds-WP_000879160.1;Parent=gene-AD11_RS04465;Dbxref=GenBank:WP_000879160.1;Name=WP_000879160.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AD11_RS04465;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879160.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 7558 8556 . + . ID=gene-AD11_RS04470;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AD11_RS04470;old_locus_tag=AD11_0311 NZ_JJLL01000090.1 Protein Homology CDS 7558 8556 . + 0 ID=cds-WP_000125187.1;Parent=gene-AD11_RS04470;Dbxref=GenBank:WP_000125187.1;Name=WP_000125187.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AD11_RS04470;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_000125187.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 8553 9509 . + . ID=gene-AD11_RS04475;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AD11_RS04475;old_locus_tag=AD11_0312 NZ_JJLL01000090.1 Protein Homology CDS 8553 9509 . + 0 ID=cds-WP_033866284.1;Parent=gene-AD11_RS04475;Dbxref=GenBank:WP_033866284.1;Name=WP_033866284.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AD11_RS04475;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_033866284.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 9510 10277 . + . ID=gene-AD11_RS04480;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AD11_RS04480;old_locus_tag=AD11_0314 NZ_JJLL01000090.1 Protein Homology CDS 9510 10277 . + 0 ID=cds-WP_000175457.1;Parent=gene-AD11_RS04480;Dbxref=GenBank:WP_000175457.1;Name=WP_000175457.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AD11_RS04480;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_000175457.1;transl_table=11 NZ_JJLL01000090.1 RefSeq gene 10826 11117 . - . ID=gene-AD11_RS04485;Name=AD11_RS04485;end_range=11117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04485;old_locus_tag=AD11_0315;partial=true NZ_JJLL01000090.1 Protein Homology CDS 10826 11117 . - 1 ID=cds-WP_001405260.1-2;Parent=gene-AD11_RS04485;Dbxref=GenBank:WP_001405260.1;Name=WP_001405260.1;Ontology_term=GO:0005524;end_range=11117,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243248.1;locus_tag=AD11_RS04485;partial=true;product=ATP-binding protein;protein_id=WP_001405260.1;transl_table=11 ##sequence-region NZ_JJLL01000091.1 1 8027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000091.1 RefSeq region 1 8027 . + . ID=NZ_JJLL01000091.1:1..8027;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000091.1 RefSeq pseudogene 1 832 . + . ID=gene-AD11_RS04490;Name=AD11_RS04490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04490;old_locus_tag=AD11_0316;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000091.1 Protein Homology CDS 1 832 . + 1 ID=cds-AD11_RS04490;Parent=gene-AD11_RS04490;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS04490;partial=true;product=IS66-like element ISEc22 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000091.1 RefSeq pseudogene 871 1056 . - . ID=gene-AD11_RS31400;Name=AD11_RS31400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31400;partial=true;pseudo=true;start_range=.,871 NZ_JJLL01000091.1 Protein Homology CDS 871 1056 . - 0 ID=cds-AD11_RS31400;Parent=gene-AD11_RS31400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708754.1;locus_tag=AD11_RS31400;partial=true;product=putative zinc ribbon protein;pseudo=true;start_range=.,871;transl_table=11 NZ_JJLL01000091.1 RefSeq gene 1053 1436 . - . ID=gene-AD11_RS04500;Name=AD11_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04500;old_locus_tag=AD11_0317 NZ_JJLL01000091.1 Protein Homology CDS 1053 1436 . - 0 ID=cds-WP_000271011.1;Parent=gene-AD11_RS04500;Dbxref=GenBank:WP_000271011.1;Name=WP_000271011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708755.1;locus_tag=AD11_RS04500;product=putative zinc ribbon protein;protein_id=WP_000271011.1;transl_table=11 NZ_JJLL01000091.1 RefSeq gene 1603 2172 . - . ID=gene-AD11_RS04505;Name=AD11_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04505;old_locus_tag=AD11_0318 NZ_JJLL01000091.1 Protein Homology CDS 1603 2172 . - 0 ID=cds-WP_000221523.1;Parent=gene-AD11_RS04505;Dbxref=GenBank:WP_000221523.1;Name=WP_000221523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238748.1;locus_tag=AD11_RS04505;product=inovirus Gp2 family protein;protein_id=WP_000221523.1;transl_table=11 NZ_JJLL01000091.1 RefSeq gene 2371 2568 . + . ID=gene-AD11_RS32450;Name=AD11_RS32450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32450;old_locus_tag=AD11_0319 NZ_JJLL01000091.1 Protein Homology CDS 2371 2568 . + 0 ID=cds-WP_032144956.1;Parent=gene-AD11_RS32450;Dbxref=GenBank:WP_032144956.1;Name=WP_032144956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001547002.1;locus_tag=AD11_RS32450;product=hypothetical protein;protein_id=WP_032144956.1;transl_table=11 NZ_JJLL01000091.1 RefSeq pseudogene 2901 3080 . - . ID=gene-AD11_RS04520;Name=hha;end_range=3080,.;gbkey=Gene;gene=hha;gene_biotype=pseudogene;locus_tag=AD11_RS04520;old_locus_tag=AD11_0320;partial=true;pseudo=true NZ_JJLL01000091.1 Protein Homology CDS 2901 3080 . - 0 ID=cds-AD11_RS04520;Parent=gene-AD11_RS04520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3080,.;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000453335.1;locus_tag=AD11_RS04520;partial=true;product=hemolysin expression modulator Hha;pseudo=true;transl_table=11 NZ_JJLL01000091.1 RefSeq gene 3998 4204 . + . ID=gene-AD11_RS04525;Name=AD11_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04525;old_locus_tag=AD11_0323 NZ_JJLL01000091.1 Protein Homology CDS 3998 4204 . + 0 ID=cds-WP_001095916.1;Parent=gene-AD11_RS04525;Dbxref=GenBank:WP_001095916.1;Name=WP_001095916.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708761.1;locus_tag=AD11_RS04525;product=helix-turn-helix transcriptional regulator;protein_id=WP_001095916.1;transl_table=11 NZ_JJLL01000091.1 RefSeq gene 4290 4862 . + . ID=gene-AD11_RS04530;Name=AD11_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04530;old_locus_tag=AD11_0325 NZ_JJLL01000091.1 Protein Homology CDS 4290 4862 . + 0 ID=cds-WP_001296389.1;Parent=gene-AD11_RS04530;Dbxref=GenBank:WP_001296389.1;Name=WP_001296389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708762.1;locus_tag=AD11_RS04530;product=hypothetical protein;protein_id=WP_001296389.1;transl_table=11 NZ_JJLL01000091.1 RefSeq gene 4983 6473 . - . ID=gene-AD11_RS04535;Name=AD11_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04535;old_locus_tag=AD11_0326 NZ_JJLL01000091.1 Protein Homology CDS 4983 6473 . - 0 ID=cds-WP_001296390.1;Parent=gene-AD11_RS04535;Dbxref=GenBank:WP_001296390.1;Name=WP_001296390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513421.1;locus_tag=AD11_RS04535;product=YfjI family protein;protein_id=WP_001296390.1;transl_table=11 NZ_JJLL01000091.1 RefSeq gene 7805 8027 . + . ID=gene-AD11_RS04545;Name=AD11_RS04545;end_range=8027,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04545;old_locus_tag=AD11_0328;partial=true NZ_JJLL01000091.1 Protein Homology CDS 7805 8027 . + 0 ID=cds-WP_001069700.1;Parent=gene-AD11_RS04545;Dbxref=GenBank:WP_001069700.1;Name=WP_001069700.1;Ontology_term=GO:0005525;end_range=8027,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AD11_RS04545;partial=true;product=GTPase;protein_id=WP_001069700.1;transl_table=11 ##sequence-region NZ_JJLL01000092.1 1 120307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000092.1 RefSeq region 1 120307 . + . ID=NZ_JJLL01000092.1:1..120307;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000092.1 RefSeq gene 1 395 . + . ID=gene-AD11_RS04550;Name=AD11_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04550;old_locus_tag=AD11_0329;partial=true;start_range=.,1 NZ_JJLL01000092.1 Protein Homology CDS 1 395 . + 2 ID=cds-WP_033866285.1;Parent=gene-AD11_RS04550;Dbxref=GenBank:WP_033866285.1;Name=WP_033866285.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AD11_RS04550;partial=true;product=JAB domain-containing protein;protein_id=WP_033866285.1;start_range=.,1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 464 685 . + . ID=gene-AD11_RS04555;Name=AD11_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04555;old_locus_tag=AD11_0330 NZ_JJLL01000092.1 Protein Homology CDS 464 685 . + 0 ID=cds-WP_000692307.1;Parent=gene-AD11_RS04555;Dbxref=GenBank:WP_000692307.1;Name=WP_000692307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AD11_RS04555;product=DUF987 domain-containing protein;protein_id=WP_000692307.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 848 1222 . + . ID=gene-AD11_RS04565;Name=AD11_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04565 NZ_JJLL01000092.1 Protein Homology CDS 848 1222 . + 0 ID=cds-WP_016243360.1;Parent=gene-AD11_RS04565;Dbxref=GenBank:WP_016243360.1;Name=WP_016243360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309432.1;locus_tag=AD11_RS04565;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_016243360.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 1269 1646 . + . ID=gene-AD11_RS04570;Name=AD11_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04570;old_locus_tag=AD11_0333 NZ_JJLL01000092.1 Protein Homology CDS 1269 1646 . + 0 ID=cds-WP_000854695.1;Parent=gene-AD11_RS04570;Dbxref=GenBank:WP_000854695.1;Name=WP_000854695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683029.1;locus_tag=AD11_RS04570;product=TA system toxin CbtA family protein;protein_id=WP_000854695.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 1643 2131 . + . ID=gene-AD11_RS04575;Name=AD11_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04575;old_locus_tag=AD11_0334 NZ_JJLL01000092.1 Protein Homology CDS 1643 2131 . + 0 ID=cds-WP_000761710.1;Parent=gene-AD11_RS04575;Dbxref=GenBank:WP_000761710.1;Name=WP_000761710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=AD11_RS04575;product=DUF5983 family protein;protein_id=WP_000761710.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 2143 2340 . + . ID=gene-AD11_RS04580;Name=AD11_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04580;old_locus_tag=AD11_0335 NZ_JJLL01000092.1 Protein Homology CDS 2143 2340 . + 0 ID=cds-WP_000839228.1;Parent=gene-AD11_RS04580;Dbxref=GenBank:WP_000839228.1;Name=WP_000839228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AD11_RS04580;product=DUF957 domain-containing protein;protein_id=WP_000839228.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 2425 3273 . + . ID=gene-AD11_RS04585;Name=AD11_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04585;old_locus_tag=AD11_0336 NZ_JJLL01000092.1 Protein Homology CDS 2425 3273 . + 0 ID=cds-WP_001280536.1;Parent=gene-AD11_RS04585;Dbxref=GenBank:WP_001280536.1;Name=WP_001280536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280470.1;locus_tag=AD11_RS04585;product=DUF4942 domain-containing protein;protein_id=WP_001280536.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 3366 4685 . - . ID=gene-AD11_RS04590;Name=AD11_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04590;old_locus_tag=AD11_0337 NZ_JJLL01000092.1 Protein Homology CDS 3366 4685 . - 0 ID=cds-WP_000144689.1;Parent=gene-AD11_RS04590;Dbxref=GenBank:WP_000144689.1;Name=WP_000144689.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144690.1;locus_tag=AD11_RS04590;product=tyrosine-type recombinase/integrase;protein_id=WP_000144689.1;transl_table=11 NZ_JJLL01000092.1 RefSeq pseudogene 5022 5360 . - . ID=gene-AD11_RS04595;Name=AD11_RS04595;end_range=5360,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS04595;old_locus_tag=AD11_0338;partial=true;pseudo=true NZ_JJLL01000092.1 Protein Homology CDS 5022 5360 . - 0 ID=cds-AD11_RS04595;Parent=gene-AD11_RS04595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308332.2;locus_tag=AD11_RS04595;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 5411 6367 . - . ID=gene-AD11_RS04600;Name=paoD;gbkey=Gene;gene=paoD;gene_biotype=protein_coding;locus_tag=AD11_RS04600;old_locus_tag=AD11_0339 NZ_JJLL01000092.1 Protein Homology CDS 5411 6367 . - 0 ID=cds-WP_001619172.1;Parent=gene-AD11_RS04600;Dbxref=GenBank:WP_001619172.1;Name=WP_001619172.1;gbkey=CDS;gene=paoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414817.1;locus_tag=AD11_RS04600;product=molybdenum cofactor insertion chaperone PaoD;protein_id=WP_001619172.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 6377 8575 . - . ID=gene-AD11_RS04605;Name=paoC;gbkey=Gene;gene=paoC;gene_biotype=protein_coding;locus_tag=AD11_RS04605;old_locus_tag=AD11_0340 NZ_JJLL01000092.1 Protein Homology CDS 6377 8575 . - 0 ID=cds-WP_001619173.1;Parent=gene-AD11_RS04605;Dbxref=GenBank:WP_001619173.1;Name=WP_001619173.1;gbkey=CDS;gene=paoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414818.1;locus_tag=AD11_RS04605;product=aldehyde oxidoreductase molybdenum-binding subunit PaoC;protein_id=WP_001619173.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 8572 9528 . - . ID=gene-AD11_RS04610;Name=paoB;gbkey=Gene;gene=paoB;gene_biotype=protein_coding;locus_tag=AD11_RS04610;old_locus_tag=AD11_0341 NZ_JJLL01000092.1 Protein Homology CDS 8572 9528 . - 0 ID=cds-WP_000643333.1;Parent=gene-AD11_RS04610;Dbxref=GenBank:WP_000643333.1;Name=WP_000643333.1;gbkey=CDS;gene=paoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414819.1;locus_tag=AD11_RS04610;product=aldehyde oxidoreductase FAD-binding subunit PaoB;protein_id=WP_000643333.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 9525 10214 . - . ID=gene-AD11_RS04615;Name=paoA;gbkey=Gene;gene=paoA;gene_biotype=protein_coding;locus_tag=AD11_RS04615;old_locus_tag=AD11_0342 NZ_JJLL01000092.1 Protein Homology CDS 9525 10214 . - 0 ID=cds-WP_000070700.1;Parent=gene-AD11_RS04615;Dbxref=GenBank:WP_000070700.1;Name=WP_000070700.1;Ontology_term=GO:0046872,GO:0047770,GO:0051536;gbkey=CDS;gene=paoA;go_function=metal ion binding|0046872||IEA,carboxylate reductase activity|0047770||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414820.1;locus_tag=AD11_RS04615;product=aldehyde dehydrogenase iron-sulfur subunit PaoA;protein_id=WP_000070700.1;transl_table=11 NZ_JJLL01000092.1 RefSeq pseudogene 10632 11245 . + . ID=gene-AD11_RS04620;Name=yagU;gbkey=Gene;gene=yagU;gene_biotype=pseudogene;locus_tag=AD11_RS04620;old_locus_tag=AD11_0344;pseudo=true NZ_JJLL01000092.1 Protein Homology CDS 10632 11245 . + 0 ID=cds-AD11_RS04620;Parent=gene-AD11_RS04620;Note=frameshifted;gbkey=CDS;gene=yagU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308344.1;locus_tag=AD11_RS04620;product=YagU family protein;pseudo=true;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 11493 11822 . - . ID=gene-AD11_RS04625;Name=ykgJ;gbkey=Gene;gene=ykgJ;gene_biotype=protein_coding;locus_tag=AD11_RS04625 NZ_JJLL01000092.1 Protein Homology CDS 11493 11822 . - 0 ID=cds-WP_001303809.1;Parent=gene-AD11_RS04625;Dbxref=GenBank:WP_001303809.1;Name=WP_001303809.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;gene=ykgJ;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414822.1;locus_tag=AD11_RS04625;product=YkgJ family cysteine cluster protein;protein_id=WP_001303809.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 12135 12845 . - . ID=gene-AD11_RS04630;Name=ecpE;gbkey=Gene;gene=ecpE;gene_biotype=protein_coding;locus_tag=AD11_RS04630;old_locus_tag=AD11_0346 NZ_JJLL01000092.1 Protein Homology CDS 12135 12845 . - 0 ID=cds-WP_001301243.1;Parent=gene-AD11_RS04630;Dbxref=GenBank:WP_001301243.1;Name=WP_001301243.1;gbkey=CDS;gene=ecpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=AD11_RS04630;product=fimbrial chaperone EcpE;protein_id=WP_001301243.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 12814 14457 . - . ID=gene-AD11_RS04635;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=AD11_RS04635;old_locus_tag=AD11_0347 NZ_JJLL01000092.1 Protein Homology CDS 12814 14457 . - 0 ID=cds-WP_001310578.1;Parent=gene-AD11_RS04635;Dbxref=GenBank:WP_001310578.1;Name=WP_001310578.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414824.1;locus_tag=AD11_RS04635;product=fimbrial adhesin EcpD;protein_id=WP_001310578.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 14447 16972 . - . ID=gene-AD11_RS04640;Name=ecpC;gbkey=Gene;gene=ecpC;gene_biotype=protein_coding;gene_synonym=yagX;locus_tag=AD11_RS04640;old_locus_tag=AD11_0348 NZ_JJLL01000092.1 Protein Homology CDS 14447 16972 . - 0 ID=cds-WP_001619176.1;Parent=gene-AD11_RS04640;Dbxref=GenBank:WP_001619176.1;Name=WP_001619176.1;gbkey=CDS;gene=ecpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414825.1;locus_tag=AD11_RS04640;product=fimbrial usher EcpC;protein_id=WP_001619176.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 16998 17666 . - . ID=gene-AD11_RS04645;Name=ecpB;gbkey=Gene;gene=ecpB;gene_biotype=protein_coding;gene_synonym=yagY;locus_tag=AD11_RS04645;old_locus_tag=AD11_0349 NZ_JJLL01000092.1 Protein Homology CDS 16998 17666 . - 0 ID=cds-WP_000716398.1;Parent=gene-AD11_RS04645;Dbxref=GenBank:WP_000716398.1;Name=WP_000716398.1;gbkey=CDS;gene=ecpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414826.1;locus_tag=AD11_RS04645;product=fimbrial chaperone EcpB;protein_id=WP_000716398.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 17724 18311 . - . ID=gene-AD11_RS04650;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=AD11_RS04650;old_locus_tag=AD11_0350 NZ_JJLL01000092.1 Protein Homology CDS 17724 18311 . - 0 ID=cds-WP_000730972.1;Parent=gene-AD11_RS04650;Dbxref=GenBank:WP_000730972.1;Name=WP_000730972.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308350.1;locus_tag=AD11_RS04650;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_000730972.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 18386 18928 . - . ID=gene-AD11_RS04655;Name=ecpR;gbkey=Gene;gene=ecpR;gene_biotype=protein_coding;gene_synonym=matA;locus_tag=AD11_RS04655;old_locus_tag=AD11_0351 NZ_JJLL01000092.1 Protein Homology CDS 18386 18928 . - 0 ID=cds-WP_001301257.1;Parent=gene-AD11_RS04655;Dbxref=GenBank:WP_001301257.1;Name=WP_001301257.1;Ontology_term=GO:0006355,GO:1902021,GO:0003677;gbkey=CDS;gene=ecpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of bacterial-type flagellum-dependent cell motility|1902021||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308351.2;locus_tag=AD11_RS04655;product=ECP biosynthesis operon DNA-binding transcriptional regulator EcpR;protein_id=WP_001301257.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 19751 19978 . + . ID=gene-AD11_RS04660;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=protein_coding;locus_tag=AD11_RS04660 NZ_JJLL01000092.1 Protein Homology CDS 19751 19978 . + 0 ID=cds-WP_001147279.1;Parent=gene-AD11_RS04660;Dbxref=GenBank:WP_001147279.1;Name=WP_001147279.1;gbkey=CDS;gene=ykgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=AD11_RS04660;product=protein YkgL;protein_id=WP_001147279.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 20013 20153 . - . ID=gene-AD11_RS04665;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=AD11_RS04665;old_locus_tag=AD11_0352 NZ_JJLL01000092.1 Protein Homology CDS 20013 20153 . - 0 ID=cds-WP_000866436.1;Parent=gene-AD11_RS04665;Dbxref=GenBank:WP_000866436.1;Name=WP_000866436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=AD11_RS04665;product=type B 50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 20153 20416 . - . ID=gene-AD11_RS04670;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;locus_tag=AD11_RS04670;old_locus_tag=AD11_0353 NZ_JJLL01000092.1 Protein Homology CDS 20153 20416 . - 0 ID=cds-WP_000803998.1;Parent=gene-AD11_RS04670;Dbxref=GenBank:WP_000803998.1;Name=WP_000803998.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414830.1;locus_tag=AD11_RS04670;product=type B 50S ribosomal protein L31;protein_id=WP_000803998.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 20780 20881 . - . ID=gene-AD11_RS33010;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;locus_tag=AD11_RS33010 NZ_JJLL01000092.1 Protein Homology CDS 20780 20881 . - 0 ID=cds-WP_000662258.1;Parent=gene-AD11_RS33010;Dbxref=GenBank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;gene=ykgR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791238.1;locus_tag=AD11_RS33010;product=small membrane protein YkgR;protein_id=WP_000662258.1;transl_table=11 NZ_JJLL01000092.1 RefSeq pseudogene 21355 21444 . - . ID=gene-AD11_RS32455;Name=AD11_RS32455;end_range=21444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32455;partial=true;pseudo=true NZ_JJLL01000092.1 Protein Homology CDS 21355 21444 . - 0 ID=cds-AD11_RS32455;Parent=gene-AD11_RS32455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=AD11_RS32455;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 21996 26252 . + . ID=gene-AD11_RS04680;Name=fdeC;gbkey=Gene;gene=fdeC;gene_biotype=protein_coding;locus_tag=AD11_RS04680;old_locus_tag=AD11_0354 NZ_JJLL01000092.1 Protein Homology CDS 21996 26252 . + 0 ID=cds-WP_033866286.1;Parent=gene-AD11_RS04680;Dbxref=GenBank:WP_033866286.1;Name=WP_033866286.1;gbkey=CDS;gene=fdeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635811.1;locus_tag=AD11_RS04680;product=inverse autotransporter adhesin FdeC;protein_id=WP_033866286.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 26392 27243 . - . ID=gene-AD11_RS04685;Name=AD11_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04685;old_locus_tag=AD11_0356 NZ_JJLL01000092.1 Protein Homology CDS 26392 27243 . - 0 ID=cds-WP_000621009.1;Parent=gene-AD11_RS04685;Dbxref=GenBank:WP_000621009.1;Name=WP_000621009.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AD11_RS04685;product=helix-turn-helix domain-containing protein;protein_id=WP_000621009.1;transl_table=11 NZ_JJLL01000092.1 RefSeq pseudogene 27546 27674 . + . ID=gene-AD11_RS31405;Name=AD11_RS31405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31405;partial=true;pseudo=true;start_range=.,27546 NZ_JJLL01000092.1 Protein Homology CDS 27546 27674 . + 0 ID=cds-AD11_RS31405;Parent=gene-AD11_RS31405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AD11_RS31405;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,27546;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 27833 28426 . - . ID=gene-AD11_RS04690;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AD11_RS04690;old_locus_tag=AD11_0357 NZ_JJLL01000092.1 Protein Homology CDS 27833 28426 . - 0 ID=cds-WP_001299021.1;Parent=gene-AD11_RS04690;Dbxref=GenBank:WP_001299021.1;Name=WP_001299021.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AD11_RS04690;product=reactive chlorine species resistance protein RclC;protein_id=WP_001299021.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 28438 28674 . - . ID=gene-AD11_RS04695;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AD11_RS04695;old_locus_tag=AD11_0358 NZ_JJLL01000092.1 Protein Homology CDS 28438 28674 . - 0 ID=cds-WP_000474084.1;Parent=gene-AD11_RS04695;Dbxref=GenBank:WP_000474084.1;Name=WP_000474084.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AD11_RS04695;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000474084.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 28783 30108 . - . ID=gene-AD11_RS04700;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AD11_RS04700;old_locus_tag=AD11_0359 NZ_JJLL01000092.1 Protein Homology CDS 28783 30108 . - 0 ID=cds-WP_001046307.1;Parent=gene-AD11_RS04700;Dbxref=GenBank:WP_001046307.1;Name=WP_001046307.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414838.2;locus_tag=AD11_RS04700;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046307.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 30334 31188 . + . ID=gene-AD11_RS04705;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AD11_RS04705;old_locus_tag=AD11_0360 NZ_JJLL01000092.1 Protein Homology CDS 30334 31188 . + 0 ID=cds-WP_000339594.1;Parent=gene-AD11_RS04705;Dbxref=GenBank:WP_000339594.1;Name=WP_000339594.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414839.1;locus_tag=AD11_RS04705;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339594.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 31715 32434 . + . ID=gene-AD11_RS04710;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AD11_RS04710;old_locus_tag=AD11_0362 NZ_JJLL01000092.1 Protein Homology CDS 31715 32434 . + 0 ID=cds-WP_001102108.1;Parent=gene-AD11_RS04710;Dbxref=GenBank:WP_001102108.1;Name=WP_001102108.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AD11_RS04710;product=(Fe-S)-binding protein;protein_id=WP_001102108.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 32445 33872 . + . ID=gene-AD11_RS04715;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AD11_RS04715;old_locus_tag=AD11_0363 NZ_JJLL01000092.1 Protein Homology CDS 32445 33872 . + 0 ID=cds-WP_000023927.1;Parent=gene-AD11_RS04715;Dbxref=GenBank:WP_000023927.1;Name=WP_000023927.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414841.1;locus_tag=AD11_RS04715;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023927.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 33865 34560 . + . ID=gene-AD11_RS04720;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AD11_RS04720;old_locus_tag=AD11_0364 NZ_JJLL01000092.1 Protein Homology CDS 33865 34560 . + 0 ID=cds-WP_000370307.1;Parent=gene-AD11_RS04720;Dbxref=GenBank:WP_000370307.1;Name=WP_000370307.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AD11_RS04720;product=LutC/YkgG family protein;protein_id=WP_000370307.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 34803 35471 . - . ID=gene-AD11_RS04730;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=AD11_RS04730;old_locus_tag=AD11_0366 NZ_JJLL01000092.1 Protein Homology CDS 34803 35471 . - 0 ID=cds-WP_033865205.1;Parent=gene-AD11_RS04730;Dbxref=GenBank:WP_033865205.1;Name=WP_033865205.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AD11_RS04730;product=protein YkgH;protein_id=WP_033865205.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 35684 37354 . - . ID=gene-AD11_RS04735;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AD11_RS04735;old_locus_tag=AD11_0367 NZ_JJLL01000092.1 Protein Homology CDS 35684 37354 . - 0 ID=cds-WP_001159094.1;Parent=gene-AD11_RS04735;Dbxref=GenBank:WP_001159094.1;Name=WP_001159094.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AD11_RS04735;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 37368 38840 . - . ID=gene-AD11_RS04740;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AD11_RS04740;old_locus_tag=AD11_0368 NZ_JJLL01000092.1 Protein Homology CDS 37368 38840 . - 0 ID=cds-WP_001463176.1;Parent=gene-AD11_RS04740;Dbxref=GenBank:WP_001463176.1;Name=WP_001463176.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AD11_RS04740;product=betaine-aldehyde dehydrogenase;protein_id=WP_001463176.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 38854 39441 . - . ID=gene-AD11_RS04745;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AD11_RS04745;old_locus_tag=AD11_0369 NZ_JJLL01000092.1 Protein Homology CDS 38854 39441 . - 0 ID=cds-WP_001335745.1;Parent=gene-AD11_RS04745;Dbxref=GenBank:WP_001335745.1;Name=WP_001335745.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414847.3;locus_tag=AD11_RS04745;product=transcriptional regulator BetI;protein_id=WP_001335745.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 39570 41603 . + . ID=gene-AD11_RS04750;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AD11_RS04750;old_locus_tag=AD11_0370 NZ_JJLL01000092.1 Protein Homology CDS 39570 41603 . + 0 ID=cds-WP_000131044.1;Parent=gene-AD11_RS04750;Dbxref=GenBank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AD11_RS04750;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 41909 41983 . + . ID=gene-AD11_RS31410;Name=AD11_RS31410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31410 NZ_JJLL01000092.1 Protein Homology CDS 41909 41983 . + 0 ID=cds-WP_120795374.1;Parent=gene-AD11_RS31410;Dbxref=GenBank:WP_120795374.1;Name=WP_120795374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AD11_RS31410;product=protein YahV;protein_id=WP_120795374.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 42478 43566 . + . ID=gene-AD11_RS04760;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=AD11_RS04760;old_locus_tag=AD11_0371 NZ_JJLL01000092.1 Protein Homology CDS 42478 43566 . + 0 ID=cds-WP_033865208.1;Parent=gene-AD11_RS04760;Dbxref=GenBank:WP_033865208.1;Name=WP_033865208.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AD11_RS04760;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_033865208.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 43608 44540 . - . ID=gene-AD11_RS04765;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;locus_tag=AD11_RS04765;old_locus_tag=AD11_0372 NZ_JJLL01000092.1 Protein Homology CDS 43608 44540 . - 0 ID=cds-WP_033865209.1;Parent=gene-AD11_RS04765;Dbxref=GenBank:WP_033865209.1;Name=WP_033865209.1;gbkey=CDS;gene=yahB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AD11_RS04765;product=LysR substrate-binding domain-containing protein;protein_id=WP_033865209.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 44632 45129 . - . ID=gene-AD11_RS04770;Name=yahC;gbkey=Gene;gene=yahC;gene_biotype=protein_coding;locus_tag=AD11_RS04770;old_locus_tag=AD11_0373 NZ_JJLL01000092.1 Protein Homology CDS 44632 45129 . - 0 ID=cds-WP_001013892.1;Parent=gene-AD11_RS04770;Dbxref=GenBank:WP_001013892.1;Name=WP_001013892.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yahC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AD11_RS04770;product=DUF1097 domain-containing protein;protein_id=WP_001013892.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 45387 45992 . + . ID=gene-AD11_RS04775;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;locus_tag=AD11_RS04775;old_locus_tag=AD11_0374 NZ_JJLL01000092.1 Protein Homology CDS 45387 45992 . + 0 ID=cds-WP_000023635.1;Parent=gene-AD11_RS04775;Dbxref=GenBank:WP_000023635.1;Name=WP_000023635.1;Ontology_term=GO:0005515;gbkey=CDS;gene=yahD;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414852.1;locus_tag=AD11_RS04775;product=ankyrin repeat domain-containing protein;protein_id=WP_000023635.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 46032 46895 . + . ID=gene-AD11_RS04780;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;locus_tag=AD11_RS04780;old_locus_tag=AD11_0375 NZ_JJLL01000092.1 Protein Homology CDS 46032 46895 . + 0 ID=cds-WP_033865210.1;Parent=gene-AD11_RS04780;Dbxref=GenBank:WP_033865210.1;Name=WP_033865210.1;gbkey=CDS;gene=yahE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AD11_RS04780;product=DUF2877 domain-containing protein;protein_id=WP_033865210.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 46885 48432 . + . ID=gene-AD11_RS04785;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AD11_RS04785;old_locus_tag=AD11_0376 NZ_JJLL01000092.1 Protein Homology CDS 46885 48432 . + 0 ID=cds-WP_000111836.1;Parent=gene-AD11_RS04785;Dbxref=GenBank:WP_000111836.1;Name=WP_000111836.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AD11_RS04785;product=acyl-CoA synthetase FdrA;protein_id=WP_000111836.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 48432 49850 . + . ID=gene-AD11_RS04790;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;locus_tag=AD11_RS04790;old_locus_tag=AD11_0377 NZ_JJLL01000092.1 Protein Homology CDS 48432 49850 . + 0 ID=cds-WP_000083429.1;Parent=gene-AD11_RS04790;Dbxref=GenBank:WP_000083429.1;Name=WP_000083429.1;gbkey=CDS;gene=yahG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AD11_RS04790;product=DUF1116 domain-containing protein;protein_id=WP_000083429.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 49900 50196 . + . ID=gene-AD11_RS04795;Name=yahH;gbkey=Gene;gene=yahH;gene_biotype=protein_coding;locus_tag=AD11_RS04795;old_locus_tag=AD11_0378 NZ_JJLL01000092.1 GeneMarkS-2+ CDS 49900 50196 . + 0 ID=cds-WP_001295687.1;Parent=gene-AD11_RS04795;Dbxref=GenBank:WP_001295687.1;Name=WP_001295687.1;gbkey=CDS;gene=yahH;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS04795;product=protein YahH;protein_id=WP_001295687.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 50272 51222 . + . ID=gene-AD11_RS04800;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=AD11_RS04800;old_locus_tag=AD11_0379 NZ_JJLL01000092.1 Protein Homology CDS 50272 51222 . + 0 ID=cds-WP_000661672.1;Parent=gene-AD11_RS04800;Dbxref=GenBank:WP_000661672.1;Name=WP_000661672.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AD11_RS04800;product=carbamate kinase family protein;protein_id=WP_000661672.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 51232 52614 . + . ID=gene-AD11_RS04805;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;locus_tag=AD11_RS04805;old_locus_tag=AD11_0380 NZ_JJLL01000092.1 Protein Homology CDS 51232 52614 . + 0 ID=cds-WP_000665120.1;Parent=gene-AD11_RS04805;Dbxref=GenBank:WP_000665120.1;Name=WP_000665120.1;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AD11_RS04805;product=amidohydrolase family protein;protein_id=WP_000665120.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 52991 54040 . + . ID=gene-AD11_RS04810;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AD11_RS04810;old_locus_tag=AD11_0381 NZ_JJLL01000092.1 Protein Homology CDS 52991 54040 . + 0 ID=cds-WP_033865211.1;Parent=gene-AD11_RS04810;Dbxref=GenBank:WP_033865211.1;Name=WP_033865211.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414859.1;locus_tag=AD11_RS04810;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_033865211.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 54283 55098 . + . ID=gene-AD11_RS04815;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=AD11_RS04815;old_locus_tag=AD11_0382 NZ_JJLL01000092.1 Protein Homology CDS 54283 55098 . + 0 ID=cds-WP_033865212.1;Parent=gene-AD11_RS04815;Dbxref=GenBank:WP_033865212.1;Name=WP_033865212.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414860.1;locus_tag=AD11_RS04815;product=protein YahL;protein_id=WP_033865212.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 55511 55756 . + . ID=gene-AD11_RS04820;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=AD11_RS04820 NZ_JJLL01000092.1 Protein Homology CDS 55511 55756 . + 0 ID=cds-WP_000290616.1;Parent=gene-AD11_RS04820;Dbxref=GenBank:WP_000290616.1;Name=WP_000290616.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AD11_RS04820;product=protein YahM;protein_id=WP_000290616.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 55773 56444 . - . ID=gene-AD11_RS04825;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AD11_RS04825;old_locus_tag=AD11_0384 NZ_JJLL01000092.1 Protein Homology CDS 55773 56444 . - 0 ID=cds-WP_000976975.1;Parent=gene-AD11_RS04825;Dbxref=GenBank:WP_000976975.1;Name=WP_000976975.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AD11_RS04825;product=LysE family transporter;protein_id=WP_000976975.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 56591 56866 . + . ID=gene-AD11_RS04830;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AD11_RS04830;old_locus_tag=AD11_0385 NZ_JJLL01000092.1 Protein Homology CDS 56591 56866 . + 0 ID=cds-WP_000691956.1;Parent=gene-AD11_RS04830;Dbxref=GenBank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AD11_RS04830;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691956.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 56964 58550 . - . ID=gene-AD11_RS04835;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AD11_RS04835;old_locus_tag=AD11_0387 NZ_JJLL01000092.1 Protein Homology CDS 56964 58550 . - 0 ID=cds-WP_000941055.1;Parent=gene-AD11_RS04835;Dbxref=GenBank:WP_000941055.1;Name=WP_000941055.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308411.1;locus_tag=AD11_RS04835;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941055.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 58789 59679 . + . ID=gene-AD11_RS04840;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AD11_RS04840;old_locus_tag=AD11_0388 NZ_JJLL01000092.1 Protein Homology CDS 58789 59679 . + 0 ID=cds-WP_000052206.1;Parent=gene-AD11_RS04840;Dbxref=GenBank:WP_000052206.1;Name=WP_000052206.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AD11_RS04840;product=methylisocitrate lyase;protein_id=WP_000052206.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 60305 61474 . + . ID=gene-AD11_RS04845;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AD11_RS04845;old_locus_tag=AD11_0389 NZ_JJLL01000092.1 Protein Homology CDS 60305 61474 . + 0 ID=cds-WP_001285927.1;Parent=gene-AD11_RS04845;Dbxref=GenBank:WP_001285927.1;Name=WP_001285927.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AD11_RS04845;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285927.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 61508 62959 . + . ID=gene-AD11_RS04850;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AD11_RS04850;old_locus_tag=AD11_0390 NZ_JJLL01000092.1 Protein Homology CDS 61508 62959 . + 0 ID=cds-WP_001275861.1;Parent=gene-AD11_RS04850;Dbxref=GenBank:WP_001275861.1;Name=WP_001275861.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AD11_RS04850;product=2-methylcitrate dehydratase;protein_id=WP_001275861.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 62999 64885 . + . ID=gene-AD11_RS04855;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AD11_RS04855;old_locus_tag=AD11_0391 NZ_JJLL01000092.1 Protein Homology CDS 62999 64885 . + 0 ID=cds-WP_000010276.1;Parent=gene-AD11_RS04855;Dbxref=GenBank:WP_000010276.1;Name=WP_000010276.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308415.1;locus_tag=AD11_RS04855;product=propionate--CoA ligase;protein_id=WP_000010276.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 65310 66569 . + . ID=gene-AD11_RS04860;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AD11_RS04860;old_locus_tag=AD11_0393 NZ_JJLL01000092.1 Protein Homology CDS 65310 66569 . + 0 ID=cds-WP_033865213.1;Parent=gene-AD11_RS04860;Dbxref=GenBank:WP_033865213.1;Name=WP_033865213.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AD11_RS04860;product=cytosine permease;protein_id=WP_033865213.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 66559 67842 . + . ID=gene-AD11_RS04865;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AD11_RS04865;old_locus_tag=AD11_0394 NZ_JJLL01000092.1 Protein Homology CDS 66559 67842 . + 0 ID=cds-WP_033865215.1;Parent=gene-AD11_RS04865;Dbxref=GenBank:WP_033865215.1;Name=WP_033865215.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AD11_RS04865;product=cytosine/isoguanine deaminase;protein_id=WP_033865215.1;transl_table=11 NZ_JJLL01000092.1 RefSeq pseudogene 67979 68062 . - . ID=gene-AD11_RS33140;Name=AD11_RS33140;end_range=68062,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33140;partial=true;pseudo=true NZ_JJLL01000092.1 Protein Homology CDS 67979 68062 . - 0 ID=cds-AD11_RS33140;Parent=gene-AD11_RS33140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=68062,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308418.1;locus_tag=AD11_RS33140;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 68179 69078 . - . ID=gene-AD11_RS04870;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AD11_RS04870;old_locus_tag=AD11_0395 NZ_JJLL01000092.1 Protein Homology CDS 68179 69078 . - 0 ID=cds-WP_000952503.1;Parent=gene-AD11_RS04870;Dbxref=GenBank:WP_000952503.1;Name=WP_000952503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AD11_RS04870;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 69187 69846 . + . ID=gene-AD11_RS04875;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AD11_RS04875;old_locus_tag=AD11_0396 NZ_JJLL01000092.1 Protein Homology CDS 69187 69846 . + 0 ID=cds-WP_033865217.1;Parent=gene-AD11_RS04875;Dbxref=GenBank:WP_033865217.1;Name=WP_033865217.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AD11_RS04875;product=carbonic anhydrase CynT;protein_id=WP_033865217.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 69877 70347 . + . ID=gene-AD11_RS04880;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AD11_RS04880;old_locus_tag=AD11_0397 NZ_JJLL01000092.1 Protein Homology CDS 69877 70347 . + 0 ID=cds-WP_000616243.1;Parent=gene-AD11_RS04880;Dbxref=GenBank:WP_000616243.1;Name=WP_000616243.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414874.1;locus_tag=AD11_RS04880;product=cyanase;protein_id=WP_000616243.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 70353 71534 . + . ID=gene-AD11_RS04885;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AD11_RS04885;old_locus_tag=AD11_0398 NZ_JJLL01000092.1 Protein Homology CDS 70353 71534 . + 0 ID=cds-WP_001301263.1;Parent=gene-AD11_RS04885;Dbxref=GenBank:WP_001301263.1;Name=WP_001301263.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AD11_RS04885;product=cyanate transporter CynX;protein_id=WP_001301263.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 71637 72248 . - . ID=gene-AD11_RS04890;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AD11_RS04890;old_locus_tag=AD11_0399 NZ_JJLL01000092.1 Protein Homology CDS 71637 72248 . - 0 ID=cds-WP_001335915.1;Parent=gene-AD11_RS04890;Dbxref=GenBank:WP_001335915.1;Name=WP_001335915.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414876.1;locus_tag=AD11_RS04890;product=galactoside O-acetyltransferase;protein_id=WP_001335915.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 72314 73567 . - . ID=gene-AD11_RS04895;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AD11_RS04895;old_locus_tag=AD11_0400 NZ_JJLL01000092.1 Protein Homology CDS 72314 73567 . - 0 ID=cds-WP_000291549.1;Parent=gene-AD11_RS04895;Dbxref=GenBank:WP_000291549.1;Name=WP_000291549.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AD11_RS04895;product=lactose permease;protein_id=WP_000291549.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 73619 76693 . - . ID=gene-AD11_RS04900;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AD11_RS04900;old_locus_tag=AD11_0401 NZ_JJLL01000092.1 Protein Homology CDS 73619 76693 . - 0 ID=cds-WP_033865218.1;Parent=gene-AD11_RS04900;Dbxref=GenBank:WP_033865218.1;Name=WP_033865218.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414878.1;locus_tag=AD11_RS04900;product=beta-galactosidase;protein_id=WP_033865218.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 76816 77898 . - . ID=gene-AD11_RS04905;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AD11_RS04905;old_locus_tag=AD11_0402 NZ_JJLL01000092.1 Protein Homology CDS 76816 77898 . - 0 ID=cds-WP_000805902.1;Parent=gene-AD11_RS04905;Dbxref=GenBank:WP_000805902.1;Name=WP_000805902.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AD11_RS04905;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805902.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 77975 78808 . - . ID=gene-AD11_RS04910;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AD11_RS04910;old_locus_tag=AD11_0403 NZ_JJLL01000092.1 Protein Homology CDS 77975 78808 . - 0 ID=cds-WP_001297745.1;Parent=gene-AD11_RS04910;Dbxref=GenBank:WP_001297745.1;Name=WP_001297745.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AD11_RS04910;product=DNA-binding transcriptional regulator;protein_id=WP_001297745.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 78999 80663 . + . ID=gene-AD11_RS04915;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AD11_RS04915;old_locus_tag=AD11_0404 NZ_JJLL01000092.1 Protein Homology CDS 78999 80663 . + 0 ID=cds-WP_001007411.1;Parent=gene-AD11_RS04915;Dbxref=GenBank:WP_001007411.1;Name=WP_001007411.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414881.1;locus_tag=AD11_RS04915;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007411.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 80665 81609 . + . ID=gene-AD11_RS04920;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AD11_RS04920;old_locus_tag=AD11_0405 NZ_JJLL01000092.1 Protein Homology CDS 80665 81609 . + 0 ID=cds-WP_000543457.1;Parent=gene-AD11_RS04920;Dbxref=GenBank:WP_000543457.1;Name=WP_000543457.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AD11_RS04920;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_000543457.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 81627 82493 . + . ID=gene-AD11_RS04925;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AD11_RS04925;old_locus_tag=AD11_0406 NZ_JJLL01000092.1 Protein Homology CDS 81627 82493 . + 0 ID=cds-WP_000121898.1;Parent=gene-AD11_RS04925;Dbxref=GenBank:WP_000121898.1;Name=WP_000121898.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AD11_RS04925;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121898.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 82503 83312 . + . ID=gene-AD11_RS04930;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AD11_RS04930;old_locus_tag=AD11_0407 NZ_JJLL01000092.1 Protein Homology CDS 82503 83312 . + 0 ID=cds-WP_033566556.1;Parent=gene-AD11_RS04930;Dbxref=GenBank:WP_033566556.1;Name=WP_033566556.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414884.2;locus_tag=AD11_RS04930;product=2-keto-4-pentenoate hydratase;protein_id=WP_033566556.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 83309 84259 . + . ID=gene-AD11_RS04935;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AD11_RS04935;old_locus_tag=AD11_0408 NZ_JJLL01000092.1 Protein Homology CDS 83309 84259 . + 0 ID=cds-WP_000044314.1;Parent=gene-AD11_RS04935;Dbxref=GenBank:WP_000044314.1;Name=WP_000044314.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AD11_RS04935;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 84256 85269 . + . ID=gene-AD11_RS04940;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AD11_RS04940;old_locus_tag=AD11_0409 NZ_JJLL01000092.1 Protein Homology CDS 84256 85269 . + 0 ID=cds-WP_001013494.1;Parent=gene-AD11_RS04940;Dbxref=GenBank:WP_001013494.1;Name=WP_001013494.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AD11_RS04940;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013494.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 86049 87260 . + . ID=gene-AD11_RS04945;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AD11_RS04945;old_locus_tag=AD11_0410 NZ_JJLL01000092.1 Protein Homology CDS 86049 87260 . + 0 ID=cds-WP_000107624.1;Parent=gene-AD11_RS04945;Dbxref=GenBank:WP_000107624.1;Name=WP_000107624.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308435.2;locus_tag=AD11_RS04945;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_000107624.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 87362 87901 . + . ID=gene-AD11_RS04950;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=AD11_RS04950;old_locus_tag=AD11_0411 NZ_JJLL01000092.1 Protein Homology CDS 87362 87901 . + 0 ID=cds-WP_001619192.1;Parent=gene-AD11_RS04950;Dbxref=GenBank:WP_001619192.1;Name=WP_001619192.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AD11_RS04950;product=DUF2058 domain-containing protein;protein_id=WP_001619192.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 88027 88860 . - . ID=gene-AD11_RS04955;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AD11_RS04955;old_locus_tag=AD11_0412 NZ_JJLL01000092.1 Protein Homology CDS 88027 88860 . - 0 ID=cds-WP_000419042.1;Parent=gene-AD11_RS04955;Dbxref=GenBank:WP_000419042.1;Name=WP_000419042.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AD11_RS04955;product=S-formylglutathione hydrolase;protein_id=WP_000419042.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 88953 90062 . - . ID=gene-AD11_RS04960;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AD11_RS04960;old_locus_tag=AD11_0413 NZ_JJLL01000092.1 Protein Homology CDS 88953 90062 . - 0 ID=cds-WP_000842100.1;Parent=gene-AD11_RS04960;Dbxref=GenBank:WP_000842100.1;Name=WP_000842100.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AD11_RS04960;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842100.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 90097 90372 . - . ID=gene-AD11_RS04965;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AD11_RS04965;old_locus_tag=AD11_0414 NZ_JJLL01000092.1 Protein Homology CDS 90097 90372 . - 0 ID=cds-WP_001141271.1;Parent=gene-AD11_RS04965;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AD11_RS04965;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 90560 91333 . - . ID=gene-AD11_RS04970;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=AD11_RS04970;old_locus_tag=AD11_0415 NZ_JJLL01000092.1 Protein Homology CDS 90560 91333 . - 0 ID=cds-WP_000597113.1;Parent=gene-AD11_RS04970;Dbxref=GenBank:WP_000597113.1;Name=WP_000597113.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AD11_RS04970;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_000597113.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 91335 91916 . - . ID=gene-AD11_RS04975;Name=AD11_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS04975;old_locus_tag=AD11_0416 NZ_JJLL01000092.1 Protein Homology CDS 91335 91916 . - 0 ID=cds-WP_024183734.1;Parent=gene-AD11_RS04975;Dbxref=GenBank:WP_024183734.1;Name=WP_024183734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012602184.1;locus_tag=AD11_RS04975;product=acetyltransferase;protein_id=WP_024183734.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 91894 93090 . - . ID=gene-AD11_RS04980;Name=yaiP;gbkey=Gene;gene=yaiP;gene_biotype=protein_coding;locus_tag=AD11_RS04980;old_locus_tag=AD11_0417 NZ_JJLL01000092.1 Protein Homology CDS 91894 93090 . - 0 ID=cds-WP_001469837.1;Parent=gene-AD11_RS04980;Dbxref=GenBank:WP_001469837.1;Name=WP_001469837.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=yaiP;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=AD11_RS04980;product=glycosyltransferase;protein_id=WP_001469837.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 93115 93234 . + . ID=gene-AD11_RS33145;Name=AD11_RS33145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33145 NZ_JJLL01000092.1 Protein Homology CDS 93115 93234 . + 0 ID=cds-WP_122995270.1;Parent=gene-AD11_RS33145;Dbxref=GenBank:WP_122995270.1;Name=WP_122995270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048625.1;locus_tag=AD11_RS33145;product=hypothetical protein;protein_id=WP_122995270.1;transl_table=11 NZ_JJLL01000092.1 RefSeq pseudogene 93361 93771 . - . ID=gene-AD11_RS33150;Name=AD11_RS33150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33150;partial=true;pseudo=true;start_range=.,93361 NZ_JJLL01000092.1 Protein Homology CDS 93361 93771 . - 0 ID=cds-AD11_RS33150;Parent=gene-AD11_RS33150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: protein motif:HMM:NF014625.6;locus_tag=AD11_RS33150;partial=true;product=PIG-L deacetylase family protein;pseudo=true;start_range=.,93361;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 94387 95349 . + . ID=gene-AD11_RS04990;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AD11_RS04990;old_locus_tag=AD11_0419 NZ_JJLL01000092.1 Protein Homology CDS 94387 95349 . + 0 ID=cds-WP_001018416.1;Parent=gene-AD11_RS04990;Dbxref=GenBank:WP_001018416.1;Name=WP_001018416.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AD11_RS04990;product=taurine ABC transporter substrate-binding protein;protein_id=WP_001018416.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 95362 96129 . + . ID=gene-AD11_RS04995;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AD11_RS04995;old_locus_tag=AD11_0420 NZ_JJLL01000092.1 Protein Homology CDS 95362 96129 . + 0 ID=cds-WP_000939399.1;Parent=gene-AD11_RS04995;Dbxref=GenBank:WP_000939399.1;Name=WP_000939399.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308447.1;locus_tag=AD11_RS04995;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939399.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 96126 96953 . + . ID=gene-AD11_RS05000;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AD11_RS05000;old_locus_tag=AD11_0421 NZ_JJLL01000092.1 Protein Homology CDS 96126 96953 . + 0 ID=cds-WP_032237795.1;Parent=gene-AD11_RS05000;Dbxref=GenBank:WP_032237795.1;Name=WP_032237795.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706205.1;locus_tag=AD11_RS05000;product=taurine ABC transporter permease TauC;protein_id=WP_032237795.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 96950 97801 . + . ID=gene-AD11_RS05005;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AD11_RS05005;old_locus_tag=AD11_0422 NZ_JJLL01000092.1 Protein Homology CDS 96950 97801 . + 0 ID=cds-WP_000004049.1;Parent=gene-AD11_RS05005;Dbxref=GenBank:WP_000004049.1;Name=WP_000004049.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=AD11_RS05005;product=taurine dioxygenase;protein_id=WP_000004049.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 97907 98881 . - . ID=gene-AD11_RS05010;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AD11_RS05010;old_locus_tag=AD11_0423 NZ_JJLL01000092.1 Protein Homology CDS 97907 98881 . - 0 ID=cds-WP_001295337.1;Parent=gene-AD11_RS05010;Dbxref=GenBank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AD11_RS05010;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 99404 102382 . + . ID=gene-AD11_RS05015;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=AD11_RS05015;old_locus_tag=AD11_0425 NZ_JJLL01000092.1 Protein Homology CDS 99404 102382 . + 0 ID=cds-WP_032237794.1;Parent=gene-AD11_RS05015;Dbxref=GenBank:WP_032237794.1;Name=WP_032237794.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308451.1;locus_tag=AD11_RS05015;product=autotransporter adhesin EhaB;protein_id=WP_032237794.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 102470 103093 . + . ID=gene-AD11_RS05020;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AD11_RS05020;old_locus_tag=AD11_0426 NZ_JJLL01000092.1 Protein Homology CDS 102470 103093 . + 0 ID=cds-WP_001295817.1;Parent=gene-AD11_RS05020;Dbxref=GenBank:WP_001295817.1;Name=WP_001295817.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AD11_RS05020;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295817.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 103094 104251 . - . ID=gene-AD11_RS05025;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AD11_RS05025;old_locus_tag=AD11_0427 NZ_JJLL01000092.1 Protein Homology CDS 103094 104251 . - 0 ID=cds-WP_000830738.1;Parent=gene-AD11_RS05025;Dbxref=GenBank:WP_000830738.1;Name=WP_000830738.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AD11_RS05025;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830738.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 104603 105823 . + . ID=gene-AD11_RS05035;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AD11_RS05035;old_locus_tag=AD11_0428 NZ_JJLL01000092.1 Protein Homology CDS 104603 105823 . + 0 ID=cds-WP_000477009.1;Parent=gene-AD11_RS05035;Dbxref=GenBank:WP_000477009.1;Name=WP_000477009.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706191.2;locus_tag=AD11_RS05035;product=peptide antibiotic transporter SbmA;protein_id=WP_000477009.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 105836 106930 . + . ID=gene-AD11_RS05040;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AD11_RS05040;old_locus_tag=AD11_0429 NZ_JJLL01000092.1 Protein Homology CDS 105836 106930 . + 0 ID=cds-WP_000092069.1;Parent=gene-AD11_RS05040;Dbxref=GenBank:WP_000092069.1;Name=WP_000092069.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706190.1;locus_tag=AD11_RS05040;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_000092069.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 106989 107297 . - . ID=gene-AD11_RS05045;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=AD11_RS05045;old_locus_tag=AD11_0430 NZ_JJLL01000092.1 Protein Homology CDS 106989 107297 . - 0 ID=cds-WP_000763151.1;Parent=gene-AD11_RS05045;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AD11_RS05045;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 107557 107769 . + . ID=gene-AD11_RS31415;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=AD11_RS31415;old_locus_tag=AD11_0431 NZ_JJLL01000092.1 Protein Homology CDS 107557 107769 . + 0 ID=cds-WP_001295334.1;Parent=gene-AD11_RS31415;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AD11_RS31415;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 107793 108887 . - . ID=gene-AD11_RS05055;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AD11_RS05055;old_locus_tag=AD11_0432 NZ_JJLL01000092.1 Protein Homology CDS 107793 108887 . - 0 ID=cds-WP_000413677.1;Parent=gene-AD11_RS05055;Dbxref=GenBank:WP_000413677.1;Name=WP_000413677.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AD11_RS05055;product=D-alanine--D-alanine ligase;protein_id=WP_000413677.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 108965 109168 . + . ID=gene-AD11_RS32005;Name=AD11_RS32005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32005;old_locus_tag=AD11_0433 NZ_JJLL01000092.1 Protein Homology CDS 108965 109168 . + 0 ID=cds-WP_001300163.1;Parent=gene-AD11_RS32005;Dbxref=GenBank:WP_001300163.1;Name=WP_001300163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AD11_RS32005;product=hypothetical protein;protein_id=WP_001300163.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 109350 109610 . + . ID=gene-AD11_RS05065;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AD11_RS05065;old_locus_tag=AD11_0434 NZ_JJLL01000092.1 Protein Homology CDS 109350 109610 . + 0 ID=cds-WP_000792970.1;Parent=gene-AD11_RS05065;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AD11_RS05065;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 109711 111126 . + . ID=gene-AD11_RS05070;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AD11_RS05070;old_locus_tag=AD11_0435 NZ_JJLL01000092.1 Protein Homology CDS 109711 111126 . + 0 ID=cds-WP_001351635.1;Parent=gene-AD11_RS05070;Dbxref=GenBank:WP_001351635.1;Name=WP_001351635.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AD11_RS05070;product=alkaline phosphatase;protein_id=WP_001351635.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 111245 111565 . + . ID=gene-AD11_RS05075;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AD11_RS05075;old_locus_tag=AD11_0436 NZ_JJLL01000092.1 Protein Homology CDS 111245 111565 . + 0 ID=cds-WP_001295332.1;Parent=gene-AD11_RS05075;Dbxref=GenBank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AD11_RS05075;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 111667 112782 . + . ID=gene-AD11_RS05080;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AD11_RS05080;old_locus_tag=AD11_0437 NZ_JJLL01000092.1 Protein Homology CDS 111667 112782 . + 0 ID=cds-WP_000484048.1;Parent=gene-AD11_RS05080;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AD11_RS05080;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 112799 113608 . - . ID=gene-AD11_RS05085;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AD11_RS05085;old_locus_tag=AD11_0438 NZ_JJLL01000092.1 Protein Homology CDS 112799 113608 . - 0 ID=cds-WP_001295331.1;Parent=gene-AD11_RS05085;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AD11_RS05085;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 113728 114192 . + . ID=gene-AD11_RS05090;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=AD11_RS05090;old_locus_tag=AD11_0439 NZ_JJLL01000092.1 Protein Homology CDS 113728 114192 . + 0 ID=cds-WP_000158153.1;Parent=gene-AD11_RS05090;Dbxref=GenBank:WP_000158153.1;Name=WP_000158153.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619195.1;locus_tag=AD11_RS05090;product=YaiI/YqxD family protein;protein_id=WP_000158153.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 114369 114893 . + . ID=gene-AD11_RS05095;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AD11_RS05095;old_locus_tag=AD11_0440 NZ_JJLL01000092.1 Protein Homology CDS 114369 114893 . + 0 ID=cds-WP_000193393.1;Parent=gene-AD11_RS05095;Dbxref=GenBank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AD11_RS05095;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 114943 115134 . + . ID=gene-AD11_RS05100;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AD11_RS05100;old_locus_tag=AD11_0441 NZ_JJLL01000092.1 Protein Homology CDS 114943 115134 . + 0 ID=cds-WP_001142439.1;Parent=gene-AD11_RS05100;Dbxref=GenBank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AD11_RS05100;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 115392 116069 . + . ID=gene-AD11_RS05110;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=AD11_RS05110;old_locus_tag=AD11_0442 NZ_JJLL01000092.1 Protein Homology CDS 115392 116069 . + 0 ID=cds-WP_001276420.1;Parent=gene-AD11_RS05110;Dbxref=GenBank:WP_001276420.1;Name=WP_001276420.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=AD11_RS05110;product=AroM family protein;protein_id=WP_001276420.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 116141 116425 . + . ID=gene-AD11_RS05115;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AD11_RS05115;old_locus_tag=AD11_0443 NZ_JJLL01000092.1 Protein Homology CDS 116141 116425 . + 0 ID=cds-WP_000941942.1;Parent=gene-AD11_RS05115;Dbxref=GenBank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AD11_RS05115;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11 NZ_JJLL01000092.1 RefSeq pseudogene 116573 116914 . + . ID=gene-AD11_RS05120;Name=AD11_RS05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS05120;old_locus_tag=AD11_0444;partial=true;pseudo=true;start_range=.,116573 NZ_JJLL01000092.1 Protein Homology CDS 116573 116914 . + 0 ID=cds-AD11_RS05120;Parent=gene-AD11_RS05120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AD11_RS05120;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,116573;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 116911 116994 . + . ID=gene-AD11_RS31420;Name=AD11_RS31420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31420 NZ_JJLL01000092.1 Protein Homology CDS 116911 116994 . + 0 ID=cds-WP_120795376.1;Parent=gene-AD11_RS31420;Dbxref=GenBank:WP_120795376.1;Name=WP_120795376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AD11_RS31420;product=protein YkiD;protein_id=WP_120795376.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 117072 117983 . - . ID=gene-AD11_RS05125;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AD11_RS05125;old_locus_tag=AD11_0445 NZ_JJLL01000092.1 Protein Homology CDS 117072 117983 . - 0 ID=cds-WP_001298537.1;Parent=gene-AD11_RS05125;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AD11_RS05125;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 118108 119016 . + . ID=gene-AD11_RS05130;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AD11_RS05130;old_locus_tag=AD11_0446 NZ_JJLL01000092.1 Protein Homology CDS 118108 119016 . + 0 ID=cds-WP_001219309.1;Parent=gene-AD11_RS05130;Dbxref=GenBank:WP_001219309.1;Name=WP_001219309.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AD11_RS05130;product=fructokinase;protein_id=WP_001219309.1;transl_table=11 NZ_JJLL01000092.1 RefSeq gene 119471 120307 . - . ID=gene-AD11_RS05135;Name=araJ;end_range=120307,.;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AD11_RS05135;old_locus_tag=AD11_0447;partial=true NZ_JJLL01000092.1 Protein Homology CDS 119471 120307 . - 0 ID=cds-WP_033866289.1;Parent=gene-AD11_RS05135;Dbxref=GenBank:WP_033866289.1;Name=WP_033866289.1;Ontology_term=GO:0055085,GO:0022857;end_range=120307,.;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AD11_RS05135;partial=true;product=MFS transporter AraJ;protein_id=WP_033866289.1;transl_table=11 ##sequence-region NZ_JJLL01000093.1 1 114774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000093.1 RefSeq region 1 114774 . + . ID=NZ_JJLL01000093.1:1..114774;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000093.1 RefSeq gene 1 500 . + . ID=gene-AD11_RS05140;Name=AD11_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05140;old_locus_tag=AD11_0448;partial=true;start_range=.,1 NZ_JJLL01000093.1 Protein Homology CDS 1 500 . + 2 ID=cds-WP_032305357.1;Parent=gene-AD11_RS05140;Dbxref=GenBank:WP_032305357.1;Name=WP_032305357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AD11_RS05140;partial=true;product=ROK family protein;protein_id=WP_032305357.1;start_range=.,1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 747 1931 . - . ID=gene-AD11_RS05145;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AD11_RS05145;old_locus_tag=AD11_0449 NZ_JJLL01000093.1 Protein Homology CDS 747 1931 . - 0 ID=cds-WP_032083479.1;Parent=gene-AD11_RS05145;Dbxref=GenBank:WP_032083479.1;Name=WP_032083479.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AD11_RS05145;product=MFS transporter AraJ;protein_id=WP_032083479.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 2057 5200 . - . ID=gene-AD11_RS05150;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AD11_RS05150;old_locus_tag=AD11_0450 NZ_JJLL01000093.1 Protein Homology CDS 2057 5200 . - 0 ID=cds-WP_033865220.1;Parent=gene-AD11_RS05150;Dbxref=GenBank:WP_033865220.1;Name=WP_033865220.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706285.1;locus_tag=AD11_RS05150;product=exonuclease subunit SbcC;protein_id=WP_033865220.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 5197 6399 . - . ID=gene-AD11_RS05155;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AD11_RS05155;old_locus_tag=AD11_0451 NZ_JJLL01000093.1 Protein Homology CDS 5197 6399 . - 0 ID=cds-WP_001221318.1;Parent=gene-AD11_RS05155;Dbxref=GenBank:WP_001221318.1;Name=WP_001221318.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AD11_RS05155;product=exonuclease subunit SbcD;protein_id=WP_001221318.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 6589 7278 . + . ID=gene-AD11_RS05160;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AD11_RS05160;old_locus_tag=AD11_0453 NZ_JJLL01000093.1 Protein Homology CDS 6589 7278 . + 0 ID=cds-WP_000113933.1;Parent=gene-AD11_RS05160;Dbxref=GenBank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AD11_RS05160;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 7336 8631 . + . ID=gene-AD11_RS05165;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AD11_RS05165;old_locus_tag=AD11_0454 NZ_JJLL01000093.1 Protein Homology CDS 7336 8631 . + 0 ID=cds-WP_000893623.1;Parent=gene-AD11_RS05165;Dbxref=GenBank:WP_000893623.1;Name=WP_000893623.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414934.1;locus_tag=AD11_RS05165;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893623.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 9038 10357 . + . ID=gene-AD11_RS05170;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AD11_RS05170;old_locus_tag=AD11_0456 NZ_JJLL01000093.1 Protein Homology CDS 9038 10357 . + 0 ID=cds-WP_000149639.1;Parent=gene-AD11_RS05170;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AD11_RS05170;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 10433 11806 . + . ID=gene-AD11_RS05175;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AD11_RS05175;old_locus_tag=AD11_0457 NZ_JJLL01000093.1 Protein Homology CDS 10433 11806 . + 0 ID=cds-WP_001295329.1;Parent=gene-AD11_RS05175;Dbxref=GenBank:WP_001295329.1;Name=WP_001295329.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AD11_RS05175;product=proline-specific permease ProY;protein_id=WP_001295329.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 11962 13779 . + . ID=gene-AD11_RS05180;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AD11_RS05180;old_locus_tag=AD11_0458 NZ_JJLL01000093.1 Protein Homology CDS 11962 13779 . + 0 ID=cds-WP_001514977.1;Parent=gene-AD11_RS05180;Dbxref=GenBank:WP_001514977.1;Name=WP_001514977.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AD11_RS05180;product=maltodextrin glucosidase;protein_id=WP_001514977.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 13784 14365 . - . ID=gene-AD11_RS05185;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AD11_RS05185;old_locus_tag=AD11_0459 NZ_JJLL01000093.1 Protein Homology CDS 13784 14365 . - 0 ID=cds-WP_001009885.1;Parent=gene-AD11_RS05185;Dbxref=GenBank:WP_001009885.1;Name=WP_001009885.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AD11_RS05185;product=ACP phosphodiesterase;protein_id=WP_001009885.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 14458 15528 . + . ID=gene-AD11_RS05190;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AD11_RS05190;old_locus_tag=AD11_0460 NZ_JJLL01000093.1 Protein Homology CDS 14458 15528 . + 0 ID=cds-WP_001266503.1;Parent=gene-AD11_RS05190;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AD11_RS05190;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 15584 16711 . + . ID=gene-AD11_RS05195;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AD11_RS05195;old_locus_tag=AD11_0461 NZ_JJLL01000093.1 Protein Homology CDS 15584 16711 . + 0 ID=cds-WP_000667319.1;Parent=gene-AD11_RS05195;Dbxref=GenBank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AD11_RS05195;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 16734 17066 . + . ID=gene-AD11_RS05200;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AD11_RS05200;old_locus_tag=AD11_0462 NZ_JJLL01000093.1 Protein Homology CDS 16734 17066 . + 0 ID=cds-WP_000007629.1;Parent=gene-AD11_RS05200;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AD11_RS05200;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 17094 18941 . + . ID=gene-AD11_RS05205;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AD11_RS05205;old_locus_tag=AD11_0463 NZ_JJLL01000093.1 Protein Homology CDS 17094 18941 . + 0 ID=cds-WP_000934822.1;Parent=gene-AD11_RS05205;Dbxref=GenBank:WP_000934822.1;Name=WP_000934822.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AD11_RS05205;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 18952 19923 . + . ID=gene-AD11_RS05210;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AD11_RS05210;old_locus_tag=AD11_0464 NZ_JJLL01000093.1 Protein Homology CDS 18952 19923 . + 0 ID=cds-WP_000046637.1;Parent=gene-AD11_RS05210;Dbxref=GenBank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AD11_RS05210;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 20051 20398 . + . ID=gene-AD11_RS05215;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AD11_RS05215;old_locus_tag=AD11_0465 NZ_JJLL01000093.1 Protein Homology CDS 20051 20398 . + 0 ID=cds-WP_000974813.1;Parent=gene-AD11_RS05215;Dbxref=GenBank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AD11_RS05215;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 20575 21459 . - . ID=gene-AD11_RS05225;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AD11_RS05225;old_locus_tag=AD11_0466 NZ_JJLL01000093.1 Protein Homology CDS 20575 21459 . - 0 ID=cds-WP_001295328.1;Parent=gene-AD11_RS05225;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AD11_RS05225;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 21758 22297 . - . ID=gene-AD11_RS05230;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AD11_RS05230;old_locus_tag=AD11_0467 NZ_JJLL01000093.1 Protein Homology CDS 21758 22297 . - 0 ID=cds-WP_001301329.1;Parent=gene-AD11_RS05230;Dbxref=GenBank:WP_001301329.1;Name=WP_001301329.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001430049.1;locus_tag=AD11_RS05230;product=DUF3251 domain-containing protein;protein_id=WP_001301329.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 22448 22897 . + . ID=gene-AD11_RS05235;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AD11_RS05235;old_locus_tag=AD11_0468 NZ_JJLL01000093.1 Protein Homology CDS 22448 22897 . + 0 ID=cds-WP_000543535.1;Parent=gene-AD11_RS05235;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AD11_RS05235;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 22901 24004 . + . ID=gene-AD11_RS05240;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AD11_RS05240;old_locus_tag=AD11_0469 NZ_JJLL01000093.1 Protein Homology CDS 22901 24004 . + 0 ID=cds-WP_001150456.1;Parent=gene-AD11_RS05240;Dbxref=GenBank:WP_001150456.1;Name=WP_001150456.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414948.1;locus_tag=AD11_RS05240;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150456.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 24093 24563 . + . ID=gene-AD11_RS05245;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AD11_RS05245;old_locus_tag=AD11_0470 NZ_JJLL01000093.1 Protein Homology CDS 24093 24563 . + 0 ID=cds-WP_001021161.1;Parent=gene-AD11_RS05245;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AD11_RS05245;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 24583 25002 . + . ID=gene-AD11_RS05250;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AD11_RS05250;old_locus_tag=AD11_0471 NZ_JJLL01000093.1 Protein Homology CDS 24583 25002 . + 0 ID=cds-WP_000801125.1;Parent=gene-AD11_RS05250;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AD11_RS05250;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 25080 26057 . + . ID=gene-AD11_RS05255;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AD11_RS05255;old_locus_tag=AD11_0472 NZ_JJLL01000093.1 Protein Homology CDS 25080 26057 . + 0 ID=cds-WP_000742107.1;Parent=gene-AD11_RS05255;Dbxref=GenBank:WP_000742107.1;Name=WP_000742107.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AD11_RS05255;product=thiamine-phosphate kinase;protein_id=WP_000742107.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 26035 26553 . + . ID=gene-AD11_RS05260;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AD11_RS05260;old_locus_tag=AD11_0473 NZ_JJLL01000093.1 Protein Homology CDS 26035 26553 . + 0 ID=cds-WP_000154044.1;Parent=gene-AD11_RS05260;Dbxref=GenBank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AD11_RS05260;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 26607 27581 . - . ID=gene-AD11_RS05265;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AD11_RS05265;old_locus_tag=AD11_0474 NZ_JJLL01000093.1 Protein Homology CDS 26607 27581 . - 0 ID=cds-WP_001199800.1;Parent=gene-AD11_RS05265;Dbxref=GenBank:WP_001199800.1;Name=WP_001199800.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AD11_RS05265;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199800.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 27761 29623 . - . ID=gene-AD11_RS05270;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AD11_RS05270;old_locus_tag=AD11_0475 NZ_JJLL01000093.1 Protein Homology CDS 27761 29623 . - 0 ID=cds-WP_000006806.1;Parent=gene-AD11_RS05270;Dbxref=GenBank:WP_000006806.1;Name=WP_000006806.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=AD11_RS05270;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006806.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 29648 30547 . - . ID=gene-AD11_RS05275;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AD11_RS05275;old_locus_tag=AD11_0476 NZ_JJLL01000093.1 Protein Homology CDS 29648 30547 . - 0 ID=cds-WP_000347217.1;Parent=gene-AD11_RS05275;Dbxref=GenBank:WP_000347217.1;Name=WP_000347217.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AD11_RS05275;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347217.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 30547 30789 . - . ID=gene-AD11_RS05280;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AD11_RS05280;old_locus_tag=AD11_0477 NZ_JJLL01000093.1 Protein Homology CDS 30547 30789 . - 0 ID=cds-WP_001124935.1;Parent=gene-AD11_RS05280;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AD11_RS05280;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 30995 32443 . + . ID=gene-AD11_RS05285;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AD11_RS05285;old_locus_tag=AD11_0478 NZ_JJLL01000093.1 Protein Homology CDS 30995 32443 . + 0 ID=cds-WP_000668682.1;Parent=gene-AD11_RS05285;Dbxref=GenBank:WP_000668682.1;Name=WP_000668682.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AD11_RS05285;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668682.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 32497 33087 . - . ID=gene-AD11_RS05290;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AD11_RS05290;old_locus_tag=AD11_0479 NZ_JJLL01000093.1 Protein Homology CDS 32497 33087 . - 0 ID=cds-WP_001276305.1;Parent=gene-AD11_RS05290;Dbxref=GenBank:WP_001276305.1;Name=WP_001276305.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414958.4;locus_tag=AD11_RS05290;product=protein deglycase YajL;protein_id=WP_001276305.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 33050 33961 . - . ID=gene-AD11_RS05295;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AD11_RS05295;old_locus_tag=AD11_0480 NZ_JJLL01000093.1 Protein Homology CDS 33050 33961 . - 0 ID=cds-WP_000705865.1;Parent=gene-AD11_RS05295;Dbxref=GenBank:WP_000705865.1;Name=WP_000705865.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AD11_RS05295;product=2-dehydropantoate 2-reductase;protein_id=WP_000705865.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 34129 34620 . + . ID=gene-AD11_RS05300;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AD11_RS05300;old_locus_tag=AD11_0481 NZ_JJLL01000093.1 Protein Homology CDS 34129 34620 . + 0 ID=cds-WP_001138904.1;Parent=gene-AD11_RS05300;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AD11_RS05300;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 34748 36112 . - . ID=gene-AD11_RS05305;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AD11_RS05305;old_locus_tag=AD11_0482 NZ_JJLL01000093.1 Protein Homology CDS 34748 36112 . - 0 ID=cds-WP_001000956.1;Parent=gene-AD11_RS05305;Dbxref=GenBank:WP_001000956.1;Name=WP_001000956.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308508.2;locus_tag=AD11_RS05305;product=MFS transporter;protein_id=WP_001000956.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 36261 37151 . - . ID=gene-AD11_RS05310;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AD11_RS05310;old_locus_tag=AD11_0483 NZ_JJLL01000093.1 Protein Homology CDS 36261 37151 . - 0 ID=cds-WP_000971336.1;Parent=gene-AD11_RS05310;Dbxref=GenBank:WP_000971336.1;Name=WP_000971336.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AD11_RS05310;product=heme o synthase;protein_id=WP_000971336.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 37163 37492 . - . ID=gene-AD11_RS05315;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AD11_RS05315;old_locus_tag=AD11_0484 NZ_JJLL01000093.1 Protein Homology CDS 37163 37492 . - 0 ID=cds-WP_024236646.1;Parent=gene-AD11_RS05315;Dbxref=GenBank:WP_024236646.1;Name=WP_024236646.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AD11_RS05315;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_024236646.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 37492 38106 . - . ID=gene-AD11_RS05320;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AD11_RS05320;old_locus_tag=AD11_0485 NZ_JJLL01000093.1 Protein Homology CDS 37492 38106 . - 0 ID=cds-WP_000179819.1;Parent=gene-AD11_RS05320;Dbxref=GenBank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AD11_RS05320;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 38096 40087 . - . ID=gene-AD11_RS05325;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AD11_RS05325;old_locus_tag=AD11_0486 NZ_JJLL01000093.1 Protein Homology CDS 38096 40087 . - 0 ID=cds-WP_000467180.1;Parent=gene-AD11_RS05325;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AD11_RS05325;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 40109 41056 . - . ID=gene-AD11_RS05330;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AD11_RS05330;old_locus_tag=AD11_0487 NZ_JJLL01000093.1 Protein Homology CDS 40109 41056 . - 0 ID=cds-WP_001239436.1;Parent=gene-AD11_RS05330;Dbxref=GenBank:WP_001239436.1;Name=WP_001239436.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AD11_RS05330;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239436.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 41516 42991 . - . ID=gene-AD11_RS05335;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AD11_RS05335;old_locus_tag=AD11_0488 NZ_JJLL01000093.1 Protein Homology CDS 41516 42991 . - 0 ID=cds-WP_000098429.1;Parent=gene-AD11_RS05335;Dbxref=GenBank:WP_000098429.1;Name=WP_000098429.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308514.1;locus_tag=AD11_RS05335;product=muropeptide MFS transporter AmpG;protein_id=WP_000098429.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 43035 43613 . - . ID=gene-AD11_RS05340;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AD11_RS05340;old_locus_tag=AD11_0489 NZ_JJLL01000093.1 Protein Homology CDS 43035 43613 . - 0 ID=cds-WP_001295326.1;Parent=gene-AD11_RS05340;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AD11_RS05340;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 43918 44235 . + . ID=gene-AD11_RS05345;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AD11_RS05345;old_locus_tag=AD11_0490 NZ_JJLL01000093.1 Protein Homology CDS 43918 44235 . + 0 ID=cds-WP_000973448.1;Parent=gene-AD11_RS05345;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AD11_RS05345;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 44579 45877 . + . ID=gene-AD11_RS05355;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AD11_RS05355;old_locus_tag=AD11_0492 NZ_JJLL01000093.1 Protein Homology CDS 44579 45877 . + 0 ID=cds-WP_001198386.1;Parent=gene-AD11_RS05355;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AD11_RS05355;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 46123 46746 . + . ID=gene-AD11_RS05360;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AD11_RS05360;old_locus_tag=AD11_0493 NZ_JJLL01000093.1 Protein Homology CDS 46123 46746 . + 0 ID=cds-WP_000122253.1;Parent=gene-AD11_RS05360;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AD11_RS05360;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 46872 48146 . + . ID=gene-AD11_RS05365;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AD11_RS05365;old_locus_tag=AD11_0494 NZ_JJLL01000093.1 Protein Homology CDS 46872 48146 . + 0 ID=cds-WP_000130305.1;Parent=gene-AD11_RS05365;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AD11_RS05365;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 48334 50688 . + . ID=gene-AD11_RS05370;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AD11_RS05370;old_locus_tag=AD11_0495 NZ_JJLL01000093.1 Protein Homology CDS 48334 50688 . + 0 ID=cds-WP_001295325.1;Parent=gene-AD11_RS05370;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AD11_RS05370;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 50879 51169 . + . ID=gene-AD11_RS05375;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AD11_RS05375;old_locus_tag=AD11_0496 NZ_JJLL01000093.1 Protein Homology CDS 50879 51169 . + 0 ID=cds-WP_254892905.1;Parent=gene-AD11_RS05375;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=AD11_RS05375;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 51361 53232 . + . ID=gene-AD11_RS05380;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AD11_RS05380;old_locus_tag=AD11_0497 NZ_JJLL01000093.1 Protein Homology CDS 51361 53232 . + 0 ID=cds-WP_000969372.1;Parent=gene-AD11_RS05380;Dbxref=GenBank:WP_000969372.1;Name=WP_000969372.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AD11_RS05380;product=peptidylprolyl isomerase;protein_id=WP_000969372.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 53383 53754 . + . ID=gene-AD11_RS05385;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AD11_RS05385;old_locus_tag=AD11_0498 NZ_JJLL01000093.1 Protein Homology CDS 53383 53754 . + 0 ID=cds-WP_000680312.1;Parent=gene-AD11_RS05385;Dbxref=GenBank:WP_000680312.1;Name=WP_000680312.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AD11_RS05385;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680312.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 53848 54246 . + . ID=gene-AD11_RS05390;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AD11_RS05390;old_locus_tag=AD11_0499 NZ_JJLL01000093.1 Protein Homology CDS 53848 54246 . + 0 ID=cds-WP_001194534.1;Parent=gene-AD11_RS05390;Dbxref=GenBank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AD11_RS05390;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 54298 54993 . - . ID=gene-AD11_RS05395;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AD11_RS05395;old_locus_tag=AD11_0500 NZ_JJLL01000093.1 Protein Homology CDS 54298 54993 . - 0 ID=cds-WP_000817220.1;Parent=gene-AD11_RS05395;Dbxref=GenBank:WP_000817220.1;Name=WP_000817220.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414978.1;locus_tag=AD11_RS05395;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817220.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 55058 56758 . - . ID=gene-AD11_RS05400;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AD11_RS05400;old_locus_tag=AD11_0501 NZ_JJLL01000093.1 Protein Homology CDS 55058 56758 . - 0 ID=cds-WP_001238231.1;Parent=gene-AD11_RS05400;Dbxref=GenBank:WP_001238231.1;Name=WP_001238231.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308526.1;locus_tag=AD11_RS05400;product=SgrR family transcriptional regulator;protein_id=WP_001238231.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 56858 57676 . + . ID=gene-AD11_RS05405;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AD11_RS05405;old_locus_tag=AD11_0502 NZ_JJLL01000093.1 Protein Homology CDS 56858 57676 . + 0 ID=cds-WP_000113027.1;Parent=gene-AD11_RS05405;Dbxref=GenBank:WP_000113027.1;Name=WP_000113027.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AD11_RS05405;product=HMP-PP phosphatase;protein_id=WP_000113027.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 57829 58287 . + . ID=gene-AD11_RS05410;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AD11_RS05410;old_locus_tag=AD11_0503 NZ_JJLL01000093.1 Protein Homology CDS 57829 58287 . + 0 ID=cds-WP_000884589.1;Parent=gene-AD11_RS05410;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AD11_RS05410;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 58317 60089 . + . ID=gene-AD11_RS05415;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AD11_RS05415;old_locus_tag=AD11_0504 NZ_JJLL01000093.1 Protein Homology CDS 58317 60089 . + 0 ID=cds-WP_001235622.1;Parent=gene-AD11_RS05415;Dbxref=GenBank:WP_001235622.1;Name=WP_001235622.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308529.1;locus_tag=AD11_RS05415;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235622.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 60082 61863 . + . ID=gene-AD11_RS05420;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AD11_RS05420;old_locus_tag=AD11_0505 NZ_JJLL01000093.1 Protein Homology CDS 60082 61863 . + 0 ID=cds-WP_001256201.1;Parent=gene-AD11_RS05420;Dbxref=GenBank:WP_001256201.1;Name=WP_001256201.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AD11_RS05420;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_001256201.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 62044 62382 . + . ID=gene-AD11_RS05425;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AD11_RS05425;old_locus_tag=AD11_0507 NZ_JJLL01000093.1 Protein Homology CDS 62044 62382 . + 0 ID=cds-WP_000780338.1;Parent=gene-AD11_RS05425;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AD11_RS05425;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 62412 63698 . + . ID=gene-AD11_RS05430;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AD11_RS05430;old_locus_tag=AD11_0508 NZ_JJLL01000093.1 Protein Homology CDS 62412 63698 . + 0 ID=cds-WP_000685029.1;Parent=gene-AD11_RS05430;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AD11_RS05430;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 63747 64607 . - . ID=gene-AD11_RS05435;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AD11_RS05435;old_locus_tag=AD11_0509 NZ_JJLL01000093.1 Protein Homology CDS 63747 64607 . - 0 ID=cds-WP_000075876.1;Parent=gene-AD11_RS05435;Dbxref=GenBank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AD11_RS05435;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 64825 65397 . + . ID=gene-AD11_RS05440;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AD11_RS05440;old_locus_tag=AD11_0511 NZ_JJLL01000093.1 Protein Homology CDS 64825 65397 . + 0 ID=cds-WP_000779831.1;Parent=gene-AD11_RS05440;Dbxref=GenBank:WP_000779831.1;Name=WP_000779831.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AD11_RS05440;product=YbaY family lipoprotein;protein_id=WP_000779831.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 65428 65739 . - . ID=gene-AD11_RS05445;Name=AD11_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05445;old_locus_tag=AD11_0512 NZ_JJLL01000093.1 Protein Homology CDS 65428 65739 . - 0 ID=cds-WP_000409911.1;Parent=gene-AD11_RS05445;Dbxref=GenBank:WP_000409911.1;Name=WP_000409911.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AD11_RS05445;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 65902 65998 . + . ID=gene-AD11_RS27565;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AD11_RS27565 NZ_JJLL01000093.1 cmsearch SRP_RNA 65902 65998 . + . ID=rna-AD11_RS27565;Parent=gene-AD11_RS27565;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27565;product=signal recognition particle sRNA small type NZ_JJLL01000093.1 cmsearch exon 65902 65998 . + . ID=exon-AD11_RS27565-1;Parent=rna-AD11_RS27565;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27565;product=signal recognition particle sRNA small type NZ_JJLL01000093.1 RefSeq gene 66118 66471 . + . ID=gene-AD11_RS05450;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AD11_RS05450;old_locus_tag=AD11_0513 NZ_JJLL01000093.1 Protein Homology CDS 66118 66471 . + 0 ID=cds-WP_000878140.1;Parent=gene-AD11_RS05450;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AD11_RS05450;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 66513 68063 . - . ID=gene-AD11_RS05455;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AD11_RS05455;old_locus_tag=AD11_0514 NZ_JJLL01000093.1 Protein Homology CDS 66513 68063 . - 0 ID=cds-WP_032083478.1;Parent=gene-AD11_RS05455;Dbxref=GenBank:WP_032083478.1;Name=WP_032083478.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308537.2;locus_tag=AD11_RS05455;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_032083478.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 68227 68697 . - . ID=gene-AD11_RS05460;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AD11_RS05460;old_locus_tag=AD11_0515 NZ_JJLL01000093.1 Protein Homology CDS 68227 68697 . - 0 ID=cds-WP_000136192.1;Parent=gene-AD11_RS05460;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AD11_RS05460;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 68813 69364 . - . ID=gene-AD11_RS05465;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AD11_RS05465;old_locus_tag=AD11_0516 NZ_JJLL01000093.1 Protein Homology CDS 68813 69364 . - 0 ID=cds-WP_000102564.1;Parent=gene-AD11_RS05465;Dbxref=GenBank:WP_000102564.1;Name=WP_000102564.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AD11_RS05465;product=maltose O-acetyltransferase;protein_id=WP_000102564.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 69536 69754 . - . ID=gene-AD11_RS05470;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AD11_RS05470;old_locus_tag=AD11_0517 NZ_JJLL01000093.1 Protein Homology CDS 69536 69754 . - 0 ID=cds-WP_001291435.1;Parent=gene-AD11_RS05470;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AD11_RS05470;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 69780 70154 . - . ID=gene-AD11_RS05475;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AD11_RS05475;old_locus_tag=AD11_0518 NZ_JJLL01000093.1 Protein Homology CDS 69780 70154 . - 0 ID=cds-WP_000344800.1;Parent=gene-AD11_RS05475;Dbxref=GenBank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AD11_RS05475;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 70700 73849 . - . ID=gene-AD11_RS05480;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AD11_RS05480;old_locus_tag=AD11_0519 NZ_JJLL01000093.1 Protein Homology CDS 70700 73849 . - 0 ID=cds-WP_001132469.1;Parent=gene-AD11_RS05480;Dbxref=GenBank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AD11_RS05480;product=efflux RND transporter permease AcrB;protein_id=WP_001132469.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 73872 75065 . - . ID=gene-AD11_RS05485;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AD11_RS05485;old_locus_tag=AD11_0520 NZ_JJLL01000093.1 Protein Homology CDS 73872 75065 . - 0 ID=cds-WP_001295324.1;Parent=gene-AD11_RS05485;Dbxref=GenBank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AD11_RS05485;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 75207 75854 . + . ID=gene-AD11_RS05490;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AD11_RS05490;old_locus_tag=AD11_0521 NZ_JJLL01000093.1 Protein Homology CDS 75207 75854 . + 0 ID=cds-WP_000101737.1;Parent=gene-AD11_RS05490;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AD11_RS05490;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 75982 79344 . + . ID=gene-AD11_RS05495;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AD11_RS05495;old_locus_tag=AD11_0522 NZ_JJLL01000093.1 Protein Homology CDS 75982 79344 . + 0 ID=cds-WP_000177732.1;Parent=gene-AD11_RS05495;Dbxref=GenBank:WP_000177732.1;Name=WP_000177732.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414998.1;locus_tag=AD11_RS05495;product=mechanosensitive channel MscK;protein_id=WP_000177732.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 79556 79717 . - . ID=gene-AD11_RS05505;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AD11_RS05505;old_locus_tag=AD11_0523 NZ_JJLL01000093.1 Protein Homology CDS 79556 79717 . - 0 ID=cds-WP_000051153.1;Parent=gene-AD11_RS05505;Dbxref=GenBank:WP_000051153.1;Name=WP_000051153.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AD11_RS05505;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051153.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 79731 80258 . - . ID=gene-AD11_RS05510;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AD11_RS05510;old_locus_tag=AD11_0524 NZ_JJLL01000093.1 Protein Homology CDS 79731 80258 . - 0 ID=cds-WP_000844874.1;Parent=gene-AD11_RS05510;Dbxref=GenBank:WP_000844874.1;Name=WP_000844874.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AD11_RS05510;product=primosomal replication protein N'';protein_id=WP_000844874.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 80328 80705 . + . ID=gene-AD11_RS05515;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AD11_RS05515;old_locus_tag=AD11_0525 NZ_JJLL01000093.1 Protein Homology CDS 80328 80705 . + 0 ID=cds-WP_001188905.1;Parent=gene-AD11_RS05515;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AD11_RS05515;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 80858 81409 . + . ID=gene-AD11_RS05520;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AD11_RS05520;old_locus_tag=AD11_0526 NZ_JJLL01000093.1 Protein Homology CDS 80858 81409 . + 0 ID=cds-WP_000127356.1;Parent=gene-AD11_RS05520;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AD11_RS05520;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 81538 83469 . + . ID=gene-AD11_RS05525;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AD11_RS05525;old_locus_tag=AD11_0527 NZ_JJLL01000093.1 Protein Homology CDS 81538 83469 . + 0 ID=cds-WP_000122013.1;Parent=gene-AD11_RS05525;Dbxref=GenBank:WP_000122013.1;Name=WP_000122013.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415003.1;locus_tag=AD11_RS05525;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122013.1;transl_table=11 NZ_JJLL01000093.1 cmsearch sequence_feature 82802 82866 . + . ID=id-AD11_RS05525;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS05525 NZ_JJLL01000093.1 RefSeq gene 83522 83851 . + . ID=gene-AD11_RS05530;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AD11_RS05530;old_locus_tag=AD11_0528 NZ_JJLL01000093.1 Protein Homology CDS 83522 83851 . + 0 ID=cds-WP_000467098.1;Parent=gene-AD11_RS05530;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AD11_RS05530;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 83851 84456 . + . ID=gene-AD11_RS05535;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AD11_RS05535;old_locus_tag=AD11_0529 NZ_JJLL01000093.1 Protein Homology CDS 83851 84456 . + 0 ID=cds-WP_001195025.1;Parent=gene-AD11_RS05535;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AD11_RS05535;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 84566 86440 . + . ID=gene-AD11_RS05540;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AD11_RS05540;old_locus_tag=AD11_0530 NZ_JJLL01000093.1 Protein Homology CDS 84566 86440 . + 0 ID=cds-WP_000678201.1;Parent=gene-AD11_RS05540;Dbxref=GenBank:WP_000678201.1;Name=WP_000678201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AD11_RS05540;product=molecular chaperone HtpG;protein_id=WP_000678201.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 86621 87265 . + . ID=gene-AD11_RS05545;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AD11_RS05545;old_locus_tag=AD11_0532 NZ_JJLL01000093.1 Protein Homology CDS 86621 87265 . + 0 ID=cds-WP_001220233.1;Parent=gene-AD11_RS05545;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AD11_RS05545;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 87501 88463 . + . ID=gene-AD11_RS05550;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AD11_RS05550;old_locus_tag=AD11_0533 NZ_JJLL01000093.1 Protein Homology CDS 87501 88463 . + 0 ID=cds-WP_001250103.1;Parent=gene-AD11_RS05550;Dbxref=GenBank:WP_001250103.1;Name=WP_001250103.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415008.1;locus_tag=AD11_RS05550;product=ferrochelatase;protein_id=WP_001250103.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 88460 89419 . - . ID=gene-AD11_RS05555;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AD11_RS05555;old_locus_tag=AD11_0534 NZ_JJLL01000093.1 Protein Homology CDS 88460 89419 . - 0 ID=cds-WP_000801813.1;Parent=gene-AD11_RS05555;Dbxref=GenBank:WP_000801813.1;Name=WP_000801813.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AD11_RS05555;product=acetyl esterase;protein_id=WP_000801813.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 89571 90875 . + . ID=gene-AD11_RS05560;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AD11_RS05560;old_locus_tag=AD11_0535 NZ_JJLL01000093.1 Protein Homology CDS 89571 90875 . + 0 ID=cds-WP_000671574.1;Parent=gene-AD11_RS05560;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AD11_RS05560;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 91008 92684 . - . ID=gene-AD11_RS05565;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AD11_RS05565;old_locus_tag=AD11_0536 NZ_JJLL01000093.1 Protein Homology CDS 91008 92684 . - 0 ID=cds-WP_000546234.1;Parent=gene-AD11_RS05565;Dbxref=GenBank:WP_000546234.1;Name=WP_000546234.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308558.1;locus_tag=AD11_RS05565;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546234.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 92922 94142 . - . ID=gene-AD11_RS05570;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AD11_RS05570;old_locus_tag=AD11_0537 NZ_JJLL01000093.1 Protein Homology CDS 92922 94142 . - 0 ID=cds-WP_032083468.1;Parent=gene-AD11_RS05570;Dbxref=GenBank:WP_032083468.1;Name=WP_032083468.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415012.1;locus_tag=AD11_RS05570;product=fosmidomycin MFS transporter;protein_id=WP_032083468.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 94360 96012 . + . ID=gene-AD11_RS05575;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AD11_RS05575;old_locus_tag=AD11_0538 NZ_JJLL01000093.1 Protein Homology CDS 94360 96012 . + 0 ID=cds-WP_000771748.1;Parent=gene-AD11_RS05575;Dbxref=GenBank:WP_000771748.1;Name=WP_000771748.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415013.1;locus_tag=AD11_RS05575;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_000771748.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 96049 96528 . - . ID=gene-AD11_RS05580;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AD11_RS05580;old_locus_tag=AD11_0539 NZ_JJLL01000093.1 Protein Homology CDS 96049 96528 . - 0 ID=cds-WP_000186631.1;Parent=gene-AD11_RS05580;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AD11_RS05580;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 96732 97526 . - . ID=gene-AD11_RS05585;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AD11_RS05585;old_locus_tag=AD11_0540 NZ_JJLL01000093.1 Protein Homology CDS 96732 97526 . - 0 ID=cds-WP_000365173.1;Parent=gene-AD11_RS05585;Dbxref=GenBank:WP_000365173.1;Name=WP_000365173.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AD11_RS05585;product=TraB/GumN family protein;protein_id=WP_000365173.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 97664 98005 . + . ID=gene-AD11_RS05590;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AD11_RS05590;old_locus_tag=AD11_0541 NZ_JJLL01000093.1 Protein Homology CDS 97664 98005 . + 0 ID=cds-WP_000806442.1;Parent=gene-AD11_RS05590;Dbxref=GenBank:WP_000806442.1;Name=WP_000806442.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AD11_RS05590;product=HigA family addiction module antitoxin;protein_id=WP_000806442.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 98220 100724 . - . ID=gene-AD11_RS05595;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AD11_RS05595;old_locus_tag=AD11_0542 NZ_JJLL01000093.1 Protein Homology CDS 98220 100724 . - 0 ID=cds-WP_032083467.1;Parent=gene-AD11_RS05595;Dbxref=GenBank:WP_032083467.1;Name=WP_032083467.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415017.1;locus_tag=AD11_RS05595;product=copper-exporting P-type ATPase CopA;protein_id=WP_032083467.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 100986 101918 . + . ID=gene-AD11_RS05600;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AD11_RS05600;old_locus_tag=AD11_0543 NZ_JJLL01000093.1 Protein Homology CDS 100986 101918 . + 0 ID=cds-WP_000883011.1;Parent=gene-AD11_RS05600;Dbxref=GenBank:WP_000883011.1;Name=WP_000883011.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706378.1;locus_tag=AD11_RS05600;product=glutaminase A;protein_id=WP_000883011.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 101921 103213 . + . ID=gene-AD11_RS05605;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AD11_RS05605;old_locus_tag=AD11_0544 NZ_JJLL01000093.1 Protein Homology CDS 101921 103213 . + 0 ID=cds-WP_000982172.1;Parent=gene-AD11_RS05605;Dbxref=GenBank:WP_000982172.1;Name=WP_000982172.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415019.1;locus_tag=AD11_RS05605;product=APC family permease;protein_id=WP_000982172.1;transl_table=11 NZ_JJLL01000093.1 RefSeq pseudogene 103244 103341 . + . ID=gene-AD11_RS32460;Name=AD11_RS32460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32460;partial=true;pseudo=true;start_range=.,103244 NZ_JJLL01000093.1 Protein Homology CDS 103244 103341 . + 0 ID=cds-AD11_RS32460;Parent=gene-AD11_RS32460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AD11_RS32460;partial=true;product=hypothetical protein;pseudo=true;start_range=.,103244;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 103338 103745 . + . ID=gene-AD11_RS05610;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AD11_RS05610;old_locus_tag=AD11_0545 NZ_JJLL01000093.1 Protein Homology CDS 103338 103745 . + 0 ID=cds-WP_001026747.1;Parent=gene-AD11_RS05610;Dbxref=GenBank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AD11_RS05610;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 103746 104204 . - . ID=gene-AD11_RS05615;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AD11_RS05615;old_locus_tag=AD11_0546 NZ_JJLL01000093.1 Protein Homology CDS 103746 104204 . - 0 ID=cds-WP_000970323.1;Parent=gene-AD11_RS05615;Dbxref=GenBank:WP_000970323.1;Name=WP_000970323.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AD11_RS05615;product=NfeD family protein;protein_id=WP_000970323.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 104201 105118 . - . ID=gene-AD11_RS05620;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=AD11_RS05620;old_locus_tag=AD11_0547 NZ_JJLL01000093.1 Protein Homology CDS 104201 105118 . - 0 ID=cds-WP_000904502.1;Parent=gene-AD11_RS05620;Dbxref=GenBank:WP_000904502.1;Name=WP_000904502.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AD11_RS05620;product=SPFH domain-containing protein;protein_id=WP_000904502.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 105264 105941 . + . ID=gene-AD11_RS05625;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AD11_RS05625;old_locus_tag=AD11_0548 NZ_JJLL01000093.1 Protein Homology CDS 105264 105941 . + 0 ID=cds-WP_001157540.1;Parent=gene-AD11_RS05625;Dbxref=GenBank:WP_001157540.1;Name=WP_001157540.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415023.1;locus_tag=AD11_RS05625;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_001157540.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 105928 106707 . + . ID=gene-AD11_RS05630;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AD11_RS05630;old_locus_tag=AD11_0549 NZ_JJLL01000093.1 Protein Homology CDS 105928 106707 . + 0 ID=cds-WP_001295323.1;Parent=gene-AD11_RS05630;Dbxref=GenBank:WP_001295323.1;Name=WP_001295323.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AD11_RS05630;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_001295323.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 106770 107624 . - . ID=gene-AD11_RS05635;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AD11_RS05635;old_locus_tag=AD11_0550 NZ_JJLL01000093.1 Protein Homology CDS 106770 107624 . - 0 ID=cds-WP_001300573.1;Parent=gene-AD11_RS05635;Dbxref=GenBank:WP_001300573.1;Name=WP_001300573.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415025.4;locus_tag=AD11_RS05635;product=chaperedoxin;protein_id=WP_001300573.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 107685 108494 . - . ID=gene-AD11_RS05640;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AD11_RS05640;old_locus_tag=AD11_0551 NZ_JJLL01000093.1 Protein Homology CDS 107685 108494 . - 0 ID=cds-WP_000148959.1;Parent=gene-AD11_RS05640;Dbxref=GenBank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AD11_RS05640;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 108484 109107 . - . ID=gene-AD11_RS05645;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AD11_RS05645;old_locus_tag=AD11_0552 NZ_JJLL01000093.1 Protein Homology CDS 108484 109107 . - 0 ID=cds-WP_001295836.1;Parent=gene-AD11_RS05645;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AD11_RS05645;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 109078 109764 . + . ID=gene-AD11_RS05650;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AD11_RS05650;old_locus_tag=AD11_0553 NZ_JJLL01000093.1 Protein Homology CDS 109078 109764 . + 0 ID=cds-WP_001110562.1;Parent=gene-AD11_RS05650;Dbxref=GenBank:WP_001110562.1;Name=WP_001110562.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AD11_RS05650;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110562.1;transl_table=11 NZ_JJLL01000093.1 RefSeq gene 109761 112175 . + . ID=gene-AD11_RS05655;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AD11_RS05655;old_locus_tag=AD11_0554 NZ_JJLL01000093.1 Protein Homology CDS 109761 112175 . + 0 ID=cds-WP_000561866.1;Parent=gene-AD11_RS05655;Dbxref=GenBank:WP_000561866.1;Name=WP_000561866.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AD11_RS05655;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561866.1;transl_table=11 NZ_JJLL01000093.1 RefSeq pseudogene 112606 114774 . + . ID=gene-AD11_RS05660;Name=rhsD;end_range=114774,.;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AD11_RS05660;old_locus_tag=AD11_0555;partial=true;pseudo=true NZ_JJLL01000093.1 Protein Homology CDS 112606 114774 . + 0 ID=cds-AD11_RS05660;Parent=gene-AD11_RS05660;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=114774,.;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AD11_RS05660;partial=true;product=rhs element protein RhsD;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000094.1 1 39898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000094.1 RefSeq region 1 39898 . + . ID=NZ_JJLL01000094.1:1..39898;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000094.1 RefSeq pseudogene 1 2372 . + . ID=gene-AD11_RS28595;Name=rhsD;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AD11_RS28595;old_locus_tag=AD11_0558;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000094.1 Protein Homology CDS 1 2372 . + 0 ID=cds-AD11_RS28595;Parent=gene-AD11_RS28595;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AD11_RS28595;partial=true;product=rhs element protein RhsD;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 2412 2780 . + . ID=gene-AD11_RS05670;Name=ybbC;gbkey=Gene;gene=ybbC;gene_biotype=protein_coding;locus_tag=AD11_RS05670;old_locus_tag=AD11_0559 NZ_JJLL01000094.1 Protein Homology CDS 2412 2780 . + 0 ID=cds-WP_000877768.1;Parent=gene-AD11_RS05670;Dbxref=GenBank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;gene=ybbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415031.1;locus_tag=AD11_RS05670;product=YbbC/YhhH family protein;protein_id=WP_000877768.1;transl_table=11 NZ_JJLL01000094.1 RefSeq pseudogene 2783 3490 . + . ID=gene-AD11_RS05675;Name=AD11_RS05675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS05675;old_locus_tag=AD11_0560;partial=true;pseudo=true;start_range=.,2783 NZ_JJLL01000094.1 Protein Homology CDS 2783 3490 . + 0 ID=cds-AD11_RS05675;Parent=gene-AD11_RS05675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AD11_RS05675;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2783;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 3471 3731 . + . ID=gene-AD11_RS30545;Name=AD11_RS30545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS30545 NZ_JJLL01000094.1 Protein Homology CDS 3471 3731 . + 0 ID=cds-WP_001320180.1;Parent=gene-AD11_RS30545;Dbxref=GenBank:WP_001320180.1;Name=WP_001320180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308588.1;locus_tag=AD11_RS30545;product=hypothetical protein;protein_id=WP_001320180.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 3788 3961 . + . ID=gene-AD11_RS32010;Name=AD11_RS32010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32010 NZ_JJLL01000094.1 Protein Homology CDS 3788 3961 . + 0 ID=cds-WP_001297301.1;Parent=gene-AD11_RS32010;Dbxref=GenBank:WP_001297301.1;Name=WP_001297301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297301.1;locus_tag=AD11_RS32010;product=hypothetical protein;protein_id=WP_001297301.1;transl_table=11 NZ_JJLL01000094.1 RefSeq pseudogene 4328 4423 . + . ID=gene-AD11_RS33155;Name=AD11_RS33155;end_range=4423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33155;partial=true;pseudo=true NZ_JJLL01000094.1 Protein Homology CDS 4328 4423 . + 0 ID=cds-AD11_RS33155;Parent=gene-AD11_RS33155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AD11_RS33155;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000094.1 RefSeq pseudogene 4482 4847 . - . ID=gene-AD11_RS05685;Name=ylbG;gbkey=Gene;gene=ylbG;gene_biotype=pseudogene;locus_tag=AD11_RS05685;old_locus_tag=AD11_0561;partial=true;pseudo=true;start_range=.,4482 NZ_JJLL01000094.1 Protein Homology CDS 4482 4847 . - 0 ID=cds-AD11_RS05685;Parent=gene-AD11_RS05685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ylbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AD11_RS05685;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,4482;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 4963 6057 . - . ID=gene-AD11_RS05690;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AD11_RS05690;old_locus_tag=AD11_0562 NZ_JJLL01000094.1 Protein Homology CDS 4963 6057 . - 0 ID=cds-WP_001157938.1;Parent=gene-AD11_RS05690;Dbxref=GenBank:WP_001157938.1;Name=WP_001157938.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415036.1;locus_tag=AD11_RS05690;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001157938.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 6126 7052 . - . ID=gene-AD11_RS05695;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AD11_RS05695;old_locus_tag=AD11_0563 NZ_JJLL01000094.1 Protein Homology CDS 6126 7052 . - 0 ID=cds-WP_000460145.1;Parent=gene-AD11_RS05695;Dbxref=GenBank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AD11_RS05695;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11 NZ_JJLL01000094.1 RefSeq pseudogene 7282 7764 . + . ID=gene-AD11_RS05700;Name=allA;gbkey=Gene;gene=allA;gene_biotype=pseudogene;locus_tag=AD11_RS05700;old_locus_tag=AD11_0564;pseudo=true NZ_JJLL01000094.1 Protein Homology CDS 7282 7764 . + 0 ID=cds-AD11_RS05700;Parent=gene-AD11_RS05700;Note=internal stop;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AD11_RS05700;product=ureidoglycolate lyase;pseudo=true;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 7842 8657 . + . ID=gene-AD11_RS05705;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AD11_RS05705;old_locus_tag=AD11_0565 NZ_JJLL01000094.1 Protein Homology CDS 7842 8657 . + 0 ID=cds-WP_000141275.1;Parent=gene-AD11_RS05705;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AD11_RS05705;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 8747 10528 . + . ID=gene-AD11_RS05710;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AD11_RS05710;old_locus_tag=AD11_0566 NZ_JJLL01000094.1 Protein Homology CDS 8747 10528 . + 0 ID=cds-WP_001481366.1;Parent=gene-AD11_RS05710;Dbxref=GenBank:WP_001481366.1;Name=WP_001481366.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AD11_RS05710;product=glyoxylate carboligase;protein_id=WP_001481366.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 10541 11317 . + . ID=gene-AD11_RS05715;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AD11_RS05715;old_locus_tag=AD11_0567 NZ_JJLL01000094.1 Protein Homology CDS 10541 11317 . + 0 ID=cds-WP_000943544.1;Parent=gene-AD11_RS05715;Dbxref=GenBank:WP_000943544.1;Name=WP_000943544.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415041.1;locus_tag=AD11_RS05715;product=hydroxypyruvate isomerase;protein_id=WP_000943544.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 11417 12295 . + . ID=gene-AD11_RS05720;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AD11_RS05720;old_locus_tag=AD11_0568 NZ_JJLL01000094.1 Protein Homology CDS 11417 12295 . + 0 ID=cds-WP_000765839.1;Parent=gene-AD11_RS05720;Dbxref=GenBank:WP_000765839.1;Name=WP_000765839.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AD11_RS05720;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 12464 13918 . + . ID=gene-AD11_RS05725;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AD11_RS05725;old_locus_tag=AD11_0569 NZ_JJLL01000094.1 Protein Homology CDS 12464 13918 . + 0 ID=cds-WP_000401100.1;Parent=gene-AD11_RS05725;Dbxref=GenBank:WP_000401100.1;Name=WP_000401100.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AD11_RS05725;product=allantoin transporter;protein_id=WP_000401100.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 13978 15339 . + . ID=gene-AD11_RS05730;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AD11_RS05730;old_locus_tag=AD11_0570 NZ_JJLL01000094.1 Protein Homology CDS 13978 15339 . + 0 ID=cds-WP_000006900.1;Parent=gene-AD11_RS05730;Dbxref=GenBank:WP_000006900.1;Name=WP_000006900.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AD11_RS05730;product=allantoinase AllB;protein_id=WP_000006900.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 15396 16697 . + . ID=gene-AD11_RS05735;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=AD11_RS05735;old_locus_tag=AD11_0571 NZ_JJLL01000094.1 Protein Homology CDS 15396 16697 . + 0 ID=cds-WP_001302767.1;Parent=gene-AD11_RS05735;Dbxref=GenBank:WP_001302767.1;Name=WP_001302767.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AD11_RS05735;product=uracil/xanthine transporter;protein_id=WP_001302767.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 16719 17864 . + . ID=gene-AD11_RS05740;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AD11_RS05740;old_locus_tag=AD11_0572 NZ_JJLL01000094.1 Protein Homology CDS 16719 17864 . + 0 ID=cds-WP_000706344.1;Parent=gene-AD11_RS05740;Dbxref=GenBank:WP_000706344.1;Name=WP_000706344.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AD11_RS05740;product=glycerate 3-kinase;protein_id=WP_000706344.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 18092 18877 . - . ID=gene-AD11_RS05745;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AD11_RS05745;old_locus_tag=AD11_0573 NZ_JJLL01000094.1 Protein Homology CDS 18092 18877 . - 0 ID=cds-WP_000540943.1;Parent=gene-AD11_RS05745;Dbxref=GenBank:WP_000540943.1;Name=WP_000540943.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308604.1;locus_tag=AD11_RS05745;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540943.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 18888 20123 . - . ID=gene-AD11_RS05750;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AD11_RS05750;old_locus_tag=AD11_0574 NZ_JJLL01000094.1 Protein Homology CDS 18888 20123 . - 0 ID=cds-WP_001624777.1;Parent=gene-AD11_RS05750;Dbxref=GenBank:WP_001624777.1;Name=WP_001624777.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AD11_RS05750;product=allantoate deiminase;protein_id=WP_001624777.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 20145 21194 . - . ID=gene-AD11_RS05755;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AD11_RS05755;old_locus_tag=AD11_0575 NZ_JJLL01000094.1 Protein Homology CDS 20145 21194 . - 0 ID=cds-WP_000703889.1;Parent=gene-AD11_RS05755;Dbxref=GenBank:WP_000703889.1;Name=WP_000703889.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308606.1;locus_tag=AD11_RS05755;product=ureidoglycolate dehydrogenase;protein_id=WP_000703889.1;transl_table=11 NZ_JJLL01000094.1 RefSeq pseudogene 21511 23178 . + . ID=gene-AD11_RS05760;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=pseudogene;locus_tag=AD11_RS05760;old_locus_tag=AD11_0577;pseudo=true NZ_JJLL01000094.1 Protein Homology CDS 21511 23178 . + 0 ID=cds-AD11_RS05760;Parent=gene-AD11_RS05760;Note=internal stop;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308607.1;locus_tag=AD11_RS05760;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 23188 24447 . + . ID=gene-AD11_RS05765;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AD11_RS05765;old_locus_tag=AD11_0578 NZ_JJLL01000094.1 Protein Homology CDS 23188 24447 . + 0 ID=cds-WP_000495365.1;Parent=gene-AD11_RS05765;Dbxref=GenBank:WP_000495365.1;Name=WP_000495365.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AD11_RS05765;product=DUF1116 domain-containing protein;protein_id=WP_000495365.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 24458 25273 . + . ID=gene-AD11_RS05770;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AD11_RS05770;old_locus_tag=AD11_0579 NZ_JJLL01000094.1 Protein Homology CDS 24458 25273 . + 0 ID=cds-WP_033865241.1;Parent=gene-AD11_RS05770;Dbxref=GenBank:WP_033865241.1;Name=WP_033865241.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AD11_RS05770;product=DUF2877 domain-containing protein;protein_id=WP_033865241.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 25270 26163 . + . ID=gene-AD11_RS05775;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AD11_RS05775;old_locus_tag=AD11_0580 NZ_JJLL01000094.1 Protein Homology CDS 25270 26163 . + 0 ID=cds-WP_000855388.1;Parent=gene-AD11_RS05775;Dbxref=GenBank:WP_000855388.1;Name=WP_000855388.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AD11_RS05775;product=carbamate kinase;protein_id=WP_000855388.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 26358 27425 . - . ID=gene-AD11_RS05780;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AD11_RS05780;old_locus_tag=AD11_0581 NZ_JJLL01000094.1 Protein Homology CDS 26358 27425 . - 0 ID=cds-WP_000815566.1;Parent=gene-AD11_RS05780;Dbxref=GenBank:WP_000815566.1;Name=WP_000815566.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415055.1;locus_tag=AD11_RS05780;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815566.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 27422 27931 . - . ID=gene-AD11_RS05785;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AD11_RS05785;old_locus_tag=AD11_0582 NZ_JJLL01000094.1 Protein Homology CDS 27422 27931 . - 0 ID=cds-WP_001351650.1;Parent=gene-AD11_RS05785;Dbxref=GenBank:WP_001351650.1;Name=WP_001351650.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AD11_RS05785;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001351650.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 28049 28771 . - . ID=gene-AD11_RS05790;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AD11_RS05790;old_locus_tag=AD11_0583 NZ_JJLL01000094.1 Protein Homology CDS 28049 28771 . - 0 ID=cds-WP_000212252.1;Parent=gene-AD11_RS05790;Dbxref=GenBank:WP_000212252.1;Name=WP_000212252.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706402.1;locus_tag=AD11_RS05790;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212252.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 28774 29268 . - . ID=gene-AD11_RS05795;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AD11_RS05795;old_locus_tag=AD11_0584 NZ_JJLL01000094.1 Protein Homology CDS 28774 29268 . - 0 ID=cds-WP_000255997.1;Parent=gene-AD11_RS05795;Dbxref=GenBank:WP_000255997.1;Name=WP_000255997.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AD11_RS05795;product=peptidylprolyl isomerase B;protein_id=WP_000255997.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 29442 30827 . + . ID=gene-AD11_RS05800;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AD11_RS05800;old_locus_tag=AD11_0585 NZ_JJLL01000094.1 Protein Homology CDS 29442 30827 . + 0 ID=cds-WP_000912345.1;Parent=gene-AD11_RS05800;Dbxref=GenBank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AD11_RS05800;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 30866 31384 . - . ID=gene-AD11_RS05805;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=AD11_RS05805;old_locus_tag=AD11_0586 NZ_JJLL01000094.1 Protein Homology CDS 30866 31384 . - 0 ID=cds-WP_033865243.1;Parent=gene-AD11_RS05805;Dbxref=GenBank:WP_033865243.1;Name=WP_033865243.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;gene=ybcI;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308616.1;locus_tag=AD11_RS05805;product=metal-dependent hydrolase;protein_id=WP_033865243.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 31492 31704 . - . ID=gene-AD11_RS05810;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AD11_RS05810;old_locus_tag=AD11_0587 NZ_JJLL01000094.1 Protein Homology CDS 31492 31704 . - 0 ID=cds-WP_000190288.1;Parent=gene-AD11_RS05810;Dbxref=GenBank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AD11_RS05810;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 31706 32572 . - . ID=gene-AD11_RS05815;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AD11_RS05815;old_locus_tag=AD11_0588 NZ_JJLL01000094.1 Protein Homology CDS 31706 32572 . - 0 ID=cds-WP_000729160.1;Parent=gene-AD11_RS05815;Dbxref=GenBank:WP_000729160.1;Name=WP_000729160.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415062.1;locus_tag=AD11_RS05815;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729160.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 33043 33585 . + . ID=gene-AD11_RS05820;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AD11_RS05820;old_locus_tag=AD11_0589 NZ_JJLL01000094.1 Protein Homology CDS 33043 33585 . + 0 ID=cds-WP_000776555.1;Parent=gene-AD11_RS05820;Dbxref=GenBank:WP_000776555.1;Name=WP_000776555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AD11_RS05820;product=type 1 fimbrial major subunit FimA;protein_id=WP_000776555.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 33805 34497 . + . ID=gene-AD11_RS05825;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AD11_RS05825;old_locus_tag=AD11_0591 NZ_JJLL01000094.1 Protein Homology CDS 33805 34497 . + 0 ID=cds-WP_000988365.1;Parent=gene-AD11_RS05825;Dbxref=GenBank:WP_000988365.1;Name=WP_000988365.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AD11_RS05825;product=type 1 fimbria chaperone FimC;protein_id=WP_000988365.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 34528 37137 . + . ID=gene-AD11_RS05830;Name=sfmD;gbkey=Gene;gene=sfmD;gene_biotype=protein_coding;locus_tag=AD11_RS05830;old_locus_tag=AD11_0592 NZ_JJLL01000094.1 Protein Homology CDS 34528 37137 . + 0 ID=cds-WP_001358768.1;Parent=gene-AD11_RS05830;Dbxref=GenBank:WP_001358768.1;Name=WP_001358768.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=sfmD;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AD11_RS05830;product=fimbrial biogenesis usher protein;protein_id=WP_001358768.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 37179 38156 . + . ID=gene-AD11_RS05835;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=AD11_RS05835;old_locus_tag=AD11_0593 NZ_JJLL01000094.1 Protein Homology CDS 37179 38156 . + 0 ID=cds-WP_033865253.1;Parent=gene-AD11_RS05835;Dbxref=GenBank:WP_033865253.1;Name=WP_033865253.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122052.1;locus_tag=AD11_RS05835;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_033865253.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 38167 38682 . + . ID=gene-AD11_RS05840;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AD11_RS05840 NZ_JJLL01000094.1 Protein Homology CDS 38167 38682 . + 0 ID=cds-WP_001255229.1;Parent=gene-AD11_RS05840;Dbxref=GenBank:WP_001255229.1;Name=WP_001255229.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415067.1;locus_tag=AD11_RS05840;product=fimbria assembly protein;protein_id=WP_001255229.1;transl_table=11 NZ_JJLL01000094.1 RefSeq gene 38685 39266 . - . ID=gene-AD11_RS05845;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=AD11_RS05845;old_locus_tag=AD11_0595 NZ_JJLL01000094.1 Protein Homology CDS 38685 39266 . - 0 ID=cds-WP_033865246.1;Parent=gene-AD11_RS05845;Dbxref=GenBank:WP_033865246.1;Name=WP_033865246.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AD11_RS05845;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_033865246.1;transl_table=11 NZ_JJLL01000094.1 RefSeq pseudogene 39316 39898 . + . ID=gene-AD11_RS05850;Name=AD11_RS05850;end_range=39898,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS05850;old_locus_tag=AD11_0596;partial=true;pseudo=true NZ_JJLL01000094.1 Protein Homology CDS 39316 39898 . + 0 ID=cds-AD11_RS05850;Parent=gene-AD11_RS05850;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=39898,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS05850;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000095.1 1 8107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000095.1 RefSeq region 1 8107 . + . ID=NZ_JJLL01000095.1:1..8107;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000095.1 RefSeq pseudogene 1 342 . + . ID=gene-AD11_RS05855;Name=AD11_RS05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS05855;old_locus_tag=AD11_0597;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000095.1 Protein Homology CDS 1 342 . + 0 ID=cds-AD11_RS05855;Parent=gene-AD11_RS05855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS05855;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000095.1 RefSeq pseudogene 331 423 . - . ID=gene-AD11_RS31435;Name=AD11_RS31435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31435;partial=true;pseudo=true;start_range=.,331 NZ_JJLL01000095.1 Protein Homology CDS 331 423 . - 0 ID=cds-AD11_RS31435;Parent=gene-AD11_RS31435;Note=activates the production of the major fimbrae protein FimA%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AD11_RS31435;partial=true;product=fimbria biosynthesis transcriptional regulator FimZ;pseudo=true;start_range=.,331;transl_table=11 NZ_JJLL01000095.1 RefSeq gene 666 742 . + . ID=gene-AD11_RS05865;Name=AD11_RS05865;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS05865;old_locus_tag=AD11_0598 NZ_JJLL01000095.1 tRNAscan-SE tRNA 666 742 . + . ID=rna-AD11_RS05865;Parent=gene-AD11_RS05865;anticodon=(pos:700..702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS05865;product=tRNA-Arg NZ_JJLL01000095.1 tRNAscan-SE exon 666 742 . + . ID=exon-AD11_RS05865-1;Parent=rna-AD11_RS05865;anticodon=(pos:700..702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS05865;product=tRNA-Arg NZ_JJLL01000095.1 RefSeq gene 788 1549 . - . ID=gene-AD11_RS05870;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=AD11_RS05870;old_locus_tag=AD11_0599 NZ_JJLL01000095.1 Protein Homology CDS 788 1549 . - 0 ID=cds-WP_001177464.1;Parent=gene-AD11_RS05870;Dbxref=GenBank:WP_001177464.1;Name=WP_001177464.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308625.1;locus_tag=AD11_RS05870;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_001177464.1;transl_table=11 NZ_JJLL01000095.1 RefSeq gene 1732 2622 . - . ID=gene-AD11_RS05875;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=AD11_RS05875;old_locus_tag=AD11_0600 NZ_JJLL01000095.1 Protein Homology CDS 1732 2622 . - 0 ID=cds-WP_001224575.1;Parent=gene-AD11_RS05875;Dbxref=GenBank:WP_001224575.1;Name=WP_001224575.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308626.1;locus_tag=AD11_RS05875;product=DUF4434 family protein;protein_id=WP_001224575.1;transl_table=11 NZ_JJLL01000095.1 RefSeq gene 2623 6705 . - . ID=gene-AD11_RS32205;Name=AD11_RS32205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32205;old_locus_tag=AD11_0601 NZ_JJLL01000095.1 Protein Homology CDS 2623 6705 . - 0 ID=cds-WP_051577914.1;Parent=gene-AD11_RS32205;Dbxref=GenBank:WP_051577914.1;Name=WP_051577914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000662380.1;locus_tag=AD11_RS32205;product=phage receptor;protein_id=WP_051577914.1;transl_table=11 NZ_JJLL01000095.1 RefSeq gene 6976 8107 . - . ID=gene-AD11_RS05890;Name=AD11_RS05890;end_range=8107,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05890;old_locus_tag=AD11_0602;partial=true NZ_JJLL01000095.1 Protein Homology CDS 6976 8107 . - 1 ID=cds-WP_248790694.1;Parent=gene-AD11_RS05890;Dbxref=GenBank:WP_248790694.1;Name=WP_248790694.1;Ontology_term=GO:0004803;end_range=8107,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS05890;partial=true;product=ISAs1 family transposase;protein_id=WP_248790694.1;transl_table=11 ##sequence-region NZ_JJLL01000096.1 1 8321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000096.1 RefSeq region 1 8321 . + . ID=NZ_JJLL01000096.1:1..8321;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000096.1 RefSeq gene 1 767 . - . ID=gene-AD11_RS05895;Name=AD11_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05895;old_locus_tag=AD11_0603;partial=true;start_range=.,1 NZ_JJLL01000096.1 Protein Homology CDS 1 767 . - 0 ID=cds-WP_032271345.1;Parent=gene-AD11_RS05895;Dbxref=GenBank:WP_032271345.1;Name=WP_032271345.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS05895;partial=true;product=ISAs1 family transposase;protein_id=WP_032271345.1;start_range=.,1;transl_table=11 NZ_JJLL01000096.1 RefSeq gene 1732 2019 . - . ID=gene-AD11_RS32465;Name=AD11_RS32465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32465 NZ_JJLL01000096.1 Protein Homology CDS 1732 2019 . - 0 ID=cds-WP_001021473.1;Parent=gene-AD11_RS32465;Dbxref=GenBank:WP_001021473.1;Name=WP_001021473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021472.1;locus_tag=AD11_RS32465;product=hypothetical protein;protein_id=WP_001021473.1;transl_table=11 NZ_JJLL01000096.1 RefSeq gene 2019 2279 . - . ID=gene-AD11_RS05910;Name=AD11_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05910 NZ_JJLL01000096.1 Protein Homology CDS 2019 2279 . - 0 ID=cds-WP_000889443.1;Parent=gene-AD11_RS05910;Dbxref=GenBank:WP_000889443.1;Name=WP_000889443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889444.1;locus_tag=AD11_RS05910;product=hypothetical protein;protein_id=WP_000889443.1;transl_table=11 NZ_JJLL01000096.1 RefSeq gene 2312 6829 . - . ID=gene-AD11_RS05915;Name=AD11_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05915;old_locus_tag=AD11_0605 NZ_JJLL01000096.1 Protein Homology CDS 2312 6829 . - 0 ID=cds-WP_033866297.1;Parent=gene-AD11_RS05915;Dbxref=GenBank:WP_033866297.1;Name=WP_033866297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001470092.1;locus_tag=AD11_RS05915;product=RHS repeat-associated core domain-containing protein;protein_id=WP_033866297.1;transl_table=11 NZ_JJLL01000096.1 RefSeq gene 6849 7310 . - . ID=gene-AD11_RS05920;Name=AD11_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05920;old_locus_tag=AD11_0606 NZ_JJLL01000096.1 Protein Homology CDS 6849 7310 . - 0 ID=cds-WP_001160805.1;Parent=gene-AD11_RS05920;Dbxref=GenBank:WP_001160805.1;Name=WP_001160805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308633.1;locus_tag=AD11_RS05920;product=DcrB-related protein;protein_id=WP_001160805.1;transl_table=11 NZ_JJLL01000096.1 RefSeq gene 7338 8321 . - . ID=gene-AD11_RS05925;Name=tssI;end_range=8321,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AD11_RS05925;old_locus_tag=AD11_0607;partial=true NZ_JJLL01000096.1 Protein Homology CDS 7338 8321 . - 0 ID=cds-WP_033866298.1;Parent=gene-AD11_RS05925;Dbxref=GenBank:WP_033866298.1;Name=WP_033866298.1;Ontology_term=GO:0033103;end_range=8321,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AD11_RS05925;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_033866298.1;transl_table=11 ##sequence-region NZ_JJLL01000097.1 1 87904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000097.1 RefSeq region 1 87904 . + . ID=NZ_JJLL01000097.1:1..87904;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000097.1 RefSeq gene 30 1142 . + . ID=gene-AD11_RS05930;Name=AD11_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS05930;old_locus_tag=AD11_0608 NZ_JJLL01000097.1 Protein Homology CDS 30 1142 . + 0 ID=cds-WP_001300563.1-2;Parent=gene-AD11_RS05930;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS05930;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 1424 2044 . - . ID=gene-AD11_RS05935;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AD11_RS05935;old_locus_tag=AD11_0610 NZ_JJLL01000097.1 Protein Homology CDS 1424 2044 . - 0 ID=cds-WP_001506608.1;Parent=gene-AD11_RS05935;Dbxref=GenBank:WP_001506608.1;Name=WP_001506608.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AD11_RS05935;product=enterobactin synthase subunit EntD;protein_id=WP_001506608.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 2219 4459 . - . ID=gene-AD11_RS05940;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AD11_RS05940;old_locus_tag=AD11_0611 NZ_JJLL01000097.1 Protein Homology CDS 2219 4459 . - 0 ID=cds-WP_001034911.1;Parent=gene-AD11_RS05940;Dbxref=GenBank:WP_001034911.1;Name=WP_001034911.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415116.1;locus_tag=AD11_RS05940;product=siderophore enterobactin receptor FepA;protein_id=WP_001034911.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 4702 5904 . + . ID=gene-AD11_RS05945;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AD11_RS05945;old_locus_tag=AD11_0613 NZ_JJLL01000097.1 Protein Homology CDS 4702 5904 . + 0 ID=cds-WP_000125832.1;Parent=gene-AD11_RS05945;Dbxref=GenBank:WP_000125832.1;Name=WP_000125832.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415117.2;locus_tag=AD11_RS05945;product=enterochelin esterase;protein_id=WP_000125832.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 5907 6125 . + . ID=gene-AD11_RS05950;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AD11_RS05950;old_locus_tag=AD11_0614 NZ_JJLL01000097.1 Protein Homology CDS 5907 6125 . + 0 ID=cds-WP_000885798.1;Parent=gene-AD11_RS05950;Dbxref=GenBank:WP_000885798.1;Name=WP_000885798.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AD11_RS05950;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885798.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 6122 10003 . + . ID=gene-AD11_RS05955;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AD11_RS05955;old_locus_tag=AD11_0615 NZ_JJLL01000097.1 Protein Homology CDS 6122 10003 . + 0 ID=cds-WP_032200887.1;Parent=gene-AD11_RS05955;Dbxref=GenBank:WP_032200887.1;Name=WP_032200887.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AD11_RS05955;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_032200887.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 10219 11352 . + . ID=gene-AD11_RS05960;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=AD11_RS05960;old_locus_tag=AD11_0616 NZ_JJLL01000097.1 Protein Homology CDS 10219 11352 . + 0 ID=cds-WP_032191581.1;Parent=gene-AD11_RS05960;Dbxref=GenBank:WP_032191581.1;Name=WP_032191581.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415119.1;locus_tag=AD11_RS05960;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_032191581.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 11349 12164 . - . ID=gene-AD11_RS05965;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AD11_RS05965;old_locus_tag=AD11_0617 NZ_JJLL01000097.1 Protein Homology CDS 11349 12164 . - 0 ID=cds-WP_000140647.1;Parent=gene-AD11_RS05965;Dbxref=GenBank:WP_000140647.1;Name=WP_000140647.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AD11_RS05965;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140647.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 12161 13153 . - . ID=gene-AD11_RS05970;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AD11_RS05970;old_locus_tag=AD11_0618 NZ_JJLL01000097.1 Protein Homology CDS 12161 13153 . - 0 ID=cds-WP_000640991.1;Parent=gene-AD11_RS05970;Dbxref=GenBank:WP_000640991.1;Name=WP_000640991.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415121.1;locus_tag=AD11_RS05970;product=iron-enterobactin ABC transporter permease;protein_id=WP_000640991.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 13150 14154 . - . ID=gene-AD11_RS05975;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AD11_RS05975;old_locus_tag=AD11_0619 NZ_JJLL01000097.1 Protein Homology CDS 13150 14154 . - 0 ID=cds-WP_000016947.1;Parent=gene-AD11_RS05975;Dbxref=GenBank:WP_000016947.1;Name=WP_000016947.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415122.1;locus_tag=AD11_RS05975;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_000016947.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 14265 15515 . + . ID=gene-AD11_RS05980;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AD11_RS05980;old_locus_tag=AD11_0620 NZ_JJLL01000097.1 Protein Homology CDS 14265 15515 . + 0 ID=cds-WP_001041786.1;Parent=gene-AD11_RS05980;Dbxref=GenBank:WP_001041786.1;Name=WP_001041786.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=AD11_RS05980;product=enterobactin transporter EntS;protein_id=WP_001041786.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 15519 16475 . - . ID=gene-AD11_RS05985;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AD11_RS05985;old_locus_tag=AD11_0621 NZ_JJLL01000097.1 Protein Homology CDS 15519 16475 . - 0 ID=cds-WP_001234311.1;Parent=gene-AD11_RS05985;Dbxref=GenBank:WP_001234311.1;Name=WP_001234311.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AD11_RS05985;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234311.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 16850 18025 . + . ID=gene-AD11_RS05990;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AD11_RS05990;old_locus_tag=AD11_0622 NZ_JJLL01000097.1 Protein Homology CDS 16850 18025 . + 0 ID=cds-WP_000381303.1;Parent=gene-AD11_RS05990;Dbxref=GenBank:WP_000381303.1;Name=WP_000381303.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AD11_RS05990;product=isochorismate synthase EntC;protein_id=WP_000381303.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 18035 19645 . + . ID=gene-AD11_RS05995;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AD11_RS05995;old_locus_tag=AD11_0623 NZ_JJLL01000097.1 Protein Homology CDS 18035 19645 . + 0 ID=cds-WP_000026804.1;Parent=gene-AD11_RS05995;Dbxref=GenBank:WP_000026804.1;Name=WP_000026804.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AD11_RS05995;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_000026804.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 19659 20516 . + . ID=gene-AD11_RS06000;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AD11_RS06000;old_locus_tag=AD11_0624 NZ_JJLL01000097.1 Protein Homology CDS 19659 20516 . + 0 ID=cds-WP_001007155.1;Parent=gene-AD11_RS06000;Dbxref=GenBank:WP_001007155.1;Name=WP_001007155.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AD11_RS06000;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_001007155.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 20516 21262 . + . ID=gene-AD11_RS06005;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AD11_RS06005;old_locus_tag=AD11_0625 NZ_JJLL01000097.1 Protein Homology CDS 20516 21262 . + 0 ID=cds-WP_000347664.1;Parent=gene-AD11_RS06005;Dbxref=GenBank:WP_000347664.1;Name=WP_000347664.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706451.2;locus_tag=AD11_RS06005;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347664.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 21265 21678 . + . ID=gene-AD11_RS06010;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AD11_RS06010;old_locus_tag=AD11_0626 NZ_JJLL01000097.1 Protein Homology CDS 21265 21678 . + 0 ID=cds-WP_000637953.1;Parent=gene-AD11_RS06010;Dbxref=GenBank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AD11_RS06010;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 21859 23964 . + . ID=gene-AD11_RS06015;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AD11_RS06015;old_locus_tag=AD11_0627 NZ_JJLL01000097.1 Protein Homology CDS 21859 23964 . + 0 ID=cds-WP_001043134.1;Parent=gene-AD11_RS06015;Dbxref=GenBank:WP_001043134.1;Name=WP_001043134.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AD11_RS06015;product=pyruvate/proton symporter CstA;protein_id=WP_001043134.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 24146 24343 . + . ID=gene-AD11_RS06020;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AD11_RS06020;old_locus_tag=AD11_0628 NZ_JJLL01000097.1 Protein Homology CDS 24146 24343 . + 0 ID=cds-WP_000460431.1;Parent=gene-AD11_RS06020;Dbxref=GenBank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AD11_RS06020;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 24353 25441 . - . ID=gene-AD11_RS06025;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AD11_RS06025;old_locus_tag=AD11_0629 NZ_JJLL01000097.1 Protein Homology CDS 24353 25441 . - 0 ID=cds-WP_001120432.1;Parent=gene-AD11_RS06025;Dbxref=GenBank:WP_001120432.1;Name=WP_001120432.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308665.1;locus_tag=AD11_RS06025;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120432.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 25550 26710 . + . ID=gene-AD11_RS06030;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AD11_RS06030;old_locus_tag=AD11_0630 NZ_JJLL01000097.1 Protein Homology CDS 25550 26710 . + 0 ID=cds-WP_000183927.1;Parent=gene-AD11_RS06030;Dbxref=GenBank:WP_000183927.1;Name=WP_000183927.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706456.1;locus_tag=AD11_RS06030;product=methionine-oxo-acid transaminase;protein_id=WP_000183927.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 26711 27340 . - . ID=gene-AD11_RS06035;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=AD11_RS06035;old_locus_tag=AD11_0631 NZ_JJLL01000097.1 Protein Homology CDS 26711 27340 . - 0 ID=cds-WP_000502945.1;Parent=gene-AD11_RS06035;Dbxref=GenBank:WP_000502945.1;Name=WP_000502945.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415134.1;locus_tag=AD11_RS06035;product=IbrB-like domain-containing protein;protein_id=WP_000502945.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 27313 28533 . - . ID=gene-AD11_RS06040;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=AD11_RS06040;old_locus_tag=AD11_0632 NZ_JJLL01000097.1 Protein Homology CDS 27313 28533 . - 0 ID=cds-WP_000029825.1;Parent=gene-AD11_RS06040;Dbxref=GenBank:WP_000029825.1;Name=WP_000029825.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415135.1;locus_tag=AD11_RS06040;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000029825.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 28680 29582 . - . ID=gene-AD11_RS06045;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=AD11_RS06045;old_locus_tag=AD11_0633 NZ_JJLL01000097.1 Protein Homology CDS 28680 29582 . - 0 ID=cds-WP_033865271.1;Parent=gene-AD11_RS06045;Dbxref=GenBank:WP_033865271.1;Name=WP_033865271.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=AD11_RS06045;product=DNA-binding transcriptional repressor CitR;protein_id=WP_033865271.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 29791 30537 . - . ID=gene-AD11_RS06050;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AD11_RS06050;old_locus_tag=AD11_0634 NZ_JJLL01000097.1 Protein Homology CDS 29791 30537 . - 0 ID=cds-WP_000913829.1;Parent=gene-AD11_RS06050;Dbxref=GenBank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AD11_RS06050;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 30909 31472 . + . ID=gene-AD11_RS06055;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AD11_RS06055;old_locus_tag=AD11_0635 NZ_JJLL01000097.1 Protein Homology CDS 30909 31472 . + 0 ID=cds-WP_000052796.1;Parent=gene-AD11_RS06055;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AD11_RS06055;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 31717 33282 . + . ID=gene-AD11_RS06060;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AD11_RS06060;old_locus_tag=AD11_0637 NZ_JJLL01000097.1 Protein Homology CDS 31717 33282 . + 0 ID=cds-WP_000887629.1;Parent=gene-AD11_RS06060;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AD11_RS06060;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 33403 33831 . - . ID=gene-AD11_RS06065;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AD11_RS06065;old_locus_tag=AD11_0638 NZ_JJLL01000097.1 Protein Homology CDS 33403 33831 . - 0 ID=cds-WP_000278509.1;Parent=gene-AD11_RS06065;Dbxref=GenBank:WP_000278509.1;Name=WP_000278509.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415140.1;locus_tag=AD11_RS06065;product=universal stress protein UspG;protein_id=WP_000278509.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 34052 35290 . + . ID=gene-AD11_RS06070;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AD11_RS06070;old_locus_tag=AD11_0639 NZ_JJLL01000097.1 Protein Homology CDS 34052 35290 . + 0 ID=cds-WP_033865272.1;Parent=gene-AD11_RS06070;Dbxref=GenBank:WP_033865272.1;Name=WP_033865272.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308674.1;locus_tag=AD11_RS06070;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_033865272.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 35294 35383 . - . ID=gene-AD11_RS32850;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AD11_RS32850;old_locus_tag=AD11_0640 NZ_JJLL01000097.1 Protein Homology CDS 35294 35383 . - 0 ID=cds-WP_000796528.1;Parent=gene-AD11_RS32850;Dbxref=GenBank:WP_000796528.1;Name=WP_000796528.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AD11_RS32850;product=small membrane protein YldA;protein_id=WP_000796528.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 35521 35931 . - . ID=gene-AD11_RS06080;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AD11_RS06080;old_locus_tag=AD11_0641 NZ_JJLL01000097.1 Protein Homology CDS 35521 35931 . - 0 ID=cds-WP_000089731.1;Parent=gene-AD11_RS06080;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AD11_RS06080;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 36160 36966 . - . ID=gene-AD11_RS06085;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AD11_RS06085;old_locus_tag=AD11_0642 NZ_JJLL01000097.1 Protein Homology CDS 36160 36966 . - 0 ID=cds-WP_001295857.1;Parent=gene-AD11_RS06085;Dbxref=GenBank:WP_001295857.1;Name=WP_001295857.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308677.1;locus_tag=AD11_RS06085;product=ribonuclease I;protein_id=WP_001295857.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 37080 38543 . - . ID=gene-AD11_RS06090;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AD11_RS06090;old_locus_tag=AD11_0643 NZ_JJLL01000097.1 Protein Homology CDS 37080 38543 . - 0 ID=cds-WP_000050323.1;Parent=gene-AD11_RS06090;Dbxref=GenBank:WP_000050323.1;Name=WP_000050323.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AD11_RS06090;product=citrate/succinate antiporter CitT;protein_id=WP_000050323.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 38594 39472 . - . ID=gene-AD11_RS06095;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AD11_RS06095;old_locus_tag=AD11_0644 NZ_JJLL01000097.1 Protein Homology CDS 38594 39472 . - 0 ID=cds-WP_000062459.1;Parent=gene-AD11_RS06095;Dbxref=GenBank:WP_000062459.1;Name=WP_000062459.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AD11_RS06095;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000062459.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 39447 39998 . - . ID=gene-AD11_RS06100;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AD11_RS06100;old_locus_tag=AD11_0645 NZ_JJLL01000097.1 Protein Homology CDS 39447 39998 . - 0 ID=cds-WP_000550411.1;Parent=gene-AD11_RS06100;Dbxref=GenBank:WP_000550411.1;Name=WP_000550411.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AD11_RS06100;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550411.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 40002 41534 . - . ID=gene-AD11_RS06105;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AD11_RS06105;old_locus_tag=AD11_0646 NZ_JJLL01000097.1 Protein Homology CDS 40002 41534 . - 0 ID=cds-WP_033865275.1;Parent=gene-AD11_RS06105;Dbxref=GenBank:WP_033865275.1;Name=WP_033865275.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AD11_RS06105;product=citrate lyase subunit alpha;protein_id=WP_033865275.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 41545 42453 . - . ID=gene-AD11_RS06110;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AD11_RS06110;old_locus_tag=AD11_0647 NZ_JJLL01000097.1 Protein Homology CDS 41545 42453 . - 0 ID=cds-WP_000622357.1;Parent=gene-AD11_RS06110;Dbxref=GenBank:WP_000622357.1;Name=WP_000622357.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AD11_RS06110;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622357.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 42450 42746 . - . ID=gene-AD11_RS06115;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AD11_RS06115;old_locus_tag=AD11_0648 NZ_JJLL01000097.1 Protein Homology CDS 42450 42746 . - 0 ID=cds-WP_033865276.1;Parent=gene-AD11_RS06115;Dbxref=GenBank:WP_033865276.1;Name=WP_033865276.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AD11_RS06115;product=citrate lyase acyl carrier protein;protein_id=WP_033865276.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 42761 43819 . - . ID=gene-AD11_RS06120;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AD11_RS06120;old_locus_tag=AD11_0649 NZ_JJLL01000097.1 Protein Homology CDS 42761 43819 . - 0 ID=cds-WP_000467705.1;Parent=gene-AD11_RS06120;Dbxref=GenBank:WP_000467705.1;Name=WP_000467705.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AD11_RS06120;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 44199 45857 . + . ID=gene-AD11_RS06125;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AD11_RS06125;old_locus_tag=AD11_0650 NZ_JJLL01000097.1 Protein Homology CDS 44199 45857 . + 0 ID=cds-WP_000939767.1;Parent=gene-AD11_RS06125;Dbxref=GenBank:WP_000939767.1;Name=WP_000939767.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415152.1;locus_tag=AD11_RS06125;product=sensor histidine kinase DpiB;protein_id=WP_000939767.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 45826 46506 . + . ID=gene-AD11_RS06130;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AD11_RS06130;old_locus_tag=AD11_0651 NZ_JJLL01000097.1 Protein Homology CDS 45826 46506 . + 0 ID=cds-WP_000126500.1;Parent=gene-AD11_RS06130;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AD11_RS06130;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 46547 47932 . - . ID=gene-AD11_RS06135;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AD11_RS06135;old_locus_tag=AD11_0652 NZ_JJLL01000097.1 Protein Homology CDS 46547 47932 . - 0 ID=cds-WP_000955063.1;Parent=gene-AD11_RS06135;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AD11_RS06135;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JJLL01000097.1 RefSeq pseudogene 48520 49081 . + . ID=gene-AD11_RS06140;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=pseudogene;locus_tag=AD11_RS06140;pseudo=true NZ_JJLL01000097.1 Protein Homology CDS 48520 49081 . + 0 ID=cds-AD11_RS06140;Parent=gene-AD11_RS06140;Note=frameshifted;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AD11_RS06140;product=lipid IV(A) palmitoyltransferase PagP;pseudo=true;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 49256 49465 . + . ID=gene-AD11_RS06145;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD11_RS06145;old_locus_tag=AD11_0656 NZ_JJLL01000097.1 Protein Homology CDS 49256 49465 . + 0 ID=cds-WP_000034825.1;Parent=gene-AD11_RS06145;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AD11_RS06145;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 49519 49902 . - . ID=gene-AD11_RS06150;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AD11_RS06150;old_locus_tag=AD11_0657 NZ_JJLL01000097.1 Protein Homology CDS 49519 49902 . - 0 ID=cds-WP_000939749.1;Parent=gene-AD11_RS06150;Dbxref=GenBank:WP_000939749.1;Name=WP_000939749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=AD11_RS06150;product=fluoride efflux transporter CrcB;protein_id=WP_000939749.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 49995 50783 . + . ID=gene-AD11_RS06155;Name=AD11_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06155;old_locus_tag=AD11_0658 NZ_JJLL01000097.1 Protein Homology CDS 49995 50783 . + 0 ID=cds-WP_000959109.1;Parent=gene-AD11_RS06155;Dbxref=GenBank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AD11_RS06155;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 50912 51115 . + . ID=gene-AD11_RS06160;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AD11_RS06160;old_locus_tag=AD11_0659 NZ_JJLL01000097.1 Protein Homology CDS 50912 51115 . + 0 ID=cds-WP_000503931.1;Parent=gene-AD11_RS06160;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AD11_RS06160;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 51216 52181 . - . ID=gene-AD11_RS06165;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AD11_RS06165;old_locus_tag=AD11_0660 NZ_JJLL01000097.1 Protein Homology CDS 51216 52181 . - 0 ID=cds-WP_000042622.1;Parent=gene-AD11_RS06165;Dbxref=GenBank:WP_000042622.1;Name=WP_000042622.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AD11_RS06165;product=lipoyl synthase;protein_id=WP_000042622.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 52390 53343 . - . ID=gene-AD11_RS06170;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AD11_RS06170;old_locus_tag=AD11_0661 NZ_JJLL01000097.1 Protein Homology CDS 52390 53343 . - 0 ID=cds-WP_001619222.1;Parent=gene-AD11_RS06170;Dbxref=GenBank:WP_001619222.1;Name=WP_001619222.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AD11_RS06170;product=YbeF family transcriptional regulator;protein_id=WP_001619222.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 53602 54243 . - . ID=gene-AD11_RS06180;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AD11_RS06180;old_locus_tag=AD11_0662 NZ_JJLL01000097.1 Protein Homology CDS 53602 54243 . - 0 ID=cds-WP_000284027.1;Parent=gene-AD11_RS06180;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AD11_RS06180;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 54344 54607 . - . ID=gene-AD11_RS06185;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AD11_RS06185;old_locus_tag=AD11_0663 NZ_JJLL01000097.1 Protein Homology CDS 54344 54607 . - 0 ID=cds-WP_000850550.1;Parent=gene-AD11_RS06185;Dbxref=GenBank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AD11_RS06185;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 54717 55928 . - . ID=gene-AD11_RS06190;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AD11_RS06190;old_locus_tag=AD11_0664 NZ_JJLL01000097.1 Protein Homology CDS 54717 55928 . - 0 ID=cds-WP_001092082.1;Parent=gene-AD11_RS06190;Dbxref=GenBank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AD11_RS06190;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 56067 57155 . - . ID=gene-AD11_RS06195;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AD11_RS06195;old_locus_tag=AD11_0666 NZ_JJLL01000097.1 Protein Homology CDS 56067 57155 . - 0 ID=cds-WP_001619223.1;Parent=gene-AD11_RS06195;Dbxref=GenBank:WP_001619223.1;Name=WP_001619223.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AD11_RS06195;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001619223.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 57166 58278 . - . ID=gene-AD11_RS06200;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AD11_RS06200;old_locus_tag=AD11_0667 NZ_JJLL01000097.1 Protein Homology CDS 57166 58278 . - 0 ID=cds-WP_000131719.1;Parent=gene-AD11_RS06200;Dbxref=GenBank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AD11_RS06200;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 58281 60182 . - . ID=gene-AD11_RS06205;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AD11_RS06205;old_locus_tag=AD11_0668 NZ_JJLL01000097.1 Protein Homology CDS 58281 60182 . - 0 ID=cds-WP_000776191.1;Parent=gene-AD11_RS06205;Dbxref=GenBank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AD11_RS06205;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 60213 60680 . - . ID=gene-AD11_RS06210;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AD11_RS06210;old_locus_tag=AD11_0669 NZ_JJLL01000097.1 Protein Homology CDS 60213 60680 . - 0 ID=cds-WP_000776104.1;Parent=gene-AD11_RS06210;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AD11_RS06210;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 60684 61001 . - . ID=gene-AD11_RS06215;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AD11_RS06215;old_locus_tag=AD11_0670 NZ_JJLL01000097.1 Protein Homology CDS 60684 61001 . - 0 ID=cds-WP_001161664.1;Parent=gene-AD11_RS06215;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AD11_RS06215;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 61261 61872 . - . ID=gene-AD11_RS06220;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AD11_RS06220;old_locus_tag=AD11_0671 NZ_JJLL01000097.1 Protein Homology CDS 61261 61872 . - 0 ID=cds-WP_001241883.1;Parent=gene-AD11_RS06220;Dbxref=GenBank:WP_001241883.1;Name=WP_001241883.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308703.1;locus_tag=AD11_RS06220;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241883.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 61896 62537 . - . ID=gene-AD11_RS06225;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AD11_RS06225;old_locus_tag=AD11_0672 NZ_JJLL01000097.1 Protein Homology CDS 61896 62537 . - 0 ID=cds-WP_000838889.1;Parent=gene-AD11_RS06225;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AD11_RS06225;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 62539 63570 . - . ID=gene-AD11_RS06230;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AD11_RS06230;old_locus_tag=AD11_0673 NZ_JJLL01000097.1 Protein Homology CDS 62539 63570 . - 0 ID=cds-WP_000620529.1;Parent=gene-AD11_RS06230;Dbxref=GenBank:WP_000620529.1;Name=WP_000620529.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=AD11_RS06230;product=DNA polymerase III subunit delta;protein_id=WP_000620529.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 63570 64151 . - . ID=gene-AD11_RS06235;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AD11_RS06235;old_locus_tag=AD11_0674 NZ_JJLL01000097.1 Protein Homology CDS 63570 64151 . - 0 ID=cds-WP_001269673.1;Parent=gene-AD11_RS06235;Dbxref=GenBank:WP_001269673.1;Name=WP_001269673.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AD11_RS06235;product=LPS assembly lipoprotein LptE;protein_id=WP_001269673.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 64166 66748 . - . ID=gene-AD11_RS06240;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AD11_RS06240;old_locus_tag=AD11_0675 NZ_JJLL01000097.1 Protein Homology CDS 64166 66748 . - 0 ID=cds-WP_001157886.1;Parent=gene-AD11_RS06240;Dbxref=GenBank:WP_001157886.1;Name=WP_001157886.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AD11_RS06240;product=leucine--tRNA ligase;protein_id=WP_001157886.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 66983 67465 . + . ID=gene-AD11_RS06245;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AD11_RS06245;old_locus_tag=AD11_0676 NZ_JJLL01000097.1 Protein Homology CDS 66983 67465 . + 0 ID=cds-WP_001044880.1;Parent=gene-AD11_RS06245;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AD11_RS06245;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 67535 68512 . - . ID=gene-AD11_RS06250;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=AD11_RS06250;old_locus_tag=AD11_0677 NZ_JJLL01000097.1 Protein Homology CDS 67535 68512 . - 0 ID=cds-WP_000578178.1;Parent=gene-AD11_RS06250;Dbxref=GenBank:WP_000578178.1;Name=WP_000578178.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AD11_RS06250;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_000578178.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 68676 69383 . + . ID=gene-AD11_RS06255;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AD11_RS06255;old_locus_tag=AD11_0679 NZ_JJLL01000097.1 Protein Homology CDS 68676 69383 . + 0 ID=cds-WP_000367023.1;Parent=gene-AD11_RS06255;Dbxref=GenBank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AD11_RS06255;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 69380 70807 . + . ID=gene-AD11_RS06260;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=AD11_RS06260;old_locus_tag=AD11_0680 NZ_JJLL01000097.1 Protein Homology CDS 69380 70807 . + 0 ID=cds-WP_000786572.1;Parent=gene-AD11_RS06260;Dbxref=GenBank:WP_000786572.1;Name=WP_000786572.1;gbkey=CDS;gene=djlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AD11_RS06260;product=J domain-containing protein;protein_id=WP_000786572.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 70817 71371 . - . ID=gene-AD11_RS06265;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AD11_RS06265;old_locus_tag=AD11_0681 NZ_JJLL01000097.1 Protein Homology CDS 70817 71371 . - 0 ID=cds-WP_001035673.1;Parent=gene-AD11_RS06265;Dbxref=GenBank:WP_001035673.1;Name=WP_001035673.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AD11_RS06265;product=tetratricopeptide repeat protein;protein_id=WP_001035673.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 71473 72180 . + . ID=gene-AD11_RS06270;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AD11_RS06270;old_locus_tag=AD11_0682 NZ_JJLL01000097.1 Protein Homology CDS 71473 72180 . + 0 ID=cds-WP_001030934.1;Parent=gene-AD11_RS06270;Dbxref=GenBank:WP_001030934.1;Name=WP_001030934.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415181.1;locus_tag=AD11_RS06270;product=DUF1266 domain-containing protein;protein_id=WP_001030934.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 72177 73628 . + . ID=gene-AD11_RS06275;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AD11_RS06275;old_locus_tag=AD11_0683 NZ_JJLL01000097.1 Protein Homology CDS 72177 73628 . + 0 ID=cds-WP_001300403.1;Parent=gene-AD11_RS06275;Dbxref=GenBank:WP_001300403.1;Name=WP_001300403.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415182.1;locus_tag=AD11_RS06275;product=co-chaperone DjlC;protein_id=WP_001300403.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 73688 75358 . - . ID=gene-AD11_RS06280;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=AD11_RS06280;old_locus_tag=AD11_0684 NZ_JJLL01000097.1 Protein Homology CDS 73688 75358 . - 0 ID=cds-WP_033865277.1;Parent=gene-AD11_RS06280;Dbxref=GenBank:WP_033865277.1;Name=WP_033865277.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415183.1;locus_tag=AD11_RS06280;product=molecular chaperone HscC;protein_id=WP_033865277.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 75442 76377 . - . ID=gene-AD11_RS06285;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AD11_RS06285;old_locus_tag=AD11_0685 NZ_JJLL01000097.1 Protein Homology CDS 75442 76377 . - 0 ID=cds-WP_001207520.1;Parent=gene-AD11_RS06285;Dbxref=GenBank:WP_001207520.1;Name=WP_001207520.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415184.1;locus_tag=AD11_RS06285;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_001207520.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 76495 77220 . - . ID=gene-AD11_RS06290;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AD11_RS06290;old_locus_tag=AD11_0686 NZ_JJLL01000097.1 Protein Homology CDS 76495 77220 . - 0 ID=cds-WP_000631384.1;Parent=gene-AD11_RS06290;Dbxref=GenBank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AD11_RS06290;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 77220 77894 . - . ID=gene-AD11_RS06295;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AD11_RS06295;old_locus_tag=AD11_0687 NZ_JJLL01000097.1 Protein Homology CDS 77220 77894 . - 0 ID=cds-WP_000272824.1;Parent=gene-AD11_RS06295;Dbxref=GenBank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AD11_RS06295;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 77894 78634 . - . ID=gene-AD11_RS06300;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AD11_RS06300;old_locus_tag=AD11_0688 NZ_JJLL01000097.1 Protein Homology CDS 77894 78634 . - 0 ID=cds-WP_000020941.1;Parent=gene-AD11_RS06300;Dbxref=GenBank:WP_000020941.1;Name=WP_000020941.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AD11_RS06300;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020941.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 78804 79712 . - . ID=gene-AD11_RS06305;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AD11_RS06305;old_locus_tag=AD11_0689 NZ_JJLL01000097.1 Protein Homology CDS 78804 79712 . - 0 ID=cds-WP_001177086.1;Parent=gene-AD11_RS06305;Dbxref=GenBank:WP_001177086.1;Name=WP_001177086.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415188.1;locus_tag=AD11_RS06305;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001177086.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 80109 81647 . - . ID=gene-AD11_RS06310;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AD11_RS06310;old_locus_tag=AD11_0691 NZ_JJLL01000097.1 Protein Homology CDS 80109 81647 . - 0 ID=cds-WP_033865278.1;Parent=gene-AD11_RS06310;Dbxref=GenBank:WP_033865278.1;Name=WP_033865278.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AD11_RS06310;product=apolipoprotein N-acyltransferase;protein_id=WP_033865278.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 81672 82550 . - . ID=gene-AD11_RS06315;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AD11_RS06315;old_locus_tag=AD11_0692 NZ_JJLL01000097.1 Protein Homology CDS 81672 82550 . - 0 ID=cds-WP_001278605.1;Parent=gene-AD11_RS06315;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AD11_RS06315;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 82640 83107 . - . ID=gene-AD11_RS06320;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AD11_RS06320;old_locus_tag=AD11_0693 NZ_JJLL01000097.1 Protein Homology CDS 82640 83107 . - 0 ID=cds-WP_000084469.1;Parent=gene-AD11_RS06320;Dbxref=GenBank:WP_000084469.1;Name=WP_000084469.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AD11_RS06320;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 83104 84144 . - . ID=gene-AD11_RS06325;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AD11_RS06325;old_locus_tag=AD11_0694 NZ_JJLL01000097.1 Protein Homology CDS 83104 84144 . - 0 ID=cds-WP_001018040.1;Parent=gene-AD11_RS06325;Dbxref=GenBank:WP_001018040.1;Name=WP_001018040.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AD11_RS06325;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 84297 85721 . - . ID=gene-AD11_RS06330;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AD11_RS06330;old_locus_tag=AD11_0695 NZ_JJLL01000097.1 Protein Homology CDS 84297 85721 . - 0 ID=cds-WP_000162740.1;Parent=gene-AD11_RS06330;Dbxref=GenBank:WP_000162740.1;Name=WP_000162740.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AD11_RS06330;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 85867 87042 . + . ID=gene-AD11_RS06335;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AD11_RS06335;old_locus_tag=AD11_0696 NZ_JJLL01000097.1 Protein Homology CDS 85867 87042 . + 0 ID=cds-WP_000184541.1-2;Parent=gene-AD11_RS06335;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AD11_RS06335;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JJLL01000097.1 RefSeq gene 87196 87270 . - . ID=gene-AD11_RS06340;Name=AD11_RS06340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06340;old_locus_tag=AD11_0697 NZ_JJLL01000097.1 tRNAscan-SE tRNA 87196 87270 . - . ID=rna-AD11_RS06340;Parent=gene-AD11_RS06340;anticodon=(pos:complement(87236..87238));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06340;product=tRNA-Gln NZ_JJLL01000097.1 tRNAscan-SE exon 87196 87270 . - . ID=exon-AD11_RS06340-1;Parent=rna-AD11_RS06340;anticodon=(pos:complement(87236..87238));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06340;product=tRNA-Gln NZ_JJLL01000097.1 RefSeq gene 87308 87382 . - . ID=gene-AD11_RS06345;Name=AD11_RS06345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06345;old_locus_tag=AD11_0698 NZ_JJLL01000097.1 tRNAscan-SE tRNA 87308 87382 . - . ID=rna-AD11_RS06345;Parent=gene-AD11_RS06345;anticodon=(pos:complement(87348..87350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06345;product=tRNA-Gln NZ_JJLL01000097.1 tRNAscan-SE exon 87308 87382 . - . ID=exon-AD11_RS06345-1;Parent=rna-AD11_RS06345;anticodon=(pos:complement(87348..87350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06345;product=tRNA-Gln NZ_JJLL01000097.1 RefSeq gene 87420 87494 . - . ID=gene-AD11_RS06350;Name=AD11_RS06350;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06350;old_locus_tag=AD11_0699 NZ_JJLL01000097.1 tRNAscan-SE tRNA 87420 87494 . - . ID=rna-AD11_RS06350;Parent=gene-AD11_RS06350;anticodon=(pos:complement(87460..87462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06350;product=tRNA-Gln NZ_JJLL01000097.1 tRNAscan-SE exon 87420 87494 . - . ID=exon-AD11_RS06350-1;Parent=rna-AD11_RS06350;anticodon=(pos:complement(87460..87462));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06350;product=tRNA-Gln NZ_JJLL01000097.1 RefSeq gene 87532 87606 . - . ID=gene-AD11_RS06355;Name=AD11_RS06355;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06355;old_locus_tag=AD11_0700 NZ_JJLL01000097.1 tRNAscan-SE tRNA 87532 87606 . - . ID=rna-AD11_RS06355;Parent=gene-AD11_RS06355;anticodon=(pos:complement(87572..87574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06355;product=tRNA-Gln NZ_JJLL01000097.1 tRNAscan-SE exon 87532 87606 . - . ID=exon-AD11_RS06355-1;Parent=rna-AD11_RS06355;anticodon=(pos:complement(87572..87574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06355;product=tRNA-Gln NZ_JJLL01000097.1 RefSeq gene 87644 87718 . - . ID=gene-AD11_RS06360;Name=AD11_RS06360;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06360;old_locus_tag=AD11_0701 NZ_JJLL01000097.1 tRNAscan-SE tRNA 87644 87718 . - . ID=rna-AD11_RS06360;Parent=gene-AD11_RS06360;anticodon=(pos:complement(87684..87686));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06360;product=tRNA-Gln NZ_JJLL01000097.1 tRNAscan-SE exon 87644 87718 . - . ID=exon-AD11_RS06360-1;Parent=rna-AD11_RS06360;anticodon=(pos:complement(87684..87686));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06360;product=tRNA-Gln NZ_JJLL01000097.1 RefSeq gene 87766 87842 . - . ID=gene-AD11_RS06365;Name=AD11_RS06365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06365;old_locus_tag=AD11_0702 NZ_JJLL01000097.1 tRNAscan-SE tRNA 87766 87842 . - . ID=rna-AD11_RS06365;Parent=gene-AD11_RS06365;anticodon=(pos:complement(87806..87808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06365;product=tRNA-Met NZ_JJLL01000097.1 tRNAscan-SE exon 87766 87842 . - . ID=exon-AD11_RS06365-1;Parent=rna-AD11_RS06365;anticodon=(pos:complement(87806..87808));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06365;product=tRNA-Met ##sequence-region NZ_JJLL01000098.1 1 1329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000098.1 RefSeq region 1 1329 . + . ID=NZ_JJLL01000098.1:1..1329;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000098.1 RefSeq gene 1 75 . - . ID=gene-AD11_RS06370;Name=AD11_RS06370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06370;old_locus_tag=AD11_0703 NZ_JJLL01000098.1 tRNAscan-SE tRNA 1 75 . - . ID=rna-AD11_RS06370;Parent=gene-AD11_RS06370;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06370;product=tRNA-Gln NZ_JJLL01000098.1 tRNAscan-SE exon 1 75 . - . ID=exon-AD11_RS06370-1;Parent=rna-AD11_RS06370;anticodon=(pos:complement(41..43));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06370;product=tRNA-Gln NZ_JJLL01000098.1 RefSeq gene 113 187 . - . ID=gene-AD11_RS06375;Name=AD11_RS06375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06375;old_locus_tag=AD11_0704 NZ_JJLL01000098.1 tRNAscan-SE tRNA 113 187 . - . ID=rna-AD11_RS06375;Parent=gene-AD11_RS06375;anticodon=(pos:complement(153..155));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06375;product=tRNA-Gln NZ_JJLL01000098.1 tRNAscan-SE exon 113 187 . - . ID=exon-AD11_RS06375-1;Parent=rna-AD11_RS06375;anticodon=(pos:complement(153..155));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06375;product=tRNA-Gln NZ_JJLL01000098.1 RefSeq gene 235 311 . - . ID=gene-AD11_RS06380;Name=AD11_RS06380;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06380;old_locus_tag=AD11_0705 NZ_JJLL01000098.1 tRNAscan-SE tRNA 235 311 . - . ID=rna-AD11_RS06380;Parent=gene-AD11_RS06380;anticodon=(pos:complement(275..277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06380;product=tRNA-Met NZ_JJLL01000098.1 tRNAscan-SE exon 235 311 . - . ID=exon-AD11_RS06380-1;Parent=rna-AD11_RS06380;anticodon=(pos:complement(275..277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06380;product=tRNA-Met NZ_JJLL01000098.1 RefSeq gene 327 401 . - . ID=gene-AD11_RS06385;Name=AD11_RS06385;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06385;old_locus_tag=AD11_0706 NZ_JJLL01000098.1 tRNAscan-SE tRNA 327 401 . - . ID=rna-AD11_RS06385;Parent=gene-AD11_RS06385;anticodon=(pos:complement(367..369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06385;product=tRNA-Gln NZ_JJLL01000098.1 tRNAscan-SE exon 327 401 . - . ID=exon-AD11_RS06385-1;Parent=rna-AD11_RS06385;anticodon=(pos:complement(367..369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06385;product=tRNA-Gln NZ_JJLL01000098.1 RefSeq gene 436 510 . - . ID=gene-AD11_RS06390;Name=AD11_RS06390;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06390;old_locus_tag=AD11_0707 NZ_JJLL01000098.1 tRNAscan-SE tRNA 436 510 . - . ID=rna-AD11_RS06390;Parent=gene-AD11_RS06390;anticodon=(pos:complement(476..478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06390;product=tRNA-Gln NZ_JJLL01000098.1 tRNAscan-SE exon 436 510 . - . ID=exon-AD11_RS06390-1;Parent=rna-AD11_RS06390;anticodon=(pos:complement(476..478));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06390;product=tRNA-Gln NZ_JJLL01000098.1 RefSeq gene 545 619 . - . ID=gene-AD11_RS06395;Name=AD11_RS06395;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06395;old_locus_tag=AD11_0708 NZ_JJLL01000098.1 tRNAscan-SE tRNA 545 619 . - . ID=rna-AD11_RS06395;Parent=gene-AD11_RS06395;anticodon=(pos:complement(585..587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06395;product=tRNA-Gln NZ_JJLL01000098.1 tRNAscan-SE exon 545 619 . - . ID=exon-AD11_RS06395-1;Parent=rna-AD11_RS06395;anticodon=(pos:complement(585..587));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06395;product=tRNA-Gln NZ_JJLL01000098.1 RefSeq gene 654 728 . - . ID=gene-AD11_RS06400;Name=AD11_RS06400;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06400;old_locus_tag=AD11_0709 NZ_JJLL01000098.1 tRNAscan-SE tRNA 654 728 . - . ID=rna-AD11_RS06400;Parent=gene-AD11_RS06400;anticodon=(pos:complement(694..696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06400;product=tRNA-Gln NZ_JJLL01000098.1 tRNAscan-SE exon 654 728 . - . ID=exon-AD11_RS06400-1;Parent=rna-AD11_RS06400;anticodon=(pos:complement(694..696));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06400;product=tRNA-Gln NZ_JJLL01000098.1 RefSeq gene 752 836 . - . ID=gene-AD11_RS06405;Name=AD11_RS06405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06405;old_locus_tag=AD11_0710 NZ_JJLL01000098.1 tRNAscan-SE tRNA 752 836 . - . ID=rna-AD11_RS06405;Parent=gene-AD11_RS06405;anticodon=(pos:complement(800..802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06405;product=tRNA-Leu NZ_JJLL01000098.1 tRNAscan-SE exon 752 836 . - . ID=exon-AD11_RS06405-1;Parent=rna-AD11_RS06405;anticodon=(pos:complement(800..802));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06405;product=tRNA-Leu NZ_JJLL01000098.1 RefSeq gene 845 921 . - . ID=gene-AD11_RS06410;Name=AD11_RS06410;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06410;old_locus_tag=AD11_0711 NZ_JJLL01000098.1 tRNAscan-SE tRNA 845 921 . - . ID=rna-AD11_RS06410;Parent=gene-AD11_RS06410;anticodon=(pos:complement(885..887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06410;product=tRNA-Met NZ_JJLL01000098.1 tRNAscan-SE exon 845 921 . - . ID=exon-AD11_RS06410-1;Parent=rna-AD11_RS06410;anticodon=(pos:complement(885..887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06410;product=tRNA-Met ##sequence-region NZ_JJLL01000099.1 1 1145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000099.1 RefSeq region 1 1145 . + . ID=NZ_JJLL01000099.1:1..1145;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000099.1 RefSeq gene 95 171 . - . ID=gene-AD11_RS06415;Name=AD11_RS06415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06415;old_locus_tag=AD11_0712 NZ_JJLL01000099.1 tRNAscan-SE tRNA 95 171 . - . ID=rna-AD11_RS06415;Parent=gene-AD11_RS06415;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06415;product=tRNA-Met NZ_JJLL01000099.1 tRNAscan-SE exon 95 171 . - . ID=exon-AD11_RS06415-1;Parent=rna-AD11_RS06415;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06415;product=tRNA-Met NZ_JJLL01000099.1 RefSeq gene 187 261 . - . ID=gene-AD11_RS06420;Name=AD11_RS06420;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06420;old_locus_tag=AD11_0713 NZ_JJLL01000099.1 tRNAscan-SE tRNA 187 261 . - . ID=rna-AD11_RS06420;Parent=gene-AD11_RS06420;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06420;product=tRNA-Gln NZ_JJLL01000099.1 tRNAscan-SE exon 187 261 . - . ID=exon-AD11_RS06420-1;Parent=rna-AD11_RS06420;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06420;product=tRNA-Gln NZ_JJLL01000099.1 RefSeq gene 285 369 . - . ID=gene-AD11_RS06425;Name=AD11_RS06425;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06425;old_locus_tag=AD11_0714 NZ_JJLL01000099.1 tRNAscan-SE tRNA 285 369 . - . ID=rna-AD11_RS06425;Parent=gene-AD11_RS06425;anticodon=(pos:complement(333..335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06425;product=tRNA-Leu NZ_JJLL01000099.1 tRNAscan-SE exon 285 369 . - . ID=exon-AD11_RS06425-1;Parent=rna-AD11_RS06425;anticodon=(pos:complement(333..335));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06425;product=tRNA-Leu NZ_JJLL01000099.1 RefSeq gene 378 454 . - . ID=gene-AD11_RS06430;Name=AD11_RS06430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06430;old_locus_tag=AD11_0715 NZ_JJLL01000099.1 tRNAscan-SE tRNA 378 454 . - . ID=rna-AD11_RS06430;Parent=gene-AD11_RS06430;anticodon=(pos:complement(418..420));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06430;product=tRNA-Met NZ_JJLL01000099.1 tRNAscan-SE exon 378 454 . - . ID=exon-AD11_RS06430-1;Parent=rna-AD11_RS06430;anticodon=(pos:complement(418..420));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06430;product=tRNA-Met NZ_JJLL01000099.1 RefSeq gene 470 544 . - . ID=gene-AD11_RS06435;Name=AD11_RS06435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06435;old_locus_tag=AD11_0716 NZ_JJLL01000099.1 tRNAscan-SE tRNA 470 544 . - . ID=rna-AD11_RS06435;Parent=gene-AD11_RS06435;anticodon=(pos:complement(510..512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06435;product=tRNA-Gln NZ_JJLL01000099.1 tRNAscan-SE exon 470 544 . - . ID=exon-AD11_RS06435-1;Parent=rna-AD11_RS06435;anticodon=(pos:complement(510..512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06435;product=tRNA-Gln NZ_JJLL01000099.1 RefSeq gene 568 652 . - . ID=gene-AD11_RS06440;Name=AD11_RS06440;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06440;old_locus_tag=AD11_0717 NZ_JJLL01000099.1 tRNAscan-SE tRNA 568 652 . - . ID=rna-AD11_RS06440;Parent=gene-AD11_RS06440;anticodon=(pos:complement(616..618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06440;product=tRNA-Leu NZ_JJLL01000099.1 tRNAscan-SE exon 568 652 . - . ID=exon-AD11_RS06440-1;Parent=rna-AD11_RS06440;anticodon=(pos:complement(616..618));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06440;product=tRNA-Leu NZ_JJLL01000099.1 RefSeq gene 661 737 . - . ID=gene-AD11_RS06445;Name=AD11_RS06445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06445;old_locus_tag=AD11_0718 NZ_JJLL01000099.1 tRNAscan-SE tRNA 661 737 . - . ID=rna-AD11_RS06445;Parent=gene-AD11_RS06445;anticodon=(pos:complement(701..703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06445;product=tRNA-Met NZ_JJLL01000099.1 tRNAscan-SE exon 661 737 . - . ID=exon-AD11_RS06445-1;Parent=rna-AD11_RS06445;anticodon=(pos:complement(701..703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06445;product=tRNA-Met ##sequence-region NZ_JJLL01000100.1 1 32818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000100.1 RefSeq region 1 32818 . + . ID=NZ_JJLL01000100.1:1..32818;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000100.1 RefSeq gene 428 2092 . - . ID=gene-AD11_RS06450;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AD11_RS06450;old_locus_tag=AD11_0719 NZ_JJLL01000100.1 Protein Homology CDS 428 2092 . - 0 ID=cds-WP_000337077.1;Parent=gene-AD11_RS06450;Dbxref=GenBank:WP_000337077.1;Name=WP_000337077.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AD11_RS06450;product=asparagine synthase B;protein_id=WP_000337077.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 2489 3241 . - . ID=gene-AD11_RS06455;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AD11_RS06455;old_locus_tag=AD11_0721 NZ_JJLL01000100.1 Protein Homology CDS 2489 3241 . - 0 ID=cds-WP_000153129.1;Parent=gene-AD11_RS06455;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AD11_RS06455;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 3289 4509 . - . ID=gene-AD11_RS06460;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AD11_RS06460;old_locus_tag=AD11_0722 NZ_JJLL01000100.1 Protein Homology CDS 3289 4509 . - 0 ID=cds-WP_000187594.1;Parent=gene-AD11_RS06460;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AD11_RS06460;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 4518 5666 . - . ID=gene-AD11_RS06465;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD11_RS06465;old_locus_tag=AD11_0723 NZ_JJLL01000100.1 Protein Homology CDS 4518 5666 . - 0 ID=cds-WP_001619225.1;Parent=gene-AD11_RS06465;Dbxref=GenBank:WP_001619225.1;Name=WP_001619225.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AD11_RS06465;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001619225.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 5726 6526 . - . ID=gene-AD11_RS06470;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AD11_RS06470;old_locus_tag=AD11_0724 NZ_JJLL01000100.1 Protein Homology CDS 5726 6526 . - 0 ID=cds-WP_001237072.1;Parent=gene-AD11_RS06470;Dbxref=GenBank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AD11_RS06470;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 6859 8805 . + . ID=gene-AD11_RS06475;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AD11_RS06475;old_locus_tag=AD11_0726 NZ_JJLL01000100.1 Protein Homology CDS 6859 8805 . + 0 ID=cds-WP_001023104.1;Parent=gene-AD11_RS06475;Dbxref=GenBank:WP_001023104.1;Name=WP_001023104.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=AD11_RS06475;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023104.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 9073 10737 . + . ID=gene-AD11_RS06480;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AD11_RS06480;old_locus_tag=AD11_0728 NZ_JJLL01000100.1 Protein Homology CDS 9073 10737 . + 0 ID=cds-WP_001287154.1;Parent=gene-AD11_RS06480;Dbxref=GenBank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AD11_RS06480;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 10899 11057 . - . ID=gene-AD11_RS32025;Name=AD11_RS32025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32025;old_locus_tag=AD11_0729 NZ_JJLL01000100.1 GeneMarkS-2+ CDS 10899 11057 . - 0 ID=cds-WP_152914850.1;Parent=gene-AD11_RS32025;Dbxref=GenBank:WP_152914850.1;Name=WP_152914850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32025;product=hypothetical protein;protein_id=WP_152914850.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 11317 12723 . + . ID=gene-AD11_RS06485;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AD11_RS06485;old_locus_tag=AD11_0730 NZ_JJLL01000100.1 Protein Homology CDS 11317 12723 . + 0 ID=cds-WP_001258839.1;Parent=gene-AD11_RS06485;Dbxref=GenBank:WP_001258839.1;Name=WP_001258839.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AD11_RS06485;product=chitoporin ChiP;protein_id=WP_001258839.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 12773 13099 . + . ID=gene-AD11_RS06490;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AD11_RS06490;old_locus_tag=AD11_0731 NZ_JJLL01000100.1 Protein Homology CDS 12773 13099 . + 0 ID=cds-WP_000733592.1;Parent=gene-AD11_RS06490;Dbxref=GenBank:WP_000733592.1;Name=WP_000733592.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308740.1;locus_tag=AD11_RS06490;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733592.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 13183 13629 . - . ID=gene-AD11_RS06495;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AD11_RS06495;old_locus_tag=AD11_0732 NZ_JJLL01000100.1 Protein Homology CDS 13183 13629 . - 0 ID=cds-WP_000131702.1;Parent=gene-AD11_RS06495;Dbxref=GenBank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AD11_RS06495;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 13622 13708 . - . ID=gene-AD11_RS06500;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AD11_RS06500 NZ_JJLL01000100.1 Protein Homology CDS 13622 13708 . - 0 ID=cds-WP_001406816.1;Parent=gene-AD11_RS06500;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AD11_RS06500;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 13918 14448 . - . ID=gene-AD11_RS06510;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AD11_RS06510;old_locus_tag=AD11_0733 NZ_JJLL01000100.1 Protein Homology CDS 13918 14448 . - 0 ID=cds-WP_001018618.1;Parent=gene-AD11_RS06510;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AD11_RS06510;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 14588 14881 . - . ID=gene-AD11_RS06515;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AD11_RS06515;old_locus_tag=AD11_0734 NZ_JJLL01000100.1 Protein Homology CDS 14588 14881 . - 0 ID=cds-WP_001300829.1;Parent=gene-AD11_RS06515;Dbxref=GenBank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AD11_RS06515;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 15021 15785 . - . ID=gene-AD11_RS06520;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AD11_RS06520;old_locus_tag=AD11_0735 NZ_JJLL01000100.1 Protein Homology CDS 15021 15785 . - 0 ID=cds-WP_033865285.1;Parent=gene-AD11_RS06520;Dbxref=GenBank:WP_033865285.1;Name=WP_033865285.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706538.1;locus_tag=AD11_RS06520;product=esterase;protein_id=WP_033865285.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 15970 16515 . + . ID=gene-AD11_RS06525;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AD11_RS06525;old_locus_tag=AD11_0736 NZ_JJLL01000100.1 Protein Homology CDS 15970 16515 . + 0 ID=cds-WP_000848387.1;Parent=gene-AD11_RS06525;Dbxref=GenBank:WP_000848387.1;Name=WP_000848387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AD11_RS06525;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 16541 18181 . + . ID=gene-AD11_RS06530;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AD11_RS06530;old_locus_tag=AD11_0737 NZ_JJLL01000100.1 Protein Homology CDS 16541 18181 . + 0 ID=cds-WP_001297249.1;Parent=gene-AD11_RS06530;Dbxref=GenBank:WP_001297249.1;Name=WP_001297249.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=AD11_RS06530;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_001297249.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 18396 18890 . + . ID=gene-AD11_RS06535;Name=AD11_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06535;old_locus_tag=AD11_0738 NZ_JJLL01000100.1 Protein Homology CDS 18396 18890 . + 0 ID=cds-WP_000856355.1;Parent=gene-AD11_RS06535;Dbxref=GenBank:WP_000856355.1;Name=WP_000856355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415215.1;locus_tag=AD11_RS06535;product=hypothetical protein;protein_id=WP_000856355.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 18931 19581 . - . ID=gene-AD11_RS06540;Name=AD11_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06540;old_locus_tag=AD11_0739 NZ_JJLL01000100.1 Protein Homology CDS 18931 19581 . - 0 ID=cds-WP_001208814.1;Parent=gene-AD11_RS06540;Dbxref=GenBank:WP_001208814.1;Name=WP_001208814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208812.1;locus_tag=AD11_RS06540;product=DUF2625 domain-containing protein;protein_id=WP_001208814.1;transl_table=11 NZ_JJLL01000100.1 RefSeq pseudogene 19705 19839 . - . ID=gene-AD11_RS06545;Name=AD11_RS06545;end_range=19839,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS06545;partial=true;pseudo=true NZ_JJLL01000100.1 Protein Homology CDS 19705 19839 . - 0 ID=cds-AD11_RS06545;Parent=gene-AD11_RS06545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=19839,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AD11_RS06545;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 19930 21249 . - . ID=gene-AD11_RS06550;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AD11_RS06550;old_locus_tag=AD11_0740 NZ_JJLL01000100.1 Protein Homology CDS 19930 21249 . - 0 ID=cds-WP_000075845.1;Parent=gene-AD11_RS06550;Dbxref=GenBank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AD11_RS06550;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 21246 23444 . - . ID=gene-AD11_RS06555;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AD11_RS06555;old_locus_tag=AD11_0741 NZ_JJLL01000100.1 Protein Homology CDS 21246 23444 . - 0 ID=cds-WP_000040192.1;Parent=gene-AD11_RS06555;Dbxref=GenBank:WP_000040192.1;Name=WP_000040192.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415220.1;locus_tag=AD11_RS06555;product=ornithine decarboxylase SpeF;protein_id=WP_000040192.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 23702 23806 . - . ID=gene-AD11_RS32470;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AD11_RS32470 NZ_JJLL01000100.1 Protein Homology CDS 23702 23806 . - 0 ID=cds-WP_211180488.1;Parent=gene-AD11_RS32470;Dbxref=GenBank:WP_211180488.1;Name=WP_211180488.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AD11_RS32470;product=leader peptide SpeFL;protein_id=WP_211180488.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 24040 24717 . - . ID=gene-AD11_RS06565;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AD11_RS06565;old_locus_tag=AD11_0743 NZ_JJLL01000100.1 Protein Homology CDS 24040 24717 . - 0 ID=cds-WP_000186076.1;Parent=gene-AD11_RS06565;Dbxref=GenBank:WP_000186076.1;Name=WP_000186076.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AD11_RS06565;product=two-component system response regulator KdpE;protein_id=WP_000186076.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 24714 27398 . - . ID=gene-AD11_RS06570;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AD11_RS06570;old_locus_tag=AD11_0744 NZ_JJLL01000100.1 Protein Homology CDS 24714 27398 . - 0 ID=cds-WP_033866303.1;Parent=gene-AD11_RS06570;Dbxref=GenBank:WP_033866303.1;Name=WP_033866303.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415223.1;locus_tag=AD11_RS06570;product=two-component system sensor histidine kinase KdpD;protein_id=WP_033866303.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 27391 27963 . - . ID=gene-AD11_RS06575;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AD11_RS06575;old_locus_tag=AD11_0745 NZ_JJLL01000100.1 Protein Homology CDS 27391 27963 . - 0 ID=cds-WP_001300431.1;Parent=gene-AD11_RS06575;Dbxref=GenBank:WP_001300431.1;Name=WP_001300431.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AD11_RS06575;product=K(+)-transporting ATPase subunit C;protein_id=WP_001300431.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 27972 30020 . - . ID=gene-AD11_RS06580;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AD11_RS06580;old_locus_tag=AD11_0746 NZ_JJLL01000100.1 Protein Homology CDS 27972 30020 . - 0 ID=cds-WP_000087939.1;Parent=gene-AD11_RS06580;Dbxref=GenBank:WP_000087939.1;Name=WP_000087939.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AD11_RS06580;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087939.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 30043 31716 . - . ID=gene-AD11_RS06585;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AD11_RS06585;old_locus_tag=AD11_0747 NZ_JJLL01000100.1 Protein Homology CDS 30043 31716 . - 0 ID=cds-WP_000741131.1;Parent=gene-AD11_RS06585;Dbxref=GenBank:WP_000741131.1;Name=WP_000741131.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AD11_RS06585;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741131.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 31716 31805 . - . ID=gene-AD11_RS06590;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AD11_RS06590 NZ_JJLL01000100.1 Protein Homology CDS 31716 31805 . - 0 ID=cds-WP_001272653.1;Parent=gene-AD11_RS06590;Dbxref=GenBank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AD11_RS06590;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 32118 32324 . + . ID=gene-AD11_RS06595;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AD11_RS06595;old_locus_tag=AD11_0749 NZ_JJLL01000100.1 Protein Homology CDS 32118 32324 . + 0 ID=cds-WP_000424924.1;Parent=gene-AD11_RS06595;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AD11_RS06595;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 NZ_JJLL01000100.1 RefSeq gene 32567 32818 . + . ID=gene-AD11_RS06600;Name=AD11_RS06600;end_range=32818,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06600;old_locus_tag=AD11_0750;partial=true NZ_JJLL01000100.1 Protein Homology CDS 32567 32818 . + 0 ID=cds-WP_027661981.1;Parent=gene-AD11_RS06600;Dbxref=GenBank:WP_027661981.1;Name=WP_027661981.1;end_range=32818,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD11_RS06600;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_027661981.1;transl_table=11 ##sequence-region NZ_JJLL01000101.1 1 2353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000101.1 RefSeq region 1 2353 . + . ID=NZ_JJLL01000101.1:1..2353;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000101.1 RefSeq pseudogene 1 2353 . + . ID=gene-AD11_RS06605;Name=rhsB;end_range=2353,.;gbkey=Gene;gene=rhsB;gene_biotype=pseudogene;locus_tag=AD11_RS06605;old_locus_tag=AD11_0751;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000101.1 Protein Homology CDS 1 2353 . + 1 ID=cds-AD11_RS06605;Parent=gene-AD11_RS06605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2353,.;gbkey=CDS;gene=rhsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD11_RS06605;partial=true;product=rhs element protein RhsB;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000102.1 1 1501 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000102.1 RefSeq region 1 1501 . + . ID=NZ_JJLL01000102.1:1..1501;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000102.1 RefSeq gene 1 754 . + . ID=gene-AD11_RS06610;Name=AD11_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06610;old_locus_tag=AD11_0752;partial=true;start_range=.,1 NZ_JJLL01000102.1 Protein Homology CDS 1 754 . + 1 ID=cds-WP_001073190.1;Parent=gene-AD11_RS06610;Dbxref=GenBank:WP_001073190.1;Name=WP_001073190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AD11_RS06610;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_001073190.1;start_range=.,1;transl_table=11 NZ_JJLL01000102.1 RefSeq gene 754 1080 . + . ID=gene-AD11_RS06615;Name=ybfB;gbkey=Gene;gene=ybfB;gene_biotype=protein_coding;locus_tag=AD11_RS06615 NZ_JJLL01000102.1 Protein Homology CDS 754 1080 . + 0 ID=cds-WP_000873944.1;Parent=gene-AD11_RS06615;Dbxref=GenBank:WP_000873944.1;Name=WP_000873944.1;gbkey=CDS;gene=ybfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415230.1;locus_tag=AD11_RS06615;product=protein YbfB;protein_id=WP_000873944.1;transl_table=11 NZ_JJLL01000102.1 RefSeq pseudogene 1111 1501 . + . ID=gene-AD11_RS06620;Name=AD11_RS06620;end_range=1501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS06620;old_locus_tag=AD11_0753;partial=true;pseudo=true;start_range=.,1111 NZ_JJLL01000102.1 Protein Homology CDS 1111 1501 . + 0 ID=cds-AD11_RS06620;Parent=gene-AD11_RS06620;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD11_RS06620;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1111;transl_table=11 ##sequence-region NZ_JJLL01000103.1 1 2629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000103.1 RefSeq region 1 2629 . + . ID=NZ_JJLL01000103.1:1..2629;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000103.1 RefSeq gene 1 905 . + . ID=gene-AD11_RS06625;Name=AD11_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06625;old_locus_tag=AD11_0754;partial=true;start_range=.,1 NZ_JJLL01000103.1 Protein Homology CDS 1 905 . + 2 ID=cds-WP_033866309.1;Parent=gene-AD11_RS06625;Dbxref=GenBank:WP_033866309.1;Name=WP_033866309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308756.1;locus_tag=AD11_RS06625;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_033866309.1;start_range=.,1;transl_table=11 NZ_JJLL01000103.1 RefSeq gene 902 1471 . + . ID=gene-AD11_RS06630;Name=ybfC;gbkey=Gene;gene=ybfC;gene_biotype=protein_coding;locus_tag=AD11_RS06630;old_locus_tag=AD11_0755 NZ_JJLL01000103.1 Protein Homology CDS 902 1471 . + 0 ID=cds-WP_000832338.1;Parent=gene-AD11_RS06630;Dbxref=GenBank:WP_000832338.1;Name=WP_000832338.1;gbkey=CDS;gene=ybfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415232.1;locus_tag=AD11_RS06630;product=protein YbfC;protein_id=WP_000832338.1;transl_table=11 NZ_JJLL01000103.1 RefSeq pseudogene 1697 1933 . + . ID=gene-AD11_RS06635;Name=ybfQ;end_range=1933,.;gbkey=Gene;gene=ybfQ;gene_biotype=pseudogene;locus_tag=AD11_RS06635;old_locus_tag=AD11_0756;partial=true;pseudo=true NZ_JJLL01000103.1 Protein Homology CDS 1697 1933 . + 0 ID=cds-AD11_RS06635;Parent=gene-AD11_RS06635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1933,.;gbkey=CDS;gene=ybfQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS06635;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000103.1 RefSeq pseudogene 2077 2629 . + . ID=gene-AD11_RS06640;Name=AD11_RS06640;end_range=2629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS06640;old_locus_tag=AD11_0757;partial=true;pseudo=true NZ_JJLL01000103.1 Protein Homology CDS 2077 2629 . + 0 ID=cds-AD11_RS06640;Parent=gene-AD11_RS06640;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=2629,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS06640;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000104.1 1 43615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000104.1 RefSeq region 1 43615 . + . ID=NZ_JJLL01000104.1:1..43615;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000104.1 RefSeq pseudogene 13 771 . + . ID=gene-AD11_RS06645;Name=ybfD;end_range=771,.;gbkey=Gene;gene=ybfD;gene_biotype=pseudogene;locus_tag=AD11_RS06645;old_locus_tag=AD11_0758;partial=true;pseudo=true NZ_JJLL01000104.1 Protein Homology CDS 13 771 . + 0 ID=cds-AD11_RS06645;Parent=gene-AD11_RS06645;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=771,.;gbkey=CDS;gene=ybfD;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS06645;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 922 1431 . + . ID=gene-AD11_RS06650;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=AD11_RS06650;old_locus_tag=AD11_0759 NZ_JJLL01000104.1 Protein Homology CDS 922 1431 . + 0 ID=cds-WP_001076004.1;Parent=gene-AD11_RS06650;Dbxref=GenBank:WP_001076004.1;Name=WP_001076004.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706525.1;locus_tag=AD11_RS06650;product=YbgA family protein;protein_id=WP_001076004.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 1428 2846 . + . ID=gene-AD11_RS06655;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AD11_RS06655;old_locus_tag=AD11_0760 NZ_JJLL01000104.1 Protein Homology CDS 1428 2846 . + 0 ID=cds-WP_000628038.1;Parent=gene-AD11_RS06655;Dbxref=GenBank:WP_000628038.1;Name=WP_000628038.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740284.1;locus_tag=AD11_RS06655;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_000628038.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 2888 4369 . - . ID=gene-AD11_RS06660;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AD11_RS06660;old_locus_tag=AD11_0761 NZ_JJLL01000104.1 Protein Homology CDS 2888 4369 . - 0 ID=cds-WP_033865301.1;Parent=gene-AD11_RS06660;Dbxref=GenBank:WP_033865301.1;Name=WP_033865301.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706523.1;locus_tag=AD11_RS06660;product=dipeptide permease DtpD;protein_id=WP_033865301.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 4640 5383 . + . ID=gene-AD11_RS06665;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AD11_RS06665;old_locus_tag=AD11_0762 NZ_JJLL01000104.1 Protein Homology CDS 4640 5383 . + 0 ID=cds-WP_001619234.1;Parent=gene-AD11_RS06665;Dbxref=GenBank:WP_001619234.1;Name=WP_001619234.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AD11_RS06665;product=radiation resistance protein YbgI;protein_id=WP_001619234.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 5406 6062 . + . ID=gene-AD11_RS06670;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AD11_RS06670;old_locus_tag=AD11_0763 NZ_JJLL01000104.1 Protein Homology CDS 5406 6062 . + 0 ID=cds-WP_001188343.1;Parent=gene-AD11_RS06670;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AD11_RS06670;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 6056 6988 . + . ID=gene-AD11_RS06675;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AD11_RS06675;old_locus_tag=AD11_0764 NZ_JJLL01000104.1 Protein Homology CDS 6056 6988 . + 0 ID=cds-WP_032083691.1;Parent=gene-AD11_RS06675;Dbxref=GenBank:WP_032083691.1;Name=WP_032083691.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415240.1;locus_tag=AD11_RS06675;product=5-oxoprolinase subunit PxpC;protein_id=WP_032083691.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 6978 7712 . + . ID=gene-AD11_RS06680;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AD11_RS06680;old_locus_tag=AD11_0765 NZ_JJLL01000104.1 Protein Homology CDS 6978 7712 . + 0 ID=cds-WP_000687130.1;Parent=gene-AD11_RS06680;Dbxref=GenBank:WP_000687130.1;Name=WP_000687130.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415241.1;locus_tag=AD11_RS06680;product=5-oxoprolinase subunit PxpA;protein_id=WP_000687130.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 7748 8539 . + . ID=gene-AD11_RS06685;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AD11_RS06685;old_locus_tag=AD11_0766 NZ_JJLL01000104.1 Protein Homology CDS 7748 8539 . + 0 ID=cds-WP_001114026.1;Parent=gene-AD11_RS06685;Dbxref=GenBank:WP_001114026.1;Name=WP_001114026.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415242.1;locus_tag=AD11_RS06685;product=endonuclease VIII;protein_id=WP_001114026.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 8536 9582 . - . ID=gene-AD11_RS06690;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=AD11_RS06690;old_locus_tag=AD11_0767 NZ_JJLL01000104.1 Protein Homology CDS 8536 9582 . - 0 ID=cds-WP_001336221.1;Parent=gene-AD11_RS06690;Dbxref=GenBank:WP_001336221.1;Name=WP_001336221.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=abrB;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AD11_RS06690;product=AbrB family transcriptional regulator;protein_id=WP_001336221.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 9734 10795 . - . ID=gene-AD11_RS06695;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=AD11_RS06695;old_locus_tag=AD11_0768 NZ_JJLL01000104.1 Protein Homology CDS 9734 10795 . - 0 ID=cds-WP_001272410.1;Parent=gene-AD11_RS06695;Dbxref=GenBank:WP_001272410.1;Name=WP_001272410.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgO;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AD11_RS06695;product=fimbrial protein;protein_id=WP_001272410.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 10792 11520 . - . ID=gene-AD11_RS06700;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=AD11_RS06700;old_locus_tag=AD11_0769 NZ_JJLL01000104.1 Protein Homology CDS 10792 11520 . - 0 ID=cds-WP_000142799.1;Parent=gene-AD11_RS06700;Dbxref=GenBank:WP_000142799.1;Name=WP_000142799.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=ybgP;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415245.1;locus_tag=AD11_RS06700;product=fimbrial biogenesis chaperone;protein_id=WP_000142799.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 11535 13991 . - . ID=gene-AD11_RS06705;Name=ybgQ;gbkey=Gene;gene=ybgQ;gene_biotype=protein_coding;locus_tag=AD11_RS06705;old_locus_tag=AD11_0770 NZ_JJLL01000104.1 Protein Homology CDS 11535 13991 . - 0 ID=cds-WP_072131817.1;Parent=gene-AD11_RS06705;Dbxref=GenBank:WP_072131817.1;Name=WP_072131817.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=ybgQ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AD11_RS06705;product=fimbria/pilus outer membrane usher protein;protein_id=WP_072131817.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 14042 14608 . - . ID=gene-AD11_RS06710;Name=AD11_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06710;old_locus_tag=AD11_0771 NZ_JJLL01000104.1 Protein Homology CDS 14042 14608 . - 0 ID=cds-WP_000472430.1;Parent=gene-AD11_RS06710;Dbxref=GenBank:WP_000472430.1;Name=WP_000472430.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706515.1;locus_tag=AD11_RS06710;product=fimbrial protein;protein_id=WP_000472430.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 14998 16281 . - . ID=gene-AD11_RS06715;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AD11_RS06715;old_locus_tag=AD11_0773 NZ_JJLL01000104.1 Protein Homology CDS 14998 16281 . - 0 ID=cds-WP_000785834.1;Parent=gene-AD11_RS06715;Dbxref=GenBank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AD11_RS06715;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 16487 16594 . - . ID=gene-AD11_RS31445;Name=AD11_RS31445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31445 NZ_JJLL01000104.1 Protein Homology CDS 16487 16594 . - 0 ID=cds-WP_001305582.1;Parent=gene-AD11_RS31445;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AD11_RS31445;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 16975 17379 . + . ID=gene-AD11_RS06725;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AD11_RS06725;old_locus_tag=AD11_0774 NZ_JJLL01000104.1 Protein Homology CDS 16975 17379 . + 0 ID=cds-WP_000263347.1;Parent=gene-AD11_RS06725;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AD11_RS06725;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 17373 17720 . + . ID=gene-AD11_RS06730;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AD11_RS06730;old_locus_tag=AD11_0775 NZ_JJLL01000104.1 Protein Homology CDS 17373 17720 . + 0 ID=cds-WP_000254365.1;Parent=gene-AD11_RS06730;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AD11_RS06730;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 17720 19486 . + . ID=gene-AD11_RS06735;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AD11_RS06735;old_locus_tag=AD11_0776 NZ_JJLL01000104.1 Protein Homology CDS 17720 19486 . + 0 ID=cds-WP_000775540.1;Parent=gene-AD11_RS06735;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AD11_RS06735;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 19502 20218 . + . ID=gene-AD11_RS06740;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AD11_RS06740;old_locus_tag=AD11_0777 NZ_JJLL01000104.1 Protein Homology CDS 19502 20218 . + 0 ID=cds-WP_001235263.1;Parent=gene-AD11_RS06740;Dbxref=GenBank:WP_001235263.1;Name=WP_001235263.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AD11_RS06740;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235263.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 20419 23220 . + . ID=gene-AD11_RS06750;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AD11_RS06750;old_locus_tag=AD11_0778 NZ_JJLL01000104.1 Protein Homology CDS 20419 23220 . + 0 ID=cds-WP_001181473.1;Parent=gene-AD11_RS06750;Dbxref=GenBank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AD11_RS06750;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 23235 24452 . + . ID=gene-AD11_RS06755;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AD11_RS06755;old_locus_tag=AD11_0779 NZ_JJLL01000104.1 Protein Homology CDS 23235 24452 . + 0 ID=cds-WP_000099823.1;Parent=gene-AD11_RS06755;Dbxref=GenBank:WP_000099823.1;Name=WP_000099823.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AD11_RS06755;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_000099823.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 24818 25984 . + . ID=gene-AD11_RS06760;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AD11_RS06760;old_locus_tag=AD11_0780 NZ_JJLL01000104.1 Protein Homology CDS 24818 25984 . + 0 ID=cds-WP_001048602.1;Parent=gene-AD11_RS06760;Dbxref=GenBank:WP_001048602.1;Name=WP_001048602.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AD11_RS06760;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048602.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 25984 26853 . + . ID=gene-AD11_RS06765;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AD11_RS06765;old_locus_tag=AD11_0781 NZ_JJLL01000104.1 Protein Homology CDS 25984 26853 . + 0 ID=cds-WP_000025458.1;Parent=gene-AD11_RS06765;Dbxref=GenBank:WP_000025458.1;Name=WP_000025458.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AD11_RS06765;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 26957 27679 . - . ID=gene-AD11_RS06770;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AD11_RS06770;old_locus_tag=AD11_0782 NZ_JJLL01000104.1 Protein Homology CDS 26957 27679 . - 0 ID=cds-WP_000509902.1;Parent=gene-AD11_RS06770;Dbxref=GenBank:WP_000509902.1;Name=WP_000509902.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AD11_RS06770;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509902.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 27848 29764 . + . ID=gene-AD11_RS06775;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AD11_RS06775;old_locus_tag=AD11_0783 NZ_JJLL01000104.1 Protein Homology CDS 27848 29764 . + 0 ID=cds-WP_033865337.1;Parent=gene-AD11_RS06775;Dbxref=GenBank:WP_033865337.1;Name=WP_033865337.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=AD11_RS06775;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_033865337.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 29782 32415 . + . ID=gene-AD11_RS06780;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=AD11_RS06780;old_locus_tag=AD11_0784 NZ_JJLL01000104.1 Protein Homology CDS 29782 32415 . + 0 ID=cds-WP_000648976.1;Parent=gene-AD11_RS06780;Dbxref=GenBank:WP_000648976.1;Name=WP_000648976.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AD11_RS06780;product=mannosylglycerate hydrolase;protein_id=WP_000648976.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 33262 34830 . + . ID=gene-AD11_RS06790;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AD11_RS06790;old_locus_tag=AD11_0786 NZ_JJLL01000104.1 Protein Homology CDS 33262 34830 . + 0 ID=cds-WP_000884361.1;Parent=gene-AD11_RS06790;Dbxref=GenBank:WP_000884361.1;Name=WP_000884361.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AD11_RS06790;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 34846 35985 . + . ID=gene-AD11_RS06795;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AD11_RS06795;old_locus_tag=AD11_0787 NZ_JJLL01000104.1 Protein Homology CDS 34846 35985 . + 0 ID=cds-WP_000568275.1;Parent=gene-AD11_RS06795;Dbxref=GenBank:WP_000568275.1;Name=WP_000568275.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AD11_RS06795;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568275.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 36000 36113 . + . ID=gene-AD11_RS06800;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AD11_RS06800;old_locus_tag=AD11_0788 NZ_JJLL01000104.1 Protein Homology CDS 36000 36113 . + 0 ID=cds-WP_000270282.1;Parent=gene-AD11_RS06800;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AD11_RS06800;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 36113 36406 . + . ID=gene-AD11_RS06805;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AD11_RS06805;old_locus_tag=AD11_0789 NZ_JJLL01000104.1 Protein Homology CDS 36113 36406 . + 0 ID=cds-WP_000034602.1;Parent=gene-AD11_RS06805;Dbxref=GenBank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AD11_RS06805;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 36556 36960 . + . ID=gene-AD11_RS06810;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AD11_RS06810;old_locus_tag=AD11_0790 NZ_JJLL01000104.1 Protein Homology CDS 36556 36960 . + 0 ID=cds-WP_001098384.1;Parent=gene-AD11_RS06810;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AD11_RS06810;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 36957 37649 . + . ID=gene-AD11_RS06815;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AD11_RS06815;old_locus_tag=AD11_0791 NZ_JJLL01000104.1 Protein Homology CDS 36957 37649 . + 0 ID=cds-WP_000131314.1;Parent=gene-AD11_RS06815;Dbxref=GenBank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AD11_RS06815;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 37653 38081 . + . ID=gene-AD11_RS06820;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AD11_RS06820;old_locus_tag=AD11_0792 NZ_JJLL01000104.1 Protein Homology CDS 37653 38081 . + 0 ID=cds-WP_000090097.1;Parent=gene-AD11_RS06820;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AD11_RS06820;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 38146 39411 . + . ID=gene-AD11_RS06825;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AD11_RS06825;old_locus_tag=AD11_0793 NZ_JJLL01000104.1 Protein Homology CDS 38146 39411 . + 0 ID=cds-WP_000030637.1;Parent=gene-AD11_RS06825;Dbxref=GenBank:WP_000030637.1;Name=WP_000030637.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AD11_RS06825;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 39544 40836 . + . ID=gene-AD11_RS06830;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AD11_RS06830;old_locus_tag=AD11_0794 NZ_JJLL01000104.1 Protein Homology CDS 39544 40836 . + 0 ID=cds-WP_001295307.1;Parent=gene-AD11_RS06830;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AD11_RS06830;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 40871 41392 . + . ID=gene-AD11_RS06835;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AD11_RS06835;old_locus_tag=AD11_0795 NZ_JJLL01000104.1 Protein Homology CDS 40871 41392 . + 0 ID=cds-WP_001295306.1;Parent=gene-AD11_RS06835;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AD11_RS06835;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 41402 42193 . + . ID=gene-AD11_RS06840;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AD11_RS06840;old_locus_tag=AD11_0796 NZ_JJLL01000104.1 Protein Homology CDS 41402 42193 . + 0 ID=cds-WP_000097580.1;Parent=gene-AD11_RS06840;Dbxref=GenBank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AD11_RS06840;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11 NZ_JJLL01000104.1 RefSeq gene 42358 42433 . + . ID=gene-AD11_RS06845;Name=AD11_RS06845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06845;old_locus_tag=AD11_0797 NZ_JJLL01000104.1 tRNAscan-SE tRNA 42358 42433 . + . ID=rna-AD11_RS06845;Parent=gene-AD11_RS06845;anticodon=(pos:42391..42393);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06845;product=tRNA-Lys NZ_JJLL01000104.1 tRNAscan-SE exon 42358 42433 . + . ID=exon-AD11_RS06845-1;Parent=rna-AD11_RS06845;anticodon=(pos:42391..42393);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06845;product=tRNA-Lys NZ_JJLL01000104.1 RefSeq gene 42569 42644 . + . ID=gene-AD11_RS06850;Name=AD11_RS06850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06850;old_locus_tag=AD11_0798 NZ_JJLL01000104.1 tRNAscan-SE tRNA 42569 42644 . + . ID=rna-AD11_RS06850;Parent=gene-AD11_RS06850;anticodon=(pos:42602..42604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06850;product=tRNA-Val NZ_JJLL01000104.1 tRNAscan-SE exon 42569 42644 . + . ID=exon-AD11_RS06850-1;Parent=rna-AD11_RS06850;anticodon=(pos:42602..42604);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06850;product=tRNA-Val NZ_JJLL01000104.1 RefSeq gene 42647 42722 . + . ID=gene-AD11_RS06855;Name=AD11_RS06855;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06855;old_locus_tag=AD11_0799 NZ_JJLL01000104.1 tRNAscan-SE tRNA 42647 42722 . + . ID=rna-AD11_RS06855;Parent=gene-AD11_RS06855;anticodon=(pos:42680..42682);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06855;product=tRNA-Lys NZ_JJLL01000104.1 tRNAscan-SE exon 42647 42722 . + . ID=exon-AD11_RS06855-1;Parent=rna-AD11_RS06855;anticodon=(pos:42680..42682);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06855;product=tRNA-Lys NZ_JJLL01000104.1 RefSeq gene 42858 42933 . + . ID=gene-AD11_RS06860;Name=AD11_RS06860;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06860;old_locus_tag=AD11_0800 NZ_JJLL01000104.1 tRNAscan-SE tRNA 42858 42933 . + . ID=rna-AD11_RS06860;Parent=gene-AD11_RS06860;anticodon=(pos:42891..42893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06860;product=tRNA-Val NZ_JJLL01000104.1 tRNAscan-SE exon 42858 42933 . + . ID=exon-AD11_RS06860-1;Parent=rna-AD11_RS06860;anticodon=(pos:42891..42893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06860;product=tRNA-Val NZ_JJLL01000104.1 RefSeq gene 42936 43011 . + . ID=gene-AD11_RS06865;Name=AD11_RS06865;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06865;old_locus_tag=AD11_0801 NZ_JJLL01000104.1 tRNAscan-SE tRNA 42936 43011 . + . ID=rna-AD11_RS06865;Parent=gene-AD11_RS06865;anticodon=(pos:42969..42971);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06865;product=tRNA-Lys NZ_JJLL01000104.1 tRNAscan-SE exon 42936 43011 . + . ID=exon-AD11_RS06865-1;Parent=rna-AD11_RS06865;anticodon=(pos:42969..42971);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06865;product=tRNA-Lys NZ_JJLL01000104.1 RefSeq gene 43063 43138 . + . ID=gene-AD11_RS06870;Name=AD11_RS06870;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06870;old_locus_tag=AD11_0802 NZ_JJLL01000104.1 tRNAscan-SE tRNA 43063 43138 . + . ID=rna-AD11_RS06870;Parent=gene-AD11_RS06870;anticodon=(pos:43096..43098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06870;product=tRNA-Val NZ_JJLL01000104.1 tRNAscan-SE exon 43063 43138 . + . ID=exon-AD11_RS06870-1;Parent=rna-AD11_RS06870;anticodon=(pos:43096..43098);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06870;product=tRNA-Val NZ_JJLL01000104.1 RefSeq gene 43141 43216 . + . ID=gene-AD11_RS06875;Name=AD11_RS06875;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06875;old_locus_tag=AD11_0803 NZ_JJLL01000104.1 tRNAscan-SE tRNA 43141 43216 . + . ID=rna-AD11_RS06875;Parent=gene-AD11_RS06875;anticodon=(pos:43174..43176);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06875;product=tRNA-Lys NZ_JJLL01000104.1 tRNAscan-SE exon 43141 43216 . + . ID=exon-AD11_RS06875-1;Parent=rna-AD11_RS06875;anticodon=(pos:43174..43176);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06875;product=tRNA-Lys NZ_JJLL01000104.1 RefSeq gene 43268 43343 . + . ID=gene-AD11_RS06880;Name=AD11_RS06880;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06880;old_locus_tag=AD11_0804 NZ_JJLL01000104.1 tRNAscan-SE tRNA 43268 43343 . + . ID=rna-AD11_RS06880;Parent=gene-AD11_RS06880;anticodon=(pos:43301..43303);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06880;product=tRNA-Val NZ_JJLL01000104.1 tRNAscan-SE exon 43268 43343 . + . ID=exon-AD11_RS06880-1;Parent=rna-AD11_RS06880;anticodon=(pos:43301..43303);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06880;product=tRNA-Val NZ_JJLL01000104.1 RefSeq gene 43346 43421 . + . ID=gene-AD11_RS06885;Name=AD11_RS06885;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06885;old_locus_tag=AD11_0805 NZ_JJLL01000104.1 tRNAscan-SE tRNA 43346 43421 . + . ID=rna-AD11_RS06885;Parent=gene-AD11_RS06885;anticodon=(pos:43379..43381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06885;product=tRNA-Lys NZ_JJLL01000104.1 tRNAscan-SE exon 43346 43421 . + . ID=exon-AD11_RS06885-1;Parent=rna-AD11_RS06885;anticodon=(pos:43379..43381);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06885;product=tRNA-Lys ##sequence-region NZ_JJLL01000105.1 1 5154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000105.1 RefSeq region 1 5154 . + . ID=NZ_JJLL01000105.1:1..5154;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000105.1 RefSeq gene 174 1286 . - . ID=gene-AD11_RS06900;Name=AD11_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06900;old_locus_tag=AD11_0807 NZ_JJLL01000105.1 Protein Homology CDS 174 1286 . - 0 ID=cds-WP_001300563.1-3;Parent=gene-AD11_RS06900;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS06900;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JJLL01000105.1 RefSeq gene 1364 1516 . - . ID=gene-AD11_RS06905;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AD11_RS06905;old_locus_tag=AD11_0808 NZ_JJLL01000105.1 Protein Homology CDS 1364 1516 . - 0 ID=cds-WP_000809168.1;Parent=gene-AD11_RS06905;Dbxref=GenBank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AD11_RS06905;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11 NZ_JJLL01000105.1 RefSeq gene 2102 3268 . + . ID=gene-AD11_RS06910;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AD11_RS06910;old_locus_tag=AD11_0809 NZ_JJLL01000105.1 Protein Homology CDS 2102 3268 . + 0 ID=cds-WP_000681354.1;Parent=gene-AD11_RS06910;Dbxref=GenBank:WP_000681354.1;Name=WP_000681354.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414560.1;locus_tag=AD11_RS06910;product=Na+/H+ antiporter NhaA;protein_id=WP_000681354.1;transl_table=11 NZ_JJLL01000105.1 RefSeq gene 3334 4233 . + . ID=gene-AD11_RS06915;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AD11_RS06915;old_locus_tag=AD11_0810 NZ_JJLL01000105.1 Protein Homology CDS 3334 4233 . + 0 ID=cds-WP_001338226.1;Parent=gene-AD11_RS06915;Dbxref=GenBank:WP_001338226.1;Name=WP_001338226.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AD11_RS06915;product=transcriptional activator NhaR;protein_id=WP_001338226.1;transl_table=11 NZ_JJLL01000105.1 RefSeq pseudogene 4271 4408 . - . ID=gene-AD11_RS32030;Name=AD11_RS32030;end_range=4408,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32030;partial=true;pseudo=true NZ_JJLL01000105.1 Protein Homology CDS 4271 4408 . - 0 ID=cds-AD11_RS32030;Parent=gene-AD11_RS32030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AD11_RS32030;partial=true;product=fimbrial family protein;pseudo=true;transl_table=11 NZ_JJLL01000105.1 RefSeq gene 4424 5127 . - . ID=gene-AD11_RS06920;Name=AD11_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS06920;old_locus_tag=AD11_0811 NZ_JJLL01000105.1 Protein Homology CDS 4878 5127 . - 0 ID=cds-WP_248784878.1;Parent=gene-AD11_RS06920;Dbxref=GenBank:WP_248784878.1;Name=WP_248784878.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS06920;product=IS1-like element IS1A family transposase;protein_id=WP_248784878.1;transl_table=11 NZ_JJLL01000105.1 Protein Homology CDS 4424 4878 . - 2 ID=cds-WP_248784878.1;Parent=gene-AD11_RS06920;Dbxref=GenBank:WP_248784878.1;Name=WP_248784878.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS06920;product=IS1-like element IS1A family transposase;protein_id=WP_248784878.1;transl_table=11 ##sequence-region NZ_JJLL01000106.1 1 1496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000106.1 RefSeq region 1 1496 . + . ID=NZ_JJLL01000106.1:1..1496;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000106.1 RefSeq gene 51 126 . + . ID=gene-AD11_RS06925;Name=AD11_RS06925;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06925;old_locus_tag=AD11_0812 NZ_JJLL01000106.1 tRNAscan-SE tRNA 51 126 . + . ID=rna-AD11_RS06925;Parent=gene-AD11_RS06925;anticodon=(pos:84..86);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06925;product=tRNA-Lys NZ_JJLL01000106.1 tRNAscan-SE exon 51 126 . + . ID=exon-AD11_RS06925-1;Parent=rna-AD11_RS06925;anticodon=(pos:84..86);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06925;product=tRNA-Lys NZ_JJLL01000106.1 RefSeq gene 273 348 . + . ID=gene-AD11_RS06930;Name=AD11_RS06930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06930;old_locus_tag=AD11_0813 NZ_JJLL01000106.1 tRNAscan-SE tRNA 273 348 . + . ID=rna-AD11_RS06930;Parent=gene-AD11_RS06930;anticodon=(pos:306..308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06930;product=tRNA-Lys NZ_JJLL01000106.1 tRNAscan-SE exon 273 348 . + . ID=exon-AD11_RS06930-1;Parent=rna-AD11_RS06930;anticodon=(pos:306..308);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06930;product=tRNA-Lys NZ_JJLL01000106.1 RefSeq gene 495 570 . + . ID=gene-AD11_RS06935;Name=AD11_RS06935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06935;old_locus_tag=AD11_0814 NZ_JJLL01000106.1 tRNAscan-SE tRNA 495 570 . + . ID=rna-AD11_RS06935;Parent=gene-AD11_RS06935;anticodon=(pos:528..530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06935;product=tRNA-Lys NZ_JJLL01000106.1 tRNAscan-SE exon 495 570 . + . ID=exon-AD11_RS06935-1;Parent=rna-AD11_RS06935;anticodon=(pos:528..530);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06935;product=tRNA-Lys NZ_JJLL01000106.1 RefSeq gene 703 778 . + . ID=gene-AD11_RS06940;Name=AD11_RS06940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06940;old_locus_tag=AD11_0815 NZ_JJLL01000106.1 tRNAscan-SE tRNA 703 778 . + . ID=rna-AD11_RS06940;Parent=gene-AD11_RS06940;anticodon=(pos:736..738);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06940;product=tRNA-Lys NZ_JJLL01000106.1 tRNAscan-SE exon 703 778 . + . ID=exon-AD11_RS06940-1;Parent=rna-AD11_RS06940;anticodon=(pos:736..738);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06940;product=tRNA-Lys NZ_JJLL01000106.1 RefSeq gene 911 986 . + . ID=gene-AD11_RS06945;Name=AD11_RS06945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06945;old_locus_tag=AD11_0816 NZ_JJLL01000106.1 tRNAscan-SE tRNA 911 986 . + . ID=rna-AD11_RS06945;Parent=gene-AD11_RS06945;anticodon=(pos:944..946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06945;product=tRNA-Lys NZ_JJLL01000106.1 tRNAscan-SE exon 911 986 . + . ID=exon-AD11_RS06945-1;Parent=rna-AD11_RS06945;anticodon=(pos:944..946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06945;product=tRNA-Lys NZ_JJLL01000106.1 RefSeq gene 1264 1496 . + . ID=gene-AD11_RS06950;Name=nadA;end_range=1496,.;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AD11_RS06950;old_locus_tag=AD11_0817;partial=true NZ_JJLL01000106.1 Protein Homology CDS 1264 1496 . + 0 ID=cds-WP_032263599.1;Parent=gene-AD11_RS06950;Dbxref=GenBank:WP_032263599.1;Name=WP_032263599.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;end_range=1496,.;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308805.1;locus_tag=AD11_RS06950;partial=true;product=quinolinate synthase NadA;protein_id=WP_032263599.1;transl_table=11 ##sequence-region NZ_JJLL01000107.1 1 1425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000107.1 RefSeq region 1 1425 . + . ID=NZ_JJLL01000107.1:1..1425;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000107.1 RefSeq gene 94 169 . + . ID=gene-AD11_RS06965;Name=AD11_RS06965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06965;old_locus_tag=AD11_0819 NZ_JJLL01000107.1 tRNAscan-SE tRNA 94 169 . + . ID=rna-AD11_RS06965;Parent=gene-AD11_RS06965;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06965;product=tRNA-Val NZ_JJLL01000107.1 tRNAscan-SE exon 94 169 . + . ID=exon-AD11_RS06965-1;Parent=rna-AD11_RS06965;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06965;product=tRNA-Val NZ_JJLL01000107.1 RefSeq gene 214 289 . + . ID=gene-AD11_RS06970;Name=AD11_RS06970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06970;old_locus_tag=AD11_0820 NZ_JJLL01000107.1 tRNAscan-SE tRNA 214 289 . + . ID=rna-AD11_RS06970;Parent=gene-AD11_RS06970;anticodon=(pos:247..249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06970;product=tRNA-Val NZ_JJLL01000107.1 tRNAscan-SE exon 214 289 . + . ID=exon-AD11_RS06970-1;Parent=rna-AD11_RS06970;anticodon=(pos:247..249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06970;product=tRNA-Val NZ_JJLL01000107.1 RefSeq gene 334 409 . + . ID=gene-AD11_RS06975;Name=AD11_RS06975;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06975;old_locus_tag=AD11_0821 NZ_JJLL01000107.1 tRNAscan-SE tRNA 334 409 . + . ID=rna-AD11_RS06975;Parent=gene-AD11_RS06975;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06975;product=tRNA-Val NZ_JJLL01000107.1 tRNAscan-SE exon 334 409 . + . ID=exon-AD11_RS06975-1;Parent=rna-AD11_RS06975;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06975;product=tRNA-Val NZ_JJLL01000107.1 RefSeq gene 412 487 . + . ID=gene-AD11_RS06980;Name=AD11_RS06980;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06980;old_locus_tag=AD11_0822 NZ_JJLL01000107.1 tRNAscan-SE tRNA 412 487 . + . ID=rna-AD11_RS06980;Parent=gene-AD11_RS06980;anticodon=(pos:445..447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06980;product=tRNA-Lys NZ_JJLL01000107.1 tRNAscan-SE exon 412 487 . + . ID=exon-AD11_RS06980-1;Parent=rna-AD11_RS06980;anticodon=(pos:445..447);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06980;product=tRNA-Lys NZ_JJLL01000107.1 RefSeq gene 539 614 . + . ID=gene-AD11_RS06985;Name=AD11_RS06985;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06985;old_locus_tag=AD11_0823 NZ_JJLL01000107.1 tRNAscan-SE tRNA 539 614 . + . ID=rna-AD11_RS06985;Parent=gene-AD11_RS06985;anticodon=(pos:572..574);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06985;product=tRNA-Val NZ_JJLL01000107.1 tRNAscan-SE exon 539 614 . + . ID=exon-AD11_RS06985-1;Parent=rna-AD11_RS06985;anticodon=(pos:572..574);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06985;product=tRNA-Val NZ_JJLL01000107.1 RefSeq gene 618 693 . + . ID=gene-AD11_RS06990;Name=AD11_RS06990;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06990;old_locus_tag=AD11_0824 NZ_JJLL01000107.1 tRNAscan-SE tRNA 618 693 . + . ID=rna-AD11_RS06990;Parent=gene-AD11_RS06990;anticodon=(pos:651..653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06990;product=tRNA-Lys NZ_JJLL01000107.1 tRNAscan-SE exon 618 693 . + . ID=exon-AD11_RS06990-1;Parent=rna-AD11_RS06990;anticodon=(pos:651..653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06990;product=tRNA-Lys NZ_JJLL01000107.1 RefSeq gene 840 915 . + . ID=gene-AD11_RS06995;Name=AD11_RS06995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS06995;old_locus_tag=AD11_0825 NZ_JJLL01000107.1 tRNAscan-SE tRNA 840 915 . + . ID=rna-AD11_RS06995;Parent=gene-AD11_RS06995;anticodon=(pos:873..875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06995;product=tRNA-Lys NZ_JJLL01000107.1 tRNAscan-SE exon 840 915 . + . ID=exon-AD11_RS06995-1;Parent=rna-AD11_RS06995;anticodon=(pos:873..875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS06995;product=tRNA-Lys NZ_JJLL01000107.1 RefSeq gene 1193 1425 . + . ID=gene-AD11_RS07000;Name=nadA;end_range=1425,.;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AD11_RS07000;old_locus_tag=AD11_0826;partial=true NZ_JJLL01000107.1 Protein Homology CDS 1193 1425 . + 0 ID=cds-WP_032263599.1-2;Parent=gene-AD11_RS07000;Dbxref=GenBank:WP_032263599.1;Name=WP_032263599.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;end_range=1425,.;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308805.1;locus_tag=AD11_RS07000;partial=true;product=quinolinate synthase NadA;protein_id=WP_032263599.1;transl_table=11 ##sequence-region NZ_JJLL01000108.1 1 426822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000108.1 RefSeq region 1 426822 . + . ID=NZ_JJLL01000108.1:1..426822;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000108.1 RefSeq gene 291 1334 . + . ID=gene-AD11_RS07005;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AD11_RS07005;old_locus_tag=AD11_0827 NZ_JJLL01000108.1 Protein Homology CDS 291 1334 . + 0 ID=cds-WP_000115290.1;Parent=gene-AD11_RS07005;Dbxref=GenBank:WP_000115290.1;Name=WP_000115290.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AD11_RS07005;product=quinolinate synthase NadA;protein_id=WP_000115290.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 1372 2091 . + . ID=gene-AD11_RS07010;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AD11_RS07010;old_locus_tag=AD11_0828 NZ_JJLL01000108.1 Protein Homology CDS 1372 2091 . + 0 ID=cds-WP_000345410.1;Parent=gene-AD11_RS07010;Dbxref=GenBank:WP_000345410.1;Name=WP_000345410.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AD11_RS07010;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345410.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 2088 3029 . - . ID=gene-AD11_RS07015;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AD11_RS07015;old_locus_tag=AD11_0829 NZ_JJLL01000108.1 Protein Homology CDS 2088 3029 . - 0 ID=cds-WP_000951292.1;Parent=gene-AD11_RS07015;Dbxref=GenBank:WP_000951292.1;Name=WP_000951292.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AD11_RS07015;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 3143 3523 . - . ID=gene-AD11_RS07020;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AD11_RS07020;old_locus_tag=AD11_0830 NZ_JJLL01000108.1 Protein Homology CDS 3143 3523 . - 0 ID=cds-WP_000784351.1;Parent=gene-AD11_RS07020;Dbxref=GenBank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AD11_RS07020;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 3839 4891 . + . ID=gene-AD11_RS07030;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AD11_RS07030;old_locus_tag=AD11_0831 NZ_JJLL01000108.1 Protein Homology CDS 3839 4891 . + 0 ID=cds-WP_001109196.1;Parent=gene-AD11_RS07030;Dbxref=GenBank:WP_001109196.1;Name=WP_001109196.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AD11_RS07030;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109196.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 5049 5801 . - . ID=gene-AD11_RS07035;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AD11_RS07035;old_locus_tag=AD11_0832 NZ_JJLL01000108.1 Protein Homology CDS 5049 5801 . - 0 ID=cds-WP_001295305.1;Parent=gene-AD11_RS07035;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AD11_RS07035;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 6003 7043 . - . ID=gene-AD11_RS07040;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AD11_RS07040;old_locus_tag=AD11_0833 NZ_JJLL01000108.1 Protein Homology CDS 6003 7043 . - 0 ID=cds-WP_000931389.1;Parent=gene-AD11_RS07040;Dbxref=GenBank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AD11_RS07040;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 7037 8185 . - . ID=gene-AD11_RS07045;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AD11_RS07045;old_locus_tag=AD11_0834 NZ_JJLL01000108.1 Protein Homology CDS 7037 8185 . - 0 ID=cds-WP_000053415.1;Parent=gene-AD11_RS07045;Dbxref=GenBank:WP_000053415.1;Name=WP_000053415.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AD11_RS07045;product=galactokinase;protein_id=WP_000053415.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 8189 9235 . - . ID=gene-AD11_RS07050;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AD11_RS07050;old_locus_tag=AD11_0835 NZ_JJLL01000108.1 Protein Homology CDS 8189 9235 . - 0 ID=cds-WP_000191496.1;Parent=gene-AD11_RS07050;Dbxref=GenBank:WP_000191496.1;Name=WP_000191496.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415279.1;locus_tag=AD11_RS07050;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191496.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 9245 10261 . - . ID=gene-AD11_RS07055;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AD11_RS07055;old_locus_tag=AD11_0836 NZ_JJLL01000108.1 Protein Homology CDS 9245 10261 . - 0 ID=cds-WP_001265438.1;Parent=gene-AD11_RS07055;Dbxref=GenBank:WP_001265438.1;Name=WP_001265438.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AD11_RS07055;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265438.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 10522 11994 . - . ID=gene-AD11_RS07060;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AD11_RS07060;old_locus_tag=AD11_0837 NZ_JJLL01000108.1 Protein Homology CDS 10522 11994 . - 0 ID=cds-WP_000096869.1;Parent=gene-AD11_RS07060;Dbxref=GenBank:WP_000096869.1;Name=WP_000096869.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AD11_RS07060;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_000096869.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 12062 12850 . - . ID=gene-AD11_RS07070;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AD11_RS07070;old_locus_tag=AD11_0838 NZ_JJLL01000108.1 Protein Homology CDS 12062 12850 . - 0 ID=cds-WP_001147439.1;Parent=gene-AD11_RS07070;Dbxref=GenBank:WP_001147439.1;Name=WP_001147439.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AD11_RS07070;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 12979 13128 . + . ID=gene-AD11_RS07075;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AD11_RS07075;old_locus_tag=AD11_0839 NZ_JJLL01000108.1 Protein Homology CDS 12979 13128 . + 0 ID=cds-WP_000891515.1;Parent=gene-AD11_RS07075;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AD11_RS07075;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 13295 14068 . + . ID=gene-AD11_RS07080;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AD11_RS07080;old_locus_tag=AD11_0840 NZ_JJLL01000108.1 Protein Homology CDS 13295 14068 . + 0 ID=cds-WP_000101984.1;Parent=gene-AD11_RS07080;Dbxref=GenBank:WP_000101984.1;Name=WP_000101984.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415284.1;locus_tag=AD11_RS07080;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101984.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 14068 14757 . + . ID=gene-AD11_RS07085;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AD11_RS07085;old_locus_tag=AD11_0841 NZ_JJLL01000108.1 Protein Homology CDS 14068 14757 . + 0 ID=cds-WP_000604034.1;Parent=gene-AD11_RS07085;Dbxref=GenBank:WP_000604034.1;Name=WP_000604034.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AD11_RS07085;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 14760 15818 . + . ID=gene-AD11_RS07090;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AD11_RS07090;old_locus_tag=AD11_0842 NZ_JJLL01000108.1 Protein Homology CDS 14760 15818 . + 0 ID=cds-WP_000891692.1;Parent=gene-AD11_RS07090;Dbxref=GenBank:WP_000891692.1;Name=WP_000891692.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AD11_RS07090;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 15819 16637 . - . ID=gene-AD11_RS07095;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AD11_RS07095;old_locus_tag=AD11_0843 NZ_JJLL01000108.1 Protein Homology CDS 15819 16637 . - 0 ID=cds-WP_001300666.1;Parent=gene-AD11_RS07095;Dbxref=GenBank:WP_001300666.1;Name=WP_001300666.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415287.1;locus_tag=AD11_RS07095;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_001300666.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 16792 17787 . + . ID=gene-AD11_RS07100;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AD11_RS07100;old_locus_tag=AD11_0844 NZ_JJLL01000108.1 Protein Homology CDS 16792 17787 . + 0 ID=cds-WP_000815435.1;Parent=gene-AD11_RS07100;Dbxref=GenBank:WP_000815435.1;Name=WP_000815435.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AD11_RS07100;product=6-phosphogluconolactonase;protein_id=WP_000815435.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 17828 18781 . - . ID=gene-AD11_RS07105;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=AD11_RS07105;old_locus_tag=AD11_0845 NZ_JJLL01000108.1 Protein Homology CDS 17828 18781 . - 0 ID=cds-WP_000679972.1;Parent=gene-AD11_RS07105;Dbxref=GenBank:WP_000679972.1;Name=WP_000679972.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=ybhD;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AD11_RS07105;product=LysR family transcriptional regulator;protein_id=WP_000679972.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 18965 20017 . + . ID=gene-AD11_RS07110;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=AD11_RS07110;old_locus_tag=AD11_0847 NZ_JJLL01000108.1 Protein Homology CDS 18965 20017 . + 0 ID=cds-WP_000723652.1;Parent=gene-AD11_RS07110;Dbxref=GenBank:WP_000723652.1;Name=WP_000723652.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AD11_RS07110;product=4-oxalomesaconate tautomerase;protein_id=WP_000723652.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 20093 21526 . + . ID=gene-AD11_RS07115;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=protein_coding;locus_tag=AD11_RS07115;old_locus_tag=AD11_0848 NZ_JJLL01000108.1 Protein Homology CDS 20093 21526 . + 0 ID=cds-WP_033865303.1;Parent=gene-AD11_RS07115;Dbxref=GenBank:WP_033865303.1;Name=WP_033865303.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;gene=ybhI;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=AD11_RS07115;product=anion permease;protein_id=WP_033865303.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 21709 23970 . + . ID=gene-AD11_RS07120;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=AD11_RS07120;old_locus_tag=AD11_0849 NZ_JJLL01000108.1 Protein Homology CDS 21709 23970 . + 0 ID=cds-WP_000593938.1;Parent=gene-AD11_RS07120;Dbxref=GenBank:WP_000593938.1;Name=WP_000593938.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415292.2;locus_tag=AD11_RS07120;product=hydratase;protein_id=WP_000593938.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 24483 25766 . - . ID=gene-AD11_RS07125;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AD11_RS07125;old_locus_tag=AD11_0850 NZ_JJLL01000108.1 Protein Homology CDS 24483 25766 . - 0 ID=cds-WP_001091569.1;Parent=gene-AD11_RS07125;Dbxref=GenBank:WP_001091569.1;Name=WP_001091569.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AD11_RS07125;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 25918 26394 . - . ID=gene-AD11_RS07130;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AD11_RS07130;old_locus_tag=AD11_0851 NZ_JJLL01000108.1 Protein Homology CDS 25918 26394 . - 0 ID=cds-WP_000767389.1;Parent=gene-AD11_RS07130;Dbxref=GenBank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AD11_RS07130;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 26453 27742 . - . ID=gene-AD11_RS07135;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AD11_RS07135;old_locus_tag=AD11_0852 NZ_JJLL01000108.1 Protein Homology CDS 26453 27742 . - 0 ID=cds-WP_071998683.1;Parent=gene-AD11_RS07135;Dbxref=GenBank:WP_071998683.1;Name=WP_071998683.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415295.1;locus_tag=AD11_RS07135;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_071998683.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 27829 28869 . + . ID=gene-AD11_RS07140;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AD11_RS07140;old_locus_tag=AD11_0853 NZ_JJLL01000108.1 Protein Homology CDS 27829 28869 . + 0 ID=cds-WP_000951213.1;Parent=gene-AD11_RS07140;Dbxref=GenBank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AD11_RS07140;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 28866 30020 . + . ID=gene-AD11_RS07145;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AD11_RS07145;old_locus_tag=AD11_0854 NZ_JJLL01000108.1 Protein Homology CDS 28866 30020 . + 0 ID=cds-WP_000118826.1;Parent=gene-AD11_RS07145;Dbxref=GenBank:WP_000118826.1;Name=WP_000118826.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415297.1;locus_tag=AD11_RS07145;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 30007 30762 . + . ID=gene-AD11_RS07150;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AD11_RS07150;old_locus_tag=AD11_0855 NZ_JJLL01000108.1 Protein Homology CDS 30007 30762 . + 0 ID=cds-WP_000246761.1;Parent=gene-AD11_RS07150;Dbxref=GenBank:WP_000246761.1;Name=WP_000246761.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AD11_RS07150;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 30755 31432 . + . ID=gene-AD11_RS07155;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD11_RS07155;old_locus_tag=AD11_0856 NZ_JJLL01000108.1 Protein Homology CDS 30755 31432 . + 0 ID=cds-WP_000044843.1;Parent=gene-AD11_RS07155;Dbxref=GenBank:WP_000044843.1;Name=WP_000044843.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415299.1;locus_tag=AD11_RS07155;product=dethiobiotin synthase;protein_id=WP_000044843.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 32011 34032 . + . ID=gene-AD11_RS07160;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AD11_RS07160;old_locus_tag=AD11_0857 NZ_JJLL01000108.1 Protein Homology CDS 32011 34032 . + 0 ID=cds-WP_000042533.1;Parent=gene-AD11_RS07160;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AD11_RS07160;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 34224 35132 . - . ID=gene-AD11_RS07165;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AD11_RS07165;old_locus_tag=AD11_0858 NZ_JJLL01000108.1 Protein Homology CDS 34224 35132 . - 0 ID=cds-WP_001295302.1;Parent=gene-AD11_RS07165;Dbxref=GenBank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AD11_RS07165;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11 NZ_JJLL01000108.1 cmsearch riboswitch 35397 35541 . + . ID=id-NZ_JJLL01000108.1:35397..35541;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLL01000108.1 RefSeq gene 35529 36518 . + . ID=gene-AD11_RS07175;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AD11_RS07175;old_locus_tag=AD11_0859 NZ_JJLL01000108.1 Protein Homology CDS 35529 36518 . + 0 ID=cds-WP_001340186.1;Parent=gene-AD11_RS07175;Dbxref=GenBank:WP_001340186.1;Name=WP_001340186.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AD11_RS07175;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001340186.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 36540 37052 . + . ID=gene-AD11_RS07180;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AD11_RS07180;old_locus_tag=AD11_0860 NZ_JJLL01000108.1 Protein Homology CDS 36540 37052 . + 0 ID=cds-WP_000084639.1;Parent=gene-AD11_RS07180;Dbxref=GenBank:WP_000084639.1;Name=WP_000084639.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AD11_RS07180;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 37055 37540 . + . ID=gene-AD11_RS07185;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AD11_RS07185;old_locus_tag=AD11_0861 NZ_JJLL01000108.1 Protein Homology CDS 37055 37540 . + 0 ID=cds-WP_000080885.1;Parent=gene-AD11_RS07185;Dbxref=GenBank:WP_000080885.1;Name=WP_000080885.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AD11_RS07185;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 37533 37778 . + . ID=gene-AD11_RS07190;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AD11_RS07190;old_locus_tag=AD11_0862 NZ_JJLL01000108.1 Protein Homology CDS 37533 37778 . + 0 ID=cds-WP_000598619.1;Parent=gene-AD11_RS07190;Dbxref=GenBank:WP_000598619.1;Name=WP_000598619.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AD11_RS07190;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 37780 38232 . + . ID=gene-AD11_RS07195;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AD11_RS07195;old_locus_tag=AD11_0863 NZ_JJLL01000108.1 Protein Homology CDS 37780 38232 . + 0 ID=cds-WP_000852296.1;Parent=gene-AD11_RS07195;Dbxref=GenBank:WP_000852296.1;Name=WP_000852296.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AD11_RS07195;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852296.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 38369 39073 . + . ID=gene-AD11_RS07200;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AD11_RS07200;old_locus_tag=AD11_0864 NZ_JJLL01000108.1 Protein Homology CDS 38369 39073 . + 0 ID=cds-WP_000373624.1;Parent=gene-AD11_RS07200;Dbxref=GenBank:WP_000373624.1;Name=WP_000373624.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AD11_RS07200;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000373624.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 39278 39991 . + . ID=gene-AD11_RS07205;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AD11_RS07205;old_locus_tag=AD11_0865 NZ_JJLL01000108.1 Protein Homology CDS 39278 39991 . + 0 ID=cds-WP_000446917.1;Parent=gene-AD11_RS07205;Dbxref=GenBank:WP_000446917.1;Name=WP_000446917.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AD11_RS07205;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000446917.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 40027 40983 . - . ID=gene-AD11_RS07210;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AD11_RS07210;old_locus_tag=AD11_0866 NZ_JJLL01000108.1 Protein Homology CDS 40027 40983 . - 0 ID=cds-WP_000045450.1;Parent=gene-AD11_RS07210;Dbxref=GenBank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AD11_RS07210;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045450.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 40983 42224 . - . ID=gene-AD11_RS07215;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AD11_RS07215;old_locus_tag=AD11_0867 NZ_JJLL01000108.1 Protein Homology CDS 40983 42224 . - 0 ID=cds-WP_000650337.1;Parent=gene-AD11_RS07215;Dbxref=GenBank:WP_000650337.1;Name=WP_000650337.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AD11_RS07215;product=cardiolipin synthase ClsB;protein_id=WP_000650337.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 42221 42982 . - . ID=gene-AD11_RS07220;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AD11_RS07220;old_locus_tag=AD11_0868 NZ_JJLL01000108.1 Protein Homology CDS 42221 42982 . - 0 ID=cds-WP_032084033.1;Parent=gene-AD11_RS07220;Dbxref=GenBank:WP_032084033.1;Name=WP_032084033.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AD11_RS07220;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_032084033.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 43115 43525 . + . ID=gene-AD11_RS07225;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AD11_RS07225;old_locus_tag=AD11_0869 NZ_JJLL01000108.1 Protein Homology CDS 43115 43525 . + 0 ID=cds-WP_000871982.1;Parent=gene-AD11_RS07225;Dbxref=GenBank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AD11_RS07225;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 43487 44593 . - . ID=gene-AD11_RS07230;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AD11_RS07230;old_locus_tag=AD11_0870 NZ_JJLL01000108.1 Protein Homology CDS 43487 44593 . - 0 ID=cds-WP_000469031.1;Parent=gene-AD11_RS07230;Dbxref=GenBank:WP_000469031.1;Name=WP_000469031.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AD11_RS07230;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 44604 45737 . - . ID=gene-AD11_RS07235;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AD11_RS07235;old_locus_tag=AD11_0871 NZ_JJLL01000108.1 Protein Homology CDS 44604 45737 . - 0 ID=cds-WP_000070131.1;Parent=gene-AD11_RS07235;Dbxref=GenBank:WP_000070131.1;Name=WP_000070131.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AD11_RS07235;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 45730 47466 . - . ID=gene-AD11_RS07240;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AD11_RS07240;old_locus_tag=AD11_0872 NZ_JJLL01000108.1 Protein Homology CDS 45730 47466 . - 0 ID=cds-WP_033866325.1;Parent=gene-AD11_RS07240;Dbxref=GenBank:WP_033866325.1;Name=WP_033866325.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415315.4;locus_tag=AD11_RS07240;product=ATP-binding cassette domain-containing protein;protein_id=WP_033866325.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 47459 48454 . - . ID=gene-AD11_RS07245;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AD11_RS07245;old_locus_tag=AD11_0873 NZ_JJLL01000108.1 Protein Homology CDS 47459 48454 . - 0 ID=cds-WP_000743444.1;Parent=gene-AD11_RS07245;Dbxref=GenBank:WP_000743444.1;Name=WP_000743444.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AD11_RS07245;product=secretion protein HlyD;protein_id=WP_000743444.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 48457 49128 . - . ID=gene-AD11_RS07250;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AD11_RS07250;old_locus_tag=AD11_0874 NZ_JJLL01000108.1 Protein Homology CDS 48457 49128 . - 0 ID=cds-WP_001296991.1;Parent=gene-AD11_RS07250;Dbxref=GenBank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AD11_RS07250;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 49357 50721 . + . ID=gene-AD11_RS07255;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AD11_RS07255;old_locus_tag=AD11_0875 NZ_JJLL01000108.1 Protein Homology CDS 49357 50721 . + 0 ID=cds-WP_000007101.1;Parent=gene-AD11_RS07255;Dbxref=GenBank:WP_000007101.1;Name=WP_000007101.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AD11_RS07255;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 50953 51435 . - . ID=gene-AD11_RS07260;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AD11_RS07260;old_locus_tag=AD11_0876 NZ_JJLL01000108.1 Protein Homology CDS 50953 51435 . - 0 ID=cds-WP_001145126.1;Parent=gene-AD11_RS07260;Dbxref=GenBank:WP_001145126.1;Name=WP_001145126.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AD11_RS07260;product=N-glycosidase YbiA;protein_id=WP_001145126.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 51555 53705 . + . ID=gene-AD11_RS07265;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AD11_RS07265;old_locus_tag=AD11_0877 NZ_JJLL01000108.1 Protein Homology CDS 51555 53705 . + 0 ID=cds-WP_001340191.1;Parent=gene-AD11_RS07265;Dbxref=GenBank:WP_001340191.1;Name=WP_001340191.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AD11_RS07265;product=ATP-dependent DNA helicase DinG;protein_id=WP_001340191.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 53733 54695 . + . ID=gene-AD11_RS07270;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AD11_RS07270;old_locus_tag=AD11_0878 NZ_JJLL01000108.1 Protein Homology CDS 53733 54695 . + 0 ID=cds-WP_000386551.1;Parent=gene-AD11_RS07270;Dbxref=GenBank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AD11_RS07270;product=DNA-binding protein YbiB;protein_id=WP_000386551.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 54836 55921 . + . ID=gene-AD11_RS07275;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AD11_RS07275;old_locus_tag=AD11_0879 NZ_JJLL01000108.1 Protein Homology CDS 54836 55921 . + 0 ID=cds-WP_000443530.1;Parent=gene-AD11_RS07275;Dbxref=GenBank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AD11_RS07275;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 55988 56047 . + . ID=gene-AD11_RS32475;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AD11_RS32475 NZ_JJLL01000108.1 Protein Homology CDS 55988 56047 . + 0 ID=cds-WP_211180490.1;Parent=gene-AD11_RS32475;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AD11_RS32475;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 56150 56410 . - . ID=gene-AD11_RS07280;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AD11_RS07280;old_locus_tag=AD11_0880 NZ_JJLL01000108.1 Protein Homology CDS 56150 56410 . - 0 ID=cds-WP_000849301.1;Parent=gene-AD11_RS07280;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AD11_RS07280;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 56675 56941 . - . ID=gene-AD11_RS07285;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AD11_RS07285;old_locus_tag=AD11_0881 NZ_JJLL01000108.1 Protein Homology CDS 56675 56941 . - 0 ID=cds-WP_000146343.1;Parent=gene-AD11_RS07285;Dbxref=GenBank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AD11_RS07285;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 57015 57692 . - . ID=gene-AD11_RS07290;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AD11_RS07290;old_locus_tag=AD11_0882 NZ_JJLL01000108.1 Protein Homology CDS 57015 57692 . - 0 ID=cds-WP_000990177.1;Parent=gene-AD11_RS07290;Dbxref=GenBank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AD11_RS07290;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 57734 60016 . - . ID=gene-AD11_RS07295;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=AD11_RS07295;old_locus_tag=AD11_0883 NZ_JJLL01000108.1 Protein Homology CDS 57734 60016 . - 0 ID=cds-WP_000430057.1;Parent=gene-AD11_RS07295;Dbxref=GenBank:WP_000430057.1;Name=WP_000430057.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AD11_RS07295;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 60281 60541 . - . ID=gene-AD11_RS31450;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AD11_RS31450;old_locus_tag=AD11_0884 NZ_JJLL01000108.1 Protein Homology CDS 60281 60541 . - 0 ID=cds-WP_000710619.1;Parent=gene-AD11_RS31450;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AD11_RS31450;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 60817 61743 . + . ID=gene-AD11_RS07305;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AD11_RS07305;old_locus_tag=AD11_0885 NZ_JJLL01000108.1 Protein Homology CDS 60817 61743 . + 0 ID=cds-WP_001295299.1;Parent=gene-AD11_RS07305;Dbxref=GenBank:WP_001295299.1;Name=WP_001295299.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AD11_RS07305;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001295299.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 61740 63965 . - . ID=gene-AD11_RS07310;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AD11_RS07310;old_locus_tag=AD11_0886 NZ_JJLL01000108.1 Protein Homology CDS 61740 63965 . - 0 ID=cds-WP_001267253.1;Parent=gene-AD11_RS07310;Dbxref=GenBank:WP_001267253.1;Name=WP_001267253.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AD11_RS07310;product=mechanosensitive channel protein;protein_id=WP_001267253.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 64226 64948 . - . ID=gene-AD11_RS07315;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AD11_RS07315;old_locus_tag=AD11_0887 NZ_JJLL01000108.1 Protein Homology CDS 64226 64948 . - 0 ID=cds-WP_000569083.1;Parent=gene-AD11_RS07315;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AD11_RS07315;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 64945 65604 . - . ID=gene-AD11_RS07320;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AD11_RS07320;old_locus_tag=AD11_0888 NZ_JJLL01000108.1 Protein Homology CDS 64945 65604 . - 0 ID=cds-WP_001159065.1;Parent=gene-AD11_RS07320;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AD11_RS07320;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 65743 66489 . - . ID=gene-AD11_RS07325;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AD11_RS07325;old_locus_tag=AD11_0889 NZ_JJLL01000108.1 Protein Homology CDS 65743 66489 . - 0 ID=cds-WP_000843866.1;Parent=gene-AD11_RS07325;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AD11_RS07325;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 66893 67396 . - . ID=gene-AD11_RS07335;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AD11_RS07335;old_locus_tag=AD11_0890 NZ_JJLL01000108.1 Protein Homology CDS 66893 67396 . - 0 ID=cds-WP_000100800.1;Parent=gene-AD11_RS07335;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AD11_RS07335;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 67695 68582 . - . ID=gene-AD11_RS07340;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AD11_RS07340;old_locus_tag=AD11_0891 NZ_JJLL01000108.1 Protein Homology CDS 67695 68582 . - 0 ID=cds-WP_001295297.1;Parent=gene-AD11_RS07340;Dbxref=GenBank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AD11_RS07340;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 68817 68882 . + . ID=gene-AD11_RS31455;Name=AD11_RS31455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31455 NZ_JJLL01000108.1 Protein Homology CDS 68817 68882 . + 0 ID=cds-WP_120795379.1;Parent=gene-AD11_RS31455;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AD11_RS31455;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 68935 69450 . + . ID=gene-AD11_RS07345;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AD11_RS07345;old_locus_tag=AD11_0892 NZ_JJLL01000108.1 Protein Homology CDS 68935 69450 . + 0 ID=cds-WP_001295296.1;Parent=gene-AD11_RS07345;Dbxref=GenBank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AD11_RS07345;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 69499 71082 . - . ID=gene-AD11_RS07350;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AD11_RS07350;old_locus_tag=AD11_0893 NZ_JJLL01000108.1 Protein Homology CDS 69499 71082 . - 0 ID=cds-WP_001054678.1;Parent=gene-AD11_RS07350;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AD11_RS07350;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 71354 71482 . - . ID=gene-AD11_RS07355;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AD11_RS07355;old_locus_tag=AD11_0894 NZ_JJLL01000108.1 Protein Homology CDS 71354 71482 . - 0 ID=cds-WP_001001761.1;Parent=gene-AD11_RS07355;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AD11_RS07355;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 71668 72135 . + . ID=gene-AD11_RS07360;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AD11_RS07360;old_locus_tag=AD11_0895 NZ_JJLL01000108.1 Protein Homology CDS 71668 72135 . + 0 ID=cds-WP_000091016.1;Parent=gene-AD11_RS07360;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AD11_RS07360;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 72132 73250 . + . ID=gene-AD11_RS07365;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AD11_RS07365;old_locus_tag=AD11_0896 NZ_JJLL01000108.1 Protein Homology CDS 72132 73250 . + 0 ID=cds-WP_000056442.1;Parent=gene-AD11_RS07365;Dbxref=GenBank:WP_000056442.1;Name=WP_000056442.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AD11_RS07365;product=anion transporter;protein_id=WP_000056442.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 73309 74229 . - . ID=gene-AD11_RS07370;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AD11_RS07370;old_locus_tag=AD11_0897 NZ_JJLL01000108.1 Protein Homology CDS 73309 74229 . - 0 ID=cds-WP_001056384.1;Parent=gene-AD11_RS07370;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AD11_RS07370;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 74448 76040 . + . ID=gene-AD11_RS07375;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AD11_RS07375;old_locus_tag=AD11_0898 NZ_JJLL01000108.1 Protein Homology CDS 74448 76040 . + 0 ID=cds-WP_000961458.1;Parent=gene-AD11_RS07375;Dbxref=GenBank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AD11_RS07375;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 76281 77546 . - . ID=gene-AD11_RS07380;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AD11_RS07380;old_locus_tag=AD11_0899 NZ_JJLL01000108.1 Protein Homology CDS 76281 77546 . - 0 ID=cds-WP_000168797.1;Parent=gene-AD11_RS07380;Dbxref=GenBank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AD11_RS07380;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 77698 78513 . - . ID=gene-AD11_RS07385;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AD11_RS07385;old_locus_tag=AD11_0900 NZ_JJLL01000108.1 Protein Homology CDS 77698 78513 . - 0 ID=cds-WP_001741459.1;Parent=gene-AD11_RS07385;Dbxref=GenBank:WP_001741459.1;Name=WP_001741459.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308926.1;locus_tag=AD11_RS07385;product=sugar-phosphatase YbiV;protein_id=WP_001741459.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 78659 81091 . - . ID=gene-AD11_RS07390;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AD11_RS07390;old_locus_tag=AD11_0901 NZ_JJLL01000108.1 Protein Homology CDS 78659 81091 . - 0 ID=cds-WP_032083417.1;Parent=gene-AD11_RS07390;Dbxref=GenBank:WP_032083417.1;Name=WP_032083417.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AD11_RS07390;product=glycyl radical protein;protein_id=WP_032083417.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 81097 81996 . - . ID=gene-AD11_RS07395;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AD11_RS07395;old_locus_tag=AD11_0902 NZ_JJLL01000108.1 Protein Homology CDS 81097 81996 . - 0 ID=cds-WP_001338400.1;Parent=gene-AD11_RS07395;Dbxref=GenBank:WP_001338400.1;Name=WP_001338400.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AD11_RS07395;product=glycyl-radical enzyme activating protein;protein_id=WP_001338400.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 82127 82789 . + . ID=gene-AD11_RS07400;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AD11_RS07400;old_locus_tag=AD11_0903 NZ_JJLL01000108.1 Protein Homology CDS 82127 82789 . + 0 ID=cds-WP_001752341.1;Parent=gene-AD11_RS07400;Dbxref=GenBank:WP_001752341.1;Name=WP_001752341.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AD11_RS07400;product=fructose-6-phosphate aldolase;protein_id=WP_001752341.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 82865 83614 . - . ID=gene-AD11_RS07405;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AD11_RS07405;old_locus_tag=AD11_0904 NZ_JJLL01000108.1 Protein Homology CDS 82865 83614 . - 0 ID=cds-WP_033865306.1;Parent=gene-AD11_RS07405;Dbxref=GenBank:WP_033865306.1;Name=WP_033865306.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415347.1;locus_tag=AD11_RS07405;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_033865306.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 83614 84849 . - . ID=gene-AD11_RS07410;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AD11_RS07410;old_locus_tag=AD11_0905 NZ_JJLL01000108.1 Protein Homology CDS 83614 84849 . - 0 ID=cds-WP_033865308.1;Parent=gene-AD11_RS07410;Dbxref=GenBank:WP_033865308.1;Name=WP_033865308.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=AD11_RS07410;product=molybdopterin molybdotransferase MoeA;protein_id=WP_033865308.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 85053 86018 . + . ID=gene-AD11_RS07415;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AD11_RS07415;old_locus_tag=AD11_0906 NZ_JJLL01000108.1 Protein Homology CDS 85053 86018 . + 0 ID=cds-WP_000513775.1;Parent=gene-AD11_RS07415;Dbxref=GenBank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AD11_RS07415;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 86005 87876 . + . ID=gene-AD11_RS07420;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AD11_RS07420;old_locus_tag=AD11_0907 NZ_JJLL01000108.1 Protein Homology CDS 86005 87876 . + 0 ID=cds-WP_033865309.1;Parent=gene-AD11_RS07420;Dbxref=GenBank:WP_033865309.1;Name=WP_033865309.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AD11_RS07420;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_033865309.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 87896 89434 . + . ID=gene-AD11_RS07425;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AD11_RS07425;old_locus_tag=AD11_0908 NZ_JJLL01000108.1 Protein Homology CDS 87896 89434 . + 0 ID=cds-WP_000090140.1;Parent=gene-AD11_RS07425;Dbxref=GenBank:WP_000090140.1;Name=WP_000090140.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415351.1;locus_tag=AD11_RS07425;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_000090140.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 89452 90372 . + . ID=gene-AD11_RS07430;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AD11_RS07430;old_locus_tag=AD11_0909 NZ_JJLL01000108.1 Protein Homology CDS 89452 90372 . + 0 ID=cds-WP_000936043.1;Parent=gene-AD11_RS07430;Dbxref=GenBank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AD11_RS07430;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 90375 91286 . + . ID=gene-AD11_RS07435;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AD11_RS07435;old_locus_tag=AD11_0910 NZ_JJLL01000108.1 Protein Homology CDS 90375 91286 . + 0 ID=cds-WP_001236051.1;Parent=gene-AD11_RS07435;Dbxref=GenBank:WP_001236051.1;Name=WP_001236051.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415353.1;locus_tag=AD11_RS07435;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236051.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 91464 93812 . + . ID=gene-AD11_RS07440;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AD11_RS07440;old_locus_tag=AD11_0911 NZ_JJLL01000108.1 Protein Homology CDS 91464 93812 . + 0 ID=cds-WP_033865338.1;Parent=gene-AD11_RS07440;Dbxref=GenBank:WP_033865338.1;Name=WP_033865338.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AD11_RS07440;product=sensor domain-containing phosphodiesterase;protein_id=WP_033865338.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 93820 95148 . + . ID=gene-AD11_RS07445;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AD11_RS07445;old_locus_tag=AD11_0912 NZ_JJLL01000108.1 Protein Homology CDS 93820 95148 . + 0 ID=cds-WP_000086904.1;Parent=gene-AD11_RS07445;Dbxref=GenBank:WP_000086904.1;Name=WP_000086904.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415355.1;locus_tag=AD11_RS07445;product=GGDEF domain-containing protein;protein_id=WP_000086904.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 95195 96520 . - . ID=gene-AD11_RS07450;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AD11_RS07450;old_locus_tag=AD11_0913 NZ_JJLL01000108.1 Protein Homology CDS 95195 96520 . - 0 ID=cds-WP_000049367.1;Parent=gene-AD11_RS07450;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AD11_RS07450;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 96733 97116 . + . ID=gene-AD11_RS07455;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AD11_RS07455;old_locus_tag=AD11_0914 NZ_JJLL01000108.1 Protein Homology CDS 96733 97116 . + 0 ID=cds-WP_000497137.1;Parent=gene-AD11_RS07455;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AD11_RS07455;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 97227 98342 . + . ID=gene-AD11_RS07460;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AD11_RS07460;old_locus_tag=AD11_0915 NZ_JJLL01000108.1 Protein Homology CDS 97227 98342 . + 0 ID=cds-WP_000555031.1;Parent=gene-AD11_RS07460;Dbxref=GenBank:WP_000555031.1;Name=WP_000555031.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415358.1;locus_tag=AD11_RS07460;product=aldose sugar dehydrogenase YliI;protein_id=WP_000555031.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 98339 98965 . - . ID=gene-AD11_RS07465;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AD11_RS07465;old_locus_tag=AD11_0916 NZ_JJLL01000108.1 Protein Homology CDS 98339 98965 . - 0 ID=cds-WP_001295292.1;Parent=gene-AD11_RS07465;Dbxref=GenBank:WP_001295292.1;Name=WP_001295292.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AD11_RS07465;product=glutathione S-transferase GstB;protein_id=WP_001295292.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 99212 100414 . + . ID=gene-AD11_RS07470;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AD11_RS07470;old_locus_tag=AD11_0917 NZ_JJLL01000108.1 Protein Homology CDS 99212 100414 . + 0 ID=cds-WP_033865340.1;Parent=gene-AD11_RS07470;Dbxref=GenBank:WP_033865340.1;Name=WP_033865340.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415360.1;locus_tag=AD11_RS07470;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_033865340.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 100461 101219 . - . ID=gene-AD11_RS07475;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AD11_RS07475;old_locus_tag=AD11_0918 NZ_JJLL01000108.1 Protein Homology CDS 100461 101219 . - 0 ID=cds-WP_000450121.1;Parent=gene-AD11_RS07475;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AD11_RS07475;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 101277 101873 . - . ID=gene-AD11_RS07480;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AD11_RS07480;old_locus_tag=AD11_0919 NZ_JJLL01000108.1 Protein Homology CDS 101277 101873 . - 0 ID=cds-WP_001295291.1;Parent=gene-AD11_RS07480;Dbxref=GenBank:WP_001295291.1;Name=WP_001295291.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415362.1;locus_tag=AD11_RS07480;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001295291.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 102158 103390 . + . ID=gene-AD11_RS07485;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AD11_RS07485;old_locus_tag=AD11_0920 NZ_JJLL01000108.1 Protein Homology CDS 102158 103390 . + 0 ID=cds-WP_001180089.1;Parent=gene-AD11_RS07485;Dbxref=GenBank:WP_001180089.1;Name=WP_001180089.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AD11_RS07485;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180089.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 103431 103715 . - . ID=gene-AD11_RS07490;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AD11_RS07490;old_locus_tag=AD11_0921 NZ_JJLL01000108.1 Protein Homology CDS 103431 103715 . - 0 ID=cds-WP_000605480.1;Parent=gene-AD11_RS07490;Dbxref=GenBank:WP_000605480.1;Name=WP_000605480.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AD11_RS07490;product=protein YbjH;protein_id=WP_000605480.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 103801 104616 . - . ID=gene-AD11_RS07495;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AD11_RS07495;old_locus_tag=AD11_0922 NZ_JJLL01000108.1 Protein Homology CDS 103801 104616 . - 0 ID=cds-WP_033865310.1;Parent=gene-AD11_RS07495;Dbxref=GenBank:WP_033865310.1;Name=WP_033865310.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AD11_RS07495;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_033865310.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 104616 105824 . - . ID=gene-AD11_RS07500;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AD11_RS07500;old_locus_tag=AD11_0923 NZ_JJLL01000108.1 Protein Homology CDS 104616 105824 . - 0 ID=cds-WP_000217859.1;Parent=gene-AD11_RS07500;Dbxref=GenBank:WP_000217859.1;Name=WP_000217859.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AD11_RS07500;product=MFS transporter;protein_id=WP_000217859.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 105908 106444 . + . ID=gene-AD11_RS07505;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AD11_RS07505;old_locus_tag=AD11_0924 NZ_JJLL01000108.1 Protein Homology CDS 105908 106444 . + 0 ID=cds-WP_001295289.1;Parent=gene-AD11_RS07505;Dbxref=GenBank:WP_001295289.1;Name=WP_001295289.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415367.1;locus_tag=AD11_RS07505;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001295289.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 106619 108304 . - . ID=gene-AD11_RS07510;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AD11_RS07510;old_locus_tag=AD11_0925 NZ_JJLL01000108.1 Protein Homology CDS 106619 108304 . - 0 ID=cds-WP_001024876.1;Parent=gene-AD11_RS07510;Dbxref=GenBank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AD11_RS07510;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 108574 108951 . + . ID=gene-AD11_RS07515;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AD11_RS07515;old_locus_tag=AD11_0926 NZ_JJLL01000108.1 Protein Homology CDS 108574 108951 . + 0 ID=cds-WP_000681108.1;Parent=gene-AD11_RS07515;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AD11_RS07515;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 108981 109238 . - . ID=gene-AD11_RS07520;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AD11_RS07520;old_locus_tag=AD11_0927 NZ_JJLL01000108.1 Protein Homology CDS 108981 109238 . - 0 ID=cds-WP_001195240.1;Parent=gene-AD11_RS07520;Dbxref=GenBank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=AD11_RS07520;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 109398 109685 . + . ID=gene-AD11_RS07525;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AD11_RS07525;old_locus_tag=AD11_0928 NZ_JJLL01000108.1 Protein Homology CDS 109398 109685 . + 0 ID=cds-WP_001201560.1;Parent=gene-AD11_RS07525;Dbxref=GenBank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AD11_RS07525;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 109669 110391 . + . ID=gene-AD11_RS07530;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=AD11_RS07530;old_locus_tag=AD11_0929 NZ_JJLL01000108.1 Protein Homology CDS 109669 110391 . + 0 ID=cds-WP_000189159.1;Parent=gene-AD11_RS07530;Dbxref=GenBank:WP_000189159.1;Name=WP_000189159.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=AD11_RS07530;product=nitroreductase NfsA;protein_id=WP_000189159.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 110452 111354 . + . ID=gene-AD11_RS07535;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AD11_RS07535;old_locus_tag=AD11_0930 NZ_JJLL01000108.1 Protein Homology CDS 110452 111354 . + 0 ID=cds-WP_000684321.1;Parent=gene-AD11_RS07535;Dbxref=GenBank:WP_000684321.1;Name=WP_000684321.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AD11_RS07535;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 111442 111918 . + . ID=gene-AD11_RS07540;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AD11_RS07540;old_locus_tag=AD11_0931 NZ_JJLL01000108.1 Protein Homology CDS 111442 111918 . + 0 ID=cds-WP_000203025.1;Parent=gene-AD11_RS07540;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AD11_RS07540;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 112269 113381 . + . ID=gene-AD11_RS07550;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AD11_RS07550;old_locus_tag=AD11_0933 NZ_JJLL01000108.1 Protein Homology CDS 112269 113381 . + 0 ID=cds-WP_000126073.1;Parent=gene-AD11_RS07550;Dbxref=GenBank:WP_000126073.1;Name=WP_000126073.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AD11_RS07550;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126073.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 113476 114609 . + . ID=gene-AD11_RS07555;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AD11_RS07555;old_locus_tag=AD11_0934 NZ_JJLL01000108.1 Protein Homology CDS 113476 114609 . + 0 ID=cds-WP_000996005.1;Parent=gene-AD11_RS07555;Dbxref=GenBank:WP_000996005.1;Name=WP_000996005.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AD11_RS07555;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000996005.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 114619 115572 . + . ID=gene-AD11_RS07560;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AD11_RS07560;old_locus_tag=AD11_0935 NZ_JJLL01000108.1 Protein Homology CDS 114619 115572 . + 0 ID=cds-WP_001093854.1;Parent=gene-AD11_RS07560;Dbxref=GenBank:WP_001093854.1;Name=WP_001093854.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706736.1;locus_tag=AD11_RS07560;product=putrescine ABC transporter permease PotH;protein_id=WP_001093854.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 115569 116414 . + . ID=gene-AD11_RS07565;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AD11_RS07565;old_locus_tag=AD11_0936 NZ_JJLL01000108.1 Protein Homology CDS 115569 116414 . + 0 ID=cds-WP_001061665.1;Parent=gene-AD11_RS07565;Dbxref=GenBank:WP_001061665.1;Name=WP_001061665.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AD11_RS07565;product=putrescine ABC transporter permease PotI;protein_id=WP_001061665.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 116474 116962 . + . ID=gene-AD11_RS07570;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AD11_RS07570;old_locus_tag=AD11_0937 NZ_JJLL01000108.1 Protein Homology CDS 116474 116962 . + 0 ID=cds-WP_000389260.1;Parent=gene-AD11_RS07570;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AD11_RS07570;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 117003 118130 . + . ID=gene-AD11_RS07575;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AD11_RS07575;old_locus_tag=AD11_0938 NZ_JJLL01000108.1 Protein Homology CDS 117003 118130 . + 0 ID=cds-WP_001149756.1;Parent=gene-AD11_RS07575;Dbxref=GenBank:WP_001149756.1;Name=WP_001149756.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415380.1;locus_tag=AD11_RS07575;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_001149756.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 118329 119060 . - . ID=gene-AD11_RS07580;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AD11_RS07580;old_locus_tag=AD11_0939 NZ_JJLL01000108.1 Protein Homology CDS 118329 119060 . - 0 ID=cds-WP_001295339.1;Parent=gene-AD11_RS07580;Dbxref=GenBank:WP_001295339.1;Name=WP_001295339.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AD11_RS07580;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295339.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 119351 120019 . - . ID=gene-AD11_RS07585;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AD11_RS07585;old_locus_tag=AD11_0940 NZ_JJLL01000108.1 Protein Homology CDS 119351 120019 . - 0 ID=cds-WP_000464491.1;Parent=gene-AD11_RS07585;Dbxref=GenBank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AD11_RS07585;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 120019 120735 . - . ID=gene-AD11_RS07590;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AD11_RS07590;old_locus_tag=AD11_0941 NZ_JJLL01000108.1 Protein Homology CDS 120019 120735 . - 0 ID=cds-WP_001001691.1;Parent=gene-AD11_RS07590;Dbxref=GenBank:WP_001001691.1;Name=WP_001001691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AD11_RS07590;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 120742 121473 . - . ID=gene-AD11_RS07595;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AD11_RS07595;old_locus_tag=AD11_0942 NZ_JJLL01000108.1 Protein Homology CDS 120742 121473 . - 0 ID=cds-WP_000756569.1;Parent=gene-AD11_RS07595;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AD11_RS07595;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 121491 122219 . - . ID=gene-AD11_RS07600;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AD11_RS07600;old_locus_tag=AD11_0943 NZ_JJLL01000108.1 Protein Homology CDS 121491 122219 . - 0 ID=cds-WP_000027205.1;Parent=gene-AD11_RS07600;Dbxref=GenBank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AD11_RS07600;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 122437 122952 . - . ID=gene-AD11_RS07605;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AD11_RS07605;old_locus_tag=AD11_0944 NZ_JJLL01000108.1 Protein Homology CDS 122437 122952 . - 0 ID=cds-WP_001270734.1;Parent=gene-AD11_RS07605;Dbxref=GenBank:WP_001270734.1;Name=WP_001270734.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AD11_RS07605;product=lipoprotein;protein_id=WP_001270734.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 123078 123401 . + . ID=gene-AD11_RS07610;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AD11_RS07610;old_locus_tag=AD11_0945 NZ_JJLL01000108.1 Protein Homology CDS 123078 123401 . + 0 ID=cds-WP_001160737.1;Parent=gene-AD11_RS07610;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AD11_RS07610;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 123398 124228 . + . ID=gene-AD11_RS07615;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AD11_RS07615;old_locus_tag=AD11_0946 NZ_JJLL01000108.1 Protein Homology CDS 123398 124228 . + 0 ID=cds-WP_001252135.1;Parent=gene-AD11_RS07615;Dbxref=GenBank:WP_001252135.1;Name=WP_001252135.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AD11_RS07615;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001252135.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 124225 125238 . - . ID=gene-AD11_RS07620;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AD11_RS07620;old_locus_tag=AD11_0947 NZ_JJLL01000108.1 Protein Homology CDS 124225 125238 . - 0 ID=cds-WP_001338420.1;Parent=gene-AD11_RS07620;Dbxref=GenBank:WP_001338420.1;Name=WP_001338420.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AD11_RS07620;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001338420.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 125337 126767 . - . ID=gene-AD11_RS07625;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AD11_RS07625;old_locus_tag=AD11_0948 NZ_JJLL01000108.1 Protein Homology CDS 125337 126767 . - 0 ID=cds-WP_001136554.1;Parent=gene-AD11_RS07625;Dbxref=GenBank:WP_001136554.1;Name=WP_001136554.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AD11_RS07625;product=SDR family oxidoreductase;protein_id=WP_001136554.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 126778 127779 . - . ID=gene-AD11_RS07630;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AD11_RS07630;old_locus_tag=AD11_0949 NZ_JJLL01000108.1 Protein Homology CDS 126778 127779 . - 0 ID=cds-WP_000566376.1;Parent=gene-AD11_RS07630;Dbxref=GenBank:WP_000566376.1;Name=WP_000566376.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415391.1;locus_tag=AD11_RS07630;product=low-specificity L-threonine aldolase;protein_id=WP_000566376.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 127816 129534 . - . ID=gene-AD11_RS07635;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AD11_RS07635;old_locus_tag=AD11_0950 NZ_JJLL01000108.1 Protein Homology CDS 127816 129534 . - 0 ID=cds-WP_000815337.1;Parent=gene-AD11_RS07635;Dbxref=GenBank:WP_000815337.1;Name=WP_000815337.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=AD11_RS07635;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815337.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 129667 130635 . - . ID=gene-AD11_RS07640;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AD11_RS07640;old_locus_tag=AD11_0951 NZ_JJLL01000108.1 Protein Homology CDS 129667 130635 . - 0 ID=cds-WP_000178677.1;Parent=gene-AD11_RS07640;Dbxref=GenBank:WP_000178677.1;Name=WP_000178677.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415393.1;locus_tag=AD11_RS07640;product=NADH oxidoreductase;protein_id=WP_000178677.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 130647 132299 . - . ID=gene-AD11_RS07645;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AD11_RS07645;old_locus_tag=AD11_0952 NZ_JJLL01000108.1 Protein Homology CDS 130647 132299 . - 0 ID=cds-WP_033865311.1;Parent=gene-AD11_RS07645;Dbxref=GenBank:WP_033865311.1;Name=WP_033865311.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AD11_RS07645;product=hydroxylamine reductase;protein_id=WP_033865311.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 132443 133342 . - . ID=gene-AD11_RS07650;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AD11_RS07650;old_locus_tag=AD11_0953 NZ_JJLL01000108.1 Protein Homology CDS 132443 133342 . - 0 ID=cds-WP_000491142.1;Parent=gene-AD11_RS07650;Dbxref=GenBank:WP_000491142.1;Name=WP_000491142.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415395.2;locus_tag=AD11_RS07650;product=L-lysine exporter LysO;protein_id=WP_000491142.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 133837 134532 . - . ID=gene-AD11_RS07655;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=AD11_RS07655;old_locus_tag=AD11_0954 NZ_JJLL01000108.1 Protein Homology CDS 133837 134532 . - 0 ID=cds-WP_001298299.1;Parent=gene-AD11_RS07655;Dbxref=GenBank:WP_001298299.1;Name=WP_001298299.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AD11_RS07655;product=aquaporin Z;protein_id=WP_001298299.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 134958 136616 . + . ID=gene-AD11_RS07665;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AD11_RS07665;old_locus_tag=AD11_0955 NZ_JJLL01000108.1 Protein Homology CDS 134958 136616 . + 0 ID=cds-WP_000599802.1;Parent=gene-AD11_RS07665;Dbxref=GenBank:WP_000599802.1;Name=WP_000599802.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415397.1;locus_tag=AD11_RS07665;product=ATP-dependent endonuclease;protein_id=WP_000599802.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 136613 137569 . - . ID=gene-AD11_RS07670;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AD11_RS07670;old_locus_tag=AD11_0956 NZ_JJLL01000108.1 Protein Homology CDS 136613 137569 . - 0 ID=cds-WP_001380339.1;Parent=gene-AD11_RS07670;Dbxref=GenBank:WP_001380339.1;Name=WP_001380339.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AD11_RS07670;product=VirK/YbjX family protein;protein_id=WP_001380339.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 137720 138835 . + . ID=gene-AD11_RS07675;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AD11_RS07675;old_locus_tag=AD11_0957 NZ_JJLL01000108.1 Protein Homology CDS 137720 138835 . + 0 ID=cds-WP_000746443.1;Parent=gene-AD11_RS07675;Dbxref=GenBank:WP_000746443.1;Name=WP_000746443.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415399.4;locus_tag=AD11_RS07675;product=macrolide transporter subunit MacA;protein_id=WP_000746443.1;transl_table=11 NZ_JJLL01000108.1 RefSeq pseudogene 138832 140779 . + . ID=gene-AD11_RS07680;Name=macB;gbkey=Gene;gene=macB;gene_biotype=pseudogene;locus_tag=AD11_RS07680;old_locus_tag=AD11_0959;pseudo=true NZ_JJLL01000108.1 Protein Homology CDS 138832 140779 . + 0 ID=cds-AD11_RS07680;Parent=gene-AD11_RS07680;Note=frameshifted;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415400.1;locus_tag=AD11_RS07680;product=macrolide ABC transporter ATP-binding protein/permease MacB;pseudo=true;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 140852 141076 . - . ID=gene-AD11_RS07685;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AD11_RS07685;old_locus_tag=AD11_0960 NZ_JJLL01000108.1 Protein Homology CDS 140852 141076 . - 0 ID=cds-WP_000410785.1;Parent=gene-AD11_RS07685;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AD11_RS07685;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 141226 141300 . + . ID=gene-AD11_RS32480;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AD11_RS32480 NZ_JJLL01000108.1 Protein Homology CDS 141226 141300 . + 0 ID=cds-WP_001406719.1;Parent=gene-AD11_RS32480;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AD11_RS32480;product=protein YljB;protein_id=WP_001406719.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 141399 141719 . + . ID=gene-AD11_RS07690;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AD11_RS07690;old_locus_tag=AD11_0961 NZ_JJLL01000108.1 Protein Homology CDS 141399 141719 . + 0 ID=cds-WP_000520781.1;Parent=gene-AD11_RS07690;Dbxref=GenBank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AD11_RS07690;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 141750 144026 . + . ID=gene-AD11_RS07695;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AD11_RS07695;old_locus_tag=AD11_0962 NZ_JJLL01000108.1 Protein Homology CDS 141750 144026 . + 0 ID=cds-WP_000934040.1;Parent=gene-AD11_RS07695;Dbxref=GenBank:WP_000934040.1;Name=WP_000934040.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AD11_RS07695;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934040.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 144486 144573 . - . ID=gene-AD11_RS07700;Name=AD11_RS07700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS07700;old_locus_tag=AD11_0963 NZ_JJLL01000108.1 tRNAscan-SE tRNA 144486 144573 . - . ID=rna-AD11_RS07700;Parent=gene-AD11_RS07700;anticodon=(pos:complement(144537..144539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS07700;product=tRNA-Ser NZ_JJLL01000108.1 tRNAscan-SE exon 144486 144573 . - . ID=exon-AD11_RS07700-1;Parent=rna-AD11_RS07700;anticodon=(pos:complement(144537..144539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS07700;product=tRNA-Ser NZ_JJLL01000108.1 RefSeq gene 144827 145045 . - . ID=gene-AD11_RS07705;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AD11_RS07705;old_locus_tag=AD11_0964 NZ_JJLL01000108.1 Protein Homology CDS 144827 145045 . - 0 ID=cds-WP_001040187.1;Parent=gene-AD11_RS07705;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AD11_RS07705;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 145330 146034 . - . ID=gene-AD11_RS07710;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AD11_RS07710;old_locus_tag=AD11_0965 NZ_JJLL01000108.1 Protein Homology CDS 145330 146034 . - 0 ID=cds-WP_001241678.1;Parent=gene-AD11_RS07710;Dbxref=GenBank:WP_001241678.1;Name=WP_001241678.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AD11_RS07710;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 146076 147797 . - . ID=gene-AD11_RS07715;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AD11_RS07715;old_locus_tag=AD11_0966 NZ_JJLL01000108.1 Protein Homology CDS 146076 147797 . - 0 ID=cds-WP_001202189.1;Parent=gene-AD11_RS07715;Dbxref=GenBank:WP_001202189.1;Name=WP_001202189.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AD11_RS07715;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_001202189.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 147798 149564 . - . ID=gene-AD11_RS07720;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AD11_RS07720;old_locus_tag=AD11_0967 NZ_JJLL01000108.1 Protein Homology CDS 147798 149564 . - 0 ID=cds-WP_001043577.1;Parent=gene-AD11_RS07720;Dbxref=GenBank:WP_001043577.1;Name=WP_001043577.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706772.1;locus_tag=AD11_RS07720;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043577.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 149687 150652 . - . ID=gene-AD11_RS07725;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AD11_RS07725;old_locus_tag=AD11_0968 NZ_JJLL01000108.1 Protein Homology CDS 149687 150652 . - 0 ID=cds-WP_000537418.1;Parent=gene-AD11_RS07725;Dbxref=GenBank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AD11_RS07725;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 151197 151691 . + . ID=gene-AD11_RS07730;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AD11_RS07730;old_locus_tag=AD11_0970 NZ_JJLL01000108.1 Protein Homology CDS 151197 151691 . + 0 ID=cds-WP_000228473.1;Parent=gene-AD11_RS07730;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AD11_RS07730;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 151826 155815 . + . ID=gene-AD11_RS07735;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AD11_RS07735;old_locus_tag=AD11_0971 NZ_JJLL01000108.1 Protein Homology CDS 151826 155815 . + 0 ID=cds-WP_000077038.1;Parent=gene-AD11_RS07735;Dbxref=GenBank:WP_000077038.1;Name=WP_000077038.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AD11_RS07735;product=DNA translocase FtsK;protein_id=WP_000077038.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 155970 156581 . + . ID=gene-AD11_RS07740;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AD11_RS07740;old_locus_tag=AD11_0972 NZ_JJLL01000108.1 Protein Homology CDS 155970 156581 . + 0 ID=cds-WP_001295343.1;Parent=gene-AD11_RS07740;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AD11_RS07740;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 156592 157935 . + . ID=gene-AD11_RS07745;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AD11_RS07745;old_locus_tag=AD11_0973 NZ_JJLL01000108.1 Protein Homology CDS 156592 157935 . + 0 ID=cds-WP_000067755.1;Parent=gene-AD11_RS07745;Dbxref=GenBank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AD11_RS07745;product=replication-associated recombination protein RarA;protein_id=WP_000067755.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 158026 159318 . + . ID=gene-AD11_RS07750;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AD11_RS07750;old_locus_tag=AD11_0974 NZ_JJLL01000108.1 Protein Homology CDS 158026 159318 . + 0 ID=cds-WP_000886683.1;Parent=gene-AD11_RS07750;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AD11_RS07750;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 159557 162001 . + . ID=gene-AD11_RS07755;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AD11_RS07755;old_locus_tag=AD11_0975 NZ_JJLL01000108.1 Protein Homology CDS 159557 162001 . + 0 ID=cds-WP_000850306.1;Parent=gene-AD11_RS07755;Dbxref=GenBank:WP_000850306.1;Name=WP_000850306.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AD11_RS07755;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850306.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 162012 162629 . + . ID=gene-AD11_RS07760;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AD11_RS07760;old_locus_tag=AD11_0976 NZ_JJLL01000108.1 Protein Homology CDS 162012 162629 . + 0 ID=cds-WP_000213098.1;Parent=gene-AD11_RS07760;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AD11_RS07760;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 162631 163494 . + . ID=gene-AD11_RS07765;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AD11_RS07765;old_locus_tag=AD11_0977 NZ_JJLL01000108.1 Protein Homology CDS 162631 163494 . + 0 ID=cds-WP_001619270.1;Parent=gene-AD11_RS07765;Dbxref=GenBank:WP_001619270.1;Name=WP_001619270.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AD11_RS07765;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_001619270.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 163529 164155 . - . ID=gene-AD11_RS07770;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AD11_RS07770;old_locus_tag=AD11_0978 NZ_JJLL01000108.1 Protein Homology CDS 163529 164155 . - 0 ID=cds-WP_000165879.1;Parent=gene-AD11_RS07770;Dbxref=GenBank:WP_000165879.1;Name=WP_000165879.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415417.1;locus_tag=AD11_RS07770;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165879.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 164469 165617 . + . ID=gene-AD11_RS07775;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AD11_RS07775;old_locus_tag=AD11_0980 NZ_JJLL01000108.1 Protein Homology CDS 164469 165617 . + 0 ID=cds-WP_000109295.1;Parent=gene-AD11_RS07775;Dbxref=GenBank:WP_000109295.1;Name=WP_000109295.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309010.1;locus_tag=AD11_RS07775;product=MFS transporter;protein_id=WP_000109295.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 165827 167257 . + . ID=gene-AD11_RS07780;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=AD11_RS07780;old_locus_tag=AD11_0981 NZ_JJLL01000108.1 Protein Homology CDS 165827 167257 . + 0 ID=cds-WP_033865312.1;Parent=gene-AD11_RS07780;Dbxref=GenBank:WP_033865312.1;Name=WP_033865312.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AD11_RS07780;product=APC family permease;protein_id=WP_033865312.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 167258 168166 . - . ID=gene-AD11_RS07785;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=AD11_RS07785;old_locus_tag=AD11_0982 NZ_JJLL01000108.1 Protein Homology CDS 167258 168166 . - 0 ID=cds-WP_001242684.1;Parent=gene-AD11_RS07785;Dbxref=GenBank:WP_001242684.1;Name=WP_001242684.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycaN;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AD11_RS07785;product=LysR family transcriptional regulator;protein_id=WP_001242684.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 168266 168856 . + . ID=gene-AD11_RS07790;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=protein_coding;locus_tag=AD11_RS07790;old_locus_tag=AD11_0983 NZ_JJLL01000108.1 Protein Homology CDS 168266 168856 . + 0 ID=cds-WP_033865313.1;Parent=gene-AD11_RS07790;Dbxref=GenBank:WP_033865313.1;Name=WP_033865313.1;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AD11_RS07790;product=NAD(P)H oxidoreductase;protein_id=WP_033865313.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 168938 169678 . - . ID=gene-AD11_RS07795;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AD11_RS07795;old_locus_tag=AD11_0984 NZ_JJLL01000108.1 Protein Homology CDS 168938 169678 . - 0 ID=cds-WP_000111043.1;Parent=gene-AD11_RS07795;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AD11_RS07795;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 169870 172152 . - . ID=gene-AD11_RS07800;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AD11_RS07800;old_locus_tag=AD11_0985 NZ_JJLL01000108.1 Protein Homology CDS 169870 172152 . - 0 ID=cds-WP_001292822.1;Parent=gene-AD11_RS07800;Dbxref=GenBank:WP_001292822.1;Name=WP_001292822.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=AD11_RS07800;product=formate C-acetyltransferase;protein_id=WP_001292822.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 172207 173064 . - . ID=gene-AD11_RS31465;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AD11_RS31465;old_locus_tag=AD11_0986 NZ_JJLL01000108.1 Protein Homology CDS 172207 173064 . - 0 ID=cds-WP_000642546.1;Parent=gene-AD11_RS31465;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AD11_RS31465;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 173470 175230 . - . ID=gene-AD11_RS07810;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AD11_RS07810;old_locus_tag=AD11_0987 NZ_JJLL01000108.1 Protein Homology CDS 173470 175230 . - 0 ID=cds-WP_001295344.1;Parent=gene-AD11_RS07810;Dbxref=GenBank:WP_001295344.1;Name=WP_001295344.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AD11_RS07810;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001295344.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 175360 176052 . + . ID=gene-AD11_RS07815;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AD11_RS07815;old_locus_tag=AD11_0988 NZ_JJLL01000108.1 Protein Homology CDS 175360 176052 . + 0 ID=cds-WP_000642849.1;Parent=gene-AD11_RS07815;Dbxref=GenBank:WP_000642849.1;Name=WP_000642849.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AD11_RS07815;product=DUF421 domain-containing protein;protein_id=WP_000642849.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 176251 177339 . + . ID=gene-AD11_RS07820;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AD11_RS07820;old_locus_tag=AD11_0989 NZ_JJLL01000108.1 Protein Homology CDS 176251 177339 . + 0 ID=cds-WP_033865314.1;Parent=gene-AD11_RS07820;Dbxref=GenBank:WP_033865314.1;Name=WP_033865314.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415427.1;locus_tag=AD11_RS07820;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_033865314.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 177410 178693 . + . ID=gene-AD11_RS07825;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AD11_RS07825;old_locus_tag=AD11_0990 NZ_JJLL01000108.1 Protein Homology CDS 177410 178693 . + 0 ID=cds-WP_000445231.1;Parent=gene-AD11_RS07825;Dbxref=GenBank:WP_000445231.1;Name=WP_000445231.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AD11_RS07825;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_000445231.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 178862 179626 . + . ID=gene-AD11_RS07830;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AD11_RS07830;old_locus_tag=AD11_0991 NZ_JJLL01000108.1 Protein Homology CDS 178862 179626 . + 0 ID=cds-WP_001295345.1;Parent=gene-AD11_RS07830;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AD11_RS07830;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 179799 180482 . + . ID=gene-AD11_RS07835;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AD11_RS07835;old_locus_tag=AD11_0992 NZ_JJLL01000108.1 Protein Homology CDS 179799 180482 . + 0 ID=cds-WP_000125016.1;Parent=gene-AD11_RS07835;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AD11_RS07835;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 180593 182266 . + . ID=gene-AD11_RS07840;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AD11_RS07840;old_locus_tag=AD11_0993 NZ_JJLL01000108.1 Protein Homology CDS 180593 182266 . + 0 ID=cds-WP_032215223.1;Parent=gene-AD11_RS07840;Dbxref=GenBank:WP_032215223.1;Name=WP_032215223.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AD11_RS07840;product=30S ribosomal protein S1;protein_id=WP_032215223.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 182426 182710 . + . ID=gene-AD11_RS07845;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AD11_RS07845;old_locus_tag=AD11_0994 NZ_JJLL01000108.1 Protein Homology CDS 182426 182710 . + 0 ID=cds-WP_000167336.1;Parent=gene-AD11_RS07845;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AD11_RS07845;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 182918 185182 . + . ID=gene-AD11_RS07850;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=AD11_RS07850;old_locus_tag=AD11_0995 NZ_JJLL01000108.1 Protein Homology CDS 182918 185182 . + 0 ID=cds-WP_000705764.1;Parent=gene-AD11_RS07850;Dbxref=GenBank:WP_000705764.1;Name=WP_000705764.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AD11_RS07850;product=ComEC family protein;protein_id=WP_000705764.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 185219 186967 . + . ID=gene-AD11_RS07855;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AD11_RS07855;old_locus_tag=AD11_0996 NZ_JJLL01000108.1 Protein Homology CDS 185219 186967 . + 0 ID=cds-WP_000551270.1;Parent=gene-AD11_RS07855;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AD11_RS07855;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 186964 187950 . + . ID=gene-AD11_RS07860;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AD11_RS07860;old_locus_tag=AD11_0997 NZ_JJLL01000108.1 Protein Homology CDS 186964 187950 . + 0 ID=cds-WP_001619275.1;Parent=gene-AD11_RS07860;Dbxref=GenBank:WP_001619275.1;Name=WP_001619275.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706833.1;locus_tag=AD11_RS07860;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_001619275.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 187987 189219 . + . ID=gene-AD11_RS07865;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AD11_RS07865;old_locus_tag=AD11_0998 NZ_JJLL01000108.1 Protein Homology CDS 187987 189219 . + 0 ID=cds-WP_000056538.1;Parent=gene-AD11_RS07865;Dbxref=GenBank:WP_000056538.1;Name=WP_000056538.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415436.1;locus_tag=AD11_RS07865;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_000056538.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 189271 189453 . + . ID=gene-AD11_RS07870;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AD11_RS07870;old_locus_tag=AD11_0999 NZ_JJLL01000108.1 Protein Homology CDS 189271 189453 . + 0 ID=cds-WP_000350058.1;Parent=gene-AD11_RS07870;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AD11_RS07870;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 189450 190196 . + . ID=gene-AD11_RS07875;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AD11_RS07875;old_locus_tag=AD11_1000 NZ_JJLL01000108.1 Protein Homology CDS 189450 190196 . + 0 ID=cds-WP_021559130.1;Parent=gene-AD11_RS07875;Dbxref=GenBank:WP_021559130.1;Name=WP_021559130.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309028.1;locus_tag=AD11_RS07875;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_021559130.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 190350 191243 . + . ID=gene-AD11_RS07880;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AD11_RS07880;old_locus_tag=AD11_1001 NZ_JJLL01000108.1 Protein Homology CDS 190350 191243 . + 0 ID=cds-WP_000436922.1;Parent=gene-AD11_RS07880;Dbxref=GenBank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AD11_RS07880;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 191220 191999 . - . ID=gene-AD11_RS07885;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AD11_RS07885;old_locus_tag=AD11_1002 NZ_JJLL01000108.1 Protein Homology CDS 191220 191999 . - 0 ID=cds-WP_000899600.1;Parent=gene-AD11_RS07885;Dbxref=GenBank:WP_000899600.1;Name=WP_000899600.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309030.1;locus_tag=AD11_RS07885;product=envelope biogenesis factor ElyC;protein_id=WP_000899600.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 192135 192920 . + . ID=gene-AD11_RS07890;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AD11_RS07890;old_locus_tag=AD11_1003 NZ_JJLL01000108.1 Protein Homology CDS 192135 192920 . + 0 ID=cds-WP_001298300.1;Parent=gene-AD11_RS07890;Dbxref=GenBank:WP_001298300.1;Name=WP_001298300.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AD11_RS07890;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001298300.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 192917 194239 . + . ID=gene-AD11_RS07895;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AD11_RS07895;old_locus_tag=AD11_1004 NZ_JJLL01000108.1 Protein Homology CDS 192917 194239 . + 0 ID=cds-WP_001619280.1;Parent=gene-AD11_RS07895;Dbxref=GenBank:WP_001619280.1;Name=WP_001619280.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AD11_RS07895;product=chromosome partition protein MukF;protein_id=WP_001619280.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 194220 194924 . + . ID=gene-AD11_RS07900;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AD11_RS07900;old_locus_tag=AD11_1005 NZ_JJLL01000108.1 Protein Homology CDS 194220 194924 . + 0 ID=cds-WP_001295931.1;Parent=gene-AD11_RS07900;Dbxref=GenBank:WP_001295931.1;Name=WP_001295931.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459968.1;locus_tag=AD11_RS07900;product=chromosome partition protein MukE;protein_id=WP_001295931.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 194924 199384 . + . ID=gene-AD11_RS07905;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AD11_RS07905;old_locus_tag=AD11_1006 NZ_JJLL01000108.1 Protein Homology CDS 194924 199384 . + 0 ID=cds-WP_021559129.1;Parent=gene-AD11_RS07905;Dbxref=GenBank:WP_021559129.1;Name=WP_021559129.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=AD11_RS07905;product=chromosome partition protein MukB;protein_id=WP_021559129.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 199645 201492 . + . ID=gene-AD11_RS07910;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AD11_RS07910;old_locus_tag=AD11_1007 NZ_JJLL01000108.1 Protein Homology CDS 199645 201492 . + 0 ID=cds-WP_000925985.1;Parent=gene-AD11_RS07910;Dbxref=GenBank:WP_000925985.1;Name=WP_000925985.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AD11_RS07910;product=L%2CD-transpeptidase;protein_id=WP_000925985.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 201673 202221 . + . ID=gene-AD11_RS07915;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AD11_RS07915;old_locus_tag=AD11_1008 NZ_JJLL01000108.1 Protein Homology CDS 201673 202221 . + 0 ID=cds-WP_001295932.1;Parent=gene-AD11_RS07915;Dbxref=GenBank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AD11_RS07915;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 202248 202895 . + . ID=gene-AD11_RS07920;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AD11_RS07920;old_locus_tag=AD11_1009 NZ_JJLL01000108.1 Protein Homology CDS 202248 202895 . + 0 ID=cds-WP_001109487.1;Parent=gene-AD11_RS07920;Dbxref=GenBank:WP_001109487.1;Name=WP_001109487.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AD11_RS07920;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109487.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 203117 204307 . - . ID=gene-AD11_RS07925;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AD11_RS07925;old_locus_tag=AD11_1010 NZ_JJLL01000108.1 Protein Homology CDS 203117 204307 . - 0 ID=cds-WP_000462687.1;Parent=gene-AD11_RS07925;Dbxref=GenBank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AD11_RS07925;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 204492 205580 . - . ID=gene-AD11_RS07935;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AD11_RS07935;old_locus_tag=AD11_1011 NZ_JJLL01000108.1 Protein Homology CDS 204492 205580 . - 0 ID=cds-WP_033865317.1;Parent=gene-AD11_RS07935;Dbxref=GenBank:WP_033865317.1;Name=WP_033865317.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AD11_RS07935;product=porin OmpF;protein_id=WP_033865317.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 206183 207583 . - . ID=gene-AD11_RS07940;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AD11_RS07940;old_locus_tag=AD11_1013 NZ_JJLL01000108.1 Protein Homology CDS 206183 207583 . - 0 ID=cds-WP_000117881.1;Parent=gene-AD11_RS07940;Dbxref=GenBank:WP_000117881.1;Name=WP_000117881.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AD11_RS07940;product=asparagine--tRNA ligase;protein_id=WP_000117881.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 207752 208954 . - . ID=gene-AD11_RS07945;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AD11_RS07945;old_locus_tag=AD11_1014 NZ_JJLL01000108.1 Protein Homology CDS 207752 208954 . - 0 ID=cds-WP_001307697.1;Parent=gene-AD11_RS07945;Dbxref=GenBank:WP_001307697.1;Name=WP_001307697.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=AD11_RS07945;product=nicotinate phosphoribosyltransferase;protein_id=WP_001307697.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 209220 211832 . + . ID=gene-AD11_RS07950;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AD11_RS07950;old_locus_tag=AD11_1015 NZ_JJLL01000108.1 Protein Homology CDS 209220 211832 . + 0 ID=cds-WP_033866327.1;Parent=gene-AD11_RS07950;Dbxref=GenBank:WP_033866327.1;Name=WP_033866327.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AD11_RS07950;product=aminopeptidase N;protein_id=WP_033866327.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 211875 212642 . - . ID=gene-AD11_RS07955;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AD11_RS07955;old_locus_tag=AD11_1016 NZ_JJLL01000108.1 Protein Homology CDS 211875 212642 . - 0 ID=cds-WP_001090506.1;Parent=gene-AD11_RS07955;Dbxref=GenBank:WP_001090506.1;Name=WP_001090506.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309043.1;locus_tag=AD11_RS07955;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090506.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 212639 213430 . - . ID=gene-AD11_RS07960;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AD11_RS07960;old_locus_tag=AD11_1017 NZ_JJLL01000108.1 Protein Homology CDS 212639 213430 . - 0 ID=cds-WP_000235203.1;Parent=gene-AD11_RS07960;Dbxref=GenBank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AD11_RS07960;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 213441 214586 . - . ID=gene-AD11_RS07965;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AD11_RS07965;old_locus_tag=AD11_1018 NZ_JJLL01000108.1 Protein Homology CDS 213441 214586 . - 0 ID=cds-WP_033865321.1;Parent=gene-AD11_RS07965;Dbxref=GenBank:WP_033865321.1;Name=WP_033865321.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=AD11_RS07965;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_033865321.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 214583 215542 . - . ID=gene-AD11_RS07970;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AD11_RS07970;old_locus_tag=AD11_1019 NZ_JJLL01000108.1 Protein Homology CDS 214583 215542 . - 0 ID=cds-WP_001244308.1;Parent=gene-AD11_RS07970;Dbxref=GenBank:WP_001244308.1;Name=WP_001244308.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415456.4;locus_tag=AD11_RS07970;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_001244308.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 215535 216110 . - . ID=gene-AD11_RS07975;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AD11_RS07975;old_locus_tag=AD11_1020 NZ_JJLL01000108.1 Protein Homology CDS 215535 216110 . - 0 ID=cds-WP_001263933.1;Parent=gene-AD11_RS07975;Dbxref=GenBank:WP_001263933.1;Name=WP_001263933.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AD11_RS07975;product=NADPH-dependent FMN reductase;protein_id=WP_001263933.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 216466 217005 . + . ID=gene-AD11_RS07980;Name=elfA;gbkey=Gene;gene=elfA;gene_biotype=protein_coding;locus_tag=AD11_RS07980;old_locus_tag=AD11_1021 NZ_JJLL01000108.1 Protein Homology CDS 216466 217005 . + 0 ID=cds-WP_000750293.1;Parent=gene-AD11_RS07980;Dbxref=GenBank:WP_000750293.1;Name=WP_000750293.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AD11_RS07980;product=fimbrial protein;protein_id=WP_000750293.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 217088 217789 . + . ID=gene-AD11_RS07985;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=AD11_RS07985;old_locus_tag=AD11_1022 NZ_JJLL01000108.1 Protein Homology CDS 217088 217789 . + 0 ID=cds-WP_001295349.1;Parent=gene-AD11_RS07985;Dbxref=GenBank:WP_001295349.1;Name=WP_001295349.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AD11_RS07985;product=fimbrial biogenesis chaperone;protein_id=WP_001295349.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 217814 220414 . + . ID=gene-AD11_RS07990;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AD11_RS07990;old_locus_tag=AD11_1023 NZ_JJLL01000108.1 Protein Homology CDS 217814 220414 . + 0 ID=cds-WP_000286312.1;Parent=gene-AD11_RS07990;Dbxref=GenBank:WP_000286312.1;Name=WP_000286312.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415460.1;locus_tag=AD11_RS07990;product=fimbrial biogenesis usher protein;protein_id=WP_000286312.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 220405 221475 . + . ID=gene-AD11_RS07995;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=AD11_RS07995;old_locus_tag=AD11_1024 NZ_JJLL01000108.1 Protein Homology CDS 220405 221475 . + 0 ID=cds-WP_033866328.1;Parent=gene-AD11_RS07995;Dbxref=GenBank:WP_033866328.1;Name=WP_033866328.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AD11_RS07995;product=fimbrial protein;protein_id=WP_033866328.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 221487 222029 . + . ID=gene-AD11_RS08000;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=AD11_RS08000;old_locus_tag=AD11_1025 NZ_JJLL01000108.1 Protein Homology CDS 221487 222029 . + 0 ID=cds-WP_000730614.1;Parent=gene-AD11_RS08000;Dbxref=GenBank:WP_000730614.1;Name=WP_000730614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AD11_RS08000;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 222037 222552 . + . ID=gene-AD11_RS08005;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AD11_RS08005;old_locus_tag=AD11_1026 NZ_JJLL01000108.1 Protein Homology CDS 222037 222552 . + 0 ID=cds-WP_000919497.1;Parent=gene-AD11_RS08005;Dbxref=GenBank:WP_000919497.1;Name=WP_000919497.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AD11_RS08005;product=fimbrial protein;protein_id=WP_000919497.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 222518 223255 . + . ID=gene-AD11_RS08010;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=AD11_RS08010;old_locus_tag=AD11_1027 NZ_JJLL01000108.1 Protein Homology CDS 222518 223255 . + 0 ID=cds-WP_187439458.1;Parent=gene-AD11_RS08010;Dbxref=GenBank:WP_187439458.1;Name=WP_187439458.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AD11_RS08010;product=fimbrial chaperone;protein_id=WP_187439458.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 223366 224376 . + . ID=gene-AD11_RS08015;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AD11_RS08015;old_locus_tag=AD11_1028 NZ_JJLL01000108.1 Protein Homology CDS 223366 224376 . + 0 ID=cds-WP_001295352.1;Parent=gene-AD11_RS08015;Dbxref=GenBank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AD11_RS08015;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 224550 225092 . + . ID=gene-AD11_RS08020;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AD11_RS08020;old_locus_tag=AD11_1029 NZ_JJLL01000108.1 Protein Homology CDS 224550 225092 . + 0 ID=cds-WP_001295353.1;Parent=gene-AD11_RS08020;Dbxref=GenBank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AD11_RS08020;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 225089 226198 . - . ID=gene-AD11_RS08025;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AD11_RS08025;old_locus_tag=AD11_1030 NZ_JJLL01000108.1 Protein Homology CDS 225089 226198 . - 0 ID=cds-WP_001619284.1;Parent=gene-AD11_RS08025;Dbxref=GenBank:WP_001619284.1;Name=WP_001619284.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706870.1;locus_tag=AD11_RS08025;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_001619284.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 226442 228550 . + . ID=gene-AD11_RS08030;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AD11_RS08030;old_locus_tag=AD11_1031 NZ_JJLL01000108.1 Protein Homology CDS 226442 228550 . + 0 ID=cds-WP_033865323.1;Parent=gene-AD11_RS08030;Dbxref=GenBank:WP_033865323.1;Name=WP_033865323.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309059.1;locus_tag=AD11_RS08030;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_033865323.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 228561 230468 . + . ID=gene-AD11_RS08035;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AD11_RS08035;old_locus_tag=AD11_1032 NZ_JJLL01000108.1 Protein Homology CDS 228561 230468 . + 0 ID=cds-WP_000053089.1;Parent=gene-AD11_RS08035;Dbxref=GenBank:WP_000053089.1;Name=WP_000053089.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AD11_RS08035;product=ABC transporter ATP-binding protein;protein_id=WP_000053089.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 230598 231851 . + . ID=gene-AD11_RS08040;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AD11_RS08040;old_locus_tag=AD11_1033 NZ_JJLL01000108.1 Protein Homology CDS 230598 231851 . + 0 ID=cds-WP_033865324.1;Parent=gene-AD11_RS08040;Dbxref=GenBank:WP_033865324.1;Name=WP_033865324.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AD11_RS08040;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_033865324.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 231856 233496 . + . ID=gene-AD11_RS08045;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AD11_RS08045;old_locus_tag=AD11_1034 NZ_JJLL01000108.1 Protein Homology CDS 231856 233496 . + 0 ID=cds-WP_000445533.1;Parent=gene-AD11_RS08045;Dbxref=GenBank:WP_000445533.1;Name=WP_000445533.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AD11_RS08045;product=intermembrane transport protein PqiB;protein_id=WP_000445533.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 233493 234056 . + . ID=gene-AD11_RS08050;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AD11_RS08050;old_locus_tag=AD11_1035 NZ_JJLL01000108.1 Protein Homology CDS 233493 234056 . + 0 ID=cds-WP_000759120.1;Parent=gene-AD11_RS08050;Dbxref=GenBank:WP_000759120.1;Name=WP_000759120.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AD11_RS08050;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759120.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 234312 234479 . + . ID=gene-AD11_RS08055;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AD11_RS08055 NZ_JJLL01000108.1 Protein Homology CDS 234312 234479 . + 0 ID=cds-WP_000828648.1;Parent=gene-AD11_RS08055;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AD11_RS08055;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 234549 235067 . - . ID=gene-AD11_RS08060;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AD11_RS08060;old_locus_tag=AD11_1036 NZ_JJLL01000108.1 Protein Homology CDS 234549 235067 . - 0 ID=cds-WP_000227927.1;Parent=gene-AD11_RS08060;Dbxref=GenBank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AD11_RS08060;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 235136 236896 . - . ID=gene-AD11_RS08065;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AD11_RS08065;old_locus_tag=AD11_1037 NZ_JJLL01000108.1 Protein Homology CDS 235136 236896 . - 0 ID=cds-WP_000156518.1;Parent=gene-AD11_RS08065;Dbxref=GenBank:WP_000156518.1;Name=WP_000156518.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415475.1;locus_tag=AD11_RS08065;product=AAA family ATPase;protein_id=WP_000156518.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 237082 237534 . + . ID=gene-AD11_RS08070;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AD11_RS08070;old_locus_tag=AD11_1038 NZ_JJLL01000108.1 Protein Homology CDS 237082 237534 . + 0 ID=cds-WP_000877161.1;Parent=gene-AD11_RS08070;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AD11_RS08070;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 237610 238650 . - . ID=gene-AD11_RS08075;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AD11_RS08075;old_locus_tag=AD11_1039 NZ_JJLL01000108.1 Protein Homology CDS 237610 238650 . - 0 ID=cds-WP_001340343.1;Parent=gene-AD11_RS08075;Dbxref=GenBank:WP_001340343.1;Name=WP_001340343.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=AD11_RS08075;product=porin OmpA;protein_id=WP_001340343.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 239007 239516 . - . ID=gene-AD11_RS08085;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AD11_RS08085;old_locus_tag=AD11_1040 NZ_JJLL01000108.1 Protein Homology CDS 239007 239516 . - 0 ID=cds-WP_000288710.1;Parent=gene-AD11_RS08085;Dbxref=GenBank:WP_000288710.1;Name=WP_000288710.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AD11_RS08085;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 239735 240364 . + . ID=gene-AD11_RS08090;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AD11_RS08090;old_locus_tag=AD11_1041 NZ_JJLL01000108.1 Protein Homology CDS 239735 240364 . + 0 ID=cds-WP_000839153.1;Parent=gene-AD11_RS08090;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AD11_RS08090;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 240327 242489 . - . ID=gene-AD11_RS08095;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AD11_RS08095;old_locus_tag=AD11_1042 NZ_JJLL01000108.1 Protein Homology CDS 240327 242489 . - 0 ID=cds-WP_148724996.1;Parent=gene-AD11_RS08095;Dbxref=GenBank:WP_148724996.1;Name=WP_148724996.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AD11_RS08095;product=YccS family putative transporter;protein_id=WP_148724996.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 242499 242945 . - . ID=gene-AD11_RS08100;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AD11_RS08100;old_locus_tag=AD11_1043 NZ_JJLL01000108.1 Protein Homology CDS 242499 242945 . - 0 ID=cds-WP_001261235.1;Parent=gene-AD11_RS08100;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AD11_RS08100;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 243068 245122 . + . ID=gene-AD11_RS08105;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AD11_RS08105;old_locus_tag=AD11_1044 NZ_JJLL01000108.1 Protein Homology CDS 243068 245122 . + 0 ID=cds-WP_000420536.1;Parent=gene-AD11_RS08105;Dbxref=GenBank:WP_000420536.1;Name=WP_000420536.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AD11_RS08105;product=DNA helicase IV;protein_id=WP_000420536.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 245154 245612 . - . ID=gene-AD11_RS08110;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AD11_RS08110;old_locus_tag=AD11_1045 NZ_JJLL01000108.1 Protein Homology CDS 245154 245612 . - 0 ID=cds-WP_000424181.1;Parent=gene-AD11_RS08110;Dbxref=GenBank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AD11_RS08110;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 245708 246370 . - . ID=gene-AD11_RS08115;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AD11_RS08115;old_locus_tag=AD11_1046 NZ_JJLL01000108.1 Protein Homology CDS 245708 246370 . - 0 ID=cds-WP_000847791.1;Parent=gene-AD11_RS08115;Dbxref=GenBank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AD11_RS08115;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 246543 246956 . + . ID=gene-AD11_RS08125;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AD11_RS08125;old_locus_tag=AD11_1048 NZ_JJLL01000108.1 Protein Homology CDS 246543 246956 . + 0 ID=cds-WP_001301418.1;Parent=gene-AD11_RS08125;Dbxref=GenBank:WP_001301418.1;Name=WP_001301418.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415485.4;locus_tag=AD11_RS08125;product=CoA-binding protein;protein_id=WP_001301418.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 247001 247318 . - . ID=gene-AD11_RS08130;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AD11_RS08130;old_locus_tag=AD11_1049 NZ_JJLL01000108.1 Protein Homology CDS 247001 247318 . - 0 ID=cds-WP_001295356.1;Parent=gene-AD11_RS08130;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AD11_RS08130;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 247376 248566 . - . ID=gene-AD11_RS08135;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AD11_RS08135;old_locus_tag=AD11_1050 NZ_JJLL01000108.1 Protein Homology CDS 247376 248566 . - 0 ID=cds-WP_000116297.1;Parent=gene-AD11_RS08135;Dbxref=GenBank:WP_000116297.1;Name=WP_000116297.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AD11_RS08135;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000116297.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 248661 248939 . + . ID=gene-AD11_RS08140;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AD11_RS08140;old_locus_tag=AD11_1051 NZ_JJLL01000108.1 Protein Homology CDS 248661 248939 . + 0 ID=cds-WP_000048252.1;Parent=gene-AD11_RS08140;Dbxref=GenBank:WP_000048252.1;Name=WP_000048252.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AD11_RS08140;product=acylphosphatase;protein_id=WP_000048252.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 248936 249265 . - . ID=gene-AD11_RS08145;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AD11_RS08145;old_locus_tag=AD11_1052 NZ_JJLL01000108.1 Protein Homology CDS 248936 249265 . - 0 ID=cds-WP_000904442.1;Parent=gene-AD11_RS08145;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AD11_RS08145;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 249356 250015 . - . ID=gene-AD11_RS08150;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AD11_RS08150;old_locus_tag=AD11_1053 NZ_JJLL01000108.1 Protein Homology CDS 249356 250015 . - 0 ID=cds-WP_000375136.1;Parent=gene-AD11_RS08150;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AD11_RS08150;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 250222 250309 . - . ID=gene-AD11_RS08155;Name=AD11_RS08155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS08155;old_locus_tag=AD11_1054 NZ_JJLL01000108.1 tRNAscan-SE tRNA 250222 250309 . - . ID=rna-AD11_RS08155;Parent=gene-AD11_RS08155;anticodon=(pos:complement(250273..250275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS08155;product=tRNA-Ser NZ_JJLL01000108.1 tRNAscan-SE exon 250222 250309 . - . ID=exon-AD11_RS08155-1;Parent=rna-AD11_RS08155;anticodon=(pos:complement(250273..250275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS08155;product=tRNA-Ser NZ_JJLL01000108.1 RefSeq gene 250736 251854 . + . ID=gene-AD11_RS08160;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AD11_RS08160;old_locus_tag=AD11_1055 NZ_JJLL01000108.1 Protein Homology CDS 250736 251854 . + 0 ID=cds-WP_001058323.1;Parent=gene-AD11_RS08160;Dbxref=GenBank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AD11_RS08160;product=hydrogenase 1 small subunit;protein_id=WP_001058323.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 251851 253644 . + . ID=gene-AD11_RS08165;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AD11_RS08165;old_locus_tag=AD11_1056 NZ_JJLL01000108.1 Protein Homology CDS 251851 253644 . + 0 ID=cds-WP_032083963.1;Parent=gene-AD11_RS08165;Dbxref=GenBank:WP_032083963.1;Name=WP_032083963.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AD11_RS08165;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_032083963.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 253663 254370 . + . ID=gene-AD11_RS08170;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AD11_RS08170;old_locus_tag=AD11_1057 NZ_JJLL01000108.1 Protein Homology CDS 253663 254370 . + 0 ID=cds-WP_001186424.1;Parent=gene-AD11_RS08170;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AD11_RS08170;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 254367 254954 . + . ID=gene-AD11_RS08175;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AD11_RS08175;old_locus_tag=AD11_1058 NZ_JJLL01000108.1 Protein Homology CDS 254367 254954 . + 0 ID=cds-WP_000003671.1;Parent=gene-AD11_RS08175;Dbxref=GenBank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AD11_RS08175;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 254951 255349 . + . ID=gene-AD11_RS08180;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AD11_RS08180;old_locus_tag=AD11_1059 NZ_JJLL01000108.1 Protein Homology CDS 254951 255349 . + 0 ID=cds-WP_000063978.1;Parent=gene-AD11_RS08180;Dbxref=GenBank:WP_000063978.1;Name=WP_000063978.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AD11_RS08180;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063978.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 255346 256203 . + . ID=gene-AD11_RS08185;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AD11_RS08185;old_locus_tag=AD11_1060 NZ_JJLL01000108.1 Protein Homology CDS 255346 256203 . + 0 ID=cds-WP_000004899.1;Parent=gene-AD11_RS08185;Dbxref=GenBank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AD11_RS08185;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 256337 257881 . + . ID=gene-AD11_RS08190;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AD11_RS08190;old_locus_tag=AD11_1061 NZ_JJLL01000108.1 Protein Homology CDS 256337 257881 . + 0 ID=cds-WP_033865327.1;Parent=gene-AD11_RS08190;Dbxref=GenBank:WP_033865327.1;Name=WP_033865327.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415497.1;locus_tag=AD11_RS08190;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_033865327.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 257893 259029 . + . ID=gene-AD11_RS08195;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AD11_RS08195;old_locus_tag=AD11_1062 NZ_JJLL01000108.1 Protein Homology CDS 257893 259029 . + 0 ID=cds-WP_000460803.1;Parent=gene-AD11_RS08195;Dbxref=GenBank:WP_000460803.1;Name=WP_000460803.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415498.1;locus_tag=AD11_RS08195;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460803.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 259042 259134 . + . ID=gene-AD11_RS08200;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AD11_RS08200 NZ_JJLL01000108.1 Protein Homology CDS 259042 259134 . + 0 ID=cds-WP_000270305.1;Parent=gene-AD11_RS08200;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AD11_RS08200;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 259214 260512 . + . ID=gene-AD11_RS08205;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AD11_RS08205;old_locus_tag=AD11_1063 NZ_JJLL01000108.1 Protein Homology CDS 259214 260512 . + 0 ID=cds-WP_001300464.1;Parent=gene-AD11_RS08205;Dbxref=GenBank:WP_001300464.1;Name=WP_001300464.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AD11_RS08205;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001300464.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 260627 262807 . - . ID=gene-AD11_RS08210;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AD11_RS08210;old_locus_tag=AD11_1064 NZ_JJLL01000108.1 Protein Homology CDS 260627 262807 . - 0 ID=cds-WP_000208650.1;Parent=gene-AD11_RS08210;Dbxref=GenBank:WP_000208650.1;Name=WP_000208650.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415501.1;locus_tag=AD11_RS08210;product=tyrosine-protein kinase;protein_id=WP_000208650.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 262827 263273 . - . ID=gene-AD11_RS08215;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AD11_RS08215;old_locus_tag=AD11_1065 NZ_JJLL01000108.1 Protein Homology CDS 262827 263273 . - 0 ID=cds-WP_000057871.1;Parent=gene-AD11_RS08215;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AD11_RS08215;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 263261 264400 . - . ID=gene-AD11_RS08220;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AD11_RS08220;old_locus_tag=AD11_1066 NZ_JJLL01000108.1 Protein Homology CDS 263261 264400 . - 0 ID=cds-WP_001295357.1;Parent=gene-AD11_RS08220;Dbxref=GenBank:WP_001295357.1;Name=WP_001295357.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AD11_RS08220;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 264446 266542 . - . ID=gene-AD11_RS08225;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AD11_RS08225;old_locus_tag=AD11_1067 NZ_JJLL01000108.1 Protein Homology CDS 264446 266542 . - 0 ID=cds-WP_001543612.1;Parent=gene-AD11_RS08225;Dbxref=GenBank:WP_001543612.1;Name=WP_001543612.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309167.1;locus_tag=AD11_RS08225;product=YjbH domain-containing protein;protein_id=WP_001543612.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 266542 267288 . - . ID=gene-AD11_RS08230;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AD11_RS08230;old_locus_tag=AD11_1068 NZ_JJLL01000108.1 Protein Homology CDS 266542 267288 . - 0 ID=cds-WP_001038062.1;Parent=gene-AD11_RS08230;Dbxref=GenBank:WP_001038062.1;Name=WP_001038062.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AD11_RS08230;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038062.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 267285 267929 . - . ID=gene-AD11_RS08235;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AD11_RS08235;old_locus_tag=AD11_1069 NZ_JJLL01000108.1 Protein Homology CDS 267285 267929 . - 0 ID=cds-WP_001247610.1;Parent=gene-AD11_RS08235;Dbxref=GenBank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=AD11_RS08235;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 268036 268341 . - . ID=gene-AD11_RS08240;Name=AD11_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS08240;old_locus_tag=AD11_1070 NZ_JJLL01000108.1 Protein Homology CDS 268036 268341 . - 0 ID=cds-WP_001619295.1;Parent=gene-AD11_RS08240;Dbxref=GenBank:WP_001619295.1;Name=WP_001619295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000681082.1;locus_tag=AD11_RS08240;product=hypothetical protein;protein_id=WP_001619295.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 268783 268995 . - . ID=gene-AD11_RS08245;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AD11_RS08245;old_locus_tag=AD11_1071 NZ_JJLL01000108.1 Protein Homology CDS 268783 268995 . - 0 ID=cds-WP_000087763.1;Parent=gene-AD11_RS08245;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AD11_RS08245;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 269281 269493 . + . ID=gene-AD11_RS08250;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AD11_RS08250;old_locus_tag=AD11_1072 NZ_JJLL01000108.1 Protein Homology CDS 269281 269493 . + 0 ID=cds-WP_000066490.1;Parent=gene-AD11_RS08250;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AD11_RS08250;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 269504 269692 . + . ID=gene-AD11_RS28775;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AD11_RS28775 NZ_JJLL01000108.1 Protein Homology CDS 269504 269692 . + 0 ID=cds-WP_071524879.1;Parent=gene-AD11_RS28775;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AD11_RS28775;product=cold-shock protein;protein_id=WP_071524879.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 269667 269897 . + . ID=gene-AD11_RS08255;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AD11_RS08255 NZ_JJLL01000108.1 Protein Homology CDS 269667 269897 . + 0 ID=cds-WP_001309400.1;Parent=gene-AD11_RS08255;Dbxref=GenBank:WP_001309400.1;Name=WP_001309400.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415511.1;locus_tag=AD11_RS08255;product=protein YmcE;protein_id=WP_001309400.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 269887 270060 . + . ID=gene-AD11_RS08260;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AD11_RS08260;old_locus_tag=AD11_1074 NZ_JJLL01000108.1 Protein Homology CDS 269887 270060 . + 0 ID=cds-WP_001019197.1;Parent=gene-AD11_RS08260;Dbxref=GenBank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AD11_RS08260;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019197.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 270109 271182 . - . ID=gene-AD11_RS08265;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AD11_RS08265;old_locus_tag=AD11_1075 NZ_JJLL01000108.1 Protein Homology CDS 270109 271182 . - 0 ID=cds-WP_032083961.1;Parent=gene-AD11_RS08265;Dbxref=GenBank:WP_032083961.1;Name=WP_032083961.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AD11_RS08265;product=4Fe-4S binding protein;protein_id=WP_032083961.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 271254 273998 . - . ID=gene-AD11_RS08270;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AD11_RS08270;old_locus_tag=AD11_1076 NZ_JJLL01000108.1 Protein Homology CDS 271254 273998 . - 0 ID=cds-WP_071998684.1;Parent=gene-AD11_RS08270;Dbxref=GenBank:WP_071998684.1;Name=WP_071998684.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AD11_RS08270;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_071998684.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 274081 275109 . + . ID=gene-AD11_RS08275;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AD11_RS08275;old_locus_tag=AD11_1077 NZ_JJLL01000108.1 Protein Homology CDS 274081 275109 . + 0 ID=cds-WP_001264919.1;Parent=gene-AD11_RS08275;Dbxref=GenBank:WP_001264919.1;Name=WP_001264919.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AD11_RS08275;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264919.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 275082 275774 . - . ID=gene-AD11_RS08280;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AD11_RS08280;old_locus_tag=AD11_1078 NZ_JJLL01000108.1 Protein Homology CDS 275082 275774 . - 0 ID=cds-WP_001120125.1;Parent=gene-AD11_RS08280;Dbxref=GenBank:WP_001120125.1;Name=WP_001120125.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415515.1;locus_tag=AD11_RS08280;product=two-component system response regulator TorR;protein_id=WP_001120125.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 275904 277076 . + . ID=gene-AD11_RS08285;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AD11_RS08285;old_locus_tag=AD11_1079 NZ_JJLL01000108.1 Protein Homology CDS 275904 277076 . + 0 ID=cds-WP_033865329.1;Parent=gene-AD11_RS08285;Dbxref=GenBank:WP_033865329.1;Name=WP_033865329.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309178.1;locus_tag=AD11_RS08285;product=pentaheme c-type cytochrome TorC;protein_id=WP_033865329.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 277076 279622 . + . ID=gene-AD11_RS08290;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AD11_RS08290;old_locus_tag=AD11_1080 NZ_JJLL01000108.1 Protein Homology CDS 277076 279622 . + 0 ID=cds-WP_001543617.1;Parent=gene-AD11_RS08290;Dbxref=GenBank:WP_001543617.1;Name=WP_001543617.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AD11_RS08290;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_001543617.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 279619 280218 . + . ID=gene-AD11_RS08295;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AD11_RS08295;old_locus_tag=AD11_1081 NZ_JJLL01000108.1 Protein Homology CDS 279619 280218 . + 0 ID=cds-WP_001543618.1;Parent=gene-AD11_RS08295;Dbxref=GenBank:WP_001543618.1;Name=WP_001543618.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309180.1;locus_tag=AD11_RS08295;product=molecular chaperone TorD;protein_id=WP_001543618.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 280370 280675 . - . ID=gene-AD11_RS08300;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AD11_RS08300;old_locus_tag=AD11_1082 NZ_JJLL01000108.1 Protein Homology CDS 280370 280675 . - 0 ID=cds-WP_000024560.1;Parent=gene-AD11_RS08300;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AD11_RS08300;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 280675 281595 . - . ID=gene-AD11_RS08305;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AD11_RS08305;old_locus_tag=AD11_1083 NZ_JJLL01000108.1 Protein Homology CDS 280675 281595 . - 0 ID=cds-WP_000420617.1;Parent=gene-AD11_RS08305;Dbxref=GenBank:WP_000420617.1;Name=WP_000420617.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AD11_RS08305;product=curved DNA-binding protein;protein_id=WP_000420617.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 281855 283105 . + . ID=gene-AD11_RS08310;Name=AD11_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS08310;old_locus_tag=AD11_1084 NZ_JJLL01000108.1 Protein Homology CDS 281855 283105 . + 0 ID=cds-WP_033865330.1;Parent=gene-AD11_RS08310;Dbxref=GenBank:WP_033865330.1;Name=WP_033865330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415521.1;locus_tag=AD11_RS08310;product=YccE family protein;protein_id=WP_033865330.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 283400 284641 . + . ID=gene-AD11_RS08315;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AD11_RS08315;old_locus_tag=AD11_1086 NZ_JJLL01000108.1 Protein Homology CDS 283400 284641 . + 0 ID=cds-WP_001543620.1;Parent=gene-AD11_RS08315;Dbxref=GenBank:WP_001543620.1;Name=WP_001543620.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AD11_RS08315;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001543620.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 284679 284906 . - . ID=gene-AD11_RS08320;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AD11_RS08320;old_locus_tag=AD11_1087 NZ_JJLL01000108.1 Protein Homology CDS 284679 284906 . - 0 ID=cds-WP_001143120.1;Parent=gene-AD11_RS08320;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AD11_RS08320;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 284927 285523 . - . ID=gene-AD11_RS08325;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AD11_RS08325;old_locus_tag=AD11_1088 NZ_JJLL01000108.1 Protein Homology CDS 284927 285523 . - 0 ID=cds-WP_001151437.1;Parent=gene-AD11_RS08325;Dbxref=GenBank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AD11_RS08325;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 285896 286069 . + . ID=gene-AD11_RS08335;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AD11_RS08335 NZ_JJLL01000108.1 Protein Homology CDS 285896 286069 . + 0 ID=cds-WP_001273658.1;Parent=gene-AD11_RS08335;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AD11_RS08335;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 286327 287655 . - . ID=gene-AD11_RS08340;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AD11_RS08340;old_locus_tag=AD11_1089 NZ_JJLL01000108.1 Protein Homology CDS 286327 287655 . - 0 ID=cds-WP_001619302.1;Parent=gene-AD11_RS08340;Dbxref=GenBank:WP_001619302.1;Name=WP_001619302.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309279.2;locus_tag=AD11_RS08340;product=pyrimidine utilization transport protein G;protein_id=WP_001619302.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 287676 288170 . - . ID=gene-AD11_RS08345;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AD11_RS08345;old_locus_tag=AD11_1090 NZ_JJLL01000108.1 Protein Homology CDS 287676 288170 . - 0 ID=cds-WP_001028095.1;Parent=gene-AD11_RS08345;Dbxref=GenBank:WP_001028095.1;Name=WP_001028095.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309280.2;locus_tag=AD11_RS08345;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028095.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 288181 288771 . - . ID=gene-AD11_RS08350;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=AD11_RS08350;old_locus_tag=AD11_1091 NZ_JJLL01000108.1 Protein Homology CDS 288181 288771 . - 0 ID=cds-WP_001001189.1;Parent=gene-AD11_RS08350;Dbxref=GenBank:WP_001001189.1;Name=WP_001001189.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309281.1;locus_tag=AD11_RS08350;product=malonic semialdehyde reductase;protein_id=WP_001001189.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 288781 289581 . - . ID=gene-AD11_RS08355;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AD11_RS08355;old_locus_tag=AD11_1092 NZ_JJLL01000108.1 Protein Homology CDS 288781 289581 . - 0 ID=cds-WP_001619304.1;Parent=gene-AD11_RS08355;Dbxref=GenBank:WP_001619304.1;Name=WP_001619304.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309282.1;locus_tag=AD11_RS08355;product=pyrimidine utilization protein D;protein_id=WP_001619304.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 289589 289975 . - . ID=gene-AD11_RS08360;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AD11_RS08360;old_locus_tag=AD11_1093 NZ_JJLL01000108.1 Protein Homology CDS 289589 289975 . - 0 ID=cds-WP_001126780.1;Parent=gene-AD11_RS08360;Dbxref=GenBank:WP_001126780.1;Name=WP_001126780.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AD11_RS08360;product=3-aminoacrylate deaminase;protein_id=WP_001126780.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 289987 290679 . - . ID=gene-AD11_RS08365;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AD11_RS08365;old_locus_tag=AD11_1094 NZ_JJLL01000108.1 Protein Homology CDS 289987 290679 . - 0 ID=cds-WP_001307708.1;Parent=gene-AD11_RS08365;Dbxref=GenBank:WP_001307708.1;Name=WP_001307708.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AD11_RS08365;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001307708.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 290679 291770 . - . ID=gene-AD11_RS08370;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AD11_RS08370;old_locus_tag=AD11_1095 NZ_JJLL01000108.1 Protein Homology CDS 290679 291770 . - 0 ID=cds-WP_001619307.1;Parent=gene-AD11_RS08370;Dbxref=GenBank:WP_001619307.1;Name=WP_001619307.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AD11_RS08370;product=pyrimidine utilization protein A;protein_id=WP_001619307.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 292058 292696 . + . ID=gene-AD11_RS08375;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AD11_RS08375;old_locus_tag=AD11_1096 NZ_JJLL01000108.1 Protein Homology CDS 292058 292696 . + 0 ID=cds-WP_000191701.1;Parent=gene-AD11_RS08375;Dbxref=GenBank:WP_000191701.1;Name=WP_000191701.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AD11_RS08375;product=HTH-type transcriptional regulator RutR;protein_id=WP_000191701.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 292736 296698 . - . ID=gene-AD11_RS08380;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AD11_RS08380;old_locus_tag=AD11_1097 NZ_JJLL01000108.1 Protein Homology CDS 292736 296698 . - 0 ID=cds-WP_033865331.1;Parent=gene-AD11_RS08380;Dbxref=GenBank:WP_033865331.1;Name=WP_033865331.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415534.1;locus_tag=AD11_RS08380;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_033865331.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 296753 296962 . + . ID=gene-AD11_RS08385;Name=AD11_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS08385;old_locus_tag=AD11_1098 NZ_JJLL01000108.1 GeneMarkS-2+ CDS 296753 296962 . + 0 ID=cds-WP_000979516.1;Parent=gene-AD11_RS08385;Dbxref=GenBank:WP_000979516.1;Name=WP_000979516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS08385;product=hypothetical protein;protein_id=WP_000979516.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 297121 298629 . + . ID=gene-AD11_RS08390;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AD11_RS08390;old_locus_tag=AD11_1100 NZ_JJLL01000108.1 Protein Homology CDS 297121 298629 . + 0 ID=cds-WP_001018479.1;Parent=gene-AD11_RS08390;Dbxref=GenBank:WP_001018479.1;Name=WP_001018479.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AD11_RS08390;product=sodium/proline symporter PutP;protein_id=WP_001018479.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 299171 300001 . + . ID=gene-AD11_RS08400;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AD11_RS08400;old_locus_tag=AD11_1101 NZ_JJLL01000108.1 Protein Homology CDS 299171 300001 . + 0 ID=cds-WP_001619308.1;Parent=gene-AD11_RS08400;Dbxref=GenBank:WP_001619308.1;Name=WP_001619308.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AD11_RS08400;product=iron uptake transporter permease EfeU;protein_id=WP_001619308.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 300059 301186 . + . ID=gene-AD11_RS08405;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AD11_RS08405;old_locus_tag=AD11_1102 NZ_JJLL01000108.1 Protein Homology CDS 300059 301186 . + 0 ID=cds-WP_000154394.1;Parent=gene-AD11_RS08405;Dbxref=GenBank:WP_000154394.1;Name=WP_000154394.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309291.1;locus_tag=AD11_RS08405;product=iron uptake system protein EfeO;protein_id=WP_000154394.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 301192 302463 . + . ID=gene-AD11_RS08410;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AD11_RS08410;old_locus_tag=AD11_1103 NZ_JJLL01000108.1 Protein Homology CDS 301192 302463 . + 0 ID=cds-WP_001199463.1;Parent=gene-AD11_RS08410;Dbxref=GenBank:WP_001199463.1;Name=WP_001199463.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415538.1;locus_tag=AD11_RS08410;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_001199463.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 303084 303872 . + . ID=gene-AD11_RS08420;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AD11_RS08420;old_locus_tag=AD11_1104 NZ_JJLL01000108.1 Protein Homology CDS 303084 303872 . + 0 ID=cds-WP_000533534.1;Parent=gene-AD11_RS08420;Dbxref=GenBank:WP_000533534.1;Name=WP_000533534.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AD11_RS08420;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533534.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 304456 305142 . + . ID=gene-AD11_RS08425;Name=AD11_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS08425;old_locus_tag=AD11_1105 NZ_JJLL01000108.1 Protein Homology CDS 304456 305142 . + 0 ID=cds-WP_000009225.1-2;Parent=gene-AD11_RS08425;Dbxref=GenBank:WP_000009225.1;Name=WP_000009225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232851.1;locus_tag=AD11_RS08425;product=DUF2726 domain-containing protein;protein_id=WP_000009225.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 305596 305683 . - . ID=gene-AD11_RS08435;Name=AD11_RS08435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS08435;old_locus_tag=AD11_1106 NZ_JJLL01000108.1 tRNAscan-SE tRNA 305596 305683 . - . ID=rna-AD11_RS08435;Parent=gene-AD11_RS08435;anticodon=(pos:complement(305647..305649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS08435;product=tRNA-Ser NZ_JJLL01000108.1 tRNAscan-SE exon 305596 305683 . - . ID=exon-AD11_RS08435-1;Parent=rna-AD11_RS08435;anticodon=(pos:complement(305647..305649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS08435;product=tRNA-Ser NZ_JJLL01000108.1 RefSeq pseudogene 305917 306855 . + . ID=gene-AD11_RS31485;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=AD11_RS31485;pseudo=true NZ_JJLL01000108.1 Protein Homology CDS 305917 306855 . + 0 ID=cds-AD11_RS31485;Parent=gene-AD11_RS31485;Note=internal stop;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AD11_RS31485;product=glyoxylate/hydroxypyruvate reductase GhrA;pseudo=true;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 306910 307647 . + . ID=gene-AD11_RS08445;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AD11_RS08445;old_locus_tag=AD11_1109 NZ_JJLL01000108.1 Protein Homology CDS 306910 307647 . + 0 ID=cds-WP_000283667.1;Parent=gene-AD11_RS08445;Dbxref=GenBank:WP_000283667.1;Name=WP_000283667.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415552.1;locus_tag=AD11_RS08445;product=zinc-binding phosphatase;protein_id=WP_000283667.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 307671 308225 . + . ID=gene-AD11_RS08450;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AD11_RS08450;old_locus_tag=AD11_1110 NZ_JJLL01000108.1 Protein Homology CDS 307671 308225 . + 0 ID=cds-WP_001001921.1;Parent=gene-AD11_RS08450;Dbxref=GenBank:WP_001001921.1;Name=WP_001001921.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=AD11_RS08450;product=molecular chaperone YcdY;protein_id=WP_001001921.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 308327 308818 . + . ID=gene-AD11_RS08455;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AD11_RS08455;old_locus_tag=AD11_1111 NZ_JJLL01000108.1 Protein Homology CDS 308327 308818 . + 0 ID=cds-WP_001297187.1;Parent=gene-AD11_RS08455;Dbxref=GenBank:WP_001297187.1;Name=WP_001297187.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AD11_RS08455;product=DUF1097 domain-containing protein;protein_id=WP_001297187.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 308882 309715 . - . ID=gene-AD11_RS08460;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AD11_RS08460;old_locus_tag=AD11_1112 NZ_JJLL01000108.1 Protein Homology CDS 308882 309715 . - 0 ID=cds-WP_001189321.1;Parent=gene-AD11_RS08460;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AD11_RS08460;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 309742 310158 . - . ID=gene-AD11_RS08465;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=AD11_RS08465;old_locus_tag=AD11_1113 NZ_JJLL01000108.1 Protein Homology CDS 309742 310158 . - 0 ID=cds-WP_001264088.1;Parent=gene-AD11_RS08465;Dbxref=GenBank:WP_001264088.1;Name=WP_001264088.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AD11_RS08465;product=curli production assembly/transport protein CsgF;protein_id=WP_001264088.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 310183 310572 . - . ID=gene-AD11_RS08470;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AD11_RS08470;old_locus_tag=AD11_1114 NZ_JJLL01000108.1 Protein Homology CDS 310183 310572 . - 0 ID=cds-WP_000833288.1;Parent=gene-AD11_RS08470;Dbxref=GenBank:WP_000833288.1;Name=WP_000833288.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AD11_RS08470;product=curli production assembly/transport protein CsgE;protein_id=WP_000833288.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 310577 311227 . - . ID=gene-AD11_RS08475;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=AD11_RS08475;old_locus_tag=AD11_1115 NZ_JJLL01000108.1 Protein Homology CDS 310577 311227 . - 0 ID=cds-WP_000481505.1;Parent=gene-AD11_RS08475;Dbxref=GenBank:WP_000481505.1;Name=WP_000481505.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309444.1;locus_tag=AD11_RS08475;product=biofilm master transcriptional regulator CsgD;protein_id=WP_000481505.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 311982 312437 . + . ID=gene-AD11_RS08485;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AD11_RS08485;old_locus_tag=AD11_1118 NZ_JJLL01000108.1 Protein Homology CDS 311982 312437 . + 0 ID=cds-WP_000791650.1;Parent=gene-AD11_RS08485;Dbxref=GenBank:WP_000791650.1;Name=WP_000791650.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AD11_RS08485;product=curli minor subunit CsgB;protein_id=WP_000791650.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 312478 312933 . + . ID=gene-AD11_RS08490;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AD11_RS08490;old_locus_tag=AD11_1119 NZ_JJLL01000108.1 Protein Homology CDS 312478 312933 . + 0 ID=cds-WP_000771437.1;Parent=gene-AD11_RS08490;Dbxref=GenBank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AD11_RS08490;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 312992 313324 . + . ID=gene-AD11_RS08495;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AD11_RS08495;old_locus_tag=AD11_1120 NZ_JJLL01000108.1 Protein Homology CDS 312992 313324 . + 0 ID=cds-WP_001094300.1;Parent=gene-AD11_RS08495;Dbxref=GenBank:WP_001094300.1;Name=WP_001094300.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415561.1;locus_tag=AD11_RS08495;product=curli assembly chaperone CsgC;protein_id=WP_001094300.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 313445 313756 . + . ID=gene-AD11_RS08500;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AD11_RS08500;old_locus_tag=AD11_1121 NZ_JJLL01000108.1 Protein Homology CDS 313445 313756 . + 0 ID=cds-WP_000489587.1;Parent=gene-AD11_RS08500;Dbxref=GenBank:WP_000489587.1;Name=WP_000489587.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415562.1;locus_tag=AD11_RS08500;product=protein YmdA;protein_id=WP_000489587.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 313851 314384 . + . ID=gene-AD11_RS08505;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AD11_RS08505;old_locus_tag=AD11_1122 NZ_JJLL01000108.1 Protein Homology CDS 313851 314384 . + 0 ID=cds-WP_000857405.1;Parent=gene-AD11_RS08505;Dbxref=GenBank:WP_000857405.1;Name=WP_000857405.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AD11_RS08505;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 314326 315807 . + . ID=gene-AD11_RS08510;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AD11_RS08510;old_locus_tag=AD11_1123 NZ_JJLL01000108.1 Protein Homology CDS 314326 315807 . + 0 ID=cds-WP_001307714.1;Parent=gene-AD11_RS08510;Dbxref=GenBank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AD11_RS08510;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 315815 316972 . - . ID=gene-AD11_RS08515;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AD11_RS08515;old_locus_tag=AD11_1124 NZ_JJLL01000108.1 Protein Homology CDS 315815 316972 . - 0 ID=cds-WP_001070375.1;Parent=gene-AD11_RS08515;Dbxref=GenBank:WP_001070375.1;Name=WP_001070375.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415565.1;locus_tag=AD11_RS08515;product=glucans biosynthesis protein MdoC;protein_id=WP_001070375.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 317366 318901 . + . ID=gene-AD11_RS08530;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AD11_RS08530;old_locus_tag=AD11_1126 NZ_JJLL01000108.1 Protein Homology CDS 317366 318901 . + 0 ID=cds-WP_077747074.1;Parent=gene-AD11_RS08530;Dbxref=GenBank:WP_077747074.1;Name=WP_077747074.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AD11_RS08530;product=glucans biosynthesis protein MdoG;protein_id=WP_077747074.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 318894 321437 . + . ID=gene-AD11_RS08535;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AD11_RS08535;old_locus_tag=AD11_1127 NZ_JJLL01000108.1 Protein Homology CDS 318894 321437 . + 0 ID=cds-WP_001295445.1;Parent=gene-AD11_RS08535;Dbxref=GenBank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AD11_RS08535;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 321610 321837 . + . ID=gene-AD11_RS08540;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AD11_RS08540;old_locus_tag=AD11_1128 NZ_JJLL01000108.1 Protein Homology CDS 321610 321837 . + 0 ID=cds-WP_001237205.1;Parent=gene-AD11_RS08540;Dbxref=GenBank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AD11_RS08540;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 321838 322212 . - . ID=gene-AD11_RS08545;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AD11_RS08545;old_locus_tag=AD11_1129 NZ_JJLL01000108.1 Protein Homology CDS 321838 322212 . - 0 ID=cds-WP_000180056.1;Parent=gene-AD11_RS08545;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AD11_RS08545;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 322295 323521 . - . ID=gene-AD11_RS08555;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AD11_RS08555;old_locus_tag=AD11_1130 NZ_JJLL01000108.1 Protein Homology CDS 322295 323521 . - 0 ID=cds-WP_000074172.1;Parent=gene-AD11_RS08555;Dbxref=GenBank:WP_000074172.1;Name=WP_000074172.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AD11_RS08555;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 323693 324613 . - . ID=gene-AD11_RS08560;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AD11_RS08560;old_locus_tag=AD11_1131 NZ_JJLL01000108.1 Protein Homology CDS 323693 324613 . - 0 ID=cds-WP_000183364.1;Parent=gene-AD11_RS08560;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AD11_RS08560;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 324838 325890 . + . ID=gene-AD11_RS08565;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=AD11_RS08565;old_locus_tag=AD11_1132 NZ_JJLL01000108.1 Protein Homology CDS 324838 325890 . + 0 ID=cds-WP_001144615.1;Parent=gene-AD11_RS08565;Dbxref=GenBank:WP_001144615.1;Name=WP_001144615.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415573.1;locus_tag=AD11_RS08565;product=rhodanese-related sulfurtransferase;protein_id=WP_001144615.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 325932 326507 . - . ID=gene-AD11_RS08570;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AD11_RS08570;old_locus_tag=AD11_1133 NZ_JJLL01000108.1 Protein Homology CDS 325932 326507 . - 0 ID=cds-WP_000749261.1;Parent=gene-AD11_RS08570;Dbxref=GenBank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AD11_RS08570;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 326511 327077 . - . ID=gene-AD11_RS08575;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=protein_coding;locus_tag=AD11_RS08575;old_locus_tag=AD11_1134 NZ_JJLL01000108.1 Protein Homology CDS 326511 327077 . - 0 ID=cds-WP_000011114.1;Parent=gene-AD11_RS08575;Dbxref=GenBank:WP_000011114.1;Name=WP_000011114.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yceJ;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415575.1;locus_tag=AD11_RS08575;product=cytochrome b;protein_id=WP_000011114.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 327338 327451 . - . ID=gene-AD11_RS08580;Name=AD11_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS08580;old_locus_tag=AD11_1136 NZ_JJLL01000108.1 Protein Homology CDS 327338 327451 . - 0 ID=cds-WP_001253418.1;Parent=gene-AD11_RS08580;Dbxref=GenBank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AD11_RS08580;product=YceO family protein;protein_id=WP_001253418.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 327499 328617 . - . ID=gene-AD11_RS08585;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AD11_RS08585;old_locus_tag=AD11_1137 NZ_JJLL01000108.1 Protein Homology CDS 327499 328617 . - 0 ID=cds-WP_000872811.1;Parent=gene-AD11_RS08585;Dbxref=GenBank:WP_000872811.1;Name=WP_000872811.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309464.1;locus_tag=AD11_RS08585;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872811.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 328732 328986 . - . ID=gene-AD11_RS08590;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AD11_RS08590;old_locus_tag=AD11_1138 NZ_JJLL01000108.1 Protein Homology CDS 328732 328986 . - 0 ID=cds-WP_000414437.1;Parent=gene-AD11_RS08590;Dbxref=GenBank:WP_000414437.1;Name=WP_000414437.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309465.3;locus_tag=AD11_RS08590;product=biofilm formation regulator BssS;protein_id=WP_000414437.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 329276 329521 . - . ID=gene-AD11_RS08595;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AD11_RS08595;old_locus_tag=AD11_1139 NZ_JJLL01000108.1 Protein Homology CDS 329276 329521 . - 0 ID=cds-WP_001217754.1;Parent=gene-AD11_RS08595;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AD11_RS08595;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 329595 330641 . - . ID=gene-AD11_RS08600;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AD11_RS08600;old_locus_tag=AD11_1140 NZ_JJLL01000108.1 Protein Homology CDS 329595 330641 . - 0 ID=cds-WP_000126543.1;Parent=gene-AD11_RS08600;Dbxref=GenBank:WP_000126543.1;Name=WP_000126543.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AD11_RS08600;product=dihydroorotase;protein_id=WP_000126543.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 330747 331307 . - . ID=gene-AD11_RS08605;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=AD11_RS08605;old_locus_tag=AD11_1141 NZ_JJLL01000108.1 Protein Homology CDS 330747 331307 . - 0 ID=cds-WP_001295443.1;Parent=gene-AD11_RS08605;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AD11_RS08605;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 331441 332088 . - . ID=gene-AD11_RS08610;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AD11_RS08610;old_locus_tag=AD11_1142 NZ_JJLL01000108.1 Protein Homology CDS 331441 332088 . - 0 ID=cds-WP_000780912.1;Parent=gene-AD11_RS08610;Dbxref=GenBank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AD11_RS08610;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 332152 333360 . - . ID=gene-AD11_RS08615;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AD11_RS08615;old_locus_tag=AD11_1143 NZ_JJLL01000108.1 Protein Homology CDS 332152 333360 . - 0 ID=cds-WP_001619313.1;Parent=gene-AD11_RS08615;Dbxref=GenBank:WP_001619313.1;Name=WP_001619313.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AD11_RS08615;product=multidrug efflux MFS transporter MdtH;protein_id=WP_001619313.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 333596 334180 . + . ID=gene-AD11_RS08620;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AD11_RS08620;old_locus_tag=AD11_1144 NZ_JJLL01000108.1 Protein Homology CDS 333596 334180 . + 0 ID=cds-WP_000468186.1;Parent=gene-AD11_RS08620;Dbxref=GenBank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AD11_RS08620;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 334191 334838 . + . ID=gene-AD11_RS08625;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=AD11_RS08625;old_locus_tag=AD11_1145 NZ_JJLL01000108.1 Protein Homology CDS 334191 334838 . + 0 ID=cds-WP_000877107.1;Parent=gene-AD11_RS08625;Dbxref=GenBank:WP_000877107.1;Name=WP_000877107.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415585.1;locus_tag=AD11_RS08625;product=YceH family protein;protein_id=WP_000877107.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 334840 335763 . + . ID=gene-AD11_RS08630;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=AD11_RS08630;old_locus_tag=AD11_1146 NZ_JJLL01000108.1 Protein Homology CDS 334840 335763 . + 0 ID=cds-WP_000736158.1;Parent=gene-AD11_RS08630;Dbxref=GenBank:WP_000736158.1;Name=WP_000736158.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=yceM;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AD11_RS08630;product=Gfo/Idh/MocA family protein;protein_id=WP_000736158.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 335873 337408 . + . ID=gene-AD11_RS08635;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AD11_RS08635;old_locus_tag=AD11_1147 NZ_JJLL01000108.1 Protein Homology CDS 335873 337408 . + 0 ID=cds-WP_001459645.1;Parent=gene-AD11_RS08635;Dbxref=GenBank:WP_001459645.1;Name=WP_001459645.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AD11_RS08635;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001459645.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 337448 337864 . - . ID=gene-AD11_RS08640;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AD11_RS08640;old_locus_tag=AD11_1148 NZ_JJLL01000108.1 Protein Homology CDS 337448 337864 . - 0 ID=cds-WP_000197340.1;Parent=gene-AD11_RS08640;Dbxref=GenBank:WP_000197340.1;Name=WP_000197340.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415588.1;locus_tag=AD11_RS08640;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197340.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 337869 338162 . - . ID=gene-AD11_RS08645;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AD11_RS08645;old_locus_tag=AD11_1149 NZ_JJLL01000108.1 Protein Homology CDS 337869 338162 . - 0 ID=cds-WP_000020884.1;Parent=gene-AD11_RS08645;Dbxref=GenBank:WP_000020884.1;Name=WP_000020884.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309476.1;locus_tag=AD11_RS08645;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020884.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 338238 338897 . - . ID=gene-AD11_RS08650;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AD11_RS08650;old_locus_tag=AD11_1150 NZ_JJLL01000108.1 Protein Homology CDS 338238 338897 . - 0 ID=cds-WP_000905458.1;Parent=gene-AD11_RS08650;Dbxref=GenBank:WP_000905458.1;Name=WP_000905458.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415590.1;locus_tag=AD11_RS08650;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000905458.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 339052 339468 . + . ID=gene-AD11_RS08655;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AD11_RS08655;old_locus_tag=AD11_1152 NZ_JJLL01000108.1 Protein Homology CDS 339052 339468 . + 0 ID=cds-WP_000884702.1;Parent=gene-AD11_RS08655;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AD11_RS08655;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 339472 339876 . + . ID=gene-AD11_RS08660;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AD11_RS08660;old_locus_tag=AD11_1153 NZ_JJLL01000108.1 Protein Homology CDS 339472 339876 . + 0 ID=cds-WP_001196460.1;Parent=gene-AD11_RS08660;Dbxref=GenBank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AD11_RS08660;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 339888 340583 . + . ID=gene-AD11_RS08665;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AD11_RS08665;old_locus_tag=AD11_1154 NZ_JJLL01000108.1 Protein Homology CDS 339888 340583 . + 0 ID=cds-WP_000020484.1;Parent=gene-AD11_RS08665;Dbxref=GenBank:WP_000020484.1;Name=WP_000020484.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309480.1;locus_tag=AD11_RS08665;product=flagellar hook assembly protein FlgD;protein_id=WP_000020484.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 340608 341816 . + . ID=gene-AD11_RS08670;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AD11_RS08670;old_locus_tag=AD11_1155 NZ_JJLL01000108.1 Protein Homology CDS 340608 341816 . + 0 ID=cds-WP_000885854.1;Parent=gene-AD11_RS08670;Dbxref=GenBank:WP_000885854.1;Name=WP_000885854.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415594.1;locus_tag=AD11_RS08670;product=flagellar hook protein FlgE;protein_id=WP_000885854.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 341836 342591 . + . ID=gene-AD11_RS08675;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AD11_RS08675;old_locus_tag=AD11_1156 NZ_JJLL01000108.1 Protein Homology CDS 341836 342591 . + 0 ID=cds-WP_000349316.1;Parent=gene-AD11_RS08675;Dbxref=GenBank:WP_000349316.1;Name=WP_000349316.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AD11_RS08675;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 342763 343545 . + . ID=gene-AD11_RS08680;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AD11_RS08680;old_locus_tag=AD11_1157 NZ_JJLL01000108.1 Protein Homology CDS 342763 343545 . + 0 ID=cds-WP_000625837.1;Parent=gene-AD11_RS08680;Dbxref=GenBank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AD11_RS08680;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 343598 344296 . + . ID=gene-AD11_RS08685;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AD11_RS08685;old_locus_tag=AD11_1158 NZ_JJLL01000108.1 Protein Homology CDS 343598 344296 . + 0 ID=cds-WP_001295442.1;Parent=gene-AD11_RS08685;Dbxref=GenBank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AD11_RS08685;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 344308 345405 . + . ID=gene-AD11_RS08690;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AD11_RS08690;old_locus_tag=AD11_1159 NZ_JJLL01000108.1 Protein Homology CDS 344308 345405 . + 0 ID=cds-WP_000589326.1;Parent=gene-AD11_RS08690;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AD11_RS08690;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 345405 346346 . + . ID=gene-AD11_RS08695;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AD11_RS08695;old_locus_tag=AD11_1160 NZ_JJLL01000108.1 Protein Homology CDS 345405 346346 . + 0 ID=cds-WP_001295441.1;Parent=gene-AD11_RS08695;Dbxref=GenBank:WP_001295441.1;Name=WP_001295441.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AD11_RS08695;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 346412 348055 . + . ID=gene-AD11_RS08700;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AD11_RS08700;old_locus_tag=AD11_1161 NZ_JJLL01000108.1 Protein Homology CDS 346412 348055 . + 0 ID=cds-WP_000096479.1;Parent=gene-AD11_RS08700;Dbxref=GenBank:WP_000096479.1;Name=WP_000096479.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AD11_RS08700;product=flagellar hook-associated protein FlgK;protein_id=WP_000096479.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 348067 349020 . + . ID=gene-AD11_RS08705;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AD11_RS08705;old_locus_tag=AD11_1162 NZ_JJLL01000108.1 Protein Homology CDS 348067 349020 . + 0 ID=cds-WP_001212782.1;Parent=gene-AD11_RS08705;Dbxref=GenBank:WP_001212782.1;Name=WP_001212782.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415601.1;locus_tag=AD11_RS08705;product=flagellar hook-associated protein FlgL;protein_id=WP_001212782.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 349216 352401 . - . ID=gene-AD11_RS08710;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AD11_RS08710;old_locus_tag=AD11_1163 NZ_JJLL01000108.1 Protein Homology CDS 349216 352401 . - 0 ID=cds-WP_000827360.1;Parent=gene-AD11_RS08710;Dbxref=GenBank:WP_000827360.1;Name=WP_000827360.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415602.1;locus_tag=AD11_RS08710;product=ribonuclease E;protein_id=WP_000827360.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 352974 353933 . + . ID=gene-AD11_RS08720;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AD11_RS08720;old_locus_tag=AD11_1165 NZ_JJLL01000108.1 Protein Homology CDS 352974 353933 . + 0 ID=cds-WP_000846343.1;Parent=gene-AD11_RS08720;Dbxref=GenBank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AD11_RS08720;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 354045 354629 . - . ID=gene-AD11_RS08725;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AD11_RS08725;old_locus_tag=AD11_1166 NZ_JJLL01000108.1 Protein Homology CDS 354045 354629 . - 0 ID=cds-WP_001125202.1;Parent=gene-AD11_RS08725;Dbxref=GenBank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AD11_RS08725;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 354828 355349 . + . ID=gene-AD11_RS08730;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AD11_RS08730;old_locus_tag=AD11_1167 NZ_JJLL01000108.1 Protein Homology CDS 354828 355349 . + 0 ID=cds-WP_001174481.1;Parent=gene-AD11_RS08730;Dbxref=GenBank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AD11_RS08730;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 355401 355574 . + . ID=gene-AD11_RS08735;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AD11_RS08735;old_locus_tag=AD11_1168 NZ_JJLL01000108.1 Protein Homology CDS 355401 355574 . + 0 ID=cds-WP_000290727.1;Parent=gene-AD11_RS08735;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AD11_RS08735;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 355655 356725 . + . ID=gene-AD11_RS08740;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AD11_RS08740;old_locus_tag=AD11_1169 NZ_JJLL01000108.1 Protein Homology CDS 355655 356725 . + 0 ID=cds-WP_000197578.1;Parent=gene-AD11_RS08740;Dbxref=GenBank:WP_000197578.1;Name=WP_000197578.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AD11_RS08740;product=phosphate acyltransferase PlsX;protein_id=WP_000197578.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 356793 357746 . + . ID=gene-AD11_RS08745;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AD11_RS08745;old_locus_tag=AD11_1170 NZ_JJLL01000108.1 Protein Homology CDS 356793 357746 . + 0 ID=cds-WP_000288132.1;Parent=gene-AD11_RS08745;Dbxref=GenBank:WP_000288132.1;Name=WP_000288132.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AD11_RS08745;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 357762 358691 . + . ID=gene-AD11_RS08750;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AD11_RS08750;old_locus_tag=AD11_1171 NZ_JJLL01000108.1 Protein Homology CDS 357762 358691 . + 0 ID=cds-WP_000191372.1;Parent=gene-AD11_RS08750;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AD11_RS08750;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 358704 359438 . + . ID=gene-AD11_RS08755;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AD11_RS08755;old_locus_tag=AD11_1172 NZ_JJLL01000108.1 Protein Homology CDS 358704 359438 . + 0 ID=cds-WP_001008535.1;Parent=gene-AD11_RS08755;Dbxref=GenBank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AD11_RS08755;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 359649 359885 . + . ID=gene-AD11_RS08760;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AD11_RS08760;old_locus_tag=AD11_1173 NZ_JJLL01000108.1 Protein Homology CDS 359649 359885 . + 0 ID=cds-WP_000103754.1;Parent=gene-AD11_RS08760;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AD11_RS08760;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 359973 361214 . + . ID=gene-AD11_RS08765;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AD11_RS08765;old_locus_tag=AD11_1174 NZ_JJLL01000108.1 Protein Homology CDS 359973 361214 . + 0 ID=cds-WP_000044679.1;Parent=gene-AD11_RS08765;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AD11_RS08765;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 361334 362143 . + . ID=gene-AD11_RS08770;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AD11_RS08770;old_locus_tag=AD11_1175 NZ_JJLL01000108.1 Protein Homology CDS 361334 362143 . + 0 ID=cds-WP_000478681.1;Parent=gene-AD11_RS08770;Dbxref=GenBank:WP_000478681.1;Name=WP_000478681.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415614.1;locus_tag=AD11_RS08770;product=aminodeoxychorismate lyase;protein_id=WP_000478681.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 362146 363168 . + . ID=gene-AD11_RS08775;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AD11_RS08775;old_locus_tag=AD11_1176 NZ_JJLL01000108.1 Protein Homology CDS 362146 363168 . + 0 ID=cds-WP_000756827.1;Parent=gene-AD11_RS08775;Dbxref=GenBank:WP_000756827.1;Name=WP_000756827.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AD11_RS08775;product=cell division protein YceG;protein_id=WP_000756827.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 363158 363799 . + . ID=gene-AD11_RS08780;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AD11_RS08780;old_locus_tag=AD11_1177 NZ_JJLL01000108.1 Protein Homology CDS 363158 363799 . + 0 ID=cds-WP_001257000.1;Parent=gene-AD11_RS08780;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AD11_RS08780;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 363796 364800 . + . ID=gene-AD11_RS08785;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AD11_RS08785;old_locus_tag=AD11_1178 NZ_JJLL01000108.1 Protein Homology CDS 363796 364800 . + 0 ID=cds-WP_001267956.1;Parent=gene-AD11_RS08785;Dbxref=GenBank:WP_001267956.1;Name=WP_001267956.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415617.1;locus_tag=AD11_RS08785;product=DNA polymerase III subunit delta';protein_id=WP_001267956.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 364811 365608 . + . ID=gene-AD11_RS08790;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=AD11_RS08790;old_locus_tag=AD11_1179 NZ_JJLL01000108.1 Protein Homology CDS 364811 365608 . + 0 ID=cds-WP_000480245.1;Parent=gene-AD11_RS08790;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AD11_RS08790;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 365903 367336 . + . ID=gene-AD11_RS08795;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AD11_RS08795;old_locus_tag=AD11_1180 NZ_JJLL01000108.1 Protein Homology CDS 365903 367336 . + 0 ID=cds-WP_000475719.1;Parent=gene-AD11_RS08795;Dbxref=GenBank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AD11_RS08795;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 367396 369585 . - . ID=gene-AD11_RS08800;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=AD11_RS08800;old_locus_tag=AD11_1181 NZ_JJLL01000108.1 Protein Homology CDS 367396 369585 . - 0 ID=cds-WP_000953441.1;Parent=gene-AD11_RS08800;Dbxref=GenBank:WP_000953441.1;Name=WP_000953441.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415620.1;locus_tag=AD11_RS08800;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000953441.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 369919 370278 . + . ID=gene-AD11_RS08805;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AD11_RS08805;old_locus_tag=AD11_1183 NZ_JJLL01000108.1 Protein Homology CDS 369919 370278 . + 0 ID=cds-WP_000807125.1;Parent=gene-AD11_RS08805;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AD11_RS08805;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 370281 370658 . + . ID=gene-AD11_RS08810;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=AD11_RS08810;old_locus_tag=AD11_1184 NZ_JJLL01000108.1 Protein Homology CDS 370281 370658 . + 0 ID=cds-WP_001225295.1;Parent=gene-AD11_RS08810;Dbxref=GenBank:WP_001225295.1;Name=WP_001225295.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415622.1;locus_tag=AD11_RS08810;product=YcfL family protein;protein_id=WP_001225295.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 370672 371313 . + . ID=gene-AD11_RS08815;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AD11_RS08815;old_locus_tag=AD11_1185 NZ_JJLL01000108.1 Protein Homology CDS 370672 371313 . + 0 ID=cds-WP_000164439.1;Parent=gene-AD11_RS08815;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AD11_RS08815;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 371294 372118 . + . ID=gene-AD11_RS08820;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AD11_RS08820;old_locus_tag=AD11_1186 NZ_JJLL01000108.1 Protein Homology CDS 371294 372118 . + 0 ID=cds-WP_001116592.1;Parent=gene-AD11_RS08820;Dbxref=GenBank:WP_001116592.1;Name=WP_001116592.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415624.1;locus_tag=AD11_RS08820;product=thiamine kinase;protein_id=WP_001116592.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 372129 373154 . + . ID=gene-AD11_RS08825;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AD11_RS08825;old_locus_tag=AD11_1187 NZ_JJLL01000108.1 Protein Homology CDS 372129 373154 . + 0 ID=cds-WP_000529320.1;Parent=gene-AD11_RS08825;Dbxref=GenBank:WP_000529320.1;Name=WP_000529320.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AD11_RS08825;product=beta-N-acetylhexosaminidase;protein_id=WP_000529320.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 373177 373719 . + . ID=gene-AD11_RS08830;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AD11_RS08830;old_locus_tag=AD11_1188 NZ_JJLL01000108.1 Protein Homology CDS 373177 373719 . + 0 ID=cds-WP_000587933.1;Parent=gene-AD11_RS08830;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AD11_RS08830;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 374119 375423 . + . ID=gene-AD11_RS08835;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AD11_RS08835;old_locus_tag=AD11_1189 NZ_JJLL01000108.1 Protein Homology CDS 374119 375423 . + 0 ID=cds-WP_000211045.1;Parent=gene-AD11_RS08835;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AD11_RS08835;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 375650 376189 . + . ID=gene-AD11_RS08840;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=AD11_RS08840;old_locus_tag=AD11_1190 NZ_JJLL01000108.1 Protein Homology CDS 375650 376189 . + 0 ID=cds-WP_001043459.1;Parent=gene-AD11_RS08840;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AD11_RS08840;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 376251 376883 . - . ID=gene-AD11_RS08845;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AD11_RS08845;old_locus_tag=AD11_1191 NZ_JJLL01000108.1 Protein Homology CDS 376251 376883 . - 0 ID=cds-WP_001336528.1;Parent=gene-AD11_RS08845;Dbxref=GenBank:WP_001336528.1;Name=WP_001336528.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AD11_RS08845;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_001336528.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 377124 377381 . + . ID=gene-AD11_RS08850;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AD11_RS08850;old_locus_tag=AD11_1192 NZ_JJLL01000108.1 Protein Homology CDS 377124 377381 . + 0 ID=cds-WP_000800153.1;Parent=gene-AD11_RS08850;Dbxref=GenBank:WP_000800153.1;Name=WP_000800153.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AD11_RS08850;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 377464 378426 . - . ID=gene-AD11_RS08855;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AD11_RS08855;old_locus_tag=AD11_1193 NZ_JJLL01000108.1 Protein Homology CDS 377464 378426 . - 0 ID=cds-WP_001300895.1;Parent=gene-AD11_RS08855;Dbxref=GenBank:WP_001300895.1;Name=WP_001300895.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AD11_RS08855;product=L%2CD-transpeptidase LdtC;protein_id=WP_001300895.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 378570 382016 . - . ID=gene-AD11_RS08860;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AD11_RS08860;old_locus_tag=AD11_1194 NZ_JJLL01000108.1 Protein Homology CDS 378570 382016 . - 0 ID=cds-WP_001115094.1;Parent=gene-AD11_RS08860;Dbxref=GenBank:WP_001115094.1;Name=WP_001115094.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AD11_RS08860;product=transcription-repair coupling factor;protein_id=WP_001115094.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 382144 383217 . - . ID=gene-AD11_RS08865;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=AD11_RS08865;old_locus_tag=AD11_1195 NZ_JJLL01000108.1 Protein Homology CDS 382144 383217 . - 0 ID=cds-WP_000810253.1;Parent=gene-AD11_RS08865;Dbxref=GenBank:WP_000810253.1;Name=WP_000810253.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AD11_RS08865;product=acyltransferase family protein;protein_id=WP_000810253.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 383479 384678 . + . ID=gene-AD11_RS08870;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AD11_RS08870;old_locus_tag=AD11_1196 NZ_JJLL01000108.1 Protein Homology CDS 383479 384678 . + 0 ID=cds-WP_000284714.1;Parent=gene-AD11_RS08870;Dbxref=GenBank:WP_000284714.1;Name=WP_000284714.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AD11_RS08870;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 384671 385372 . + . ID=gene-AD11_RS08875;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AD11_RS08875;old_locus_tag=AD11_1197 NZ_JJLL01000108.1 Protein Homology CDS 384671 385372 . + 0 ID=cds-WP_001033694.1;Parent=gene-AD11_RS08875;Dbxref=GenBank:WP_001033694.1;Name=WP_001033694.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415635.4;locus_tag=AD11_RS08875;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033694.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 385372 386616 . + . ID=gene-AD11_RS08880;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AD11_RS08880;old_locus_tag=AD11_1198 NZ_JJLL01000108.1 Protein Homology CDS 385372 386616 . + 0 ID=cds-WP_001251348.1;Parent=gene-AD11_RS08880;Dbxref=GenBank:WP_001251348.1;Name=WP_001251348.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415636.1;locus_tag=AD11_RS08880;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251348.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 386645 387556 . + . ID=gene-AD11_RS08885;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AD11_RS08885;old_locus_tag=AD11_1199 NZ_JJLL01000108.1 Protein Homology CDS 386645 387556 . + 0 ID=cds-WP_000291267.1;Parent=gene-AD11_RS08885;Dbxref=GenBank:WP_000291267.1;Name=WP_000291267.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AD11_RS08885;product=N-acetylglucosamine kinase;protein_id=WP_000291267.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 387572 388411 . + . ID=gene-AD11_RS08890;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AD11_RS08890;old_locus_tag=AD11_1200 NZ_JJLL01000108.1 Protein Homology CDS 387572 388411 . + 0 ID=cds-WP_000952737.1;Parent=gene-AD11_RS08890;Dbxref=GenBank:WP_000952737.1;Name=WP_000952737.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415638.3;locus_tag=AD11_RS08890;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952737.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 388531 389319 . - . ID=gene-AD11_RS08895;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=AD11_RS08895;old_locus_tag=AD11_1201 NZ_JJLL01000108.1 Protein Homology CDS 388531 389319 . - 0 ID=cds-WP_000713462.1;Parent=gene-AD11_RS08895;Dbxref=GenBank:WP_000713462.1;Name=WP_000713462.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ycfZ;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AD11_RS08895;product=TPM domain-containing protein;protein_id=WP_000713462.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 389316 389777 . - . ID=gene-AD11_RS08900;Name=ymfA;gbkey=Gene;gene=ymfA;gene_biotype=protein_coding;locus_tag=AD11_RS08900;old_locus_tag=AD11_1202 NZ_JJLL01000108.1 Protein Homology CDS 389316 389777 . - 0 ID=cds-WP_000076376.1;Parent=gene-AD11_RS08900;Dbxref=GenBank:WP_000076376.1;Name=WP_000076376.1;gbkey=CDS;gene=ymfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415640.2;locus_tag=AD11_RS08900;product=DUF3592 domain-containing protein;protein_id=WP_000076376.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 389835 390881 . - . ID=gene-AD11_RS08905;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AD11_RS08905;old_locus_tag=AD11_1203 NZ_JJLL01000108.1 Protein Homology CDS 389835 390881 . - 0 ID=cds-WP_000759317.1;Parent=gene-AD11_RS08905;Dbxref=GenBank:WP_000759317.1;Name=WP_000759317.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AD11_RS08905;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759317.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 390878 391672 . - . ID=gene-AD11_RS08910;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AD11_RS08910;old_locus_tag=AD11_1204 NZ_JJLL01000108.1 Protein Homology CDS 390878 391672 . - 0 ID=cds-WP_000580316.1;Parent=gene-AD11_RS08910;Dbxref=GenBank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AD11_RS08910;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 391669 392526 . - . ID=gene-AD11_RS08915;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AD11_RS08915;old_locus_tag=AD11_1205 NZ_JJLL01000108.1 Protein Homology CDS 391669 392526 . - 0 ID=cds-WP_000799401.1;Parent=gene-AD11_RS08915;Dbxref=GenBank:WP_000799401.1;Name=WP_000799401.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=AD11_RS08915;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 392510 393646 . - . ID=gene-AD11_RS08920;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AD11_RS08920;old_locus_tag=AD11_1206 NZ_JJLL01000108.1 Protein Homology CDS 392510 393646 . - 0 ID=cds-WP_000531601.1;Parent=gene-AD11_RS08920;Dbxref=GenBank:WP_000531601.1;Name=WP_000531601.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AD11_RS08920;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531601.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 393896 395122 . + . ID=gene-AD11_RS08930;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AD11_RS08930;old_locus_tag=AD11_1207 NZ_JJLL01000108.1 Protein Homology CDS 393896 395122 . + 0 ID=cds-WP_000359441.1;Parent=gene-AD11_RS08930;Dbxref=GenBank:WP_000359441.1;Name=WP_000359441.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309599.1;locus_tag=AD11_RS08930;product=peptidase T;protein_id=WP_000359441.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 395171 396292 . - . ID=gene-AD11_RS08935;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AD11_RS08935;old_locus_tag=AD11_1208 NZ_JJLL01000108.1 Protein Homology CDS 395171 396292 . - 0 ID=cds-WP_001295435.1;Parent=gene-AD11_RS08935;Dbxref=GenBank:WP_001295435.1;Name=WP_001295435.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309600.2;locus_tag=AD11_RS08935;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_001295435.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 396368 397828 . - . ID=gene-AD11_RS08940;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AD11_RS08940;old_locus_tag=AD11_1209 NZ_JJLL01000108.1 Protein Homology CDS 396368 397828 . - 0 ID=cds-WP_000735411.1;Parent=gene-AD11_RS08940;Dbxref=GenBank:WP_000735411.1;Name=WP_000735411.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AD11_RS08940;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735411.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 397828 398499 . - . ID=gene-AD11_RS08945;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AD11_RS08945;old_locus_tag=AD11_1210 NZ_JJLL01000108.1 Protein Homology CDS 397828 398499 . - 0 ID=cds-WP_001265471.1;Parent=gene-AD11_RS08945;Dbxref=GenBank:WP_001265471.1;Name=WP_001265471.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415648.1;locus_tag=AD11_RS08945;product=two-component system response regulator PhoP;protein_id=WP_001265471.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 398668 400038 . - . ID=gene-AD11_RS08950;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AD11_RS08950;old_locus_tag=AD11_1211 NZ_JJLL01000108.1 Protein Homology CDS 398668 400038 . - 0 ID=cds-WP_033865335.1;Parent=gene-AD11_RS08950;Dbxref=GenBank:WP_033865335.1;Name=WP_033865335.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AD11_RS08950;product=adenylosuccinate lyase;protein_id=WP_033865335.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 400042 400683 . - . ID=gene-AD11_RS08955;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AD11_RS08955;old_locus_tag=AD11_1212 NZ_JJLL01000108.1 Protein Homology CDS 400042 400683 . - 0 ID=cds-WP_001297479.1;Parent=gene-AD11_RS08955;Dbxref=GenBank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AD11_RS08955;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 400719 401825 . - . ID=gene-AD11_RS08960;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AD11_RS08960;old_locus_tag=AD11_1213 NZ_JJLL01000108.1 Protein Homology CDS 400719 401825 . - 0 ID=cds-WP_001297484.1;Parent=gene-AD11_RS08960;Dbxref=GenBank:WP_001297484.1;Name=WP_001297484.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AD11_RS08960;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001297484.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 401879 402340 . - . ID=gene-AD11_RS08965;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AD11_RS08965;old_locus_tag=AD11_1214 NZ_JJLL01000108.1 Protein Homology CDS 401879 402340 . - 0 ID=cds-WP_000476093.1;Parent=gene-AD11_RS08965;Dbxref=GenBank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AD11_RS08965;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 402350 403003 . - . ID=gene-AD11_RS08970;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AD11_RS08970;old_locus_tag=AD11_1215 NZ_JJLL01000108.1 Protein Homology CDS 402350 403003 . - 0 ID=cds-WP_001248661.1;Parent=gene-AD11_RS08970;Dbxref=GenBank:WP_001248661.1;Name=WP_001248661.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AD11_RS08970;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248661.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 403175 404425 . + . ID=gene-AD11_RS08975;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AD11_RS08975;old_locus_tag=AD11_1216 NZ_JJLL01000108.1 Protein Homology CDS 403175 404425 . + 0 ID=cds-WP_033865357.1;Parent=gene-AD11_RS08975;Dbxref=GenBank:WP_033865357.1;Name=WP_033865357.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AD11_RS08975;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_033865357.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 404528 404851 . - . ID=gene-AD11_RS08980;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AD11_RS08980 NZ_JJLL01000108.1 Protein Homology CDS 404528 404851 . - 0 ID=cds-WP_001295666.1;Parent=gene-AD11_RS08980;Dbxref=GenBank:WP_001295666.1;Name=WP_001295666.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AD11_RS08980;product=anti-adapter protein IraM;protein_id=WP_001295666.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 405109 405153 . - . ID=gene-AD11_RS32035;Name=AD11_RS32035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32035 NZ_JJLL01000108.1 Protein Homology CDS 405109 405153 . - 0 ID=cds-WP_120795380.1;Parent=gene-AD11_RS32035;Dbxref=GenBank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AD11_RS32035;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 405389 405499 . - . ID=gene-AD11_RS31490;Name=AD11_RS31490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31490 NZ_JJLL01000108.1 Protein Homology CDS 405389 405499 . - 0 ID=cds-WP_032082692.1;Parent=gene-AD11_RS31490;Dbxref=GenBank:WP_032082692.1;Name=WP_032082692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AD11_RS31490;product=hypothetical protein;protein_id=WP_032082692.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 405552 405956 . - . ID=gene-AD11_RS08990;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=AD11_RS08990;old_locus_tag=AD11_1217 NZ_JJLL01000108.1 Protein Homology CDS 405552 405956 . - 0 ID=cds-WP_033865358.1;Parent=gene-AD11_RS08990;Dbxref=GenBank:WP_033865358.1;Name=WP_033865358.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AD11_RS08990;product=DUF1398 domain-containing protein;protein_id=WP_033865358.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 406177 406908 . - . ID=gene-AD11_RS08995;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AD11_RS08995;old_locus_tag=AD11_1218 NZ_JJLL01000108.1 Protein Homology CDS 406177 406908 . - 0 ID=cds-WP_000332297.1;Parent=gene-AD11_RS08995;Dbxref=GenBank:WP_000332297.1;Name=WP_000332297.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AD11_RS08995;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332297.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 407113 408324 . - . ID=gene-AD11_RS09000;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=protein_coding;locus_tag=AD11_RS09000;old_locus_tag=AD11_1219 NZ_JJLL01000108.1 Protein Homology CDS 407113 408324 . - 0 ID=cds-WP_001299269.1;Parent=gene-AD11_RS09000;Dbxref=GenBank:WP_001299269.1;Name=WP_001299269.1;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AD11_RS09000;product=blue light-responsive regulator BluF;protein_id=WP_001299269.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 408638 408874 . + . ID=gene-AD11_RS09005;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=AD11_RS09005 NZ_JJLL01000108.1 Protein Homology CDS 408638 408874 . + 0 ID=cds-WP_000554144.1;Parent=gene-AD11_RS09005;Dbxref=GenBank:WP_000554144.1;Name=WP_000554144.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AD11_RS09005;product=regulatory protein YcgZ;protein_id=WP_000554144.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 408917 409189 . + . ID=gene-AD11_RS09010;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AD11_RS09010 NZ_JJLL01000108.1 Protein Homology CDS 408917 409189 . + 0 ID=cds-WP_033865359.1;Parent=gene-AD11_RS09010;Dbxref=GenBank:WP_033865359.1;Name=WP_033865359.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AD11_RS09010;product=hypothetical protein;protein_id=WP_033865359.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 409218 409484 . + . ID=gene-AD11_RS09015;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ymgB;locus_tag=AD11_RS09015 NZ_JJLL01000108.1 Protein Homology CDS 409218 409484 . + 0 ID=cds-WP_000888772.1;Parent=gene-AD11_RS09015;Dbxref=GenBank:WP_000888772.1;Name=WP_000888772.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AD11_RS09015;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888772.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 409597 409845 . + . ID=gene-AD11_RS09020;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=AD11_RS09020;old_locus_tag=AD11_1221 NZ_JJLL01000108.1 Protein Homology CDS 409597 409845 . + 0 ID=cds-WP_001065752.1;Parent=gene-AD11_RS09020;Dbxref=GenBank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AD11_RS09020;product=protein YmgC;protein_id=WP_001065752.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 410177 411700 . + . ID=gene-AD11_RS09025;Name=pdeG;gbkey=Gene;gene=pdeG;gene_biotype=protein_coding;locus_tag=AD11_RS09025 NZ_JJLL01000108.1 Protein Homology CDS 410177 411700 . + 0 ID=cds-WP_001416155.1;Parent=gene-AD11_RS09025;Dbxref=GenBank:WP_001416155.1;Name=WP_001416155.1;gbkey=CDS;gene=pdeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AD11_RS09025;product=EAL domain-containing protein;protein_id=WP_001416155.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 411832 412050 . + . ID=gene-AD11_RS09030;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=AD11_RS09030;old_locus_tag=AD11_1223 NZ_JJLL01000108.1 Protein Homology CDS 411832 412050 . + 0 ID=cds-WP_001065861.1;Parent=gene-AD11_RS09030;Dbxref=GenBank:WP_001065861.1;Name=WP_001065861.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ymgF;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AD11_RS09030;product=cell division-associated protein YmgF;protein_id=WP_001065861.1;transl_table=11 NZ_JJLL01000108.1 RefSeq pseudogene 412450 415097 . + . ID=gene-AD11_RS32040;Name=ycgH;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AD11_RS32040;pseudo=true NZ_JJLL01000108.1 Protein Homology CDS 412450 415097 . + 0 ID=cds-AD11_RS32040;Parent=gene-AD11_RS32040;Note=frameshifted%3B internal stop;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AD11_RS32040;product=autotransporter YcgH;pseudo=true;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 415154 415489 . - . ID=gene-AD11_RS09050;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AD11_RS09050;old_locus_tag=AD11_1228 NZ_JJLL01000108.1 Protein Homology CDS 415154 415489 . - 0 ID=cds-WP_000979977.1;Parent=gene-AD11_RS09050;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AD11_RS09050;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 415493 415837 . - . ID=gene-AD11_RS09055;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AD11_RS09055;old_locus_tag=AD11_1229 NZ_JJLL01000108.1 Protein Homology CDS 415493 415837 . - 0 ID=cds-WP_000726974.1;Parent=gene-AD11_RS09055;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AD11_RS09055;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 415839 416012 . - . ID=gene-AD11_RS09060;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AD11_RS09060;old_locus_tag=AD11_1230 NZ_JJLL01000108.1 Protein Homology CDS 415839 416012 . - 0 ID=cds-WP_000122462.1;Parent=gene-AD11_RS09060;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AD11_RS09060;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 416113 416298 . + . ID=gene-AD11_RS28825;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AD11_RS28825 NZ_JJLL01000108.1 Protein Homology CDS 416113 416298 . + 0 ID=cds-WP_001325743.1;Parent=gene-AD11_RS28825;Dbxref=GenBank:WP_001325743.1;Name=WP_001325743.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AD11_RS28825;product=protein YmgJ;protein_id=WP_001325743.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 416259 416378 . + . ID=gene-AD11_RS31495;Name=AD11_RS31495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31495;old_locus_tag=AD11_1231 NZ_JJLL01000108.1 Protein Homology CDS 416259 416378 . + 0 ID=cds-WP_001131446.1;Parent=gene-AD11_RS31495;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AD11_RS31495;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JJLL01000108.1 RefSeq pseudogene 416413 416756 . + . ID=gene-AD11_RS30610;Name=AD11_RS30610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30610;partial=true;pseudo=true;start_range=.,416413 NZ_JJLL01000108.1 Protein Homology CDS 416413 416756 . + 0 ID=cds-AD11_RS30610;Parent=gene-AD11_RS30610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AD11_RS30610;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,416413;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 417128 417394 . - . ID=gene-AD11_RS09070;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AD11_RS09070;old_locus_tag=AD11_1233 NZ_JJLL01000108.1 Protein Homology CDS 417128 417394 . - 0 ID=cds-WP_001185665.1;Parent=gene-AD11_RS09070;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AD11_RS09070;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 417398 418210 . - . ID=gene-AD11_RS09075;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AD11_RS09075;old_locus_tag=AD11_1234 NZ_JJLL01000108.1 Protein Homology CDS 417398 418210 . - 0 ID=cds-WP_000101055.1;Parent=gene-AD11_RS09075;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AD11_RS09075;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 418234 418929 . - . ID=gene-AD11_RS09080;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AD11_RS09080;old_locus_tag=AD11_1235 NZ_JJLL01000108.1 Protein Homology CDS 418234 418929 . - 0 ID=cds-WP_000072536.1;Parent=gene-AD11_RS09080;Dbxref=GenBank:WP_000072536.1;Name=WP_000072536.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=AD11_RS09080;product=septum site-determining protein MinC;protein_id=WP_000072536.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 419449 419817 . + . ID=gene-AD11_RS09085;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AD11_RS09085;old_locus_tag=AD11_1236 NZ_JJLL01000108.1 Protein Homology CDS 419449 419817 . + 0 ID=cds-WP_001056840.1;Parent=gene-AD11_RS09085;Dbxref=GenBank:WP_001056840.1;Name=WP_001056840.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415695.1;locus_tag=AD11_RS09085;product=YcgJ family protein;protein_id=WP_001056840.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 419920 420321 . - . ID=gene-AD11_RS09090;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AD11_RS09090;old_locus_tag=AD11_1237 NZ_JJLL01000108.1 Protein Homology CDS 419920 420321 . - 0 ID=cds-WP_000695218.1;Parent=gene-AD11_RS09090;Dbxref=GenBank:WP_000695218.1;Name=WP_000695218.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309699.1;locus_tag=AD11_RS09090;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695218.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 420563 420856 . + . ID=gene-AD11_RS09100;Name=AD11_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09100;old_locus_tag=AD11_1238 NZ_JJLL01000108.1 Protein Homology CDS 420563 420856 . + 0 ID=cds-WP_001297679.1;Parent=gene-AD11_RS09100;Dbxref=GenBank:WP_001297679.1;Name=WP_001297679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AD11_RS09100;product=YcgL domain-containing protein;protein_id=WP_001297679.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 420928 421587 . + . ID=gene-AD11_RS09105;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AD11_RS09105;old_locus_tag=AD11_1239 NZ_JJLL01000108.1 Protein Homology CDS 420928 421587 . + 0 ID=cds-WP_000284277.1;Parent=gene-AD11_RS09105;Dbxref=GenBank:WP_000284277.1;Name=WP_000284277.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=AD11_RS09105;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284277.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 421679 422125 . + . ID=gene-AD11_RS09110;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AD11_RS09110;old_locus_tag=AD11_1240 NZ_JJLL01000108.1 Protein Homology CDS 421679 422125 . + 0 ID=cds-WP_001306825.1;Parent=gene-AD11_RS09110;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AD11_RS09110;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11 NZ_JJLL01000108.1 RefSeq pseudogene 422332 422484 . - . ID=gene-AD11_RS09115;Name=AD11_RS09115;end_range=422484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09115;old_locus_tag=AD11_1241;partial=true;pseudo=true NZ_JJLL01000108.1 Protein Homology CDS 422332 422484 . - 0 ID=cds-AD11_RS09115;Parent=gene-AD11_RS09115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044179;end_range=422484,.;gbkey=CDS;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AD11_RS09115;partial=true;product=hemolysin E;pseudo=true;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 422501 423198 . - . ID=gene-AD11_RS09120;Name=AD11_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09120;old_locus_tag=AD11_1242 NZ_JJLL01000108.1 Protein Homology CDS 422949 423198 . - 0 ID=cds-WP_103215986.1;Parent=gene-AD11_RS09120;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS09120;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11 NZ_JJLL01000108.1 Protein Homology CDS 422501 422949 . - 2 ID=cds-WP_103215986.1;Parent=gene-AD11_RS09120;Dbxref=GenBank:WP_103215986.1;Name=WP_103215986.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS09120;product=IS1-like element IS1A family transposase;protein_id=WP_103215986.1;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 423265 423831 . + . ID=gene-AD11_RS28855;Name=AD11_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS28855 NZ_JJLL01000108.1 Protein Homology CDS 423265 423831 . + 0 ID=cds-WP_000533792.1;Parent=gene-AD11_RS28855;Dbxref=GenBank:WP_000533792.1;Name=WP_000533792.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009107.1;locus_tag=AD11_RS28855;product=ankyrin repeat domain-containing protein;protein_id=WP_000533792.1;transl_table=11 NZ_JJLL01000108.1 RefSeq pseudogene 424037 425548 . + . ID=gene-AD11_RS09130;Name=AD11_RS09130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09130;old_locus_tag=AD11_1244;partial=true;pseudo=true;start_range=.,424037 NZ_JJLL01000108.1 Protein Homology CDS 424037 425548 . + 0 ID=cds-AD11_RS09130;Parent=gene-AD11_RS09130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244282.1;locus_tag=AD11_RS09130;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,424037;transl_table=11 NZ_JJLL01000108.1 RefSeq gene 425560 426009 . + . ID=gene-AD11_RS09135;Name=AD11_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09135;old_locus_tag=AD11_1245 NZ_JJLL01000108.1 Protein Homology CDS 425560 426009 . + 0 ID=cds-WP_000978828.1;Parent=gene-AD11_RS09135;Dbxref=GenBank:WP_000978828.1;Name=WP_000978828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978828.1;locus_tag=AD11_RS09135;product=RHS element protein dsORF-h1;protein_id=WP_000978828.1;transl_table=11 NZ_JJLL01000108.1 RefSeq pseudogene 426270 426822 . + . ID=gene-AD11_RS09140;Name=AD11_RS09140;end_range=426822,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09140;old_locus_tag=AD11_1246;partial=true;pseudo=true NZ_JJLL01000108.1 Protein Homology CDS 426270 426822 . + 0 ID=cds-AD11_RS09140;Parent=gene-AD11_RS09140;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=426822,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS09140;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000109.1 1 2879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000109.1 RefSeq region 1 2879 . + . ID=NZ_JJLL01000109.1:1..2879;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000109.1 RefSeq gene 11 1173 . + . ID=gene-AD11_RS09150;Name=AD11_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09150;old_locus_tag=AD11_1248 NZ_JJLL01000109.1 Protein Homology CDS 11 272 . + 0 ID=cds-WP_148724997.1;Parent=gene-AD11_RS09150;Dbxref=GenBank:WP_148724997.1;Name=WP_148724997.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS09150;product=IS3-like element IS3 family transposase;protein_id=WP_148724997.1;transl_table=11 NZ_JJLL01000109.1 Protein Homology CDS 272 1173 . + 2 ID=cds-WP_148724997.1;Parent=gene-AD11_RS09150;Dbxref=GenBank:WP_148724997.1;Name=WP_148724997.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS09150;product=IS3-like element IS3 family transposase;protein_id=WP_148724997.1;transl_table=11 NZ_JJLL01000109.1 RefSeq pseudogene 1204 1466 . + . ID=gene-AD11_RS28860;Name=AD11_RS28860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28860;partial=true;pseudo=true;start_range=.,1204 NZ_JJLL01000109.1 Protein Homology CDS 1204 1466 . + 0 ID=cds-AD11_RS28860;Parent=gene-AD11_RS28860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843781.1;locus_tag=AD11_RS28860;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,1204;transl_table=11 NZ_JJLL01000109.1 RefSeq gene 1606 1806 . - . ID=gene-AD11_RS31500;Name=AD11_RS31500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31500 NZ_JJLL01000109.1 Protein Homology CDS 1606 1806 . - 0 ID=cds-WP_148724998.1;Parent=gene-AD11_RS31500;Dbxref=GenBank:WP_148724998.1;Name=WP_148724998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033650.1;locus_tag=AD11_RS31500;product=ANR family transcriptional regulator;protein_id=WP_148724998.1;transl_table=11 NZ_JJLL01000109.1 RefSeq gene 2155 2852 . - . ID=gene-AD11_RS09155;Name=AD11_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09155;old_locus_tag=AD11_1249 NZ_JJLL01000109.1 Protein Homology CDS 2603 2852 . - 0 ID=cds-WP_094096600.1;Parent=gene-AD11_RS09155;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS09155;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JJLL01000109.1 Protein Homology CDS 2155 2603 . - 2 ID=cds-WP_094096600.1;Parent=gene-AD11_RS09155;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS09155;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 ##sequence-region NZ_JJLL01000110.1 1 93826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000110.1 RefSeq region 1 93826 . + . ID=NZ_JJLL01000110.1:1..93826;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000110.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS09160;Name=AD11_RS09160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09160;old_locus_tag=AD11_1250;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000110.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS09160;Parent=gene-AD11_RS09160;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS09160;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000110.1 RefSeq pseudogene 638 1395 . - . ID=gene-AD11_RS09170;Name=AD11_RS09170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09170;old_locus_tag=AD11_1252;partial=true;pseudo=true;start_range=.,638 NZ_JJLL01000110.1 Protein Homology CDS 638 1395 . - 0 ID=cds-AD11_RS09170;Parent=gene-AD11_RS09170;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0044179;gbkey=CDS;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AD11_RS09170;partial=true;product=hemolysin E;pseudo=true;start_range=.,638;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 1768 2187 . + . ID=gene-AD11_RS09175;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AD11_RS09175;old_locus_tag=AD11_1253 NZ_JJLL01000110.1 Protein Homology CDS 1768 2187 . + 0 ID=cds-WP_000897378.1;Parent=gene-AD11_RS09175;Dbxref=GenBank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AD11_RS09175;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 2187 3455 . + . ID=gene-AD11_RS09180;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AD11_RS09180;old_locus_tag=AD11_1254 NZ_JJLL01000110.1 Protein Homology CDS 2187 3455 . + 0 ID=cds-WP_000457616.1;Parent=gene-AD11_RS09180;Dbxref=GenBank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AD11_RS09180;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 3501 4031 . - . ID=gene-AD11_RS09185;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AD11_RS09185;old_locus_tag=AD11_1255 NZ_JJLL01000110.1 Protein Homology CDS 3501 4031 . - 0 ID=cds-WP_000943459.1;Parent=gene-AD11_RS09185;Dbxref=GenBank:WP_000943459.1;Name=WP_000943459.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=AD11_RS09185;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 4177 5718 . - . ID=gene-AD11_RS09190;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AD11_RS09190;old_locus_tag=AD11_1256 NZ_JJLL01000110.1 Protein Homology CDS 4177 5718 . - 0 ID=cds-WP_000406391.1;Parent=gene-AD11_RS09190;Dbxref=GenBank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AD11_RS09190;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 5939 6658 . + . ID=gene-AD11_RS09195;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AD11_RS09195;old_locus_tag=AD11_1257 NZ_JJLL01000110.1 Protein Homology CDS 5939 6658 . + 0 ID=cds-WP_000234823.1;Parent=gene-AD11_RS09195;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AD11_RS09195;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 6710 8242 . - . ID=gene-AD11_RS09200;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AD11_RS09200;old_locus_tag=AD11_1258 NZ_JJLL01000110.1 Protein Homology CDS 6710 8242 . - 0 ID=cds-WP_000190854.1;Parent=gene-AD11_RS09200;Dbxref=GenBank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415706.1;locus_tag=AD11_RS09200;product=SpoVR family protein;protein_id=WP_000190854.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 8572 9870 . + . ID=gene-AD11_RS09205;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AD11_RS09205;old_locus_tag=AD11_1259 NZ_JJLL01000110.1 Protein Homology CDS 8572 9870 . + 0 ID=cds-WP_001266908.1;Parent=gene-AD11_RS09205;Dbxref=GenBank:WP_001266908.1;Name=WP_001266908.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AD11_RS09205;product=D-amino acid dehydrogenase;protein_id=WP_001266908.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 9880 10950 . + . ID=gene-AD11_RS09210;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AD11_RS09210;old_locus_tag=AD11_1260 NZ_JJLL01000110.1 Protein Homology CDS 9880 10950 . + 0 ID=cds-WP_000197881.1;Parent=gene-AD11_RS09210;Dbxref=GenBank:WP_000197881.1;Name=WP_000197881.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415708.1;locus_tag=AD11_RS09210;product=catabolic alanine racemase DadX;protein_id=WP_000197881.1;transl_table=11 NZ_JJLL01000110.1 RefSeq pseudogene 11261 11401 . + . ID=gene-AD11_RS33160;Name=AD11_RS33160;end_range=11401,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33160;partial=true;pseudo=true NZ_JJLL01000110.1 Protein Homology CDS 11261 11401 . + 0 ID=cds-AD11_RS33160;Parent=gene-AD11_RS33160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11401,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AD11_RS33160;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 11336 13072 . - . ID=gene-AD11_RS09215;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=AD11_RS09215;old_locus_tag=AD11_1262 NZ_JJLL01000110.1 Protein Homology CDS 11336 13072 . - 0 ID=cds-WP_000340194.1;Parent=gene-AD11_RS09215;Dbxref=GenBank:WP_000340194.1;Name=WP_000340194.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415709.2;locus_tag=AD11_RS09215;product=potassium/proton antiporter;protein_id=WP_000340194.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 13167 14081 . - . ID=gene-AD11_RS09220;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AD11_RS09220;old_locus_tag=AD11_1263 NZ_JJLL01000110.1 Protein Homology CDS 13167 14081 . - 0 ID=cds-WP_000051560.1;Parent=gene-AD11_RS09220;Dbxref=GenBank:WP_000051560.1;Name=WP_000051560.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AD11_RS09220;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051560.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 14181 14792 . + . ID=gene-AD11_RS09225;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AD11_RS09225;old_locus_tag=AD11_1264 NZ_JJLL01000110.1 Protein Homology CDS 14181 14792 . + 0 ID=cds-WP_001301104.1;Parent=gene-AD11_RS09225;Dbxref=GenBank:WP_001301104.1;Name=WP_001301104.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415711.2;locus_tag=AD11_RS09225;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001301104.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 14794 15528 . - . ID=gene-AD11_RS09230;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AD11_RS09230;old_locus_tag=AD11_1265 NZ_JJLL01000110.1 Protein Homology CDS 14794 15528 . - 0 ID=cds-WP_000020169.1;Parent=gene-AD11_RS09230;Dbxref=GenBank:WP_000020169.1;Name=WP_000020169.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AD11_RS09230;product=flagellar brake protein YcgR;protein_id=WP_000020169.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 15729 15983 . + . ID=gene-AD11_RS09235;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AD11_RS09235;old_locus_tag=AD11_1266 NZ_JJLL01000110.1 Protein Homology CDS 15729 15983 . + 0 ID=cds-WP_001310727.1;Parent=gene-AD11_RS09235;Dbxref=GenBank:WP_001310727.1;Name=WP_001310727.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415713.1;locus_tag=AD11_RS09235;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_001310727.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 16161 16601 . + . ID=gene-AD11_RS09240;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=AD11_RS09240;old_locus_tag=AD11_1267 NZ_JJLL01000110.1 Protein Homology CDS 16161 16601 . + 0 ID=cds-WP_000615067.1;Parent=gene-AD11_RS09240;Dbxref=GenBank:WP_000615067.1;Name=WP_000615067.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=AD11_RS09240;product=protein YcgY;protein_id=WP_000615067.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 16680 18377 . - . ID=gene-AD11_RS09245;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AD11_RS09245;old_locus_tag=AD11_1268 NZ_JJLL01000110.1 Protein Homology CDS 16680 18377 . - 0 ID=cds-WP_000841714.1;Parent=gene-AD11_RS09245;Dbxref=GenBank:WP_000841714.1;Name=WP_000841714.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AD11_RS09245;product=alpha%2Calpha-trehalase;protein_id=WP_000841714.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 18697 20115 . - . ID=gene-AD11_RS09250;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AD11_RS09250;old_locus_tag=AD11_1270 NZ_JJLL01000110.1 Protein Homology CDS 18697 20115 . - 0 ID=cds-WP_001301101.1;Parent=gene-AD11_RS09250;Dbxref=GenBank:WP_001301101.1;Name=WP_001301101.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AD11_RS09250;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001301101.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 20126 20758 . - . ID=gene-AD11_RS09255;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AD11_RS09255;old_locus_tag=AD11_1271 NZ_JJLL01000110.1 Protein Homology CDS 20126 20758 . - 0 ID=cds-WP_000059411.1;Parent=gene-AD11_RS09255;Dbxref=GenBank:WP_000059411.1;Name=WP_000059411.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AD11_RS09255;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000059411.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 20769 21839 . - . ID=gene-AD11_RS09260;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AD11_RS09260;old_locus_tag=AD11_1272 NZ_JJLL01000110.1 Protein Homology CDS 20769 21839 . - 0 ID=cds-WP_000733715.1;Parent=gene-AD11_RS09260;Dbxref=GenBank:WP_000733715.1;Name=WP_000733715.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AD11_RS09260;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733715.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 22067 23986 . + . ID=gene-AD11_RS09265;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AD11_RS09265;old_locus_tag=AD11_1273 NZ_JJLL01000110.1 Protein Homology CDS 22067 23986 . + 0 ID=cds-WP_001350505.1;Parent=gene-AD11_RS09265;Dbxref=GenBank:WP_001350505.1;Name=WP_001350505.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AD11_RS09265;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_001350505.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 24086 26953 . - . ID=gene-AD11_RS09270;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=protein_coding;locus_tag=AD11_RS09270;old_locus_tag=AD11_1274 NZ_JJLL01000110.1 Protein Homology CDS 24086 26953 . - 0 ID=cds-WP_001334788.1;Parent=gene-AD11_RS09270;Dbxref=GenBank:WP_001334788.1;Name=WP_001334788.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ycgV;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AD11_RS09270;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001334788.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 27722 28813 . - . ID=gene-AD11_RS09280;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AD11_RS09280;old_locus_tag=AD11_1276 NZ_JJLL01000110.1 Protein Homology CDS 27722 28813 . - 0 ID=cds-WP_000505866.1;Parent=gene-AD11_RS09280;Dbxref=GenBank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AD11_RS09280;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 28930 29514 . - . ID=gene-AD11_RS09285;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AD11_RS09285;old_locus_tag=AD11_1277 NZ_JJLL01000110.1 Protein Homology CDS 28930 29514 . - 0 ID=cds-WP_000152933.1;Parent=gene-AD11_RS09285;Dbxref=GenBank:WP_000152933.1;Name=WP_000152933.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AD11_RS09285;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 29792 30070 . + . ID=gene-AD11_RS09290;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AD11_RS09290;old_locus_tag=AD11_1278 NZ_JJLL01000110.1 Protein Homology CDS 29792 30070 . + 0 ID=cds-WP_000823885.1;Parent=gene-AD11_RS09290;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AD11_RS09290;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 30125 31804 . - . ID=gene-AD11_RS09295;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AD11_RS09295;old_locus_tag=AD11_1279 NZ_JJLL01000110.1 Protein Homology CDS 30125 31804 . - 0 ID=cds-WP_001033352.1;Parent=gene-AD11_RS09295;Dbxref=GenBank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AD11_RS09295;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 31929 32876 . - . ID=gene-AD11_RS09300;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AD11_RS09300;old_locus_tag=AD11_1280 NZ_JJLL01000110.1 Protein Homology CDS 31929 32876 . - 0 ID=cds-WP_001298109.1;Parent=gene-AD11_RS09300;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AD11_RS09300;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 33027 33878 . - . ID=gene-AD11_RS09305;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AD11_RS09305;old_locus_tag=AD11_1281 NZ_JJLL01000110.1 Protein Homology CDS 33027 33878 . - 0 ID=cds-WP_001260332.1;Parent=gene-AD11_RS09305;Dbxref=GenBank:WP_001260332.1;Name=WP_001260332.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309740.1;locus_tag=AD11_RS09305;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260332.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 33878 34501 . - . ID=gene-AD11_RS09310;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AD11_RS09310;old_locus_tag=AD11_1282 NZ_JJLL01000110.1 Protein Homology CDS 33878 34501 . - 0 ID=cds-WP_001130692.1;Parent=gene-AD11_RS09310;Dbxref=GenBank:WP_001130692.1;Name=WP_001130692.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AD11_RS09310;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_001130692.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 34715 35971 . + . ID=gene-AD11_RS09315;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AD11_RS09315;old_locus_tag=AD11_1283 NZ_JJLL01000110.1 Protein Homology CDS 34715 35971 . + 0 ID=cds-WP_001299679.1;Parent=gene-AD11_RS09315;Dbxref=GenBank:WP_001299679.1;Name=WP_001299679.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AD11_RS09315;product=glutamyl-tRNA reductase;protein_id=WP_001299679.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 36013 37095 . + . ID=gene-AD11_RS09320;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AD11_RS09320;old_locus_tag=AD11_1284 NZ_JJLL01000110.1 Protein Homology CDS 36013 37095 . + 0 ID=cds-WP_000804726.1;Parent=gene-AD11_RS09320;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AD11_RS09320;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 37095 37928 . + . ID=gene-AD11_RS09325;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AD11_RS09325;old_locus_tag=AD11_1285 NZ_JJLL01000110.1 Protein Homology CDS 37095 37928 . + 0 ID=cds-WP_000456467.1;Parent=gene-AD11_RS09325;Dbxref=GenBank:WP_000456467.1;Name=WP_000456467.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415730.1;locus_tag=AD11_RS09325;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456467.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 37925 38317 . + . ID=gene-AD11_RS09330;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AD11_RS09330;old_locus_tag=AD11_1286 NZ_JJLL01000110.1 Protein Homology CDS 37925 38317 . + 0 ID=cds-WP_000200374.1;Parent=gene-AD11_RS09330;Dbxref=GenBank:WP_000200374.1;Name=WP_000200374.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415731.1;locus_tag=AD11_RS09330;product=invasion regulator SirB2;protein_id=WP_000200374.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 38321 39130 . + . ID=gene-AD11_RS09335;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AD11_RS09335;old_locus_tag=AD11_1287 NZ_JJLL01000110.1 Protein Homology CDS 38321 39130 . + 0 ID=cds-WP_001257044.1;Parent=gene-AD11_RS09335;Dbxref=GenBank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AD11_RS09335;product=invasion regulator SirB1;protein_id=WP_001257044.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 39166 40020 . + . ID=gene-AD11_RS09340;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AD11_RS09340;old_locus_tag=AD11_1288 NZ_JJLL01000110.1 Protein Homology CDS 39166 40020 . + 0 ID=cds-WP_000811065.1;Parent=gene-AD11_RS09340;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AD11_RS09340;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 40169 40276 . - . ID=gene-AD11_RS09345;Name=AD11_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09345;old_locus_tag=AD11_1289 NZ_JJLL01000110.1 Protein Homology CDS 40169 40276 . - 0 ID=cds-WP_000170955.1;Parent=gene-AD11_RS09345;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AD11_RS09345;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 40704 40811 . - . ID=gene-AD11_RS09350;Name=AD11_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09350;old_locus_tag=AD11_1290 NZ_JJLL01000110.1 Protein Homology CDS 40704 40811 . - 0 ID=cds-WP_000170963.1;Parent=gene-AD11_RS09350;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AD11_RS09350;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 41239 41346 . - . ID=gene-AD11_RS09355;Name=AD11_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09355;old_locus_tag=AD11_1291 NZ_JJLL01000110.1 Protein Homology CDS 41239 41346 . - 0 ID=cds-WP_000170955.1-2;Parent=gene-AD11_RS09355;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AD11_RS09355;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 41750 42850 . - . ID=gene-AD11_RS09360;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AD11_RS09360;old_locus_tag=AD11_1292 NZ_JJLL01000110.1 Protein Homology CDS 41750 42850 . - 0 ID=cds-WP_000063607.1;Parent=gene-AD11_RS09360;Dbxref=GenBank:WP_000063607.1;Name=WP_000063607.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415734.1;locus_tag=AD11_RS09360;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_000063607.1;transl_table=11 NZ_JJLL01000110.1 RefSeq pseudogene 43120 43349 . + . ID=gene-AD11_RS09365;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=pseudogene;locus_tag=AD11_RS09365;old_locus_tag=AD11_1293;pseudo=true NZ_JJLL01000110.1 Protein Homology CDS 43120 43349 . + 0 ID=cds-AD11_RS09365;Parent=gene-AD11_RS09365;Note=frameshifted;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AD11_RS09365;product=putative cation transport regulator ChaB;pseudo=true;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 43507 44202 . + . ID=gene-AD11_RS09370;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AD11_RS09370;old_locus_tag=AD11_1294 NZ_JJLL01000110.1 Protein Homology CDS 43507 44202 . + 0 ID=cds-WP_001336325.1;Parent=gene-AD11_RS09370;Dbxref=GenBank:WP_001336325.1;Name=WP_001336325.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AD11_RS09370;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001336325.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 44246 44599 . - . ID=gene-AD11_RS09375;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AD11_RS09375;old_locus_tag=AD11_1295 NZ_JJLL01000110.1 Protein Homology CDS 44246 44599 . - 0 ID=cds-WP_001169669.1;Parent=gene-AD11_RS09375;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AD11_RS09375;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 44784 46178 . + . ID=gene-AD11_RS09380;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AD11_RS09380;old_locus_tag=AD11_1296 NZ_JJLL01000110.1 Protein Homology CDS 44784 46178 . + 0 ID=cds-WP_000086217.1;Parent=gene-AD11_RS09380;Dbxref=GenBank:WP_000086217.1;Name=WP_000086217.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AD11_RS09380;product=inverse autotransporter invasin YchO;protein_id=WP_000086217.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 46179 46829 . - . ID=gene-AD11_RS09385;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AD11_RS09385;old_locus_tag=AD11_1297 NZ_JJLL01000110.1 Protein Homology CDS 46179 46829 . - 0 ID=cds-WP_000070491.1;Parent=gene-AD11_RS09385;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AD11_RS09385;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 46822 48618 . - . ID=gene-AD11_RS09390;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AD11_RS09390;old_locus_tag=AD11_1298 NZ_JJLL01000110.1 Protein Homology CDS 46822 48618 . - 0 ID=cds-WP_000918073.1;Parent=gene-AD11_RS09390;Dbxref=GenBank:WP_000918073.1;Name=WP_000918073.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AD11_RS09390;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000918073.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 48957 50348 . + . ID=gene-AD11_RS09400;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AD11_RS09400;old_locus_tag=AD11_1300 NZ_JJLL01000110.1 Protein Homology CDS 48957 50348 . + 0 ID=cds-WP_000019827.1;Parent=gene-AD11_RS09400;Dbxref=GenBank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AD11_RS09400;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 50864 54607 . + . ID=gene-AD11_RS09405;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AD11_RS09405;old_locus_tag=AD11_1301 NZ_JJLL01000110.1 Protein Homology CDS 50864 54607 . + 0 ID=cds-WP_033865361.1;Parent=gene-AD11_RS09405;Dbxref=GenBank:WP_033865361.1;Name=WP_033865361.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415742.1;locus_tag=AD11_RS09405;product=nitrate reductase subunit alpha;protein_id=WP_033865361.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 54604 56142 . + . ID=gene-AD11_RS09410;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AD11_RS09410;old_locus_tag=AD11_1302 NZ_JJLL01000110.1 Protein Homology CDS 54604 56142 . + 0 ID=cds-WP_000702660.1;Parent=gene-AD11_RS09410;Dbxref=GenBank:WP_000702660.1;Name=WP_000702660.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309757.1;locus_tag=AD11_RS09410;product=nitrate reductase subunit beta;protein_id=WP_000702660.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 56139 56849 . + . ID=gene-AD11_RS09415;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AD11_RS09415;old_locus_tag=AD11_1303 NZ_JJLL01000110.1 Protein Homology CDS 56139 56849 . + 0 ID=cds-WP_000571699.1;Parent=gene-AD11_RS09415;Dbxref=GenBank:WP_000571699.1;Name=WP_000571699.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707135.1;locus_tag=AD11_RS09415;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571699.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 56849 57526 . + . ID=gene-AD11_RS09420;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AD11_RS09420;old_locus_tag=AD11_1304 NZ_JJLL01000110.1 Protein Homology CDS 56849 57526 . + 0 ID=cds-WP_001160110.1;Parent=gene-AD11_RS09420;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AD11_RS09420;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 57710 57841 . - . ID=gene-AD11_RS27435;Name=AD11_RS27435;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27435 NZ_JJLL01000110.1 cmsearch ncRNA 57710 57841 . - . ID=rna-AD11_RS27435;Parent=gene-AD11_RS27435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27435;product=RtT sRNA NZ_JJLL01000110.1 cmsearch exon 57710 57841 . - . ID=exon-AD11_RS27435-1;Parent=rna-AD11_RS27435;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27435;product=RtT sRNA NZ_JJLL01000110.1 RefSeq gene 57888 58019 . - . ID=gene-AD11_RS27440;Name=AD11_RS27440;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27440 NZ_JJLL01000110.1 cmsearch ncRNA 57888 58019 . - . ID=rna-AD11_RS27440;Parent=gene-AD11_RS27440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27440;product=RtT sRNA NZ_JJLL01000110.1 cmsearch exon 57888 58019 . - . ID=exon-AD11_RS27440-1;Parent=rna-AD11_RS27440;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27440;product=RtT sRNA NZ_JJLL01000110.1 RefSeq gene 58066 58150 . - . ID=gene-AD11_RS09430;Name=AD11_RS09430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS09430;old_locus_tag=AD11_1305 NZ_JJLL01000110.1 tRNAscan-SE tRNA 58066 58150 . - . ID=rna-AD11_RS09430;Parent=gene-AD11_RS09430;anticodon=(pos:complement(58114..58116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS09430;product=tRNA-Tyr NZ_JJLL01000110.1 tRNAscan-SE exon 58066 58150 . - . ID=exon-AD11_RS09430-1;Parent=rna-AD11_RS09430;anticodon=(pos:complement(58114..58116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS09430;product=tRNA-Tyr NZ_JJLL01000110.1 RefSeq gene 58185 58316 . - . ID=gene-AD11_RS27445;Name=AD11_RS27445;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27445 NZ_JJLL01000110.1 cmsearch ncRNA 58185 58316 . - . ID=rna-AD11_RS27445;Parent=gene-AD11_RS27445;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27445;product=RtT sRNA NZ_JJLL01000110.1 cmsearch exon 58185 58316 . - . ID=exon-AD11_RS27445-1;Parent=rna-AD11_RS27445;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27445;product=RtT sRNA NZ_JJLL01000110.1 RefSeq gene 58360 58491 . - . ID=gene-AD11_RS27450;Name=AD11_RS27450;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27450 NZ_JJLL01000110.1 cmsearch ncRNA 58360 58491 . - . ID=rna-AD11_RS27450;Parent=gene-AD11_RS27450;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27450;product=RtT sRNA NZ_JJLL01000110.1 cmsearch exon 58360 58491 . - . ID=exon-AD11_RS27450-1;Parent=rna-AD11_RS27450;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27450;product=RtT sRNA NZ_JJLL01000110.1 RefSeq gene 58535 58666 . - . ID=gene-AD11_RS27455;Name=AD11_RS27455;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27455 NZ_JJLL01000110.1 cmsearch ncRNA 58535 58666 . - . ID=rna-AD11_RS27455;Parent=gene-AD11_RS27455;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27455;product=RtT sRNA NZ_JJLL01000110.1 cmsearch exon 58535 58666 . - . ID=exon-AD11_RS27455-1;Parent=rna-AD11_RS27455;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27455;product=RtT sRNA NZ_JJLL01000110.1 RefSeq gene 58710 58794 . - . ID=gene-AD11_RS09435;Name=AD11_RS09435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS09435;old_locus_tag=AD11_1306 NZ_JJLL01000110.1 tRNAscan-SE tRNA 58710 58794 . - . ID=rna-AD11_RS09435;Parent=gene-AD11_RS09435;anticodon=(pos:complement(58758..58760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS09435;product=tRNA-Tyr NZ_JJLL01000110.1 tRNAscan-SE exon 58710 58794 . - . ID=exon-AD11_RS09435-1;Parent=rna-AD11_RS09435;anticodon=(pos:complement(58758..58760));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS09435;product=tRNA-Tyr NZ_JJLL01000110.1 RefSeq gene 58954 59796 . - . ID=gene-AD11_RS09440;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AD11_RS09440;old_locus_tag=AD11_1307 NZ_JJLL01000110.1 Protein Homology CDS 58954 59796 . - 0 ID=cds-WP_000555857.1;Parent=gene-AD11_RS09440;Dbxref=GenBank:WP_000555857.1;Name=WP_000555857.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415748.1;locus_tag=AD11_RS09440;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 59846 60304 . - . ID=gene-AD11_RS09445;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AD11_RS09445;old_locus_tag=AD11_1308 NZ_JJLL01000110.1 Protein Homology CDS 59846 60304 . - 0 ID=cds-WP_001307143.1;Parent=gene-AD11_RS09445;Dbxref=GenBank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AD11_RS09445;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 60417 61322 . + . ID=gene-AD11_RS09450;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AD11_RS09450;old_locus_tag=AD11_1309 NZ_JJLL01000110.1 Protein Homology CDS 60417 61322 . + 0 ID=cds-WP_001295622.1;Parent=gene-AD11_RS09450;Dbxref=GenBank:WP_001295622.1;Name=WP_001295622.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AD11_RS09450;product=patatin-like phospholipase RssA;protein_id=WP_001295622.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 61414 62427 . + . ID=gene-AD11_RS09455;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AD11_RS09455;old_locus_tag=AD11_1310 NZ_JJLL01000110.1 Protein Homology CDS 61414 62427 . + 0 ID=cds-WP_000193447.1;Parent=gene-AD11_RS09455;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AD11_RS09455;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 62629 63537 . + . ID=gene-AD11_RS09460;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AD11_RS09460;old_locus_tag=AD11_1311 NZ_JJLL01000110.1 Protein Homology CDS 62629 63537 . + 0 ID=cds-WP_000718995.1;Parent=gene-AD11_RS09460;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AD11_RS09460;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 63681 64094 . - . ID=gene-AD11_RS09465;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AD11_RS09465;old_locus_tag=AD11_1312 NZ_JJLL01000110.1 Protein Homology CDS 63681 64094 . - 0 ID=cds-WP_001287378.1;Parent=gene-AD11_RS09465;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AD11_RS09465;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 64699 65316 . + . ID=gene-AD11_RS09470;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AD11_RS09470;old_locus_tag=AD11_1313 NZ_JJLL01000110.1 Protein Homology CDS 64699 65316 . + 0 ID=cds-WP_000068077.1;Parent=gene-AD11_RS09470;Dbxref=GenBank:WP_000068077.1;Name=WP_000068077.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415754.1;locus_tag=AD11_RS09470;product=thymidine kinase;protein_id=WP_000068077.1;transl_table=11 NZ_JJLL01000110.1 RefSeq pseudogene 65598 66494 . - . ID=gene-AD11_RS09475;Name=AD11_RS09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09475;old_locus_tag=AD11_1314;pseudo=true NZ_JJLL01000110.1 Protein Homology CDS 65598 66494 . - 0 ID=cds-AD11_RS09475;Parent=gene-AD11_RS09475;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AD11_RS09475;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 66618 69293 . - . ID=gene-AD11_RS09485;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AD11_RS09485;old_locus_tag=AD11_1317 NZ_JJLL01000110.1 Protein Homology CDS 66618 69293 . - 0 ID=cds-WP_000301651.1;Parent=gene-AD11_RS09485;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AD11_RS09485;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 69686 69739 . + . ID=gene-AD11_RS32485;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AD11_RS32485 NZ_JJLL01000110.1 Protein Homology CDS 69686 69739 . + 0 ID=cds-WP_211180492.1;Parent=gene-AD11_RS32485;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AD11_RS32485;product=protein YchT;protein_id=WP_211180492.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 69770 70417 . + . ID=gene-AD11_RS09490;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AD11_RS09490;old_locus_tag=AD11_1318 NZ_JJLL01000110.1 Protein Homology CDS 69770 70417 . + 0 ID=cds-WP_000616554.1;Parent=gene-AD11_RS09490;Dbxref=GenBank:WP_000616554.1;Name=WP_000616554.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=AD11_RS09490;product=NAAT family transporter YchE;protein_id=WP_000616554.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 70575 70871 . - . ID=gene-AD11_RS32210;Name=AD11_RS32210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32210 NZ_JJLL01000110.1 GeneMarkS-2+ CDS 70575 70871 . - 0 ID=cds-WP_001211521.1;Parent=gene-AD11_RS32210;Dbxref=GenBank:WP_001211521.1;Name=WP_001211521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32210;product=hypothetical protein;protein_id=WP_001211521.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 71155 72786 . + . ID=gene-AD11_RS09495;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AD11_RS09495;old_locus_tag=AD11_1320 NZ_JJLL01000110.1 Protein Homology CDS 71155 72786 . + 0 ID=cds-WP_001297114.1;Parent=gene-AD11_RS09495;Dbxref=GenBank:WP_001297114.1;Name=WP_001297114.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AD11_RS09495;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001297114.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 72872 73792 . + . ID=gene-AD11_RS09500;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AD11_RS09500;old_locus_tag=AD11_1321 NZ_JJLL01000110.1 Protein Homology CDS 72872 73792 . + 0 ID=cds-WP_000911112.1;Parent=gene-AD11_RS09500;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AD11_RS09500;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 73807 74715 . + . ID=gene-AD11_RS09505;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AD11_RS09505;old_locus_tag=AD11_1322 NZ_JJLL01000110.1 Protein Homology CDS 73807 74715 . + 0 ID=cds-WP_000979661.1;Parent=gene-AD11_RS09505;Dbxref=GenBank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AD11_RS09505;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 74727 75740 . + . ID=gene-AD11_RS09510;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AD11_RS09510;old_locus_tag=AD11_1323 NZ_JJLL01000110.1 Protein Homology CDS 74727 75740 . + 0 ID=cds-WP_000110945.1;Parent=gene-AD11_RS09510;Dbxref=GenBank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AD11_RS09510;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 75737 76741 . + . ID=gene-AD11_RS09515;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AD11_RS09515;old_locus_tag=AD11_1324 NZ_JJLL01000110.1 Protein Homology CDS 75737 76741 . + 0 ID=cds-WP_000994905.1;Parent=gene-AD11_RS09515;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AD11_RS09515;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 76794 77123 . - . ID=gene-AD11_RS09520;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AD11_RS09520;old_locus_tag=AD11_1325 NZ_JJLL01000110.1 Protein Homology CDS 76794 77123 . - 0 ID=cds-WP_000366959.1;Parent=gene-AD11_RS09520;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AD11_RS09520;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 77158 78618 . - . ID=gene-AD11_RS09525;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AD11_RS09525;old_locus_tag=AD11_1326 NZ_JJLL01000110.1 Protein Homology CDS 77158 78618 . - 0 ID=cds-WP_000214516.1;Parent=gene-AD11_RS09525;Dbxref=GenBank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AD11_RS09525;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 78761 78934 . + . ID=gene-AD11_RS31510;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AD11_RS31510 NZ_JJLL01000110.1 Protein Homology CDS 78761 78934 . + 0 ID=cds-WP_001309467.1;Parent=gene-AD11_RS31510;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AD11_RS31510;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 78989 80242 . - . ID=gene-AD11_RS09535;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AD11_RS09535;old_locus_tag=AD11_1327 NZ_JJLL01000110.1 Protein Homology CDS 78989 80242 . - 0 ID=cds-WP_001295624.1;Parent=gene-AD11_RS09535;Dbxref=GenBank:WP_001295624.1;Name=WP_001295624.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415766.1;locus_tag=AD11_RS09535;product=voltage-gated potassium channel protein;protein_id=WP_001295624.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 80542 80838 . - . ID=gene-AD11_RS09540;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AD11_RS09540;old_locus_tag=AD11_1328 NZ_JJLL01000110.1 Protein Homology CDS 80542 80838 . - 0 ID=cds-WP_000967595.1;Parent=gene-AD11_RS09540;Dbxref=GenBank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AD11_RS09540;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 81062 81781 . + . ID=gene-AD11_RS09545;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AD11_RS09545;old_locus_tag=AD11_1329 NZ_JJLL01000110.1 Protein Homology CDS 81062 81781 . + 0 ID=cds-WP_001360141.1;Parent=gene-AD11_RS09545;Dbxref=GenBank:WP_001360141.1;Name=WP_001360141.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AD11_RS09545;product=TonB system transport protein TonB;protein_id=WP_001360141.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 81821 82219 . - . ID=gene-AD11_RS09550;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AD11_RS09550;old_locus_tag=AD11_1330 NZ_JJLL01000110.1 Protein Homology CDS 81821 82219 . - 0 ID=cds-WP_000108160.1;Parent=gene-AD11_RS09550;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AD11_RS09550;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 82324 82863 . - . ID=gene-AD11_RS09555;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AD11_RS09555;old_locus_tag=AD11_1331 NZ_JJLL01000110.1 Protein Homology CDS 82324 82863 . - 0 ID=cds-WP_000808667.1;Parent=gene-AD11_RS09555;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AD11_RS09555;product=septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 82893 83636 . - . ID=gene-AD11_RS09560;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AD11_RS09560;old_locus_tag=AD11_1332 NZ_JJLL01000110.1 Protein Homology CDS 82893 83636 . - 0 ID=cds-WP_001619373.1;Parent=gene-AD11_RS09560;Dbxref=GenBank:WP_001619373.1;Name=WP_001619373.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AD11_RS09560;product=YciC family protein;protein_id=WP_001619373.1;transl_table=11 NZ_JJLL01000110.1 RefSeq pseudogene 83664 83753 . - . ID=gene-AD11_RS31515;Name=AD11_RS31515;end_range=83753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31515;partial=true;pseudo=true NZ_JJLL01000110.1 Protein Homology CDS 83664 83753 . - 0 ID=cds-AD11_RS31515;Parent=gene-AD11_RS31515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=83753,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AD11_RS31515;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 83993 84631 . + . ID=gene-AD11_RS09565;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AD11_RS09565;old_locus_tag=AD11_1333 NZ_JJLL01000110.1 Protein Homology CDS 83993 84631 . + 0 ID=cds-WP_000737224.1;Parent=gene-AD11_RS09565;Dbxref=GenBank:WP_000737224.1;Name=WP_000737224.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=AD11_RS09565;product=outer membrane protein OmpW;protein_id=WP_000737224.1;transl_table=11 NZ_JJLL01000110.1 RefSeq pseudogene 84677 85821 . - . ID=gene-AD11_RS09570;Name=AD11_RS09570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09570;old_locus_tag=AD11_1334;pseudo=true NZ_JJLL01000110.1 Protein Homology CDS 84677 85821 . - 0 ID=cds-AD11_RS09570;Parent=gene-AD11_RS09570;Note=frameshifted;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309784.1;locus_tag=AD11_RS09570;product=phage integrase Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 85799 86047 . - . ID=gene-AD11_RS09575;Name=AD11_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09575 NZ_JJLL01000110.1 Protein Homology CDS 85799 86047 . - 0 ID=cds-WP_000113189.1;Parent=gene-AD11_RS09575;Dbxref=GenBank:WP_000113189.1;Name=WP_000113189.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309785.1;locus_tag=AD11_RS09575;product=excisionase;protein_id=WP_000113189.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 86112 88583 . - . ID=gene-AD11_RS09580;Name=AD11_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09580;old_locus_tag=AD11_1335 NZ_JJLL01000110.1 Protein Homology CDS 86112 88583 . - 0 ID=cds-WP_000048526.1;Parent=gene-AD11_RS09580;Dbxref=GenBank:WP_000048526.1;Name=WP_000048526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AD11_RS09580;product=exonuclease;protein_id=WP_000048526.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 88676 88867 . - . ID=gene-AD11_RS09585;Name=AD11_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09585;old_locus_tag=AD11_1336 NZ_JJLL01000110.1 Protein Homology CDS 88676 88867 . - 0 ID=cds-WP_033865362.1;Parent=gene-AD11_RS09585;Dbxref=GenBank:WP_033865362.1;Name=WP_033865362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309787.1;locus_tag=AD11_RS09585;product=DUF1482 family protein;protein_id=WP_033865362.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 88864 89052 . - . ID=gene-AD11_RS09590;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AD11_RS09590;old_locus_tag=AD11_1337 NZ_JJLL01000110.1 Protein Homology CDS 88864 89052 . - 0 ID=cds-WP_000449192.1;Parent=gene-AD11_RS09590;Dbxref=GenBank:WP_000449192.1;Name=WP_000449192.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309788.1;locus_tag=AD11_RS09590;product=cell division inhibition protein DicB;protein_id=WP_000449192.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 89612 89890 . + . ID=gene-AD11_RS09600;Name=AD11_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09600;old_locus_tag=AD11_1339 NZ_JJLL01000110.1 Protein Homology CDS 89612 89890 . + 0 ID=cds-WP_000358771.1;Parent=gene-AD11_RS09600;Dbxref=GenBank:WP_000358771.1;Name=WP_000358771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358768.1;locus_tag=AD11_RS09600;product=hypothetical protein;protein_id=WP_000358771.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 89850 90251 . - . ID=gene-AD11_RS09605;Name=AD11_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09605;old_locus_tag=AD11_1340 NZ_JJLL01000110.1 Protein Homology CDS 89850 90251 . - 0 ID=cds-WP_001339605.1;Parent=gene-AD11_RS09605;Dbxref=GenBank:WP_001339605.1;Name=WP_001339605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394555.1;locus_tag=AD11_RS09605;product=hypothetical protein;protein_id=WP_001339605.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 90263 90415 . - . ID=gene-AD11_RS09610;Name=AD11_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09610;old_locus_tag=AD11_1341 NZ_JJLL01000110.1 Protein Homology CDS 90263 90415 . - 0 ID=cds-WP_000367380.1;Parent=gene-AD11_RS09610;Dbxref=GenBank:WP_000367380.1;Name=WP_000367380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000367379.1;locus_tag=AD11_RS09610;product=DUF1391 family protein;protein_id=WP_000367380.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 90681 91100 . - . ID=gene-AD11_RS09615;Name=AD11_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09615 NZ_JJLL01000110.1 Protein Homology CDS 90681 91100 . - 0 ID=cds-WP_000362153.1;Parent=gene-AD11_RS09615;Dbxref=GenBank:WP_000362153.1;Name=WP_000362153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362153.1;locus_tag=AD11_RS09615;product=hypothetical protein;protein_id=WP_000362153.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 91201 91482 . + . ID=gene-AD11_RS09620;Name=AD11_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09620 NZ_JJLL01000110.1 Protein Homology CDS 91201 91482 . + 0 ID=cds-WP_000391950.1;Parent=gene-AD11_RS09620;Dbxref=GenBank:WP_000391950.1;Name=WP_000391950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391949.1;locus_tag=AD11_RS09620;product=transcriptional regulator;protein_id=WP_000391950.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 91466 91891 . + . ID=gene-AD11_RS09625;Name=AD11_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09625;old_locus_tag=AD11_1343 NZ_JJLL01000110.1 Protein Homology CDS 91466 91891 . + 0 ID=cds-WP_001504533.1;Parent=gene-AD11_RS09625;Dbxref=GenBank:WP_001504533.1;Name=WP_001504533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310304.1;locus_tag=AD11_RS09625;product=toxin YdaT family protein;protein_id=WP_001504533.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 91914 92876 . + . ID=gene-AD11_RS09630;Name=AD11_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09630;old_locus_tag=AD11_1344 NZ_JJLL01000110.1 Protein Homology CDS 91914 92876 . + 0 ID=cds-WP_071998686.1;Parent=gene-AD11_RS09630;Dbxref=GenBank:WP_071998686.1;Name=WP_071998686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310303.2;locus_tag=AD11_RS09630;product=helix-turn-helix domain-containing protein;protein_id=WP_071998686.1;transl_table=11 NZ_JJLL01000110.1 RefSeq gene 92883 93629 . + . ID=gene-AD11_RS09635;Name=AD11_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09635;old_locus_tag=AD11_1345 NZ_JJLL01000110.1 Protein Homology CDS 92883 93629 . + 0 ID=cds-WP_001759950.1;Parent=gene-AD11_RS09635;Dbxref=GenBank:WP_001759950.1;Name=WP_001759950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309972.1;locus_tag=AD11_RS09635;product=ATP-binding protein;protein_id=WP_001759950.1;transl_table=11 NZ_JJLL01000110.1 RefSeq pseudogene 93652 93826 . + . ID=gene-AD11_RS32490;Name=AD11_RS32490;end_range=93826,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32490;old_locus_tag=AD11_1346;partial=true;pseudo=true NZ_JJLL01000110.1 Protein Homology CDS 93652 93826 . + 0 ID=cds-AD11_RS32490;Parent=gene-AD11_RS32490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=93826,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309973.2;locus_tag=AD11_RS32490;partial=true;product=DUF1627 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000111.1 1 57889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000111.1 RefSeq region 1 57889 . + . ID=NZ_JJLL01000111.1:1..57889;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000111.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS09665;Name=AD11_RS09665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09665;old_locus_tag=AD11_1347;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000111.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS09665;Parent=gene-AD11_RS09665;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS09665;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 656 4180 . - . ID=gene-AD11_RS09670;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AD11_RS09670;old_locus_tag=AD11_1348 NZ_JJLL01000111.1 Protein Homology CDS 656 4180 . - 0 ID=cds-WP_000628243.1;Parent=gene-AD11_RS09670;Dbxref=GenBank:WP_000628243.1;Name=WP_000628243.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415896.1;locus_tag=AD11_RS09670;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_000628243.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 4454 4720 . + . ID=gene-AD11_RS09675;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=AD11_RS09675;old_locus_tag=AD11_1350 NZ_JJLL01000111.1 Protein Homology CDS 4454 4720 . + 0 ID=cds-WP_001295715.1;Parent=gene-AD11_RS09675;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AD11_RS09675;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 4717 5139 . - . ID=gene-AD11_RS09680;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AD11_RS09680;old_locus_tag=AD11_1351 NZ_JJLL01000111.1 Protein Homology CDS 4717 5139 . - 0 ID=cds-WP_001298828.1;Parent=gene-AD11_RS09680;Dbxref=GenBank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AD11_RS09680;product=heat shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 5250 6239 . - . ID=gene-AD11_RS09685;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AD11_RS09685;old_locus_tag=AD11_1352 NZ_JJLL01000111.1 Protein Homology CDS 5250 6239 . - 0 ID=cds-WP_000762236.1;Parent=gene-AD11_RS09685;Dbxref=GenBank:WP_000762236.1;Name=WP_000762236.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415898.1;locus_tag=AD11_RS09685;product=D-lactate dehydrogenase;protein_id=WP_000762236.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 6447 9086 . + . ID=gene-AD11_RS09690;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=AD11_RS09690;old_locus_tag=AD11_1353 NZ_JJLL01000111.1 Protein Homology CDS 6447 9086 . + 0 ID=cds-WP_033865393.1;Parent=gene-AD11_RS09690;Dbxref=GenBank:WP_033865393.1;Name=WP_033865393.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AD11_RS09690;product=YdbH family protein;protein_id=WP_033865393.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 9083 9268 . + . ID=gene-AD11_RS09695;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=AD11_RS09695;old_locus_tag=AD11_1354 NZ_JJLL01000111.1 Protein Homology CDS 9083 9268 . + 0 ID=cds-WP_000698145.1;Parent=gene-AD11_RS09695;Dbxref=GenBank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AD11_RS09695;product=YnbE family lipoprotein;protein_id=WP_000698145.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 9276 9602 . + . ID=gene-AD11_RS09700;Name=ydbL;gbkey=Gene;gene=ydbL;gene_biotype=protein_coding;locus_tag=AD11_RS09700;old_locus_tag=AD11_1355 NZ_JJLL01000111.1 Protein Homology CDS 9276 9602 . + 0 ID=cds-WP_001300734.1;Parent=gene-AD11_RS09700;Dbxref=GenBank:WP_001300734.1;Name=WP_001300734.1;gbkey=CDS;gene=ydbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415901.2;locus_tag=AD11_RS09700;product=YdbL family protein;protein_id=WP_001300734.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 9774 10679 . - . ID=gene-AD11_RS09705;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=AD11_RS09705;old_locus_tag=AD11_1356 NZ_JJLL01000111.1 Protein Homology CDS 9774 10679 . - 0 ID=cds-WP_001067519.1;Parent=gene-AD11_RS09705;Dbxref=GenBank:WP_001067519.1;Name=WP_001067519.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415902.1;locus_tag=AD11_RS09705;product=transcriptional regulator FeaR;protein_id=WP_001067519.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 10915 12414 . + . ID=gene-AD11_RS09710;Name=feaB;gbkey=Gene;gene=feaB;gene_biotype=protein_coding;gene_synonym=maoB,padA;locus_tag=AD11_RS09710;old_locus_tag=AD11_1357 NZ_JJLL01000111.1 Protein Homology CDS 10915 12414 . + 0 ID=cds-WP_000138615.1;Parent=gene-AD11_RS09710;Dbxref=GenBank:WP_000138615.1;Name=WP_000138615.1;gbkey=CDS;gene=feaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=AD11_RS09710;product=phenylacetaldehyde dehydrogenase;protein_id=WP_000138615.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 12472 14745 . - . ID=gene-AD11_RS09715;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=AD11_RS09715;old_locus_tag=AD11_1358 NZ_JJLL01000111.1 Protein Homology CDS 12472 14745 . - 0 ID=cds-WP_000535469.1;Parent=gene-AD11_RS09715;Dbxref=GenBank:WP_000535469.1;Name=WP_000535469.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary methylamine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415904.3;locus_tag=AD11_RS09715;product=primary-amine oxidase;protein_id=WP_000535469.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 14993 17038 . - . ID=gene-AD11_RS09720;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=AD11_RS09720;old_locus_tag=AD11_1360 NZ_JJLL01000111.1 Protein Homology CDS 14993 17038 . - 0 ID=cds-WP_032169947.1;Parent=gene-AD11_RS09720;Dbxref=GenBank:WP_032169947.1;Name=WP_032169947.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415905.1;locus_tag=AD11_RS09720;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_032169947.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 17323 18252 . + . ID=gene-AD11_RS09725;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=AD11_RS09725;old_locus_tag=AD11_1361 NZ_JJLL01000111.1 Protein Homology CDS 17323 18252 . + 0 ID=cds-WP_000191077.1;Parent=gene-AD11_RS09725;Dbxref=GenBank:WP_000191077.1;Name=WP_000191077.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=AD11_RS09725;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_000191077.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 18264 18551 . + . ID=gene-AD11_RS09730;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=AD11_RS09730;old_locus_tag=AD11_1362 NZ_JJLL01000111.1 Protein Homology CDS 18264 18551 . + 0 ID=cds-WP_033865394.1;Parent=gene-AD11_RS09730;Dbxref=GenBank:WP_033865394.1;Name=WP_033865394.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415907.1;locus_tag=AD11_RS09730;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_033865394.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 18560 19306 . + . ID=gene-AD11_RS09735;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=AD11_RS09735;old_locus_tag=AD11_1363 NZ_JJLL01000111.1 Protein Homology CDS 18560 19306 . + 0 ID=cds-WP_001072837.1;Parent=gene-AD11_RS09735;Dbxref=GenBank:WP_001072837.1;Name=WP_001072837.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415908.1;locus_tag=AD11_RS09735;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_001072837.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 19321 19818 . + . ID=gene-AD11_RS09740;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=AD11_RS09740;old_locus_tag=AD11_1364 NZ_JJLL01000111.1 Protein Homology CDS 19321 19818 . + 0 ID=cds-WP_001189201.1;Parent=gene-AD11_RS09740;Dbxref=GenBank:WP_001189201.1;Name=WP_001189201.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415909.4;locus_tag=AD11_RS09740;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_001189201.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 19826 20896 . + . ID=gene-AD11_RS09745;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=AD11_RS09745;old_locus_tag=AD11_1365 NZ_JJLL01000111.1 Protein Homology CDS 19826 20896 . + 0 ID=cds-WP_000206388.1;Parent=gene-AD11_RS09745;Dbxref=GenBank:WP_000206388.1;Name=WP_000206388.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415910.1;locus_tag=AD11_RS09745;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_000206388.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 20893 21660 . + . ID=gene-AD11_RS09750;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=AD11_RS09750;old_locus_tag=AD11_1366 NZ_JJLL01000111.1 Protein Homology CDS 20893 21660 . + 0 ID=cds-WP_001292346.1;Parent=gene-AD11_RS09750;Dbxref=GenBank:WP_001292346.1;Name=WP_001292346.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415911.1;locus_tag=AD11_RS09750;product=2%2C3-dehydroadipyl-CoA hydratase PaaF;protein_id=WP_001292346.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 21660 22448 . + . ID=gene-AD11_RS09755;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=AD11_RS09755;old_locus_tag=AD11_1367 NZ_JJLL01000111.1 Protein Homology CDS 21660 22448 . + 0 ID=cds-WP_000969777.1;Parent=gene-AD11_RS09755;Dbxref=GenBank:WP_000969777.1;Name=WP_000969777.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415912.1;locus_tag=AD11_RS09755;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_000969777.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 22453 23877 . + . ID=gene-AD11_RS09760;Name=paaH;gbkey=Gene;gene=paaH;gene_biotype=protein_coding;locus_tag=AD11_RS09760;old_locus_tag=AD11_1368 NZ_JJLL01000111.1 Protein Homology CDS 22453 23877 . + 0 ID=cds-WP_033865395.1;Parent=gene-AD11_RS09760;Dbxref=GenBank:WP_033865395.1;Name=WP_033865395.1;Ontology_term=GO:0010124,GO:0008691;gbkey=CDS;gene=paaH;go_function=3-hydroxybutyryl-CoA dehydrogenase activity|0008691||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001391854.1;locus_tag=AD11_RS09760;product=3-hydroxyacyl-CoA dehydrogenase PaaH;protein_id=WP_033865395.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 23867 24289 . + . ID=gene-AD11_RS09765;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=AD11_RS09765;old_locus_tag=AD11_1369 NZ_JJLL01000111.1 Protein Homology CDS 23867 24289 . + 0 ID=cds-WP_000018413.1;Parent=gene-AD11_RS09765;Dbxref=GenBank:WP_000018413.1;Name=WP_000018413.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415914.1;locus_tag=AD11_RS09765;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_000018413.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 24289 25494 . + . ID=gene-AD11_RS09770;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;gene_synonym=paaE,ydbW;locus_tag=AD11_RS09770;old_locus_tag=AD11_1370 NZ_JJLL01000111.1 Protein Homology CDS 24289 25494 . + 0 ID=cds-WP_001206186.1;Parent=gene-AD11_RS09770;Dbxref=GenBank:WP_001206186.1;Name=WP_001206186.1;gbkey=CDS;gene=paaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415915.1;locus_tag=AD11_RS09770;product=bifunctional 3-oxoadipyl-CoA/3-oxo-5%2C6-dehydrosuberyl-CoA thiolase;protein_id=WP_001206186.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 25521 26834 . + . ID=gene-AD11_RS09775;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=AD11_RS09775;old_locus_tag=AD11_1371 NZ_JJLL01000111.1 Protein Homology CDS 25521 26834 . + 0 ID=cds-WP_000632293.1;Parent=gene-AD11_RS09775;Dbxref=GenBank:WP_000632293.1;Name=WP_000632293.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415916.1;locus_tag=AD11_RS09775;product=phenylacetate--CoA ligase PaaK;protein_id=WP_000632293.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 26935 27885 . + . ID=gene-AD11_RS09780;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=AD11_RS09780;old_locus_tag=AD11_1372 NZ_JJLL01000111.1 Protein Homology CDS 26935 27885 . + 0 ID=cds-WP_001619404.1;Parent=gene-AD11_RS09780;Dbxref=GenBank:WP_001619404.1;Name=WP_001619404.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415917.1;locus_tag=AD11_RS09780;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_001619404.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 27867 28457 . + . ID=gene-AD11_RS09785;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=AD11_RS09785;old_locus_tag=AD11_1373 NZ_JJLL01000111.1 Protein Homology CDS 27867 28457 . + 0 ID=cds-WP_001123464.1;Parent=gene-AD11_RS09785;Dbxref=GenBank:WP_001123464.1;Name=WP_001123464.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415918.1;locus_tag=AD11_RS09785;product=phenylacetic acid degradation protein PaaY;protein_id=WP_001123464.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 28689 29549 . + . ID=gene-AD11_RS09790;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=AD11_RS09790;old_locus_tag=AD11_1374 NZ_JJLL01000111.1 Protein Homology CDS 28689 29549 . + 0 ID=cds-WP_000097802.1;Parent=gene-AD11_RS09790;Dbxref=GenBank:WP_000097802.1;Name=WP_000097802.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415924.1;locus_tag=AD11_RS09790;product=pyridoxine 4-dehydrogenase;protein_id=WP_000097802.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 29613 31919 . + . ID=gene-AD11_RS09795;Name=ydbD;gbkey=Gene;gene=ydbD;gene_biotype=protein_coding;locus_tag=AD11_RS09795;old_locus_tag=AD11_1375 NZ_JJLL01000111.1 Protein Homology CDS 29613 31919 . + 0 ID=cds-WP_001619405.1;Parent=gene-AD11_RS09795;Dbxref=GenBank:WP_001619405.1;Name=WP_001619405.1;gbkey=CDS;gene=ydbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=AD11_RS09795;product=DUF2773 domain-containing bactofilin;protein_id=WP_001619405.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 32090 32695 . + . ID=gene-AD11_RS09800;Name=ynbA;gbkey=Gene;gene=ynbA;gene_biotype=protein_coding;locus_tag=AD11_RS09800;old_locus_tag=AD11_1376 NZ_JJLL01000111.1 Protein Homology CDS 32090 32695 . + 0 ID=cds-WP_000177515.1;Parent=gene-AD11_RS09800;Dbxref=GenBank:WP_000177515.1;Name=WP_000177515.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynbA;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415926.4;locus_tag=AD11_RS09800;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_000177515.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 32695 33591 . + . ID=gene-AD11_RS09805;Name=ynbB;gbkey=Gene;gene=ynbB;gene_biotype=protein_coding;locus_tag=AD11_RS09805;old_locus_tag=AD11_1377 NZ_JJLL01000111.1 Protein Homology CDS 32695 33591 . + 0 ID=cds-WP_000890941.1;Parent=gene-AD11_RS09805;Dbxref=GenBank:WP_000890941.1;Name=WP_000890941.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=ynbB;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415927.1;locus_tag=AD11_RS09805;product=phosphatidate cytidylyltransferase;protein_id=WP_000890941.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 33607 35364 . + . ID=gene-AD11_RS09810;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;locus_tag=AD11_RS09810;old_locus_tag=AD11_1378 NZ_JJLL01000111.1 Protein Homology CDS 33607 35364 . + 0 ID=cds-WP_001619406.1;Parent=gene-AD11_RS09810;Dbxref=GenBank:WP_001619406.1;Name=WP_001619406.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;gene=ynbC;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415928.1;locus_tag=AD11_RS09810;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_001619406.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 35354 36670 . + . ID=gene-AD11_RS09815;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=AD11_RS09815;old_locus_tag=AD11_1379 NZ_JJLL01000111.1 Protein Homology CDS 35354 36670 . + 0 ID=cds-WP_000627356.1;Parent=gene-AD11_RS09815;Dbxref=GenBank:WP_000627356.1;Name=WP_000627356.1;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=AD11_RS09815;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_000627356.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 36724 37329 . - . ID=gene-AD11_RS09820;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AD11_RS09820;old_locus_tag=AD11_1380 NZ_JJLL01000111.1 Protein Homology CDS 36724 37329 . - 0 ID=cds-WP_000048950.1;Parent=gene-AD11_RS09820;Dbxref=GenBank:WP_000048950.1;Name=WP_000048950.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415930.1;locus_tag=AD11_RS09820;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048950.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 37530 41432 . + . ID=gene-AD11_RS09825;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AD11_RS09825;old_locus_tag=AD11_1381 NZ_JJLL01000111.1 Protein Homology CDS 37530 41432 . + 0 ID=cds-WP_033866361.1;Parent=gene-AD11_RS09825;Dbxref=GenBank:WP_033866361.1;Name=WP_033866361.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AD11_RS09825;product=ATP-dependent RNA helicase HrpA;protein_id=WP_033866361.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 41704 42504 . + . ID=gene-AD11_RS09830;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AD11_RS09830;old_locus_tag=AD11_1382 NZ_JJLL01000111.1 Protein Homology CDS 41704 42504 . + 0 ID=cds-WP_001027942.1;Parent=gene-AD11_RS09830;Dbxref=GenBank:WP_001027942.1;Name=WP_001027942.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=AD11_RS09830;product=DUF218 domain-containing protein YdcF;protein_id=WP_001027942.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 42701 44140 . + . ID=gene-AD11_RS09835;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AD11_RS09835;old_locus_tag=AD11_1383 NZ_JJLL01000111.1 Protein Homology CDS 42701 44140 . + 0 ID=cds-WP_033865399.1;Parent=gene-AD11_RS09835;Dbxref=GenBank:WP_033865399.1;Name=WP_033865399.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415933.1;locus_tag=AD11_RS09835;product=aldehyde dehydrogenase;protein_id=WP_033865399.1;transl_table=11 NZ_JJLL01000111.1 RefSeq pseudogene 44182 45182 . - . ID=gene-AD11_RS31520;Name=gap;gbkey=Gene;gene=gap;gene_biotype=pseudogene;locus_tag=AD11_RS31520;pseudo=true NZ_JJLL01000111.1 Protein Homology CDS 44182 45182 . - 0 ID=cds-AD11_RS31520;Parent=gene-AD11_RS31520;Note=frameshifted%3B internal stop;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AD11_RS31520;product=type I glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 45371 45901 . + . ID=gene-AD11_RS09855;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AD11_RS09855;old_locus_tag=AD11_1387 NZ_JJLL01000111.1 Protein Homology CDS 45371 45901 . + 0 ID=cds-WP_033866362.1;Parent=gene-AD11_RS09855;Dbxref=GenBank:WP_033866362.1;Name=WP_033866362.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AD11_RS09855;product=cytochrome b561;protein_id=WP_033866362.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 46146 46319 . + . ID=gene-AD11_RS09860;Name=AD11_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS09860;old_locus_tag=AD11_1388 NZ_JJLL01000111.1 Protein Homology CDS 46146 46319 . + 0 ID=cds-WP_000731833.1;Parent=gene-AD11_RS09860;Dbxref=GenBank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AD11_RS09860;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 46345 46413 . + . ID=gene-AD11_RS32495;Name=yncP;gbkey=Gene;gene=yncP;gene_biotype=protein_coding;locus_tag=AD11_RS32495 NZ_JJLL01000111.1 Protein Homology CDS 46345 46413 . + 0 ID=cds-WP_212591405.1;Parent=gene-AD11_RS32495;Dbxref=GenBank:WP_212591405.1;Name=WP_212591405.1;gbkey=CDS;gene=yncP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AD11_RS32495;product=hypothetical protein;protein_id=WP_212591405.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 46391 46540 . - . ID=gene-AD11_RS09865;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AD11_RS09865 NZ_JJLL01000111.1 Protein Homology CDS 46391 46540 . - 0 ID=cds-WP_001320773.1;Parent=gene-AD11_RS09865;Dbxref=GenBank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AD11_RS09865;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001320773.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 46939 48579 . + . ID=gene-AD11_RS09870;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AD11_RS09870;old_locus_tag=AD11_1389 NZ_JJLL01000111.1 Protein Homology CDS 46939 48579 . + 0 ID=cds-WP_001098531.1;Parent=gene-AD11_RS09870;Dbxref=GenBank:WP_001098531.1;Name=WP_001098531.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AD11_RS09870;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_001098531.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 48617 49540 . - . ID=gene-AD11_RS09875;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AD11_RS09875;old_locus_tag=AD11_1390 NZ_JJLL01000111.1 Protein Homology CDS 48617 49540 . - 0 ID=cds-WP_000414567.1;Parent=gene-AD11_RS09875;Dbxref=GenBank:WP_000414567.1;Name=WP_000414567.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415939.2;locus_tag=AD11_RS09875;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414567.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 49757 51100 . + . ID=gene-AD11_RS09880;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AD11_RS09880;old_locus_tag=AD11_1391 NZ_JJLL01000111.1 Protein Homology CDS 49757 51100 . + 0 ID=cds-WP_000013783.1;Parent=gene-AD11_RS09880;Dbxref=GenBank:WP_000013783.1;Name=WP_000013783.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310055.1;locus_tag=AD11_RS09880;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000013783.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 51325 52980 . + . ID=gene-AD11_RS09885;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AD11_RS09885;old_locus_tag=AD11_1392 NZ_JJLL01000111.1 Protein Homology CDS 51325 52980 . + 0 ID=cds-WP_000375956.1;Parent=gene-AD11_RS09885;Dbxref=GenBank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=AD11_RS09885;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 53120 53344 . + . ID=gene-AD11_RS09895;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AD11_RS09895;old_locus_tag=AD11_1393 NZ_JJLL01000111.1 Protein Homology CDS 53120 53344 . + 0 ID=cds-WP_001296778.1;Parent=gene-AD11_RS09895;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AD11_RS09895;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 53407 53946 . + . ID=gene-AD11_RS09900;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AD11_RS09900;old_locus_tag=AD11_1394 NZ_JJLL01000111.1 Protein Homology CDS 53407 53946 . + 0 ID=cds-WP_001491065.1;Parent=gene-AD11_RS09900;Dbxref=GenBank:WP_001491065.1;Name=WP_001491065.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415944.1;locus_tag=AD11_RS09900;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_001491065.1;transl_table=11 NZ_JJLL01000111.1 RefSeq pseudogene 53938 54917 . - . ID=gene-AD11_RS09905;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=pseudogene;locus_tag=AD11_RS09905;old_locus_tag=AD11_1395;pseudo=true NZ_JJLL01000111.1 Protein Homology CDS 53938 54917 . - 0 ID=cds-AD11_RS09905;Parent=gene-AD11_RS09905;Note=frameshifted;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415945.1;locus_tag=AD11_RS09905;product=YdcK family protein;pseudo=true;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 55041 56033 . + . ID=gene-AD11_RS09910;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AD11_RS09910;old_locus_tag=AD11_1397 NZ_JJLL01000111.1 Protein Homology CDS 55041 56033 . + 0 ID=cds-WP_001296725.1;Parent=gene-AD11_RS09910;Dbxref=GenBank:WP_001296725.1;Name=WP_001296725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=AD11_RS09910;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001296725.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 56030 56623 . + . ID=gene-AD11_RS09915;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AD11_RS09915;old_locus_tag=AD11_1398 NZ_JJLL01000111.1 Protein Homology CDS 56030 56623 . + 0 ID=cds-WP_000586732.1;Parent=gene-AD11_RS09915;Dbxref=GenBank:WP_000586732.1;Name=WP_000586732.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AD11_RS09915;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586732.1;transl_table=11 NZ_JJLL01000111.1 RefSeq gene 56925 57593 . + . ID=gene-AD11_RS09920;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AD11_RS09920;old_locus_tag=AD11_1400 NZ_JJLL01000111.1 Protein Homology CDS 56925 57593 . + 0 ID=cds-WP_001261013.1;Parent=gene-AD11_RS09920;Dbxref=GenBank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AD11_RS09920;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11 NZ_JJLL01000111.1 RefSeq pseudogene 57611 57889 . - . ID=gene-AD11_RS09925;Name=tnpA;end_range=57889,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AD11_RS09925;partial=true;pseudo=true NZ_JJLL01000111.1 Protein Homology CDS 57611 57889 . - 0 ID=cds-AD11_RS09925;Parent=gene-AD11_RS09925;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=57889,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000604919.1;locus_tag=AD11_RS09925;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000112.1 1 29851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000112.1 RefSeq region 1 29851 . + . ID=NZ_JJLL01000112.1:1..29851;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000112.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS09930;Name=AD11_RS09930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09930;old_locus_tag=AD11_1401;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000112.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS09930;Parent=gene-AD11_RS09930;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS09930;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000112.1 RefSeq pseudogene 1496 1927 . - . ID=gene-AD11_RS09940;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AD11_RS09940;old_locus_tag=AD11_1403;pseudo=true NZ_JJLL01000112.1 Protein Homology CDS 1496 1927 . - 0 ID=cds-AD11_RS09940;Parent=gene-AD11_RS09940;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=AD11_RS09940;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 1935 3143 . + . ID=gene-AD11_RS09945;Name=insQ;gbkey=Gene;gene=insQ;gene_biotype=protein_coding;locus_tag=AD11_RS09945;old_locus_tag=AD11_1404 NZ_JJLL01000112.1 Protein Homology CDS 1935 3143 . + 0 ID=cds-WP_033866364.1;Parent=gene-AD11_RS09945;Dbxref=GenBank:WP_033866364.1;Name=WP_033866364.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;gene=insQ;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AD11_RS09945;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_033866364.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 3183 4397 . - . ID=gene-AD11_RS09950;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AD11_RS09950;old_locus_tag=AD11_1405 NZ_JJLL01000112.1 Protein Homology CDS 3183 4397 . - 0 ID=cds-WP_071597387.1;Parent=gene-AD11_RS09950;Dbxref=GenBank:WP_071597387.1;Name=WP_071597387.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=AD11_RS09950;product=BenE family transporter YdcO;protein_id=WP_071597387.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 4450 4986 . + . ID=gene-AD11_RS09955;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AD11_RS09955;old_locus_tag=AD11_1406 NZ_JJLL01000112.1 Protein Homology CDS 4450 4986 . + 0 ID=cds-WP_000429133.1;Parent=gene-AD11_RS09955;Dbxref=GenBank:WP_000429133.1;Name=WP_000429133.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AD11_RS09955;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429133.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 5059 7020 . + . ID=gene-AD11_RS09960;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AD11_RS09960;old_locus_tag=AD11_1407 NZ_JJLL01000112.1 Protein Homology CDS 5059 7020 . + 0 ID=cds-WP_033866365.1;Parent=gene-AD11_RS09960;Dbxref=GenBank:WP_033866365.1;Name=WP_033866365.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AD11_RS09960;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_033866365.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 7112 7342 . - . ID=gene-AD11_RS09965;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AD11_RS09965;old_locus_tag=AD11_1408 NZ_JJLL01000112.1 Protein Homology CDS 7112 7342 . - 0 ID=cds-WP_000494244.1;Parent=gene-AD11_RS09965;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AD11_RS09965;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JJLL01000112.1 RefSeq pseudogene 7564 7718 . + . ID=gene-AD11_RS09970;Name=AD11_RS09970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS09970;pseudo=true NZ_JJLL01000112.1 Protein Homology CDS 7564 7718 . + 0 ID=cds-AD11_RS09970;Parent=gene-AD11_RS09970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AD11_RS09970;product=mRNA interferase;pseudo=true;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 7764 8180 . + . ID=gene-AD11_RS09975;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AD11_RS09975;old_locus_tag=AD11_1411 NZ_JJLL01000112.1 Protein Homology CDS 7764 8180 . + 0 ID=cds-WP_001270286.1;Parent=gene-AD11_RS09975;Dbxref=GenBank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AD11_RS09975;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 8259 9665 . + . ID=gene-AD11_RS09980;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AD11_RS09980;old_locus_tag=AD11_1412 NZ_JJLL01000112.1 Protein Homology CDS 8259 9665 . + 0 ID=cds-WP_001543733.1;Parent=gene-AD11_RS09980;Dbxref=GenBank:WP_001543733.1;Name=WP_001543733.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415956.1;locus_tag=AD11_RS09980;product=PLP-dependent aminotransferase family protein;protein_id=WP_001543733.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 9910 11055 . + . ID=gene-AD11_RS09985;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AD11_RS09985;old_locus_tag=AD11_1413 NZ_JJLL01000112.1 Protein Homology CDS 9910 11055 . + 0 ID=cds-WP_033865408.1;Parent=gene-AD11_RS09985;Dbxref=GenBank:WP_033865408.1;Name=WP_033865408.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AD11_RS09985;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_033865408.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 11073 12086 . + . ID=gene-AD11_RS09990;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AD11_RS09990;old_locus_tag=AD11_1414 NZ_JJLL01000112.1 Protein Homology CDS 11073 12086 . + 0 ID=cds-WP_000220396.1;Parent=gene-AD11_RS09990;Dbxref=GenBank:WP_000220396.1;Name=WP_000220396.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AD11_RS09990;product=ABC transporter ATP-binding protein;protein_id=WP_000220396.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 12087 13028 . + . ID=gene-AD11_RS09995;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=AD11_RS09995;old_locus_tag=AD11_1415 NZ_JJLL01000112.1 Protein Homology CDS 12087 13028 . + 0 ID=cds-WP_001251313.1;Parent=gene-AD11_RS09995;Dbxref=GenBank:WP_001251313.1;Name=WP_001251313.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415959.1;locus_tag=AD11_RS09995;product=ABC transporter permease;protein_id=WP_001251313.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 13018 13812 . + . ID=gene-AD11_RS10000;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AD11_RS10000;old_locus_tag=AD11_1416 NZ_JJLL01000112.1 Protein Homology CDS 13018 13812 . + 0 ID=cds-WP_000555458.1;Parent=gene-AD11_RS10000;Dbxref=GenBank:WP_000555458.1;Name=WP_000555458.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415960.1;locus_tag=AD11_RS10000;product=ABC transporter permease;protein_id=WP_000555458.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 13834 15258 . + . ID=gene-AD11_RS10005;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AD11_RS10005;old_locus_tag=AD11_1417 NZ_JJLL01000112.1 Protein Homology CDS 13834 15258 . + 0 ID=cds-WP_001163875.1;Parent=gene-AD11_RS10005;Dbxref=GenBank:WP_001163875.1;Name=WP_001163875.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415961.1;locus_tag=AD11_RS10005;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163875.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 15355 15450 . - . ID=gene-AD11_RS28945;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AD11_RS28945 NZ_JJLL01000112.1 Protein Homology CDS 15355 15450 . - 0 ID=cds-WP_001310798.1;Parent=gene-AD11_RS28945;Dbxref=GenBank:WP_001310798.1;Name=WP_001310798.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AD11_RS28945;product=stress response membrane protein YncL;protein_id=WP_001310798.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 15645 15818 . + . ID=gene-AD11_RS10015;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AD11_RS10015;old_locus_tag=AD11_1419 NZ_JJLL01000112.1 Protein Homology CDS 15645 15818 . + 0 ID=cds-WP_000061178.1;Parent=gene-AD11_RS10015;Dbxref=GenBank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AD11_RS10015;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 15904 16137 . + . ID=gene-AD11_RS10020;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AD11_RS10020;old_locus_tag=AD11_1420 NZ_JJLL01000112.1 Protein Homology CDS 15904 16137 . + 0 ID=cds-WP_000018633.1;Parent=gene-AD11_RS10020;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AD11_RS10020;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 16138 16587 . - . ID=gene-AD11_RS10025;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AD11_RS10025;old_locus_tag=AD11_1421 NZ_JJLL01000112.1 Protein Homology CDS 16138 16587 . - 0 ID=cds-WP_001076535.1;Parent=gene-AD11_RS10025;Dbxref=GenBank:WP_001076535.1;Name=WP_001076535.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=AD11_RS10025;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 16584 17102 . - . ID=gene-AD11_RS10030;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AD11_RS10030;old_locus_tag=AD11_1422 NZ_JJLL01000112.1 Protein Homology CDS 16584 17102 . - 0 ID=cds-WP_001310799.1;Parent=gene-AD11_RS10030;Dbxref=GenBank:WP_001310799.1;Name=WP_001310799.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415965.1;locus_tag=AD11_RS10030;product=GNAT family N-acetyltransferase;protein_id=WP_001310799.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 17283 18320 . + . ID=gene-AD11_RS10035;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AD11_RS10035;old_locus_tag=AD11_1423 NZ_JJLL01000112.1 Protein Homology CDS 17283 18320 . + 0 ID=cds-WP_000531462.1;Parent=gene-AD11_RS10035;Dbxref=GenBank:WP_000531462.1;Name=WP_000531462.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AD11_RS10035;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_000531462.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 18518 19183 . + . ID=gene-AD11_RS10040;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=AD11_RS10040;old_locus_tag=AD11_1424 NZ_JJLL01000112.1 Protein Homology CDS 18518 19183 . + 0 ID=cds-WP_033865410.1;Parent=gene-AD11_RS10040;Dbxref=GenBank:WP_033865410.1;Name=WP_033865410.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=AD11_RS10040;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_033865410.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 19219 21321 . - . ID=gene-AD11_RS10045;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AD11_RS10045;old_locus_tag=AD11_1425 NZ_JJLL01000112.1 Protein Homology CDS 19219 21321 . - 0 ID=cds-WP_001543735.1;Parent=gene-AD11_RS10045;Dbxref=GenBank:WP_001543735.1;Name=WP_001543735.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=AD11_RS10045;product=TonB-dependent receptor PqqU;protein_id=WP_001543735.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 21563 22624 . + . ID=gene-AD11_RS10050;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AD11_RS10050;old_locus_tag=AD11_1427 NZ_JJLL01000112.1 Protein Homology CDS 21563 22624 . + 0 ID=cds-WP_000550672.1;Parent=gene-AD11_RS10050;Dbxref=GenBank:WP_000550672.1;Name=WP_000550672.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=AD11_RS10050;product=YncE family protein;protein_id=WP_000550672.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 22739 24238 . - . ID=gene-AD11_RS10055;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AD11_RS10055;old_locus_tag=AD11_1428 NZ_JJLL01000112.1 Protein Homology CDS 22739 24238 . - 0 ID=cds-WP_001400324.1;Parent=gene-AD11_RS10055;Dbxref=GenBank:WP_001400324.1;Name=WP_001400324.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AD11_RS10055;product=L-asparagine permease;protein_id=WP_001400324.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 24505 25122 . + . ID=gene-AD11_RS10060;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=AD11_RS10060;old_locus_tag=AD11_1429 NZ_JJLL01000112.1 Protein Homology CDS 24505 25122 . + 0 ID=cds-WP_000598850.1;Parent=gene-AD11_RS10060;Dbxref=GenBank:WP_000598850.1;Name=WP_000598850.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yncG;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AD11_RS10060;product=glutathione S-transferase family protein;protein_id=WP_000598850.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 25198 25410 . + . ID=gene-AD11_RS10065;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=AD11_RS10065;old_locus_tag=AD11_1430 NZ_JJLL01000112.1 Protein Homology CDS 25198 25410 . + 0 ID=cds-WP_000226995.1;Parent=gene-AD11_RS10065;Dbxref=GenBank:WP_000226995.1;Name=WP_000226995.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415972.1;locus_tag=AD11_RS10065;product=YncH family protein;protein_id=WP_000226995.1;transl_table=11 NZ_JJLL01000112.1 RefSeq gene 26230 28338 . + . ID=gene-AD11_RS10070;Name=AD11_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10070;old_locus_tag=AD11_1432 NZ_JJLL01000112.1 Protein Homology CDS 26230 28338 . + 0 ID=cds-WP_021823727.1;Parent=gene-AD11_RS10070;Dbxref=GenBank:WP_021823727.1;Name=WP_021823727.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AD11_RS10070;product=type VI secretion system tip protein VgrG;protein_id=WP_021823727.1;transl_table=11 NZ_JJLL01000112.1 RefSeq pseudogene 28405 29851 . + . ID=gene-AD11_RS10075;Name=rhsD;end_range=29851,.;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AD11_RS10075;old_locus_tag=AD11_1433;partial=true;pseudo=true NZ_JJLL01000112.1 Protein Homology CDS 28405 29851 . + 0 ID=cds-AD11_RS10075;Parent=gene-AD11_RS10075;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=29851,.;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AD11_RS10075;partial=true;product=rhs element protein RhsD;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000113.1 1 5245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000113.1 RefSeq region 1 5245 . + . ID=NZ_JJLL01000113.1:1..5245;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000113.1 RefSeq pseudogene 1 3538 . + . ID=gene-AD11_RS27460;Name=AD11_RS27460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27460;old_locus_tag=AD11_1435;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000113.1 Protein Homology CDS 1 3538 . + 0 ID=cds-AD11_RS27460;Parent=gene-AD11_RS27460;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310088.2;locus_tag=AD11_RS27460;partial=true;product=RHS element core protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000113.1 RefSeq gene 3550 3945 . + . ID=gene-AD11_RS32510;Name=AD11_RS32510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32510;old_locus_tag=AD11_1436 NZ_JJLL01000113.1 Protein Homology CDS 3550 3945 . + 0 ID=cds-WP_248784881.1;Parent=gene-AD11_RS32510;Dbxref=GenBank:WP_248784881.1;Name=WP_248784881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759875.1;locus_tag=AD11_RS32510;product=RHS element protein dsORF-e4;protein_id=WP_248784881.1;transl_table=11 NZ_JJLL01000113.1 RefSeq pseudogene 3967 4065 . - . ID=gene-AD11_RS28970;Name=AD11_RS28970;end_range=4065,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28970;partial=true;pseudo=true NZ_JJLL01000113.1 Protein Homology CDS 3967 4065 . - 0 ID=cds-AD11_RS28970;Parent=gene-AD11_RS28970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4065,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AD11_RS28970;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000113.1 RefSeq gene 4393 5245 . + . ID=gene-AD11_RS10100;Name=AD11_RS10100;end_range=5245,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10100;old_locus_tag=AD11_1437;partial=true NZ_JJLL01000113.1 Protein Homology CDS 4393 5245 . + 0 ID=cds-WP_033866368.1;Parent=gene-AD11_RS10100;Dbxref=GenBank:WP_033866368.1;Name=WP_033866368.1;Ontology_term=GO:0006313,GO:0004803;end_range=5245,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS10100;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_033866368.1;transl_table=11 ##sequence-region NZ_JJLL01000114.1 1 17147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000114.1 RefSeq region 1 17147 . + . ID=NZ_JJLL01000114.1:1..17147;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000114.1 RefSeq gene 1 1178 . - . ID=gene-AD11_RS10105;Name=AD11_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10105;old_locus_tag=AD11_1438;partial=true;start_range=.,1 NZ_JJLL01000114.1 Protein Homology CDS 1 1178 . - 0 ID=cds-WP_000358924.1;Parent=gene-AD11_RS10105;Dbxref=GenBank:WP_000358924.1;Name=WP_000358924.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AD11_RS10105;partial=true;product=glutamate decarboxylase;protein_id=WP_000358924.1;start_range=.,1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 1540 4323 . - . ID=gene-AD11_RS10110;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=AD11_RS10110;old_locus_tag=AD11_1440 NZ_JJLL01000114.1 Protein Homology CDS 1540 4323 . - 0 ID=cds-WP_001244979.1;Parent=gene-AD11_RS10110;Dbxref=GenBank:WP_001244979.1;Name=WP_001244979.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pqqL;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AD11_RS10110;product=M16 family metallopeptidase;protein_id=WP_001244979.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 4380 6752 . - . ID=gene-AD11_RS10115;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=AD11_RS10115;old_locus_tag=AD11_1441 NZ_JJLL01000114.1 Protein Homology CDS 4380 6752 . - 0 ID=cds-WP_033866370.1;Parent=gene-AD11_RS10115;Dbxref=GenBank:WP_033866370.1;Name=WP_033866370.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;gene=yddB;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416012.1;locus_tag=AD11_RS10115;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_033866370.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 6790 8475 . - . ID=gene-AD11_RS10120;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=AD11_RS10120;old_locus_tag=AD11_1442 NZ_JJLL01000114.1 Protein Homology CDS 6790 8475 . - 0 ID=cds-WP_000628585.1;Parent=gene-AD11_RS10120;Dbxref=GenBank:WP_000628585.1;Name=WP_000628585.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yddA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AD11_RS10120;product=ABC transporter ATP-binding protein/permease;protein_id=WP_000628585.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 8678 8800 . + . ID=gene-AD11_RS31525;Name=AD11_RS31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31525 NZ_JJLL01000114.1 Protein Homology CDS 8678 8800 . + 0 ID=cds-WP_120795387.1;Parent=gene-AD11_RS31525;Dbxref=GenBank:WP_120795387.1;Name=WP_120795387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AD11_RS31525;product=protein YneP;protein_id=WP_120795387.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 8766 9923 . - . ID=gene-AD11_RS10125;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=AD11_RS10125;old_locus_tag=AD11_1443 NZ_JJLL01000114.1 Protein Homology CDS 8766 9923 . - 0 ID=cds-WP_001301030.1;Parent=gene-AD11_RS10125;Dbxref=GenBank:WP_001301030.1;Name=WP_001301030.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AD11_RS10125;product=anaerobic sulfatase maturase;protein_id=WP_001301030.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 9975 11657 . - . ID=gene-AD11_RS10130;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;locus_tag=AD11_RS10130;old_locus_tag=AD11_1444 NZ_JJLL01000114.1 Protein Homology CDS 9975 11657 . - 0 ID=cds-WP_001295684.1;Parent=gene-AD11_RS10130;Dbxref=GenBank:WP_001295684.1;Name=WP_001295684.1;Ontology_term=GO:0008484;gbkey=CDS;gene=ydeN;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416015.2;locus_tag=AD11_RS10130;product=sulfatase-like hydrolase/transferase;protein_id=WP_001295684.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 12059 12820 . - . ID=gene-AD11_RS10135;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AD11_RS10135;old_locus_tag=AD11_1445 NZ_JJLL01000114.1 Protein Homology CDS 12059 12820 . - 0 ID=cds-WP_000060500.1;Parent=gene-AD11_RS10135;Dbxref=GenBank:WP_000060500.1;Name=WP_000060500.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416016.1;locus_tag=AD11_RS10135;product=acid stress response transcriptional regulator YdeO;protein_id=WP_000060500.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 12894 13091 . - . ID=gene-AD11_RS10140;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AD11_RS10140;old_locus_tag=AD11_1446 NZ_JJLL01000114.1 Protein Homology CDS 12894 13091 . - 0 ID=cds-WP_000543394.1;Parent=gene-AD11_RS10140;Dbxref=GenBank:WP_000543394.1;Name=WP_000543394.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=AD11_RS10140;product=two-component system connector SafA;protein_id=WP_000543394.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 13339 15618 . - . ID=gene-AD11_RS10145;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AD11_RS10145;old_locus_tag=AD11_1447 NZ_JJLL01000114.1 Protein Homology CDS 13339 15618 . - 0 ID=cds-WP_001382671.1;Parent=gene-AD11_RS10145;Dbxref=GenBank:WP_001382671.1;Name=WP_001382671.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AD11_RS10145;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_001382671.1;transl_table=11 NZ_JJLL01000114.1 RefSeq gene 15975 17137 . - . ID=gene-AD11_RS10150;Name=AD11_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10150;old_locus_tag=AD11_1448 NZ_JJLL01000114.1 Protein Homology CDS 16876 17137 . - 0 ID=cds-WP_103852365.1-4;Parent=gene-AD11_RS10150;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS10150;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000114.1 Protein Homology CDS 15975 16876 . - 2 ID=cds-WP_103852365.1-4;Parent=gene-AD11_RS10150;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS10150;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 ##sequence-region NZ_JJLL01000115.1 1 5600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000115.1 RefSeq region 1 5600 . + . ID=NZ_JJLL01000115.1:1..5600;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000115.1 RefSeq gene 22 1184 . - . ID=gene-AD11_RS10160;Name=AD11_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10160;old_locus_tag=AD11_1450 NZ_JJLL01000115.1 Protein Homology CDS 923 1184 . - 0 ID=cds-WP_103852365.1-5;Parent=gene-AD11_RS10160;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS10160;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000115.1 Protein Homology CDS 22 923 . - 2 ID=cds-WP_103852365.1-5;Parent=gene-AD11_RS10160;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS10160;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000115.1 RefSeq pseudogene 1260 1784 . - . ID=gene-AD11_RS10170;Name=AD11_RS10170;end_range=1784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10170;partial=true;pseudo=true NZ_JJLL01000115.1 Protein Homology CDS 1260 1784 . - 0 ID=cds-AD11_RS10170;Parent=gene-AD11_RS10170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416019.1;locus_tag=AD11_RS10170;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_JJLL01000115.1 RefSeq pseudogene 1783 2247 . - . ID=gene-AD11_RS28980;Name=AD11_RS28980;end_range=2247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS28980;partial=true;pseudo=true;start_range=.,1783 NZ_JJLL01000115.1 Protein Homology CDS 1783 2247 . - 0 ID=cds-AD11_RS28980;Parent=gene-AD11_RS28980;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=2247,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AD11_RS28980;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;start_range=.,1783;transl_table=11 NZ_JJLL01000115.1 RefSeq pseudogene 2502 2710 . - . ID=gene-AD11_RS10175;Name=AD11_RS10175;end_range=2710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10175;partial=true;pseudo=true NZ_JJLL01000115.1 Protein Homology CDS 2502 2710 . - 0 ID=cds-AD11_RS10175;Parent=gene-AD11_RS10175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=2710,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=AD11_RS10175;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000115.1 RefSeq gene 3432 4472 . + . ID=gene-AD11_RS10180;Name=AD11_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10180;old_locus_tag=AD11_1453 NZ_JJLL01000115.1 GeneMarkS-2+ CDS 3432 4472 . + 0 ID=cds-WP_033865425.1;Parent=gene-AD11_RS10180;Dbxref=GenBank:WP_033865425.1;Name=WP_033865425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS10180;product=hypothetical protein;protein_id=WP_033865425.1;transl_table=11 NZ_JJLL01000115.1 RefSeq gene 4990 5211 . - . ID=gene-AD11_RS10185;Name=AD11_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10185 NZ_JJLL01000115.1 GeneMarkS-2+ CDS 4990 5211 . - 0 ID=cds-WP_033865427.1;Parent=gene-AD11_RS10185;Dbxref=GenBank:WP_033865427.1;Name=WP_033865427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS10185;product=hypothetical protein;protein_id=WP_033865427.1;transl_table=11 NZ_JJLL01000115.1 RefSeq pseudogene 5259 5600 . - . ID=gene-AD11_RS10190;Name=AD11_RS10190;end_range=5600,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10190;old_locus_tag=AD11_1454;partial=true;pseudo=true NZ_JJLL01000115.1 Protein Homology CDS 5259 5600 . - 0 ID=cds-AD11_RS10190;Parent=gene-AD11_RS10190;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5600,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS10190;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000116.1 1 23354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000116.1 RefSeq region 1 23354 . + . ID=NZ_JJLL01000116.1:1..23354;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000116.1 RefSeq pseudogene 1 716 . - . ID=gene-AD11_RS30665;Name=AD11_RS30665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30665;old_locus_tag=AD11_1455;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000116.1 Protein Homology CDS 1 716 . - 0 ID=cds-AD11_RS30665;Parent=gene-AD11_RS30665;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017195.6;locus_tag=AD11_RS30665;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 777 1019 . - . ID=gene-AD11_RS10195;Name=AD11_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10195;old_locus_tag=AD11_1456 NZ_JJLL01000116.1 Protein Homology CDS 777 1019 . - 0 ID=cds-WP_032179868.1-4;Parent=gene-AD11_RS10195;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AD11_RS10195;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 1044 1214 . - . ID=gene-AD11_RS32050;Name=AD11_RS32050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32050;old_locus_tag=AD11_1457 NZ_JJLL01000116.1 Protein Homology CDS 1044 1214 . - 0 ID=cds-WP_164723201.1-4;Parent=gene-AD11_RS32050;Dbxref=GenBank:WP_164723201.1;Name=WP_164723201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AD11_RS32050;product=hypothetical protein;protein_id=WP_164723201.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 1207 1347 . - . ID=gene-AD11_RS32055;Name=AD11_RS32055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32055;old_locus_tag=AD11_1458 NZ_JJLL01000116.1 Protein Homology CDS 1207 1347 . - 0 ID=cds-WP_001422058.1-4;Parent=gene-AD11_RS32055;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AD11_RS32055;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 1352 1777 . - . ID=gene-AD11_RS10200;Name=AD11_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10200;old_locus_tag=AD11_1459 NZ_JJLL01000116.1 Protein Homology CDS 1352 1777 . - 0 ID=cds-WP_032179869.1;Parent=gene-AD11_RS10200;Dbxref=GenBank:WP_032179869.1;Name=WP_032179869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AD11_RS10200;product=hypothetical protein;protein_id=WP_032179869.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 1808 3808 . - . ID=gene-AD11_RS10205;Name=AD11_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10205;old_locus_tag=AD11_1460 NZ_JJLL01000116.1 Protein Homology CDS 1808 3808 . - 0 ID=cds-WP_033866371.1;Parent=gene-AD11_RS10205;Dbxref=GenBank:WP_033866371.1;Name=WP_033866371.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575774.1;locus_tag=AD11_RS10205;product=replication endonuclease;protein_id=WP_033866371.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 3801 4049 . - . ID=gene-AD11_RS10210;Name=AD11_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10210;old_locus_tag=AD11_1461 NZ_JJLL01000116.1 GeneMarkS-2+ CDS 3801 4049 . - 0 ID=cds-WP_044697014.1;Parent=gene-AD11_RS10210;Dbxref=GenBank:WP_044697014.1;Name=WP_044697014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS10210;product=hypothetical protein;protein_id=WP_044697014.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 4183 4383 . + . ID=gene-AD11_RS10215;Name=AD11_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10215 NZ_JJLL01000116.1 Protein Homology CDS 4183 4383 . + 0 ID=cds-WP_001409658.1;Parent=gene-AD11_RS10215;Dbxref=GenBank:WP_001409658.1;Name=WP_001409658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001409658.1;locus_tag=AD11_RS10215;product=hypothetical protein;protein_id=WP_001409658.1;transl_table=11 NZ_JJLL01000116.1 RefSeq pseudogene 4778 4981 . - . ID=gene-AD11_RS10225;Name=AD11_RS10225;end_range=4981,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10225;partial=true;pseudo=true NZ_JJLL01000116.1 Protein Homology CDS 4778 4981 . - 0 ID=cds-AD11_RS10225;Parent=gene-AD11_RS10225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AD11_RS10225;partial=true;product=type II toxin-antitoxin system HipA family toxin;pseudo=true;transl_table=11 NZ_JJLL01000116.1 RefSeq pseudogene 5208 5300 . - . ID=gene-AD11_RS33165;Name=AD11_RS33165;end_range=5300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33165;old_locus_tag=AD11_1463;partial=true;pseudo=true NZ_JJLL01000116.1 Protein Homology CDS 5208 5300 . - 0 ID=cds-AD11_RS33165;Parent=gene-AD11_RS33165;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;end_range=5300,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545609.1;locus_tag=AD11_RS33165;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000116.1 RefSeq pseudogene 5304 7978 . - . ID=gene-AD11_RS29000;Name=AD11_RS29000;end_range=7978,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29000;old_locus_tag=AD11_1464;partial=true;pseudo=true;start_range=.,5304 NZ_JJLL01000116.1 Protein Homology CDS 5304 7978 . - 0 ID=cds-AD11_RS29000;Parent=gene-AD11_RS29000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AD11_RS29000;partial=true;product=autotransporter-associated beta strand repeat-containing protein;pseudo=true;start_range=.,5304;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 8429 10021 . - . ID=gene-AD11_RS10235;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AD11_RS10235;old_locus_tag=AD11_1465 NZ_JJLL01000116.1 Protein Homology CDS 8429 10021 . - 0 ID=cds-WP_033865430.1;Parent=gene-AD11_RS10235;Dbxref=GenBank:WP_033865430.1;Name=WP_033865430.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AD11_RS10235;product=autoinducer-2 kinase;protein_id=WP_033865430.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 10100 11053 . - . ID=gene-AD11_RS10240;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AD11_RS10240;old_locus_tag=AD11_1466 NZ_JJLL01000116.1 Protein Homology CDS 10100 11053 . - 0 ID=cds-WP_000154339.1;Parent=gene-AD11_RS10240;Dbxref=GenBank:WP_000154339.1;Name=WP_000154339.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707462.1;locus_tag=AD11_RS10240;product=transcriptional regulator LsrR;protein_id=WP_000154339.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 11302 12837 . + . ID=gene-AD11_RS10245;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AD11_RS10245;old_locus_tag=AD11_1467 NZ_JJLL01000116.1 Protein Homology CDS 11302 12837 . + 0 ID=cds-WP_001194860.1;Parent=gene-AD11_RS10245;Dbxref=GenBank:WP_001194860.1;Name=WP_001194860.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AD11_RS10245;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_001194860.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 12831 13859 . + . ID=gene-AD11_RS10250;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AD11_RS10250;old_locus_tag=AD11_1468 NZ_JJLL01000116.1 Protein Homology CDS 12831 13859 . + 0 ID=cds-WP_000911184.1;Parent=gene-AD11_RS10250;Dbxref=GenBank:WP_000911184.1;Name=WP_000911184.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AD11_RS10250;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911184.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 13859 14851 . + . ID=gene-AD11_RS10255;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AD11_RS10255;old_locus_tag=AD11_1469 NZ_JJLL01000116.1 Protein Homology CDS 13859 14851 . + 0 ID=cds-WP_001222721.1;Parent=gene-AD11_RS10255;Dbxref=GenBank:WP_001222721.1;Name=WP_001222721.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AD11_RS10255;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001222721.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 14863 15885 . + . ID=gene-AD11_RS10260;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AD11_RS10260;old_locus_tag=AD11_1470 NZ_JJLL01000116.1 Protein Homology CDS 14863 15885 . + 0 ID=cds-WP_000172488.1;Parent=gene-AD11_RS10260;Dbxref=GenBank:WP_000172488.1;Name=WP_000172488.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AD11_RS10260;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172488.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 15912 16787 . + . ID=gene-AD11_RS10265;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AD11_RS10265;old_locus_tag=AD11_1471 NZ_JJLL01000116.1 Protein Homology CDS 15912 16787 . + 0 ID=cds-WP_000774189.1;Parent=gene-AD11_RS10265;Dbxref=GenBank:WP_000774189.1;Name=WP_000774189.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310151.1;locus_tag=AD11_RS10265;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774189.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 16811 17101 . + . ID=gene-AD11_RS10270;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AD11_RS10270;old_locus_tag=AD11_1472 NZ_JJLL01000116.1 Protein Homology CDS 16811 17101 . + 0 ID=cds-WP_000558527.1;Parent=gene-AD11_RS10270;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AD11_RS10270;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JJLL01000116.1 RefSeq pseudogene 17158 17915 . + . ID=gene-AD11_RS10275;Name=tam;gbkey=Gene;gene=tam;gene_biotype=pseudogene;locus_tag=AD11_RS10275;pseudo=true NZ_JJLL01000116.1 Protein Homology CDS 17158 17915 . + 0 ID=cds-AD11_RS10275;Parent=gene-AD11_RS10275;Note=frameshifted;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AD11_RS10275;product=trans-aconitate 2-methyltransferase;pseudo=true;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 17919 18833 . - . ID=gene-AD11_RS10280;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=AD11_RS10280;old_locus_tag=AD11_1475 NZ_JJLL01000116.1 Protein Homology CDS 17919 18833 . - 0 ID=cds-WP_001313828.1;Parent=gene-AD11_RS10280;Dbxref=GenBank:WP_001313828.1;Name=WP_001313828.1;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AD11_RS10280;product=bestrophin family protein;protein_id=WP_001313828.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 19040 20491 . - . ID=gene-AD11_RS10290;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AD11_RS10290;old_locus_tag=AD11_1476 NZ_JJLL01000116.1 Protein Homology CDS 19040 20491 . - 0 ID=cds-WP_000854633.1;Parent=gene-AD11_RS10290;Dbxref=GenBank:WP_000854633.1;Name=WP_000854633.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AD11_RS10290;product=tagaturonate reductase;protein_id=WP_000854633.1;transl_table=11 NZ_JJLL01000116.1 RefSeq pseudogene 20718 21704 . - . ID=gene-AD11_RS10295;Name=dgcF;end_range=21704,.;gbkey=Gene;gene=dgcF;gene_biotype=pseudogene;locus_tag=AD11_RS10295;old_locus_tag=AD11_1478;partial=true;pseudo=true NZ_JJLL01000116.1 Protein Homology CDS 20718 21704 . - 0 ID=cds-AD11_RS10295;Parent=gene-AD11_RS10295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;end_range=21704,.;gbkey=CDS;gene=dgcF;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AD11_RS10295;partial=true;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 21777 22136 . - . ID=gene-AD11_RS10300;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AD11_RS10300;old_locus_tag=AD11_1479 NZ_JJLL01000116.1 Protein Homology CDS 21777 22136 . - 0 ID=cds-WP_001191019.1;Parent=gene-AD11_RS10300;Dbxref=GenBank:WP_001191019.1;Name=WP_001191019.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AD11_RS10300;product=DUF4186 domain-containing protein;protein_id=WP_001191019.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 22136 23062 . - . ID=gene-AD11_RS10305;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AD11_RS10305;old_locus_tag=AD11_1480 NZ_JJLL01000116.1 Protein Homology CDS 22136 23062 . - 0 ID=cds-WP_000257409.1;Parent=gene-AD11_RS10305;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AD11_RS10305;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JJLL01000116.1 RefSeq gene 23126 23354 . - . ID=gene-AD11_RS10310;Name=AD11_RS10310;end_range=23354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10310;old_locus_tag=AD11_1481;partial=true NZ_JJLL01000116.1 Protein Homology CDS 23126 23354 . - 1 ID=cds-WP_033866372.1;Parent=gene-AD11_RS10310;Dbxref=GenBank:WP_033866372.1;Name=WP_033866372.1;Ontology_term=GO:0016491;end_range=23354,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AD11_RS10310;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_033866372.1;transl_table=11 ##sequence-region NZ_JJLL01000117.1 1 3525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000117.1 RefSeq region 1 3525 . + . ID=NZ_JJLL01000117.1:1..3525;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000117.1 RefSeq gene 11 370 . - . ID=gene-AD11_RS10315;Name=AD11_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10315;old_locus_tag=AD11_1482 NZ_JJLL01000117.1 Protein Homology CDS 11 370 . - 0 ID=cds-WP_001191019.1-2;Parent=gene-AD11_RS10315;Dbxref=GenBank:WP_001191019.1;Name=WP_001191019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AD11_RS10315;product=DUF4186 domain-containing protein;protein_id=WP_001191019.1;transl_table=11 NZ_JJLL01000117.1 RefSeq gene 370 1296 . - . ID=gene-AD11_RS10320;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AD11_RS10320;old_locus_tag=AD11_1483 NZ_JJLL01000117.1 Protein Homology CDS 370 1296 . - 0 ID=cds-WP_000257409.1-2;Parent=gene-AD11_RS10320;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AD11_RS10320;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JJLL01000117.1 RefSeq pseudogene 1360 1710 . - . ID=gene-AD11_RS10325;Name=AD11_RS10325;end_range=1710,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10325;old_locus_tag=AD11_1484;partial=true;pseudo=true NZ_JJLL01000117.1 Protein Homology CDS 1360 1710 . - 0 ID=cds-AD11_RS10325;Parent=gene-AD11_RS10325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491;end_range=1710,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AD11_RS10325;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 NZ_JJLL01000117.1 RefSeq pseudogene 1760 1954 . - . ID=gene-AD11_RS33020;Name=AD11_RS33020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33020;partial=true;pseudo=true;start_range=.,1760 NZ_JJLL01000117.1 Protein Homology CDS 1760 1954 . - 0 ID=cds-AD11_RS33020;Parent=gene-AD11_RS33020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.6;locus_tag=AD11_RS33020;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,1760;transl_table=11 NZ_JJLL01000117.1 RefSeq pseudogene 1929 2123 . - . ID=gene-AD11_RS33170;Name=AD11_RS33170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33170;partial=true;pseudo=true;start_range=.,1929 NZ_JJLL01000117.1 Protein Homology CDS 1929 2123 . - 0 ID=cds-AD11_RS33170;Parent=gene-AD11_RS33170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.6;locus_tag=AD11_RS33170;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,1929;transl_table=11 NZ_JJLL01000117.1 RefSeq pseudogene 2041 3255 . - . ID=gene-AD11_RS10330;Name=sad;gbkey=Gene;gene=sad;gene_biotype=pseudogene;locus_tag=AD11_RS10330;old_locus_tag=AD11_1485;partial=true;pseudo=true;start_range=.,2041 NZ_JJLL01000117.1 Protein Homology CDS 2041 3255 . - 0 ID=cds-AD11_RS10330;Parent=gene-AD11_RS10330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AD11_RS10330;partial=true;product=succinate-semialdehyde dehydrogenase;pseudo=true;start_range=.,2041;transl_table=11 NZ_JJLL01000117.1 RefSeq gene 3356 3525 . + . ID=gene-AD11_RS10335;Name=AD11_RS10335;end_range=3525,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10335;old_locus_tag=AD11_1486;partial=true NZ_JJLL01000117.1 Protein Homology CDS 3356 3525 . + 0 ID=cds-WP_033866188.1-2;Parent=gene-AD11_RS10335;Dbxref=GenBank:WP_033866188.1;Name=WP_033866188.1;Ontology_term=GO:0006355,GO:0003700;end_range=3525,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AD11_RS10335;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_033866188.1;transl_table=11 ##sequence-region NZ_JJLL01000118.1 1 29586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000118.1 RefSeq region 1 29586 . + . ID=NZ_JJLL01000118.1:1..29586;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000118.1 RefSeq gene 1 1088 . - . ID=gene-AD11_RS10340;Name=AD11_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10340;old_locus_tag=AD11_1487;partial=true;start_range=.,1 NZ_JJLL01000118.1 Protein Homology CDS 1 1088 . - 0 ID=cds-WP_033866376.1;Parent=gene-AD11_RS10340;Dbxref=GenBank:WP_033866376.1;Name=WP_033866376.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AD11_RS10340;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_033866376.1;start_range=.,1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 1189 2070 . + . ID=gene-AD11_RS10345;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AD11_RS10345;old_locus_tag=AD11_1488 NZ_JJLL01000118.1 Protein Homology CDS 1189 2070 . + 0 ID=cds-WP_000366501.1;Parent=gene-AD11_RS10345;Dbxref=GenBank:WP_000366501.1;Name=WP_000366501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AD11_RS10345;product=putrescine utilization regulator PtrR;protein_id=WP_000366501.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 2148 3263 . + . ID=gene-AD11_RS10350;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;locus_tag=AD11_RS10350;old_locus_tag=AD11_1489 NZ_JJLL01000118.1 Protein Homology CDS 2148 3263 . + 0 ID=cds-WP_001619462.1;Parent=gene-AD11_RS10350;Dbxref=GenBank:WP_001619462.1;Name=WP_001619462.1;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=AD11_RS10350;product=putative protein YneK;protein_id=WP_001619462.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 3413 4603 . + . ID=gene-AD11_RS10355;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AD11_RS10355;old_locus_tag=AD11_1491 NZ_JJLL01000118.1 Protein Homology CDS 3413 4603 . + 0 ID=cds-WP_000210799.1;Parent=gene-AD11_RS10355;Dbxref=GenBank:WP_000210799.1;Name=WP_000210799.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AD11_RS10355;product=L-arabinose MFS transporter;protein_id=WP_000210799.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 4628 5293 . - . ID=gene-AD11_RS10360;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AD11_RS10360;old_locus_tag=AD11_1492 NZ_JJLL01000118.1 Protein Homology CDS 4628 5293 . - 0 ID=cds-WP_000885033.1;Parent=gene-AD11_RS10360;Dbxref=GenBank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AD11_RS10360;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 5505 5939 . + . ID=gene-AD11_RS10365;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AD11_RS10365;old_locus_tag=AD11_1493 NZ_JJLL01000118.1 Protein Homology CDS 5505 5939 . + 0 ID=cds-WP_000843419.1;Parent=gene-AD11_RS10365;Dbxref=GenBank:WP_000843419.1;Name=WP_000843419.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310164.2;locus_tag=AD11_RS10365;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843419.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 5959 6342 . + . ID=gene-AD11_RS10370;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AD11_RS10370;old_locus_tag=AD11_1494 NZ_JJLL01000118.1 Protein Homology CDS 5959 6342 . + 0 ID=cds-WP_000091199.1;Parent=gene-AD11_RS10370;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AD11_RS10370;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 6374 6592 . + . ID=gene-AD11_RS10375;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AD11_RS10375;old_locus_tag=AD11_1495 NZ_JJLL01000118.1 Protein Homology CDS 6374 6592 . + 0 ID=cds-WP_000803659.1;Parent=gene-AD11_RS10375;Dbxref=GenBank:WP_000803659.1;Name=WP_000803659.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AD11_RS10375;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803659.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 6623 7522 . - . ID=gene-AD11_RS10380;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AD11_RS10380;old_locus_tag=AD11_1496 NZ_JJLL01000118.1 Protein Homology CDS 6623 7522 . - 0 ID=cds-WP_000087214.1;Parent=gene-AD11_RS10380;Dbxref=GenBank:WP_000087214.1;Name=WP_000087214.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416050.4;locus_tag=AD11_RS10380;product=O-acetylserine/cysteine exporter;protein_id=WP_000087214.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 7717 8904 . + . ID=gene-AD11_RS10385;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AD11_RS10385;old_locus_tag=AD11_1498 NZ_JJLL01000118.1 Protein Homology CDS 7717 8904 . + 0 ID=cds-WP_001054207.1;Parent=gene-AD11_RS10385;Dbxref=GenBank:WP_001054207.1;Name=WP_001054207.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AD11_RS10385;product=efflux MFS transporter YdeE;protein_id=WP_001054207.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 9031 9126 . + . ID=gene-AD11_RS10390;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AD11_RS10390 NZ_JJLL01000118.1 Protein Homology CDS 9031 9126 . + 0 ID=cds-WP_000901367.1;Parent=gene-AD11_RS10390;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AD11_RS10390;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 9126 9230 . + . ID=gene-AD11_RS32520;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=AD11_RS32520 NZ_JJLL01000118.1 Protein Homology CDS 9126 9230 . + 0 ID=cds-WP_211180496.1;Parent=gene-AD11_RS32520;Dbxref=GenBank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AD11_RS32520;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 9345 10235 . - . ID=gene-AD11_RS10395;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AD11_RS10395;old_locus_tag=AD11_1499 NZ_JJLL01000118.1 Protein Homology CDS 9345 10235 . - 0 ID=cds-WP_000592802.1;Parent=gene-AD11_RS10395;Dbxref=GenBank:WP_000592802.1;Name=WP_000592802.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AD11_RS10395;product=diguanylate cyclase DgcZ;protein_id=WP_000592802.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 10490 10882 . - . ID=gene-AD11_RS10400;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AD11_RS10400;old_locus_tag=AD11_1500 NZ_JJLL01000118.1 Protein Homology CDS 10490 10882 . - 0 ID=cds-WP_000671737.1;Parent=gene-AD11_RS10400;Dbxref=GenBank:WP_000671737.1;Name=WP_000671737.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AD11_RS10400;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671737.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 11161 11679 . + . ID=gene-AD11_RS10405;Name=AD11_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10405;old_locus_tag=AD11_1501 NZ_JJLL01000118.1 Protein Homology CDS 11161 11679 . + 0 ID=cds-WP_001400358.1;Parent=gene-AD11_RS10405;Dbxref=GenBank:WP_001400358.1;Name=WP_001400358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707440.1;locus_tag=AD11_RS10405;product=2-oxo-tetronate isomerase;protein_id=WP_001400358.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 11724 13769 . - . ID=gene-AD11_RS10410;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AD11_RS10410;old_locus_tag=AD11_1502 NZ_JJLL01000118.1 Protein Homology CDS 11724 13769 . - 0 ID=cds-WP_001619465.1;Parent=gene-AD11_RS10410;Dbxref=GenBank:WP_001619465.1;Name=WP_001619465.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416056.1;locus_tag=AD11_RS10410;product=peptidyl-dipeptidase Dcp;protein_id=WP_001619465.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 13906 14652 . + . ID=gene-AD11_RS10415;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AD11_RS10415;old_locus_tag=AD11_1503 NZ_JJLL01000118.1 Protein Homology CDS 13906 14652 . + 0 ID=cds-WP_000636571.1;Parent=gene-AD11_RS10415;Dbxref=GenBank:WP_000636571.1;Name=WP_000636571.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=AD11_RS10415;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 14741 15427 . + . ID=gene-AD11_RS10420;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AD11_RS10420;old_locus_tag=AD11_1504 NZ_JJLL01000118.1 Protein Homology CDS 14741 15427 . + 0 ID=cds-WP_000215549.1;Parent=gene-AD11_RS10420;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AD11_RS10420;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 15604 15807 . + . ID=gene-AD11_RS10425;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AD11_RS10425;old_locus_tag=AD11_1505 NZ_JJLL01000118.1 Protein Homology CDS 15604 15807 . + 0 ID=cds-WP_000214712.1;Parent=gene-AD11_RS10425;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AD11_RS10425;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 15842 17302 . - . ID=gene-AD11_RS10430;Name=AD11_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10430;old_locus_tag=AD11_1506 NZ_JJLL01000118.1 Protein Homology CDS 15842 17302 . - 0 ID=cds-WP_000527809.1;Parent=gene-AD11_RS10430;Dbxref=GenBank:WP_000527809.1;Name=WP_000527809.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416060.1;locus_tag=AD11_RS10430;product=mannitol dehydrogenase family protein;protein_id=WP_000527809.1;transl_table=11 NZ_JJLL01000118.1 RefSeq pseudogene 17391 18674 . - . ID=gene-AD11_RS10435;Name=ydfJ;end_range=18674,.;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;locus_tag=AD11_RS10435;old_locus_tag=AD11_1507;partial=true;pseudo=true NZ_JJLL01000118.1 Protein Homology CDS 17391 18674 . - 0 ID=cds-AD11_RS10435;Parent=gene-AD11_RS10435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18674,.;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AD11_RS10435;partial=true;product=MHS family MFS transporter YdfJ;pseudo=true;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 19279 19392 . + . ID=gene-AD11_RS31540;Name=AD11_RS31540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31540 NZ_JJLL01000118.1 Protein Homology CDS 19279 19392 . + 0 ID=cds-WP_122985608.1;Parent=gene-AD11_RS31540;Dbxref=GenBank:WP_122985608.1;Name=WP_122985608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518779.1;locus_tag=AD11_RS31540;product=YnaM/YnfT family protein;protein_id=WP_122985608.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 19461 19694 . + . ID=gene-AD11_RS10440;Name=ydfK;gbkey=Gene;gene=ydfK;gene_biotype=protein_coding;locus_tag=AD11_RS10440;old_locus_tag=AD11_1508 NZ_JJLL01000118.1 Protein Homology CDS 19461 19694 . + 0 ID=cds-WP_000836768.1;Parent=gene-AD11_RS10440;Dbxref=GenBank:WP_000836768.1;Name=WP_000836768.1;gbkey=CDS;gene=ydfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416062.2;locus_tag=AD11_RS10440;product=cold shock protein YdfK;protein_id=WP_000836768.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 20012 20602 . + . ID=gene-AD11_RS10445;Name=AD11_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10445;old_locus_tag=AD11_1509 NZ_JJLL01000118.1 Protein Homology CDS 20012 20602 . + 0 ID=cds-WP_000086527.1;Parent=gene-AD11_RS10445;Dbxref=GenBank:WP_000086527.1;Name=WP_000086527.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415892.1;locus_tag=AD11_RS10445;product=recombinase family protein;protein_id=WP_000086527.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 20700 21275 . - . ID=gene-AD11_RS10450;Name=AD11_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10450;old_locus_tag=AD11_1510 NZ_JJLL01000118.1 Protein Homology CDS 20700 21275 . - 0 ID=cds-WP_000885587.1;Parent=gene-AD11_RS10450;Dbxref=GenBank:WP_000885587.1;Name=WP_000885587.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416064.1;locus_tag=AD11_RS10450;product=tail fiber assembly protein;protein_id=WP_000885587.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 21275 24298 . - . ID=gene-AD11_RS29025;Name=AD11_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS29025 NZ_JJLL01000118.1 Protein Homology CDS 21275 24298 . - 0 ID=cds-WP_071998692.1;Parent=gene-AD11_RS29025;Dbxref=GenBank:WP_071998692.1;Name=WP_071998692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569831.1;locus_tag=AD11_RS29025;product=phage tail protein;protein_id=WP_071998692.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 24363 24962 . - . ID=gene-AD11_RS10470;Name=AD11_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10470;old_locus_tag=AD11_1516 NZ_JJLL01000118.1 Protein Homology CDS 24363 24962 . - 0 ID=cds-WP_001230364.1;Parent=gene-AD11_RS10470;Dbxref=GenBank:WP_001230364.1;Name=WP_001230364.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AD11_RS10470;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001230364.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 25029 28427 . - . ID=gene-AD11_RS10475;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AD11_RS10475;old_locus_tag=AD11_1517 NZ_JJLL01000118.1 Protein Homology CDS 25029 28427 . - 0 ID=cds-WP_033865434.1;Parent=gene-AD11_RS10475;Dbxref=GenBank:WP_033865434.1;Name=WP_033865434.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=AD11_RS10475;product=phage attachment tail tip protein J;protein_id=WP_033865434.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 28488 29135 . - . ID=gene-AD11_RS10480;Name=AD11_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10480;old_locus_tag=AD11_1518 NZ_JJLL01000118.1 Protein Homology CDS 28488 29135 . - 0 ID=cds-WP_023277304.1;Parent=gene-AD11_RS10480;Dbxref=GenBank:WP_023277304.1;Name=WP_023277304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461526.1;locus_tag=AD11_RS10480;product=tail assembly protein;protein_id=WP_023277304.1;transl_table=11 NZ_JJLL01000118.1 RefSeq gene 29033 29586 . - . ID=gene-AD11_RS10485;Name=AD11_RS10485;end_range=29586,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10485;old_locus_tag=AD11_1519;partial=true NZ_JJLL01000118.1 Protein Homology CDS 29033 29586 . - 2 ID=cds-WP_033866377.1;Parent=gene-AD11_RS10485;Dbxref=GenBank:WP_033866377.1;Name=WP_033866377.1;end_range=29586,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AD11_RS10485;partial=true;product=NlpC/P60 family protein;protein_id=WP_033866377.1;transl_table=11 ##sequence-region NZ_JJLL01000119.1 1 13752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000119.1 RefSeq region 1 13752 . + . ID=NZ_JJLL01000119.1:1..13752;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000119.1 RefSeq gene 1 382 . - . ID=gene-AD11_RS10490;Name=AD11_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10490;partial=true;start_range=.,1 NZ_JJLL01000119.1 Protein Homology CDS 1 382 . - 0 ID=cds-WP_033866378.1;Parent=gene-AD11_RS10490;Dbxref=GenBank:WP_033866378.1;Name=WP_033866378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AD11_RS10490;partial=true;product=C40 family peptidase;protein_id=WP_033866378.1;start_range=.,1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 387 1085 . - . ID=gene-AD11_RS10495;Name=AD11_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10495;old_locus_tag=AD11_1521 NZ_JJLL01000119.1 Protein Homology CDS 387 1085 . - 0 ID=cds-WP_020219025.1;Parent=gene-AD11_RS10495;Dbxref=GenBank:WP_020219025.1;Name=WP_020219025.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308866.1;locus_tag=AD11_RS10495;product=phage minor tail protein L;protein_id=WP_020219025.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 1095 1424 . - . ID=gene-AD11_RS10500;Name=AD11_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10500;old_locus_tag=AD11_1522 NZ_JJLL01000119.1 Protein Homology CDS 1095 1424 . - 0 ID=cds-WP_000447253.1;Parent=gene-AD11_RS10500;Dbxref=GenBank:WP_000447253.1;Name=WP_000447253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308865.1;locus_tag=AD11_RS10500;product=phage tail protein;protein_id=WP_000447253.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 1424 4489 . - . ID=gene-AD11_RS10505;Name=AD11_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10505;old_locus_tag=AD11_1523 NZ_JJLL01000119.1 Protein Homology CDS 1424 4489 . - 0 ID=cds-WP_033865435.1;Parent=gene-AD11_RS10505;Dbxref=GenBank:WP_033865435.1;Name=WP_033865435.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308864.1;locus_tag=AD11_RS10505;product=phage tail tape measure protein;protein_id=WP_033865435.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 4461 4790 . - . ID=gene-AD11_RS10510;Name=AD11_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10510;old_locus_tag=AD11_1524 NZ_JJLL01000119.1 Protein Homology CDS 4461 4790 . - 0 ID=cds-WP_001161009.1;Parent=gene-AD11_RS10510;Dbxref=GenBank:WP_001161009.1;Name=WP_001161009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308863.1;locus_tag=AD11_RS10510;product=phage tail assembly protein T;protein_id=WP_001161009.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 4799 5185 . - . ID=gene-AD11_RS10515;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=AD11_RS10515;old_locus_tag=AD11_1525 NZ_JJLL01000119.1 Protein Homology CDS 4799 5185 . - 0 ID=cds-WP_001297778.1;Parent=gene-AD11_RS10515;Dbxref=GenBank:WP_001297778.1;Name=WP_001297778.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308862.1;locus_tag=AD11_RS10515;product=phage tail assembly chaperone G;protein_id=WP_001297778.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 5246 5989 . - . ID=gene-AD11_RS10520;Name=AD11_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10520;old_locus_tag=AD11_1526 NZ_JJLL01000119.1 Protein Homology CDS 5246 5989 . - 0 ID=cds-WP_000211109.1;Parent=gene-AD11_RS10520;Dbxref=GenBank:WP_000211109.1;Name=WP_000211109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308861.1;locus_tag=AD11_RS10520;product=phage tail protein;protein_id=WP_000211109.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 6001 6402 . - . ID=gene-AD11_RS10525;Name=AD11_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10525;old_locus_tag=AD11_1527 NZ_JJLL01000119.1 Protein Homology CDS 6001 6402 . - 0 ID=cds-WP_001079398.1;Parent=gene-AD11_RS10525;Dbxref=GenBank:WP_001079398.1;Name=WP_001079398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707741.1;locus_tag=AD11_RS10525;product=phage minor tail U family protein;protein_id=WP_001079398.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 6399 6977 . - . ID=gene-AD11_RS10530;Name=AD11_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10530;old_locus_tag=AD11_1528 NZ_JJLL01000119.1 Protein Homology CDS 6399 6977 . - 0 ID=cds-WP_020219021.1;Parent=gene-AD11_RS10530;Dbxref=GenBank:WP_020219021.1;Name=WP_020219021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308859.1;locus_tag=AD11_RS10530;product=phage tail protein;protein_id=WP_020219021.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 6989 7264 . - . ID=gene-AD11_RS10535;Name=AD11_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10535;old_locus_tag=AD11_1529 NZ_JJLL01000119.1 Protein Homology CDS 6989 7264 . - 0 ID=cds-WP_001283153.1;Parent=gene-AD11_RS10535;Dbxref=GenBank:WP_001283153.1;Name=WP_001283153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308858.1;locus_tag=AD11_RS10535;product=DNA breaking-rejoining protein;protein_id=WP_001283153.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 7257 7580 . - . ID=gene-AD11_RS10540;Name=AD11_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10540;old_locus_tag=AD11_1530 NZ_JJLL01000119.1 Protein Homology CDS 7257 7580 . - 0 ID=cds-WP_001097050.1;Parent=gene-AD11_RS10540;Dbxref=GenBank:WP_001097050.1;Name=WP_001097050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308857.2;locus_tag=AD11_RS10540;product=DUF2190 family protein;protein_id=WP_001097050.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 7667 9694 . - . ID=gene-AD11_RS10545;Name=AD11_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10545;old_locus_tag=AD11_1531 NZ_JJLL01000119.1 Protein Homology CDS 7667 9694 . - 0 ID=cds-WP_001136587.1;Parent=gene-AD11_RS10545;Dbxref=GenBank:WP_001136587.1;Name=WP_001136587.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308856.2;locus_tag=AD11_RS10545;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_001136587.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 9639 11147 . - . ID=gene-AD11_RS10550;Name=AD11_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10550;old_locus_tag=AD11_1532 NZ_JJLL01000119.1 Protein Homology CDS 9639 11147 . - 0 ID=cds-WP_000985953.1;Parent=gene-AD11_RS10550;Dbxref=GenBank:WP_000985953.1;Name=WP_000985953.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310988.1;locus_tag=AD11_RS10550;product=phage portal protein;protein_id=WP_000985953.1;transl_table=11 NZ_JJLL01000119.1 RefSeq gene 11147 11359 . - . ID=gene-AD11_RS10555;Name=AD11_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10555;old_locus_tag=AD11_1533 NZ_JJLL01000119.1 Protein Homology CDS 11147 11359 . - 0 ID=cds-WP_001072975.1;Parent=gene-AD11_RS10555;Dbxref=GenBank:WP_001072975.1;Name=WP_001072975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072975.1;locus_tag=AD11_RS10555;product=hypothetical protein;protein_id=WP_001072975.1;transl_table=11 NZ_JJLL01000119.1 RefSeq pseudogene 11356 13185 . - . ID=gene-AD11_RS10560;Name=AD11_RS10560;end_range=13185,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10560;old_locus_tag=AD11_1534;partial=true;pseudo=true NZ_JJLL01000119.1 Protein Homology CDS 11356 13185 . - 0 ID=cds-AD11_RS10560;Parent=gene-AD11_RS10560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004519,GO:0005524,GO:0016887;end_range=13185,.;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308852.1;locus_tag=AD11_RS10560;partial=true;product=phage terminase large subunit family protein;pseudo=true;transl_table=11 NZ_JJLL01000119.1 RefSeq pseudogene 13233 13712 . - . ID=gene-AD11_RS10565;Name=AD11_RS10565;end_range=13712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10565;old_locus_tag=AD11_1535;partial=true;pseudo=true NZ_JJLL01000119.1 Protein Homology CDS 13233 13712 . - 0 ID=cds-AD11_RS10565;Parent=gene-AD11_RS10565;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=13712,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS10565;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000120.1 1 24095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000120.1 RefSeq region 1 24095 . + . ID=NZ_JJLL01000120.1:1..24095;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000120.1 RefSeq pseudogene 1 750 . - . ID=gene-AD11_RS31545;Name=AD11_RS31545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31545;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000120.1 Protein Homology CDS 1 750 . - 0 ID=cds-AD11_RS31545;Parent=gene-AD11_RS31545;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AD11_RS31545;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000120.1 cmsearch sequence_feature 353 469 . - . ID=id-AD11_RS31545;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS31545;pseudo=true NZ_JJLL01000120.1 RefSeq pseudogene 806 1072 . - . ID=gene-AD11_RS29030;Name=AD11_RS29030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29030;partial=true;pseudo=true;start_range=.,806 NZ_JJLL01000120.1 Protein Homology CDS 806 1072 . - 0 ID=cds-AD11_RS29030;Parent=gene-AD11_RS29030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015987600.1;locus_tag=AD11_RS29030;partial=true;product=phage terminase large subunit family protein;pseudo=true;start_range=.,806;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 1081 1608 . - . ID=gene-AD11_RS10585;Name=AD11_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10585 NZ_JJLL01000120.1 Protein Homology CDS 1081 1608 . - 0 ID=cds-WP_001389340.1;Parent=gene-AD11_RS10585;Dbxref=GenBank:WP_001389340.1;Name=WP_001389340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587084.1;locus_tag=AD11_RS10585;product=DUF1441 family protein;protein_id=WP_001389340.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 2181 2387 . - . ID=gene-AD11_RS10595;Name=AD11_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10595;old_locus_tag=AD11_1541 NZ_JJLL01000120.1 Protein Homology CDS 2181 2387 . - 0 ID=cds-WP_001031431.1;Parent=gene-AD11_RS10595;Dbxref=GenBank:WP_001031431.1;Name=WP_001031431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309654.1;locus_tag=AD11_RS10595;product=hypothetical protein;protein_id=WP_001031431.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 2688 3098 . + . ID=gene-AD11_RS10600;Name=AD11_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10600 NZ_JJLL01000120.1 Protein Homology CDS 2688 3098 . + 0 ID=cds-WP_000035574.1;Parent=gene-AD11_RS10600;Dbxref=GenBank:WP_000035574.1;Name=WP_000035574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309653.2;locus_tag=AD11_RS10600;product=DUF1398 domain-containing protein;protein_id=WP_000035574.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 3250 3423 . - . ID=gene-AD11_RS10605;Name=gnsB;gbkey=Gene;gene=gnsB;gene_biotype=protein_coding;locus_tag=AD11_RS10605;old_locus_tag=AD11_1542 NZ_JJLL01000120.1 Protein Homology CDS 3250 3423 . - 0 ID=cds-WP_001019606.1;Parent=gene-AD11_RS10605;Dbxref=GenBank:WP_001019606.1;Name=WP_001019606.1;gbkey=CDS;gene=gnsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416068.2;locus_tag=AD11_RS10605;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019606.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 3595 3825 . - . ID=gene-AD11_RS10610;Name=ynfN;gbkey=Gene;gene=ynfN;gene_biotype=protein_coding;locus_tag=AD11_RS10610 NZ_JJLL01000120.1 Protein Homology CDS 3595 3825 . - 0 ID=cds-WP_000720962.1;Parent=gene-AD11_RS10610;Dbxref=GenBank:WP_000720962.1;Name=WP_000720962.1;gbkey=CDS;gene=ynfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000720962.1;locus_tag=AD11_RS10610;product=protein YnfN;protein_id=WP_000720962.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 3830 3895 . - . ID=gene-AD11_RS31550;Name=ynfR;gbkey=Gene;gene=ynfR;gene_biotype=protein_coding;locus_tag=AD11_RS31550 NZ_JJLL01000120.1 Protein Homology CDS 3830 3895 . - 0 ID=cds-WP_122134696.1;Parent=gene-AD11_RS31550;Dbxref=GenBank:WP_122134696.1;Name=WP_122134696.1;gbkey=CDS;gene=ynfR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518789.1;locus_tag=AD11_RS31550;product=small protein YnfR;protein_id=WP_122134696.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 3898 4086 . - . ID=gene-AD11_RS29050;Name=ynfQ;gbkey=Gene;gene=ynfQ;gene_biotype=protein_coding;locus_tag=AD11_RS29050 NZ_JJLL01000120.1 Protein Homology CDS 3898 4086 . - 0 ID=cds-WP_071524604.1;Parent=gene-AD11_RS29050;Dbxref=GenBank:WP_071524604.1;Name=WP_071524604.1;gbkey=CDS;gene=ynfQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518790.1;locus_tag=AD11_RS29050;product=cold-shock protein;protein_id=WP_071524604.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 4097 4309 . - . ID=gene-AD11_RS10615;Name=cspI;gbkey=Gene;gene=cspI;gene_biotype=protein_coding;locus_tag=AD11_RS10615;old_locus_tag=AD11_1543 NZ_JJLL01000120.1 Protein Homology CDS 4097 4309 . - 0 ID=cds-WP_000066495.1;Parent=gene-AD11_RS10615;Dbxref=GenBank:WP_000066495.1;Name=WP_000066495.1;gbkey=CDS;gene=cspI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416070.1;locus_tag=AD11_RS10615;product=cold shock protein CspI;protein_id=WP_000066495.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 4673 5170 . - . ID=gene-AD11_RS10620;Name=rzpQ;gbkey=Gene;gene=rzpQ;gene_biotype=protein_coding;locus_tag=AD11_RS10620;old_locus_tag=AD11_1544 NZ_JJLL01000120.1 Protein Homology CDS 4673 5170 . - 0 ID=cds-WP_001071769.1;Parent=gene-AD11_RS10620;Dbxref=GenBank:WP_001071769.1;Name=WP_001071769.1;gbkey=CDS;gene=rzpQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416071.1;locus_tag=AD11_RS10620;product=DUF2514 domain-containing protein;protein_id=WP_001071769.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 5167 5700 . - . ID=gene-AD11_RS10625;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AD11_RS10625;old_locus_tag=AD11_1545 NZ_JJLL01000120.1 Protein Homology CDS 5167 5700 . - 0 ID=cds-WP_001092971.1;Parent=gene-AD11_RS10625;Dbxref=GenBank:WP_001092971.1;Name=WP_001092971.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416072.1;locus_tag=AD11_RS10625;product=lysozyme;protein_id=WP_001092971.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 5697 6008 . - . ID=gene-AD11_RS10630;Name=ydfR;gbkey=Gene;gene=ydfR;gene_biotype=protein_coding;locus_tag=AD11_RS10630;old_locus_tag=AD11_1546 NZ_JJLL01000120.1 Protein Homology CDS 5697 6008 . - 0 ID=cds-WP_000189915.1;Parent=gene-AD11_RS10630;Dbxref=GenBank:WP_000189915.1;Name=WP_000189915.1;gbkey=CDS;gene=ydfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416073.1;locus_tag=AD11_RS10630;product=YdfR family protein;protein_id=WP_000189915.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 6013 6228 . - . ID=gene-AD11_RS10635;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=AD11_RS10635;old_locus_tag=AD11_1547 NZ_JJLL01000120.1 Protein Homology CDS 6013 6228 . - 0 ID=cds-WP_000839590.1;Parent=gene-AD11_RS10635;Dbxref=GenBank:WP_000839590.1;Name=WP_000839590.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416074.4;locus_tag=AD11_RS10635;product=phage lysis protein EssD;protein_id=WP_000839590.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 6448 6618 . + . ID=gene-AD11_RS32525;Name=ynfU;gbkey=Gene;gene=ynfU;gene_biotype=protein_coding;locus_tag=AD11_RS32525 NZ_JJLL01000120.1 Protein Homology CDS 6448 6618 . + 0 ID=cds-WP_001405948.1;Parent=gene-AD11_RS32525;Dbxref=GenBank:WP_001405948.1;Name=WP_001405948.1;gbkey=CDS;gene=ynfU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051186.1;locus_tag=AD11_RS32525;product=putative zinc-binding protein YnfU;protein_id=WP_001405948.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 6982 7197 . - . ID=gene-AD11_RS10640;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=AD11_RS10640;old_locus_tag=AD11_1549 NZ_JJLL01000120.1 Protein Homology CDS 6982 7197 . - 0 ID=cds-WP_000066484.1;Parent=gene-AD11_RS10640;Dbxref=GenBank:WP_000066484.1;Name=WP_000066484.1;gbkey=CDS;gene=cspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416075.1;locus_tag=AD11_RS10640;product=cold shock-like protein CspB;protein_id=WP_000066484.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 7498 7710 . + . ID=gene-AD11_RS10645;Name=cspF;gbkey=Gene;gene=cspF;gene_biotype=protein_coding;locus_tag=AD11_RS10645;old_locus_tag=AD11_1550 NZ_JJLL01000120.1 Protein Homology CDS 7498 7710 . + 0 ID=cds-WP_000087756.1;Parent=gene-AD11_RS10645;Dbxref=GenBank:WP_000087756.1;Name=WP_000087756.1;gbkey=CDS;gene=cspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416076.1;locus_tag=AD11_RS10645;product=cold shock-like protein CspF;protein_id=WP_000087756.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 7765 7854 . + . ID=gene-AD11_RS31555;Name=AD11_RS31555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31555 NZ_JJLL01000120.1 Protein Homology CDS 7765 7854 . + 0 ID=cds-WP_120795389.1;Parent=gene-AD11_RS31555;Dbxref=GenBank:WP_120795389.1;Name=WP_120795389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518791.1;locus_tag=AD11_RS31555;product=hypothetical protein;protein_id=WP_120795389.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 8132 8884 . - . ID=gene-AD11_RS10650;Name=ydfT;gbkey=Gene;gene=ydfT;gene_biotype=protein_coding;locus_tag=AD11_RS10650;old_locus_tag=AD11_1551 NZ_JJLL01000120.1 Protein Homology CDS 8132 8884 . - 0 ID=cds-WP_001047135.1;Parent=gene-AD11_RS10650;Dbxref=GenBank:WP_001047135.1;Name=WP_001047135.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=ydfT;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416077.4;locus_tag=AD11_RS10650;product=antitermination protein;protein_id=WP_001047135.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 8898 9947 . - . ID=gene-AD11_RS10655;Name=ydfU;gbkey=Gene;gene=ydfU;gene_biotype=protein_coding;locus_tag=AD11_RS10655;old_locus_tag=AD11_1552 NZ_JJLL01000120.1 Protein Homology CDS 8898 9947 . - 0 ID=cds-WP_001265198.1;Parent=gene-AD11_RS10655;Dbxref=GenBank:WP_001265198.1;Name=WP_001265198.1;gbkey=CDS;gene=ydfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416078.4;locus_tag=AD11_RS10655;product=DUF968 domain-containing protein;protein_id=WP_001265198.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 9949 10227 . - . ID=gene-AD11_RS10660;Name=AD11_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10660 NZ_JJLL01000120.1 Protein Homology CDS 9949 10227 . - 0 ID=cds-WP_012304870.1;Parent=gene-AD11_RS10660;Dbxref=GenBank:WP_012304870.1;Name=WP_012304870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707878.1;locus_tag=AD11_RS10660;product=hypothetical protein;protein_id=WP_012304870.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 10294 10545 . - . ID=gene-AD11_RS10665;Name=rem;gbkey=Gene;gene=rem;gene_biotype=protein_coding;locus_tag=AD11_RS10665;old_locus_tag=AD11_1553 NZ_JJLL01000120.1 Protein Homology CDS 10294 10545 . - 0 ID=cds-WP_000980994.1;Parent=gene-AD11_RS10665;Dbxref=GenBank:WP_000980994.1;Name=WP_000980994.1;gbkey=CDS;gene=rem;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416079.1;locus_tag=AD11_RS10665;product=protein Rem;protein_id=WP_000980994.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 10762 10917 . - . ID=gene-AD11_RS10670;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AD11_RS10670 NZ_JJLL01000120.1 Protein Homology CDS 10762 10917 . - 0 ID=cds-WP_000813254.1;Parent=gene-AD11_RS10670;Dbxref=GenBank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AD11_RS10670;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 10989 11276 . - . ID=gene-AD11_RS10675;Name=relE;gbkey=Gene;gene=relE;gene_biotype=protein_coding;locus_tag=AD11_RS10675 NZ_JJLL01000120.1 Protein Homology CDS 10989 11276 . - 0 ID=cds-WP_000323025.1;Parent=gene-AD11_RS10675;Dbxref=GenBank:WP_000323025.1;Name=WP_000323025.1;gbkey=CDS;gene=relE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416081.1;locus_tag=AD11_RS10675;product=type II toxin-antitoxin system mRNA interferase RelE;protein_id=WP_000323025.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 11276 11515 . - . ID=gene-AD11_RS10680;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=AD11_RS10680;old_locus_tag=AD11_1555 NZ_JJLL01000120.1 Protein Homology CDS 11276 11515 . - 0 ID=cds-WP_000534858.1;Parent=gene-AD11_RS10680;Dbxref=GenBank:WP_000534858.1;Name=WP_000534858.1;gbkey=CDS;gene=relB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416082.1;locus_tag=AD11_RS10680;product=type II toxin-antitoxin system antitoxin RelB;protein_id=WP_000534858.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 11540 11845 . + . ID=gene-AD11_RS29055;Name=ydfV;gbkey=Gene;gene=ydfV;gene_biotype=protein_coding;locus_tag=AD11_RS29055 NZ_JJLL01000120.1 Protein Homology CDS 11540 11845 . + 0 ID=cds-WP_001326990.1;Parent=gene-AD11_RS29055;Dbxref=GenBank:WP_001326990.1;Name=WP_001326990.1;gbkey=CDS;gene=ydfV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416083.1;locus_tag=AD11_RS29055;product=protein YdfV;protein_id=WP_001326990.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 12048 12380 . + . ID=gene-AD11_RS10685;Name=flxA;gbkey=Gene;gene=flxA;gene_biotype=protein_coding;locus_tag=AD11_RS10685;old_locus_tag=AD11_1556 NZ_JJLL01000120.1 Protein Homology CDS 12048 12380 . + 0 ID=cds-WP_033866382.1;Parent=gene-AD11_RS10685;Dbxref=GenBank:WP_033866382.1;Name=WP_033866382.1;gbkey=CDS;gene=flxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416084.1;locus_tag=AD11_RS10685;product=FlxA-like family protein;protein_id=WP_033866382.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 12817 12966 . - . ID=gene-AD11_RS32530;Name=ydfW;gbkey=Gene;gene=ydfW;gene_biotype=protein_coding;locus_tag=AD11_RS32530 NZ_JJLL01000120.1 Protein Homology CDS 12817 12966 . - 0 ID=cds-WP_180302674.1;Parent=gene-AD11_RS32530;Dbxref=GenBank:WP_180302674.1;Name=WP_180302674.1;gbkey=CDS;gene=ydfW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518792.1;locus_tag=AD11_RS32530;product=protein YdfW;protein_id=WP_180302674.1;transl_table=11 NZ_JJLL01000120.1 RefSeq pseudogene 13087 14157 . - . ID=gene-AD11_RS10690;Name=AD11_RS10690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10690;old_locus_tag=AD11_1557;partial=true;pseudo=true;start_range=.,13087 NZ_JJLL01000120.1 Protein Homology CDS 13087 14157 . - 0 ID=cds-AD11_RS10690;Parent=gene-AD11_RS10690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF033594.2;locus_tag=AD11_RS10690;partial=true;product=IS1202-like element ISEsa1 family transposase;pseudo=true;start_range=.,13087;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 14191 14610 . - . ID=gene-AD11_RS10695;Name=AD11_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10695;old_locus_tag=AD11_1558 NZ_JJLL01000120.1 Protein Homology CDS 14191 14610 . - 0 ID=cds-WP_001151195.1;Parent=gene-AD11_RS10695;Dbxref=GenBank:WP_001151195.1;Name=WP_001151195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151196.1;locus_tag=AD11_RS10695;product=DUF977 family protein;protein_id=WP_001151195.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 14651 15616 . - . ID=gene-AD11_RS10700;Name=AD11_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10700;old_locus_tag=AD11_1559 NZ_JJLL01000120.1 Protein Homology CDS 14651 15616 . - 0 ID=cds-WP_032084229.1;Parent=gene-AD11_RS10700;Dbxref=GenBank:WP_032084229.1;Name=WP_032084229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373617.1;locus_tag=AD11_RS10700;product=phage O protein family;protein_id=WP_032084229.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 15597 16118 . - . ID=gene-AD11_RS10705;Name=AD11_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10705;old_locus_tag=AD11_1560 NZ_JJLL01000120.1 Protein Homology CDS 15597 16118 . - 0 ID=cds-WP_000705349.1;Parent=gene-AD11_RS10705;Dbxref=GenBank:WP_000705349.1;Name=WP_000705349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578395.1;locus_tag=AD11_RS10705;product=toxin YdaT family protein;protein_id=WP_000705349.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 16102 16329 . - . ID=gene-AD11_RS10710;Name=AD11_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10710;old_locus_tag=AD11_1561 NZ_JJLL01000120.1 Protein Homology CDS 16102 16329 . - 0 ID=cds-WP_000476993.1;Parent=gene-AD11_RS10710;Dbxref=GenBank:WP_000476993.1;Name=WP_000476993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476984.1;locus_tag=AD11_RS10710;product=Cro/CI family transcriptional regulator;protein_id=WP_000476993.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 16407 16814 . + . ID=gene-AD11_RS10715;Name=AD11_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10715 NZ_JJLL01000120.1 Protein Homology CDS 16407 16814 . + 0 ID=cds-WP_001003381.1;Parent=gene-AD11_RS10715;Dbxref=GenBank:WP_001003381.1;Name=WP_001003381.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001003380.1;locus_tag=AD11_RS10715;product=helix-turn-helix domain-containing protein;protein_id=WP_001003381.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 17007 17162 . + . ID=gene-AD11_RS10720;Name=ydfA;gbkey=Gene;gene=ydfA;gene_biotype=protein_coding;locus_tag=AD11_RS10720;old_locus_tag=AD11_1564 NZ_JJLL01000120.1 Protein Homology CDS 17007 17162 . + 0 ID=cds-WP_000379589.1;Parent=gene-AD11_RS10720;Dbxref=GenBank:WP_000379589.1;Name=WP_000379589.1;gbkey=CDS;gene=ydfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309092.1;locus_tag=AD11_RS10720;product=DUF1391 family protein;protein_id=WP_000379589.1;transl_table=11 NZ_JJLL01000120.1 RefSeq pseudogene 17164 17265 . + . ID=gene-AD11_RS32875;Name=ydfB;end_range=17265,.;gbkey=Gene;gene=ydfB;gene_biotype=pseudogene;locus_tag=AD11_RS32875;partial=true;pseudo=true NZ_JJLL01000120.1 Protein Homology CDS 17164 17265 . + 0 ID=cds-AD11_RS32875;Parent=gene-AD11_RS32875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17265,.;gbkey=CDS;gene=ydfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344964.1;locus_tag=AD11_RS32875;partial=true;product=protein YdfB;pseudo=true;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 18226 18414 . + . ID=gene-AD11_RS30680;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AD11_RS30680;old_locus_tag=AD11_1567 NZ_JJLL01000120.1 Protein Homology CDS 18226 18414 . + 0 ID=cds-WP_000854559.1;Parent=gene-AD11_RS30680;Dbxref=GenBank:WP_000854559.1;Name=WP_000854559.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416092.1;locus_tag=AD11_RS30680;product=cell division inhibition protein DicB;protein_id=WP_000854559.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 18411 18602 . + . ID=gene-AD11_RS10735;Name=ydfD;gbkey=Gene;gene=ydfD;gene_biotype=protein_coding;locus_tag=AD11_RS10735;old_locus_tag=AD11_1568 NZ_JJLL01000120.1 Protein Homology CDS 18411 18602 . + 0 ID=cds-WP_001083280.1;Parent=gene-AD11_RS10735;Dbxref=GenBank:WP_001083280.1;Name=WP_001083280.1;gbkey=CDS;gene=ydfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416093.1;locus_tag=AD11_RS10735;product=lysis protein YdfD;protein_id=WP_001083280.1;transl_table=11 NZ_JJLL01000120.1 RefSeq pseudogene 18696 21167 . + . ID=gene-AD11_RS10740;Name=AD11_RS10740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10740;pseudo=true NZ_JJLL01000120.1 Protein Homology CDS 18696 21167 . + 0 ID=cds-AD11_RS10740;Parent=gene-AD11_RS10740;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310313.1;locus_tag=AD11_RS10740;product=3'-5' exoribonuclease domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 21240 21491 . + . ID=gene-AD11_RS10745;Name=AD11_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10745;old_locus_tag=AD11_1571 NZ_JJLL01000120.1 Protein Homology CDS 21240 21491 . + 0 ID=cds-WP_000005552.1;Parent=gene-AD11_RS10745;Dbxref=GenBank:WP_000005552.1;Name=WP_000005552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005552.1;locus_tag=AD11_RS10745;product=excisionase family protein;protein_id=WP_000005552.1;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 21526 22806 . + . ID=gene-AD11_RS10750;Name=AD11_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10750;old_locus_tag=AD11_1572 NZ_JJLL01000120.1 Protein Homology CDS 21526 22806 . + 0 ID=cds-WP_021533434.1;Parent=gene-AD11_RS10750;Dbxref=GenBank:WP_021533434.1;Name=WP_021533434.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686441.1;locus_tag=AD11_RS10750;product=tyrosine-type recombinase/integrase;protein_id=WP_021533434.1;transl_table=11 NZ_JJLL01000120.1 RefSeq pseudogene 22994 23617 . - . ID=gene-AD11_RS10755;Name=AD11_RS10755;end_range=23617,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10755;old_locus_tag=AD11_1573;partial=true;pseudo=true NZ_JJLL01000120.1 Protein Homology CDS 22994 23617 . - 0 ID=cds-AD11_RS10755;Parent=gene-AD11_RS10755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008270,GO:0016491;end_range=23617,.;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AD11_RS10755;partial=true;product=Zn-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_JJLL01000120.1 RefSeq gene 23655 24095 . - . ID=gene-AD11_RS10760;Name=AD11_RS10760;end_range=24095,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10760;old_locus_tag=AD11_1574;partial=true NZ_JJLL01000120.1 Protein Homology CDS 23655 24095 . - 0 ID=cds-WP_148725000.1;Parent=gene-AD11_RS10760;Dbxref=GenBank:WP_148725000.1;Name=WP_148725000.1;end_range=24095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS10760;partial=true;product=IS66 family transposase;protein_id=WP_148725000.1;transl_table=11 ##sequence-region NZ_JJLL01000121.1 1 14938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000121.1 RefSeq region 1 14938 . + . ID=NZ_JJLL01000121.1:1..14938;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000121.1 RefSeq pseudogene 1 121 . - . ID=gene-AD11_RS32060;Name=AD11_RS32060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32060;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000121.1 Protein Homology CDS 1 121 . - 0 ID=cds-AD11_RS32060;Parent=gene-AD11_RS32060;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310766.2;locus_tag=AD11_RS32060;partial=true;product=lysis protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 123 209 . - . ID=gene-AD11_RS10765;Name=AD11_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10765 NZ_JJLL01000121.1 Protein Homology CDS 123 209 . - 0 ID=cds-WP_032140280.1-3;Parent=gene-AD11_RS10765;Dbxref=GenBank:WP_032140280.1;Name=WP_032140280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AD11_RS10765;product=hypothetical protein;protein_id=WP_032140280.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 221 376 . - . ID=gene-AD11_RS32535;Name=AD11_RS32535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32535;old_locus_tag=AD11_1576 NZ_JJLL01000121.1 Protein Homology CDS 221 376 . - 0 ID=cds-WP_042004856.1-2;Parent=gene-AD11_RS32535;Dbxref=GenBank:WP_042004856.1;Name=WP_042004856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000788411.1;locus_tag=AD11_RS32535;product=hypothetical protein;protein_id=WP_042004856.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 340 471 . - . ID=gene-AD11_RS32880;Name=AD11_RS32880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32880;old_locus_tag=AD11_1577 NZ_JJLL01000121.1 Protein Homology CDS 340 471 . - 0 ID=cds-WP_001280935.1-2;Parent=gene-AD11_RS32880;Dbxref=GenBank:WP_001280935.1;Name=WP_001280935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280968.1;locus_tag=AD11_RS32880;product=hypothetical protein;protein_id=WP_001280935.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 764 1297 . - . ID=gene-AD11_RS10785;Name=AD11_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10785;old_locus_tag=AD11_1578 NZ_JJLL01000121.1 Protein Homology CDS 764 1297 . - 0 ID=cds-WP_000992072.1;Parent=gene-AD11_RS10785;Dbxref=GenBank:WP_000992072.1;Name=WP_000992072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309123.1;locus_tag=AD11_RS10785;product=lysozyme;protein_id=WP_000992072.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 1403 1675 . + . ID=gene-AD11_RS10790;Name=AD11_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10790;old_locus_tag=AD11_1579 NZ_JJLL01000121.1 Protein Homology CDS 1403 1675 . + 0 ID=cds-WP_000369850.1;Parent=gene-AD11_RS10790;Dbxref=GenBank:WP_000369850.1;Name=WP_000369850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369850.1;locus_tag=AD11_RS10790;product=hypothetical protein;protein_id=WP_000369850.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 1641 1985 . - . ID=gene-AD11_RS10795;Name=AD11_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10795;old_locus_tag=AD11_1580 NZ_JJLL01000121.1 Protein Homology CDS 1641 1985 . - 0 ID=cds-WP_000193278.1;Parent=gene-AD11_RS10795;Dbxref=GenBank:WP_000193278.1;Name=WP_000193278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235607.1;locus_tag=AD11_RS10795;product=YdfR family protein;protein_id=WP_000193278.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 1990 2205 . - . ID=gene-AD11_RS10800;Name=AD11_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10800;old_locus_tag=AD11_1581 NZ_JJLL01000121.1 Protein Homology CDS 1990 2205 . - 0 ID=cds-WP_000284510.1-3;Parent=gene-AD11_RS10800;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AD11_RS10800;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 2356 4212 . - . ID=gene-AD11_RS10805;Name=AD11_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10805;old_locus_tag=AD11_1582 NZ_JJLL01000121.1 Protein Homology CDS 2356 4212 . - 0 ID=cds-WP_033865364.1;Parent=gene-AD11_RS10805;Dbxref=GenBank:WP_033865364.1;Name=WP_033865364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309808.1;locus_tag=AD11_RS10805;product=SASA family carbohydrate esterase;protein_id=WP_033865364.1;transl_table=11 NZ_JJLL01000121.1 RefSeq pseudogene 4968 5093 . + . ID=gene-AD11_RS32540;Name=AD11_RS32540;end_range=5093,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32540;partial=true;pseudo=true NZ_JJLL01000121.1 Protein Homology CDS 4968 5093 . + 0 ID=cds-AD11_RS32540;Parent=gene-AD11_RS32540;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5093,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009199.1;locus_tag=AD11_RS32540;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 5188 5264 . - . ID=gene-AD11_RS10810;Name=AD11_RS10810;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS10810;old_locus_tag=AD11_1583 NZ_JJLL01000121.1 tRNAscan-SE tRNA 5188 5264 . - . ID=rna-AD11_RS10810;Parent=gene-AD11_RS10810;anticodon=(pos:complement(5228..5230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS10810;product=tRNA-Arg NZ_JJLL01000121.1 tRNAscan-SE exon 5188 5264 . - . ID=exon-AD11_RS10810-1;Parent=rna-AD11_RS10810;anticodon=(pos:complement(5228..5230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS10810;product=tRNA-Arg NZ_JJLL01000121.1 RefSeq gene 5278 5354 . - . ID=gene-AD11_RS10815;Name=AD11_RS10815;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS10815 NZ_JJLL01000121.1 tRNAscan-SE tRNA 5278 5354 . - . ID=rna-AD11_RS10815;Parent=gene-AD11_RS10815;anticodon=(pos:complement(5318..5320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS10815;product=tRNA-Arg NZ_JJLL01000121.1 tRNAscan-SE exon 5278 5354 . - . ID=exon-AD11_RS10815-1;Parent=rna-AD11_RS10815;anticodon=(pos:complement(5318..5320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS10815;product=tRNA-Arg NZ_JJLL01000121.1 RefSeq gene 5362 5437 . - . ID=gene-AD11_RS10820;Name=AD11_RS10820;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS10820;old_locus_tag=AD11_1584 NZ_JJLL01000121.1 tRNAscan-SE tRNA 5362 5437 . - . ID=rna-AD11_RS10820;Parent=gene-AD11_RS10820;anticodon=(pos:complement(5402..5404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS10820;product=tRNA-Ile NZ_JJLL01000121.1 tRNAscan-SE exon 5362 5437 . - . ID=exon-AD11_RS10820-1;Parent=rna-AD11_RS10820;anticodon=(pos:complement(5402..5404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS10820;product=tRNA-Ile NZ_JJLL01000121.1 RefSeq gene 5487 6536 . - . ID=gene-AD11_RS10825;Name=AD11_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10825;old_locus_tag=AD11_1585 NZ_JJLL01000121.1 Protein Homology CDS 5487 6536 . - 0 ID=cds-WP_000935515.1;Parent=gene-AD11_RS10825;Dbxref=GenBank:WP_000935515.1;Name=WP_000935515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575625.1;locus_tag=AD11_RS10825;product=DNA-methyltransferase;protein_id=WP_000935515.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 6687 6884 . - . ID=gene-AD11_RS10830;Name=AD11_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10830;old_locus_tag=AD11_1586 NZ_JJLL01000121.1 Protein Homology CDS 6687 6884 . - 0 ID=cds-WP_000917767.1;Parent=gene-AD11_RS10830;Dbxref=GenBank:WP_000917767.1;Name=WP_000917767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AD11_RS10830;product=hypothetical protein;protein_id=WP_000917767.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 7111 7932 . - . ID=gene-AD11_RS10835;Name=AD11_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10835;old_locus_tag=AD11_1587 NZ_JJLL01000121.1 Protein Homology CDS 7111 7932 . - 0 ID=cds-WP_000762881.1;Parent=gene-AD11_RS10835;Dbxref=GenBank:WP_000762881.1;Name=WP_000762881.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707426.1;locus_tag=AD11_RS10835;product=antitermination protein;protein_id=WP_000762881.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 7929 8309 . - . ID=gene-AD11_RS10840;Name=AD11_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10840;old_locus_tag=AD11_1588 NZ_JJLL01000121.1 Protein Homology CDS 7929 8309 . - 0 ID=cds-WP_000140014.1;Parent=gene-AD11_RS10840;Dbxref=GenBank:WP_000140014.1;Name=WP_000140014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140009.1;locus_tag=AD11_RS10840;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000140014.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 8310 9368 . - . ID=gene-AD11_RS10845;Name=AD11_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10845;old_locus_tag=AD11_1589 NZ_JJLL01000121.1 Protein Homology CDS 8310 9368 . - 0 ID=cds-WP_001580491.1;Parent=gene-AD11_RS10845;Dbxref=GenBank:WP_001580491.1;Name=WP_001580491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265086.1;locus_tag=AD11_RS10845;product=DUF968 domain-containing protein;protein_id=WP_001580491.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 9370 9648 . - . ID=gene-AD11_RS10850;Name=AD11_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10850 NZ_JJLL01000121.1 Protein Homology CDS 9370 9648 . - 0 ID=cds-WP_032183375.1;Parent=gene-AD11_RS10850;Dbxref=GenBank:WP_032183375.1;Name=WP_032183375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707878.1;locus_tag=AD11_RS10850;product=hypothetical protein;protein_id=WP_032183375.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 10057 12321 . - . ID=gene-AD11_RS10855;Name=iteS;gbkey=Gene;gene=iteS;gene_biotype=protein_coding;locus_tag=AD11_RS10855;old_locus_tag=AD11_1592 NZ_JJLL01000121.1 Protein Homology CDS 10057 12321 . - 0 ID=cds-WP_032183377.1;Parent=gene-AD11_RS10855;Dbxref=GenBank:WP_032183377.1;Name=WP_032183377.1;Ontology_term=GO:0006508,GO:0051607,GO:0008236;gbkey=CDS;gene=iteS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551050.1;locus_tag=AD11_RS10855;product=S8 family anti-phage peptidase IteS;protein_id=WP_032183377.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 12296 13450 . - . ID=gene-AD11_RS10860;Name=iteA;gbkey=Gene;gene=iteA;gene_biotype=protein_coding;locus_tag=AD11_RS10860;old_locus_tag=AD11_1593 NZ_JJLL01000121.1 Protein Homology CDS 12296 13450 . - 0 ID=cds-WP_000385105.1;Parent=gene-AD11_RS10860;Dbxref=GenBank:WP_000385105.1;Name=WP_000385105.1;Ontology_term=GO:0051607,GO:0005524,GO:0016887;gbkey=CDS;gene=iteA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000385105.1;locus_tag=AD11_RS10860;product=anti-phage ATPase IteA;protein_id=WP_000385105.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 13644 14075 . - . ID=gene-AD11_RS10865;Name=AD11_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10865;old_locus_tag=AD11_1594 NZ_JJLL01000121.1 Protein Homology CDS 13644 14075 . - 0 ID=cds-WP_001403739.1;Parent=gene-AD11_RS10865;Dbxref=GenBank:WP_001403739.1;Name=WP_001403739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001141107.1;locus_tag=AD11_RS10865;product=DUF977 family protein;protein_id=WP_001403739.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 14091 14852 . - . ID=gene-AD11_RS10870;Name=AD11_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10870;old_locus_tag=AD11_1595 NZ_JJLL01000121.1 Protein Homology CDS 14091 14852 . - 0 ID=cds-WP_032183380.1;Parent=gene-AD11_RS10870;Dbxref=GenBank:WP_032183380.1;Name=WP_032183380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309973.2;locus_tag=AD11_RS10870;product=DUF1627 domain-containing protein;protein_id=WP_032183380.1;transl_table=11 NZ_JJLL01000121.1 RefSeq gene 14875 14938 . - . ID=gene-AD11_RS32545;Name=AD11_RS32545;end_range=14938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32545;partial=true NZ_JJLL01000121.1 Protein Homology CDS 14875 14938 . - 1 ID=cds-WP_244580362.1;Parent=gene-AD11_RS32545;Dbxref=GenBank:WP_244580362.1;Name=WP_244580362.1;end_range=14938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415878.1;locus_tag=AD11_RS32545;partial=true;product=hypothetical protein;protein_id=WP_244580362.1;transl_table=11 ##sequence-region NZ_JJLL01000122.1 1 11921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000122.1 RefSeq region 1 11921 . + . ID=NZ_JJLL01000122.1:1..11921;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000122.1 RefSeq gene 1 70 . - . ID=gene-AD11_RS33175;Name=AD11_RS33175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33175;partial=true;start_range=.,1 NZ_JJLL01000122.1 Protein Homology CDS 1 70 . - 0 ID=cds-WP_373701317.1;Parent=gene-AD11_RS33175;Dbxref=GenBank:WP_373701317.1;Name=WP_373701317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AD11_RS33175;partial=true;product=hypothetical protein;protein_id=WP_373701317.1;start_range=.,1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 120 467 . - . ID=gene-AD11_RS10875;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS10875;old_locus_tag=AD11_1596 NZ_JJLL01000122.1 Protein Homology CDS 120 467 . - 0 ID=cds-WP_000612591.1-2;Parent=gene-AD11_RS10875;Dbxref=GenBank:WP_000612591.1;Name=WP_000612591.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD11_RS10875;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612591.1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 464 844 . - . ID=gene-AD11_RS32065;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS32065 NZ_JJLL01000122.1 Protein Homology CDS 464 844 . - 0 ID=cds-WP_001466366.1;Parent=gene-AD11_RS32065;Dbxref=GenBank:WP_001466366.1;Name=WP_001466366.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AD11_RS32065;product=IS66-like element accessory protein TnpA;protein_id=WP_001466366.1;transl_table=11 NZ_JJLL01000122.1 RefSeq pseudogene 936 1340 . - . ID=gene-AD11_RS10885;Name=AD11_RS10885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10885;old_locus_tag=AD11_1597;partial=true;pseudo=true;start_range=.,936 NZ_JJLL01000122.1 Protein Homology CDS 936 1340 . - 0 ID=cds-AD11_RS10885;Parent=gene-AD11_RS10885;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AD11_RS10885;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;start_range=.,936;transl_table=11 NZ_JJLL01000122.1 RefSeq pseudogene 1352 2565 . - . ID=gene-AD11_RS10890;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=pseudogene;locus_tag=AD11_RS10890;old_locus_tag=AD11_1599;pseudo=true NZ_JJLL01000122.1 Protein Homology CDS 1352 2565 . - 0 ID=cds-AD11_RS10890;Parent=gene-AD11_RS10890;Note=frameshifted;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AD11_RS10890;product=starvation-sensing protein RspA;pseudo=true;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 2771 3097 . - . ID=gene-AD11_RS10895;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AD11_RS10895;old_locus_tag=AD11_1600 NZ_JJLL01000122.1 Protein Homology CDS 2771 3097 . - 0 ID=cds-WP_000598292.1;Parent=gene-AD11_RS10895;Dbxref=GenBank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AD11_RS10895;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 3232 3573 . + . ID=gene-AD11_RS10900;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AD11_RS10900;old_locus_tag=AD11_1601 NZ_JJLL01000122.1 Protein Homology CDS 3232 3573 . + 0 ID=cds-WP_000705197.1;Parent=gene-AD11_RS10900;Dbxref=GenBank:WP_000705197.1;Name=WP_000705197.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707472.1;locus_tag=AD11_RS10900;product=DUF1283 family protein;protein_id=WP_000705197.1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 3608 4168 . + . ID=gene-AD11_RS10905;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AD11_RS10905;old_locus_tag=AD11_1602 NZ_JJLL01000122.1 Protein Homology CDS 3608 4168 . + 0 ID=cds-WP_001138581.1;Parent=gene-AD11_RS10905;Dbxref=GenBank:WP_001138581.1;Name=WP_001138581.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AD11_RS10905;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 4171 4881 . - . ID=gene-AD11_RS10910;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AD11_RS10910;old_locus_tag=AD11_1603 NZ_JJLL01000122.1 Protein Homology CDS 4171 4881 . - 0 ID=cds-WP_072104773.1;Parent=gene-AD11_RS10910;Dbxref=GenBank:WP_072104773.1;Name=WP_072104773.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AD11_RS10910;product=YnfC family lipoprotein;protein_id=WP_072104773.1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 4989 5294 . + . ID=gene-AD11_RS10915;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AD11_RS10915;old_locus_tag=AD11_1604 NZ_JJLL01000122.1 Protein Homology CDS 4989 5294 . + 0 ID=cds-WP_001295396.1;Parent=gene-AD11_RS10915;Dbxref=GenBank:WP_001295396.1;Name=WP_001295396.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707474.2;locus_tag=AD11_RS10915;product=DUF1161 domain-containing protein;protein_id=WP_001295396.1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 5493 7919 . + . ID=gene-AD11_RS10920;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=AD11_RS10920;old_locus_tag=AD11_1605 NZ_JJLL01000122.1 Protein Homology CDS 5493 7919 . + 0 ID=cds-WP_001619485.1;Parent=gene-AD11_RS10920;Dbxref=GenBank:WP_001619485.1;Name=WP_001619485.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AD11_RS10920;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_001619485.1;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 7980 10403 . + . ID=gene-AD11_RS10925;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AD11_RS10925;old_locus_tag=AD11_1606 NZ_JJLL01000122.1 Protein Homology CDS 7980 10403 . + 0 ID=cds-WP_001340362.1;Parent=gene-AD11_RS10925;Dbxref=GenBank:WP_001340362.1;Name=WP_001340362.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AD11_RS10925;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_001340362.1;transl_table=11 NZ_JJLL01000122.1 RefSeq pseudogene 10414 10497 . + . ID=gene-AD11_RS10930;Name=AD11_RS10930;end_range=10497,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10930;old_locus_tag=AD11_1607;partial=true;pseudo=true NZ_JJLL01000122.1 Protein Homology CDS 10414 10497 . + 0 ID=cds-AD11_RS10930;Parent=gene-AD11_RS10930;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10497,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AD11_RS10930;partial=true;product=4Fe-4S binding protein;pseudo=true;transl_table=11 NZ_JJLL01000122.1 RefSeq pseudogene 10943 11209 . + . ID=gene-AD11_RS10940;Name=AD11_RS10940;end_range=11209,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS10940;old_locus_tag=AD11_1608;partial=true;pseudo=true NZ_JJLL01000122.1 Protein Homology CDS 10943 11209 . + 0 ID=cds-AD11_RS10940;Parent=gene-AD11_RS10940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309278.1;locus_tag=AD11_RS10940;partial=true;product=antA/AntB antirepressor family protein;pseudo=true;transl_table=11 NZ_JJLL01000122.1 RefSeq gene 11477 11921 . + . ID=gene-AD11_RS10945;Name=AD11_RS10945;end_range=11921,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10945;old_locus_tag=AD11_1609;partial=true NZ_JJLL01000122.1 Protein Homology CDS 11477 11921 . + 0 ID=cds-WP_033866388.1;Parent=gene-AD11_RS10945;Dbxref=GenBank:WP_033866388.1;Name=WP_033866388.1;end_range=11921,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309278.1;locus_tag=AD11_RS10945;partial=true;product=antA/AntB antirepressor family protein;protein_id=WP_033866388.1;transl_table=11 ##sequence-region NZ_JJLL01000123.1 1 78979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000123.1 RefSeq region 1 78979 . + . ID=NZ_JJLL01000123.1:1..78979;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000123.1 RefSeq gene 1 639 . + . ID=gene-AD11_RS29090;Name=AD11_RS29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS29090;partial=true;start_range=.,1 NZ_JJLL01000123.1 Protein Homology CDS 1 639 . + 0 ID=cds-WP_032181409.1;Parent=gene-AD11_RS29090;Dbxref=GenBank:WP_032181409.1;Name=WP_032181409.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=AD11_RS29090;partial=true;product=site-specific integrase;protein_id=WP_032181409.1;start_range=.,1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 680 1231 . + . ID=gene-AD11_RS10955;Name=AD11_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS10955;old_locus_tag=AD11_1610 NZ_JJLL01000123.1 Protein Homology CDS 680 1231 . + 0 ID=cds-WP_000069315.1;Parent=gene-AD11_RS10955;Dbxref=GenBank:WP_000069315.1;Name=WP_000069315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02951.1;locus_tag=AD11_RS10955;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_000069315.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 1233 2087 . + . ID=gene-AD11_RS10960;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AD11_RS10960;old_locus_tag=AD11_1611 NZ_JJLL01000123.1 Protein Homology CDS 1233 2087 . + 0 ID=cds-WP_000526503.1;Parent=gene-AD11_RS10960;Dbxref=GenBank:WP_000526503.1;Name=WP_000526503.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AD11_RS10960;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_000526503.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 2130 2744 . + . ID=gene-AD11_RS10965;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AD11_RS10965;old_locus_tag=AD11_1612 NZ_JJLL01000123.1 Protein Homology CDS 2130 2744 . + 0 ID=cds-WP_000148710.1;Parent=gene-AD11_RS10965;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AD11_RS10965;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 2903 4195 . + . ID=gene-AD11_RS10970;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AD11_RS10970;old_locus_tag=AD11_1613 NZ_JJLL01000123.1 Protein Homology CDS 2903 4195 . + 0 ID=cds-WP_001315626.1;Parent=gene-AD11_RS10970;Dbxref=GenBank:WP_001315626.1;Name=WP_001315626.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AD11_RS10970;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_001315626.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 4148 4843 . - . ID=gene-AD11_RS10975;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AD11_RS10975;old_locus_tag=AD11_1614 NZ_JJLL01000123.1 Protein Homology CDS 4148 4843 . - 0 ID=cds-WP_000919231.1;Parent=gene-AD11_RS10975;Dbxref=GenBank:WP_000919231.1;Name=WP_000919231.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AD11_RS10975;product=dethiobiotin synthase;protein_id=WP_000919231.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 4968 6188 . - . ID=gene-AD11_RS10980;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AD11_RS10980;old_locus_tag=AD11_1615 NZ_JJLL01000123.1 Protein Homology CDS 4968 6188 . - 0 ID=cds-WP_000225262.1;Parent=gene-AD11_RS10980;Dbxref=GenBank:WP_000225262.1;Name=WP_000225262.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416111.1;locus_tag=AD11_RS10980;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225262.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 6323 7216 . - . ID=gene-AD11_RS10985;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AD11_RS10985;old_locus_tag=AD11_1616 NZ_JJLL01000123.1 Protein Homology CDS 6323 7216 . - 0 ID=cds-WP_001019530.1;Parent=gene-AD11_RS10985;Dbxref=GenBank:WP_001019530.1;Name=WP_001019530.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310328.1;locus_tag=AD11_RS10985;product=LysR family transcriptional regulator;protein_id=WP_001019530.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 7323 8576 . + . ID=gene-AD11_RS10990;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AD11_RS10990;old_locus_tag=AD11_1617 NZ_JJLL01000123.1 Protein Homology CDS 7323 8576 . + 0 ID=cds-WP_000091828.1;Parent=gene-AD11_RS10990;Dbxref=GenBank:WP_000091828.1;Name=WP_000091828.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310329.1;locus_tag=AD11_RS10990;product=MFS transporter;protein_id=WP_000091828.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 8626 8745 . - . ID=gene-AD11_RS33180;Name=AD11_RS33180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33180 NZ_JJLL01000123.1 Protein Homology CDS 8626 8745 . - 0 ID=cds-WP_001299090.1;Parent=gene-AD11_RS33180;Dbxref=GenBank:WP_001299090.1;Name=WP_001299090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=AD11_RS33180;product=KPN_01571 family protein;protein_id=WP_001299090.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 9001 9309 . + . ID=gene-AD11_RS10995;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AD11_RS10995;old_locus_tag=AD11_1618 NZ_JJLL01000123.1 Protein Homology CDS 9001 9309 . + 0 ID=cds-WP_001556621.1;Parent=gene-AD11_RS10995;Dbxref=GenBank:WP_001556621.1;Name=WP_001556621.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=AD11_RS10995;product=acid resistance repetitive basic protein Asr;protein_id=WP_001556621.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 9402 9485 . + . ID=gene-AD11_RS11000;Name=AD11_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS11000 NZ_JJLL01000123.1 Protein Homology CDS 9402 9485 . + 0 ID=cds-WP_000233090.1;Parent=gene-AD11_RS11000;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AD11_RS11000;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 9585 10406 . + . ID=gene-AD11_RS11005;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AD11_RS11005;old_locus_tag=AD11_1619 NZ_JJLL01000123.1 Protein Homology CDS 9585 10406 . + 0 ID=cds-WP_001260835.1;Parent=gene-AD11_RS11005;Dbxref=GenBank:WP_001260835.1;Name=WP_001260835.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310331.2;locus_tag=AD11_RS11005;product=trypsin-like serine peptidase;protein_id=WP_001260835.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 10445 10774 . - . ID=gene-AD11_RS11010;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AD11_RS11010;old_locus_tag=AD11_1620 NZ_JJLL01000123.1 Protein Homology CDS 10445 10774 . - 0 ID=cds-WP_000046661.1;Parent=gene-AD11_RS11010;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AD11_RS11010;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 10761 11126 . - . ID=gene-AD11_RS11015;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AD11_RS11015;old_locus_tag=AD11_1621 NZ_JJLL01000123.1 Protein Homology CDS 10761 11126 . - 0 ID=cds-WP_000276149.1;Parent=gene-AD11_RS11015;Dbxref=GenBank:WP_000276149.1;Name=WP_000276149.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AD11_RS11015;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 11233 11403 . - . ID=gene-AD11_RS33185;Name=AD11_RS33185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33185 NZ_JJLL01000123.1 Protein Homology CDS 11233 11403 . - 0 ID=cds-WP_001303517.1;Parent=gene-AD11_RS33185;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AD11_RS33185;product=hypothetical protein;protein_id=WP_001303517.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 11538 12572 . + . ID=gene-AD11_RS11020;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AD11_RS11020;old_locus_tag=AD11_1622 NZ_JJLL01000123.1 Protein Homology CDS 11538 12572 . + 0 ID=cds-WP_001118241.1;Parent=gene-AD11_RS11020;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AD11_RS11020;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 12597 13985 . - . ID=gene-AD11_RS11025;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AD11_RS11025;old_locus_tag=AD11_1623 NZ_JJLL01000123.1 Protein Homology CDS 12597 13985 . - 0 ID=cds-WP_033865467.1;Parent=gene-AD11_RS11025;Dbxref=GenBank:WP_033865467.1;Name=WP_033865467.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AD11_RS11025;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_033865467.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 13996 15528 . - . ID=gene-AD11_RS11030;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AD11_RS11030;old_locus_tag=AD11_1624 NZ_JJLL01000123.1 Protein Homology CDS 13996 15528 . - 0 ID=cds-WP_001300486.1;Parent=gene-AD11_RS11030;Dbxref=GenBank:WP_001300486.1;Name=WP_001300486.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AD11_RS11030;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001300486.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 16052 16996 . + . ID=gene-AD11_RS11035;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AD11_RS11035;old_locus_tag=AD11_1625 NZ_JJLL01000123.1 Protein Homology CDS 16052 16996 . + 0 ID=cds-WP_000769337.1;Parent=gene-AD11_RS11035;Dbxref=GenBank:WP_000769337.1;Name=WP_000769337.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AD11_RS11035;product=DUF1471 family protein YdgH;protein_id=WP_000769337.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 17182 18564 . + . ID=gene-AD11_RS11040;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AD11_RS11040;old_locus_tag=AD11_1626 NZ_JJLL01000123.1 Protein Homology CDS 17182 18564 . + 0 ID=cds-WP_000412379.1;Parent=gene-AD11_RS11040;Dbxref=GenBank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AD11_RS11040;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 18601 19323 . + . ID=gene-AD11_RS11045;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AD11_RS11045;old_locus_tag=AD11_1627 NZ_JJLL01000123.1 Protein Homology CDS 18601 19323 . + 0 ID=cds-WP_033865469.1;Parent=gene-AD11_RS11045;Dbxref=GenBank:WP_033865469.1;Name=WP_033865469.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AD11_RS11045;product=dihydromonapterin reductase;protein_id=WP_033865469.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 19320 19655 . - . ID=gene-AD11_RS11050;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AD11_RS11050;old_locus_tag=AD11_1628 NZ_JJLL01000123.1 Protein Homology CDS 19320 19655 . - 0 ID=cds-WP_000524868.1;Parent=gene-AD11_RS11050;Dbxref=GenBank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AD11_RS11050;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 19784 20503 . + . ID=gene-AD11_RS11055;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AD11_RS11055;old_locus_tag=AD11_1629 NZ_JJLL01000123.1 Protein Homology CDS 19784 20503 . + 0 ID=cds-WP_033865471.1;Parent=gene-AD11_RS11055;Dbxref=GenBank:WP_033865471.1;Name=WP_033865471.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AD11_RS11055;product=two-component system response regulator RstA;protein_id=WP_033865471.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 20507 21808 . + . ID=gene-AD11_RS11060;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AD11_RS11060;old_locus_tag=AD11_1630 NZ_JJLL01000123.1 Protein Homology CDS 20507 21808 . + 0 ID=cds-WP_000732510.1;Parent=gene-AD11_RS11060;Dbxref=GenBank:WP_000732510.1;Name=WP_000732510.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416126.1;locus_tag=AD11_RS11060;product=two-component system sensor histidine kinase RstB;protein_id=WP_000732510.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 21884 22813 . + . ID=gene-AD11_RS11065;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AD11_RS11065;old_locus_tag=AD11_1631 NZ_JJLL01000123.1 Protein Homology CDS 21884 22813 . + 0 ID=cds-WP_001295399.1;Parent=gene-AD11_RS11065;Dbxref=GenBank:WP_001295399.1;Name=WP_001295399.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310343.1;locus_tag=AD11_RS11065;product=DNA replication terminus site-binding protein;protein_id=WP_001295399.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 22810 24213 . - . ID=gene-AD11_RS11070;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AD11_RS11070;old_locus_tag=AD11_1632 NZ_JJLL01000123.1 Protein Homology CDS 22810 24213 . - 0 ID=cds-WP_001099115.1;Parent=gene-AD11_RS11070;Dbxref=GenBank:WP_001099115.1;Name=WP_001099115.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310344.1;locus_tag=AD11_RS11070;product=class II fumarate hydratase;protein_id=WP_001099115.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 24356 26002 . - . ID=gene-AD11_RS11075;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AD11_RS11075;old_locus_tag=AD11_1633 NZ_JJLL01000123.1 Protein Homology CDS 24356 26002 . - 0 ID=cds-WP_000066639.1;Parent=gene-AD11_RS11075;Dbxref=GenBank:WP_000066639.1;Name=WP_000066639.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AD11_RS11075;product=class I fumarate hydratase;protein_id=WP_000066639.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 26201 27376 . + . ID=gene-AD11_RS11080;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AD11_RS11080;old_locus_tag=AD11_1634 NZ_JJLL01000123.1 Protein Homology CDS 26201 27376 . + 0 ID=cds-WP_021559235.1;Parent=gene-AD11_RS11080;Dbxref=GenBank:WP_021559235.1;Name=WP_021559235.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AD11_RS11080;product=mannose-6-phosphate isomerase;protein_id=WP_021559235.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 27477 28985 . + . ID=gene-AD11_RS11085;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AD11_RS11085;old_locus_tag=AD11_1635 NZ_JJLL01000123.1 Protein Homology CDS 27477 28985 . + 0 ID=cds-WP_001043339.1;Parent=gene-AD11_RS11085;Dbxref=GenBank:WP_001043339.1;Name=WP_001043339.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416131.1;locus_tag=AD11_RS11085;product=YdgA family protein;protein_id=WP_001043339.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 29211 30476 . - . ID=gene-AD11_RS11090;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=AD11_RS11090;old_locus_tag=AD11_1636 NZ_JJLL01000123.1 Protein Homology CDS 29211 30476 . - 0 ID=cds-WP_001227037.1;Parent=gene-AD11_RS11090;Dbxref=GenBank:WP_001227037.1;Name=WP_001227037.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AD11_RS11090;product=glucuronide uptake porin UidC;protein_id=WP_001227037.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 30515 31888 . - . ID=gene-AD11_RS11095;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AD11_RS11095;old_locus_tag=AD11_1637 NZ_JJLL01000123.1 Protein Homology CDS 30515 31888 . - 0 ID=cds-WP_001075863.1;Parent=gene-AD11_RS11095;Dbxref=GenBank:WP_001075863.1;Name=WP_001075863.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=AD11_RS11095;product=glucuronide transporter;protein_id=WP_001075863.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 31885 33696 . - . ID=gene-AD11_RS11100;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=AD11_RS11100;old_locus_tag=AD11_1638 NZ_JJLL01000123.1 Protein Homology CDS 31885 33696 . - 0 ID=cds-WP_000945878.1;Parent=gene-AD11_RS11100;Dbxref=GenBank:WP_000945878.1;Name=WP_000945878.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AD11_RS11100;product=beta-glucuronidase;protein_id=WP_000945878.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 34087 34677 . - . ID=gene-AD11_RS11105;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AD11_RS11105;old_locus_tag=AD11_1639 NZ_JJLL01000123.1 Protein Homology CDS 34087 34677 . - 0 ID=cds-WP_000969092.1;Parent=gene-AD11_RS11105;Dbxref=GenBank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AD11_RS11105;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 34898 35665 . - . ID=gene-AD11_RS11110;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AD11_RS11110;old_locus_tag=AD11_1640 NZ_JJLL01000123.1 Protein Homology CDS 34898 35665 . - 0 ID=cds-WP_000483353.1;Parent=gene-AD11_RS11110;Dbxref=GenBank:WP_000483353.1;Name=WP_000483353.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AD11_RS11110;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 35776 36804 . - . ID=gene-AD11_RS11115;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AD11_RS11115;old_locus_tag=AD11_1641 NZ_JJLL01000123.1 Protein Homology CDS 35776 36804 . - 0 ID=cds-WP_000179519.1;Parent=gene-AD11_RS11115;Dbxref=GenBank:WP_000179519.1;Name=WP_000179519.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=AD11_RS11115;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179519.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 36979 38571 . + . ID=gene-AD11_RS11120;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AD11_RS11120;old_locus_tag=AD11_1642 NZ_JJLL01000123.1 Protein Homology CDS 36979 38571 . + 0 ID=cds-WP_000125636.1;Parent=gene-AD11_RS11120;Dbxref=GenBank:WP_000125636.1;Name=WP_000125636.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310356.1;locus_tag=AD11_RS11120;product=PTS maltose transporter subunit IICB;protein_id=WP_000125636.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 38581 39753 . + . ID=gene-AD11_RS11125;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AD11_RS11125;old_locus_tag=AD11_1643 NZ_JJLL01000123.1 Protein Homology CDS 38581 39753 . + 0 ID=cds-WP_000459371.1;Parent=gene-AD11_RS11125;Dbxref=GenBank:WP_000459371.1;Name=WP_000459371.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=AD11_RS11125;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_000459371.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 39857 40858 . + . ID=gene-AD11_RS11130;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AD11_RS11130;old_locus_tag=AD11_1644 NZ_JJLL01000123.1 Protein Homology CDS 39857 40858 . + 0 ID=cds-WP_000567490.1;Parent=gene-AD11_RS11130;Dbxref=GenBank:WP_000567490.1;Name=WP_000567490.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AD11_RS11130;product=adenosine deaminase;protein_id=WP_000567490.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 40892 41932 . - . ID=gene-AD11_RS11135;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=AD11_RS11135;old_locus_tag=AD11_1645 NZ_JJLL01000123.1 Protein Homology CDS 40892 41932 . - 0 ID=cds-WP_033865473.1;Parent=gene-AD11_RS11135;Dbxref=GenBank:WP_033865473.1;Name=WP_033865473.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AD11_RS11135;product=oxidoreductase;protein_id=WP_033865473.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 42175 42300 . + . ID=gene-AD11_RS11140;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AD11_RS11140 NZ_JJLL01000123.1 Protein Homology CDS 42175 42300 . + 0 ID=cds-WP_001300888.1;Parent=gene-AD11_RS11140;Dbxref=GenBank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AD11_RS11140;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 42573 42788 . + . ID=gene-AD11_RS11145;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AD11_RS11145;old_locus_tag=AD11_1646 NZ_JJLL01000123.1 Protein Homology CDS 42573 42788 . + 0 ID=cds-WP_000217950.1;Parent=gene-AD11_RS11145;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AD11_RS11145;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 42874 43314 . + . ID=gene-AD11_RS11150;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=AD11_RS11150;old_locus_tag=AD11_1647 NZ_JJLL01000123.1 Protein Homology CDS 42874 43314 . + 0 ID=cds-WP_000214176.1;Parent=gene-AD11_RS11150;Dbxref=GenBank:WP_000214176.1;Name=WP_000214176.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707526.2;locus_tag=AD11_RS11150;product=DUF2569 domain-containing protein;protein_id=WP_000214176.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 43391 43972 . + . ID=gene-AD11_RS11155;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AD11_RS11155;old_locus_tag=AD11_1648 NZ_JJLL01000123.1 Protein Homology CDS 43391 43972 . + 0 ID=cds-WP_000133193.1;Parent=gene-AD11_RS11155;Dbxref=GenBank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AD11_RS11155;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 43972 44550 . + . ID=gene-AD11_RS11160;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AD11_RS11160;old_locus_tag=AD11_1649 NZ_JJLL01000123.1 Protein Homology CDS 43972 44550 . + 0 ID=cds-WP_000991805.1;Parent=gene-AD11_RS11160;Dbxref=GenBank:WP_000991805.1;Name=WP_000991805.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416145.1;locus_tag=AD11_RS11160;product=electron transport complex subunit RsxB;protein_id=WP_000991805.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 44543 46957 . + . ID=gene-AD11_RS11165;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AD11_RS11165;old_locus_tag=AD11_1650 NZ_JJLL01000123.1 Protein Homology CDS 44543 46957 . + 0 ID=cds-WP_032174036.1;Parent=gene-AD11_RS11165;Dbxref=GenBank:WP_032174036.1;Name=WP_032174036.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915809.1;locus_tag=AD11_RS11165;product=electron transport complex subunit RsxC;protein_id=WP_032174036.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 46958 48016 . + . ID=gene-AD11_RS11170;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AD11_RS11170;old_locus_tag=AD11_1651 NZ_JJLL01000123.1 Protein Homology CDS 46958 48016 . + 0 ID=cds-WP_000231922.1;Parent=gene-AD11_RS11170;Dbxref=GenBank:WP_000231922.1;Name=WP_000231922.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310366.1;locus_tag=AD11_RS11170;product=electron transport complex subunit RsxD;protein_id=WP_000231922.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 48020 48640 . + . ID=gene-AD11_RS11175;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AD11_RS11175;old_locus_tag=AD11_1652 NZ_JJLL01000123.1 Protein Homology CDS 48020 48640 . + 0 ID=cds-WP_000920802.1;Parent=gene-AD11_RS11175;Dbxref=GenBank:WP_000920802.1;Name=WP_000920802.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AD11_RS11175;product=electron transport complex subunit RsxG;protein_id=WP_000920802.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 48644 49339 . + . ID=gene-AD11_RS11180;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AD11_RS11180;old_locus_tag=AD11_1653 NZ_JJLL01000123.1 Protein Homology CDS 48644 49339 . + 0 ID=cds-WP_001289652.1;Parent=gene-AD11_RS11180;Dbxref=GenBank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AD11_RS11180;product=electron transport complex subunit RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 49339 49974 . + . ID=gene-AD11_RS11185;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AD11_RS11185;old_locus_tag=AD11_1654 NZ_JJLL01000123.1 Protein Homology CDS 49339 49974 . + 0 ID=cds-WP_033866395.1;Parent=gene-AD11_RS11185;Dbxref=GenBank:WP_033866395.1;Name=WP_033866395.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AD11_RS11185;product=endonuclease III;protein_id=WP_033866395.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 50585 52087 . + . ID=gene-AD11_RS11195;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AD11_RS11195;old_locus_tag=AD11_1655 NZ_JJLL01000123.1 Protein Homology CDS 50585 52087 . + 0 ID=cds-WP_000100932.1;Parent=gene-AD11_RS11195;Dbxref=GenBank:WP_000100932.1;Name=WP_000100932.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AD11_RS11195;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100932.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 52193 52798 . + . ID=gene-AD11_RS11200;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AD11_RS11200;old_locus_tag=AD11_1656 NZ_JJLL01000123.1 Protein Homology CDS 52193 52798 . + 0 ID=cds-WP_000765749.1;Parent=gene-AD11_RS11200;Dbxref=GenBank:WP_000765749.1;Name=WP_000765749.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AD11_RS11200;product=glutathione transferase GstA;protein_id=WP_000765749.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 52842 53705 . - . ID=gene-AD11_RS11205;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AD11_RS11205;old_locus_tag=AD11_1657 NZ_JJLL01000123.1 Protein Homology CDS 52842 53705 . - 0 ID=cds-WP_001307229.1;Parent=gene-AD11_RS11205;Dbxref=GenBank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=AD11_RS11205;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 53764 55038 . - . ID=gene-AD11_RS11210;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AD11_RS11210;old_locus_tag=AD11_1658 NZ_JJLL01000123.1 Protein Homology CDS 53764 55038 . - 0 ID=cds-WP_001295400.1;Parent=gene-AD11_RS11210;Dbxref=GenBank:WP_001295400.1;Name=WP_001295400.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AD11_RS11210;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 55167 55823 . - . ID=gene-AD11_RS11215;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AD11_RS11215;old_locus_tag=AD11_1659 NZ_JJLL01000123.1 Protein Homology CDS 55167 55823 . - 0 ID=cds-WP_001282319.1;Parent=gene-AD11_RS11215;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AD11_RS11215;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 55882 56211 . - . ID=gene-AD11_RS11220;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AD11_RS11220;old_locus_tag=AD11_1660 NZ_JJLL01000123.1 Protein Homology CDS 55882 56211 . - 0 ID=cds-WP_000178044.1;Parent=gene-AD11_RS11220;Dbxref=GenBank:WP_000178044.1;Name=WP_000178044.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AD11_RS11220;product=C-type lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 56309 57418 . - . ID=gene-AD11_RS11225;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AD11_RS11225;old_locus_tag=AD11_1661 NZ_JJLL01000123.1 Protein Homology CDS 56309 57418 . - 0 ID=cds-WP_001619493.1;Parent=gene-AD11_RS11225;Dbxref=GenBank:WP_001619493.1;Name=WP_001619493.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AD11_RS11225;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_001619493.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 57692 58159 . + . ID=gene-AD11_RS11230;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AD11_RS11230;old_locus_tag=AD11_1662 NZ_JJLL01000123.1 Protein Homology CDS 57692 58159 . + 0 ID=cds-WP_000597196.1;Parent=gene-AD11_RS11230;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AD11_RS11230;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 58206 58640 . - . ID=gene-AD11_RS11235;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AD11_RS11235;old_locus_tag=AD11_1663 NZ_JJLL01000123.1 Protein Homology CDS 58206 58640 . - 0 ID=cds-WP_001296943.1;Parent=gene-AD11_RS11235;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AD11_RS11235;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 58841 59077 . + . ID=gene-AD11_RS11240;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=AD11_RS11240;old_locus_tag=AD11_1665 NZ_JJLL01000123.1 Protein Homology CDS 58841 59077 . + 0 ID=cds-WP_000670998.1;Parent=gene-AD11_RS11240;Dbxref=GenBank:WP_000670998.1;Name=WP_000670998.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydhI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AD11_RS11240;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 59080 59937 . + . ID=gene-AD11_RS11245;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AD11_RS11245;old_locus_tag=AD11_1666 NZ_JJLL01000123.1 Protein Homology CDS 59080 59937 . + 0 ID=cds-WP_001300356.1;Parent=gene-AD11_RS11245;Dbxref=GenBank:WP_001300356.1;Name=WP_001300356.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416161.4;locus_tag=AD11_RS11245;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001300356.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 59937 61949 . + . ID=gene-AD11_RS11250;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AD11_RS11250;old_locus_tag=AD11_1667 NZ_JJLL01000123.1 Protein Homology CDS 59937 61949 . + 0 ID=cds-WP_000994333.1;Parent=gene-AD11_RS11250;Dbxref=GenBank:WP_000994333.1;Name=WP_000994333.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AD11_RS11250;product=FUSC family protein;protein_id=WP_000994333.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 61950 62471 . - . ID=gene-AD11_RS11255;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AD11_RS11255;old_locus_tag=AD11_1668 NZ_JJLL01000123.1 Protein Homology CDS 61950 62471 . - 0 ID=cds-WP_001296937.1;Parent=gene-AD11_RS11255;Dbxref=GenBank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AD11_RS11255;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 62552 63448 . - . ID=gene-AD11_RS11260;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AD11_RS11260;old_locus_tag=AD11_1669 NZ_JJLL01000123.1 Protein Homology CDS 62552 63448 . - 0 ID=cds-WP_000250656.1;Parent=gene-AD11_RS11260;Dbxref=GenBank:WP_000250656.1;Name=WP_000250656.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AD11_RS11260;product=aldo/keto reductase;protein_id=WP_000250656.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 63497 63736 . - . ID=gene-AD11_RS11265;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AD11_RS11265 NZ_JJLL01000123.1 Protein Homology CDS 63497 63736 . - 0 ID=cds-WP_000840481.1;Parent=gene-AD11_RS11265;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AD11_RS11265;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 63839 64438 . + . ID=gene-AD11_RS11270;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AD11_RS11270;old_locus_tag=AD11_1671 NZ_JJLL01000123.1 Protein Homology CDS 63839 64438 . + 0 ID=cds-WP_001032936.1;Parent=gene-AD11_RS11270;Dbxref=GenBank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AD11_RS11270;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 64475 65572 . + . ID=gene-AD11_RS11275;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AD11_RS11275;old_locus_tag=AD11_1672 NZ_JJLL01000123.1 Protein Homology CDS 64475 65572 . + 0 ID=cds-WP_000093589.1;Parent=gene-AD11_RS11275;Dbxref=GenBank:WP_000093589.1;Name=WP_000093589.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AD11_RS11275;product=N-ethylmaleimide reductase;protein_id=WP_000093589.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 65653 66060 . + . ID=gene-AD11_RS11280;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AD11_RS11280;old_locus_tag=AD11_1673 NZ_JJLL01000123.1 Protein Homology CDS 65653 66060 . + 0 ID=cds-WP_001237796.1;Parent=gene-AD11_RS11280;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AD11_RS11280;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 66163 66810 . + . ID=gene-AD11_RS11285;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AD11_RS11285;old_locus_tag=AD11_1674 NZ_JJLL01000123.1 Protein Homology CDS 66163 66810 . + 0 ID=cds-WP_001282283.1;Parent=gene-AD11_RS11285;Dbxref=GenBank:WP_001282283.1;Name=WP_001282283.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416169.1;locus_tag=AD11_RS11285;product=ribonuclease T;protein_id=WP_001282283.1;transl_table=11 NZ_JJLL01000123.1 RefSeq pseudogene 66903 71518 . + . ID=gene-AD11_RS11290;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=pseudogene;locus_tag=AD11_RS11290;pseudo=true NZ_JJLL01000123.1 Protein Homology CDS 66903 71518 . + 0 ID=cds-AD11_RS11290;Parent=gene-AD11_RS11290;Note=frameshifted;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AD11_RS11290;product=ATP-dependent helicase;pseudo=true;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 71569 71916 . - . ID=gene-AD11_RS11295;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AD11_RS11295;old_locus_tag=AD11_1677 NZ_JJLL01000123.1 Protein Homology CDS 71569 71916 . - 0 ID=cds-WP_000108172.1;Parent=gene-AD11_RS11295;Dbxref=GenBank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AD11_RS11295;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 72250 73065 . + . ID=gene-AD11_RS11300;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AD11_RS11300;old_locus_tag=AD11_1679 NZ_JJLL01000123.1 Protein Homology CDS 72250 73065 . + 0 ID=cds-WP_000101193.1;Parent=gene-AD11_RS11300;Dbxref=GenBank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AD11_RS11300;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 73193 73774 . + . ID=gene-AD11_RS11305;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AD11_RS11305;old_locus_tag=AD11_1680 NZ_JJLL01000123.1 Protein Homology CDS 73193 73774 . + 0 ID=cds-WP_000007283.1;Parent=gene-AD11_RS11305;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AD11_RS11305;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 74009 75184 . - . ID=gene-AD11_RS11310;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AD11_RS11310;old_locus_tag=AD11_1681 NZ_JJLL01000123.1 Protein Homology CDS 74009 75184 . - 0 ID=cds-WP_000701071.1;Parent=gene-AD11_RS11310;Dbxref=GenBank:WP_000701071.1;Name=WP_000701071.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AD11_RS11310;product=MFS transporter;protein_id=WP_000701071.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 75350 75439 . - . ID=gene-AD11_RS11315;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AD11_RS11315;old_locus_tag=AD11_1682 NZ_JJLL01000123.1 Protein Homology CDS 75350 75439 . - 0 ID=cds-WP_000102278.1;Parent=gene-AD11_RS11315;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AD11_RS11315;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 75738 76763 . + . ID=gene-AD11_RS11320;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AD11_RS11320;old_locus_tag=AD11_1683 NZ_JJLL01000123.1 Protein Homology CDS 75738 76763 . + 0 ID=cds-WP_000190982.1;Parent=gene-AD11_RS11320;Dbxref=GenBank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AD11_RS11320;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 76760 77692 . - . ID=gene-AD11_RS11325;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AD11_RS11325;old_locus_tag=AD11_1684 NZ_JJLL01000123.1 Protein Homology CDS 76760 77692 . - 0 ID=cds-WP_000269493.1;Parent=gene-AD11_RS11325;Dbxref=GenBank:WP_000269493.1;Name=WP_000269493.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AD11_RS11325;product=DNA-binding transcriptional activator PunR;protein_id=WP_000269493.1;transl_table=11 NZ_JJLL01000123.1 RefSeq gene 77805 78979 . + . ID=gene-AD11_RS11330;Name=punC;end_range=78979,.;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AD11_RS11330;old_locus_tag=AD11_1685;partial=true NZ_JJLL01000123.1 Protein Homology CDS 77805 78979 . + 0 ID=cds-WP_033866238.1-2;Parent=gene-AD11_RS11330;Dbxref=GenBank:WP_033866238.1;Name=WP_033866238.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;end_range=78979,.;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AD11_RS11330;partial=true;product=purine nucleoside transporter PunC;protein_id=WP_033866238.1;transl_table=11 ##sequence-region NZ_JJLL01000124.1 1 5104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000124.1 RefSeq region 1 5104 . + . ID=NZ_JJLL01000124.1:1..5104;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000124.1 RefSeq pseudogene 1 582 . - . ID=gene-AD11_RS11335;Name=AD11_RS11335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS11335;old_locus_tag=AD11_1686;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000124.1 Protein Homology CDS 1 582 . - 0 ID=cds-AD11_RS11335;Parent=gene-AD11_RS11335;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS11335;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000124.1 RefSeq gene 737 1396 . + . ID=gene-AD11_RS11340;Name=AD11_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS11340;old_locus_tag=AD11_1687 NZ_JJLL01000124.1 Protein Homology CDS 737 1396 . + 0 ID=cds-WP_000412211.1;Parent=gene-AD11_RS11340;Dbxref=GenBank:WP_000412211.1;Name=WP_000412211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152976.1;locus_tag=AD11_RS11340;product=type A-1 chloramphenicol O-acetyltransferase;protein_id=WP_000412211.1;transl_table=11 NZ_JJLL01000124.1 RefSeq gene 1597 1974 . - . ID=gene-AD11_RS11345;Name=AD11_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS11345;old_locus_tag=AD11_1688 NZ_JJLL01000124.1 Protein Homology CDS 1597 1974 . - 0 ID=cds-WP_000656305.1;Parent=gene-AD11_RS11345;Dbxref=GenBank:WP_000656305.1;Name=WP_000656305.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656306.1;locus_tag=AD11_RS11345;product=GNAT family N-acetyltransferase;protein_id=WP_000656305.1;transl_table=11 NZ_JJLL01000124.1 RefSeq pseudogene 2041 4851 . - . ID=gene-AD11_RS11350;Name=AD11_RS11350;end_range=4851,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS11350;old_locus_tag=AD11_1689;partial=true;pseudo=true NZ_JJLL01000124.1 Protein Homology CDS 2041 4851 . - 0 ID=cds-AD11_RS11350;Parent=gene-AD11_RS11350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=4851,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=AD11_RS11350;partial=true;product=Tn3-like element TnAs3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000124.1 RefSeq gene 4899 5104 . - . ID=gene-AD11_RS11355;Name=AD11_RS11355;end_range=5104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS11355;old_locus_tag=AD11_1690;partial=true NZ_JJLL01000124.1 Protein Homology CDS 4899 5104 . - 2 ID=cds-WP_031969424.1;Parent=gene-AD11_RS11355;Dbxref=GenBank:WP_031969424.1;Name=WP_031969424.1;end_range=5104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AD11_RS11355;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_031969424.1;transl_table=11 ##sequence-region NZ_JJLL01000125.1 1 134025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000125.1 RefSeq region 1 134025 . + . ID=NZ_JJLL01000125.1:1..134025;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000125.1 RefSeq gene 1 133 . - . ID=gene-AD11_RS11360;Name=AD11_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS11360;old_locus_tag=AD11_1691;partial=true;start_range=.,1 NZ_JJLL01000125.1 Protein Homology CDS 1 133 . - 0 ID=cds-WP_001322164.1;Parent=gene-AD11_RS11360;Dbxref=GenBank:WP_001322164.1;Name=WP_001322164.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707559.1;locus_tag=AD11_RS11360;partial=true;product=LysR family transcriptional regulator;protein_id=WP_001322164.1;start_range=.,1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 246 1457 . + . ID=gene-AD11_RS11365;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AD11_RS11365;old_locus_tag=AD11_1692 NZ_JJLL01000125.1 Protein Homology CDS 246 1457 . + 0 ID=cds-WP_001182363.1;Parent=gene-AD11_RS11365;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AD11_RS11365;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 1748 2896 . + . ID=gene-AD11_RS11370;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AD11_RS11370;old_locus_tag=AD11_1693 NZ_JJLL01000125.1 Protein Homology CDS 1748 2896 . + 0 ID=cds-WP_000098896.1;Parent=gene-AD11_RS11370;Dbxref=GenBank:WP_000098896.1;Name=WP_000098896.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AD11_RS11370;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098896.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 2936 3577 . - . ID=gene-AD11_RS11375;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AD11_RS11375;old_locus_tag=AD11_1694 NZ_JJLL01000125.1 Protein Homology CDS 2936 3577 . - 0 ID=cds-WP_000493947.1;Parent=gene-AD11_RS11375;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AD11_RS11375;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 3792 5165 . + . ID=gene-AD11_RS11380;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AD11_RS11380;old_locus_tag=AD11_1695 NZ_JJLL01000125.1 Protein Homology CDS 3792 5165 . + 0 ID=cds-WP_001174940.1;Parent=gene-AD11_RS11380;Dbxref=GenBank:WP_001174940.1;Name=WP_001174940.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AD11_RS11380;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001174940.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 5206 6462 . - . ID=gene-AD11_RS11385;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AD11_RS11385;old_locus_tag=AD11_1696 NZ_JJLL01000125.1 Protein Homology CDS 5206 6462 . - 0 ID=cds-WP_000534271.1;Parent=gene-AD11_RS11385;Dbxref=GenBank:WP_000534271.1;Name=WP_000534271.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AD11_RS11385;product=AIDA repeat-containing protein;protein_id=WP_000534271.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 6770 6846 . + . ID=gene-AD11_RS11390;Name=AD11_RS11390;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS11390;old_locus_tag=AD11_1697 NZ_JJLL01000125.1 tRNAscan-SE tRNA 6770 6846 . + . ID=rna-AD11_RS11390;Parent=gene-AD11_RS11390;anticodon=(pos:6804..6806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS11390;product=tRNA-Val NZ_JJLL01000125.1 tRNAscan-SE exon 6770 6846 . + . ID=exon-AD11_RS11390-1;Parent=rna-AD11_RS11390;anticodon=(pos:6804..6806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS11390;product=tRNA-Val NZ_JJLL01000125.1 RefSeq gene 6851 6927 . + . ID=gene-AD11_RS11395;Name=AD11_RS11395;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS11395;old_locus_tag=AD11_1698 NZ_JJLL01000125.1 tRNAscan-SE tRNA 6851 6927 . + . ID=rna-AD11_RS11395;Parent=gene-AD11_RS11395;anticodon=(pos:6885..6887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS11395;product=tRNA-Val NZ_JJLL01000125.1 tRNAscan-SE exon 6851 6927 . + . ID=exon-AD11_RS11395-1;Parent=rna-AD11_RS11395;anticodon=(pos:6885..6887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS11395;product=tRNA-Val NZ_JJLL01000125.1 RefSeq gene 7035 7340 . + . ID=gene-AD11_RS11400;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AD11_RS11400;old_locus_tag=AD11_1699 NZ_JJLL01000125.1 Protein Homology CDS 7035 7340 . + 0 ID=cds-WP_000212657.1;Parent=gene-AD11_RS11400;Dbxref=GenBank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AD11_RS11400;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 7466 9070 . + . ID=gene-AD11_RS11405;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=AD11_RS11405;old_locus_tag=AD11_1700 NZ_JJLL01000125.1 Protein Homology CDS 7466 9070 . + 0 ID=cds-WP_000716950.1;Parent=gene-AD11_RS11405;Dbxref=GenBank:WP_000716950.1;Name=WP_000716950.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416183.1;locus_tag=AD11_RS11405;product=FAD-NAD(P)-binding protein;protein_id=WP_000716950.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 9082 9894 . - . ID=gene-AD11_RS11410;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AD11_RS11410;old_locus_tag=AD11_1701 NZ_JJLL01000125.1 Protein Homology CDS 9082 9894 . - 0 ID=cds-WP_000587525.1;Parent=gene-AD11_RS11410;Dbxref=GenBank:WP_000587525.1;Name=WP_000587525.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AD11_RS11410;product=protein YdhT;protein_id=WP_000587525.1;transl_table=11 NZ_JJLL01000125.1 RefSeq pseudogene 9898 10682 . - . ID=gene-AD11_RS11415;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=pseudogene;locus_tag=AD11_RS11415;old_locus_tag=AD11_1702;pseudo=true NZ_JJLL01000125.1 Protein Homology CDS 9898 10682 . - 0 ID=cds-AD11_RS11415;Parent=gene-AD11_RS11415;Note=frameshifted;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416185.1;locus_tag=AD11_RS11415;product=thiosulfate reductase cytochrome B subunit;pseudo=true;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 10679 11347 . - . ID=gene-AD11_RS11420;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AD11_RS11420;old_locus_tag=AD11_1703 NZ_JJLL01000125.1 Protein Homology CDS 10679 11347 . - 0 ID=cds-WP_001310861.1;Parent=gene-AD11_RS11420;Dbxref=GenBank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AD11_RS11420;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001310861.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 11411 12049 . - . ID=gene-AD11_RS11425;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AD11_RS11425;old_locus_tag=AD11_1704 NZ_JJLL01000125.1 Protein Homology CDS 11411 12049 . - 0 ID=cds-WP_001413308.1;Parent=gene-AD11_RS11425;Dbxref=GenBank:WP_001413308.1;Name=WP_001413308.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AD11_RS11425;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001413308.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 12062 14164 . - . ID=gene-AD11_RS11430;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AD11_RS11430;old_locus_tag=AD11_1705 NZ_JJLL01000125.1 Protein Homology CDS 12062 14164 . - 0 ID=cds-WP_001273527.1;Parent=gene-AD11_RS11430;Dbxref=GenBank:WP_001273527.1;Name=WP_001273527.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=AD11_RS11430;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273527.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 14185 14811 . - . ID=gene-AD11_RS11435;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AD11_RS11435;old_locus_tag=AD11_1706 NZ_JJLL01000125.1 Protein Homology CDS 14185 14811 . - 0 ID=cds-WP_001070230.1;Parent=gene-AD11_RS11435;Dbxref=GenBank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AD11_RS11435;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 15266 15475 . - . ID=gene-AD11_RS11440;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AD11_RS11440;old_locus_tag=AD11_1708 NZ_JJLL01000125.1 Protein Homology CDS 15266 15475 . - 0 ID=cds-WP_000528342.1;Parent=gene-AD11_RS11440;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AD11_RS11440;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 15830 16024 . + . ID=gene-AD11_RS32550;Name=AD11_RS32550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32550 NZ_JJLL01000125.1 Protein Homology CDS 15830 16024 . + 0 ID=cds-WP_240806354.1;Parent=gene-AD11_RS32550;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AD11_RS32550;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 16032 17444 . + . ID=gene-AD11_RS11445;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AD11_RS11445;old_locus_tag=AD11_1709 NZ_JJLL01000125.1 Protein Homology CDS 16032 17444 . + 0 ID=cds-WP_001295403.1;Parent=gene-AD11_RS11445;Dbxref=GenBank:WP_001295403.1;Name=WP_001295403.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AD11_RS11445;product=pyruvate kinase PykF;protein_id=WP_001295403.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 17755 17991 . + . ID=gene-AD11_RS11450;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AD11_RS11450;old_locus_tag=AD11_1710 NZ_JJLL01000125.1 Protein Homology CDS 17755 17991 . + 0 ID=cds-WP_000648420.1;Parent=gene-AD11_RS11450;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AD11_RS11450;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 18055 19059 . - . ID=gene-AD11_RS11455;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AD11_RS11455;old_locus_tag=AD11_1711 NZ_JJLL01000125.1 Protein Homology CDS 18055 19059 . - 0 ID=cds-WP_033865476.1;Parent=gene-AD11_RS11455;Dbxref=GenBank:WP_033865476.1;Name=WP_033865476.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416193.1;locus_tag=AD11_RS11455;product=L%2CD-transpeptidase LdtE;protein_id=WP_033865476.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 19208 19624 . - . ID=gene-AD11_RS11460;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AD11_RS11460;old_locus_tag=AD11_1712 NZ_JJLL01000125.1 Protein Homology CDS 19208 19624 . - 0 ID=cds-WP_001196530.1;Parent=gene-AD11_RS11460;Dbxref=GenBank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AD11_RS11460;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 19637 20857 . - . ID=gene-AD11_RS11465;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AD11_RS11465;old_locus_tag=AD11_1713 NZ_JJLL01000125.1 Protein Homology CDS 19637 20857 . - 0 ID=cds-WP_000144539.1;Parent=gene-AD11_RS11465;Dbxref=GenBank:WP_000144539.1;Name=WP_000144539.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=AD11_RS11465;product=cysteine desulfurase SufS;protein_id=WP_000144539.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 20854 22125 . - . ID=gene-AD11_RS11470;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AD11_RS11470;old_locus_tag=AD11_1714 NZ_JJLL01000125.1 Protein Homology CDS 20854 22125 . - 0 ID=cds-WP_000907948.1;Parent=gene-AD11_RS11470;Dbxref=GenBank:WP_000907948.1;Name=WP_000907948.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707580.1;locus_tag=AD11_RS11470;product=Fe-S cluster assembly protein SufD;protein_id=WP_000907948.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 22100 22846 . - . ID=gene-AD11_RS11475;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AD11_RS11475;old_locus_tag=AD11_1715 NZ_JJLL01000125.1 Protein Homology CDS 22100 22846 . - 0 ID=cds-WP_000948863.1;Parent=gene-AD11_RS11475;Dbxref=GenBank:WP_000948863.1;Name=WP_000948863.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AD11_RS11475;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948863.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 22856 24343 . - . ID=gene-AD11_RS11480;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AD11_RS11480;old_locus_tag=AD11_1716 NZ_JJLL01000125.1 Protein Homology CDS 22856 24343 . - 0 ID=cds-WP_000089364.1;Parent=gene-AD11_RS11480;Dbxref=GenBank:WP_000089364.1;Name=WP_000089364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AD11_RS11480;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089364.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 24352 24720 . - . ID=gene-AD11_RS11485;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AD11_RS11485;old_locus_tag=AD11_1717 NZ_JJLL01000125.1 Protein Homology CDS 24352 24720 . - 0 ID=cds-WP_000367160.1;Parent=gene-AD11_RS11485;Dbxref=GenBank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AD11_RS11485;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 25269 25457 . - . ID=gene-AD11_RS11490;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=AD11_RS11490;old_locus_tag=AD11_1718 NZ_JJLL01000125.1 Protein Homology CDS 25269 25457 . - 0 ID=cds-WP_001296104.1;Parent=gene-AD11_RS11490;Dbxref=GenBank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AD11_RS11490;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 25557 25967 . - . ID=gene-AD11_RS11495;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AD11_RS11495;old_locus_tag=AD11_1719 NZ_JJLL01000125.1 Protein Homology CDS 25557 25967 . - 0 ID=cds-WP_000637986.1;Parent=gene-AD11_RS11495;Dbxref=GenBank:WP_000637986.1;Name=WP_000637986.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AD11_RS11495;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637986.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 25964 29020 . - . ID=gene-AD11_RS11500;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AD11_RS11500;old_locus_tag=AD11_1720 NZ_JJLL01000125.1 Protein Homology CDS 25964 29020 . - 0 ID=cds-WP_001619501.1;Parent=gene-AD11_RS11500;Dbxref=GenBank:WP_001619501.1;Name=WP_001619501.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310421.1;locus_tag=AD11_RS11500;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_001619501.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 29409 30521 . + . ID=gene-AD11_RS11505;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AD11_RS11505;old_locus_tag=AD11_1721 NZ_JJLL01000125.1 Protein Homology CDS 29409 30521 . + 0 ID=cds-WP_000248636.1;Parent=gene-AD11_RS11505;Dbxref=GenBank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AD11_RS11505;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 30707 30814 . + . ID=gene-AD11_RS27635;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AD11_RS27635 NZ_JJLL01000125.1 cmsearch antisense_RNA 30707 30814 . + . ID=rna-AD11_RS27635;Parent=gene-AD11_RS27635;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27635;product=antisense sRNA RprA NZ_JJLL01000125.1 cmsearch exon 30707 30814 . + . ID=exon-AD11_RS27635-1;Parent=rna-AD11_RS27635;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27635;product=antisense sRNA RprA NZ_JJLL01000125.1 RefSeq gene 30950 31306 . + . ID=gene-AD11_RS11510;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AD11_RS11510;old_locus_tag=AD11_1722 NZ_JJLL01000125.1 Protein Homology CDS 30950 31306 . + 0 ID=cds-WP_001310864.1;Parent=gene-AD11_RS11510;Dbxref=GenBank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AD11_RS11510;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 31406 32620 . + . ID=gene-AD11_RS11515;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=AD11_RS11515;old_locus_tag=AD11_1723 NZ_JJLL01000125.1 Protein Homology CDS 31406 32620 . + 0 ID=cds-WP_001619504.1;Parent=gene-AD11_RS11515;Dbxref=GenBank:WP_001619504.1;Name=WP_001619504.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiM;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AD11_RS11515;product=MFS transporter;protein_id=WP_001619504.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 32847 34112 . + . ID=gene-AD11_RS11520;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AD11_RS11520;old_locus_tag=AD11_1724 NZ_JJLL01000125.1 Protein Homology CDS 32847 34112 . + 0 ID=cds-WP_001301286.1;Parent=gene-AD11_RS11520;Dbxref=GenBank:WP_001301286.1;Name=WP_001301286.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416206.6;locus_tag=AD11_RS11520;product=MFS transporter;protein_id=WP_001301286.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 34124 34990 . + . ID=gene-AD11_RS11525;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AD11_RS11525;old_locus_tag=AD11_1725 NZ_JJLL01000125.1 Protein Homology CDS 34124 34990 . + 0 ID=cds-WP_001639569.1;Parent=gene-AD11_RS11525;Dbxref=GenBank:WP_001639569.1;Name=WP_001639569.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AD11_RS11525;product=quinate/shikimate dehydrogenase;protein_id=WP_001639569.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 35021 35779 . + . ID=gene-AD11_RS11530;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AD11_RS11530;old_locus_tag=AD11_1726 NZ_JJLL01000125.1 Protein Homology CDS 35021 35779 . + 0 ID=cds-WP_000860163.1;Parent=gene-AD11_RS11530;Dbxref=GenBank:WP_000860163.1;Name=WP_000860163.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707592.1;locus_tag=AD11_RS11530;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860163.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 35924 37519 . + . ID=gene-AD11_RS11535;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=AD11_RS11535;old_locus_tag=AD11_1727 NZ_JJLL01000125.1 Protein Homology CDS 35924 37519 . + 0 ID=cds-WP_000805640.1;Parent=gene-AD11_RS11535;Dbxref=GenBank:WP_000805640.1;Name=WP_000805640.1;gbkey=CDS;gene=ydiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=AD11_RS11535;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000805640.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 37533 38684 . + . ID=gene-AD11_RS11540;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AD11_RS11540;old_locus_tag=AD11_1728 NZ_JJLL01000125.1 Protein Homology CDS 37533 38684 . + 0 ID=cds-WP_000347850.1;Parent=gene-AD11_RS11540;Dbxref=GenBank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AD11_RS11540;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 38727 39638 . - . ID=gene-AD11_RS11545;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=protein_coding;locus_tag=AD11_RS11545;old_locus_tag=AD11_1729 NZ_JJLL01000125.1 Protein Homology CDS 38727 39638 . - 0 ID=cds-WP_000284783.1;Parent=gene-AD11_RS11545;Dbxref=GenBank:WP_000284783.1;Name=WP_000284783.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ydiP;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310430.1;locus_tag=AD11_RS11545;product=AraC family transcriptional regulator;protein_id=WP_000284783.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 39954 40718 . + . ID=gene-AD11_RS11555;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;locus_tag=AD11_RS11555;old_locus_tag=AD11_1731 NZ_JJLL01000125.1 Protein Homology CDS 39954 40718 . + 0 ID=cds-WP_033865478.1;Parent=gene-AD11_RS11555;Dbxref=GenBank:WP_033865478.1;Name=WP_033865478.1;gbkey=CDS;gene=ydiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310431.1;locus_tag=AD11_RS11555;product=electron transfer flavoprotein;protein_id=WP_033865478.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 40738 41676 . + . ID=gene-AD11_RS11560;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;locus_tag=AD11_RS11560;old_locus_tag=AD11_1732 NZ_JJLL01000125.1 Protein Homology CDS 40738 41676 . + 0 ID=cds-WP_001619509.1;Parent=gene-AD11_RS11560;Dbxref=GenBank:WP_001619509.1;Name=WP_001619509.1;gbkey=CDS;gene=ydiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310432.1;locus_tag=AD11_RS11560;product=electron transfer flavoprotein subunit alpha;protein_id=WP_001619509.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 41733 43022 . + . ID=gene-AD11_RS11565;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=AD11_RS11565;old_locus_tag=AD11_1733 NZ_JJLL01000125.1 Protein Homology CDS 41733 43022 . + 0 ID=cds-WP_001619510.1;Parent=gene-AD11_RS11565;Dbxref=GenBank:WP_001619510.1;Name=WP_001619510.1;gbkey=CDS;gene=ydiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416214.1;locus_tag=AD11_RS11565;product=FAD-dependent oxidoreductase;protein_id=WP_001619510.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 43019 43312 . + . ID=gene-AD11_RS11570;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=AD11_RS11570;old_locus_tag=AD11_1734 NZ_JJLL01000125.1 Protein Homology CDS 43019 43312 . + 0 ID=cds-WP_000081071.1;Parent=gene-AD11_RS11570;Dbxref=GenBank:WP_000081071.1;Name=WP_000081071.1;gbkey=CDS;gene=ydiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310434.1;locus_tag=AD11_RS11570;product=ferredoxin family protein;protein_id=WP_000081071.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 43369 45015 . + . ID=gene-AD11_RS11575;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=AD11_RS11575;old_locus_tag=AD11_1735 NZ_JJLL01000125.1 Protein Homology CDS 43369 45015 . + 0 ID=cds-WP_001459793.1;Parent=gene-AD11_RS11575;Dbxref=GenBank:WP_001459793.1;Name=WP_001459793.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AD11_RS11575;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_001459793.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 45072 47450 . - . ID=gene-AD11_RS11580;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AD11_RS11580;old_locus_tag=AD11_1736 NZ_JJLL01000125.1 Protein Homology CDS 45072 47450 . - 0 ID=cds-WP_000069375.1;Parent=gene-AD11_RS11580;Dbxref=GenBank:WP_000069375.1;Name=WP_000069375.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AD11_RS11580;product=phosphoenolpyruvate synthase;protein_id=WP_000069375.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 47783 48616 . + . ID=gene-AD11_RS11590;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AD11_RS11590;old_locus_tag=AD11_1738 NZ_JJLL01000125.1 Protein Homology CDS 47783 48616 . + 0 ID=cds-WP_000368046.1;Parent=gene-AD11_RS11590;Dbxref=GenBank:WP_000368046.1;Name=WP_000368046.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AD11_RS11590;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000368046.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 48773 49819 . + . ID=gene-AD11_RS11595;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AD11_RS11595;old_locus_tag=AD11_1739 NZ_JJLL01000125.1 Protein Homology CDS 48773 49819 . + 0 ID=cds-WP_033866405.1;Parent=gene-AD11_RS11595;Dbxref=GenBank:WP_033866405.1;Name=WP_033866405.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310438.1;locus_tag=AD11_RS11595;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_033866405.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 49951 50142 . + . ID=gene-AD11_RS11600;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AD11_RS11600;old_locus_tag=AD11_1740 NZ_JJLL01000125.1 Protein Homology CDS 49951 50142 . + 0 ID=cds-WP_001270809.1;Parent=gene-AD11_RS11600;Dbxref=GenBank:WP_001270809.1;Name=WP_001270809.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AD11_RS11600;product=hemin uptake protein HemP;protein_id=WP_001270809.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 50146 51582 . - . ID=gene-AD11_RS11605;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AD11_RS11605;old_locus_tag=AD11_1741 NZ_JJLL01000125.1 Protein Homology CDS 50146 51582 . - 0 ID=cds-WP_021559249.1;Parent=gene-AD11_RS11605;Dbxref=GenBank:WP_021559249.1;Name=WP_021559249.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310440.1;locus_tag=AD11_RS11605;product=protein adenylyltransferase SelO;protein_id=WP_021559249.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 51645 52358 . - . ID=gene-AD11_RS11610;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AD11_RS11610;old_locus_tag=AD11_1742 NZ_JJLL01000125.1 Protein Homology CDS 51645 52358 . - 0 ID=cds-WP_001619515.1;Parent=gene-AD11_RS11610;Dbxref=GenBank:WP_001619515.1;Name=WP_001619515.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707407.1;locus_tag=AD11_RS11610;product=anti-FlhDC factor;protein_id=WP_001619515.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 52605 53069 . - . ID=gene-AD11_RS11615;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AD11_RS11615;old_locus_tag=AD11_1743 NZ_JJLL01000125.1 Protein Homology CDS 52605 53069 . - 0 ID=cds-WP_001209795.1;Parent=gene-AD11_RS11615;Dbxref=GenBank:WP_001209795.1;Name=WP_001209795.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=nlpC;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416223.1;locus_tag=AD11_RS11615;product=C40 family peptidase;protein_id=WP_001209795.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 53147 53896 . - . ID=gene-AD11_RS11620;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AD11_RS11620;old_locus_tag=AD11_1744 NZ_JJLL01000125.1 Protein Homology CDS 53147 53896 . - 0 ID=cds-WP_032083498.1;Parent=gene-AD11_RS11620;Dbxref=GenBank:WP_032083498.1;Name=WP_032083498.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AD11_RS11620;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_032083498.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 53896 54447 . - . ID=gene-AD11_RS11625;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AD11_RS11625;old_locus_tag=AD11_1745 NZ_JJLL01000125.1 Protein Homology CDS 53896 54447 . - 0 ID=cds-WP_001154183.1;Parent=gene-AD11_RS11625;Dbxref=GenBank:WP_001154183.1;Name=WP_001154183.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707404.1;locus_tag=AD11_RS11625;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154183.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 54510 55490 . - . ID=gene-AD11_RS11630;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AD11_RS11630;old_locus_tag=AD11_1746 NZ_JJLL01000125.1 Protein Homology CDS 54510 55490 . - 0 ID=cds-WP_000956529.1;Parent=gene-AD11_RS11630;Dbxref=GenBank:WP_000956529.1;Name=WP_000956529.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AD11_RS11630;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956529.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 55591 55890 . - . ID=gene-AD11_RS11635;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AD11_RS11635;old_locus_tag=AD11_1747 NZ_JJLL01000125.1 Protein Homology CDS 55591 55890 . - 0 ID=cds-WP_001229265.1;Parent=gene-AD11_RS11635;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AD11_RS11635;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 55895 58282 . - . ID=gene-AD11_RS11640;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AD11_RS11640;old_locus_tag=AD11_1748 NZ_JJLL01000125.1 Protein Homology CDS 55895 58282 . - 0 ID=cds-WP_033865481.1;Parent=gene-AD11_RS11640;Dbxref=GenBank:WP_033865481.1;Name=WP_033865481.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416228.1;locus_tag=AD11_RS11640;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_033865481.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 58297 59280 . - . ID=gene-AD11_RS11645;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AD11_RS11645;old_locus_tag=AD11_1749 NZ_JJLL01000125.1 Protein Homology CDS 58297 59280 . - 0 ID=cds-WP_000018596.1;Parent=gene-AD11_RS11645;Dbxref=GenBank:WP_000018596.1;Name=WP_000018596.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AD11_RS11645;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018596.1;transl_table=11 NZ_JJLL01000125.1 cmsearch sequence_feature 59489 59613 . - . ID=id-NZ_JJLL01000125.1:59489..59613;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLL01000125.1 RefSeq gene 59563 59607 . - . ID=gene-AD11_RS31570;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AD11_RS31570 NZ_JJLL01000125.1 Protein Homology CDS 59563 59607 . - 0 ID=cds-WP_001386830.1;Parent=gene-AD11_RS31570;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AD11_RS31570;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 59730 60086 . - . ID=gene-AD11_RS11655;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AD11_RS11655;old_locus_tag=AD11_1750 NZ_JJLL01000125.1 Protein Homology CDS 59730 60086 . - 0 ID=cds-WP_000124850.1;Parent=gene-AD11_RS11655;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AD11_RS11655;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 60139 60336 . - . ID=gene-AD11_RS11660;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AD11_RS11660;old_locus_tag=AD11_1751 NZ_JJLL01000125.1 Protein Homology CDS 60139 60336 . - 0 ID=cds-WP_001124225.1;Parent=gene-AD11_RS11660;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AD11_RS11660;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 60433 60975 . - . ID=gene-AD11_RS11665;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AD11_RS11665 NZ_JJLL01000125.1 Protein Homology CDS 60433 60975 . - 0 ID=cds-WP_001700733.1;Parent=gene-AD11_RS11665;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AD11_RS11665;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 60979 62907 . - . ID=gene-AD11_RS11670;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AD11_RS11670;old_locus_tag=AD11_1753 NZ_JJLL01000125.1 Protein Homology CDS 60979 62907 . - 0 ID=cds-WP_001144202.1;Parent=gene-AD11_RS11670;Dbxref=GenBank:WP_001144202.1;Name=WP_001144202.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AD11_RS11670;product=threonine--tRNA ligase;protein_id=WP_001144202.1;transl_table=11 NZ_JJLL01000125.1 RefSeq pseudogene 63431 65330 . + . ID=gene-AD11_RS11675;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=pseudogene;locus_tag=AD11_RS11675;old_locus_tag=AD11_1755;pseudo=true NZ_JJLL01000125.1 Protein Homology CDS 63431 65330 . + 0 ID=cds-AD11_RS11675;Parent=gene-AD11_RS11675;Note=frameshifted;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AD11_RS11675;product=type III secretion system effector EspL1;pseudo=true;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 65502 65609 . + . ID=gene-AD11_RS11680;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AD11_RS11680;old_locus_tag=AD11_1756 NZ_JJLL01000125.1 Protein Homology CDS 65502 65609 . + 0 ID=cds-WP_001142445.1;Parent=gene-AD11_RS11680;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AD11_RS11680;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 65662 66420 . - . ID=gene-AD11_RS11685;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AD11_RS11685;old_locus_tag=AD11_1757 NZ_JJLL01000125.1 Protein Homology CDS 65662 66420 . - 0 ID=cds-WP_000771391.1;Parent=gene-AD11_RS11685;Dbxref=GenBank:WP_000771391.1;Name=WP_000771391.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416236.1;locus_tag=AD11_RS11685;product=DUF481 domain-containing protein;protein_id=WP_000771391.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 66707 67636 . + . ID=gene-AD11_RS11690;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AD11_RS11690;old_locus_tag=AD11_1758 NZ_JJLL01000125.1 Protein Homology CDS 66707 67636 . + 0 ID=cds-WP_000251727.1;Parent=gene-AD11_RS11690;Dbxref=GenBank:WP_000251727.1;Name=WP_000251727.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416237.3;locus_tag=AD11_RS11690;product=6-phosphofructokinase II;protein_id=WP_000251727.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 67737 68027 . + . ID=gene-AD11_RS11695;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AD11_RS11695;old_locus_tag=AD11_1759 NZ_JJLL01000125.1 Protein Homology CDS 67737 68027 . + 0 ID=cds-WP_000146159.1;Parent=gene-AD11_RS11695;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AD11_RS11695;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 68133 68993 . + . ID=gene-AD11_RS11700;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AD11_RS11700;old_locus_tag=AD11_1760 NZ_JJLL01000125.1 Protein Homology CDS 68133 68993 . + 0 ID=cds-WP_001619517.1;Parent=gene-AD11_RS11700;Dbxref=GenBank:WP_001619517.1;Name=WP_001619517.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416239.1;locus_tag=AD11_RS11700;product=fructosamine kinase family protein;protein_id=WP_001619517.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 69034 69570 . - . ID=gene-AD11_RS11705;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AD11_RS11705;old_locus_tag=AD11_1761 NZ_JJLL01000125.1 Protein Homology CDS 69034 69570 . - 0 ID=cds-WP_000222172.1;Parent=gene-AD11_RS11705;Dbxref=GenBank:WP_000222172.1;Name=WP_000222172.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AD11_RS11705;product=YniB family protein;protein_id=WP_000222172.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 69717 70385 . + . ID=gene-AD11_RS11710;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AD11_RS11710;old_locus_tag=AD11_1762 NZ_JJLL01000125.1 Protein Homology CDS 69717 70385 . + 0 ID=cds-WP_000106833.1;Parent=gene-AD11_RS11710;Dbxref=GenBank:WP_000106833.1;Name=WP_000106833.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416241.1;locus_tag=AD11_RS11710;product=hexitol phosphatase HxpB;protein_id=WP_000106833.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 70548 71138 . + . ID=gene-AD11_RS11715;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AD11_RS11715;old_locus_tag=AD11_1763 NZ_JJLL01000125.1 Protein Homology CDS 70548 71138 . + 0 ID=cds-WP_001297653.1;Parent=gene-AD11_RS11715;Dbxref=GenBank:WP_001297653.1;Name=WP_001297653.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707386.2;locus_tag=AD11_RS11715;product=metal-dependent hydrolase;protein_id=WP_001297653.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 71271 72662 . + . ID=gene-AD11_RS11720;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AD11_RS11720;old_locus_tag=AD11_1764 NZ_JJLL01000125.1 Protein Homology CDS 71271 72662 . + 0 ID=cds-WP_001010696.1;Parent=gene-AD11_RS11720;Dbxref=GenBank:WP_001010696.1;Name=WP_001010696.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416243.1;locus_tag=AD11_RS11720;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010696.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 72687 73469 . - . ID=gene-AD11_RS11725;Name=ydjO;gbkey=Gene;gene=ydjO;gene_biotype=protein_coding;locus_tag=AD11_RS11725;old_locus_tag=AD11_1765 NZ_JJLL01000125.1 Protein Homology CDS 72687 73469 . - 0 ID=cds-WP_001469620.1;Parent=gene-AD11_RS11725;Dbxref=GenBank:WP_001469620.1;Name=WP_001469620.1;gbkey=CDS;gene=ydjO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000493143.1;locus_tag=AD11_RS11725;product=protein YdjO;protein_id=WP_001469620.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 73757 74020 . - . ID=gene-AD11_RS11730;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AD11_RS11730;old_locus_tag=AD11_1766 NZ_JJLL01000125.1 Protein Homology CDS 73757 74020 . - 0 ID=cds-WP_001241551.1;Parent=gene-AD11_RS11730;Dbxref=GenBank:WP_001241551.1;Name=WP_001241551.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AD11_RS11730;product=cell division activator CedA;protein_id=WP_001241551.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 74203 76464 . + . ID=gene-AD11_RS11735;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AD11_RS11735;old_locus_tag=AD11_1767 NZ_JJLL01000125.1 Protein Homology CDS 74203 76464 . + 0 ID=cds-WP_000077873.1;Parent=gene-AD11_RS11735;Dbxref=GenBank:WP_000077873.1;Name=WP_000077873.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=AD11_RS11735;product=catalase HPII;protein_id=WP_000077873.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 76722 77471 . - . ID=gene-AD11_RS11740;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AD11_RS11740;old_locus_tag=AD11_1768 NZ_JJLL01000125.1 Protein Homology CDS 76722 77471 . - 0 ID=cds-WP_000440471.1;Parent=gene-AD11_RS11740;Dbxref=GenBank:WP_000440471.1;Name=WP_000440471.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416247.1;locus_tag=AD11_RS11740;product=chitin disaccharide deacetylase;protein_id=WP_000440471.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 77484 78836 . - . ID=gene-AD11_RS11745;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AD11_RS11745;old_locus_tag=AD11_1769 NZ_JJLL01000125.1 Protein Homology CDS 77484 78836 . - 0 ID=cds-WP_001397366.1;Parent=gene-AD11_RS11745;Dbxref=GenBank:WP_001397366.1;Name=WP_001397366.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416248.1;locus_tag=AD11_RS11745;product=6-phospho-beta-glucosidase;protein_id=WP_001397366.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 78941 79783 . - . ID=gene-AD11_RS11750;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AD11_RS11750;old_locus_tag=AD11_1770 NZ_JJLL01000125.1 Protein Homology CDS 78941 79783 . - 0 ID=cds-WP_000983647.1;Parent=gene-AD11_RS11750;Dbxref=GenBank:WP_000983647.1;Name=WP_000983647.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AD11_RS11750;product=transcriptional regulator ChbR;protein_id=WP_000983647.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 79791 80141 . - . ID=gene-AD11_RS11755;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AD11_RS11755;old_locus_tag=AD11_1771 NZ_JJLL01000125.1 Protein Homology CDS 79791 80141 . - 0 ID=cds-WP_000968919.1;Parent=gene-AD11_RS11755;Dbxref=GenBank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AD11_RS11755;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 80192 81550 . - . ID=gene-AD11_RS11760;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AD11_RS11760;old_locus_tag=AD11_1772 NZ_JJLL01000125.1 Protein Homology CDS 80192 81550 . - 0 ID=cds-WP_000073041.1;Parent=gene-AD11_RS11760;Dbxref=GenBank:WP_000073041.1;Name=WP_000073041.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AD11_RS11760;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073041.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 81635 81955 . - . ID=gene-AD11_RS11765;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AD11_RS11765;old_locus_tag=AD11_1773 NZ_JJLL01000125.1 Protein Homology CDS 81635 81955 . - 0 ID=cds-WP_000412169.1;Parent=gene-AD11_RS11765;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AD11_RS11765;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 82254 82592 . - . ID=gene-AD11_RS11770;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AD11_RS11770;old_locus_tag=AD11_1774 NZ_JJLL01000125.1 Protein Homology CDS 82254 82592 . - 0 ID=cds-WP_001039044.1;Parent=gene-AD11_RS11770;Dbxref=GenBank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AD11_RS11770;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 82794 83621 . + . ID=gene-AD11_RS11775;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AD11_RS11775;old_locus_tag=AD11_1775 NZ_JJLL01000125.1 Protein Homology CDS 82794 83621 . + 0 ID=cds-WP_000175026.1;Parent=gene-AD11_RS11775;Dbxref=GenBank:WP_000175026.1;Name=WP_000175026.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416254.1;locus_tag=AD11_RS11775;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175026.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 83851 84738 . + . ID=gene-AD11_RS11785;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AD11_RS11785;old_locus_tag=AD11_1776 NZ_JJLL01000125.1 Protein Homology CDS 83851 84738 . + 0 ID=cds-WP_000252397.1;Parent=gene-AD11_RS11785;Dbxref=GenBank:WP_000252397.1;Name=WP_000252397.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416255.1;locus_tag=AD11_RS11785;product=excinuclease Cho;protein_id=WP_000252397.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 84698 85273 . - . ID=gene-AD11_RS11790;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AD11_RS11790;old_locus_tag=AD11_1777 NZ_JJLL01000125.1 Protein Homology CDS 84698 85273 . - 0 ID=cds-WP_001300480.1;Parent=gene-AD11_RS11790;Dbxref=GenBank:WP_001300480.1;Name=WP_001300480.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416256.2;locus_tag=AD11_RS11790;product=environmental stress-induced protein Ves;protein_id=WP_001300480.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 85476 85961 . - . ID=gene-AD11_RS11795;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AD11_RS11795;old_locus_tag=AD11_1778 NZ_JJLL01000125.1 Protein Homology CDS 85476 85961 . - 0 ID=cds-WP_001228984.1;Parent=gene-AD11_RS11795;Dbxref=GenBank:WP_001228984.1;Name=WP_001228984.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416257.1;locus_tag=AD11_RS11795;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228984.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 86291 87259 . - . ID=gene-AD11_RS11800;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AD11_RS11800;old_locus_tag=AD11_1779 NZ_JJLL01000125.1 Protein Homology CDS 86291 87259 . - 0 ID=cds-WP_033865482.1;Parent=gene-AD11_RS11800;Dbxref=GenBank:WP_033865482.1;Name=WP_033865482.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AD11_RS11800;product=succinylglutamate desuccinylase;protein_id=WP_033865482.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 87252 88595 . - . ID=gene-AD11_RS11805;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AD11_RS11805;old_locus_tag=AD11_1780 NZ_JJLL01000125.1 Protein Homology CDS 87252 88595 . - 0 ID=cds-WP_033865483.1;Parent=gene-AD11_RS11805;Dbxref=GenBank:WP_033865483.1;Name=WP_033865483.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AD11_RS11805;product=N-succinylarginine dihydrolase;protein_id=WP_033865483.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 88592 90070 . - . ID=gene-AD11_RS11810;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AD11_RS11810;old_locus_tag=AD11_1781 NZ_JJLL01000125.1 Protein Homology CDS 88592 90070 . - 0 ID=cds-WP_000177254.1;Parent=gene-AD11_RS11810;Dbxref=GenBank:WP_000177254.1;Name=WP_000177254.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416260.1;locus_tag=AD11_RS11810;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_000177254.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 90067 91101 . - . ID=gene-AD11_RS11815;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AD11_RS11815;old_locus_tag=AD11_1782 NZ_JJLL01000125.1 Protein Homology CDS 90067 91101 . - 0 ID=cds-WP_000989419.1;Parent=gene-AD11_RS11815;Dbxref=GenBank:WP_000989419.1;Name=WP_000989419.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AD11_RS11815;product=arginine N-succinyltransferase;protein_id=WP_000989419.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 91098 92318 . - . ID=gene-AD11_RS11820;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AD11_RS11820;old_locus_tag=AD11_1783 NZ_JJLL01000125.1 Protein Homology CDS 91098 92318 . - 0 ID=cds-WP_000081986.1;Parent=gene-AD11_RS11820;Dbxref=GenBank:WP_000081986.1;Name=WP_000081986.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AD11_RS11820;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081986.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 92764 93570 . + . ID=gene-AD11_RS11825;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AD11_RS11825;old_locus_tag=AD11_1785 NZ_JJLL01000125.1 Protein Homology CDS 92764 93570 . + 0 ID=cds-WP_000673918.1;Parent=gene-AD11_RS11825;Dbxref=GenBank:WP_000673918.1;Name=WP_000673918.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AD11_RS11825;product=exodeoxyribonuclease III;protein_id=WP_000673918.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 93737 94447 . + . ID=gene-AD11_RS11830;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=AD11_RS11830;old_locus_tag=AD11_1786 NZ_JJLL01000125.1 Protein Homology CDS 93737 94447 . + 0 ID=cds-WP_001300395.1;Parent=gene-AD11_RS11830;Dbxref=GenBank:WP_001300395.1;Name=WP_001300395.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AD11_RS11830;product=TVP38/TMEM64 family protein;protein_id=WP_001300395.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 94452 95129 . + . ID=gene-AD11_RS11835;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AD11_RS11835;old_locus_tag=AD11_1787 NZ_JJLL01000125.1 Protein Homology CDS 94452 95129 . + 0 ID=cds-WP_000939212.1;Parent=gene-AD11_RS11835;Dbxref=GenBank:WP_000939212.1;Name=WP_000939212.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AD11_RS11835;product=lipoprotein YdjY;protein_id=WP_000939212.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 95144 95851 . + . ID=gene-AD11_RS11840;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=AD11_RS11840;old_locus_tag=AD11_1788 NZ_JJLL01000125.1 Protein Homology CDS 95144 95851 . + 0 ID=cds-WP_000980098.1;Parent=gene-AD11_RS11840;Dbxref=GenBank:WP_000980098.1;Name=WP_000980098.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjZ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416266.1;locus_tag=AD11_RS11840;product=TVP38/TMEM64 family protein;protein_id=WP_000980098.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 95851 96399 . + . ID=gene-AD11_RS11845;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=AD11_RS11845;old_locus_tag=AD11_1789 NZ_JJLL01000125.1 Protein Homology CDS 95851 96399 . + 0 ID=cds-WP_000524097.1;Parent=gene-AD11_RS11845;Dbxref=GenBank:WP_000524097.1;Name=WP_000524097.1;Ontology_term=GO:0051920;gbkey=CDS;gene=ynjA;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416267.1;locus_tag=AD11_RS11845;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524097.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 96409 97575 . + . ID=gene-AD11_RS11850;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=AD11_RS11850;old_locus_tag=AD11_1790 NZ_JJLL01000125.1 Protein Homology CDS 96409 97575 . + 0 ID=cds-WP_001215339.1;Parent=gene-AD11_RS11850;Dbxref=GenBank:WP_001215339.1;Name=WP_001215339.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AD11_RS11850;product=ABC transporter substrate-binding protein;protein_id=WP_001215339.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 97548 99083 . + . ID=gene-AD11_RS11855;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=AD11_RS11855;old_locus_tag=AD11_1791 NZ_JJLL01000125.1 Protein Homology CDS 97548 99083 . + 0 ID=cds-WP_033865484.1;Parent=gene-AD11_RS11855;Dbxref=GenBank:WP_033865484.1;Name=WP_033865484.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ynjC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416269.4;locus_tag=AD11_RS11855;product=ABC transporter permease subunit;protein_id=WP_033865484.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 99083 99736 . + . ID=gene-AD11_RS11860;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=AD11_RS11860;old_locus_tag=AD11_1792 NZ_JJLL01000125.1 Protein Homology CDS 99083 99736 . + 0 ID=cds-WP_033865485.1;Parent=gene-AD11_RS11860;Dbxref=GenBank:WP_033865485.1;Name=WP_033865485.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416270.1;locus_tag=AD11_RS11860;product=ATP-binding cassette domain-containing protein;protein_id=WP_033865485.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 99803 101110 . + . ID=gene-AD11_RS11865;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AD11_RS11865;old_locus_tag=AD11_1793 NZ_JJLL01000125.1 Protein Homology CDS 99803 101110 . + 0 ID=cds-WP_001301291.1;Parent=gene-AD11_RS11865;Dbxref=GenBank:WP_001301291.1;Name=WP_001301291.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AD11_RS11865;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001301291.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 101119 101739 . - . ID=gene-AD11_RS11870;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=AD11_RS11870;old_locus_tag=AD11_1794 NZ_JJLL01000125.1 Protein Homology CDS 101119 101739 . - 0 ID=cds-WP_001295484.1;Parent=gene-AD11_RS11870;Dbxref=GenBank:WP_001295484.1;Name=WP_001295484.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynjF;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416272.2;locus_tag=AD11_RS11870;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001295484.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 101826 102233 . + . ID=gene-AD11_RS11875;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AD11_RS11875;old_locus_tag=AD11_1795 NZ_JJLL01000125.1 Protein Homology CDS 101826 102233 . + 0 ID=cds-WP_000781888.1;Parent=gene-AD11_RS11875;Dbxref=GenBank:WP_000781888.1;Name=WP_000781888.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AD11_RS11875;product=CTP pyrophosphohydrolase;protein_id=WP_000781888.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 102199 102471 . - . ID=gene-AD11_RS11880;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=AD11_RS11880;old_locus_tag=AD11_1796 NZ_JJLL01000125.1 Protein Homology CDS 102199 102471 . - 0 ID=cds-WP_033865486.1;Parent=gene-AD11_RS11880;Dbxref=GenBank:WP_033865486.1;Name=WP_033865486.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AD11_RS11880;product=YnjH family protein;protein_id=WP_033865486.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 102707 104050 . + . ID=gene-AD11_RS11885;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AD11_RS11885;old_locus_tag=AD11_1797 NZ_JJLL01000125.1 Protein Homology CDS 102707 104050 . + 0 ID=cds-WP_033866408.1;Parent=gene-AD11_RS11885;Dbxref=GenBank:WP_033866408.1;Name=WP_033866408.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416275.1;locus_tag=AD11_RS11885;product=NADP-specific glutamate dehydrogenase;protein_id=WP_033866408.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 104167 105207 . - . ID=gene-AD11_RS11890;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=protein_coding;locus_tag=AD11_RS11890;old_locus_tag=AD11_1798 NZ_JJLL01000125.1 Protein Homology CDS 104167 105207 . - 0 ID=cds-WP_032083569.1;Parent=gene-AD11_RS11890;Dbxref=GenBank:WP_032083569.1;Name=WP_032083569.1;gbkey=CDS;gene=ynjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AD11_RS11890;product=DUF1266 domain-containing protein;protein_id=WP_032083569.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 105335 107296 . - . ID=gene-AD11_RS11895;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AD11_RS11895;old_locus_tag=AD11_1799 NZ_JJLL01000125.1 Protein Homology CDS 105335 107296 . - 0 ID=cds-WP_033865488.1;Parent=gene-AD11_RS11895;Dbxref=GenBank:WP_033865488.1;Name=WP_033865488.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416277.1;locus_tag=AD11_RS11895;product=DNA topoisomerase III;protein_id=WP_033865488.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 107301 108344 . - . ID=gene-AD11_RS11900;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AD11_RS11900;old_locus_tag=AD11_1800 NZ_JJLL01000125.1 Protein Homology CDS 107301 108344 . - 0 ID=cds-WP_001295485.1;Parent=gene-AD11_RS11900;Dbxref=GenBank:WP_001295485.1;Name=WP_001295485.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416278.1;locus_tag=AD11_RS11900;product=selenide%2C water dikinase SelD;protein_id=WP_001295485.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 108461 109012 . - . ID=gene-AD11_RS11910;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AD11_RS11910;old_locus_tag=AD11_1801 NZ_JJLL01000125.1 Protein Homology CDS 108461 109012 . - 0 ID=cds-WP_000339283.1;Parent=gene-AD11_RS11910;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AD11_RS11910;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 109173 111029 . + . ID=gene-AD11_RS11920;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AD11_RS11920;old_locus_tag=AD11_1802 NZ_JJLL01000125.1 Protein Homology CDS 109173 111029 . + 0 ID=cds-WP_033865489.1;Parent=gene-AD11_RS11920;Dbxref=GenBank:WP_033865489.1;Name=WP_033865489.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416280.1;locus_tag=AD11_RS11920;product=signal peptide peptidase SppA;protein_id=WP_033865489.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 111196 112212 . + . ID=gene-AD11_RS11925;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AD11_RS11925;old_locus_tag=AD11_1803 NZ_JJLL01000125.1 Protein Homology CDS 111196 112212 . + 0 ID=cds-WP_001170157.1;Parent=gene-AD11_RS11925;Dbxref=GenBank:WP_001170157.1;Name=WP_001170157.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AD11_RS11925;product=asparaginase;protein_id=WP_001170157.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 112223 112864 . + . ID=gene-AD11_RS11930;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AD11_RS11930;old_locus_tag=AD11_1804 NZ_JJLL01000125.1 Protein Homology CDS 112223 112864 . + 0 ID=cds-WP_001135066.1;Parent=gene-AD11_RS11930;Dbxref=GenBank:WP_001135066.1;Name=WP_001135066.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416282.4;locus_tag=AD11_RS11930;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001135066.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 112957 114315 . - . ID=gene-AD11_RS11935;Name=ydjE;gbkey=Gene;gene=ydjE;gene_biotype=protein_coding;locus_tag=AD11_RS11935;old_locus_tag=AD11_1805 NZ_JJLL01000125.1 Protein Homology CDS 112957 114315 . - 0 ID=cds-WP_033865490.1;Parent=gene-AD11_RS11935;Dbxref=GenBank:WP_033865490.1;Name=WP_033865490.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416283.1;locus_tag=AD11_RS11935;product=MFS transporter;protein_id=WP_033865490.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 114433 115191 . - . ID=gene-AD11_RS11940;Name=ydjF;gbkey=Gene;gene=ydjF;gene_biotype=protein_coding;locus_tag=AD11_RS11940;old_locus_tag=AD11_1806 NZ_JJLL01000125.1 Protein Homology CDS 114433 115191 . - 0 ID=cds-WP_000719088.1;Parent=gene-AD11_RS11940;Dbxref=GenBank:WP_000719088.1;Name=WP_000719088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ydjF;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=AD11_RS11940;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719088.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 115328 116308 . - . ID=gene-AD11_RS11945;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=AD11_RS11945;old_locus_tag=AD11_1807 NZ_JJLL01000125.1 Protein Homology CDS 115328 116308 . - 0 ID=cds-WP_000723723.1;Parent=gene-AD11_RS11945;Dbxref=GenBank:WP_000723723.1;Name=WP_000723723.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416285.1;locus_tag=AD11_RS11945;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000723723.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 116318 117265 . - . ID=gene-AD11_RS11950;Name=ydjH;gbkey=Gene;gene=ydjH;gene_biotype=protein_coding;locus_tag=AD11_RS11950;old_locus_tag=AD11_1808 NZ_JJLL01000125.1 Protein Homology CDS 116318 117265 . - 0 ID=cds-WP_001299568.1;Parent=gene-AD11_RS11950;Dbxref=GenBank:WP_001299568.1;Name=WP_001299568.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;gene=ydjH;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=AD11_RS11950;product=sugar kinase;protein_id=WP_001299568.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 117270 118106 . - . ID=gene-AD11_RS11955;Name=ydjI;gbkey=Gene;gene=ydjI;gene_biotype=protein_coding;locus_tag=AD11_RS11955;old_locus_tag=AD11_1809 NZ_JJLL01000125.1 Protein Homology CDS 117270 118106 . - 0 ID=cds-WP_001556648.1;Parent=gene-AD11_RS11955;Dbxref=GenBank:WP_001556648.1;Name=WP_001556648.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=ydjI;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=AD11_RS11955;product=ketose-bisphosphate aldolase;protein_id=WP_001556648.1;transl_table=11 NZ_JJLL01000125.1 RefSeq pseudogene 118127 119169 . - . ID=gene-AD11_RS11960;Name=ydjJ;gbkey=Gene;gene=ydjJ;gene_biotype=pseudogene;locus_tag=AD11_RS11960;pseudo=true NZ_JJLL01000125.1 Protein Homology CDS 118127 119169 . - 0 ID=cds-AD11_RS11960;Parent=gene-AD11_RS11960;Note=frameshifted;gbkey=CDS;gene=ydjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=AD11_RS11960;product=NAD(P)-dependent alcohol dehydrogenase;pseudo=true;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 119186 120565 . - . ID=gene-AD11_RS11965;Name=ydjK;gbkey=Gene;gene=ydjK;gene_biotype=protein_coding;locus_tag=AD11_RS11965;old_locus_tag=AD11_1811 NZ_JJLL01000125.1 Protein Homology CDS 119186 120565 . - 0 ID=cds-WP_001466200.1;Parent=gene-AD11_RS11965;Dbxref=GenBank:WP_001466200.1;Name=WP_001466200.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=AD11_RS11965;product=MFS transporter;protein_id=WP_001466200.1;transl_table=11 NZ_JJLL01000125.1 RefSeq pseudogene 120592 121668 . - . ID=gene-AD11_RS29150;Name=ydjL;gbkey=Gene;gene=ydjL;gene_biotype=pseudogene;locus_tag=AD11_RS29150;pseudo=true NZ_JJLL01000125.1 Protein Homology CDS 120592 121668 . - 0 ID=cds-AD11_RS29150;Parent=gene-AD11_RS29150;Note=internal stop;gbkey=CDS;gene=ydjL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416290.1;locus_tag=AD11_RS29150;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 122038 122310 . - . ID=gene-AD11_RS11980;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AD11_RS11980;old_locus_tag=AD11_1814 NZ_JJLL01000125.1 Protein Homology CDS 122038 122310 . - 0 ID=cds-WP_001300415.1;Parent=gene-AD11_RS11980;Dbxref=GenBank:WP_001300415.1;Name=WP_001300415.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416291.4;locus_tag=AD11_RS11980;product=YeaC family protein;protein_id=WP_001300415.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 122352 122765 . - . ID=gene-AD11_RS11985;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AD11_RS11985;old_locus_tag=AD11_1815 NZ_JJLL01000125.1 Protein Homology CDS 122352 122765 . - 0 ID=cds-WP_001284618.1;Parent=gene-AD11_RS11985;Dbxref=GenBank:WP_001284618.1;Name=WP_001284618.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=AD11_RS11985;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 123107 124102 . + . ID=gene-AD11_RS11990;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AD11_RS11990;old_locus_tag=AD11_1816 NZ_JJLL01000125.1 Protein Homology CDS 123107 124102 . + 0 ID=cds-WP_000153502.1;Parent=gene-AD11_RS11990;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AD11_RS11990;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 124186 125070 . + . ID=gene-AD11_RS11995;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AD11_RS11995;old_locus_tag=AD11_1817 NZ_JJLL01000125.1 Protein Homology CDS 124186 125070 . + 0 ID=cds-WP_001295488.1;Parent=gene-AD11_RS11995;Dbxref=GenBank:WP_001295488.1;Name=WP_001295488.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707334.2;locus_tag=AD11_RS11995;product=D-hexose-6-phosphate mutarotase;protein_id=WP_001295488.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 125118 125972 . - . ID=gene-AD11_RS12000;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AD11_RS12000;old_locus_tag=AD11_1818 NZ_JJLL01000125.1 Protein Homology CDS 125118 125972 . - 0 ID=cds-WP_001186374.1;Parent=gene-AD11_RS12000;Dbxref=GenBank:WP_001186374.1;Name=WP_001186374.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416295.1;locus_tag=AD11_RS12000;product=methylglyoxal reductase YeaE;protein_id=WP_001186374.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 126062 126808 . - . ID=gene-AD11_RS12005;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AD11_RS12005;old_locus_tag=AD11_1819 NZ_JJLL01000125.1 Protein Homology CDS 126062 126808 . - 0 ID=cds-WP_000163771.1;Parent=gene-AD11_RS12005;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AD11_RS12005;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 127244 129178 . + . ID=gene-AD11_RS12010;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AD11_RS12010;old_locus_tag=AD11_1820 NZ_JJLL01000125.1 Protein Homology CDS 127244 129178 . + 0 ID=cds-WP_001019882.1;Parent=gene-AD11_RS12010;Dbxref=GenBank:WP_001019882.1;Name=WP_001019882.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AD11_RS12010;product=protein kinase YeaG;protein_id=WP_001019882.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 129291 130574 . + . ID=gene-AD11_RS12015;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AD11_RS12015;old_locus_tag=AD11_1821 NZ_JJLL01000125.1 Protein Homology CDS 129291 130574 . + 0 ID=cds-WP_000219687.1;Parent=gene-AD11_RS12015;Dbxref=GenBank:WP_000219687.1;Name=WP_000219687.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416298.1;locus_tag=AD11_RS12015;product=YeaH/YhbH family protein;protein_id=WP_000219687.1;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 130721 132196 . + . ID=gene-AD11_RS12020;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=AD11_RS12020;old_locus_tag=AD11_1822 NZ_JJLL01000125.1 Protein Homology CDS 130721 132196 . + 0 ID=cds-WP_000616433.1;Parent=gene-AD11_RS12020;Dbxref=GenBank:WP_000616433.1;Name=WP_000616433.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;gene=cdgI;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AD11_RS12020;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000616433.1;transl_table=11 NZ_JJLL01000125.1 RefSeq pseudogene 132377 133270 . + . ID=gene-AD11_RS12025;Name=AD11_RS12025;end_range=133270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS12025;old_locus_tag=AD11_1823;partial=true;pseudo=true NZ_JJLL01000125.1 Protein Homology CDS 132377 133270 . + 0 ID=cds-AD11_RS12025;Parent=gene-AD11_RS12025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=133270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AD11_RS12025;partial=true;product=GAPES1 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000125.1 RefSeq gene 133327 134024 . + . ID=gene-AD11_RS12030;Name=AD11_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12030;old_locus_tag=AD11_1824 NZ_JJLL01000125.1 Protein Homology CDS 133327 133576 . + 0 ID=cds-WP_094096600.1-2;Parent=gene-AD11_RS12030;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS12030;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JJLL01000125.1 Protein Homology CDS 133576 134024 . + 2 ID=cds-WP_094096600.1-2;Parent=gene-AD11_RS12030;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS12030;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 ##sequence-region NZ_JJLL01000126.1 1 79887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000126.1 RefSeq region 1 79887 . + . ID=NZ_JJLL01000126.1:1..79887;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000126.1 RefSeq pseudogene 1 423 . + . ID=gene-AD11_RS12035;Name=AD11_RS12035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS12035;old_locus_tag=AD11_1825;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000126.1 Protein Homology CDS 1 423 . + 0 ID=cds-AD11_RS12035;Parent=gene-AD11_RS12035;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS12035;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000126.1 RefSeq pseudogene 434 1042 . + . ID=gene-AD11_RS12040;Name=AD11_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS12040;old_locus_tag=AD11_1826;partial=true;pseudo=true;start_range=.,434 NZ_JJLL01000126.1 Protein Homology CDS 434 1042 . + 0 ID=cds-AD11_RS12040;Parent=gene-AD11_RS12040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AD11_RS12040;partial=true;product=diguanylate cyclase domain-containing protein;pseudo=true;start_range=.,434;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 1085 1588 . + . ID=gene-AD11_RS12045;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AD11_RS12045;old_locus_tag=AD11_1827 NZ_JJLL01000126.1 Protein Homology CDS 1085 1588 . + 0 ID=cds-WP_000138043.1;Parent=gene-AD11_RS12045;Dbxref=GenBank:WP_000138043.1;Name=WP_000138043.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AD11_RS12045;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138043.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 1589 1693 . - . ID=gene-AD11_RS12050;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AD11_RS12050 NZ_JJLL01000126.1 Protein Homology CDS 1589 1693 . - 0 ID=cds-WP_000999630.1;Parent=gene-AD11_RS12050;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AD11_RS12050;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 1863 2309 . + . ID=gene-AD11_RS12055;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AD11_RS12055;old_locus_tag=AD11_1828 NZ_JJLL01000126.1 Protein Homology CDS 1863 2309 . + 0 ID=cds-WP_000460707.1;Parent=gene-AD11_RS12055;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AD11_RS12055;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 2266 3087 . - . ID=gene-AD11_RS12060;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=AD11_RS12060;old_locus_tag=AD11_1829 NZ_JJLL01000126.1 Protein Homology CDS 2266 3087 . - 0 ID=cds-WP_000972248.1;Parent=gene-AD11_RS12060;Dbxref=GenBank:WP_000972248.1;Name=WP_000972248.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AD11_RS12060;product=DNA-binding transcriptional regulator NimR;protein_id=WP_000972248.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 3184 4365 . + . ID=gene-AD11_RS12065;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AD11_RS12065;old_locus_tag=AD11_1830 NZ_JJLL01000126.1 Protein Homology CDS 3184 4365 . + 0 ID=cds-WP_000128491.1;Parent=gene-AD11_RS12065;Dbxref=GenBank:WP_000128491.1;Name=WP_000128491.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416305.1;locus_tag=AD11_RS12065;product=2-nitroimidazole transporter;protein_id=WP_000128491.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 4420 4767 . + . ID=gene-AD11_RS12070;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AD11_RS12070;old_locus_tag=AD11_1831 NZ_JJLL01000126.1 Protein Homology CDS 4420 4767 . + 0 ID=cds-WP_001326526.1;Parent=gene-AD11_RS12070;Dbxref=GenBank:WP_001326526.1;Name=WP_001326526.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AD11_RS12070;product=DUF488 domain-containing protein;protein_id=WP_001326526.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 4789 5043 . - . ID=gene-AD11_RS12075;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AD11_RS12075;old_locus_tag=AD11_1832 NZ_JJLL01000126.1 Protein Homology CDS 4789 5043 . - 0 ID=cds-WP_000691930.1;Parent=gene-AD11_RS12075;Dbxref=GenBank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AD11_RS12075;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 5226 6251 . + . ID=gene-AD11_RS12080;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AD11_RS12080;old_locus_tag=AD11_1833 NZ_JJLL01000126.1 Protein Homology CDS 5226 6251 . + 0 ID=cds-WP_001424275.1;Parent=gene-AD11_RS12080;Dbxref=GenBank:WP_001424275.1;Name=WP_001424275.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AD11_RS12080;product=diguanylate cyclase DgcP;protein_id=WP_001424275.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 6284 6382 . + . ID=gene-AD11_RS12085;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AD11_RS12085 NZ_JJLL01000126.1 Protein Homology CDS 6284 6382 . + 0 ID=cds-WP_033865496.1;Parent=gene-AD11_RS12085;Dbxref=GenBank:WP_033865496.1;Name=WP_033865496.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AD11_RS12085;product=YoaK family small membrane protein;protein_id=WP_033865496.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 6385 6459 . + . ID=gene-AD11_RS30715;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AD11_RS30715 NZ_JJLL01000126.1 Protein Homology CDS 6385 6459 . + 0 ID=cds-WP_001386836.1;Parent=gene-AD11_RS30715;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AD11_RS30715;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 6518 6766 . - . ID=gene-AD11_RS12090;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AD11_RS12090;old_locus_tag=AD11_1834 NZ_JJLL01000126.1 Protein Homology CDS 6518 6766 . - 0 ID=cds-WP_000512153.1;Parent=gene-AD11_RS12090;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AD11_RS12090;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 6914 7096 . - . ID=gene-AD11_RS12095;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AD11_RS12095;old_locus_tag=AD11_1835 NZ_JJLL01000126.1 Protein Homology CDS 6914 7096 . - 0 ID=cds-WP_000513737.1;Parent=gene-AD11_RS12095;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AD11_RS12095;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 7100 7459 . - . ID=gene-AD11_RS12100;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=AD11_RS12100;old_locus_tag=AD11_1836 NZ_JJLL01000126.1 Protein Homology CDS 7100 7459 . - 0 ID=cds-WP_000939312.1;Parent=gene-AD11_RS12100;Dbxref=GenBank:WP_000939312.1;Name=WP_000939312.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AD11_RS12100;product=DUF1971 domain-containing protein YeaR;protein_id=WP_000939312.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 7632 8270 . - . ID=gene-AD11_RS12105;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AD11_RS12105;old_locus_tag=AD11_1838 NZ_JJLL01000126.1 Protein Homology CDS 7632 8270 . - 0 ID=cds-WP_000457206.1;Parent=gene-AD11_RS12105;Dbxref=GenBank:WP_000457206.1;Name=WP_000457206.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AD11_RS12105;product=leucine efflux protein LeuE;protein_id=WP_000457206.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 8397 9320 . - . ID=gene-AD11_RS12110;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AD11_RS12110;old_locus_tag=AD11_1839 NZ_JJLL01000126.1 Protein Homology CDS 8397 9320 . - 0 ID=cds-WP_001300522.1;Parent=gene-AD11_RS12110;Dbxref=GenBank:WP_001300522.1;Name=WP_001300522.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AD11_RS12110;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001300522.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 9423 10508 . + . ID=gene-AD11_RS12115;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AD11_RS12115;old_locus_tag=AD11_1840 NZ_JJLL01000126.1 Protein Homology CDS 9423 10508 . + 0 ID=cds-WP_000978494.1;Parent=gene-AD11_RS12115;Dbxref=GenBank:WP_000978494.1;Name=WP_000978494.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AD11_RS12115;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_000978494.1;transl_table=11 NZ_JJLL01000126.1 RefSeq pseudogene 10663 12144 . + . ID=gene-AD11_RS12120;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=pseudogene;locus_tag=AD11_RS12120;old_locus_tag=AD11_1841;partial=true;pseudo=true;start_range=.,10663 NZ_JJLL01000126.1 Protein Homology CDS 10663 12144 . + 0 ID=cds-AD11_RS12120;Parent=gene-AD11_RS12120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AD11_RS12120;partial=true;product=BCCT family transporter YeaV;pseudo=true;start_range=.,10663;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 12176 13300 . + . ID=gene-AD11_RS12125;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AD11_RS12125;old_locus_tag=AD11_1842 NZ_JJLL01000126.1 Protein Homology CDS 12176 13300 . + 0 ID=cds-WP_033865497.1;Parent=gene-AD11_RS12125;Dbxref=GenBank:WP_033865497.1;Name=WP_033865497.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AD11_RS12125;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_033865497.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 13356 14321 . + . ID=gene-AD11_RS12130;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AD11_RS12130;old_locus_tag=AD11_1843 NZ_JJLL01000126.1 Protein Homology CDS 13356 14321 . + 0 ID=cds-WP_001287031.1;Parent=gene-AD11_RS12130;Dbxref=GenBank:WP_001287031.1;Name=WP_001287031.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AD11_RS12130;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_001287031.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 14375 15490 . - . ID=gene-AD11_RS12135;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AD11_RS12135;old_locus_tag=AD11_1844 NZ_JJLL01000126.1 Protein Homology CDS 14375 15490 . - 0 ID=cds-WP_001303529.1;Parent=gene-AD11_RS12135;Dbxref=GenBank:WP_001303529.1;Name=WP_001303529.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310540.2;locus_tag=AD11_RS12135;product=ribonuclease D;protein_id=WP_001303529.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 15572 17257 . - . ID=gene-AD11_RS12140;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AD11_RS12140;old_locus_tag=AD11_1845 NZ_JJLL01000126.1 Protein Homology CDS 15572 17257 . - 0 ID=cds-WP_077747090.1;Parent=gene-AD11_RS12140;Dbxref=GenBank:WP_077747090.1;Name=WP_077747090.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AD11_RS12140;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_077747090.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 17462 18043 . - . ID=gene-AD11_RS12145;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AD11_RS12145;old_locus_tag=AD11_1846 NZ_JJLL01000126.1 Protein Homology CDS 17462 18043 . - 0 ID=cds-WP_000290576.1;Parent=gene-AD11_RS12145;Dbxref=GenBank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AD11_RS12145;product=Slp family lipoprotein YeaY;protein_id=WP_000290576.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 18083 18778 . - . ID=gene-AD11_RS12150;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AD11_RS12150;old_locus_tag=AD11_1847 NZ_JJLL01000126.1 Protein Homology CDS 18083 18778 . - 0 ID=cds-WP_001220966.1;Parent=gene-AD11_RS12150;Dbxref=GenBank:WP_001220966.1;Name=WP_001220966.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416321.1;locus_tag=AD11_RS12150;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220966.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 18836 20746 . - . ID=gene-AD11_RS12155;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AD11_RS12155;old_locus_tag=AD11_1848 NZ_JJLL01000126.1 Protein Homology CDS 18836 20746 . - 0 ID=cds-WP_033865499.1;Parent=gene-AD11_RS12155;Dbxref=GenBank:WP_033865499.1;Name=WP_033865499.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AD11_RS12155;product=ATP-dependent DNA helicase;protein_id=WP_033865499.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 20878 21222 . + . ID=gene-AD11_RS12160;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AD11_RS12160;old_locus_tag=AD11_1849 NZ_JJLL01000126.1 Protein Homology CDS 20878 21222 . + 0 ID=cds-WP_001295493.1;Parent=gene-AD11_RS12160;Dbxref=GenBank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AD11_RS12160;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 21644 21943 . + . ID=gene-AD11_RS12170;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=protein_coding;locus_tag=AD11_RS12170;old_locus_tag=AD11_1850 NZ_JJLL01000126.1 Protein Homology CDS 21644 21943 . + 0 ID=cds-WP_001111993.1;Parent=gene-AD11_RS12170;Dbxref=GenBank:WP_001111993.1;Name=WP_001111993.1;gbkey=CDS;gene=yoaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AD11_RS12170;product=DUF1889 family protein;protein_id=WP_001111993.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 22063 22242 . - . ID=gene-AD11_RS12175;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AD11_RS12175;old_locus_tag=AD11_1851 NZ_JJLL01000126.1 Protein Homology CDS 22063 22242 . - 0 ID=cds-WP_000457334.1;Parent=gene-AD11_RS12175;Dbxref=GenBank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AD11_RS12175;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 22316 23677 . + . ID=gene-AD11_RS12180;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AD11_RS12180;old_locus_tag=AD11_1852 NZ_JJLL01000126.1 Protein Homology CDS 22316 23677 . + 0 ID=cds-WP_000854972.1;Parent=gene-AD11_RS12180;Dbxref=GenBank:WP_000854972.1;Name=WP_000854972.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707310.1;locus_tag=AD11_RS12180;product=aminodeoxychorismate synthase component 1;protein_id=WP_000854972.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 23681 24259 . + . ID=gene-AD11_RS12185;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AD11_RS12185;old_locus_tag=AD11_1853 NZ_JJLL01000126.1 Protein Homology CDS 23681 24259 . + 0 ID=cds-WP_000456714.1;Parent=gene-AD11_RS12185;Dbxref=GenBank:WP_000456714.1;Name=WP_000456714.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416327.1;locus_tag=AD11_RS12185;product=CoA pyrophosphatase;protein_id=WP_000456714.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 24443 25807 . + . ID=gene-AD11_RS12190;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AD11_RS12190;old_locus_tag=AD11_1854 NZ_JJLL01000126.1 Protein Homology CDS 24443 25807 . + 0 ID=cds-WP_000624298.1;Parent=gene-AD11_RS12190;Dbxref=GenBank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AD11_RS12190;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 25938 27536 . + . ID=gene-AD11_RS12195;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=AD11_RS12195;old_locus_tag=AD11_1855 NZ_JJLL01000126.1 Protein Homology CDS 25938 27536 . + 0 ID=cds-WP_001295494.1;Parent=gene-AD11_RS12195;Dbxref=GenBank:WP_001295494.1;Name=WP_001295494.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416329.4;locus_tag=AD11_RS12195;product=EAL domain-containing protein;protein_id=WP_001295494.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 27540 29096 . - . ID=gene-AD11_RS12200;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AD11_RS12200;old_locus_tag=AD11_1856 NZ_JJLL01000126.1 Protein Homology CDS 27540 29096 . - 0 ID=cds-WP_000394983.1;Parent=gene-AD11_RS12200;Dbxref=GenBank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AD11_RS12200;product=CNNM family cation transport protein YoaE;protein_id=WP_000394983.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 29084 29242 . - . ID=gene-AD11_RS32885;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AD11_RS32885 NZ_JJLL01000126.1 Protein Homology CDS 29084 29242 . - 0 ID=cds-WP_001327808.1;Parent=gene-AD11_RS32885;Dbxref=GenBank:WP_001327808.1;Name=WP_001327808.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AD11_RS32885;product=protein YoaL;protein_id=WP_001327808.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 29559 30530 . + . ID=gene-AD11_RS12210;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AD11_RS12210;old_locus_tag=AD11_1857 NZ_JJLL01000126.1 Protein Homology CDS 29559 30530 . + 0 ID=cds-WP_000150543.1;Parent=gene-AD11_RS12210;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AD11_RS12210;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 30593 31393 . + . ID=gene-AD11_RS12215;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AD11_RS12215;old_locus_tag=AD11_1858 NZ_JJLL01000126.1 Protein Homology CDS 30593 31393 . + 0 ID=cds-WP_000406926.1;Parent=gene-AD11_RS12215;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AD11_RS12215;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 31406 32257 . + . ID=gene-AD11_RS12220;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AD11_RS12220;old_locus_tag=AD11_1859 NZ_JJLL01000126.1 Protein Homology CDS 31406 32257 . + 0 ID=cds-WP_000228655.1;Parent=gene-AD11_RS12220;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AD11_RS12220;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 32312 32770 . + . ID=gene-AD11_RS12225;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AD11_RS12225;old_locus_tag=AD11_1860 NZ_JJLL01000126.1 Protein Homology CDS 32312 32770 . + 0 ID=cds-WP_032083590.1;Parent=gene-AD11_RS12225;Dbxref=GenBank:WP_032083590.1;Name=WP_032083590.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AD11_RS12225;product=DUF986 family protein;protein_id=WP_032083590.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 33199 33765 . + . ID=gene-AD11_RS12235;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AD11_RS12235;old_locus_tag=AD11_1861 NZ_JJLL01000126.1 Protein Homology CDS 33199 33765 . + 0 ID=cds-WP_001296134.1;Parent=gene-AD11_RS12235;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AD11_RS12235;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 33762 34571 . - . ID=gene-AD11_RS12240;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AD11_RS12240;old_locus_tag=AD11_1862 NZ_JJLL01000126.1 Protein Homology CDS 33762 34571 . - 0 ID=cds-WP_000010120.1;Parent=gene-AD11_RS12240;Dbxref=GenBank:WP_000010120.1;Name=WP_000010120.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AD11_RS12240;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_000010120.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 34737 34946 . - . ID=gene-AD11_RS12245;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD11_RS12245;old_locus_tag=AD11_1863 NZ_JJLL01000126.1 Protein Homology CDS 34737 34946 . - 0 ID=cds-WP_001062678.1;Parent=gene-AD11_RS12245;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AD11_RS12245;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 34959 35102 . - . ID=gene-AD11_RS12250;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=AD11_RS12250;old_locus_tag=AD11_1864 NZ_JJLL01000126.1 Protein Homology CDS 34959 35102 . - 0 ID=cds-WP_001295496.1;Parent=gene-AD11_RS12250;Dbxref=GenBank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AD11_RS12250;product=DUF2627 domain-containing protein;protein_id=WP_001295496.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 35772 36059 . - . ID=gene-AD11_RS12260;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AD11_RS12260;old_locus_tag=AD11_1865 NZ_JJLL01000126.1 Protein Homology CDS 35772 36059 . - 0 ID=cds-WP_001006862.1;Parent=gene-AD11_RS12260;Dbxref=GenBank:WP_001006862.1;Name=WP_001006862.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310562.1;locus_tag=AD11_RS12260;product=YebO family protein;protein_id=WP_001006862.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 36134 36277 . - . ID=gene-AD11_RS12265;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AD11_RS12265;old_locus_tag=AD11_1866 NZ_JJLL01000126.1 Protein Homology CDS 36134 36277 . - 0 ID=cds-WP_000714550.1;Parent=gene-AD11_RS12265;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AD11_RS12265;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 36436 36675 . + . ID=gene-AD11_RS12270;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AD11_RS12270;old_locus_tag=AD11_1867 NZ_JJLL01000126.1 Protein Homology CDS 36436 36675 . + 0 ID=cds-WP_001619528.1;Parent=gene-AD11_RS12270;Dbxref=GenBank:WP_001619528.1;Name=WP_001619528.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619528.1;locus_tag=AD11_RS12270;product=YobH family protein;protein_id=WP_001619528.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 36818 37609 . - . ID=gene-AD11_RS12275;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AD11_RS12275;old_locus_tag=AD11_1868 NZ_JJLL01000126.1 Protein Homology CDS 36818 37609 . - 0 ID=cds-WP_001262182.1;Parent=gene-AD11_RS12275;Dbxref=GenBank:WP_001262182.1;Name=WP_001262182.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=AD11_RS12275;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262182.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 37786 39159 . + . ID=gene-AD11_RS12280;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AD11_RS12280;old_locus_tag=AD11_1869 NZ_JJLL01000126.1 Protein Homology CDS 37786 39159 . + 0 ID=cds-WP_001127216.1;Parent=gene-AD11_RS12280;Dbxref=GenBank:WP_001127216.1;Name=WP_001127216.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AD11_RS12280;product=MFS transporter;protein_id=WP_001127216.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 39205 40086 . - . ID=gene-AD11_RS12285;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AD11_RS12285;old_locus_tag=AD11_1870 NZ_JJLL01000126.1 Protein Homology CDS 39205 40086 . - 0 ID=cds-WP_000984517.1;Parent=gene-AD11_RS12285;Dbxref=GenBank:WP_000984517.1;Name=WP_000984517.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AD11_RS12285;product=protease HtpX;protein_id=WP_000984517.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 40278 42326 . - . ID=gene-AD11_RS12290;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AD11_RS12290;old_locus_tag=AD11_1871 NZ_JJLL01000126.1 Protein Homology CDS 40278 42326 . - 0 ID=cds-WP_001315679.1;Parent=gene-AD11_RS12290;Dbxref=GenBank:WP_001315679.1;Name=WP_001315679.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=AD11_RS12290;product=carboxy terminal-processing peptidase;protein_id=WP_001315679.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 42346 43044 . - . ID=gene-AD11_RS12295;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AD11_RS12295;old_locus_tag=AD11_1872 NZ_JJLL01000126.1 Protein Homology CDS 42346 43044 . - 0 ID=cds-WP_000431381.1;Parent=gene-AD11_RS12295;Dbxref=GenBank:WP_000431381.1;Name=WP_000431381.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026161.1;locus_tag=AD11_RS12295;product=RNA chaperone ProQ;protein_id=WP_000431381.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 43141 43638 . - . ID=gene-AD11_RS12300;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AD11_RS12300;old_locus_tag=AD11_1873 NZ_JJLL01000126.1 Protein Homology CDS 43141 43638 . - 0 ID=cds-WP_001043877.1;Parent=gene-AD11_RS12300;Dbxref=GenBank:WP_001043877.1;Name=WP_001043877.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416346.4;locus_tag=AD11_RS12300;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043877.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 43768 45051 . + . ID=gene-AD11_RS12305;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AD11_RS12305;old_locus_tag=AD11_1874 NZ_JJLL01000126.1 Protein Homology CDS 43768 45051 . + 0 ID=cds-WP_001207282.1;Parent=gene-AD11_RS12305;Dbxref=GenBank:WP_001207282.1;Name=WP_001207282.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AD11_RS12305;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207282.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 45020 47653 . + . ID=gene-AD11_RS12310;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AD11_RS12310;old_locus_tag=AD11_1875 NZ_JJLL01000126.1 Protein Homology CDS 45020 47653 . + 0 ID=cds-WP_001400471.1;Parent=gene-AD11_RS12310;Dbxref=GenBank:WP_001400471.1;Name=WP_001400471.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AD11_RS12310;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001400471.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 47733 49172 . + . ID=gene-AD11_RS12315;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AD11_RS12315;old_locus_tag=AD11_1876 NZ_JJLL01000126.1 Protein Homology CDS 47733 49172 . + 0 ID=cds-WP_024176540.1;Parent=gene-AD11_RS12315;Dbxref=GenBank:WP_024176540.1;Name=WP_024176540.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AD11_RS12315;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_024176540.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 49290 49526 . + . ID=gene-AD11_RS12320;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AD11_RS12320;old_locus_tag=AD11_1877 NZ_JJLL01000126.1 Protein Homology CDS 49290 49526 . + 0 ID=cds-WP_001295499.1;Parent=gene-AD11_RS12320;Dbxref=GenBank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AD11_RS12320;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 49631 49822 . + . ID=gene-AD11_RS12325;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AD11_RS12325;old_locus_tag=AD11_1878 NZ_JJLL01000126.1 Protein Homology CDS 49631 49822 . + 0 ID=cds-WP_001296140.1;Parent=gene-AD11_RS12325;Dbxref=GenBank:WP_001296140.1;Name=WP_001296140.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AD11_RS12325;product=YebW family protein;protein_id=WP_001296140.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 49823 50479 . - . ID=gene-AD11_RS12330;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AD11_RS12330;old_locus_tag=AD11_1879 NZ_JJLL01000126.1 Protein Homology CDS 49823 50479 . - 0 ID=cds-WP_000812720.1;Parent=gene-AD11_RS12330;Dbxref=GenBank:WP_000812720.1;Name=WP_000812720.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416352.4;locus_tag=AD11_RS12330;product=protein-serine/threonine phosphatase;protein_id=WP_000812720.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 50875 51216 . - . ID=gene-AD11_RS12340;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AD11_RS12340;old_locus_tag=AD11_1880 NZ_JJLL01000126.1 Protein Homology CDS 50875 51216 . - 0 ID=cds-WP_000976476.1;Parent=gene-AD11_RS12340;Dbxref=GenBank:WP_000976476.1;Name=WP_000976476.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416353.1;locus_tag=AD11_RS12340;product=YebY family protein;protein_id=WP_000976476.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 51229 52101 . - . ID=gene-AD11_RS12345;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AD11_RS12345;old_locus_tag=AD11_1881 NZ_JJLL01000126.1 Protein Homology CDS 51229 52101 . - 0 ID=cds-WP_000879295.1;Parent=gene-AD11_RS12345;Dbxref=GenBank:WP_000879295.1;Name=WP_000879295.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=AD11_RS12345;product=copper homeostasis membrane protein CopD;protein_id=WP_000879295.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 52105 52479 . - . ID=gene-AD11_RS12350;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AD11_RS12350;old_locus_tag=AD11_1882 NZ_JJLL01000126.1 Protein Homology CDS 52105 52479 . - 0 ID=cds-WP_000168747.1;Parent=gene-AD11_RS12350;Dbxref=GenBank:WP_000168747.1;Name=WP_000168747.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AD11_RS12350;product=CopC domain-containing protein YobA;protein_id=WP_000168747.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 52618 52848 . + . ID=gene-AD11_RS12355;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AD11_RS12355;old_locus_tag=AD11_1883 NZ_JJLL01000126.1 Protein Homology CDS 52618 52848 . + 0 ID=cds-WP_000916763.1;Parent=gene-AD11_RS12355;Dbxref=GenBank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AD11_RS12355;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 52950 53606 . + . ID=gene-AD11_RS12360;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AD11_RS12360;old_locus_tag=AD11_1884 NZ_JJLL01000126.1 Protein Homology CDS 52950 53606 . + 0 ID=cds-WP_000011657.1;Parent=gene-AD11_RS12360;Dbxref=GenBank:WP_000011657.1;Name=WP_000011657.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=AD11_RS12360;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011657.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 53630 54292 . + . ID=gene-AD11_RS12365;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AD11_RS12365;old_locus_tag=AD11_1885 NZ_JJLL01000126.1 Protein Homology CDS 53630 54292 . + 0 ID=cds-WP_000944256.1;Parent=gene-AD11_RS12365;Dbxref=GenBank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AD11_RS12365;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 54289 56349 . - . ID=gene-AD11_RS12370;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AD11_RS12370;old_locus_tag=AD11_1886 NZ_JJLL01000126.1 Protein Homology CDS 54289 56349 . - 0 ID=cds-WP_000936951.1;Parent=gene-AD11_RS12370;Dbxref=GenBank:WP_000936951.1;Name=WP_000936951.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=AD11_RS12370;product=oligopeptidase B;protein_id=WP_000936951.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 56558 57217 . - . ID=gene-AD11_RS12375;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AD11_RS12375;old_locus_tag=AD11_1887 NZ_JJLL01000126.1 Protein Homology CDS 56558 57217 . - 0 ID=cds-WP_000024745.1;Parent=gene-AD11_RS12375;Dbxref=GenBank:WP_000024745.1;Name=WP_000024745.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=AD11_RS12375;product=tellurite resistance TerB family protein;protein_id=WP_000024745.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 57544 57900 . - . ID=gene-AD11_RS12385;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AD11_RS12385;old_locus_tag=AD11_1888 NZ_JJLL01000126.1 Protein Homology CDS 57544 57900 . - 0 ID=cds-WP_001295500.1;Parent=gene-AD11_RS12385;Dbxref=GenBank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AD11_RS12385;product=protein YebF;protein_id=WP_001295500.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 57967 58257 . - . ID=gene-AD11_RS12390;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AD11_RS12390;old_locus_tag=AD11_1889 NZ_JJLL01000126.1 Protein Homology CDS 57967 58257 . - 0 ID=cds-WP_000257738.1;Parent=gene-AD11_RS12390;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AD11_RS12390;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 58391 59569 . + . ID=gene-AD11_RS12395;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AD11_RS12395;old_locus_tag=AD11_1890 NZ_JJLL01000126.1 Protein Homology CDS 58391 59569 . + 0 ID=cds-WP_000173509.1;Parent=gene-AD11_RS12395;Dbxref=GenBank:WP_000173509.1;Name=WP_000173509.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310586.1;locus_tag=AD11_RS12395;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_000173509.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 59625 60266 . - . ID=gene-AD11_RS12400;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AD11_RS12400;old_locus_tag=AD11_1891 NZ_JJLL01000126.1 Protein Homology CDS 59625 60266 . - 0 ID=cds-WP_000800512.1;Parent=gene-AD11_RS12400;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AD11_RS12400;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 60303 62114 . - . ID=gene-AD11_RS12405;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AD11_RS12405;old_locus_tag=AD11_1892 NZ_JJLL01000126.1 Protein Homology CDS 60303 62114 . - 0 ID=cds-WP_001069486.1;Parent=gene-AD11_RS12405;Dbxref=GenBank:WP_001069486.1;Name=WP_001069486.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AD11_RS12405;product=phosphogluconate dehydratase;protein_id=WP_001069486.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 62349 63824 . - . ID=gene-AD11_RS12410;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AD11_RS12410;old_locus_tag=AD11_1893 NZ_JJLL01000126.1 Protein Homology CDS 62349 63824 . - 0 ID=cds-WP_000301727.1;Parent=gene-AD11_RS12410;Dbxref=GenBank:WP_000301727.1;Name=WP_000301727.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AD11_RS12410;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 64162 65031 . + . ID=gene-AD11_RS12420;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AD11_RS12420;old_locus_tag=AD11_1895 NZ_JJLL01000126.1 Protein Homology CDS 64162 65031 . + 0 ID=cds-WP_021823808.1;Parent=gene-AD11_RS12420;Dbxref=GenBank:WP_021823808.1;Name=WP_021823808.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416367.1;locus_tag=AD11_RS12420;product=DNA-binding transcriptional regulator HexR;protein_id=WP_021823808.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 65159 66601 . + . ID=gene-AD11_RS12425;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AD11_RS12425;old_locus_tag=AD11_1896 NZ_JJLL01000126.1 Protein Homology CDS 65159 66601 . + 0 ID=cds-WP_000091148.1;Parent=gene-AD11_RS12425;Dbxref=GenBank:WP_000091148.1;Name=WP_000091148.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AD11_RS12425;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 66732 67703 . - . ID=gene-AD11_RS12430;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AD11_RS12430;old_locus_tag=AD11_1897 NZ_JJLL01000126.1 Protein Homology CDS 66732 67703 . - 0 ID=cds-WP_000448381.1;Parent=gene-AD11_RS12430;Dbxref=GenBank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AD11_RS12430;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 67823 69145 . - . ID=gene-AD11_RS12435;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AD11_RS12435;old_locus_tag=AD11_1898 NZ_JJLL01000126.1 Protein Homology CDS 67823 69145 . - 0 ID=cds-WP_001184045.1;Parent=gene-AD11_RS12435;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AD11_RS12435;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 69161 70093 . - . ID=gene-AD11_RS12440;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AD11_RS12440;old_locus_tag=AD11_1899 NZ_JJLL01000126.1 Protein Homology CDS 69161 70093 . - 0 ID=cds-WP_001300644.1;Parent=gene-AD11_RS12440;Dbxref=GenBank:WP_001300644.1;Name=WP_001300644.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AD11_RS12440;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_001300644.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 70172 70927 . + . ID=gene-AD11_RS12445;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AD11_RS12445;old_locus_tag=AD11_1900 NZ_JJLL01000126.1 Protein Homology CDS 70172 70927 . + 0 ID=cds-WP_000202990.1;Parent=gene-AD11_RS12445;Dbxref=GenBank:WP_000202990.1;Name=WP_000202990.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AD11_RS12445;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202990.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 70924 71709 . + . ID=gene-AD11_RS12450;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AD11_RS12450;old_locus_tag=AD11_1901 NZ_JJLL01000126.1 Protein Homology CDS 70924 71709 . + 0 ID=cds-WP_000571480.1;Parent=gene-AD11_RS12450;Dbxref=GenBank:WP_000571480.1;Name=WP_000571480.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416373.1;locus_tag=AD11_RS12450;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571480.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 72050 73060 . - . ID=gene-AD11_RS12455;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AD11_RS12455;old_locus_tag=AD11_1902 NZ_JJLL01000126.1 Protein Homology CDS 72050 73060 . - 0 ID=cds-WP_000568519.1;Parent=gene-AD11_RS12455;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AD11_RS12455;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 73069 73680 . - . ID=gene-AD11_RS12460;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AD11_RS12460;old_locus_tag=AD11_1903 NZ_JJLL01000126.1 Protein Homology CDS 73069 73680 . - 0 ID=cds-WP_000580323.1;Parent=gene-AD11_RS12460;Dbxref=GenBank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AD11_RS12460;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 73819 73884 . - . ID=gene-AD11_RS30725;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AD11_RS30725 NZ_JJLL01000126.1 Protein Homology CDS 73819 73884 . - 0 ID=cds-WP_072094247.1;Parent=gene-AD11_RS30725;Dbxref=GenBank:WP_072094247.1;Name=WP_072094247.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AD11_RS30725;product=stress response small protein YobI;protein_id=WP_072094247.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 73955 74557 . + . ID=gene-AD11_RS12465;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=AD11_RS12465;old_locus_tag=AD11_1904 NZ_JJLL01000126.1 Protein Homology CDS 73955 74557 . + 0 ID=cds-WP_033865500.1;Parent=gene-AD11_RS12465;Dbxref=GenBank:WP_033865500.1;Name=WP_033865500.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AD11_RS12465;product=YebB family permuted papain-like enzyme;protein_id=WP_033865500.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 74559 75080 . - . ID=gene-AD11_RS12470;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AD11_RS12470;old_locus_tag=AD11_1905 NZ_JJLL01000126.1 Protein Homology CDS 74559 75080 . - 0 ID=cds-WP_001295503.1;Parent=gene-AD11_RS12470;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AD11_RS12470;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 75115 75855 . - . ID=gene-AD11_RS12475;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AD11_RS12475;old_locus_tag=AD11_1906 NZ_JJLL01000126.1 Protein Homology CDS 75115 75855 . - 0 ID=cds-WP_000907248.1;Parent=gene-AD11_RS12475;Dbxref=GenBank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AD11_RS12475;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 75884 76336 . - . ID=gene-AD11_RS12480;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AD11_RS12480;old_locus_tag=AD11_1907 NZ_JJLL01000126.1 Protein Homology CDS 75884 76336 . - 0 ID=cds-WP_001300367.1;Parent=gene-AD11_RS12480;Dbxref=GenBank:WP_001300367.1;Name=WP_001300367.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AD11_RS12480;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001300367.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 76454 78226 . - . ID=gene-AD11_RS12485;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AD11_RS12485;old_locus_tag=AD11_1908 NZ_JJLL01000126.1 Protein Homology CDS 76454 78226 . - 0 ID=cds-WP_001258677.1;Parent=gene-AD11_RS12485;Dbxref=GenBank:WP_001258677.1;Name=WP_001258677.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AD11_RS12485;product=aspartate--tRNA ligase;protein_id=WP_001258677.1;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 78536 79102 . + . ID=gene-AD11_RS12490;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AD11_RS12490;old_locus_tag=AD11_1909 NZ_JJLL01000126.1 Protein Homology CDS 78536 79102 . + 0 ID=cds-WP_000891620.1;Parent=gene-AD11_RS12490;Dbxref=GenBank:WP_000891620.1;Name=WP_000891620.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AD11_RS12490;product=hydrolase;protein_id=WP_000891620.1;transl_table=11 NZ_JJLL01000126.1 RefSeq pseudogene 79099 79194 . + . ID=gene-AD11_RS32555;Name=AD11_RS32555;end_range=79194,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32555;partial=true;pseudo=true NZ_JJLL01000126.1 Protein Homology CDS 79099 79194 . + 0 ID=cds-AD11_RS32555;Parent=gene-AD11_RS32555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=79194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310605.1;locus_tag=AD11_RS32555;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000126.1 RefSeq gene 79457 79705 . + . ID=gene-AD11_RS12500;Name=AD11_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12500;old_locus_tag=AD11_1910 NZ_JJLL01000126.1 Protein Homology CDS 79457 79705 . + 0 ID=cds-WP_016232182.1;Parent=gene-AD11_RS12500;Dbxref=GenBank:WP_016232182.1;Name=WP_016232182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238123.1;locus_tag=AD11_RS12500;product=DinI-like family protein;protein_id=WP_016232182.1;transl_table=11 ##sequence-region NZ_JJLL01000127.1 1 67588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000127.1 RefSeq region 1 67588 . + . ID=NZ_JJLL01000127.1:1..67588;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000127.1 RefSeq gene 1 401 . - . ID=gene-AD11_RS12505;Name=AD11_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12505;old_locus_tag=AD11_1912;partial=true;start_range=.,1 NZ_JJLL01000127.1 Protein Homology CDS 1 401 . - 0 ID=cds-WP_033865517.1;Parent=gene-AD11_RS12505;Dbxref=GenBank:WP_033865517.1;Name=WP_033865517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309986.1;locus_tag=AD11_RS12505;partial=true;product=tellurite resistance TerB family protein;protein_id=WP_033865517.1;start_range=.,1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 572 648 . - . ID=gene-AD11_RS12510;Name=AD11_RS12510;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS12510;old_locus_tag=AD11_1913 NZ_JJLL01000127.1 tRNAscan-SE tRNA 572 648 . - . ID=rna-AD11_RS12510;Parent=gene-AD11_RS12510;anticodon=(pos:complement(612..614));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12510;product=tRNA-Arg NZ_JJLL01000127.1 tRNAscan-SE exon 572 648 . - . ID=exon-AD11_RS12510-1;Parent=rna-AD11_RS12510;anticodon=(pos:complement(612..614));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12510;product=tRNA-Arg NZ_JJLL01000127.1 RefSeq gene 663 739 . - . ID=gene-AD11_RS12515;Name=AD11_RS12515;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS12515;old_locus_tag=AD11_1914 NZ_JJLL01000127.1 tRNAscan-SE tRNA 663 739 . - . ID=rna-AD11_RS12515;Parent=gene-AD11_RS12515;anticodon=(pos:complement(703..705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12515;product=tRNA-Arg NZ_JJLL01000127.1 tRNAscan-SE exon 663 739 . - . ID=exon-AD11_RS12515-1;Parent=rna-AD11_RS12515;anticodon=(pos:complement(703..705));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12515;product=tRNA-Arg NZ_JJLL01000127.1 RefSeq gene 747 822 . - . ID=gene-AD11_RS12520;Name=AD11_RS12520;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS12520;old_locus_tag=AD11_1915 NZ_JJLL01000127.1 tRNAscan-SE tRNA 747 822 . - . ID=rna-AD11_RS12520;Parent=gene-AD11_RS12520;anticodon=(pos:complement(787..789));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12520;product=tRNA-Ile NZ_JJLL01000127.1 tRNAscan-SE exon 747 822 . - . ID=exon-AD11_RS12520-1;Parent=rna-AD11_RS12520;anticodon=(pos:complement(787..789));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12520;product=tRNA-Ile NZ_JJLL01000127.1 RefSeq pseudogene 872 1159 . - . ID=gene-AD11_RS29190;Name=AD11_RS29190;end_range=1159,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29190;old_locus_tag=AD11_1916;partial=true;pseudo=true NZ_JJLL01000127.1 Protein Homology CDS 872 1159 . - 0 ID=cds-AD11_RS29190;Parent=gene-AD11_RS29190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009307,GO:0003677,GO:0008170;end_range=1159,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AD11_RS29190;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 1283 1678 . - . ID=gene-AD11_RS12530;Name=AD11_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12530;old_locus_tag=AD11_1917 NZ_JJLL01000127.1 Protein Homology CDS 1283 1678 . - 0 ID=cds-WP_085960473.1;Parent=gene-AD11_RS12530;Dbxref=GenBank:WP_085960473.1;Name=WP_085960473.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204805.1;locus_tag=AD11_RS12530;product=antiterminator Q family protein;protein_id=WP_085960473.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 1693 2682 . - . ID=gene-AD11_RS12535;Name=AD11_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12535;old_locus_tag=AD11_1918 NZ_JJLL01000127.1 Protein Homology CDS 1693 2682 . - 0 ID=cds-WP_033865521.1;Parent=gene-AD11_RS12535;Dbxref=GenBank:WP_033865521.1;Name=WP_033865521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764249.1;locus_tag=AD11_RS12535;product=DUF968 domain-containing protein;protein_id=WP_033865521.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 2690 3505 . - . ID=gene-AD11_RS12540;Name=AD11_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12540;old_locus_tag=AD11_1919 NZ_JJLL01000127.1 Protein Homology CDS 2690 3505 . - 0 ID=cds-WP_001072669.1;Parent=gene-AD11_RS12540;Dbxref=GenBank:WP_001072669.1;Name=WP_001072669.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001061373.1;locus_tag=AD11_RS12540;product=KilA-N domain-containing protein;protein_id=WP_001072669.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 3668 4063 . - . ID=gene-AD11_RS12545;Name=AD11_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12545;old_locus_tag=AD11_1920 NZ_JJLL01000127.1 Protein Homology CDS 3668 4063 . - 0 ID=cds-WP_000767110.1;Parent=gene-AD11_RS12545;Dbxref=GenBank:WP_000767110.1;Name=WP_000767110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767123.1;locus_tag=AD11_RS12545;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000767110.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 4060 4386 . - . ID=gene-AD11_RS12550;Name=AD11_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12550;old_locus_tag=AD11_1921 NZ_JJLL01000127.1 Protein Homology CDS 4060 4386 . - 0 ID=cds-WP_033865523.1;Parent=gene-AD11_RS12550;Dbxref=GenBank:WP_033865523.1;Name=WP_033865523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003878599.1;locus_tag=AD11_RS12550;product=LexA family transcriptional regulator;protein_id=WP_033865523.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 4383 5036 . - . ID=gene-AD11_RS12555;Name=AD11_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12555;old_locus_tag=AD11_1922 NZ_JJLL01000127.1 Protein Homology CDS 4383 5036 . - 0 ID=cds-WP_000066917.1;Parent=gene-AD11_RS12555;Dbxref=GenBank:WP_000066917.1;Name=WP_000066917.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378271.1;locus_tag=AD11_RS12555;product=phage N-6-adenine-methyltransferase;protein_id=WP_000066917.1;transl_table=11 NZ_JJLL01000127.1 RefSeq pseudogene 5051 5134 . - . ID=gene-AD11_RS32560;Name=AD11_RS32560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32560;partial=true;pseudo=true;start_range=.,5051 NZ_JJLL01000127.1 Protein Homology CDS 5051 5134 . - 0 ID=cds-AD11_RS32560;Parent=gene-AD11_RS32560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416858.1;locus_tag=AD11_RS32560;partial=true;product=hypothetical protein;pseudo=true;start_range=.,5051;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 5131 6114 . - . ID=gene-AD11_RS12560;Name=AD11_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12560;old_locus_tag=AD11_1923 NZ_JJLL01000127.1 Protein Homology CDS 5131 6114 . - 0 ID=cds-WP_033865524.1;Parent=gene-AD11_RS12560;Dbxref=GenBank:WP_033865524.1;Name=WP_033865524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000092424.1;locus_tag=AD11_RS12560;product=hypothetical protein;protein_id=WP_033865524.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 6111 6410 . - . ID=gene-AD11_RS12565;Name=AD11_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12565;old_locus_tag=AD11_1924 NZ_JJLL01000127.1 Protein Homology CDS 6111 6410 . - 0 ID=cds-WP_000995578.1;Parent=gene-AD11_RS12565;Dbxref=GenBank:WP_000995578.1;Name=WP_000995578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000995578.1;locus_tag=AD11_RS12565;product=hypothetical protein;protein_id=WP_000995578.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 6407 6631 . - . ID=gene-AD11_RS12570;Name=AD11_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12570;old_locus_tag=AD11_1925 NZ_JJLL01000127.1 Protein Homology CDS 6407 6631 . - 0 ID=cds-WP_021577600.1;Parent=gene-AD11_RS12570;Dbxref=GenBank:WP_021577600.1;Name=WP_021577600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401086.1;locus_tag=AD11_RS12570;product=hypothetical protein;protein_id=WP_021577600.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 6628 7518 . - . ID=gene-AD11_RS12575;Name=AD11_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12575;old_locus_tag=AD11_1926 NZ_JJLL01000127.1 Protein Homology CDS 6628 7518 . - 0 ID=cds-WP_225379710.1;Parent=gene-AD11_RS12575;Dbxref=GenBank:WP_225379710.1;Name=WP_225379710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02681.1;locus_tag=AD11_RS12575;product=Rha family phage regulatory protein;protein_id=WP_225379710.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 7448 7627 . - . ID=gene-AD11_RS32565;Name=AD11_RS32565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32565 NZ_JJLL01000127.1 Protein Homology CDS 7448 7627 . - 0 ID=cds-WP_071594570.1;Parent=gene-AD11_RS32565;Dbxref=GenBank:WP_071594570.1;Name=WP_071594570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542460.1;locus_tag=AD11_RS32565;product=DUF4222 domain-containing protein;protein_id=WP_071594570.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 7773 8330 . - . ID=gene-AD11_RS12580;Name=ymfL;gbkey=Gene;gene=ymfL;gene_biotype=protein_coding;locus_tag=AD11_RS12580;old_locus_tag=AD11_1927 NZ_JJLL01000127.1 Protein Homology CDS 7773 8330 . - 0 ID=cds-WP_000515850.1;Parent=gene-AD11_RS12580;Dbxref=GenBank:WP_000515850.1;Name=WP_000515850.1;gbkey=CDS;gene=ymfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415665.2;locus_tag=AD11_RS12580;product=protein YmfL;protein_id=WP_000515850.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 8323 8583 . - . ID=gene-AD11_RS12585;Name=AD11_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12585;old_locus_tag=AD11_1928 NZ_JJLL01000127.1 Protein Homology CDS 8323 8583 . - 0 ID=cds-WP_001191669.1;Parent=gene-AD11_RS12585;Dbxref=GenBank:WP_001191669.1;Name=WP_001191669.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191680.1;locus_tag=AD11_RS12585;product=helix-turn-helix domain-containing protein;protein_id=WP_001191669.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 8681 9373 . + . ID=gene-AD11_RS12590;Name=AD11_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12590;old_locus_tag=AD11_1929 NZ_JJLL01000127.1 Protein Homology CDS 8681 9373 . + 0 ID=cds-WP_001345148.1;Parent=gene-AD11_RS12590;Dbxref=GenBank:WP_001345148.1;Name=WP_001345148.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358750.1;locus_tag=AD11_RS12590;product=XRE family transcriptional regulator;protein_id=WP_001345148.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 10097 10459 . + . ID=gene-AD11_RS12600;Name=AD11_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12600;old_locus_tag=AD11_1930 NZ_JJLL01000127.1 Protein Homology CDS 10097 10459 . + 0 ID=cds-WP_000179185.1;Parent=gene-AD11_RS12600;Dbxref=GenBank:WP_000179185.1;Name=WP_000179185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416860.4;locus_tag=AD11_RS12600;product=hypothetical protein;protein_id=WP_000179185.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 10525 11349 . + . ID=gene-AD11_RS12605;Name=yfdQ;gbkey=Gene;gene=yfdQ;gene_biotype=protein_coding;locus_tag=AD11_RS12605;old_locus_tag=AD11_1931 NZ_JJLL01000127.1 Protein Homology CDS 10525 11349 . + 0 ID=cds-WP_033808897.1;Parent=gene-AD11_RS12605;Dbxref=GenBank:WP_033808897.1;Name=WP_033808897.1;gbkey=CDS;gene=yfdQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416861.1;locus_tag=AD11_RS12605;product=YfdQ family protein;protein_id=WP_033808897.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 11478 12014 . + . ID=gene-AD11_RS12610;Name=yfdR;gbkey=Gene;gene=yfdR;gene_biotype=protein_coding;locus_tag=AD11_RS12610;old_locus_tag=AD11_1932 NZ_JJLL01000127.1 Protein Homology CDS 11478 12014 . + 0 ID=cds-WP_000008232.1;Parent=gene-AD11_RS12610;Dbxref=GenBank:WP_000008232.1;Name=WP_000008232.1;gbkey=CDS;gene=yfdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416862.2;locus_tag=AD11_RS12610;product=5'-deoxynucleotidase;protein_id=WP_000008232.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 12005 12367 . + . ID=gene-AD11_RS12615;Name=AD11_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12615;old_locus_tag=AD11_1933 NZ_JJLL01000127.1 Protein Homology CDS 12005 12367 . + 0 ID=cds-WP_001242719.1;Parent=gene-AD11_RS12615;Dbxref=GenBank:WP_001242719.1;Name=WP_001242719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242743.1;locus_tag=AD11_RS12615;product=phage protein;protein_id=WP_001242719.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 12364 12567 . + . ID=gene-AD11_RS12620;Name=AD11_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12620;old_locus_tag=AD11_1934 NZ_JJLL01000127.1 Protein Homology CDS 12364 12567 . + 0 ID=cds-WP_000111289.1;Parent=gene-AD11_RS12620;Dbxref=GenBank:WP_000111289.1;Name=WP_000111289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705292.1;locus_tag=AD11_RS12620;product=hypothetical protein;protein_id=WP_000111289.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 12560 12799 . + . ID=gene-AD11_RS12625;Name=AD11_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12625;old_locus_tag=AD11_1935 NZ_JJLL01000127.1 Protein Homology CDS 12560 12799 . + 0 ID=cds-WP_000476207.1;Parent=gene-AD11_RS12625;Dbxref=GenBank:WP_000476207.1;Name=WP_000476207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000476205.1;locus_tag=AD11_RS12625;product=hypothetical protein;protein_id=WP_000476207.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 12796 13578 . + . ID=gene-AD11_RS12630;Name=AD11_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12630;old_locus_tag=AD11_1936 NZ_JJLL01000127.1 Protein Homology CDS 12796 13578 . + 0 ID=cds-WP_033865528.1;Parent=gene-AD11_RS12630;Dbxref=GenBank:WP_033865528.1;Name=WP_033865528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289921.1;locus_tag=AD11_RS12630;product=ead/Ea22-like family protein;protein_id=WP_033865528.1;transl_table=11 NZ_JJLL01000127.1 RefSeq pseudogene 13580 13999 . + . ID=gene-AD11_RS12635;Name=AD11_RS12635;end_range=13999,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS12635;old_locus_tag=AD11_1937;partial=true;pseudo=true NZ_JJLL01000127.1 Protein Homology CDS 13580 13999 . + 0 ID=cds-AD11_RS12635;Parent=gene-AD11_RS12635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13999,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238014.1;locus_tag=AD11_RS12635;partial=true;product=DUF551 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 14093 14335 . + . ID=gene-AD11_RS12640;Name=AD11_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12640 NZ_JJLL01000127.1 Protein Homology CDS 14093 14335 . + 0 ID=cds-WP_016232137.1;Parent=gene-AD11_RS12640;Dbxref=GenBank:WP_016232137.1;Name=WP_016232137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439258.1;locus_tag=AD11_RS12640;product=DUF4222 domain-containing protein;protein_id=WP_016232137.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 14339 14485 . + . ID=gene-AD11_RS12645;Name=AD11_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12645;old_locus_tag=AD11_1939 NZ_JJLL01000127.1 Protein Homology CDS 14339 14485 . + 0 ID=cds-WP_001030145.1;Parent=gene-AD11_RS12645;Dbxref=GenBank:WP_001030145.1;Name=WP_001030145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030144.1;locus_tag=AD11_RS12645;product=hypothetical protein;protein_id=WP_001030145.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 14494 14730 . + . ID=gene-AD11_RS12650;Name=AD11_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12650 NZ_JJLL01000127.1 Protein Homology CDS 14494 14730 . + 0 ID=cds-WP_000528717.1;Parent=gene-AD11_RS12650;Dbxref=GenBank:WP_000528717.1;Name=WP_000528717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000073102.1;locus_tag=AD11_RS12650;product=excisionase family protein;protein_id=WP_000528717.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 14786 16099 . + . ID=gene-AD11_RS12655;Name=AD11_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12655;old_locus_tag=AD11_1941 NZ_JJLL01000127.1 Protein Homology CDS 14786 16099 . + 0 ID=cds-WP_000362007.1;Parent=gene-AD11_RS12655;Dbxref=GenBank:WP_000362007.1;Name=WP_000362007.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361997.1;locus_tag=AD11_RS12655;product=tyrosine-type recombinase/integrase;protein_id=WP_000362007.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 16081 16851 . + . ID=gene-AD11_RS12660;Name=AD11_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12660;old_locus_tag=AD11_1942 NZ_JJLL01000127.1 Protein Homology CDS 16081 16851 . + 0 ID=cds-WP_050580157.1;Parent=gene-AD11_RS12660;Dbxref=GenBank:WP_050580157.1;Name=WP_050580157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244762.1;locus_tag=AD11_RS12660;product=DUF72 domain-containing protein;protein_id=WP_050580157.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 16904 17299 . + . ID=gene-AD11_RS12665;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AD11_RS12665;old_locus_tag=AD11_1943 NZ_JJLL01000127.1 Protein Homology CDS 16904 17299 . + 0 ID=cds-WP_000252980.1;Parent=gene-AD11_RS12665;Dbxref=GenBank:WP_000252980.1;Name=WP_000252980.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AD11_RS12665;product=MAPEG family protein;protein_id=WP_000252980.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 17340 18083 . + . ID=gene-AD11_RS12670;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AD11_RS12670;old_locus_tag=AD11_1944 NZ_JJLL01000127.1 Protein Homology CDS 17340 18083 . + 0 ID=cds-WP_000019585.1;Parent=gene-AD11_RS12670;Dbxref=GenBank:WP_000019585.1;Name=WP_000019585.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416384.1;locus_tag=AD11_RS12670;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019585.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 18080 19051 . + . ID=gene-AD11_RS12675;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AD11_RS12675;old_locus_tag=AD11_1945 NZ_JJLL01000127.1 Protein Homology CDS 18080 19051 . + 0 ID=cds-WP_000564750.1;Parent=gene-AD11_RS12675;Dbxref=GenBank:WP_000564750.1;Name=WP_000564750.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310608.1;locus_tag=AD11_RS12675;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000564750.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 19216 21645 . - . ID=gene-AD11_RS12680;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=AD11_RS12680;old_locus_tag=AD11_1946 NZ_JJLL01000127.1 Protein Homology CDS 19216 21645 . - 0 ID=cds-WP_033865533.1;Parent=gene-AD11_RS12680;Dbxref=GenBank:WP_033865533.1;Name=WP_033865533.1;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AD11_RS12680;product=trimethylamine N-oxide reductase TorZ;protein_id=WP_033865533.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 21670 22770 . - . ID=gene-AD11_RS12685;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=AD11_RS12685;old_locus_tag=AD11_1947 NZ_JJLL01000127.1 Protein Homology CDS 21670 22770 . - 0 ID=cds-WP_001214316.1;Parent=gene-AD11_RS12685;Dbxref=GenBank:WP_001214316.1;Name=WP_001214316.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707761.2;locus_tag=AD11_RS12685;product=NapC/NirT family cytochrome c;protein_id=WP_001214316.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 23158 23904 . - . ID=gene-AD11_RS12690;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AD11_RS12690;old_locus_tag=AD11_1948 NZ_JJLL01000127.1 Protein Homology CDS 23158 23904 . - 0 ID=cds-WP_033865535.1;Parent=gene-AD11_RS12690;Dbxref=GenBank:WP_033865535.1;Name=WP_033865535.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310611.2;locus_tag=AD11_RS12690;product=copper homeostasis protein CutC;protein_id=WP_033865535.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 23918 24484 . - . ID=gene-AD11_RS12695;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AD11_RS12695;old_locus_tag=AD11_1949 NZ_JJLL01000127.1 Protein Homology CDS 23918 24484 . - 0 ID=cds-WP_033865537.1;Parent=gene-AD11_RS12695;Dbxref=GenBank:WP_033865537.1;Name=WP_033865537.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AD11_RS12695;product=VOC family protein;protein_id=WP_033865537.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 24700 26433 . + . ID=gene-AD11_RS12700;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AD11_RS12700;old_locus_tag=AD11_1950 NZ_JJLL01000127.1 Protein Homology CDS 24700 26433 . + 0 ID=cds-WP_001025326.1;Parent=gene-AD11_RS12700;Dbxref=GenBank:WP_001025326.1;Name=WP_001025326.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AD11_RS12700;product=arginine--tRNA ligase;protein_id=WP_001025326.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 26475 26519 . - . ID=gene-AD11_RS32570;Name=yecV;gbkey=Gene;gene=yecV;gene_biotype=protein_coding;locus_tag=AD11_RS32570 NZ_JJLL01000127.1 Protein Homology CDS 26475 26519 . - 0 ID=cds-WP_211180499.1;Parent=gene-AD11_RS32570;Dbxref=GenBank:WP_211180499.1;Name=WP_211180499.1;gbkey=CDS;gene=yecV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AD11_RS32570;product=protein YecV;protein_id=WP_211180499.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 26610 27098 . + . ID=gene-AD11_RS12705;Name=yecT;gbkey=Gene;gene=yecT;gene_biotype=protein_coding;locus_tag=AD11_RS12705;old_locus_tag=AD11_1951 NZ_JJLL01000127.1 Protein Homology CDS 26610 27098 . + 0 ID=cds-WP_001299676.1;Parent=gene-AD11_RS12705;Dbxref=GenBank:WP_001299676.1;Name=WP_001299676.1;gbkey=CDS;gene=yecT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416391.4;locus_tag=AD11_RS12705;product=lysozyme inhibitor LprI family protein;protein_id=WP_001299676.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 27219 27611 . - . ID=gene-AD11_RS12710;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AD11_RS12710 NZ_JJLL01000127.1 Protein Homology CDS 27219 27611 . - 0 ID=cds-WP_001259584.1;Parent=gene-AD11_RS12710;Dbxref=GenBank:WP_001259584.1;Name=WP_001259584.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AD11_RS12710;product=flagellar protein FlhE;protein_id=WP_001259584.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 27611 29689 . - . ID=gene-AD11_RS12715;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD11_RS12715;old_locus_tag=AD11_1953 NZ_JJLL01000127.1 Protein Homology CDS 27611 29689 . - 0 ID=cds-WP_033865539.1;Parent=gene-AD11_RS12715;Dbxref=GenBank:WP_033865539.1;Name=WP_033865539.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AD11_RS12715;product=flagellar biosynthesis protein FlhA;protein_id=WP_033865539.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 29682 30830 . - . ID=gene-AD11_RS12720;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AD11_RS12720;old_locus_tag=AD11_1954 NZ_JJLL01000127.1 Protein Homology CDS 29682 30830 . - 0 ID=cds-WP_001278936.1;Parent=gene-AD11_RS12720;Dbxref=GenBank:WP_001278936.1;Name=WP_001278936.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AD11_RS12720;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278936.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 31032 31676 . - . ID=gene-AD11_RS12725;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AD11_RS12725;old_locus_tag=AD11_1955 NZ_JJLL01000127.1 Protein Homology CDS 31032 31676 . - 0 ID=cds-WP_000983609.1;Parent=gene-AD11_RS12725;Dbxref=GenBank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AD11_RS12725;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 31687 32076 . - . ID=gene-AD11_RS12730;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AD11_RS12730;old_locus_tag=AD11_1956 NZ_JJLL01000127.1 Protein Homology CDS 31687 32076 . - 0 ID=cds-WP_000763867.1;Parent=gene-AD11_RS12730;Dbxref=GenBank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AD11_RS12730;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 32091 33140 . - . ID=gene-AD11_RS12735;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AD11_RS12735;old_locus_tag=AD11_1957 NZ_JJLL01000127.1 Protein Homology CDS 32091 33140 . - 0 ID=cds-WP_000036371.1;Parent=gene-AD11_RS12735;Dbxref=GenBank:WP_000036371.1;Name=WP_000036371.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AD11_RS12735;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036371.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 33143 34003 . - . ID=gene-AD11_RS12740;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AD11_RS12740;old_locus_tag=AD11_1958 NZ_JJLL01000127.1 Protein Homology CDS 33143 34003 . - 0 ID=cds-WP_000204335.1;Parent=gene-AD11_RS12740;Dbxref=GenBank:WP_000204335.1;Name=WP_000204335.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AD11_RS12740;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204335.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 34022 35623 . - . ID=gene-AD11_RS12745;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AD11_RS12745;old_locus_tag=AD11_1959 NZ_JJLL01000127.1 Protein Homology CDS 34022 35623 . - 0 ID=cds-WP_000483221.1;Parent=gene-AD11_RS12745;Dbxref=GenBank:WP_000483221.1;Name=WP_000483221.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AD11_RS12745;product=methyl-accepting chemotaxis protein IV;protein_id=WP_000483221.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 35669 37330 . - . ID=gene-AD11_RS12750;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AD11_RS12750;old_locus_tag=AD11_1960 NZ_JJLL01000127.1 Protein Homology CDS 35669 37330 . - 0 ID=cds-WP_001297437.1;Parent=gene-AD11_RS12750;Dbxref=GenBank:WP_001297437.1;Name=WP_001297437.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AD11_RS12750;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 37475 37978 . - . ID=gene-AD11_RS12755;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AD11_RS12755;old_locus_tag=AD11_1961 NZ_JJLL01000127.1 Protein Homology CDS 37475 37978 . - 0 ID=cds-WP_000147302.1;Parent=gene-AD11_RS12755;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AD11_RS12755;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 37999 39963 . - . ID=gene-AD11_RS12760;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AD11_RS12760;old_locus_tag=AD11_1962 NZ_JJLL01000127.1 Protein Homology CDS 37999 39963 . - 0 ID=cds-WP_001355823.1;Parent=gene-AD11_RS12760;Dbxref=GenBank:WP_001355823.1;Name=WP_001355823.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310625.1;locus_tag=AD11_RS12760;product=chemotaxis protein CheA;protein_id=WP_001355823.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 39968 40894 . - . ID=gene-AD11_RS12765;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AD11_RS12765;old_locus_tag=AD11_1963 NZ_JJLL01000127.1 Protein Homology CDS 39968 40894 . - 0 ID=cds-WP_000795639.1;Parent=gene-AD11_RS12765;Dbxref=GenBank:WP_000795639.1;Name=WP_000795639.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AD11_RS12765;product=flagellar motor protein MotB;protein_id=WP_000795639.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 40891 41778 . - . ID=gene-AD11_RS12770;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AD11_RS12770;old_locus_tag=AD11_1964 NZ_JJLL01000127.1 Protein Homology CDS 40891 41778 . - 0 ID=cds-WP_000906336.1;Parent=gene-AD11_RS12770;Dbxref=GenBank:WP_000906336.1;Name=WP_000906336.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310627.1;locus_tag=AD11_RS12770;product=flagellar motor stator protein MotA;protein_id=WP_000906336.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 41905 42483 . - . ID=gene-AD11_RS12775;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AD11_RS12775;old_locus_tag=AD11_1965 NZ_JJLL01000127.1 Protein Homology CDS 41905 42483 . - 0 ID=cds-WP_001291603.1;Parent=gene-AD11_RS12775;Dbxref=GenBank:WP_001291603.1;Name=WP_001291603.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AD11_RS12775;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 42486 42836 . - . ID=gene-AD11_RS12780;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AD11_RS12780;old_locus_tag=AD11_1966 NZ_JJLL01000127.1 Protein Homology CDS 42486 42836 . - 0 ID=cds-WP_001295647.1;Parent=gene-AD11_RS12780;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AD11_RS12780;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 43616 44044 . + . ID=gene-AD11_RS12785;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AD11_RS12785;old_locus_tag=AD11_1967 NZ_JJLL01000127.1 Protein Homology CDS 43616 44044 . + 0 ID=cds-WP_000122426.1;Parent=gene-AD11_RS12785;Dbxref=GenBank:WP_000122426.1;Name=WP_000122426.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AD11_RS12785;product=universal stress protein UspC;protein_id=WP_000122426.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 44051 45475 . - . ID=gene-AD11_RS12790;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AD11_RS12790;old_locus_tag=AD11_1968 NZ_JJLL01000127.1 Protein Homology CDS 44051 45475 . - 0 ID=cds-WP_001295646.1;Parent=gene-AD11_RS12790;Dbxref=GenBank:WP_001295646.1;Name=WP_001295646.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AD11_RS12790;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 45450 46250 . - . ID=gene-AD11_RS12795;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AD11_RS12795;old_locus_tag=AD11_1969 NZ_JJLL01000127.1 Protein Homology CDS 45450 46250 . - 0 ID=cds-WP_001295645.1;Parent=gene-AD11_RS12795;Dbxref=GenBank:WP_001295645.1;Name=WP_001295645.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416411.1;locus_tag=AD11_RS12795;product=trehalose-phosphatase;protein_id=WP_001295645.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 46417 47403 . - . ID=gene-AD11_RS12800;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AD11_RS12800;old_locus_tag=AD11_1970 NZ_JJLL01000127.1 Protein Homology CDS 46417 47403 . - 0 ID=cds-WP_000100205.1;Parent=gene-AD11_RS12800;Dbxref=GenBank:WP_000100205.1;Name=WP_000100205.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AD11_RS12800;product=arabinose ABC transporter permease AraH;protein_id=WP_000100205.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 47418 48932 . - . ID=gene-AD11_RS12805;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AD11_RS12805;old_locus_tag=AD11_1971 NZ_JJLL01000127.1 Protein Homology CDS 47418 48932 . - 0 ID=cds-WP_001187819.1;Parent=gene-AD11_RS12805;Dbxref=GenBank:WP_001187819.1;Name=WP_001187819.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AD11_RS12805;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001187819.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 49002 49991 . - . ID=gene-AD11_RS12810;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=AD11_RS12810;old_locus_tag=AD11_1972 NZ_JJLL01000127.1 Protein Homology CDS 49002 49991 . - 0 ID=cds-WP_000548677.1;Parent=gene-AD11_RS12810;Dbxref=GenBank:WP_000548677.1;Name=WP_000548677.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310636.1;locus_tag=AD11_RS12810;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548677.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 50787 51290 . + . ID=gene-AD11_RS12815;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AD11_RS12815;old_locus_tag=AD11_1974 NZ_JJLL01000127.1 Protein Homology CDS 50787 51290 . + 0 ID=cds-WP_000179469.1;Parent=gene-AD11_RS12815;Dbxref=GenBank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AD11_RS12815;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 51369 51620 . - . ID=gene-AD11_RS12820;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AD11_RS12820;old_locus_tag=AD11_1975 NZ_JJLL01000127.1 Protein Homology CDS 51369 51620 . - 0 ID=cds-WP_000082120.1;Parent=gene-AD11_RS12820;Dbxref=GenBank:WP_000082120.1;Name=WP_000082120.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439259.1;locus_tag=AD11_RS12820;product=DUF2766 family protein YecJ;protein_id=WP_000082120.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 51735 51821 . - . ID=gene-AD11_RS30735;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AD11_RS30735 NZ_JJLL01000127.1 Protein Homology CDS 51735 51821 . - 0 ID=cds-WP_010723106.1;Parent=gene-AD11_RS30735;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AD11_RS30735;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 52084 52407 . + . ID=gene-AD11_RS12830;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AD11_RS12830;old_locus_tag=AD11_1978 NZ_JJLL01000127.1 Protein Homology CDS 52084 52407 . + 0 ID=cds-WP_001237866.1;Parent=gene-AD11_RS12830;Dbxref=GenBank:WP_001237866.1;Name=WP_001237866.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707794.1;locus_tag=AD11_RS12830;product=YecR-like lipofamily protein;protein_id=WP_001237866.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 52579 53076 . + . ID=gene-AD11_RS12835;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AD11_RS12835;old_locus_tag=AD11_1980 NZ_JJLL01000127.1 Protein Homology CDS 52579 53076 . + 0 ID=cds-WP_000917208.1;Parent=gene-AD11_RS12835;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AD11_RS12835;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 53114 53353 . - . ID=gene-AD11_RS12840;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AD11_RS12840;old_locus_tag=AD11_1981 NZ_JJLL01000127.1 Protein Homology CDS 53114 53353 . - 0 ID=cds-WP_000377224.1;Parent=gene-AD11_RS12840;Dbxref=GenBank:WP_000377224.1;Name=WP_000377224.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AD11_RS12840;product=YecH family metal-binding protein;protein_id=WP_000377224.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 53544 54755 . + . ID=gene-AD11_RS12845;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AD11_RS12845;old_locus_tag=AD11_1982 NZ_JJLL01000127.1 Protein Homology CDS 53544 54755 . + 0 ID=cds-WP_033865544.1;Parent=gene-AD11_RS12845;Dbxref=GenBank:WP_033865544.1;Name=WP_033865544.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416420.1;locus_tag=AD11_RS12845;product=tyrosine transporter TyrP;protein_id=WP_033865544.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 54806 55471 . - . ID=gene-AD11_RS12850;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AD11_RS12850;old_locus_tag=AD11_1983 NZ_JJLL01000127.1 Protein Homology CDS 54806 55471 . - 0 ID=cds-WP_001572768.1;Parent=gene-AD11_RS12850;Dbxref=GenBank:WP_001572768.1;Name=WP_001572768.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310643.1;locus_tag=AD11_RS12850;product=UPF0149 family protein YecA;protein_id=WP_001572768.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 56070 57941 . - . ID=gene-AD11_RS12855;Name=AD11_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12855;old_locus_tag=AD11_1984 NZ_JJLL01000127.1 Protein Homology CDS 56070 57941 . - 0 ID=cds-WP_001572770.1;Parent=gene-AD11_RS12855;Dbxref=GenBank:WP_001572770.1;Name=WP_001572770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687351.1;locus_tag=AD11_RS12855;product=DUF262 domain-containing protein;protein_id=WP_001572770.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 57999 58508 . - . ID=gene-AD11_RS12860;Name=AD11_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12860;old_locus_tag=AD11_1985 NZ_JJLL01000127.1 Protein Homology CDS 57999 58508 . - 0 ID=cds-WP_001572771.1;Parent=gene-AD11_RS12860;Dbxref=GenBank:WP_001572771.1;Name=WP_001572771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572771.1;locus_tag=AD11_RS12860;product=hypothetical protein;protein_id=WP_001572771.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 58560 59315 . - . ID=gene-AD11_RS12865;Name=AD11_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12865;old_locus_tag=AD11_1986 NZ_JJLL01000127.1 Protein Homology CDS 58560 59315 . - 0 ID=cds-WP_024193468.1;Parent=gene-AD11_RS12865;Dbxref=GenBank:WP_024193468.1;Name=WP_024193468.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009310009.1;locus_tag=AD11_RS12865;product=M48 family metallopeptidase;protein_id=WP_024193468.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 59312 62596 . - . ID=gene-AD11_RS12870;Name=AD11_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12870;old_locus_tag=AD11_1987 NZ_JJLL01000127.1 Protein Homology CDS 59312 62596 . - 0 ID=cds-WP_001572773.1;Parent=gene-AD11_RS12870;Dbxref=GenBank:WP_001572773.1;Name=WP_001572773.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001687655.1;locus_tag=AD11_RS12870;product=type I restriction endonuclease subunit R;protein_id=WP_001572773.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 62649 63332 . - . ID=gene-AD11_RS12875;Name=AD11_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12875;old_locus_tag=AD11_1988 NZ_JJLL01000127.1 Protein Homology CDS 62649 63332 . - 0 ID=cds-WP_000779013.1;Parent=gene-AD11_RS12875;Dbxref=GenBank:WP_000779013.1;Name=WP_000779013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779011.1;locus_tag=AD11_RS12875;product=YecA family protein;protein_id=WP_000779013.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 63329 64603 . - . ID=gene-AD11_RS12880;Name=AD11_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12880;old_locus_tag=AD11_1989 NZ_JJLL01000127.1 Protein Homology CDS 63329 64603 . - 0 ID=cds-WP_001572774.1;Parent=gene-AD11_RS12880;Dbxref=GenBank:WP_001572774.1;Name=WP_001572774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572774.1;locus_tag=AD11_RS12880;product=restriction endonuclease subunit S;protein_id=WP_001572774.1;transl_table=11 NZ_JJLL01000127.1 RefSeq gene 64593 66116 . - . ID=gene-AD11_RS12885;Name=AD11_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12885;old_locus_tag=AD11_1990 NZ_JJLL01000127.1 Protein Homology CDS 64593 66116 . - 0 ID=cds-WP_001572775.1;Parent=gene-AD11_RS12885;Dbxref=GenBank:WP_001572775.1;Name=WP_001572775.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007868837.1;locus_tag=AD11_RS12885;product=type I restriction-modification system subunit M;protein_id=WP_001572775.1;transl_table=11 NZ_JJLL01000127.1 RefSeq pseudogene 66524 66826 . + . ID=gene-AD11_RS12890;Name=AD11_RS12890;end_range=66826,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS12890;old_locus_tag=AD11_1991;partial=true;pseudo=true NZ_JJLL01000127.1 Protein Homology CDS 66524 66826 . + 0 ID=cds-AD11_RS12890;Parent=gene-AD11_RS12890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=66826,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AD11_RS12890;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLL01000127.1 RefSeq pseudogene 66894 67588 . + . ID=gene-AD11_RS29215;Name=AD11_RS29215;end_range=67588,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29215;old_locus_tag=AD11_1992;partial=true;pseudo=true NZ_JJLL01000127.1 Protein Homology CDS 66894 67588 . + 0 ID=cds-AD11_RS29215;Parent=gene-AD11_RS29215;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=67588,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AD11_RS29215;partial=true;product=IS30-like element IS30 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000128.1 1 23039 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000128.1 RefSeq region 1 23039 . + . ID=NZ_JJLL01000128.1:1..23039;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000128.1 RefSeq gene 1 193 . - . ID=gene-AD11_RS32575;Name=AD11_RS32575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32575;partial=true;start_range=.,1 NZ_JJLL01000128.1 GeneMarkS-2+ CDS 1 193 . - 0 ID=cds-WP_072148446.1-2;Parent=gene-AD11_RS32575;Dbxref=GenBank:WP_072148446.1;Name=WP_072148446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32575;partial=true;product=hypothetical protein;protein_id=WP_072148446.1;start_range=.,1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 622 2130 . + . ID=gene-AD11_RS12900;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AD11_RS12900;old_locus_tag=AD11_1993 NZ_JJLL01000128.1 Protein Homology CDS 622 2130 . + 0 ID=cds-WP_001189111.1-4;Parent=gene-AD11_RS12900;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AD11_RS12900;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 NZ_JJLL01000128.1 RefSeq pseudogene 2211 2699 . + . ID=gene-AD11_RS12905;Name=AD11_RS12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS12905;partial=true;pseudo=true;start_range=.,2211 NZ_JJLL01000128.1 Protein Homology CDS 2211 2699 . + 0 ID=cds-AD11_RS12905;Parent=gene-AD11_RS12905;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AD11_RS12905;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2211;transl_table=11 NZ_JJLL01000128.1 RefSeq pseudogene 2708 3349 . + . ID=gene-AD11_RS12910;Name=AD11_RS12910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS12910;old_locus_tag=AD11_1995;partial=true;pseudo=true;start_range=.,2708 NZ_JJLL01000128.1 Protein Homology CDS 2708 3349 . + 0 ID=cds-AD11_RS12910;Parent=gene-AD11_RS12910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005758486.1;locus_tag=AD11_RS12910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2708;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 3593 3679 . - . ID=gene-AD11_RS12915;Name=AD11_RS12915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS12915;old_locus_tag=AD11_1996 NZ_JJLL01000128.1 tRNAscan-SE tRNA 3593 3679 . - . ID=rna-AD11_RS12915;Parent=gene-AD11_RS12915;anticodon=(pos:complement(3643..3645));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12915;product=tRNA-Leu NZ_JJLL01000128.1 tRNAscan-SE exon 3593 3679 . - . ID=exon-AD11_RS12915-1;Parent=rna-AD11_RS12915;anticodon=(pos:complement(3643..3645));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12915;product=tRNA-Leu NZ_JJLL01000128.1 RefSeq gene 3692 3765 . - . ID=gene-AD11_RS12920;Name=AD11_RS12920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS12920;old_locus_tag=AD11_1997 NZ_JJLL01000128.1 tRNAscan-SE tRNA 3692 3765 . - . ID=rna-AD11_RS12920;Parent=gene-AD11_RS12920;anticodon=(pos:complement(3731..3733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12920;product=tRNA-Cys NZ_JJLL01000128.1 tRNAscan-SE exon 3692 3765 . - . ID=exon-AD11_RS12920-1;Parent=rna-AD11_RS12920;anticodon=(pos:complement(3731..3733));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12920;product=tRNA-Cys NZ_JJLL01000128.1 RefSeq gene 3820 3895 . - . ID=gene-AD11_RS12925;Name=AD11_RS12925;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS12925;old_locus_tag=AD11_1998 NZ_JJLL01000128.1 tRNAscan-SE tRNA 3820 3895 . - . ID=rna-AD11_RS12925;Parent=gene-AD11_RS12925;anticodon=(pos:complement(3860..3862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12925;product=tRNA-Gly NZ_JJLL01000128.1 tRNAscan-SE exon 3820 3895 . - . ID=exon-AD11_RS12925-1;Parent=rna-AD11_RS12925;anticodon=(pos:complement(3860..3862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS12925;product=tRNA-Gly NZ_JJLL01000128.1 RefSeq gene 4047 4595 . - . ID=gene-AD11_RS12930;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AD11_RS12930;old_locus_tag=AD11_1999 NZ_JJLL01000128.1 Protein Homology CDS 4047 4595 . - 0 ID=cds-WP_001572781.1;Parent=gene-AD11_RS12930;Dbxref=GenBank:WP_001572781.1;Name=WP_001572781.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AD11_RS12930;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001572781.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 4652 6484 . - . ID=gene-AD11_RS12935;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AD11_RS12935;old_locus_tag=AD11_2000 NZ_JJLL01000128.1 Protein Homology CDS 4652 6484 . - 0 ID=cds-WP_001283421.1;Parent=gene-AD11_RS12935;Dbxref=GenBank:WP_001283421.1;Name=WP_001283421.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AD11_RS12935;product=excinuclease ABC subunit UvrC;protein_id=WP_001283421.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 6481 7137 . - . ID=gene-AD11_RS12940;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AD11_RS12940;old_locus_tag=AD11_2001 NZ_JJLL01000128.1 Protein Homology CDS 6481 7137 . - 0 ID=cds-WP_000611328.1;Parent=gene-AD11_RS12940;Dbxref=GenBank:WP_000611328.1;Name=WP_000611328.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=AD11_RS12940;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611328.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 7279 7395 . + . ID=gene-AD11_RS33025;Name=AD11_RS33025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33025;old_locus_tag=AD11_2002 NZ_JJLL01000128.1 Protein Homology CDS 7279 7395 . + 0 ID=cds-WP_001302039.1;Parent=gene-AD11_RS33025;Dbxref=GenBank:WP_001302039.1;Name=WP_001302039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AD11_RS33025;product=hypothetical protein;protein_id=WP_001302039.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 7433 7609 . + . ID=gene-AD11_RS31585;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AD11_RS31585 NZ_JJLL01000128.1 Protein Homology CDS 7433 7609 . + 0 ID=cds-WP_000590344.1;Parent=gene-AD11_RS31585;Dbxref=GenBank:WP_000590344.1;Name=WP_000590344.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AD11_RS31585;product=protein YecU;protein_id=WP_000590344.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 7596 7820 . + . ID=gene-AD11_RS12950;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AD11_RS12950;old_locus_tag=AD11_2003 NZ_JJLL01000128.1 Protein Homology CDS 7596 7820 . + 0 ID=cds-WP_000106474.1;Parent=gene-AD11_RS12950;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AD11_RS12950;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 7887 8609 . - . ID=gene-AD11_RS12955;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AD11_RS12955;old_locus_tag=AD11_2004 NZ_JJLL01000128.1 Protein Homology CDS 7887 8609 . - 0 ID=cds-WP_001154267.1;Parent=gene-AD11_RS12955;Dbxref=GenBank:WP_001154267.1;Name=WP_001154267.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AD11_RS12955;product=transcriptional regulator SdiA;protein_id=WP_001154267.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 8839 9591 . - . ID=gene-AD11_RS12960;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AD11_RS12960;old_locus_tag=AD11_2005 NZ_JJLL01000128.1 Protein Homology CDS 8839 9591 . - 0 ID=cds-WP_001272994.1;Parent=gene-AD11_RS12960;Dbxref=GenBank:WP_001272994.1;Name=WP_001272994.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AD11_RS12960;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001272994.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 9588 10256 . - . ID=gene-AD11_RS12965;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AD11_RS12965;old_locus_tag=AD11_2006 NZ_JJLL01000128.1 Protein Homology CDS 9588 10256 . - 0 ID=cds-WP_001158220.1;Parent=gene-AD11_RS12965;Dbxref=GenBank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AD11_RS12965;product=cystine ABC transporter permease;protein_id=WP_001158220.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 10271 11257 . - . ID=gene-AD11_RS12970;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AD11_RS12970;old_locus_tag=AD11_2007 NZ_JJLL01000128.1 Protein Homology CDS 10271 11257 . - 0 ID=cds-WP_001614601.1;Parent=gene-AD11_RS12970;Dbxref=GenBank:WP_001614601.1;Name=WP_001614601.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AD11_RS12970;product=D-cysteine desulfhydrase;protein_id=WP_001614601.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 11362 12162 . - . ID=gene-AD11_RS12975;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AD11_RS12975;old_locus_tag=AD11_2008 NZ_JJLL01000128.1 Protein Homology CDS 11362 12162 . - 0 ID=cds-WP_001295643.1;Parent=gene-AD11_RS12975;Dbxref=GenBank:WP_001295643.1;Name=WP_001295643.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AD11_RS12975;product=cystine ABC transporter substrate-binding protein;protein_id=WP_001295643.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 12250 12801 . - . ID=gene-AD11_RS12980;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AD11_RS12980;old_locus_tag=AD11_2009 NZ_JJLL01000128.1 Protein Homology CDS 12250 12801 . - 0 ID=cds-WP_001344677.1;Parent=gene-AD11_RS12980;Dbxref=GenBank:WP_001344677.1;Name=WP_001344677.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AD11_RS12980;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001344677.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 12847 13566 . - . ID=gene-AD11_RS12985;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AD11_RS12985;old_locus_tag=AD11_2010 NZ_JJLL01000128.1 Protein Homology CDS 12847 13566 . - 0 ID=cds-WP_001087467.1;Parent=gene-AD11_RS12985;Dbxref=GenBank:WP_001087467.1;Name=WP_001087467.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AD11_RS12985;product=RNA polymerase sigma factor FliA;protein_id=WP_001087467.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 13731 15206 . - . ID=gene-AD11_RS12990;Name=AD11_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS12990;old_locus_tag=AD11_2011 NZ_JJLL01000128.1 Protein Homology CDS 13731 15206 . - 0 ID=cds-WP_033865556.1;Parent=gene-AD11_RS12990;Dbxref=GenBank:WP_033865556.1;Name=WP_033865556.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079822.1;locus_tag=AD11_RS12990;product=flagellin;protein_id=WP_033865556.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 15461 16873 . + . ID=gene-AD11_RS12995;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AD11_RS12995;old_locus_tag=AD11_2012 NZ_JJLL01000128.1 Protein Homology CDS 15461 16873 . + 0 ID=cds-WP_000146092.1;Parent=gene-AD11_RS12995;Dbxref=GenBank:WP_000146092.1;Name=WP_000146092.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616262.1;locus_tag=AD11_RS12995;product=flagellar filament capping protein FliD;protein_id=WP_000146092.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 16888 17298 . + . ID=gene-AD11_RS13000;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AD11_RS13000;old_locus_tag=AD11_2013 NZ_JJLL01000128.1 Protein Homology CDS 16888 17298 . + 0 ID=cds-WP_000287768.1;Parent=gene-AD11_RS13000;Dbxref=GenBank:WP_000287768.1;Name=WP_000287768.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AD11_RS13000;product=flagellar export chaperone FliS;protein_id=WP_000287768.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 17298 17663 . + . ID=gene-AD11_RS13005;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AD11_RS13005;old_locus_tag=AD11_2014 NZ_JJLL01000128.1 Protein Homology CDS 17298 17663 . + 0 ID=cds-WP_001015023.1;Parent=gene-AD11_RS13005;Dbxref=GenBank:WP_001015023.1;Name=WP_001015023.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310692.1;locus_tag=AD11_RS13005;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015023.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 17741 19228 . + . ID=gene-AD11_RS13010;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AD11_RS13010;old_locus_tag=AD11_2015 NZ_JJLL01000128.1 Protein Homology CDS 17741 19228 . + 0 ID=cds-WP_001614604.1;Parent=gene-AD11_RS13010;Dbxref=GenBank:WP_001614604.1;Name=WP_001614604.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AD11_RS13010;product=alpha-amylase;protein_id=WP_001614604.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 19262 19675 . - . ID=gene-AD11_RS13015;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AD11_RS13015;old_locus_tag=AD11_2016 NZ_JJLL01000128.1 Protein Homology CDS 19262 19675 . - 0 ID=cds-WP_000731731.1;Parent=gene-AD11_RS13015;Dbxref=GenBank:WP_000731731.1;Name=WP_000731731.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AD11_RS13015;product=lipoprotein YedD;protein_id=WP_000731731.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 19862 21067 . + . ID=gene-AD11_RS13020;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AD11_RS13020;old_locus_tag=AD11_2017 NZ_JJLL01000128.1 Protein Homology CDS 19862 21067 . + 0 ID=cds-WP_000118901.1;Parent=gene-AD11_RS13020;Dbxref=GenBank:WP_000118901.1;Name=WP_000118901.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AD11_RS13020;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118901.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 21064 21297 . + . ID=gene-AD11_RS13025;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AD11_RS13025;old_locus_tag=AD11_2018 NZ_JJLL01000128.1 Protein Homology CDS 21064 21297 . + 0 ID=cds-WP_000790504.1;Parent=gene-AD11_RS13025;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AD11_RS13025;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 21404 22075 . + . ID=gene-AD11_RS13030;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=AD11_RS13030;old_locus_tag=AD11_2019 NZ_JJLL01000128.1 Protein Homology CDS 21404 22075 . + 0 ID=cds-WP_033865557.1;Parent=gene-AD11_RS13030;Dbxref=GenBank:WP_033865557.1;Name=WP_033865557.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AD11_RS13030;product=SOS response-associated peptidase;protein_id=WP_033865557.1;transl_table=11 NZ_JJLL01000128.1 RefSeq gene 22115 23039 . - . ID=gene-AD11_RS13035;Name=AD11_RS13035;end_range=23039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13035;old_locus_tag=AD11_2020;partial=true NZ_JJLL01000128.1 Protein Homology CDS 22115 23039 . - 1 ID=cds-WP_033866422.1;Parent=gene-AD11_RS13035;Dbxref=GenBank:WP_033866422.1;Name=WP_033866422.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;end_range=23039,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AD11_RS13035;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_033866422.1;transl_table=11 ##sequence-region NZ_JJLL01000129.1 1 60013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000129.1 RefSeq region 1 60013 . + . ID=NZ_JJLL01000129.1:1..60013;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000129.1 RefSeq gene 28 725 . + . ID=gene-AD11_RS13040;Name=AD11_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13040;old_locus_tag=AD11_2021 NZ_JJLL01000129.1 Protein Homology CDS 28 277 . + 0 ID=cds-WP_094096600.1-3;Parent=gene-AD11_RS13040;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS13040;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JJLL01000129.1 Protein Homology CDS 277 725 . + 2 ID=cds-WP_094096600.1-3;Parent=gene-AD11_RS13040;Dbxref=GenBank:WP_094096600.1;Name=WP_094096600.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS13040;product=IS1-like element IS1A family transposase;protein_id=WP_094096600.1;transl_table=11 NZ_JJLL01000129.1 RefSeq pseudogene 742 1077 . - . ID=gene-AD11_RS13045;Name=AD11_RS13045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS13045;partial=true;pseudo=true;start_range=.,742 NZ_JJLL01000129.1 Protein Homology CDS 742 1077 . - 0 ID=cds-AD11_RS13045;Parent=gene-AD11_RS13045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415078.1;locus_tag=AD11_RS13045;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,742;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 1087 1638 . - . ID=gene-AD11_RS13050;Name=ybcL;gbkey=Gene;gene=ybcL;gene_biotype=protein_coding;locus_tag=AD11_RS13050 NZ_JJLL01000129.1 Protein Homology CDS 1087 1638 . - 0 ID=cds-WP_033865559.1;Parent=gene-AD11_RS13050;Dbxref=GenBank:WP_033865559.1;Name=WP_033865559.1;gbkey=CDS;gene=ybcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707821.1;locus_tag=AD11_RS13050;product=Raf kinase inhibitor-like protein YbcL;protein_id=WP_033865559.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 1807 2139 . - . ID=gene-AD11_RS13055;Name=emrE;gbkey=Gene;gene=emrE;gene_biotype=protein_coding;locus_tag=AD11_RS13055;old_locus_tag=AD11_2023 NZ_JJLL01000129.1 Protein Homology CDS 1807 2139 . - 0 ID=cds-WP_001070440.1;Parent=gene-AD11_RS13055;Dbxref=GenBank:WP_001070440.1;Name=WP_001070440.1;gbkey=CDS;gene=emrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707822.1;locus_tag=AD11_RS13055;product=multidrug efflux SMR transporter EmrE;protein_id=WP_001070440.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 2473 2787 . - . ID=gene-AD11_RS13065;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AD11_RS13065;old_locus_tag=AD11_2024 NZ_JJLL01000129.1 Protein Homology CDS 2473 2787 . - 0 ID=cds-WP_001274295.1;Parent=gene-AD11_RS13065;Dbxref=GenBank:WP_001274295.1;Name=WP_001274295.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=AD11_RS13065;product=flagellar hook-basal body complex protein FliE;protein_id=WP_001274295.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 3002 4660 . + . ID=gene-AD11_RS13070;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AD11_RS13070;old_locus_tag=AD11_2026 NZ_JJLL01000129.1 Protein Homology CDS 3002 4660 . + 0 ID=cds-WP_001614608.1;Parent=gene-AD11_RS13070;Dbxref=GenBank:WP_001614608.1;Name=WP_001614608.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310704.1;locus_tag=AD11_RS13070;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_001614608.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 4653 5648 . + . ID=gene-AD11_RS13075;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AD11_RS13075;old_locus_tag=AD11_2027 NZ_JJLL01000129.1 Protein Homology CDS 4653 5648 . + 0 ID=cds-WP_000067950.1;Parent=gene-AD11_RS13075;Dbxref=GenBank:WP_000067950.1;Name=WP_000067950.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=AD11_RS13075;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 5641 6327 . + . ID=gene-AD11_RS13080;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AD11_RS13080;old_locus_tag=AD11_2028 NZ_JJLL01000129.1 Protein Homology CDS 5641 6327 . + 0 ID=cds-WP_001614610.1;Parent=gene-AD11_RS13080;Dbxref=GenBank:WP_001614610.1;Name=WP_001614610.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=AD11_RS13080;product=flagellar assembly protein FliH;protein_id=WP_001614610.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 6327 7700 . + . ID=gene-AD11_RS13085;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AD11_RS13085;old_locus_tag=AD11_2029 NZ_JJLL01000129.1 Protein Homology CDS 6327 7700 . + 0 ID=cds-WP_000213294.1;Parent=gene-AD11_RS13085;Dbxref=GenBank:WP_000213294.1;Name=WP_000213294.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AD11_RS13085;product=flagellar protein export ATPase FliI;protein_id=WP_000213294.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 7719 8162 . + . ID=gene-AD11_RS13090;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AD11_RS13090;old_locus_tag=AD11_2030 NZ_JJLL01000129.1 Protein Homology CDS 7719 8162 . + 0 ID=cds-WP_000807584.1;Parent=gene-AD11_RS13090;Dbxref=GenBank:WP_000807584.1;Name=WP_000807584.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AD11_RS13090;product=flagellar export protein FliJ;protein_id=WP_000807584.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 8159 9286 . + . ID=gene-AD11_RS13095;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=AD11_RS13095;old_locus_tag=AD11_2031 NZ_JJLL01000129.1 Protein Homology CDS 8159 9286 . + 0 ID=cds-WP_001614611.1;Parent=gene-AD11_RS13095;Dbxref=GenBank:WP_001614611.1;Name=WP_001614611.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707828.1;locus_tag=AD11_RS13095;product=flagellar hook-length control protein FliK;protein_id=WP_001614611.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 9391 9855 . + . ID=gene-AD11_RS13100;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AD11_RS13100;old_locus_tag=AD11_2032 NZ_JJLL01000129.1 Protein Homology CDS 9391 9855 . + 0 ID=cds-WP_000133106.1;Parent=gene-AD11_RS13100;Dbxref=GenBank:WP_000133106.1;Name=WP_000133106.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=AD11_RS13100;product=flagellar basal body-associated protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 9860 10864 . + . ID=gene-AD11_RS13105;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AD11_RS13105;old_locus_tag=AD11_2033 NZ_JJLL01000129.1 Protein Homology CDS 9860 10864 . + 0 ID=cds-WP_001295641.1;Parent=gene-AD11_RS13105;Dbxref=GenBank:WP_001295641.1;Name=WP_001295641.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AD11_RS13105;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 10861 11274 . + . ID=gene-AD11_RS13110;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AD11_RS13110;old_locus_tag=AD11_2034 NZ_JJLL01000129.1 Protein Homology CDS 10861 11274 . + 0 ID=cds-WP_001282098.1;Parent=gene-AD11_RS13110;Dbxref=GenBank:WP_001282098.1;Name=WP_001282098.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=AD11_RS13110;product=flagellar motor switch protein FliN;protein_id=WP_001282098.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 11277 11642 . + . ID=gene-AD11_RS13115;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AD11_RS13115;old_locus_tag=AD11_2036 NZ_JJLL01000129.1 Protein Homology CDS 11277 11642 . + 0 ID=cds-WP_001348482.1;Parent=gene-AD11_RS13115;Dbxref=GenBank:WP_001348482.1;Name=WP_001348482.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=AD11_RS13115;product=flagellar biosynthetic protein FliO;protein_id=WP_001348482.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 11642 12379 . + . ID=gene-AD11_RS13120;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AD11_RS13120;old_locus_tag=AD11_2037 NZ_JJLL01000129.1 Protein Homology CDS 11642 12379 . + 0 ID=cds-WP_001253441.1;Parent=gene-AD11_RS13120;Dbxref=GenBank:WP_001253441.1;Name=WP_001253441.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=AD11_RS13120;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253441.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 12389 12658 . + . ID=gene-AD11_RS13125;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AD11_RS13125;old_locus_tag=AD11_2038 NZ_JJLL01000129.1 Protein Homology CDS 12389 12658 . + 0 ID=cds-WP_000187358.1;Parent=gene-AD11_RS13125;Dbxref=GenBank:WP_000187358.1;Name=WP_000187358.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=AD11_RS13125;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 12666 13451 . + . ID=gene-AD11_RS13130;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AD11_RS13130;old_locus_tag=AD11_2039 NZ_JJLL01000129.1 Protein Homology CDS 12666 13451 . + 0 ID=cds-WP_000942314.1;Parent=gene-AD11_RS13130;Dbxref=GenBank:WP_000942314.1;Name=WP_000942314.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=AD11_RS13130;product=flagellar biosynthetic protein FliR;protein_id=WP_000942314.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 13741 14364 . + . ID=gene-AD11_RS13135;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=AD11_RS13135;old_locus_tag=AD11_2040 NZ_JJLL01000129.1 Protein Homology CDS 13741 14364 . + 0 ID=cds-WP_000103987.1;Parent=gene-AD11_RS13135;Dbxref=GenBank:WP_000103987.1;Name=WP_000103987.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=AD11_RS13135;product=transcriptional regulator RcsA;protein_id=WP_000103987.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 14408 14596 . - . ID=gene-AD11_RS13140;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AD11_RS13140;old_locus_tag=AD11_2041 NZ_JJLL01000129.1 Protein Homology CDS 14408 14596 . - 0 ID=cds-WP_000867217.1;Parent=gene-AD11_RS13140;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AD11_RS13140;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 14759 14986 . + . ID=gene-AD11_RS13145;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AD11_RS13145;old_locus_tag=AD11_2042 NZ_JJLL01000129.1 Protein Homology CDS 14759 14986 . + 0 ID=cds-WP_000844800.1;Parent=gene-AD11_RS13145;Dbxref=GenBank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AD11_RS13145;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 15284 16099 . + . ID=gene-AD11_RS13150;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AD11_RS13150;old_locus_tag=AD11_2043 NZ_JJLL01000129.1 Protein Homology CDS 15284 16099 . + 0 ID=cds-WP_000491501.1;Parent=gene-AD11_RS13150;Dbxref=GenBank:WP_000491501.1;Name=WP_000491501.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AD11_RS13150;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000491501.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 16096 17790 . - . ID=gene-AD11_RS13155;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=AD11_RS13155;old_locus_tag=AD11_2044 NZ_JJLL01000129.1 Protein Homology CDS 16096 17790 . - 0 ID=cds-WP_001614621.1;Parent=gene-AD11_RS13155;Dbxref=GenBank:WP_001614621.1;Name=WP_001614621.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=AD11_RS13155;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_001614621.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 18028 18210 . - . ID=gene-AD11_RS13160;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AD11_RS13160;old_locus_tag=AD11_2045 NZ_JJLL01000129.1 Protein Homology CDS 18028 18210 . - 0 ID=cds-WP_000009306.1;Parent=gene-AD11_RS13160;Dbxref=GenBank:WP_000009306.1;Name=WP_000009306.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AD11_RS13160;product=YodC family protein;protein_id=WP_000009306.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 18289 19206 . - . ID=gene-AD11_RS13165;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AD11_RS13165;old_locus_tag=AD11_2046 NZ_JJLL01000129.1 Protein Homology CDS 18289 19206 . - 0 ID=cds-WP_000922683.1;Parent=gene-AD11_RS13165;Dbxref=GenBank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AD11_RS13165;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 19379 20299 . + . ID=gene-AD11_RS13170;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AD11_RS13170;old_locus_tag=AD11_2047 NZ_JJLL01000129.1 Protein Homology CDS 19379 20299 . + 0 ID=cds-WP_001212226.1;Parent=gene-AD11_RS13170;Dbxref=GenBank:WP_001212226.1;Name=WP_001212226.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AD11_RS13170;product=drug/metabolite exporter YedA;protein_id=WP_001212226.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 20288 20758 . - . ID=gene-AD11_RS13175;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AD11_RS13175;old_locus_tag=AD11_2048 NZ_JJLL01000129.1 Protein Homology CDS 20288 20758 . - 0 ID=cds-WP_000786004.1;Parent=gene-AD11_RS13175;Dbxref=GenBank:WP_000786004.1;Name=WP_000786004.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AD11_RS13175;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786004.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 20739 22157 . - . ID=gene-AD11_RS13180;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AD11_RS13180;old_locus_tag=AD11_2049 NZ_JJLL01000129.1 Protein Homology CDS 20739 22157 . - 0 ID=cds-WP_001157236.1;Parent=gene-AD11_RS13180;Dbxref=GenBank:WP_001157236.1;Name=WP_001157236.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AD11_RS13180;product=DNA-cytosine methyltransferase;protein_id=WP_001157236.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 22224 22919 . - . ID=gene-AD11_RS13185;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AD11_RS13185;old_locus_tag=AD11_2050 NZ_JJLL01000129.1 Protein Homology CDS 22224 22919 . - 0 ID=cds-WP_001614624.1;Parent=gene-AD11_RS13185;Dbxref=GenBank:WP_001614624.1;Name=WP_001614624.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310727.1;locus_tag=AD11_RS13185;product=phosphohydrolase;protein_id=WP_001614624.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 22959 23240 . - . ID=gene-AD11_RS13190;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AD11_RS13190;old_locus_tag=AD11_2051 NZ_JJLL01000129.1 Protein Homology CDS 22959 23240 . - 0 ID=cds-WP_001297704.1;Parent=gene-AD11_RS13190;Dbxref=GenBank:WP_001297704.1;Name=WP_001297704.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AD11_RS13190;product=cell division protein DrpB;protein_id=WP_001297704.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 23890 25071 . + . ID=gene-AD11_RS13200;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AD11_RS13200;old_locus_tag=AD11_2052 NZ_JJLL01000129.1 Protein Homology CDS 23890 25071 . + 0 ID=cds-WP_001614629.1;Parent=gene-AD11_RS13200;Dbxref=GenBank:WP_001614629.1;Name=WP_001614629.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551287.1;locus_tag=AD11_RS13200;product=porin OmpC;protein_id=WP_001614629.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 25663 26514 . + . ID=gene-AD11_RS13210;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AD11_RS13210;old_locus_tag=AD11_2054 NZ_JJLL01000129.1 Protein Homology CDS 25663 26514 . + 0 ID=cds-WP_000218212.1;Parent=gene-AD11_RS13210;Dbxref=GenBank:WP_000218212.1;Name=WP_000218212.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AD11_RS13210;product=glyoxalase III HchA;protein_id=WP_000218212.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 26622 27980 . - . ID=gene-AD11_RS13215;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AD11_RS13215;old_locus_tag=AD11_2055 NZ_JJLL01000129.1 Protein Homology CDS 26622 27980 . - 0 ID=cds-WP_001543853.1;Parent=gene-AD11_RS13215;Dbxref=GenBank:WP_001543853.1;Name=WP_001543853.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=AD11_RS13215;product=two-component system sensor histidine kinase HprS;protein_id=WP_001543853.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 27980 28651 . - . ID=gene-AD11_RS13220;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AD11_RS13220;old_locus_tag=AD11_2056 NZ_JJLL01000129.1 Protein Homology CDS 27980 28651 . - 0 ID=cds-WP_001723611.1;Parent=gene-AD11_RS13220;Dbxref=GenBank:WP_001723611.1;Name=WP_001723611.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AD11_RS13220;product=response regulator transcription factor HprR;protein_id=WP_001723611.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 28784 29197 . + . ID=gene-AD11_RS13225;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AD11_RS13225;old_locus_tag=AD11_2057 NZ_JJLL01000129.1 Protein Homology CDS 28784 29197 . + 0 ID=cds-WP_000920132.1;Parent=gene-AD11_RS13225;Dbxref=GenBank:WP_000920132.1;Name=WP_000920132.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310735.1;locus_tag=AD11_RS13225;product=hydroxyisourate hydrolase;protein_id=WP_000920132.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 29306 30310 . + . ID=gene-AD11_RS13230;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AD11_RS13230;old_locus_tag=AD11_2058 NZ_JJLL01000129.1 Protein Homology CDS 29306 30310 . + 0 ID=cds-WP_001614634.1;Parent=gene-AD11_RS13230;Dbxref=GenBank:WP_001614634.1;Name=WP_001614634.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AD11_RS13230;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_001614634.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 30311 30946 . + . ID=gene-AD11_RS13235;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AD11_RS13235;old_locus_tag=AD11_2059 NZ_JJLL01000129.1 Protein Homology CDS 30311 30946 . + 0 ID=cds-WP_001240105.1;Parent=gene-AD11_RS13235;Dbxref=GenBank:WP_001240105.1;Name=WP_001240105.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=AD11_RS13235;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240105.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 31203 31853 . + . ID=gene-AD11_RS13240;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AD11_RS13240;old_locus_tag=AD11_2060 NZ_JJLL01000129.1 Protein Homology CDS 31203 31853 . + 0 ID=cds-WP_024194379.1;Parent=gene-AD11_RS13240;Dbxref=GenBank:WP_024194379.1;Name=WP_024194379.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AD11_RS13240;product=metal-binding protein ZinT;protein_id=WP_024194379.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 32196 32726 . + . ID=gene-AD11_RS13245;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=AD11_RS13245;old_locus_tag=AD11_2061 NZ_JJLL01000129.1 Protein Homology CDS 32196 32726 . + 0 ID=cds-WP_001079074.1;Parent=gene-AD11_RS13245;Dbxref=GenBank:WP_001079074.1;Name=WP_001079074.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yodB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=AD11_RS13245;product=cytochrome b;protein_id=WP_001079074.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 33296 33385 . - . ID=gene-AD11_RS13255;Name=AD11_RS13255;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS13255;old_locus_tag=AD11_2062 NZ_JJLL01000129.1 tRNAscan-SE tRNA 33296 33385 . - . ID=rna-AD11_RS13255;Parent=gene-AD11_RS13255;anticodon=(pos:complement(33349..33351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13255;product=tRNA-Ser NZ_JJLL01000129.1 tRNAscan-SE exon 33296 33385 . - . ID=exon-AD11_RS13255-1;Parent=rna-AD11_RS13255;anticodon=(pos:complement(33349..33351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13255;product=tRNA-Ser NZ_JJLL01000129.1 RefSeq gene 33479 34276 . + . ID=gene-AD11_RS13260;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AD11_RS13260;old_locus_tag=AD11_2063 NZ_JJLL01000129.1 Protein Homology CDS 33479 34276 . + 0 ID=cds-WP_001320474.1;Parent=gene-AD11_RS13260;Dbxref=GenBank:WP_001320474.1;Name=WP_001320474.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AD11_RS13260;product=DgsA anti-repressor MtfA;protein_id=WP_001320474.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 34377 34452 . + . ID=gene-AD11_RS13265;Name=AD11_RS13265;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS13265;old_locus_tag=AD11_2064 NZ_JJLL01000129.1 tRNAscan-SE tRNA 34377 34452 . + . ID=rna-AD11_RS13265;Parent=gene-AD11_RS13265;anticodon=(pos:34410..34412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13265;product=tRNA-Asn NZ_JJLL01000129.1 tRNAscan-SE exon 34377 34452 . + . ID=exon-AD11_RS13265-1;Parent=rna-AD11_RS13265;anticodon=(pos:34410..34412);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13265;product=tRNA-Asn NZ_JJLL01000129.1 RefSeq gene 34763 41839 . + . ID=gene-AD11_RS13270;Name=yeeJ;gbkey=Gene;gene=yeeJ;gene_biotype=protein_coding;locus_tag=AD11_RS13270 NZ_JJLL01000129.1 Protein Homology CDS 34763 41839 . + 0 ID=cds-WP_032149428.1;Parent=gene-AD11_RS13270;Dbxref=GenBank:WP_032149428.1;Name=WP_032149428.1;gbkey=CDS;gene=yeeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416485.4;locus_tag=AD11_RS13270;product=inverse autotransporter adhesin YeeJ;protein_id=WP_032149428.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 42102 43154 . - . ID=gene-AD11_RS13275;Name=AD11_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13275;old_locus_tag=AD11_2067 NZ_JJLL01000129.1 Protein Homology CDS 42102 43154 . - 0 ID=cds-WP_000477873.1;Parent=gene-AD11_RS13275;Dbxref=GenBank:WP_000477873.1;Name=WP_000477873.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AD11_RS13275;product=glycosyltransferase family 9 protein;protein_id=WP_000477873.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 43469 44785 . + . ID=gene-AD11_RS13280;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AD11_RS13280;old_locus_tag=AD11_2068 NZ_JJLL01000129.1 Protein Homology CDS 43469 44785 . + 0 ID=cds-WP_033865562.1;Parent=gene-AD11_RS13280;Dbxref=GenBank:WP_033865562.1;Name=WP_033865562.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416488.1;locus_tag=AD11_RS13280;product=shikimate transporter;protein_id=WP_033865562.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 44887 46341 . + . ID=gene-AD11_RS13285;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AD11_RS13285;old_locus_tag=AD11_2069 NZ_JJLL01000129.1 Protein Homology CDS 44887 46341 . + 0 ID=cds-WP_001060231.1;Parent=gene-AD11_RS13285;Dbxref=GenBank:WP_001060231.1;Name=WP_001060231.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AD11_RS13285;product=AMP nucleosidase;protein_id=WP_001060231.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 46684 47400 . + . ID=gene-AD11_RS13290;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AD11_RS13290;old_locus_tag=AD11_2070 NZ_JJLL01000129.1 Protein Homology CDS 46684 47400 . + 0 ID=cds-WP_000532923.1;Parent=gene-AD11_RS13290;Dbxref=GenBank:WP_000532923.1;Name=WP_000532923.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416490.1;locus_tag=AD11_RS13290;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532923.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 47857 47932 . - . ID=gene-AD11_RS13295;Name=AD11_RS13295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS13295;old_locus_tag=AD11_2072 NZ_JJLL01000129.1 tRNAscan-SE tRNA 47857 47932 . - . ID=rna-AD11_RS13295;Parent=gene-AD11_RS13295;anticodon=(pos:complement(47897..47899));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13295;product=tRNA-Asn NZ_JJLL01000129.1 tRNAscan-SE exon 47857 47932 . - . ID=exon-AD11_RS13295-1;Parent=rna-AD11_RS13295;anticodon=(pos:complement(47897..47899));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13295;product=tRNA-Asn NZ_JJLL01000129.1 RefSeq gene 48033 49520 . - . ID=gene-AD11_RS13300;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=AD11_RS13300;old_locus_tag=AD11_2073 NZ_JJLL01000129.1 Protein Homology CDS 48033 49520 . - 0 ID=cds-WP_001323172.1;Parent=gene-AD11_RS13300;Dbxref=GenBank:WP_001323172.1;Name=WP_001323172.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AD11_RS13300;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_001323172.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 49681 49756 . + . ID=gene-AD11_RS13305;Name=AD11_RS13305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS13305;old_locus_tag=AD11_2074 NZ_JJLL01000129.1 tRNAscan-SE tRNA 49681 49756 . + . ID=rna-AD11_RS13305;Parent=gene-AD11_RS13305;anticodon=(pos:49714..49716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13305;product=tRNA-Asn NZ_JJLL01000129.1 tRNAscan-SE exon 49681 49756 . + . ID=exon-AD11_RS13305-1;Parent=rna-AD11_RS13305;anticodon=(pos:49714..49716);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13305;product=tRNA-Asn NZ_JJLL01000129.1 RefSeq gene 49794 50744 . - . ID=gene-AD11_RS13310;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AD11_RS13310;old_locus_tag=AD11_2075 NZ_JJLL01000129.1 Protein Homology CDS 49794 50744 . - 0 ID=cds-WP_001011039.1;Parent=gene-AD11_RS13310;Dbxref=GenBank:WP_001011039.1;Name=WP_001011039.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310810.1;locus_tag=AD11_RS13310;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011039.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 50846 51763 . - . ID=gene-AD11_RS13315;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AD11_RS13315;old_locus_tag=AD11_2076 NZ_JJLL01000129.1 Protein Homology CDS 50846 51763 . - 0 ID=cds-WP_033865563.1;Parent=gene-AD11_RS13315;Dbxref=GenBank:WP_033865563.1;Name=WP_033865563.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AD11_RS13315;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_033865563.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 52090 52165 . + . ID=gene-AD11_RS13320;Name=AD11_RS13320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS13320;old_locus_tag=AD11_2077 NZ_JJLL01000129.1 tRNAscan-SE tRNA 52090 52165 . + . ID=rna-AD11_RS13320;Parent=gene-AD11_RS13320;anticodon=(pos:52123..52125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13320;product=tRNA-Asn NZ_JJLL01000129.1 tRNAscan-SE exon 52090 52165 . + . ID=exon-AD11_RS13320-1;Parent=rna-AD11_RS13320;anticodon=(pos:52123..52125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS13320;product=tRNA-Asn NZ_JJLL01000129.1 RefSeq gene 52221 53156 . - . ID=gene-AD11_RS13325;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AD11_RS13325;old_locus_tag=AD11_2078 NZ_JJLL01000129.1 Protein Homology CDS 52221 53156 . - 0 ID=cds-WP_001310930.1;Parent=gene-AD11_RS13325;Dbxref=GenBank:WP_001310930.1;Name=WP_001310930.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707892.1;locus_tag=AD11_RS13325;product=L%2CD-transpeptidase;protein_id=WP_001310930.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 53218 54297 . - . ID=gene-AD11_RS13330;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AD11_RS13330;old_locus_tag=AD11_2079 NZ_JJLL01000129.1 Protein Homology CDS 53218 54297 . - 0 ID=cds-WP_001193786.1;Parent=gene-AD11_RS13330;Dbxref=GenBank:WP_001193786.1;Name=WP_001193786.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=AD11_RS13330;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_001193786.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 54309 55052 . - . ID=gene-AD11_RS13335;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AD11_RS13335;old_locus_tag=AD11_2080 NZ_JJLL01000129.1 Protein Homology CDS 54309 55052 . - 0 ID=cds-WP_033865564.1;Parent=gene-AD11_RS13335;Dbxref=GenBank:WP_033865564.1;Name=WP_033865564.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=AD11_RS13335;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_033865564.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 55049 55594 . - . ID=gene-AD11_RS13340;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AD11_RS13340;old_locus_tag=AD11_2081 NZ_JJLL01000129.1 Protein Homology CDS 55049 55594 . - 0 ID=cds-WP_000973176.1;Parent=gene-AD11_RS13340;Dbxref=GenBank:WP_000973176.1;Name=WP_000973176.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AD11_RS13340;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973176.1;transl_table=11 NZ_JJLL01000129.1 RefSeq pseudogene 55746 55889 . - . ID=gene-AD11_RS32580;Name=AD11_RS32580;end_range=55889,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32580;old_locus_tag=AD11_2082;partial=true;pseudo=true NZ_JJLL01000129.1 Protein Homology CDS 55746 55889 . - 0 ID=cds-AD11_RS32580;Parent=gene-AD11_RS32580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=55889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=AD11_RS32580;partial=true;product=cobalamin biosynthesis protein;pseudo=true;transl_table=11 NZ_JJLL01000129.1 RefSeq pseudogene 55898 56086 . - . ID=gene-AD11_RS32585;Name=AD11_RS32585;end_range=56086,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32585;partial=true;pseudo=true;start_range=.,55898 NZ_JJLL01000129.1 Protein Homology CDS 55898 56086 . - 0 ID=cds-AD11_RS32585;Parent=gene-AD11_RS32585;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=56086,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AD11_RS32585;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,55898;transl_table=11 NZ_JJLL01000129.1 RefSeq pseudogene 57111 57449 . + . ID=gene-AD11_RS30755;Name=AD11_RS30755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30755;partial=true;pseudo=true;start_range=.,57111 NZ_JJLL01000129.1 Protein Homology CDS 57111 57449 . + 0 ID=cds-AD11_RS30755;Parent=gene-AD11_RS30755;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AD11_RS30755;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,57111;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 57645 58859 . + . ID=gene-AD11_RS13360;Name=AD11_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13360;old_locus_tag=AD11_2085 NZ_JJLL01000129.1 Protein Homology CDS 57645 58859 . + 0 ID=cds-WP_000667429.1;Parent=gene-AD11_RS13360;Dbxref=GenBank:WP_000667429.1;Name=WP_000667429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462448.3;locus_tag=AD11_RS13360;product=PfkB family carbohydrate kinase;protein_id=WP_000667429.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 58873 59631 . + . ID=gene-AD11_RS13365;Name=AD11_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13365;old_locus_tag=AD11_2086 NZ_JJLL01000129.1 Protein Homology CDS 58873 59631 . + 0 ID=cds-WP_033865565.1;Parent=gene-AD11_RS13365;Dbxref=GenBank:WP_033865565.1;Name=WP_033865565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001066371.1;locus_tag=AD11_RS13365;product=glutamine amidotransferase;protein_id=WP_033865565.1;transl_table=11 NZ_JJLL01000129.1 RefSeq gene 59783 60013 . + . ID=gene-AD11_RS13375;Name=AD11_RS13375;end_range=60013,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13375;old_locus_tag=AD11_2087;partial=true NZ_JJLL01000129.1 Protein Homology CDS 59783 60013 . + 0 ID=cds-WP_000567701.1-2;Parent=gene-AD11_RS13375;Dbxref=GenBank:WP_000567701.1;Name=WP_000567701.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=60013,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AD11_RS13375;partial=true;product=transposase;protein_id=WP_000567701.1;transl_table=11 ##sequence-region NZ_JJLL01000130.1 1 4258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000130.1 RefSeq region 1 4258 . + . ID=NZ_JJLL01000130.1:1..4258;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000130.1 RefSeq gene 1 265 . + . ID=gene-AD11_RS32225;Name=AD11_RS32225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32225;partial=true;start_range=.,1 NZ_JJLL01000130.1 GeneMarkS-2+ CDS 1 265 . + 1 ID=cds-WP_071998701.1;Parent=gene-AD11_RS32225;Dbxref=GenBank:WP_071998701.1;Name=WP_071998701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32225;partial=true;product=hypothetical protein;protein_id=WP_071998701.1;start_range=.,1;transl_table=11 NZ_JJLL01000130.1 RefSeq pseudogene 258 683 . - . ID=gene-AD11_RS30760;Name=AD11_RS30760;end_range=683,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30760;partial=true;pseudo=true;start_range=.,258 NZ_JJLL01000130.1 Protein Homology CDS 258 683 . - 0 ID=cds-AD11_RS30760;Parent=gene-AD11_RS30760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AD11_RS30760;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,258;transl_table=11 NZ_JJLL01000130.1 RefSeq pseudogene 693 1784 . - . ID=gene-AD11_RS13390;Name=AD11_RS13390;end_range=1784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS13390;old_locus_tag=AD11_2088;partial=true;pseudo=true NZ_JJLL01000130.1 Protein Homology CDS 693 1784 . - 0 ID=cds-AD11_RS13390;Parent=gene-AD11_RS13390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1784,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415922.1;locus_tag=AD11_RS13390;partial=true;product=IS30-like element IS30 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000130.1 RefSeq gene 1872 2297 . + . ID=gene-AD11_RS13395;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS13395;old_locus_tag=AD11_2089 NZ_JJLL01000130.1 Protein Homology CDS 1872 2297 . + 0 ID=cds-WP_000422741.1-5;Parent=gene-AD11_RS13395;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AD11_RS13395;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLL01000130.1 RefSeq gene 2294 2644 . + . ID=gene-AD11_RS13400;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS13400;old_locus_tag=AD11_2090 NZ_JJLL01000130.1 Protein Homology CDS 2294 2644 . + 0 ID=cds-WP_000624722.1-5;Parent=gene-AD11_RS13400;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AD11_RS13400;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLL01000130.1 RefSeq gene 2675 4258 . + . ID=gene-AD11_RS13405;Name=AD11_RS13405;end_range=4258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13405;old_locus_tag=AD11_2091;partial=true NZ_JJLL01000130.1 Protein Homology CDS 2675 4258 . + 0 ID=cds-WP_033866187.1-2;Parent=gene-AD11_RS13405;Dbxref=GenBank:WP_033866187.1;Name=WP_033866187.1;Ontology_term=GO:0006313,GO:0004803;end_range=4258,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AD11_RS13405;partial=true;product=IS66-like element ISEc23 family transposase;protein_id=WP_033866187.1;transl_table=11 ##sequence-region NZ_JJLL01000131.1 1 7798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000131.1 RefSeq region 1 7798 . + . ID=NZ_JJLL01000131.1:1..7798;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000131.1 RefSeq gene 1 764 . + . ID=gene-AD11_RS13410;Name=AD11_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13410;old_locus_tag=AD11_2092;partial=true;start_range=.,1 NZ_JJLL01000131.1 Protein Homology CDS 1 764 . + 2 ID=cds-WP_033866433.1;Parent=gene-AD11_RS13410;Dbxref=GenBank:WP_033866433.1;Name=WP_033866433.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AD11_RS13410;partial=true;product=IS3 family transposase;protein_id=WP_033866433.1;start_range=.,1;transl_table=11 NZ_JJLL01000131.1 RefSeq pseudogene 807 1739 . + . ID=gene-AD11_RS32590;Name=AD11_RS32590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32590;pseudo=true NZ_JJLL01000131.1 Protein Homology CDS 807 1739 . + 0 ID=cds-AD11_RS32590;Parent=gene-AD11_RS32590;Note=internal stop;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001333640.1;locus_tag=AD11_RS32590;product=DMT family transporter;pseudo=true;transl_table=11 NZ_JJLL01000131.1 RefSeq pseudogene 1742 2777 . + . ID=gene-AD11_RS32595;Name=AD11_RS32595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32595;pseudo=true NZ_JJLL01000131.1 Protein Homology CDS 1742 2777 . + 0 ID=cds-AD11_RS32595;Parent=gene-AD11_RS32595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462451.1;locus_tag=AD11_RS32595;product=phosphotriesterase-related protein;pseudo=true;transl_table=11 NZ_JJLL01000131.1 RefSeq pseudogene 2817 3109 . - . ID=gene-AD11_RS29300;Name=AD11_RS29300;end_range=3109,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29300;partial=true;pseudo=true NZ_JJLL01000131.1 Protein Homology CDS 2817 3109 . - 0 ID=cds-AD11_RS29300;Parent=gene-AD11_RS29300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3109,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709217.2;locus_tag=AD11_RS29300;partial=true;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_JJLL01000131.1 RefSeq pseudogene 3189 4807 . - . ID=gene-AD11_RS30775;Name=AD11_RS30775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30775;pseudo=true NZ_JJLL01000131.1 Protein Homology CDS 3189 4807 . - 0 ID=cds-AD11_RS30775;Parent=gene-AD11_RS30775;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AD11_RS30775;product=ISL3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000131.1 RefSeq gene 5098 5502 . - . ID=gene-AD11_RS13445;Name=AD11_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13445;old_locus_tag=AD11_2100 NZ_JJLL01000131.1 Protein Homology CDS 5098 5502 . - 0 ID=cds-WP_001459868.1;Parent=gene-AD11_RS13445;Dbxref=GenBank:WP_001459868.1;Name=WP_001459868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001459868.1;locus_tag=AD11_RS13445;product=zinc-ribbon domain-containing protein;protein_id=WP_001459868.1;transl_table=11 NZ_JJLL01000131.1 RefSeq pseudogene 5688 6656 . + . ID=gene-AD11_RS31600;Name=AD11_RS31600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31600;pseudo=true NZ_JJLL01000131.1 Protein Homology CDS 5688 6656 . + 0 ID=cds-AD11_RS31600;Parent=gene-AD11_RS31600;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_079827324.1;locus_tag=AD11_RS31600;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000131.1 RefSeq pseudogene 6666 7058 . - . ID=gene-AD11_RS13460;Name=AD11_RS13460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS13460;old_locus_tag=AD11_2103;pseudo=true NZ_JJLL01000131.1 Protein Homology CDS 6666 7058 . - 0 ID=cds-AD11_RS13460;Parent=gene-AD11_RS13460;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000271005.1;locus_tag=AD11_RS13460;product=putative zinc ribbon protein;pseudo=true;transl_table=11 NZ_JJLL01000131.1 RefSeq gene 7224 7793 . - . ID=gene-AD11_RS13465;Name=AD11_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13465;old_locus_tag=AD11_2104 NZ_JJLL01000131.1 Protein Homology CDS 7224 7793 . - 0 ID=cds-WP_000221529.1;Parent=gene-AD11_RS13465;Dbxref=GenBank:WP_000221529.1;Name=WP_000221529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020238748.1;locus_tag=AD11_RS13465;product=inovirus Gp2 family protein;protein_id=WP_000221529.1;transl_table=11 ##sequence-region NZ_JJLL01000132.1 1 6491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000132.1 RefSeq region 1 6491 . + . ID=NZ_JJLL01000132.1:1..6491;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000132.1 RefSeq gene 1 1340 . - . ID=gene-AD11_RS13470;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AD11_RS13470;old_locus_tag=AD11_2105;partial=true;start_range=.,1 NZ_JJLL01000132.1 Protein Homology CDS 1 1340 . - 0 ID=cds-WP_033866437.1;Parent=gene-AD11_RS13470;Dbxref=GenBank:WP_033866437.1;Name=WP_033866437.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AD11_RS13470;partial=true;product=IS66 family transposase;protein_id=WP_033866437.1;start_range=.,1;transl_table=11 NZ_JJLL01000132.1 RefSeq gene 1360 1707 . - . ID=gene-AD11_RS13475;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AD11_RS13475;old_locus_tag=AD11_2106 NZ_JJLL01000132.1 Protein Homology CDS 1360 1707 . - 0 ID=cds-WP_000624622.1;Parent=gene-AD11_RS13475;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AD11_RS13475;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLL01000132.1 RefSeq gene 1707 2357 . - . ID=gene-AD11_RS13480;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AD11_RS13480;old_locus_tag=AD11_2107 NZ_JJLL01000132.1 Protein Homology CDS 1707 2357 . - 0 ID=cds-WP_033865577.1;Parent=gene-AD11_RS13480;Dbxref=GenBank:WP_033865577.1;Name=WP_033865577.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=AD11_RS13480;product=IS66-like element accessory protein TnpA;protein_id=WP_033865577.1;transl_table=11 NZ_JJLL01000132.1 RefSeq gene 2831 3037 . + . ID=gene-AD11_RS13490;Name=AD11_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13490;old_locus_tag=AD11_2108 NZ_JJLL01000132.1 Protein Homology CDS 2831 3037 . + 0 ID=cds-WP_001459870.1;Parent=gene-AD11_RS13490;Dbxref=GenBank:WP_001459870.1;Name=WP_001459870.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234041.1;locus_tag=AD11_RS13490;product=helix-turn-helix transcriptional regulator;protein_id=WP_001459870.1;transl_table=11 NZ_JJLL01000132.1 RefSeq gene 3131 3733 . + . ID=gene-AD11_RS13495;Name=AD11_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13495;old_locus_tag=AD11_2109 NZ_JJLL01000132.1 Protein Homology CDS 3131 3733 . + 0 ID=cds-WP_000813432.1;Parent=gene-AD11_RS13495;Dbxref=GenBank:WP_000813432.1;Name=WP_000813432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813428.1;locus_tag=AD11_RS13495;product=hypothetical protein;protein_id=WP_000813432.1;transl_table=11 NZ_JJLL01000132.1 RefSeq gene 4471 4623 . - . ID=gene-AD11_RS32080;Name=AD11_RS32080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32080;old_locus_tag=AD11_2110 NZ_JJLL01000132.1 Protein Homology CDS 4471 4623 . - 0 ID=cds-WP_000349537.1;Parent=gene-AD11_RS32080;Dbxref=GenBank:WP_000349537.1;Name=WP_000349537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298835.1;locus_tag=AD11_RS32080;product=hypothetical protein;protein_id=WP_000349537.1;transl_table=11 NZ_JJLL01000132.1 RefSeq gene 4662 5444 . - . ID=gene-AD11_RS13500;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AD11_RS13500;old_locus_tag=AD11_2111 NZ_JJLL01000132.1 Protein Homology CDS 4662 5444 . - 0 ID=cds-WP_001300609.1-3;Parent=gene-AD11_RS13500;Dbxref=GenBank:WP_001300609.1;Name=WP_001300609.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AD11_RS13500;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001300609.1;transl_table=11 NZ_JJLL01000132.1 RefSeq gene 5441 6463 . - . ID=gene-AD11_RS13505;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AD11_RS13505;old_locus_tag=AD11_2112 NZ_JJLL01000132.1 Protein Homology CDS 5441 6463 . - 0 ID=cds-WP_000255944.1-2;Parent=gene-AD11_RS13505;Dbxref=GenBank:WP_000255944.1;Name=WP_000255944.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AD11_RS13505;product=IS21-like element IS100 family transposase;protein_id=WP_000255944.1;transl_table=11 ##sequence-region NZ_JJLL01000133.1 1 142393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000133.1 RefSeq region 1 142393 . + . ID=NZ_JJLL01000133.1:1..142393;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000133.1 RefSeq gene 1 401 . + . ID=gene-AD11_RS13510;Name=AD11_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13510;old_locus_tag=AD11_2113;partial=true;start_range=.,1 NZ_JJLL01000133.1 Protein Homology CDS 1 401 . + 2 ID=cds-WP_023351899.1;Parent=gene-AD11_RS13510;Dbxref=GenBank:WP_023351899.1;Name=WP_023351899.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AD11_RS13510;partial=true;product=JAB domain-containing protein;protein_id=WP_023351899.1;start_range=.,1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 464 685 . + . ID=gene-AD11_RS13515;Name=yeeT;gbkey=Gene;gene=yeeT;gene_biotype=protein_coding;locus_tag=AD11_RS13515;old_locus_tag=AD11_2114 NZ_JJLL01000133.1 Protein Homology CDS 464 685 . + 0 ID=cds-WP_000692323.1;Parent=gene-AD11_RS13515;Dbxref=GenBank:WP_000692323.1;Name=WP_000692323.1;gbkey=CDS;gene=yeeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310831.1;locus_tag=AD11_RS13515;product=DUF987 domain-containing protein;protein_id=WP_000692323.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 759 1127 . + . ID=gene-AD11_RS13520;Name=cbeA;gbkey=Gene;gene=cbeA;gene_biotype=protein_coding;locus_tag=AD11_RS13520;old_locus_tag=AD11_2115 NZ_JJLL01000133.1 Protein Homology CDS 759 1127 . + 0 ID=cds-WP_001285585.1;Parent=gene-AD11_RS13520;Dbxref=GenBank:WP_001285585.1;Name=WP_001285585.1;gbkey=CDS;gene=cbeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310832.1;locus_tag=AD11_RS13520;product=type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA;protein_id=WP_001285585.1;transl_table=11 NZ_JJLL01000133.1 RefSeq pseudogene 1216 1589 . + . ID=gene-AD11_RS13525;Name=cbtA;gbkey=Gene;gene=cbtA;gene_biotype=pseudogene;locus_tag=AD11_RS13525;old_locus_tag=AD11_2116;pseudo=true NZ_JJLL01000133.1 Protein Homology CDS 1216 1589 . + 0 ID=cds-AD11_RS13525;Parent=gene-AD11_RS13525;Note=frameshifted;gbkey=CDS;gene=cbtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416509.1;locus_tag=AD11_RS13525;product=type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA;pseudo=true;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 1586 1780 . + . ID=gene-AD11_RS13530;Name=yeeW;gbkey=Gene;gene=yeeW;gene_biotype=protein_coding;locus_tag=AD11_RS13530;old_locus_tag=AD11_2117 NZ_JJLL01000133.1 Protein Homology CDS 1586 1780 . + 0 ID=cds-WP_000988600.1;Parent=gene-AD11_RS13530;Dbxref=GenBank:WP_000988600.1;Name=WP_000988600.1;gbkey=CDS;gene=yeeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310834.2;locus_tag=AD11_RS13530;product=DUF5983 family protein;protein_id=WP_000988600.1;transl_table=11 NZ_JJLL01000133.1 RefSeq pseudogene 1814 1906 . + . ID=gene-AD11_RS31605;Name=AD11_RS31605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31605;old_locus_tag=AD11_2118;partial=true;pseudo=true;start_range=.,1814 NZ_JJLL01000133.1 Protein Homology CDS 1814 1906 . + 0 ID=cds-AD11_RS31605;Parent=gene-AD11_RS31605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AD11_RS31605;partial=true;product=DUF957 domain-containing protein;pseudo=true;start_range=.,1814;transl_table=11 NZ_JJLL01000133.1 RefSeq pseudogene 2195 2332 . - . ID=gene-AD11_RS13540;Name=AD11_RS13540;end_range=2332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS13540;partial=true;pseudo=true NZ_JJLL01000133.1 Protein Homology CDS 2195 2332 . - 0 ID=cds-AD11_RS13540;Parent=gene-AD11_RS13540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AD11_RS13540;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 2395 2577 . + . ID=gene-AD11_RS13545;Name=AD11_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13545;old_locus_tag=AD11_2119 NZ_JJLL01000133.1 Protein Homology CDS 2395 2577 . + 0 ID=cds-WP_001016348.1;Parent=gene-AD11_RS13545;Dbxref=GenBank:WP_001016348.1;Name=WP_001016348.1;Ontology_term=GO:0006576,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296208.1;locus_tag=AD11_RS13545;product=EutP/PduV family microcompartment system protein;protein_id=WP_001016348.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 2678 3007 . - . ID=gene-AD11_RS13550;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AD11_RS13550;old_locus_tag=AD11_2120 NZ_JJLL01000133.1 Protein Homology CDS 2678 3007 . - 0 ID=cds-WP_000450409.1;Parent=gene-AD11_RS13550;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AD11_RS13550;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 3179 4237 . - . ID=gene-AD11_RS13555;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AD11_RS13555;old_locus_tag=AD11_2122 NZ_JJLL01000133.1 Protein Homology CDS 3179 4237 . - 0 ID=cds-WP_001200905.1;Parent=gene-AD11_RS13555;Dbxref=GenBank:WP_001200905.1;Name=WP_001200905.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AD11_RS13555;product=FUSC family protein;protein_id=WP_001200905.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 4435 4908 . - . ID=gene-AD11_RS13560;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AD11_RS13560;old_locus_tag=AD11_2123 NZ_JJLL01000133.1 Protein Homology CDS 4435 4908 . - 0 ID=cds-WP_001105393.1;Parent=gene-AD11_RS13560;Dbxref=GenBank:WP_001105393.1;Name=WP_001105393.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AD11_RS13560;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105393.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 5027 6193 . - . ID=gene-AD11_RS13565;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AD11_RS13565;old_locus_tag=AD11_2124 NZ_JJLL01000133.1 Protein Homology CDS 5027 6193 . - 0 ID=cds-WP_000830163.1;Parent=gene-AD11_RS13565;Dbxref=GenBank:WP_000830163.1;Name=WP_000830163.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AD11_RS13565;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_000830163.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 6402 7829 . + . ID=gene-AD11_RS13570;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AD11_RS13570;old_locus_tag=AD11_2125 NZ_JJLL01000133.1 Protein Homology CDS 6402 7829 . + 0 ID=cds-WP_077747103.1;Parent=gene-AD11_RS13570;Dbxref=GenBank:WP_077747103.1;Name=WP_077747103.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310840.1;locus_tag=AD11_RS13570;product=exodeoxyribonuclease I;protein_id=WP_077747103.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 7872 8099 . - . ID=gene-AD11_RS13575;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AD11_RS13575;old_locus_tag=AD11_2126 NZ_JJLL01000133.1 Protein Homology CDS 7872 8099 . - 0 ID=cds-WP_000985273.1;Parent=gene-AD11_RS13575;Dbxref=GenBank:WP_000985273.1;Name=WP_000985273.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AD11_RS13575;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_000985273.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 8113 9171 . - . ID=gene-AD11_RS13580;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AD11_RS13580;old_locus_tag=AD11_2127 NZ_JJLL01000133.1 Protein Homology CDS 8113 9171 . - 0 ID=cds-WP_000492324.1;Parent=gene-AD11_RS13580;Dbxref=GenBank:WP_000492324.1;Name=WP_000492324.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AD11_RS13580;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_000492324.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 9350 10708 . - . ID=gene-AD11_RS13585;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AD11_RS13585;old_locus_tag=AD11_2129 NZ_JJLL01000133.1 Protein Homology CDS 9350 10708 . - 0 ID=cds-WP_000019197.1;Parent=gene-AD11_RS13585;Dbxref=GenBank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AD11_RS13585;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 10698 10760 . - . ID=gene-AD11_RS31610;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AD11_RS31610 NZ_JJLL01000133.1 Protein Homology CDS 10698 10760 . - 0 ID=cds-WP_010723108.1;Parent=gene-AD11_RS31610;Dbxref=GenBank:WP_010723108.1;Name=WP_010723108.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AD11_RS31610;product=membrane protein YoeI;protein_id=WP_010723108.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 10975 11904 . - . ID=gene-AD11_RS13590;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=AD11_RS13590;old_locus_tag=AD11_2130 NZ_JJLL01000133.1 Protein Homology CDS 10975 11904 . - 0 ID=cds-WP_000803351.1;Parent=gene-AD11_RS13590;Dbxref=GenBank:WP_000803351.1;Name=WP_000803351.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AD11_RS13590;product=LysR substrate-binding domain-containing protein;protein_id=WP_000803351.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 11950 12774 . - . ID=gene-AD11_RS13595;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=AD11_RS13595;old_locus_tag=AD11_2131 NZ_JJLL01000133.1 Protein Homology CDS 11950 12774 . - 0 ID=cds-WP_000754758.1;Parent=gene-AD11_RS13595;Dbxref=GenBank:WP_000754758.1;Name=WP_000754758.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=yeeZ;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AD11_RS13595;product=SDR family oxidoreductase;protein_id=WP_000754758.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 12857 13111 . - . ID=gene-AD11_RS13600;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;locus_tag=AD11_RS13600;old_locus_tag=AD11_2132 NZ_JJLL01000133.1 Protein Homology CDS 12857 13111 . - 0 ID=cds-WP_000767829.1;Parent=gene-AD11_RS13600;Dbxref=GenBank:WP_000767829.1;Name=WP_000767829.1;gbkey=CDS;gene=yoeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707909.1;locus_tag=AD11_RS13600;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;protein_id=WP_000767829.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 13108 13359 . - . ID=gene-AD11_RS13605;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=AD11_RS13605;old_locus_tag=AD11_2133 NZ_JJLL01000133.1 Protein Homology CDS 13108 13359 . - 0 ID=cds-WP_001259255.1;Parent=gene-AD11_RS13605;Dbxref=GenBank:WP_001259255.1;Name=WP_001259255.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416521.2;locus_tag=AD11_RS13605;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_001259255.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 13642 13692 . + . ID=gene-AD11_RS29325;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AD11_RS29325 NZ_JJLL01000133.1 Protein Homology CDS 13642 13692 . + 0 ID=cds-WP_001364200.1;Parent=gene-AD11_RS29325;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AD11_RS29325;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_JJLL01000133.1 cmsearch sequence_feature 13668 13791 . + . ID=id-NZ_JJLL01000133.1:13668..13791;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLL01000133.1 RefSeq gene 13838 14737 . + . ID=gene-AD11_RS13610;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AD11_RS13610;old_locus_tag=AD11_2134 NZ_JJLL01000133.1 Protein Homology CDS 13838 14737 . + 0 ID=cds-WP_000131782.1;Parent=gene-AD11_RS13610;Dbxref=GenBank:WP_000131782.1;Name=WP_000131782.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AD11_RS13610;product=ATP phosphoribosyltransferase;protein_id=WP_000131782.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 14743 16047 . + . ID=gene-AD11_RS13615;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AD11_RS13615;old_locus_tag=AD11_2135 NZ_JJLL01000133.1 Protein Homology CDS 14743 16047 . + 0 ID=cds-WP_033865584.1;Parent=gene-AD11_RS13615;Dbxref=GenBank:WP_033865584.1;Name=WP_033865584.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416524.1;locus_tag=AD11_RS13615;product=histidinol dehydrogenase;protein_id=WP_033865584.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 16044 17114 . + . ID=gene-AD11_RS13620;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AD11_RS13620;old_locus_tag=AD11_2136 NZ_JJLL01000133.1 Protein Homology CDS 16044 17114 . + 0 ID=cds-WP_033865585.1;Parent=gene-AD11_RS13620;Dbxref=GenBank:WP_033865585.1;Name=WP_033865585.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310849.1;locus_tag=AD11_RS13620;product=histidinol-phosphate transaminase;protein_id=WP_033865585.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 17114 18181 . + . ID=gene-AD11_RS13625;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AD11_RS13625;old_locus_tag=AD11_2137 NZ_JJLL01000133.1 Protein Homology CDS 17114 18181 . + 0 ID=cds-WP_033865586.1;Parent=gene-AD11_RS13625;Dbxref=GenBank:WP_033865586.1;Name=WP_033865586.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=AD11_RS13625;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_033865586.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 18181 18771 . + . ID=gene-AD11_RS13630;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AD11_RS13630;old_locus_tag=AD11_2138 NZ_JJLL01000133.1 Protein Homology CDS 18181 18771 . + 0 ID=cds-WP_001103560.1;Parent=gene-AD11_RS13630;Dbxref=GenBank:WP_001103560.1;Name=WP_001103560.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AD11_RS13630;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001103560.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 18771 19508 . + . ID=gene-AD11_RS13635;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AD11_RS13635;old_locus_tag=AD11_2139 NZ_JJLL01000133.1 Protein Homology CDS 18771 19508 . + 0 ID=cds-WP_000586428.1;Parent=gene-AD11_RS13635;Dbxref=GenBank:WP_000586428.1;Name=WP_000586428.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310852.2;locus_tag=AD11_RS13635;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_000586428.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 19490 20266 . + . ID=gene-AD11_RS13640;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AD11_RS13640;old_locus_tag=AD11_2140 NZ_JJLL01000133.1 Protein Homology CDS 19490 20266 . + 0 ID=cds-WP_000880193.1;Parent=gene-AD11_RS13640;Dbxref=GenBank:WP_000880193.1;Name=WP_000880193.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AD11_RS13640;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_000880193.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 20260 20871 . + . ID=gene-AD11_RS13645;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AD11_RS13645;old_locus_tag=AD11_2141 NZ_JJLL01000133.1 Protein Homology CDS 20260 20871 . + 0 ID=cds-WP_000954876.1;Parent=gene-AD11_RS13645;Dbxref=GenBank:WP_000954876.1;Name=WP_000954876.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=AD11_RS13645;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_000954876.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 20969 21946 . - . ID=gene-AD11_RS13650;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=AD11_RS13650;old_locus_tag=AD11_2142 NZ_JJLL01000133.1 Protein Homology CDS 20969 21946 . - 0 ID=cds-WP_033865587.1;Parent=gene-AD11_RS13650;Dbxref=GenBank:WP_033865587.1;Name=WP_033865587.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310855.3;locus_tag=AD11_RS13650;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_033865587.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 22093 23259 . - . ID=gene-AD11_RS13655;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AD11_RS13655;old_locus_tag=AD11_2143 NZ_JJLL01000133.1 Protein Homology CDS 22093 23259 . - 0 ID=cds-WP_033865588.1;Parent=gene-AD11_RS13655;Dbxref=GenBank:WP_033865588.1;Name=WP_033865588.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416532.1;locus_tag=AD11_RS13655;product=UDP-glucose 6-dehydrogenase;protein_id=WP_033865588.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 23506 24912 . - . ID=gene-AD11_RS13660;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AD11_RS13660;old_locus_tag=AD11_2144 NZ_JJLL01000133.1 Protein Homology CDS 23506 24912 . - 0 ID=cds-WP_033865589.1;Parent=gene-AD11_RS13660;Dbxref=GenBank:WP_033865589.1;Name=WP_033865589.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310857.1;locus_tag=AD11_RS13660;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_033865589.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 25072 25812 . - . ID=gene-AD11_RS13665;Name=AD11_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13665;old_locus_tag=AD11_2145 NZ_JJLL01000133.1 Protein Homology CDS 25072 25812 . - 0 ID=cds-WP_349251411.1;Parent=gene-AD11_RS13665;Dbxref=GenBank:WP_349251411.1;Name=WP_349251411.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945805.1;locus_tag=AD11_RS13665;product=glycosyltransferase family 2 protein;protein_id=WP_349251411.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 25809 26966 . - . ID=gene-AD11_RS13670;Name=wzy;gbkey=Gene;gene=wzy;gene_biotype=protein_coding;locus_tag=AD11_RS13670;old_locus_tag=AD11_2146 NZ_JJLL01000133.1 Protein Homology CDS 25809 26966 . - 0 ID=cds-WP_033865591.1;Parent=gene-AD11_RS13670;Dbxref=GenBank:WP_033865591.1;Name=WP_033865591.1;gbkey=CDS;gene=wzy;inference=COORDINATES: similar to AA sequence:RefSeq:WP_033865591.1;locus_tag=AD11_RS13670;product=O61 family O-antigen polymerase;protein_id=WP_033865591.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 26959 27912 . - . ID=gene-AD11_RS13675;Name=AD11_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13675;old_locus_tag=AD11_2147 NZ_JJLL01000133.1 GeneMarkS-2+ CDS 26959 27912 . - 0 ID=cds-WP_033865593.1;Parent=gene-AD11_RS13675;Dbxref=GenBank:WP_033865593.1;Name=WP_033865593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS13675;product=hypothetical protein;protein_id=WP_033865593.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 27893 29119 . - . ID=gene-AD11_RS13680;Name=wzx;gbkey=Gene;gene=wzx;gene_biotype=protein_coding;locus_tag=AD11_RS13680;old_locus_tag=AD11_2148 NZ_JJLL01000133.1 Protein Homology CDS 27893 29119 . - 0 ID=cds-WP_033865594.1;Parent=gene-AD11_RS13680;Dbxref=GenBank:WP_033865594.1;Name=WP_033865594.1;gbkey=CDS;gene=wzx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_033865594.1;locus_tag=AD11_RS13680;product=O61 family O-antigen flippase;protein_id=WP_033865594.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 29112 29666 . - . ID=gene-AD11_RS32890;Name=AD11_RS32890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32890 NZ_JJLL01000133.1 Protein Homology CDS 29112 29666 . - 0 ID=cds-WP_170882963.1;Parent=gene-AD11_RS32890;Dbxref=GenBank:WP_170882963.1;Name=WP_170882963.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: protein motif:HMM:NF025953.6;locus_tag=AD11_RS32890;product=acyltransferase;protein_id=WP_170882963.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 29663 30424 . - . ID=gene-AD11_RS13690;Name=AD11_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13690;old_locus_tag=AD11_2150 NZ_JJLL01000133.1 Protein Homology CDS 29663 30424 . - 0 ID=cds-WP_033865596.1;Parent=gene-AD11_RS13690;Dbxref=GenBank:WP_033865596.1;Name=WP_033865596.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431996.1;locus_tag=AD11_RS13690;product=oxidoreductase;protein_id=WP_033865596.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 30417 31112 . - . ID=gene-AD11_RS13695;Name=AD11_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13695 NZ_JJLL01000133.1 Protein Homology CDS 30417 31112 . - 0 ID=cds-WP_033865598.1;Parent=gene-AD11_RS13695;Dbxref=GenBank:WP_033865598.1;Name=WP_033865598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431994.1;locus_tag=AD11_RS13695;product=cytidylyltransferase domain-containing protein;protein_id=WP_033865598.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 31109 32092 . - . ID=gene-AD11_RS13700;Name=AD11_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13700;old_locus_tag=AD11_2152 NZ_JJLL01000133.1 Protein Homology CDS 31109 32092 . - 0 ID=cds-WP_033865599.1;Parent=gene-AD11_RS13700;Dbxref=GenBank:WP_033865599.1;Name=WP_033865599.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431992.1;locus_tag=AD11_RS13700;product=Gfo/Idh/MocA family protein;protein_id=WP_033865599.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 32095 33153 . - . ID=gene-AD11_RS13705;Name=AD11_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13705;old_locus_tag=AD11_2153 NZ_JJLL01000133.1 Protein Homology CDS 32095 33153 . - 0 ID=cds-WP_033865600.1;Parent=gene-AD11_RS13705;Dbxref=GenBank:WP_033865600.1;Name=WP_033865600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004723045.1;locus_tag=AD11_RS13705;product=nucleotidyltransferase family protein;protein_id=WP_033865600.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 33172 33819 . - . ID=gene-AD11_RS13710;Name=AD11_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13710;old_locus_tag=AD11_2154 NZ_JJLL01000133.1 Protein Homology CDS 33172 33819 . - 0 ID=cds-WP_033865601.1;Parent=gene-AD11_RS13710;Dbxref=GenBank:WP_033865601.1;Name=WP_033865601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03570.1;locus_tag=AD11_RS13710;product=acetyltransferase;protein_id=WP_033865601.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 33812 34885 . - . ID=gene-AD11_RS13715;Name=neuB;gbkey=Gene;gene=neuB;gene_biotype=protein_coding;locus_tag=AD11_RS13715;old_locus_tag=AD11_2155 NZ_JJLL01000133.1 Protein Homology CDS 33812 34885 . - 0 ID=cds-WP_033865602.1;Parent=gene-AD11_RS13715;Dbxref=GenBank:WP_033865602.1;Name=WP_033865602.1;Ontology_term=GO:0016051,GO:0003824;gbkey=CDS;gene=neuB;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431983.1;locus_tag=AD11_RS13715;product=N-acetylneuraminate synthase;protein_id=WP_033865602.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 34892 36055 . - . ID=gene-AD11_RS13720;Name=neuC;gbkey=Gene;gene=neuC;gene_biotype=protein_coding;locus_tag=AD11_RS13720;old_locus_tag=AD11_2156 NZ_JJLL01000133.1 Protein Homology CDS 34892 36055 . - 0 ID=cds-WP_033865603.1;Parent=gene-AD11_RS13720;Dbxref=GenBank:WP_033865603.1;Name=WP_033865603.1;Ontology_term=GO:0006047,GO:0008761;gbkey=CDS;gene=neuC;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=UDP-N-acetylglucosamine metabolic process|0006047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431979.1;locus_tag=AD11_RS13720;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_033865603.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 36061 37203 . - . ID=gene-AD11_RS13725;Name=AD11_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13725;old_locus_tag=AD11_2157 NZ_JJLL01000133.1 Protein Homology CDS 36061 37203 . - 0 ID=cds-WP_033865604.1;Parent=gene-AD11_RS13725;Dbxref=GenBank:WP_033865604.1;Name=WP_033865604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431976.1;locus_tag=AD11_RS13725;product=LegC family aminotransferase;protein_id=WP_033865604.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 37218 38408 . - . ID=gene-AD11_RS13730;Name=AD11_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13730;old_locus_tag=AD11_2158 NZ_JJLL01000133.1 Protein Homology CDS 37218 38408 . - 0 ID=cds-WP_033865605.1;Parent=gene-AD11_RS13730;Dbxref=GenBank:WP_033865605.1;Name=WP_033865605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431973.1;locus_tag=AD11_RS13730;product=UDP-N-acetylglucosamine 4%2C6-dehydratase;protein_id=WP_033865605.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 38842 39735 . - . ID=gene-AD11_RS13735;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AD11_RS13735;old_locus_tag=AD11_2159 NZ_JJLL01000133.1 Protein Homology CDS 38842 39735 . - 0 ID=cds-WP_000183060.1;Parent=gene-AD11_RS13735;Dbxref=GenBank:WP_000183060.1;Name=WP_000183060.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=AD11_RS13735;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_000183060.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 39978 40973 . - . ID=gene-AD11_RS13740;Name=AD11_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13740;old_locus_tag=AD11_2160 NZ_JJLL01000133.1 Protein Homology CDS 39978 40973 . - 0 ID=cds-WP_000999466.1;Parent=gene-AD11_RS13740;Dbxref=GenBank:WP_000999466.1;Name=WP_000999466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310874.1;locus_tag=AD11_RS13740;product=N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans%2Coctacis-undecaprenol 4-epimerase;protein_id=WP_000999466.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 41131 42525 . - . ID=gene-AD11_RS13745;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=AD11_RS13745;old_locus_tag=AD11_2161 NZ_JJLL01000133.1 Protein Homology CDS 41131 42525 . - 0 ID=cds-WP_033865606.1;Parent=gene-AD11_RS13745;Dbxref=GenBank:WP_033865606.1;Name=WP_033865606.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310875.1;locus_tag=AD11_RS13745;product=colanic acid biosynthesis protein WcaM;protein_id=WP_033865606.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 42536 43756 . - . ID=gene-AD11_RS13750;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=AD11_RS13750;old_locus_tag=AD11_2162 NZ_JJLL01000133.1 Protein Homology CDS 42536 43756 . - 0 ID=cds-WP_029397743.1;Parent=gene-AD11_RS13750;Dbxref=GenBank:WP_029397743.1;Name=WP_029397743.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=AD11_RS13750;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_029397743.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 43753 45033 . - . ID=gene-AD11_RS13755;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AD11_RS13755;old_locus_tag=AD11_2163 NZ_JJLL01000133.1 Protein Homology CDS 43753 45033 . - 0 ID=cds-WP_029397742.1;Parent=gene-AD11_RS13755;Dbxref=GenBank:WP_029397742.1;Name=WP_029397742.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310877.1;locus_tag=AD11_RS13755;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_029397742.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 45309 46787 . - . ID=gene-AD11_RS13760;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=AD11_RS13760;old_locus_tag=AD11_2164 NZ_JJLL01000133.1 Protein Homology CDS 45309 46787 . - 0 ID=cds-WP_033865607.1;Parent=gene-AD11_RS13760;Dbxref=GenBank:WP_033865607.1;Name=WP_033865607.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AD11_RS13760;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_033865607.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 46789 48183 . - . ID=gene-AD11_RS13765;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=AD11_RS13765;old_locus_tag=AD11_2165 NZ_JJLL01000133.1 Protein Homology CDS 46789 48183 . - 0 ID=cds-WP_025670468.1;Parent=gene-AD11_RS13765;Dbxref=GenBank:WP_025670468.1;Name=WP_025670468.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416551.1;locus_tag=AD11_RS13765;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_025670468.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 48238 49608 . - . ID=gene-AD11_RS13770;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=AD11_RS13770;old_locus_tag=AD11_2166 NZ_JJLL01000133.1 Protein Homology CDS 48238 49608 . - 0 ID=cds-WP_001296216.1;Parent=gene-AD11_RS13770;Dbxref=GenBank:WP_001296216.1;Name=WP_001296216.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310880.1;locus_tag=AD11_RS13770;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_001296216.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 49889 51325 . - . ID=gene-AD11_RS13775;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=AD11_RS13775;old_locus_tag=AD11_2167 NZ_JJLL01000133.1 Protein Homology CDS 49889 51325 . - 0 ID=cds-WP_000079243.1;Parent=gene-AD11_RS13775;Dbxref=GenBank:WP_000079243.1;Name=WP_000079243.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=AD11_RS13775;product=mannose-1-phosphate guanyltransferase;protein_id=WP_000079243.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 51328 52551 . - . ID=gene-AD11_RS13780;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=AD11_RS13780;old_locus_tag=AD11_2168 NZ_JJLL01000133.1 Protein Homology CDS 51328 52551 . - 0 ID=cds-WP_000699704.1;Parent=gene-AD11_RS13780;Dbxref=GenBank:WP_000699704.1;Name=WP_000699704.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707945.1;locus_tag=AD11_RS13780;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_000699704.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 52548 53027 . - . ID=gene-AD11_RS13785;Name=gmm;gbkey=Gene;gene=gmm;gene_biotype=protein_coding;gene_synonym=nudD,wcaH,yefC;locus_tag=AD11_RS13785;old_locus_tag=AD11_2169 NZ_JJLL01000133.1 Protein Homology CDS 52548 53027 . - 0 ID=cds-WP_000479841.1;Parent=gene-AD11_RS13785;Dbxref=GenBank:WP_000479841.1;Name=WP_000479841.1;gbkey=CDS;gene=gmm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416555.2;locus_tag=AD11_RS13785;product=GDP-mannose mannosyl hydrolase;protein_id=WP_000479841.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 53030 53995 . - . ID=gene-AD11_RS13790;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AD11_RS13790;old_locus_tag=AD11_2170 NZ_JJLL01000133.1 Protein Homology CDS 53030 53995 . - 0 ID=cds-WP_000043606.1;Parent=gene-AD11_RS13790;Dbxref=GenBank:WP_000043606.1;Name=WP_000043606.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310884.1;locus_tag=AD11_RS13790;product=GDP-L-fucose synthase;protein_id=WP_000043606.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 53998 55119 . - . ID=gene-AD11_RS13795;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AD11_RS13795;old_locus_tag=AD11_2171 NZ_JJLL01000133.1 Protein Homology CDS 53998 55119 . - 0 ID=cds-WP_000048190.1;Parent=gene-AD11_RS13795;Dbxref=GenBank:WP_000048190.1;Name=WP_000048190.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=AD11_RS13795;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_000048190.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 55146 55694 . - . ID=gene-AD11_RS13800;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=AD11_RS13800;old_locus_tag=AD11_2172 NZ_JJLL01000133.1 Protein Homology CDS 55146 55694 . - 0 ID=cds-WP_001153547.1;Parent=gene-AD11_RS13800;Dbxref=GenBank:WP_001153547.1;Name=WP_001153547.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=AD11_RS13800;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_001153547.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 55710 56456 . - . ID=gene-AD11_RS13805;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=AD11_RS13805;old_locus_tag=AD11_2173 NZ_JJLL01000133.1 Protein Homology CDS 55710 56456 . - 0 ID=cds-WP_000927028.1;Parent=gene-AD11_RS13805;Dbxref=GenBank:WP_000927028.1;Name=WP_000927028.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310887.1;locus_tag=AD11_RS13805;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_000927028.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 56467 57684 . - . ID=gene-AD11_RS13810;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=AD11_RS13810;old_locus_tag=AD11_2174 NZ_JJLL01000133.1 Protein Homology CDS 56467 57684 . - 0 ID=cds-WP_000107816.1;Parent=gene-AD11_RS13810;Dbxref=GenBank:WP_000107816.1;Name=WP_000107816.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416560.1;locus_tag=AD11_RS13810;product=colanic acid polymerase WcaD;protein_id=WP_000107816.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 57659 58876 . - . ID=gene-AD11_RS13815;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=AD11_RS13815;old_locus_tag=AD11_2175 NZ_JJLL01000133.1 Protein Homology CDS 57659 58876 . - 0 ID=cds-WP_001023946.1;Parent=gene-AD11_RS13815;Dbxref=GenBank:WP_001023946.1;Name=WP_001023946.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310889.1;locus_tag=AD11_RS13815;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_001023946.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 58873 59361 . - . ID=gene-AD11_RS13820;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=AD11_RS13820;old_locus_tag=AD11_2176 NZ_JJLL01000133.1 Protein Homology CDS 58873 59361 . - 0 ID=cds-WP_033865608.1;Parent=gene-AD11_RS13820;Dbxref=GenBank:WP_033865608.1;Name=WP_033865608.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310890.1;locus_tag=AD11_RS13820;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_033865608.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 59364 60203 . - . ID=gene-AD11_RS13825;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AD11_RS13825;old_locus_tag=AD11_2177 NZ_JJLL01000133.1 Protein Homology CDS 59364 60203 . - 0 ID=cds-WP_000654491.1;Parent=gene-AD11_RS13825;Dbxref=GenBank:WP_000654491.1;Name=WP_000654491.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=AD11_RS13825;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_000654491.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 60296 62458 . - . ID=gene-AD11_RS13830;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=AD11_RS13830;old_locus_tag=AD11_2178 NZ_JJLL01000133.1 Protein Homology CDS 60296 62458 . - 0 ID=cds-WP_033865609.1;Parent=gene-AD11_RS13830;Dbxref=GenBank:WP_033865609.1;Name=WP_033865609.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AD11_RS13830;product=tyrosine-protein kinase Wzc;protein_id=WP_033865609.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 62461 62904 . - . ID=gene-AD11_RS13835;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AD11_RS13835;old_locus_tag=AD11_2179 NZ_JJLL01000133.1 Protein Homology CDS 62461 62904 . - 0 ID=cds-WP_000482901.1;Parent=gene-AD11_RS13835;Dbxref=GenBank:WP_000482901.1;Name=WP_000482901.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AD11_RS13835;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482901.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 62910 64049 . - . ID=gene-AD11_RS13840;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=AD11_RS13840;old_locus_tag=AD11_2180 NZ_JJLL01000133.1 Protein Homology CDS 62910 64049 . - 0 ID=cds-WP_000978094.1;Parent=gene-AD11_RS13840;Dbxref=GenBank:WP_000978094.1;Name=WP_000978094.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AD11_RS13840;product=polysaccharide export protein Wza;protein_id=WP_000978094.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 64708 66291 . + . ID=gene-AD11_RS13845;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AD11_RS13845;old_locus_tag=AD11_2182 NZ_JJLL01000133.1 Protein Homology CDS 64708 66291 . + 0 ID=cds-WP_000454701.1;Parent=gene-AD11_RS13845;Dbxref=GenBank:WP_000454701.1;Name=WP_000454701.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416567.4;locus_tag=AD11_RS13845;product=TerC family protein;protein_id=WP_000454701.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 66565 68418 . - . ID=gene-AD11_RS13850;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AD11_RS13850;old_locus_tag=AD11_2183 NZ_JJLL01000133.1 Protein Homology CDS 66565 68418 . - 0 ID=cds-WP_001252331.1;Parent=gene-AD11_RS13850;Dbxref=GenBank:WP_001252331.1;Name=WP_001252331.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AD11_RS13850;product=outer membrane assembly protein AsmA;protein_id=WP_001252331.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 68440 69021 . - . ID=gene-AD11_RS13855;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AD11_RS13855;old_locus_tag=AD11_2184 NZ_JJLL01000133.1 Protein Homology CDS 68440 69021 . - 0 ID=cds-WP_001234767.1;Parent=gene-AD11_RS13855;Dbxref=GenBank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AD11_RS13855;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 69113 69754 . - . ID=gene-AD11_RS13860;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AD11_RS13860;old_locus_tag=AD11_2185 NZ_JJLL01000133.1 Protein Homology CDS 69113 69754 . - 0 ID=cds-WP_001295424.1;Parent=gene-AD11_RS13860;Dbxref=GenBank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AD11_RS13860;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 70072 73389 . + . ID=gene-AD11_RS13865;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=AD11_RS13865;old_locus_tag=AD11_2186 NZ_JJLL01000133.1 Protein Homology CDS 70072 73389 . + 0 ID=cds-WP_000043763.1;Parent=gene-AD11_RS13865;Dbxref=GenBank:WP_000043763.1;Name=WP_000043763.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AD11_RS13865;product=diguanylate cyclase;protein_id=WP_000043763.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 73498 74346 . - . ID=gene-AD11_RS13870;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AD11_RS13870;old_locus_tag=AD11_2187 NZ_JJLL01000133.1 Protein Homology CDS 73498 74346 . - 0 ID=cds-WP_000288420.1;Parent=gene-AD11_RS13870;Dbxref=GenBank:WP_000288420.1;Name=WP_000288420.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416572.1;locus_tag=AD11_RS13870;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_000288420.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 74480 75832 . + . ID=gene-AD11_RS13880;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AD11_RS13880;old_locus_tag=AD11_2188 NZ_JJLL01000133.1 Protein Homology CDS 74480 75832 . + 0 ID=cds-WP_000469709.1;Parent=gene-AD11_RS13880;Dbxref=GenBank:WP_000469709.1;Name=WP_000469709.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AD11_RS13880;product=molecular chaperone;protein_id=WP_000469709.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 75844 77790 . - . ID=gene-AD11_RS13885;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AD11_RS13885;old_locus_tag=AD11_2189 NZ_JJLL01000133.1 Protein Homology CDS 75844 77790 . - 0 ID=cds-WP_000856088.1;Parent=gene-AD11_RS13885;Dbxref=GenBank:WP_000856088.1;Name=WP_000856088.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416574.1;locus_tag=AD11_RS13885;product=protein kinase YegI;protein_id=WP_000856088.1;transl_table=11 NZ_JJLL01000133.1 RefSeq pseudogene 77990 78450 . + . ID=gene-AD11_RS13890;Name=yegJ;gbkey=Gene;gene=yegJ;gene_biotype=pseudogene;locus_tag=AD11_RS13890;old_locus_tag=AD11_2190;pseudo=true NZ_JJLL01000133.1 Protein Homology CDS 77990 78450 . + 0 ID=cds-AD11_RS13890;Parent=gene-AD11_RS13890;Note=frameshifted;gbkey=CDS;gene=yegJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416575.1;locus_tag=AD11_RS13890;product=YegJ family protein;pseudo=true;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 78515 79276 . - . ID=gene-AD11_RS13895;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=AD11_RS13895;old_locus_tag=AD11_2191 NZ_JJLL01000133.1 Protein Homology CDS 78515 79276 . - 0 ID=cds-WP_000119090.1;Parent=gene-AD11_RS13895;Dbxref=GenBank:WP_000119090.1;Name=WP_000119090.1;gbkey=CDS;gene=pphC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416576.1;locus_tag=AD11_RS13895;product=protein-serine/threonine phosphatase PphC;protein_id=WP_000119090.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 79273 79932 . - . ID=gene-AD11_RS13900;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=AD11_RS13900;old_locus_tag=AD11_2192 NZ_JJLL01000133.1 Protein Homology CDS 79273 79932 . - 0 ID=cds-WP_000003154.1;Parent=gene-AD11_RS13900;Dbxref=GenBank:WP_000003154.1;Name=WP_000003154.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416577.1;locus_tag=AD11_RS13900;product=vWA domain-containing protein;protein_id=WP_000003154.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 80153 80212 . - . ID=gene-AD11_RS30785;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AD11_RS30785 NZ_JJLL01000133.1 Protein Homology CDS 80153 80212 . - 0 ID=cds-WP_010723109.1;Parent=gene-AD11_RS30785;Dbxref=GenBank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AD11_RS30785;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 80485 80541 . - . ID=gene-AD11_RS31615;Name=AD11_RS31615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31615 NZ_JJLL01000133.1 Protein Homology CDS 80485 80541 . - 0 ID=cds-WP_012767741.1;Parent=gene-AD11_RS31615;Dbxref=GenBank:WP_012767741.1;Name=WP_012767741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791248.1;locus_tag=AD11_RS31615;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_012767741.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 80820 82067 . + . ID=gene-AD11_RS13905;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AD11_RS13905;old_locus_tag=AD11_2193 NZ_JJLL01000133.1 Protein Homology CDS 80820 82067 . + 0 ID=cds-WP_000678988.1;Parent=gene-AD11_RS13905;Dbxref=GenBank:WP_000678988.1;Name=WP_000678988.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416578.2;locus_tag=AD11_RS13905;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_000678988.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 82067 85189 . + . ID=gene-AD11_RS13910;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AD11_RS13910;old_locus_tag=AD11_2194 NZ_JJLL01000133.1 Protein Homology CDS 82067 85189 . + 0 ID=cds-WP_001197907.1;Parent=gene-AD11_RS13910;Dbxref=GenBank:WP_001197907.1;Name=WP_001197907.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416579.1;locus_tag=AD11_RS13910;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197907.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 85190 88267 . + . ID=gene-AD11_RS13915;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AD11_RS13915;old_locus_tag=AD11_2195 NZ_JJLL01000133.1 Protein Homology CDS 85190 88267 . + 0 ID=cds-WP_000667585.1;Parent=gene-AD11_RS13915;Dbxref=GenBank:WP_000667585.1;Name=WP_000667585.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AD11_RS13915;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_000667585.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 88268 89683 . + . ID=gene-AD11_RS13920;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AD11_RS13920;old_locus_tag=AD11_2196 NZ_JJLL01000133.1 Protein Homology CDS 88268 89683 . + 0 ID=cds-WP_000130837.1;Parent=gene-AD11_RS13920;Dbxref=GenBank:WP_000130837.1;Name=WP_000130837.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416581.1;locus_tag=AD11_RS13920;product=MFS transporter;protein_id=WP_000130837.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 89680 91083 . + . ID=gene-AD11_RS13925;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AD11_RS13925;old_locus_tag=AD11_2197 NZ_JJLL01000133.1 Protein Homology CDS 89680 91083 . + 0 ID=cds-WP_000675150.1;Parent=gene-AD11_RS13925;Dbxref=GenBank:WP_000675150.1;Name=WP_000675150.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416582.1;locus_tag=AD11_RS13925;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000675150.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 91080 91802 . + . ID=gene-AD11_RS13930;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AD11_RS13930;old_locus_tag=AD11_2198 NZ_JJLL01000133.1 Protein Homology CDS 91080 91802 . + 0 ID=cds-WP_000137877.1;Parent=gene-AD11_RS13930;Dbxref=GenBank:WP_000137877.1;Name=WP_000137877.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AD11_RS13930;product=two-component system response regulator BaeR;protein_id=WP_000137877.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 91993 92325 . + . ID=gene-AD11_RS13935;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AD11_RS13935;old_locus_tag=AD11_2200 NZ_JJLL01000133.1 Protein Homology CDS 91993 92325 . + 0 ID=cds-WP_000929408.1;Parent=gene-AD11_RS13935;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AD11_RS13935;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 92472 93833 . + . ID=gene-AD11_RS13940;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AD11_RS13940;old_locus_tag=AD11_2201 NZ_JJLL01000133.1 Protein Homology CDS 92472 93833 . + 0 ID=cds-WP_000476014.1;Parent=gene-AD11_RS13940;Dbxref=GenBank:WP_000476014.1;Name=WP_000476014.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=AD11_RS13940;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476014.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 94164 94481 . - . ID=gene-AD11_RS13950;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=AD11_RS13950;old_locus_tag=AD11_2202 NZ_JJLL01000133.1 Protein Homology CDS 94164 94481 . - 0 ID=cds-WP_001318299.1;Parent=gene-AD11_RS13950;Dbxref=GenBank:WP_001318299.1;Name=WP_001318299.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416589.2;locus_tag=AD11_RS13950;product=protein YegR;protein_id=WP_001318299.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 94887 95786 . + . ID=gene-AD11_RS13955;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AD11_RS13955;old_locus_tag=AD11_2203 NZ_JJLL01000133.1 Protein Homology CDS 94887 95786 . + 0 ID=cds-WP_000807356.1;Parent=gene-AD11_RS13955;Dbxref=GenBank:WP_000807356.1;Name=WP_000807356.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416590.1;locus_tag=AD11_RS13955;product=lipid kinase YegS;protein_id=WP_000807356.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 95868 96641 . - . ID=gene-AD11_RS13960;Name=AD11_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13960;old_locus_tag=AD11_2204 NZ_JJLL01000133.1 Protein Homology CDS 95868 96641 . - 0 ID=cds-WP_001295426.1;Parent=gene-AD11_RS13960;Dbxref=GenBank:WP_001295426.1;Name=WP_001295426.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083894.1;locus_tag=AD11_RS13960;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001295426.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 96747 97787 . - . ID=gene-AD11_RS13965;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=AD11_RS13965;old_locus_tag=AD11_2205 NZ_JJLL01000133.1 Protein Homology CDS 96747 97787 . - 0 ID=cds-WP_000844219.1;Parent=gene-AD11_RS13965;Dbxref=GenBank:WP_000844219.1;Name=WP_000844219.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AD11_RS13965;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844219.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 97835 99190 . - . ID=gene-AD11_RS13970;Name=AD11_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS13970;old_locus_tag=AD11_2206 NZ_JJLL01000133.1 Protein Homology CDS 97835 99190 . - 0 ID=cds-WP_000490679.1;Parent=gene-AD11_RS13970;Dbxref=GenBank:WP_000490679.1;Name=WP_000490679.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AD11_RS13970;product=PTS galactitol transporter subunit IIC;protein_id=WP_000490679.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 99194 99478 . - . ID=gene-AD11_RS13975;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AD11_RS13975;old_locus_tag=AD11_2207 NZ_JJLL01000133.1 Protein Homology CDS 99194 99478 . - 0 ID=cds-WP_000823272.1;Parent=gene-AD11_RS13975;Dbxref=GenBank:WP_000823272.1;Name=WP_000823272.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416596.1;locus_tag=AD11_RS13975;product=PTS galactitol transporter subunit IIB;protein_id=WP_000823272.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 99509 99961 . - . ID=gene-AD11_RS13980;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AD11_RS13980;old_locus_tag=AD11_2208 NZ_JJLL01000133.1 Protein Homology CDS 99509 99961 . - 0 ID=cds-WP_000182914.1;Parent=gene-AD11_RS13980;Dbxref=GenBank:WP_000182914.1;Name=WP_000182914.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310924.1;locus_tag=AD11_RS13980;product=PTS galactitol transporter subunit IIA;protein_id=WP_000182914.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 99971 101233 . - . ID=gene-AD11_RS13985;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=AD11_RS13985;old_locus_tag=AD11_2209 NZ_JJLL01000133.1 Protein Homology CDS 99971 101233 . - 0 ID=cds-WP_000853898.1;Parent=gene-AD11_RS13985;Dbxref=GenBank:WP_000853898.1;Name=WP_000853898.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416598.1;locus_tag=AD11_RS13985;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_000853898.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 101262 102116 . - . ID=gene-AD11_RS13990;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=AD11_RS13990;old_locus_tag=AD11_2210 NZ_JJLL01000133.1 Protein Homology CDS 101262 102116 . - 0 ID=cds-WP_021556958.1;Parent=gene-AD11_RS13990;Dbxref=GenBank:WP_021556958.1;Name=WP_021556958.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=AD11_RS13990;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_021556958.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 102425 103477 . - . ID=gene-AD11_RS13995;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AD11_RS13995;old_locus_tag=AD11_2211 NZ_JJLL01000133.1 Protein Homology CDS 102425 103477 . - 0 ID=cds-WP_000129551.1;Parent=gene-AD11_RS13995;Dbxref=GenBank:WP_000129551.1;Name=WP_000129551.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AD11_RS13995;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 103734 105011 . + . ID=gene-AD11_RS14000;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AD11_RS14000;old_locus_tag=AD11_2212 NZ_JJLL01000133.1 Protein Homology CDS 103734 105011 . + 0 ID=cds-WP_000858498.1;Parent=gene-AD11_RS14000;Dbxref=GenBank:WP_000858498.1;Name=WP_000858498.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;gene=yegT;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AD11_RS14000;product=nucleoside permease;protein_id=WP_000858498.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 105008 106012 . + . ID=gene-AD11_RS14005;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AD11_RS14005;old_locus_tag=AD11_2213 NZ_JJLL01000133.1 Protein Homology CDS 105008 106012 . + 0 ID=cds-WP_000846217.1;Parent=gene-AD11_RS14005;Dbxref=GenBank:WP_000846217.1;Name=WP_000846217.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AD11_RS14005;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846217.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 106009 106974 . + . ID=gene-AD11_RS14010;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AD11_RS14010;old_locus_tag=AD11_2214 NZ_JJLL01000133.1 Protein Homology CDS 106009 106974 . + 0 ID=cds-WP_000011950.1;Parent=gene-AD11_RS14010;Dbxref=GenBank:WP_000011950.1;Name=WP_000011950.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707986.1;locus_tag=AD11_RS14010;product=carbohydrate kinase family protein;protein_id=WP_000011950.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 106948 107694 . - . ID=gene-AD11_RS14015;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AD11_RS14015;old_locus_tag=AD11_2215 NZ_JJLL01000133.1 Protein Homology CDS 106948 107694 . - 0 ID=cds-WP_000434038.1;Parent=gene-AD11_RS14015;Dbxref=GenBank:WP_000434038.1;Name=WP_000434038.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AD11_RS14015;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 107746 108564 . - . ID=gene-AD11_RS14020;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=protein_coding;locus_tag=AD11_RS14020;old_locus_tag=AD11_2216 NZ_JJLL01000133.1 Protein Homology CDS 107746 108564 . - 0 ID=cds-WP_001373513.1;Parent=gene-AD11_RS14020;Dbxref=GenBank:WP_001373513.1;Name=WP_001373513.1;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AD11_RS14020;product=glycoside hydrolase family 25 protein;protein_id=WP_001373513.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 108629 109429 . - . ID=gene-AD11_RS14025;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AD11_RS14025;old_locus_tag=AD11_2217 NZ_JJLL01000133.1 Protein Homology CDS 108629 109429 . - 0 ID=cds-WP_000822274.1;Parent=gene-AD11_RS14025;Dbxref=GenBank:WP_000822274.1;Name=WP_000822274.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AD11_RS14025;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822274.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 109426 110214 . - . ID=gene-AD11_RS14030;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AD11_RS14030;old_locus_tag=AD11_2218 NZ_JJLL01000133.1 Protein Homology CDS 109426 110214 . - 0 ID=cds-WP_001195638.1;Parent=gene-AD11_RS14030;Dbxref=GenBank:WP_001195638.1;Name=WP_001195638.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707990.1;locus_tag=AD11_RS14030;product=hydroxyethylthiazole kinase;protein_id=WP_001195638.1;transl_table=11 NZ_JJLL01000133.1 cmsearch riboswitch 110249 110345 . - . ID=id-NZ_JJLL01000133.1:110249..110345;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLL01000133.1 RefSeq gene 110437 110709 . - . ID=gene-AD11_RS14035;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AD11_RS14035;old_locus_tag=AD11_2219 NZ_JJLL01000133.1 Protein Homology CDS 110437 110709 . - 0 ID=cds-WP_000019944.1;Parent=gene-AD11_RS14035;Dbxref=GenBank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AD11_RS14035;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 110830 111654 . + . ID=gene-AD11_RS14040;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AD11_RS14040;old_locus_tag=AD11_2220 NZ_JJLL01000133.1 Protein Homology CDS 110830 111654 . + 0 ID=cds-WP_000134591.1;Parent=gene-AD11_RS14040;Dbxref=GenBank:WP_000134591.1;Name=WP_000134591.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AD11_RS14040;product=nickel/cobalt efflux protein RcnA;protein_id=WP_000134591.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 111873 112211 . + . ID=gene-AD11_RS14045;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AD11_RS14045;old_locus_tag=AD11_2221 NZ_JJLL01000133.1 Protein Homology CDS 111873 112211 . + 0 ID=cds-WP_000153067.1;Parent=gene-AD11_RS14045;Dbxref=GenBank:WP_000153067.1;Name=WP_000153067.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416610.4;locus_tag=AD11_RS14045;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153067.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 112293 113327 . - . ID=gene-AD11_RS14050;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;locus_tag=AD11_RS14050;old_locus_tag=AD11_2222 NZ_JJLL01000133.1 Protein Homology CDS 112293 113327 . - 0 ID=cds-WP_000405694.1;Parent=gene-AD11_RS14050;Dbxref=GenBank:WP_000405694.1;Name=WP_000405694.1;gbkey=CDS;gene=yehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AD11_RS14050;product=putative fimbrial-like adhesin protein;protein_id=WP_000405694.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 113343 115823 . - . ID=gene-AD11_RS14055;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=AD11_RS14055;old_locus_tag=AD11_2223 NZ_JJLL01000133.1 Protein Homology CDS 113343 115823 . - 0 ID=cds-WP_000945455.1;Parent=gene-AD11_RS14055;Dbxref=GenBank:WP_000945455.1;Name=WP_000945455.1;gbkey=CDS;gene=yehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AD11_RS14055;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_000945455.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 115839 116513 . - . ID=gene-AD11_RS14060;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=AD11_RS14060;old_locus_tag=AD11_2224 NZ_JJLL01000133.1 Protein Homology CDS 115839 116513 . - 0 ID=cds-WP_000677401.1;Parent=gene-AD11_RS14060;Dbxref=GenBank:WP_000677401.1;Name=WP_000677401.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AD11_RS14060;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677401.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 116593 117135 . - . ID=gene-AD11_RS14065;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=AD11_RS14065;old_locus_tag=AD11_2225 NZ_JJLL01000133.1 Protein Homology CDS 116593 117135 . - 0 ID=cds-WP_000830468.1;Parent=gene-AD11_RS14065;Dbxref=GenBank:WP_000830468.1;Name=WP_000830468.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707997.1;locus_tag=AD11_RS14065;product=fimbrial protein;protein_id=WP_000830468.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 117428 117709 . - . ID=gene-AD11_RS14075;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=AD11_RS14075 NZ_JJLL01000133.1 Protein Homology CDS 117428 117709 . - 0 ID=cds-WP_001324851.1;Parent=gene-AD11_RS14075;Dbxref=GenBank:WP_001324851.1;Name=WP_001324851.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416615.1;locus_tag=AD11_RS14075;product=YehE family protein;protein_id=WP_001324851.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 117972 119081 . - . ID=gene-AD11_RS14080;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AD11_RS14080;old_locus_tag=AD11_2227 NZ_JJLL01000133.1 Protein Homology CDS 117972 119081 . - 0 ID=cds-WP_001005448.1;Parent=gene-AD11_RS14080;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AD11_RS14080;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 119213 121246 . + . ID=gene-AD11_RS14085;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AD11_RS14085;old_locus_tag=AD11_2228 NZ_JJLL01000133.1 Protein Homology CDS 119213 121246 . + 0 ID=cds-WP_001338997.1;Parent=gene-AD11_RS14085;Dbxref=GenBank:WP_001338997.1;Name=WP_001338997.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=AD11_RS14085;product=methionine--tRNA ligase;protein_id=WP_001338997.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 121387 125181 . + . ID=gene-AD11_RS14090;Name=AD11_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14090;old_locus_tag=AD11_2229 NZ_JJLL01000133.1 Protein Homology CDS 121387 125181 . + 0 ID=cds-WP_001215619.1;Parent=gene-AD11_RS14090;Dbxref=GenBank:WP_001215619.1;Name=WP_001215619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AD11_RS14090;product=DUF4132 domain-containing protein;protein_id=WP_001215619.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 125191 128823 . + . ID=gene-AD11_RS14095;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=protein_coding;locus_tag=AD11_RS14095;old_locus_tag=AD11_2230 NZ_JJLL01000133.1 Protein Homology CDS 125191 128823 . + 0 ID=cds-WP_033865612.1;Parent=gene-AD11_RS14095;Dbxref=GenBank:WP_033865612.1;Name=WP_033865612.1;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AD11_RS14095;product=DUF4132 domain-containing protein YehI;protein_id=WP_033865612.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 128884 129201 . + . ID=gene-AD11_RS14100;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;locus_tag=AD11_RS14100 NZ_JJLL01000133.1 Protein Homology CDS 128884 129201 . + 0 ID=cds-WP_000636925.1;Parent=gene-AD11_RS14100;Dbxref=GenBank:WP_000636925.1;Name=WP_000636925.1;gbkey=CDS;gene=yehK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588459.1;locus_tag=AD11_RS14100;product=protein YehK;protein_id=WP_000636925.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 129508 130596 . + . ID=gene-AD11_RS14105;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=AD11_RS14105;old_locus_tag=AD11_2231 NZ_JJLL01000133.1 Protein Homology CDS 129508 130596 . + 0 ID=cds-WP_001300974.1;Parent=gene-AD11_RS14105;Dbxref=GenBank:WP_001300974.1;Name=WP_001300974.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yehL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416623.2;locus_tag=AD11_RS14105;product=ATP-binding protein;protein_id=WP_001300974.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 130607 132886 . + . ID=gene-AD11_RS14110;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;locus_tag=AD11_RS14110;old_locus_tag=AD11_2232 NZ_JJLL01000133.1 Protein Homology CDS 130607 132886 . + 0 ID=cds-WP_001294387.1;Parent=gene-AD11_RS14110;Dbxref=GenBank:WP_001294387.1;Name=WP_001294387.1;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AD11_RS14110;product=DUF5682 family protein;protein_id=WP_001294387.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 132879 134015 . + . ID=gene-AD11_RS14115;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;locus_tag=AD11_RS14115;old_locus_tag=AD11_2233 NZ_JJLL01000133.1 Protein Homology CDS 132879 134015 . + 0 ID=cds-WP_001373529.1;Parent=gene-AD11_RS14115;Dbxref=GenBank:WP_001373529.1;Name=WP_001373529.1;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AD11_RS14115;product=vWA domain-containing protein;protein_id=WP_001373529.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 134012 136012 . + . ID=gene-AD11_RS14120;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=AD11_RS14120;old_locus_tag=AD11_2234 NZ_JJLL01000133.1 Protein Homology CDS 134012 136012 . + 0 ID=cds-WP_032176444.1;Parent=gene-AD11_RS14120;Dbxref=GenBank:WP_032176444.1;Name=WP_032176444.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AD11_RS14120;product=SWIM zinc finger family protein;protein_id=WP_032176444.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 136137 136598 . + . ID=gene-AD11_RS14125;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AD11_RS14125;old_locus_tag=AD11_2235 NZ_JJLL01000133.1 Protein Homology CDS 136137 136598 . + 0 ID=cds-WP_001373589.1;Parent=gene-AD11_RS14125;Dbxref=GenBank:WP_001373589.1;Name=WP_001373589.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AD11_RS14125;product=YehR family lipoprotein;protein_id=WP_001373589.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 136639 137109 . - . ID=gene-AD11_RS14130;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AD11_RS14130;old_locus_tag=AD11_2236 NZ_JJLL01000133.1 Protein Homology CDS 136639 137109 . - 0 ID=cds-WP_001295430.1;Parent=gene-AD11_RS14130;Dbxref=GenBank:WP_001295430.1;Name=WP_001295430.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310962.1;locus_tag=AD11_RS14130;product=DUF1456 family protein;protein_id=WP_001295430.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 137156 137875 . - . ID=gene-AD11_RS14135;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AD11_RS14135;old_locus_tag=AD11_2237 NZ_JJLL01000133.1 Protein Homology CDS 137156 137875 . - 0 ID=cds-WP_000598641.1;Parent=gene-AD11_RS14135;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AD11_RS14135;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 137872 139557 . - . ID=gene-AD11_RS14140;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AD11_RS14140;old_locus_tag=AD11_2238 NZ_JJLL01000133.1 Protein Homology CDS 137872 139557 . - 0 ID=cds-WP_001295431.1;Parent=gene-AD11_RS14140;Dbxref=GenBank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AD11_RS14140;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11 NZ_JJLL01000133.1 RefSeq pseudogene 139779 139844 . + . ID=gene-AD11_RS32605;Name=AD11_RS32605;end_range=139844,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32605;partial=true;pseudo=true NZ_JJLL01000133.1 Protein Homology CDS 139779 139844 . + 0 ID=cds-AD11_RS32605;Parent=gene-AD11_RS32605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=139844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AD11_RS32605;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 140082 140330 . + . ID=gene-AD11_RS14145;Name=AD11_RS14145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14145;old_locus_tag=AD11_2239 NZ_JJLL01000133.1 Protein Homology CDS 140082 140330 . + 0 ID=cds-WP_016232182.1-2;Parent=gene-AD11_RS14145;Dbxref=GenBank:WP_016232182.1;Name=WP_016232182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238123.1;locus_tag=AD11_RS14145;product=DinI-like family protein;protein_id=WP_016232182.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 140367 140540 . - . ID=gene-AD11_RS32085;Name=AD11_RS32085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32085;old_locus_tag=AD11_2240 NZ_JJLL01000133.1 Protein Homology CDS 140367 140540 . - 0 ID=cds-WP_187439460.1;Parent=gene-AD11_RS32085;Dbxref=GenBank:WP_187439460.1;Name=WP_187439460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232183.1;locus_tag=AD11_RS32085;product=hypothetical protein;protein_id=WP_187439460.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 140545 141018 . - . ID=gene-AD11_RS14150;Name=AD11_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14150;old_locus_tag=AD11_2241 NZ_JJLL01000133.1 Protein Homology CDS 140545 141018 . - 0 ID=cds-WP_032211005.1;Parent=gene-AD11_RS14150;Dbxref=GenBank:WP_032211005.1;Name=WP_032211005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232184.1;locus_tag=AD11_RS14150;product=hypothetical protein;protein_id=WP_032211005.1;transl_table=11 NZ_JJLL01000133.1 RefSeq gene 141109 142221 . - . ID=gene-AD11_RS14155;Name=AD11_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14155;old_locus_tag=AD11_2242 NZ_JJLL01000133.1 Protein Homology CDS 141109 142221 . - 0 ID=cds-WP_033865461.1;Parent=gene-AD11_RS14155;Dbxref=GenBank:WP_033865461.1;Name=WP_033865461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001537314.1;locus_tag=AD11_RS14155;product=YadA C-terminal domain-containing protein;protein_id=WP_033865461.1;transl_table=11 ##sequence-region NZ_JJLL01000134.1 1 684733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000134.1 RefSeq region 1 684733 . + . ID=NZ_JJLL01000134.1:1..684733;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000134.1 RefSeq pseudogene 28 724 . + . ID=gene-AD11_RS14175;Name=AD11_RS14175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS14175;old_locus_tag=AD11_2243;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 28 724 . + 0 ID=cds-AD11_RS14175;Parent=gene-AD11_RS14175;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS14175;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 1099 2232 . + . ID=gene-AD11_RS14180;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AD11_RS14180;old_locus_tag=AD11_2244 NZ_JJLL01000134.1 Protein Homology CDS 1099 2232 . + 0 ID=cds-WP_000837924.1;Parent=gene-AD11_RS14180;Dbxref=GenBank:WP_000837924.1;Name=WP_000837924.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AD11_RS14180;product=porin OmpN;protein_id=WP_000837924.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 2373 2807 . + . ID=gene-AD11_RS14185;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AD11_RS14185;old_locus_tag=AD11_2245 NZ_JJLL01000134.1 Protein Homology CDS 2373 2807 . + 0 ID=cds-WP_001295593.1;Parent=gene-AD11_RS14185;Dbxref=GenBank:WP_001295593.1;Name=WP_001295593.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310024.2;locus_tag=AD11_RS14185;product=universal stress protein UspF;protein_id=WP_001295593.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 3357 3491 . - . ID=gene-AD11_RS29365;Name=AD11_RS29365;end_range=3491,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29365;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 3357 3491 . - 0 ID=cds-AD11_RS29365;Parent=gene-AD11_RS29365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885624.1;locus_tag=AD11_RS29365;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 3540 4007 . - . ID=gene-AD11_RS33190;Name=AD11_RS33190;end_range=4007,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33190;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 3540 4007 . - 0 ID=cds-AD11_RS33190;Parent=gene-AD11_RS33190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019062,GO:0046718,GO:0098024;end_range=4007,.;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535878.1;locus_tag=AD11_RS33190;partial=true;product=tail fiber domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 5046 6029 . - . ID=gene-AD11_RS33195;Name=AD11_RS33195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33195;partial=true;pseudo=true;start_range=.,5046 NZ_JJLL01000134.1 Protein Homology CDS 5046 6029 . - 0 ID=cds-AD11_RS33195;Parent=gene-AD11_RS33195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415890.2;locus_tag=AD11_RS33195;partial=true;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;start_range=.,5046;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 6094 6693 . - . ID=gene-AD11_RS14195;Name=AD11_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14195;old_locus_tag=AD11_2247 NZ_JJLL01000134.1 Protein Homology CDS 6094 6693 . - 0 ID=cds-WP_001233114.1;Parent=gene-AD11_RS14195;Dbxref=GenBank:WP_001233114.1;Name=WP_001233114.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308870.1;locus_tag=AD11_RS14195;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001233114.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 6761 10240 . - . ID=gene-AD11_RS14200;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AD11_RS14200;old_locus_tag=AD11_2248 NZ_JJLL01000134.1 Protein Homology CDS 6761 10240 . - 0 ID=cds-WP_033865443.1;Parent=gene-AD11_RS14200;Dbxref=GenBank:WP_033865443.1;Name=WP_033865443.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706646.1;locus_tag=AD11_RS14200;product=phage attachment tail tip protein J;protein_id=WP_033865443.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 10301 10903 . - . ID=gene-AD11_RS14205;Name=AD11_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14205;old_locus_tag=AD11_2249 NZ_JJLL01000134.1 Protein Homology CDS 10301 10903 . - 0 ID=cds-WP_051577946.1;Parent=gene-AD11_RS14205;Dbxref=GenBank:WP_051577946.1;Name=WP_051577946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000090847.1;locus_tag=AD11_RS14205;product=tail assembly protein;protein_id=WP_051577946.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 10840 11583 . - . ID=gene-AD11_RS14210;Name=AD11_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14210;old_locus_tag=AD11_2250 NZ_JJLL01000134.1 Protein Homology CDS 10840 11583 . - 0 ID=cds-WP_033865444.1;Parent=gene-AD11_RS14210;Dbxref=GenBank:WP_033865444.1;Name=WP_033865444.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AD11_RS14210;product=C40 family peptidase;protein_id=WP_033865444.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 11589 12287 . - . ID=gene-AD11_RS14215;Name=AD11_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14215;old_locus_tag=AD11_2251 NZ_JJLL01000134.1 Protein Homology CDS 11589 12287 . - 0 ID=cds-WP_033865445.1;Parent=gene-AD11_RS14215;Dbxref=GenBank:WP_033865445.1;Name=WP_033865445.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309672.1;locus_tag=AD11_RS14215;product=phage minor tail protein L;protein_id=WP_033865445.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 12287 12625 . - . ID=gene-AD11_RS14220;Name=AD11_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14220;old_locus_tag=AD11_2252 NZ_JJLL01000134.1 Protein Homology CDS 12287 12625 . - 0 ID=cds-WP_033865446.1;Parent=gene-AD11_RS14220;Dbxref=GenBank:WP_033865446.1;Name=WP_033865446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024053.1;locus_tag=AD11_RS14220;product=phage tail protein;protein_id=WP_033865446.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 12618 15851 . - . ID=gene-AD11_RS14225;Name=AD11_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14225;old_locus_tag=AD11_2253 NZ_JJLL01000134.1 Protein Homology CDS 12618 15851 . - 0 ID=cds-WP_033866456.1;Parent=gene-AD11_RS14225;Dbxref=GenBank:WP_033866456.1;Name=WP_033866456.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231723.1;locus_tag=AD11_RS14225;product=phage tail tape measure protein;protein_id=WP_033866456.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 16325 16684 . - . ID=gene-AD11_RS14235;Name=ydaY;gbkey=Gene;gene=ydaY;gene_biotype=protein_coding;locus_tag=AD11_RS14235;old_locus_tag=AD11_2255 NZ_JJLL01000134.1 Protein Homology CDS 16325 16684 . - 0 ID=cds-WP_012565075.1;Parent=gene-AD11_RS14235;Dbxref=GenBank:WP_012565075.1;Name=WP_012565075.1;gbkey=CDS;gene=ydaY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518777.1;locus_tag=AD11_RS14235;product=protein YdaY;protein_id=WP_012565075.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 16835 17797 . - . ID=gene-AD11_RS14240;Name=AD11_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14240;old_locus_tag=AD11_2256 NZ_JJLL01000134.1 Protein Homology CDS 16835 17797 . - 0 ID=cds-WP_000094292.1;Parent=gene-AD11_RS14240;Dbxref=GenBank:WP_000094292.1;Name=WP_000094292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233030.1;locus_tag=AD11_RS14240;product=phage tail tube protein;protein_id=WP_000094292.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 17824 18216 . - . ID=gene-AD11_RS14245;Name=AD11_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14245;old_locus_tag=AD11_2257 NZ_JJLL01000134.1 Protein Homology CDS 17824 18216 . - 0 ID=cds-WP_000144678.1;Parent=gene-AD11_RS14245;Dbxref=GenBank:WP_000144678.1;Name=WP_000144678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121013.1;locus_tag=AD11_RS14245;product=phage tail terminator-like protein;protein_id=WP_000144678.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 18213 18593 . - . ID=gene-AD11_RS14250;Name=AD11_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14250;old_locus_tag=AD11_2258 NZ_JJLL01000134.1 Protein Homology CDS 18213 18593 . - 0 ID=cds-WP_033865388.1;Parent=gene-AD11_RS14250;Dbxref=GenBank:WP_033865388.1;Name=WP_033865388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029817.1;locus_tag=AD11_RS14250;product=hypothetical protein;protein_id=WP_033865388.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 18594 18977 . - . ID=gene-AD11_RS14255;Name=AD11_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14255;old_locus_tag=AD11_2259 NZ_JJLL01000134.1 Protein Homology CDS 18594 18977 . - 0 ID=cds-WP_000524259.1;Parent=gene-AD11_RS14255;Dbxref=GenBank:WP_000524259.1;Name=WP_000524259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231725.1;locus_tag=AD11_RS14255;product=hypothetical protein;protein_id=WP_000524259.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 18977 19372 . - . ID=gene-AD11_RS14260;Name=AD11_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14260;old_locus_tag=AD11_2260 NZ_JJLL01000134.1 Protein Homology CDS 18977 19372 . - 0 ID=cds-WP_021552292.1;Parent=gene-AD11_RS14260;Dbxref=GenBank:WP_021552292.1;Name=WP_021552292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634213.1;locus_tag=AD11_RS14260;product=hypothetical protein;protein_id=WP_021552292.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 19376 19552 . - . ID=gene-AD11_RS32090;Name=AD11_RS32090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32090;old_locus_tag=AD11_2261 NZ_JJLL01000134.1 Protein Homology CDS 19376 19552 . - 0 ID=cds-WP_000908084.1;Parent=gene-AD11_RS32090;Dbxref=GenBank:WP_000908084.1;Name=WP_000908084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121546.1;locus_tag=AD11_RS32090;product=hypothetical protein;protein_id=WP_000908084.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 19595 20734 . - . ID=gene-AD11_RS14265;Name=AD11_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14265;old_locus_tag=AD11_2262 NZ_JJLL01000134.1 Protein Homology CDS 19595 20734 . - 0 ID=cds-WP_000918483.1;Parent=gene-AD11_RS14265;Dbxref=GenBank:WP_000918483.1;Name=WP_000918483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918482.1;locus_tag=AD11_RS14265;product=P22 phage major capsid protein family protein;protein_id=WP_000918483.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 20833 21597 . - . ID=gene-AD11_RS14270;Name=AD11_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14270;old_locus_tag=AD11_2263 NZ_JJLL01000134.1 Protein Homology CDS 20833 21597 . - 0 ID=cds-WP_021552291.1;Parent=gene-AD11_RS14270;Dbxref=GenBank:WP_021552291.1;Name=WP_021552291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770040.1;locus_tag=AD11_RS14270;product=DUF6651 domain-containing protein;protein_id=WP_021552291.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 21702 22814 . - . ID=gene-AD11_RS14275;Name=AD11_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14275;old_locus_tag=AD11_2264 NZ_JJLL01000134.1 Protein Homology CDS 21702 22814 . - 0 ID=cds-WP_024181861.1;Parent=gene-AD11_RS14275;Dbxref=GenBank:WP_024181861.1;Name=WP_024181861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001645719.1;locus_tag=AD11_RS14275;product=phage minor head protein;protein_id=WP_024181861.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 22798 24204 . - . ID=gene-AD11_RS14280;Name=AD11_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14280;old_locus_tag=AD11_2265 NZ_JJLL01000134.1 Protein Homology CDS 22798 24204 . - 0 ID=cds-WP_000763706.1;Parent=gene-AD11_RS14280;Dbxref=GenBank:WP_000763706.1;Name=WP_000763706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469190.1;locus_tag=AD11_RS14280;product=DUF4055 domain-containing protein;protein_id=WP_000763706.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 24207 25508 . - . ID=gene-AD11_RS14285;Name=AD11_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14285;old_locus_tag=AD11_2266 NZ_JJLL01000134.1 Protein Homology CDS 24207 25508 . - 0 ID=cds-WP_000625349.1;Parent=gene-AD11_RS14285;Dbxref=GenBank:WP_000625349.1;Name=WP_000625349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625349.1;locus_tag=AD11_RS14285;product=terminase large subunit domain-containing protein;protein_id=WP_000625349.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 25489 26583 . - . ID=gene-AD11_RS14290;Name=AD11_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14290;old_locus_tag=AD11_2267 NZ_JJLL01000134.1 Protein Homology CDS 25489 26583 . - 0 ID=cds-WP_033865387.1;Parent=gene-AD11_RS14290;Dbxref=GenBank:WP_033865387.1;Name=WP_033865387.1;Ontology_term=GO:0051276;gbkey=CDS;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089437.1;locus_tag=AD11_RS14290;product=terminase small subunit;protein_id=WP_033865387.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 26587 26796 . - . ID=gene-AD11_RS14295;Name=AD11_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14295;old_locus_tag=AD11_2268 NZ_JJLL01000134.1 Protein Homology CDS 26587 26796 . - 0 ID=cds-WP_000126788.1;Parent=gene-AD11_RS14295;Dbxref=GenBank:WP_000126788.1;Name=WP_000126788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126789.1;locus_tag=AD11_RS14295;product=hypothetical protein;protein_id=WP_000126788.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 26774 27706 . - . ID=gene-AD11_RS14300;Name=AD11_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14300;old_locus_tag=AD11_2269 NZ_JJLL01000134.1 Protein Homology CDS 26774 27706 . - 0 ID=cds-WP_001204031.1;Parent=gene-AD11_RS14300;Dbxref=GenBank:WP_001204031.1;Name=WP_001204031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204026.1;locus_tag=AD11_RS14300;product=hypothetical protein;protein_id=WP_001204031.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 27699 28490 . - . ID=gene-AD11_RS32895;Name=AD11_RS32895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32895;old_locus_tag=AD11_2270 NZ_JJLL01000134.1 Protein Homology CDS 27699 28490 . - 0 ID=cds-WP_016232661.1;Parent=gene-AD11_RS32895;Dbxref=GenBank:WP_016232661.1;Name=WP_016232661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415883.1;locus_tag=AD11_RS32895;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_016232661.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 28628 30085 . - . ID=gene-AD11_RS14310;Name=trkG;gbkey=Gene;gene=trkG;gene_biotype=protein_coding;locus_tag=AD11_RS14310;old_locus_tag=AD11_2271 NZ_JJLL01000134.1 Protein Homology CDS 28628 30085 . - 0 ID=cds-WP_001097895.1;Parent=gene-AD11_RS14310;Dbxref=GenBank:WP_001097895.1;Name=WP_001097895.1;gbkey=CDS;gene=trkG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415881.1;locus_tag=AD11_RS14310;product=Trk system potassium transporter TrkG;protein_id=WP_001097895.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 30223 30687 . - . ID=gene-AD11_RS33200;Name=AD11_RS33200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33200;old_locus_tag=AD11_2272 NZ_JJLL01000134.1 Protein Homology CDS 30223 30687 . - 0 ID=cds-WP_000092309.1;Parent=gene-AD11_RS33200;Dbxref=GenBank:WP_000092309.1;Name=WP_000092309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082741.1;locus_tag=AD11_RS33200;product=lysis protein;protein_id=WP_000092309.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 30684 31160 . - . ID=gene-AD11_RS14320;Name=AD11_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14320;old_locus_tag=AD11_2273 NZ_JJLL01000134.1 Protein Homology CDS 30684 31160 . - 0 ID=cds-WP_001194112.1;Parent=gene-AD11_RS14320;Dbxref=GenBank:WP_001194112.1;Name=WP_001194112.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309649.1;locus_tag=AD11_RS14320;product=glycoside hydrolase family 24 protein;protein_id=WP_001194112.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 31164 31505 . - . ID=gene-AD11_RS14325;Name=AD11_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14325;old_locus_tag=AD11_2274 NZ_JJLL01000134.1 Protein Homology CDS 31164 31505 . - 0 ID=cds-WP_000781775.1;Parent=gene-AD11_RS14325;Dbxref=GenBank:WP_000781775.1;Name=WP_000781775.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000781776.1;locus_tag=AD11_RS14325;product=phage holin%2C lambda family;protein_id=WP_000781775.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 31669 31884 . + . ID=gene-AD11_RS29375;Name=AD11_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS29375 NZ_JJLL01000134.1 GeneMarkS-2+ CDS 31669 31884 . + 0 ID=cds-WP_224482377.1;Parent=gene-AD11_RS29375;Dbxref=GenBank:WP_224482377.1;Name=WP_224482377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS29375;product=hypothetical protein;protein_id=WP_224482377.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 31853 32422 . - . ID=gene-AD11_RS14330;Name=AD11_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14330 NZ_JJLL01000134.1 Protein Homology CDS 31853 32422 . - 0 ID=cds-WP_001208722.1;Parent=gene-AD11_RS14330;Dbxref=GenBank:WP_001208722.1;Name=WP_001208722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523177.1;locus_tag=AD11_RS14330;product=hypothetical protein;protein_id=WP_001208722.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 32644 33186 . - . ID=gene-AD11_RS14335;Name=AD11_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14335;old_locus_tag=AD11_2276 NZ_JJLL01000134.1 Protein Homology CDS 32644 33186 . - 0 ID=cds-WP_000640144.1;Parent=gene-AD11_RS14335;Dbxref=GenBank:WP_000640144.1;Name=WP_000640144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001502553.1;locus_tag=AD11_RS14335;product=DUF1133 family protein;protein_id=WP_000640144.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 33183 33473 . - . ID=gene-AD11_RS14340;Name=AD11_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14340;old_locus_tag=AD11_2277 NZ_JJLL01000134.1 Protein Homology CDS 33183 33473 . - 0 ID=cds-WP_000228038.1;Parent=gene-AD11_RS14340;Dbxref=GenBank:WP_000228038.1;Name=WP_000228038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707251.1;locus_tag=AD11_RS14340;product=DUF1364 domain-containing protein;protein_id=WP_000228038.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 33473 34072 . - . ID=gene-AD11_RS14345;Name=AD11_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14345;old_locus_tag=AD11_2278 NZ_JJLL01000134.1 Protein Homology CDS 33473 34072 . - 0 ID=cds-WP_033865385.1;Parent=gene-AD11_RS14345;Dbxref=GenBank:WP_033865385.1;Name=WP_033865385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309983.1;locus_tag=AD11_RS14345;product=DUF1367 family protein;protein_id=WP_033865385.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 34538 34693 . - . ID=gene-AD11_RS14350;Name=AD11_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14350;old_locus_tag=AD11_2280 NZ_JJLL01000134.1 Protein Homology CDS 34538 34693 . - 0 ID=cds-WP_197732162.1;Parent=gene-AD11_RS14350;Dbxref=GenBank:WP_197732162.1;Name=WP_197732162.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AD11_RS14350;product=Hok/Gef family protein;protein_id=WP_197732162.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 34839 36668 . + . ID=gene-AD11_RS14355;Name=AD11_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14355;old_locus_tag=AD11_2281 NZ_JJLL01000134.1 Protein Homology CDS 34839 36668 . + 0 ID=cds-WP_000107696.1;Parent=gene-AD11_RS14355;Dbxref=GenBank:WP_000107696.1;Name=WP_000107696.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000107696.1;locus_tag=AD11_RS14355;product=ATP-dependent nuclease;protein_id=WP_000107696.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 36692 37732 . + . ID=gene-AD11_RS14360;Name=AD11_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14360;old_locus_tag=AD11_2282 NZ_JJLL01000134.1 Protein Homology CDS 36692 37732 . + 0 ID=cds-WP_000721512.1;Parent=gene-AD11_RS14360;Dbxref=GenBank:WP_000721512.1;Name=WP_000721512.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000721512.1;locus_tag=AD11_RS14360;product=DNA cytosine methyltransferase;protein_id=WP_000721512.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 37766 38197 . - . ID=gene-AD11_RS14365;Name=AD11_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14365;old_locus_tag=AD11_2283 NZ_JJLL01000134.1 Protein Homology CDS 37766 38197 . - 0 ID=cds-WP_001151113.1;Parent=gene-AD11_RS14365;Dbxref=GenBank:WP_001151113.1;Name=WP_001151113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151113.1;locus_tag=AD11_RS14365;product=DUF977 family protein;protein_id=WP_001151113.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 38213 38974 . - . ID=gene-AD11_RS14370;Name=AD11_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14370;old_locus_tag=AD11_2284 NZ_JJLL01000134.1 Protein Homology CDS 38213 38974 . - 0 ID=cds-WP_033865384.1;Parent=gene-AD11_RS14370;Dbxref=GenBank:WP_033865384.1;Name=WP_033865384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309973.2;locus_tag=AD11_RS14370;product=DUF1627 domain-containing protein;protein_id=WP_033865384.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 38997 39743 . - . ID=gene-AD11_RS14375;Name=ydaV;gbkey=Gene;gene=ydaV;gene_biotype=protein_coding;locus_tag=AD11_RS14375;old_locus_tag=AD11_2285 NZ_JJLL01000134.1 Protein Homology CDS 38997 39743 . - 0 ID=cds-WP_000788972.1;Parent=gene-AD11_RS14375;Dbxref=GenBank:WP_000788972.1;Name=WP_000788972.1;gbkey=CDS;gene=ydaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415878.1;locus_tag=AD11_RS14375;product=ATP-binding protein;protein_id=WP_000788972.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 39750 40538 . - . ID=gene-AD11_RS14380;Name=AD11_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14380;old_locus_tag=AD11_2286 NZ_JJLL01000134.1 Protein Homology CDS 39750 40538 . - 0 ID=cds-WP_001396581.1;Parent=gene-AD11_RS14380;Dbxref=GenBank:WP_001396581.1;Name=WP_001396581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309971.1;locus_tag=AD11_RS14380;product=hypothetical protein;protein_id=WP_001396581.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 40616 41038 . - . ID=gene-AD11_RS14385;Name=ydaT;gbkey=Gene;gene=ydaT;gene_biotype=protein_coding;locus_tag=AD11_RS14385;old_locus_tag=AD11_2287 NZ_JJLL01000134.1 Protein Homology CDS 40616 41038 . - 0 ID=cds-WP_000693803.1;Parent=gene-AD11_RS14385;Dbxref=GenBank:WP_000693803.1;Name=WP_000693803.1;gbkey=CDS;gene=ydaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309970.1;locus_tag=AD11_RS14385;product=toxin YdaT family protein;protein_id=WP_000693803.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 41035 41289 . - . ID=gene-AD11_RS14390;Name=AD11_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14390;old_locus_tag=AD11_2288 NZ_JJLL01000134.1 Protein Homology CDS 41035 41289 . - 0 ID=cds-WP_001072342.1;Parent=gene-AD11_RS14390;Dbxref=GenBank:WP_001072342.1;Name=WP_001072342.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309969.1;locus_tag=AD11_RS14390;product=helix-turn-helix transcriptional regulator;protein_id=WP_001072342.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 41369 41788 . + . ID=gene-AD11_RS27475;Name=AD11_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS27475;old_locus_tag=AD11_2289 NZ_JJLL01000134.1 Protein Homology CDS 41369 41788 . + 0 ID=cds-WP_000233319.1;Parent=gene-AD11_RS27475;Dbxref=GenBank:WP_000233319.1;Name=WP_000233319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309968.2;locus_tag=AD11_RS27475;product=helix-turn-helix domain-containing protein;protein_id=WP_000233319.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 42031 42210 . + . ID=gene-AD11_RS30805;Name=AD11_RS30805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS30805;old_locus_tag=AD11_2290 NZ_JJLL01000134.1 Protein Homology CDS 42031 42210 . + 0 ID=cds-WP_001326317.1;Parent=gene-AD11_RS30805;Dbxref=GenBank:WP_001326317.1;Name=WP_001326317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312794.1;locus_tag=AD11_RS30805;product=hypothetical protein;protein_id=WP_001326317.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 42221 42376 . + . ID=gene-AD11_RS27480;Name=ydaF;gbkey=Gene;gene=ydaF;gene_biotype=protein_coding;locus_tag=AD11_RS27480 NZ_JJLL01000134.1 Protein Homology CDS 42221 42376 . + 0 ID=cds-WP_001169151.1;Parent=gene-AD11_RS27480;Dbxref=GenBank:WP_001169151.1;Name=WP_001169151.1;gbkey=CDS;gene=ydaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309965.1;locus_tag=AD11_RS27480;product=YdaF family protein;protein_id=WP_001169151.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 42373 42861 . - . ID=gene-AD11_RS14400;Name=sieB;gbkey=Gene;gene=sieB;gene_biotype=protein_coding;locus_tag=AD11_RS14400 NZ_JJLL01000134.1 Protein Homology CDS 42373 42861 . - 0 ID=cds-WP_001312793.1;Parent=gene-AD11_RS14400;Dbxref=GenBank:WP_001312793.1;Name=WP_001312793.1;gbkey=CDS;gene=sieB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415870.4;locus_tag=AD11_RS14400;product=superinfection exclusion B family protein;protein_id=WP_001312793.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 43303 43524 . + . ID=gene-AD11_RS14405;Name=kilR;gbkey=Gene;gene=kilR;gene_biotype=protein_coding;locus_tag=AD11_RS14405;old_locus_tag=AD11_2292 NZ_JJLL01000134.1 Protein Homology CDS 43303 43524 . + 0 ID=cds-WP_000560223.1;Parent=gene-AD11_RS14405;Dbxref=GenBank:WP_000560223.1;Name=WP_000560223.1;gbkey=CDS;gene=kilR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309963.2;locus_tag=AD11_RS14405;product=killing protein KilR;protein_id=WP_000560223.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 43524 43694 . + . ID=gene-AD11_RS14410;Name=ydaE;gbkey=Gene;gene=ydaE;gene_biotype=protein_coding;locus_tag=AD11_RS14410;old_locus_tag=AD11_2293 NZ_JJLL01000134.1 Protein Homology CDS 43524 43694 . + 0 ID=cds-WP_001352098.1;Parent=gene-AD11_RS14410;Dbxref=GenBank:WP_001352098.1;Name=WP_001352098.1;gbkey=CDS;gene=ydaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588451.1;locus_tag=AD11_RS14410;product=YdaE family protein;protein_id=WP_001352098.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 43769 44044 . + . ID=gene-AD11_RS14415;Name=AD11_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14415;old_locus_tag=AD11_2294 NZ_JJLL01000134.1 Protein Homology CDS 43769 44044 . + 0 ID=cds-WP_001344816.1;Parent=gene-AD11_RS14415;Dbxref=GenBank:WP_001344816.1;Name=WP_001344816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309962.1;locus_tag=AD11_RS14415;product=hypothetical protein;protein_id=WP_001344816.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 44146 46746 . + . ID=gene-AD11_RS14420;Name=recE;gbkey=Gene;gene=recE;gene_biotype=protein_coding;locus_tag=AD11_RS14420;old_locus_tag=AD11_2295 NZ_JJLL01000134.1 Protein Homology CDS 44146 46746 . + 0 ID=cds-WP_033865382.1;Parent=gene-AD11_RS14420;Dbxref=GenBank:WP_033865382.1;Name=WP_033865382.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;gene=recE;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309961.1;locus_tag=AD11_RS14420;product=exodeoxyribonuclease VIII;protein_id=WP_033865382.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 46739 47548 . + . ID=gene-AD11_RS14425;Name=recT;gbkey=Gene;gene=recT;gene_biotype=protein_coding;locus_tag=AD11_RS14425;old_locus_tag=AD11_2296 NZ_JJLL01000134.1 Protein Homology CDS 46739 47548 . + 0 ID=cds-WP_000166313.1;Parent=gene-AD11_RS14425;Dbxref=GenBank:WP_000166313.1;Name=WP_000166313.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;gene=recT;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309960.1;locus_tag=AD11_RS14425;product=recombination protein RecT;protein_id=WP_000166313.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 47604 47798 . + . ID=gene-AD11_RS14430;Name=ralR;gbkey=Gene;gene=ralR;gene_biotype=protein_coding;locus_tag=AD11_RS14430 NZ_JJLL01000134.1 Protein Homology CDS 47604 47798 . + 0 ID=cds-WP_051577948.1;Parent=gene-AD11_RS14430;Dbxref=GenBank:WP_051577948.1;Name=WP_051577948.1;gbkey=CDS;gene=ralR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415864.1;locus_tag=AD11_RS14430;product=type I toxin-antitoxin system endodeoxyribonuclease toxin RalR;protein_id=WP_051577948.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 47791 47979 . + . ID=gene-AD11_RS14435;Name=AD11_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14435;old_locus_tag=AD11_2297 NZ_JJLL01000134.1 Protein Homology CDS 47791 47979 . + 0 ID=cds-WP_001302840.1;Parent=gene-AD11_RS14435;Dbxref=GenBank:WP_001302840.1;Name=WP_001302840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309958.1;locus_tag=AD11_RS14435;product=DUF1187 family protein;protein_id=WP_001302840.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 48079 48294 . + . ID=gene-AD11_RS14440;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=AD11_RS14440;old_locus_tag=AD11_2298 NZ_JJLL01000134.1 Protein Homology CDS 48079 48294 . + 0 ID=cds-WP_000079604.1;Parent=gene-AD11_RS14440;Dbxref=GenBank:WP_000079604.1;Name=WP_000079604.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309957.2;locus_tag=AD11_RS14440;product=excisionase XisR;protein_id=WP_000079604.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 48296 49531 . + . ID=gene-AD11_RS29390;Name=intR;gbkey=Gene;gene=intR;gene_biotype=protein_coding;locus_tag=AD11_RS29390 NZ_JJLL01000134.1 Protein Homology CDS 48296 49531 . + 0 ID=cds-WP_000040843.1;Parent=gene-AD11_RS29390;Dbxref=GenBank:WP_000040843.1;Name=WP_000040843.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=intR;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415861.1;locus_tag=AD11_RS29390;product=tyrosine-type recombinase/integrase;protein_id=WP_000040843.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 49583 50518 . + . ID=gene-AD11_RS14450;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AD11_RS14450;old_locus_tag=AD11_2300 NZ_JJLL01000134.1 Protein Homology CDS 49583 50518 . + 0 ID=cds-WP_001157407.1;Parent=gene-AD11_RS14450;Dbxref=GenBank:WP_001157407.1;Name=WP_001157407.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309955.1;locus_tag=AD11_RS14450;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001157407.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 50647 52020 . - . ID=gene-AD11_RS14455;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AD11_RS14455;old_locus_tag=AD11_2301 NZ_JJLL01000134.1 Protein Homology CDS 50647 52020 . - 0 ID=cds-WP_000123737.1;Parent=gene-AD11_RS14455;Dbxref=GenBank:WP_000123737.1;Name=WP_000123737.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415859.1;locus_tag=AD11_RS14455;product=ATP-dependent RNA helicase DbpA;protein_id=WP_000123737.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 52050 52223 . - . ID=gene-AD11_RS32900;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AD11_RS32900 NZ_JJLL01000134.1 Protein Homology CDS 52050 52223 . - 0 ID=cds-WP_001296046.1;Parent=gene-AD11_RS32900;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AD11_RS32900;product=protein YnaL;protein_id=WP_001296046.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 52498 53481 . - . ID=gene-AD11_RS14465;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AD11_RS14465;old_locus_tag=AD11_2302 NZ_JJLL01000134.1 Protein Homology CDS 52498 53481 . - 0 ID=cds-WP_000387388.1;Parent=gene-AD11_RS14465;Dbxref=GenBank:WP_000387388.1;Name=WP_000387388.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AD11_RS14465;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 53495 53542 . - . ID=gene-AD11_RS32630;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AD11_RS32630 NZ_JJLL01000134.1 Protein Homology CDS 53495 53542 . - 0 ID=cds-WP_211180494.1;Parent=gene-AD11_RS32630;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AD11_RS32630;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 53736 54968 . + . ID=gene-AD11_RS14470;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AD11_RS14470;old_locus_tag=AD11_2303 NZ_JJLL01000134.1 Protein Homology CDS 53736 54968 . + 0 ID=cds-WP_000628058.1;Parent=gene-AD11_RS14470;Dbxref=GenBank:WP_000628058.1;Name=WP_000628058.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415857.2;locus_tag=AD11_RS14470;product=diguanylate cyclase DgcM;protein_id=WP_000628058.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 54989 55552 . - . ID=gene-AD11_RS14475;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AD11_RS14475;old_locus_tag=AD11_2304 NZ_JJLL01000134.1 Protein Homology CDS 54989 55552 . - 0 ID=cds-WP_001046829.1;Parent=gene-AD11_RS14475;Dbxref=GenBank:WP_001046829.1;Name=WP_001046829.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415856.1;locus_tag=AD11_RS14475;product=DNA endonuclease SmrA;protein_id=WP_001046829.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 55882 56790 . - . ID=gene-AD11_RS14485;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=AD11_RS14485;old_locus_tag=AD11_2305 NZ_JJLL01000134.1 Protein Homology CDS 55882 56790 . - 0 ID=cds-WP_021559089.1;Parent=gene-AD11_RS14485;Dbxref=GenBank:WP_021559089.1;Name=WP_021559089.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AD11_RS14485;product=LysR family transcriptional regulator;protein_id=WP_021559089.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 56966 58276 . + . ID=gene-AD11_RS14490;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=protein_coding;locus_tag=AD11_RS14490;old_locus_tag=AD11_2306 NZ_JJLL01000134.1 Protein Homology CDS 56966 58276 . + 0 ID=cds-WP_032083638.1;Parent=gene-AD11_RS14490;Dbxref=GenBank:WP_032083638.1;Name=WP_032083638.1;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AD11_RS14490;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;protein_id=WP_032083638.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 58276 59721 . + . ID=gene-AD11_RS14495;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=AD11_RS14495;old_locus_tag=AD11_2307 NZ_JJLL01000134.1 Protein Homology CDS 58276 59721 . + 0 ID=cds-WP_001156412.1;Parent=gene-AD11_RS14495;Dbxref=GenBank:WP_001156412.1;Name=WP_001156412.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AD11_RS14495;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_001156412.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 59758 61284 . + . ID=gene-AD11_RS14505;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AD11_RS14505;old_locus_tag=AD11_2308 NZ_JJLL01000134.1 Protein Homology CDS 59758 61284 . + 0 ID=cds-WP_001619392.1;Parent=gene-AD11_RS14505;Dbxref=GenBank:WP_001619392.1;Name=WP_001619392.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AD11_RS14505;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_001619392.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 61295 61810 . + . ID=gene-AD11_RS14510;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AD11_RS14510;old_locus_tag=AD11_2309 NZ_JJLL01000134.1 Protein Homology CDS 61295 61810 . + 0 ID=cds-WP_000945005.1;Parent=gene-AD11_RS14510;Dbxref=GenBank:WP_000945005.1;Name=WP_000945005.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AD11_RS14510;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945005.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 62005 62757 . + . ID=gene-AD11_RS14515;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AD11_RS14515;old_locus_tag=AD11_2310 NZ_JJLL01000134.1 Protein Homology CDS 62005 62757 . + 0 ID=cds-WP_000611911.1;Parent=gene-AD11_RS14515;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AD11_RS14515;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 62909 63859 . + . ID=gene-AD11_RS14520;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AD11_RS14520;old_locus_tag=AD11_2311 NZ_JJLL01000134.1 Protein Homology CDS 62909 63859 . + 0 ID=cds-WP_001262123.1;Parent=gene-AD11_RS14520;Dbxref=GenBank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AD11_RS14520;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 63909 64166 . - . ID=gene-AD11_RS14525;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AD11_RS14525;old_locus_tag=AD11_2312 NZ_JJLL01000134.1 Protein Homology CDS 63909 64166 . - 0 ID=cds-WP_000605090.1;Parent=gene-AD11_RS14525;Dbxref=GenBank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AD11_RS14525;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 64410 65441 . + . ID=gene-AD11_RS14530;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AD11_RS14530;old_locus_tag=AD11_2313 NZ_JJLL01000134.1 Protein Homology CDS 64410 65441 . + 0 ID=cds-WP_000559900.1;Parent=gene-AD11_RS14530;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AD11_RS14530;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 65492 67105 . - . ID=gene-AD11_RS14535;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AD11_RS14535;old_locus_tag=AD11_2314 NZ_JJLL01000134.1 Protein Homology CDS 65492 67105 . - 0 ID=cds-WP_000683020.1;Parent=gene-AD11_RS14535;Dbxref=GenBank:WP_000683020.1;Name=WP_000683020.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AD11_RS14535;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683020.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 67442 68341 . - . ID=gene-AD11_RS14545;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AD11_RS14545;old_locus_tag=AD11_2315 NZ_JJLL01000134.1 Protein Homology CDS 67442 68341 . - 0 ID=cds-WP_000817688.1;Parent=gene-AD11_RS14545;Dbxref=GenBank:WP_000817688.1;Name=WP_000817688.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309937.1;locus_tag=AD11_RS14545;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817688.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 68479 69399 . + . ID=gene-AD11_RS14550;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=protein_coding;locus_tag=AD11_RS14550;old_locus_tag=AD11_2316 NZ_JJLL01000134.1 Protein Homology CDS 68479 69399 . + 0 ID=cds-WP_001302107.1;Parent=gene-AD11_RS14550;Dbxref=GenBank:WP_001302107.1;Name=WP_001302107.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycjY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309936.2;locus_tag=AD11_RS14550;product=alpha/beta hydrolase;protein_id=WP_001302107.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 69470 69658 . + . ID=gene-AD11_RS14555;Name=AD11_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14555;old_locus_tag=AD11_2317 NZ_JJLL01000134.1 Protein Homology CDS 69470 69658 . + 0 ID=cds-WP_001295590.1;Parent=gene-AD11_RS14555;Dbxref=GenBank:WP_001295590.1;Name=WP_001295590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AD11_RS14555;product=NAD(P)H-binding protein;protein_id=WP_001295590.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 69735 70463 . + . ID=gene-AD11_RS14560;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AD11_RS14560;old_locus_tag=AD11_2318 NZ_JJLL01000134.1 Protein Homology CDS 69735 70463 . + 0 ID=cds-WP_001295589.1;Parent=gene-AD11_RS14560;Dbxref=GenBank:WP_001295589.1;Name=WP_001295589.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AD11_RS14560;product=murein tripeptide amidase MpaA;protein_id=WP_001295589.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 70438 71403 . - . ID=gene-AD11_RS14565;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AD11_RS14565;old_locus_tag=AD11_2319 NZ_JJLL01000134.1 Protein Homology CDS 70438 71403 . - 0 ID=cds-WP_001295588.1;Parent=gene-AD11_RS14565;Dbxref=GenBank:WP_001295588.1;Name=WP_001295588.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707230.2;locus_tag=AD11_RS14565;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001295588.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 71522 72028 . + . ID=gene-AD11_RS14570;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AD11_RS14570;old_locus_tag=AD11_2320 NZ_JJLL01000134.1 Protein Homology CDS 71522 72028 . + 0 ID=cds-WP_000084387.1;Parent=gene-AD11_RS14570;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AD11_RS14570;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 72072 73613 . - . ID=gene-AD11_RS14575;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AD11_RS14575;old_locus_tag=AD11_2321 NZ_JJLL01000134.1 Protein Homology CDS 72072 73613 . - 0 ID=cds-WP_001300658.1;Parent=gene-AD11_RS14575;Dbxref=GenBank:WP_001300658.1;Name=WP_001300658.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AD11_RS14575;product=transcriptional regulator TyrR;protein_id=WP_001300658.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 73761 74822 . - . ID=gene-AD11_RS14580;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AD11_RS14580;old_locus_tag=AD11_2322 NZ_JJLL01000134.1 Protein Homology CDS 73761 74822 . - 0 ID=cds-WP_000138728.1;Parent=gene-AD11_RS14580;Dbxref=GenBank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AD11_RS14580;product=YcjF family protein;protein_id=WP_000138728.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 74819 76216 . - . ID=gene-AD11_RS14585;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AD11_RS14585;old_locus_tag=AD11_2323 NZ_JJLL01000134.1 Protein Homology CDS 74819 76216 . - 0 ID=cds-WP_000825775.1;Parent=gene-AD11_RS14585;Dbxref=GenBank:WP_000825775.1;Name=WP_000825775.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AD11_RS14585;product=YcjX family protein;protein_id=WP_000825775.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 76372 77370 . + . ID=gene-AD11_RS14590;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=AD11_RS14590;old_locus_tag=AD11_2324 NZ_JJLL01000134.1 Protein Homology CDS 76372 77370 . + 0 ID=cds-WP_000075375.1;Parent=gene-AD11_RS14590;Dbxref=GenBank:WP_000075375.1;Name=WP_000075375.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycjW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AD11_RS14590;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_000075375.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 77481 78386 . - . ID=gene-AD11_RS14595;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AD11_RS14595;old_locus_tag=AD11_2325 NZ_JJLL01000134.1 Protein Homology CDS 77481 78386 . - 0 ID=cds-WP_000735257.1;Parent=gene-AD11_RS14595;Dbxref=GenBank:WP_000735257.1;Name=WP_000735257.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AD11_RS14595;product=monomeric porin OmpG;protein_id=WP_000735257.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 78431 79513 . - . ID=gene-AD11_RS14600;Name=AD11_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14600;old_locus_tag=AD11_2326 NZ_JJLL01000134.1 Protein Homology CDS 78431 79513 . - 0 ID=cds-WP_000057985.1;Parent=gene-AD11_RS14600;Dbxref=GenBank:WP_000057985.1;Name=WP_000057985.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AD11_RS14600;product=ABC transporter ATP-binding protein;protein_id=WP_000057985.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 79527 80186 . - . ID=gene-AD11_RS14605;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AD11_RS14605;old_locus_tag=AD11_2327 NZ_JJLL01000134.1 Protein Homology CDS 79527 80186 . - 0 ID=cds-WP_000775794.1;Parent=gene-AD11_RS14605;Dbxref=GenBank:WP_000775794.1;Name=WP_000775794.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AD11_RS14605;product=beta-phosphoglucomutase;protein_id=WP_000775794.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 80183 82450 . - . ID=gene-AD11_RS14610;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=protein_coding;locus_tag=AD11_RS14610;old_locus_tag=AD11_2328 NZ_JJLL01000134.1 Protein Homology CDS 80183 82450 . - 0 ID=cds-WP_033865380.1;Parent=gene-AD11_RS14610;Dbxref=GenBank:WP_033865380.1;Name=WP_033865380.1;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415832.1;locus_tag=AD11_RS14610;product=kojibiose phosphorylase;protein_id=WP_033865380.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 82447 83502 . - . ID=gene-AD11_RS14615;Name=ycjS;gbkey=Gene;gene=ycjS;gene_biotype=protein_coding;locus_tag=AD11_RS14615;old_locus_tag=AD11_2329 NZ_JJLL01000134.1 Protein Homology CDS 82447 83502 . - 0 ID=cds-WP_000833585.1;Parent=gene-AD11_RS14615;Dbxref=GenBank:WP_000833585.1;Name=WP_000833585.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ycjS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309921.1;locus_tag=AD11_RS14615;product=Gfo/Idh/MocA family protein;protein_id=WP_000833585.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 83512 84300 . - . ID=gene-AD11_RS14620;Name=ycjR;gbkey=Gene;gene=ycjR;gene_biotype=protein_coding;locus_tag=AD11_RS14620;old_locus_tag=AD11_2330 NZ_JJLL01000134.1 Protein Homology CDS 83512 84300 . - 0 ID=cds-WP_000690230.1;Parent=gene-AD11_RS14620;Dbxref=GenBank:WP_000690230.1;Name=WP_000690230.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=ycjR;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AD11_RS14620;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_000690230.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 84318 85370 . - . ID=gene-AD11_RS14625;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=AD11_RS14625;old_locus_tag=AD11_2331 NZ_JJLL01000134.1 Protein Homology CDS 84318 85370 . - 0 ID=cds-WP_000737347.1;Parent=gene-AD11_RS14625;Dbxref=GenBank:WP_000737347.1;Name=WP_000737347.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ycjQ;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AD11_RS14625;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000737347.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 85401 86243 . - . ID=gene-AD11_RS14630;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=AD11_RS14630;old_locus_tag=AD11_2332 NZ_JJLL01000134.1 Protein Homology CDS 85401 86243 . - 0 ID=cds-WP_000224659.1;Parent=gene-AD11_RS14630;Dbxref=GenBank:WP_000224659.1;Name=WP_000224659.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ycjP;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AD11_RS14630;product=carbohydrate ABC transporter permease;protein_id=WP_000224659.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 86230 87111 . - . ID=gene-AD11_RS14635;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=AD11_RS14635;old_locus_tag=AD11_2333 NZ_JJLL01000134.1 Protein Homology CDS 86230 87111 . - 0 ID=cds-WP_001080790.1;Parent=gene-AD11_RS14635;Dbxref=GenBank:WP_001080790.1;Name=WP_001080790.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ycjO;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AD11_RS14635;product=carbohydrate ABC transporter permease;protein_id=WP_001080790.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 87132 88424 . - . ID=gene-AD11_RS14640;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=AD11_RS14640;old_locus_tag=AD11_2334 NZ_JJLL01000134.1 Protein Homology CDS 87132 88424 . - 0 ID=cds-WP_000597460.1;Parent=gene-AD11_RS14640;Dbxref=GenBank:WP_000597460.1;Name=WP_000597460.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ycjN;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AD11_RS14640;product=ABC transporter substrate-binding protein;protein_id=WP_000597460.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 88438 90117 . - . ID=gene-AD11_RS14645;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;locus_tag=AD11_RS14645;old_locus_tag=AD11_2335 NZ_JJLL01000134.1 Protein Homology CDS 88438 90117 . - 0 ID=cds-WP_000810500.1;Parent=gene-AD11_RS14645;Dbxref=GenBank:WP_000810500.1;Name=WP_000810500.1;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AD11_RS14645;product=glucosylglycerate phosphorylase;protein_id=WP_000810500.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 90329 90643 . - . ID=gene-AD11_RS14650;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AD11_RS14650;old_locus_tag=AD11_2336 NZ_JJLL01000134.1 Protein Homology CDS 90329 90643 . - 0 ID=cds-WP_000473109.1;Parent=gene-AD11_RS14650;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AD11_RS14650;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 90718 90939 . - . ID=gene-AD11_RS14655;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AD11_RS14655;old_locus_tag=AD11_2337 NZ_JJLL01000134.1 Protein Homology CDS 90718 90939 . - 0 ID=cds-WP_001400279.1;Parent=gene-AD11_RS14655;Dbxref=GenBank:WP_001400279.1;Name=WP_001400279.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AD11_RS14655;product=phage shock protein PspD;protein_id=WP_001400279.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 90948 91307 . - . ID=gene-AD11_RS14660;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AD11_RS14660;old_locus_tag=AD11_2338 NZ_JJLL01000134.1 Protein Homology CDS 90948 91307 . - 0 ID=cds-WP_000907387.1;Parent=gene-AD11_RS14660;Dbxref=GenBank:WP_000907387.1;Name=WP_000907387.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AD11_RS14660;product=envelope stress response membrane protein PspC;protein_id=WP_000907387.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 91307 91531 . - . ID=gene-AD11_RS14665;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AD11_RS14665;old_locus_tag=AD11_2339 NZ_JJLL01000134.1 Protein Homology CDS 91307 91531 . - 0 ID=cds-WP_001274963.1;Parent=gene-AD11_RS14665;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AD11_RS14665;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 91585 92253 . - . ID=gene-AD11_RS14670;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AD11_RS14670;old_locus_tag=AD11_2340 NZ_JJLL01000134.1 Protein Homology CDS 91585 92253 . - 0 ID=cds-WP_000511025.1;Parent=gene-AD11_RS14670;Dbxref=GenBank:WP_000511025.1;Name=WP_000511025.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AD11_RS14670;product=phage shock protein PspA;protein_id=WP_000511025.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 92420 93397 . + . ID=gene-AD11_RS14675;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AD11_RS14675;old_locus_tag=AD11_2341 NZ_JJLL01000134.1 Protein Homology CDS 92420 93397 . + 0 ID=cds-WP_000852835.1;Parent=gene-AD11_RS14675;Dbxref=GenBank:WP_000852835.1;Name=WP_000852835.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=AD11_RS14675;product=phage shock protein operon transcriptional activator;protein_id=WP_000852835.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 93517 94782 . - . ID=gene-AD11_RS14680;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AD11_RS14680;old_locus_tag=AD11_2342 NZ_JJLL01000134.1 Protein Homology CDS 93517 94782 . - 0 ID=cds-WP_000069229.1;Parent=gene-AD11_RS14680;Dbxref=GenBank:WP_000069229.1;Name=WP_000069229.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415818.1;locus_tag=AD11_RS14680;product=4-aminobutyrate transaminase;protein_id=WP_000069229.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 94820 96100 . - . ID=gene-AD11_RS14685;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AD11_RS14685;old_locus_tag=AD11_2343 NZ_JJLL01000134.1 Protein Homology CDS 94820 96100 . - 0 ID=cds-WP_000134870.1;Parent=gene-AD11_RS14685;Dbxref=GenBank:WP_000134870.1;Name=WP_000134870.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AD11_RS14685;product=gamma-glutamylputrescine oxidase;protein_id=WP_000134870.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 96102 97589 . - . ID=gene-AD11_RS14690;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AD11_RS14690;old_locus_tag=AD11_2344 NZ_JJLL01000134.1 Protein Homology CDS 96102 97589 . - 0 ID=cds-WP_001009090.1;Parent=gene-AD11_RS14690;Dbxref=GenBank:WP_001009090.1;Name=WP_001009090.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AD11_RS14690;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009090.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 97864 98421 . - . ID=gene-AD11_RS14695;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AD11_RS14695;old_locus_tag=AD11_2345 NZ_JJLL01000134.1 Protein Homology CDS 97864 98421 . - 0 ID=cds-WP_001278727.1;Parent=gene-AD11_RS14695;Dbxref=GenBank:WP_001278727.1;Name=WP_001278727.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AD11_RS14695;product=HTH-type transcriptional regulator PuuR;protein_id=WP_001278727.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 98448 99212 . - . ID=gene-AD11_RS14700;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AD11_RS14700;old_locus_tag=AD11_2346 NZ_JJLL01000134.1 Protein Homology CDS 98448 99212 . - 0 ID=cds-WP_001300506.1;Parent=gene-AD11_RS14700;Dbxref=GenBank:WP_001300506.1;Name=WP_001300506.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AD11_RS14700;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 99424 100842 . + . ID=gene-AD11_RS14705;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AD11_RS14705;old_locus_tag=AD11_2347 NZ_JJLL01000134.1 Protein Homology CDS 99424 100842 . + 0 ID=cds-WP_001300763.1;Parent=gene-AD11_RS14705;Dbxref=GenBank:WP_001300763.1;Name=WP_001300763.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AD11_RS14705;product=glutamate-putrescine ligase;protein_id=WP_001300763.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 100991 101155 . + . ID=gene-AD11_RS31625;Name=AD11_RS31625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31625 NZ_JJLL01000134.1 Protein Homology CDS 100991 101155 . + 0 ID=cds-WP_120795382.1;Parent=gene-AD11_RS31625;Dbxref=GenBank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AD11_RS31625;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 101145 102530 . + . ID=gene-AD11_RS14710;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AD11_RS14710;old_locus_tag=AD11_2348 NZ_JJLL01000134.1 Protein Homology CDS 101145 102530 . + 0 ID=cds-WP_000996861.1;Parent=gene-AD11_RS14710;Dbxref=GenBank:WP_000996861.1;Name=WP_000996861.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309900.2;locus_tag=AD11_RS14710;product=putrescine/proton symporter PuuP;protein_id=WP_000996861.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 102664 102909 . + . ID=gene-AD11_RS14715;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=AD11_RS14715;old_locus_tag=AD11_2349 NZ_JJLL01000134.1 Protein Homology CDS 102664 102909 . + 0 ID=cds-WP_001015099.1;Parent=gene-AD11_RS14715;Dbxref=GenBank:WP_001015099.1;Name=WP_001015099.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309899.1;locus_tag=AD11_RS14715;product=YmjA family protein;protein_id=WP_001015099.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 103221 104864 . + . ID=gene-AD11_RS14725;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AD11_RS14725;old_locus_tag=AD11_2350 NZ_JJLL01000134.1 Protein Homology CDS 103221 104864 . + 0 ID=cds-WP_001250216.1;Parent=gene-AD11_RS14725;Dbxref=GenBank:WP_001250216.1;Name=WP_001250216.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AD11_RS14725;product=ABC transporter substrate-binding protein SapA;protein_id=WP_001250216.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 104861 105826 . + . ID=gene-AD11_RS14730;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AD11_RS14730;old_locus_tag=AD11_2351 NZ_JJLL01000134.1 Protein Homology CDS 104861 105826 . + 0 ID=cds-WP_000583277.1;Parent=gene-AD11_RS14730;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AD11_RS14730;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 105813 106703 . + . ID=gene-AD11_RS14735;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AD11_RS14735;old_locus_tag=AD11_2352 NZ_JJLL01000134.1 Protein Homology CDS 105813 106703 . + 0 ID=cds-WP_001146163.1;Parent=gene-AD11_RS14735;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AD11_RS14735;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 106703 107695 . + . ID=gene-AD11_RS14740;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AD11_RS14740;old_locus_tag=AD11_2353 NZ_JJLL01000134.1 Protein Homology CDS 106703 107695 . + 0 ID=cds-WP_001128858.1;Parent=gene-AD11_RS14740;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AD11_RS14740;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 107697 108503 . + . ID=gene-AD11_RS14745;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AD11_RS14745;old_locus_tag=AD11_2354 NZ_JJLL01000134.1 Protein Homology CDS 107697 108503 . + 0 ID=cds-WP_032083646.1;Parent=gene-AD11_RS14745;Dbxref=GenBank:WP_032083646.1;Name=WP_032083646.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=AD11_RS14745;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_032083646.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 108571 108924 . + . ID=gene-AD11_RS14750;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=AD11_RS14750;old_locus_tag=AD11_2355 NZ_JJLL01000134.1 Protein Homology CDS 108571 108924 . + 0 ID=cds-WP_000968857.1;Parent=gene-AD11_RS14750;Dbxref=GenBank:WP_000968857.1;Name=WP_000968857.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415805.1;locus_tag=AD11_RS14750;product=DUF559 domain-containing protein;protein_id=WP_000968857.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 109294 110082 . + . ID=gene-AD11_RS14760;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AD11_RS14760;old_locus_tag=AD11_2356 NZ_JJLL01000134.1 Protein Homology CDS 109294 110082 . + 0 ID=cds-WP_000506490.1;Parent=gene-AD11_RS14760;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AD11_RS14760;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 110226 111353 . + . ID=gene-AD11_RS14765;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AD11_RS14765;old_locus_tag=AD11_2357 NZ_JJLL01000134.1 Protein Homology CDS 110226 111353 . + 0 ID=cds-WP_001301103.1;Parent=gene-AD11_RS14765;Dbxref=GenBank:WP_001301103.1;Name=WP_001301103.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707196.2;locus_tag=AD11_RS14765;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_001301103.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 111421 113355 . + . ID=gene-AD11_RS14770;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AD11_RS14770;old_locus_tag=AD11_2358 NZ_JJLL01000134.1 Protein Homology CDS 111421 113355 . + 0 ID=cds-WP_000484979.1;Parent=gene-AD11_RS14770;Dbxref=GenBank:WP_000484979.1;Name=WP_000484979.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AD11_RS14770;product=exoribonuclease II;protein_id=WP_000484979.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 113432 113535 . - . ID=gene-AD11_RS30810;Name=AD11_RS30810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30810;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 113432 113535 . - 0 ID=cds-AD11_RS30810;Parent=gene-AD11_RS30810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AD11_RS30810;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 113589 115574 . + . ID=gene-AD11_RS14780;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AD11_RS14780;old_locus_tag=AD11_2359 NZ_JJLL01000134.1 Protein Homology CDS 113589 115574 . + 0 ID=cds-WP_000859984.1;Parent=gene-AD11_RS14780;Dbxref=GenBank:WP_000859984.1;Name=WP_000859984.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309885.1;locus_tag=AD11_RS14780;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000859984.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 115556 115684 . - . ID=gene-AD11_RS32635;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AD11_RS32635 NZ_JJLL01000134.1 Protein Homology CDS 115556 115684 . - 0 ID=cds-WP_211180493.1;Parent=gene-AD11_RS32635;Dbxref=GenBank:WP_211180493.1;Name=WP_211180493.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AD11_RS32635;product=protein YmiD;protein_id=WP_211180493.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 115721 115894 . + . ID=gene-AD11_RS14785;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AD11_RS14785;old_locus_tag=AD11_2360 NZ_JJLL01000134.1 Protein Homology CDS 115721 115894 . + 0 ID=cds-WP_001288368.1;Parent=gene-AD11_RS14785;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AD11_RS14785;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 115984 116733 . + . ID=gene-AD11_RS14790;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=AD11_RS14790;old_locus_tag=AD11_2361 NZ_JJLL01000134.1 Protein Homology CDS 115984 116733 . + 0 ID=cds-WP_001088621.1;Parent=gene-AD11_RS14790;Dbxref=GenBank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AD11_RS14790;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 117002 117220 . + . ID=gene-AD11_RS14795;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AD11_RS14795;old_locus_tag=AD11_2362 NZ_JJLL01000134.1 Protein Homology CDS 117002 117220 . + 0 ID=cds-WP_000498253.1;Parent=gene-AD11_RS14795;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AD11_RS14795;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 117346 117672 . - . ID=gene-AD11_RS14800;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AD11_RS14800;old_locus_tag=AD11_2363 NZ_JJLL01000134.1 Protein Homology CDS 117346 117672 . - 0 ID=cds-WP_001295580.1;Parent=gene-AD11_RS14800;Dbxref=GenBank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AD11_RS14800;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 117672 118409 . - . ID=gene-AD11_RS14805;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AD11_RS14805;old_locus_tag=AD11_2364 NZ_JJLL01000134.1 Protein Homology CDS 117672 118409 . - 0 ID=cds-WP_000176278.1;Parent=gene-AD11_RS14805;Dbxref=GenBank:WP_000176278.1;Name=WP_000176278.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AD11_RS14805;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176278.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 118602 119771 . - . ID=gene-AD11_RS14810;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AD11_RS14810;old_locus_tag=AD11_2366 NZ_JJLL01000134.1 Protein Homology CDS 118602 119771 . - 0 ID=cds-WP_000891353.1;Parent=gene-AD11_RS14810;Dbxref=GenBank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AD11_RS14810;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 119778 120086 . - . ID=gene-AD11_RS14815;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AD11_RS14815;old_locus_tag=AD11_2367 NZ_JJLL01000134.1 Protein Homology CDS 119778 120086 . - 0 ID=cds-WP_000876286.1;Parent=gene-AD11_RS14815;Dbxref=GenBank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AD11_RS14815;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 120235 120999 . - . ID=gene-AD11_RS14820;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AD11_RS14820;old_locus_tag=AD11_2368 NZ_JJLL01000134.1 Protein Homology CDS 120235 120999 . - 0 ID=cds-WP_001619378.1;Parent=gene-AD11_RS14820;Dbxref=GenBank:WP_001619378.1;Name=WP_001619378.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AD11_RS14820;product=phosphatidylglycerophosphatase B;protein_id=WP_001619378.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 121169 121759 . + . ID=gene-AD11_RS14825;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AD11_RS14825;old_locus_tag=AD11_2369 NZ_JJLL01000134.1 Protein Homology CDS 121169 121759 . + 0 ID=cds-WP_001176295.1;Parent=gene-AD11_RS14825;Dbxref=GenBank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AD11_RS14825;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 121823 124498 . - . ID=gene-AD11_RS14830;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AD11_RS14830;old_locus_tag=AD11_2370 NZ_JJLL01000134.1 Protein Homology CDS 121823 124498 . - 0 ID=cds-WP_000099534.1;Parent=gene-AD11_RS14830;Dbxref=GenBank:WP_000099534.1;Name=WP_000099534.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AD11_RS14830;product=aconitate hydratase AcnA;protein_id=WP_000099534.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 124662 124757 . - . ID=gene-AD11_RS31630;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AD11_RS31630 NZ_JJLL01000134.1 Protein Homology CDS 124662 124757 . - 0 ID=cds-WP_001310756.1;Parent=gene-AD11_RS31630;Dbxref=GenBank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AD11_RS31630;product=small membrane protein YmiC;protein_id=WP_001310756.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 124871 125038 . - . ID=gene-AD11_RS14845;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=AD11_RS14845;old_locus_tag=AD11_2371 NZ_JJLL01000134.1 Protein Homology CDS 124871 125038 . - 0 ID=cds-WP_001297116.1;Parent=gene-AD11_RS14845;Dbxref=GenBank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AD11_RS14845;product=protein YciX;protein_id=WP_001297116.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 125041 125181 . - . ID=gene-AD11_RS14850;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AD11_RS14850;old_locus_tag=AD11_2372 NZ_JJLL01000134.1 Protein Homology CDS 125041 125181 . - 0 ID=cds-WP_001300896.1;Parent=gene-AD11_RS14850;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AD11_RS14850;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 125500 126474 . - . ID=gene-AD11_RS14855;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AD11_RS14855;old_locus_tag=AD11_2373 NZ_JJLL01000134.1 Protein Homology CDS 125500 126474 . - 0 ID=cds-WP_000776253.1;Parent=gene-AD11_RS14855;Dbxref=GenBank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AD11_RS14855;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 126684 129281 . - . ID=gene-AD11_RS14860;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AD11_RS14860;old_locus_tag=AD11_2374 NZ_JJLL01000134.1 Protein Homology CDS 126684 129281 . - 0 ID=cds-WP_001619376.1;Parent=gene-AD11_RS14860;Dbxref=GenBank:WP_001619376.1;Name=WP_001619376.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AD11_RS14860;product=type I DNA topoisomerase;protein_id=WP_001619376.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 129661 129912 . + . ID=gene-AD11_RS14870;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AD11_RS14870;old_locus_tag=AD11_2375 NZ_JJLL01000134.1 Protein Homology CDS 129661 129912 . + 0 ID=cds-WP_001031494.1;Parent=gene-AD11_RS14870;Dbxref=GenBank:WP_001031494.1;Name=WP_001031494.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AD11_RS14870;product=YciN family protein;protein_id=WP_001031494.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 129948 130997 . - . ID=gene-AD11_RS14875;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AD11_RS14875;old_locus_tag=AD11_2376 NZ_JJLL01000134.1 Protein Homology CDS 129948 130997 . - 0 ID=cds-WP_000422045.1;Parent=gene-AD11_RS14875;Dbxref=GenBank:WP_000422045.1;Name=WP_000422045.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AD11_RS14875;product=protease SohB;protein_id=WP_000422045.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 131217 131975 . + . ID=gene-AD11_RS14885;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AD11_RS14885;old_locus_tag=AD11_2377 NZ_JJLL01000134.1 Protein Homology CDS 131217 131975 . + 0 ID=cds-WP_000559280.1;Parent=gene-AD11_RS14885;Dbxref=GenBank:WP_000559280.1;Name=WP_000559280.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309870.1;locus_tag=AD11_RS14885;product=YciK family oxidoreductase;protein_id=WP_000559280.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 131972 132562 . + . ID=gene-AD11_RS14890;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AD11_RS14890;old_locus_tag=AD11_2378 NZ_JJLL01000134.1 Protein Homology CDS 131972 132562 . + 0 ID=cds-WP_001278907.1;Parent=gene-AD11_RS14890;Dbxref=GenBank:WP_001278907.1;Name=WP_001278907.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AD11_RS14890;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278907.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 132602 133477 . - . ID=gene-AD11_RS14895;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AD11_RS14895;old_locus_tag=AD11_2379 NZ_JJLL01000134.1 Protein Homology CDS 132602 133477 . - 0 ID=cds-WP_001291217.1;Parent=gene-AD11_RS14895;Dbxref=GenBank:WP_001291217.1;Name=WP_001291217.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415785.1;locus_tag=AD11_RS14895;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291217.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 133690 135585 . - . ID=gene-AD11_RS14900;Name=yciQ;gbkey=Gene;gene=yciQ;gene_biotype=protein_coding;locus_tag=AD11_RS14900;old_locus_tag=AD11_2380 NZ_JJLL01000134.1 Protein Homology CDS 133690 135585 . - 0 ID=cds-WP_001301109.1;Parent=gene-AD11_RS14900;Dbxref=GenBank:WP_001301109.1;Name=WP_001301109.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yciQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415784.1;locus_tag=AD11_RS14900;product=DUF2207 domain-containing protein;protein_id=WP_001301109.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 135613 136233 . - . ID=gene-AD11_RS14905;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AD11_RS14905;old_locus_tag=AD11_2381 NZ_JJLL01000134.1 Protein Homology CDS 135613 136233 . - 0 ID=cds-WP_001295575.1;Parent=gene-AD11_RS14905;Dbxref=GenBank:WP_001295575.1;Name=WP_001295575.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AD11_RS14905;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001295575.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 136230 137111 . - . ID=gene-AD11_RS14910;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AD11_RS14910;old_locus_tag=AD11_2382 NZ_JJLL01000134.1 Protein Homology CDS 136230 137111 . - 0 ID=cds-WP_001285661.1;Parent=gene-AD11_RS14910;Dbxref=GenBank:WP_001285661.1;Name=WP_001285661.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AD11_RS14910;product=RNase RNM;protein_id=WP_001285661.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 137249 137293 . + . ID=gene-AD11_RS29405;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AD11_RS29405 NZ_JJLL01000134.1 Protein Homology CDS 137249 137293 . + 0 ID=cds-WP_001700591.1;Parent=gene-AD11_RS29405;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AD11_RS29405;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JJLL01000134.1 cmsearch sequence_feature 137270 137363 . + . ID=id-NZ_JJLL01000134.1:137270..137363;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLL01000134.1 RefSeq gene 137385 138947 . + . ID=gene-AD11_RS14915;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AD11_RS14915;old_locus_tag=AD11_2383 NZ_JJLL01000134.1 Protein Homology CDS 137385 138947 . + 0 ID=cds-WP_001194582.1;Parent=gene-AD11_RS14915;Dbxref=GenBank:WP_001194582.1;Name=WP_001194582.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AD11_RS14915;product=anthranilate synthase component I;protein_id=WP_001194582.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 138947 140542 . + . ID=gene-AD11_RS14920;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AD11_RS14920;old_locus_tag=AD11_2384 NZ_JJLL01000134.1 Protein Homology CDS 138947 140542 . + 0 ID=cds-WP_000763511.1;Parent=gene-AD11_RS14920;Dbxref=GenBank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AD11_RS14920;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 140543 141904 . + . ID=gene-AD11_RS14925;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AD11_RS14925;old_locus_tag=AD11_2385 NZ_JJLL01000134.1 Protein Homology CDS 140543 141904 . + 0 ID=cds-WP_000983871.1;Parent=gene-AD11_RS14925;Dbxref=GenBank:WP_000983871.1;Name=WP_000983871.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415778.3;locus_tag=AD11_RS14925;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_000983871.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 141916 143109 . + . ID=gene-AD11_RS14930;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AD11_RS14930;old_locus_tag=AD11_2386 NZ_JJLL01000134.1 Protein Homology CDS 141916 143109 . + 0 ID=cds-WP_000209520.1;Parent=gene-AD11_RS14930;Dbxref=GenBank:WP_000209520.1;Name=WP_000209520.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=AD11_RS14930;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 143109 143915 . + . ID=gene-AD11_RS14935;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AD11_RS14935;old_locus_tag=AD11_2387 NZ_JJLL01000134.1 Protein Homology CDS 143109 143915 . + 0 ID=cds-WP_000443067.1;Parent=gene-AD11_RS14935;Dbxref=GenBank:WP_000443067.1;Name=WP_000443067.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AD11_RS14935;product=tryptophan synthase subunit alpha;protein_id=WP_000443067.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 144296 144475 . + . ID=gene-AD11_RS14940;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AD11_RS14940;old_locus_tag=AD11_2388 NZ_JJLL01000134.1 Protein Homology CDS 144296 144475 . + 0 ID=cds-WP_000807651.1;Parent=gene-AD11_RS14940;Dbxref=GenBank:WP_000807651.1;Name=WP_000807651.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AD11_RS14940;product=general stress protein;protein_id=WP_000807651.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 144561 145061 . + . ID=gene-AD11_RS14945;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AD11_RS14945;old_locus_tag=AD11_2389 NZ_JJLL01000134.1 Protein Homology CDS 144561 145061 . + 0 ID=cds-WP_001056490.1;Parent=gene-AD11_RS14945;Dbxref=GenBank:WP_001056490.1;Name=WP_001056490.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415774.1;locus_tag=AD11_RS14945;product=ferritin-like domain-containing protein;protein_id=WP_001056490.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 145107 145613 . + . ID=gene-AD11_RS14950;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=AD11_RS14950;old_locus_tag=AD11_2390 NZ_JJLL01000134.1 Protein Homology CDS 145107 145613 . + 0 ID=cds-WP_001079505.1;Parent=gene-AD11_RS14950;Dbxref=GenBank:WP_001079505.1;Name=WP_001079505.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415773.1;locus_tag=AD11_RS14950;product=ferritin-like domain-containing protein;protein_id=WP_001079505.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 145673 145798 . - . ID=gene-AD11_RS29410;Name=AD11_RS29410;end_range=145798,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29410;old_locus_tag=AD11_2391;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 145673 145798 . - 0 ID=cds-AD11_RS29410;Parent=gene-AD11_RS29410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;end_range=145798,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AD11_RS29410;partial=true;product=OmpW family outer membrane protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 146021 146290 . - . ID=gene-AD11_RS33205;Name=AD11_RS33205;end_range=146290,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33205;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 146021 146290 . - 0 ID=cds-AD11_RS33205;Parent=gene-AD11_RS33205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=146290,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701868.1;locus_tag=AD11_RS33205;partial=true;product=DUF4376 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 146387 146563 . - . ID=gene-AD11_RS32640;Name=AD11_RS32640;end_range=146563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32640;old_locus_tag=AD11_2393;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 146387 146563 . - 0 ID=cds-AD11_RS32640;Parent=gene-AD11_RS32640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=146563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AD11_RS32640;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 146713 147381 . + . ID=gene-AD11_RS14965;Name=AD11_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14965 NZ_JJLL01000134.1 Protein Homology CDS 146713 147381 . + 0 ID=cds-WP_000240999.1;Parent=gene-AD11_RS14965;Dbxref=GenBank:WP_000240999.1;Name=WP_000240999.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AD11_RS14965;product=class I SAM-dependent methyltransferase;protein_id=WP_000240999.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 147326 147463 . - . ID=gene-AD11_RS33050;Name=AD11_RS33050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33050 NZ_JJLL01000134.1 Protein Homology CDS 147326 147463 . - 0 ID=cds-WP_001309429.1;Parent=gene-AD11_RS33050;Dbxref=GenBank:WP_001309429.1;Name=WP_001309429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309429.1;locus_tag=AD11_RS33050;product=hypothetical protein;protein_id=WP_001309429.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 147436 148020 . - . ID=gene-AD11_RS14970;Name=AD11_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14970;old_locus_tag=AD11_2395 NZ_JJLL01000134.1 Protein Homology CDS 147436 148020 . - 0 ID=cds-WP_021522530.1;Parent=gene-AD11_RS14970;Dbxref=GenBank:WP_021522530.1;Name=WP_021522530.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AD11_RS14970;product=tail fiber assembly protein;protein_id=WP_021522530.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 148020 151190 . - . ID=gene-AD11_RS29420;Name=AD11_RS29420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS29420 NZ_JJLL01000134.1 Protein Homology CDS 148020 151190 . - 0 ID=cds-WP_033865375.1;Parent=gene-AD11_RS29420;Dbxref=GenBank:WP_033865375.1;Name=WP_033865375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216499.1;locus_tag=AD11_RS29420;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_033865375.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 151342 151941 . - . ID=gene-AD11_RS14985;Name=AD11_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14985;old_locus_tag=AD11_2399 NZ_JJLL01000134.1 Protein Homology CDS 151342 151941 . - 0 ID=cds-WP_001228314.1;Parent=gene-AD11_RS14985;Dbxref=GenBank:WP_001228314.1;Name=WP_001228314.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309834.1;locus_tag=AD11_RS14985;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001228314.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 152009 155482 . - . ID=gene-AD11_RS14990;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AD11_RS14990;old_locus_tag=AD11_2400 NZ_JJLL01000134.1 Protein Homology CDS 152009 155482 . - 0 ID=cds-WP_033866457.1;Parent=gene-AD11_RS14990;Dbxref=GenBank:WP_033866457.1;Name=WP_033866457.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309833.1;locus_tag=AD11_RS14990;product=phage attachment tail tip protein J;protein_id=WP_033866457.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 155825 156406 . - . ID=gene-AD11_RS14995;Name=AD11_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS14995;old_locus_tag=AD11_2401 NZ_JJLL01000134.1 Protein Homology CDS 155825 156406 . - 0 ID=cds-WP_032266388.1;Parent=gene-AD11_RS14995;Dbxref=GenBank:WP_032266388.1;Name=WP_032266388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310263.2;locus_tag=AD11_RS14995;product=tail assembly protein;protein_id=WP_032266388.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 156403 157146 . - . ID=gene-AD11_RS15000;Name=AD11_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15000;old_locus_tag=AD11_2402 NZ_JJLL01000134.1 Protein Homology CDS 156403 157146 . - 0 ID=cds-WP_033866458.1;Parent=gene-AD11_RS15000;Dbxref=GenBank:WP_033866458.1;Name=WP_033866458.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310264.2;locus_tag=AD11_RS15000;product=C40 family peptidase;protein_id=WP_033866458.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 157157 157856 . - . ID=gene-AD11_RS15005;Name=AD11_RS15005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS15005;old_locus_tag=AD11_2403;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 157157 157856 . - 0 ID=cds-AD11_RS15005;Parent=gene-AD11_RS15005;Note=frameshifted;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310012.1;locus_tag=AD11_RS15005;product=phage minor tail protein L;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 157856 158185 . - . ID=gene-AD11_RS15010;Name=AD11_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15010;old_locus_tag=AD11_2404 NZ_JJLL01000134.1 Protein Homology CDS 157856 158185 . - 0 ID=cds-WP_000847280.1;Parent=gene-AD11_RS15010;Dbxref=GenBank:WP_000847280.1;Name=WP_000847280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310192.1;locus_tag=AD11_RS15010;product=phage tail protein;protein_id=WP_000847280.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 158182 160755 . - . ID=gene-AD11_RS15015;Name=AD11_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15015;old_locus_tag=AD11_2405 NZ_JJLL01000134.1 Protein Homology CDS 158182 160755 . - 0 ID=cds-WP_033866459.1;Parent=gene-AD11_RS15015;Dbxref=GenBank:WP_033866459.1;Name=WP_033866459.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309141.1;locus_tag=AD11_RS15015;product=phage tail tape measure protein;protein_id=WP_033866459.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 160736 161149 . - . ID=gene-AD11_RS15020;Name=AD11_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15020;old_locus_tag=AD11_2406 NZ_JJLL01000134.1 Protein Homology CDS 160736 161149 . - 0 ID=cds-WP_000533402.1;Parent=gene-AD11_RS15020;Dbxref=GenBank:WP_000533402.1;Name=WP_000533402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309140.2;locus_tag=AD11_RS15020;product=phage tail assembly protein T;protein_id=WP_000533402.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 161176 161607 . - . ID=gene-AD11_RS15025;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=AD11_RS15025;old_locus_tag=AD11_2407 NZ_JJLL01000134.1 Protein Homology CDS 161176 161607 . - 0 ID=cds-WP_033865026.1;Parent=gene-AD11_RS15025;Dbxref=GenBank:WP_033865026.1;Name=WP_033865026.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310755.1;locus_tag=AD11_RS15025;product=phage tail assembly chaperone G;protein_id=WP_033865026.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 161621 162373 . - . ID=gene-AD11_RS15030;Name=AD11_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15030;old_locus_tag=AD11_2408 NZ_JJLL01000134.1 Protein Homology CDS 161621 162373 . - 0 ID=cds-WP_033865028.1;Parent=gene-AD11_RS15030;Dbxref=GenBank:WP_033865028.1;Name=WP_033865028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310196.1;locus_tag=AD11_RS15030;product=phage tail protein;protein_id=WP_033865028.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 162381 162776 . - . ID=gene-AD11_RS15035;Name=AD11_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15035;old_locus_tag=AD11_2409 NZ_JJLL01000134.1 Protein Homology CDS 162381 162776 . - 0 ID=cds-WP_000683079.1;Parent=gene-AD11_RS15035;Dbxref=GenBank:WP_000683079.1;Name=WP_000683079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310197.1;locus_tag=AD11_RS15035;product=phage minor tail U family protein;protein_id=WP_000683079.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 162773 163348 . - . ID=gene-AD11_RS15040;Name=AD11_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15040;old_locus_tag=AD11_2410 NZ_JJLL01000134.1 Protein Homology CDS 162773 163348 . - 0 ID=cds-WP_033865030.1;Parent=gene-AD11_RS15040;Dbxref=GenBank:WP_033865030.1;Name=WP_033865030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310198.1;locus_tag=AD11_RS15040;product=phage tail protein;protein_id=WP_033865030.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 163364 163717 . - . ID=gene-AD11_RS15045;Name=AD11_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15045;old_locus_tag=AD11_2411 NZ_JJLL01000134.1 Protein Homology CDS 163364 163717 . - 0 ID=cds-WP_001204533.1;Parent=gene-AD11_RS15045;Dbxref=GenBank:WP_001204533.1;Name=WP_001204533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204533.1;locus_tag=AD11_RS15045;product=head-tail joining protein;protein_id=WP_001204533.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 163710 164093 . - . ID=gene-AD11_RS15050;Name=gpFI;gbkey=Gene;gene=gpFI;gene_biotype=protein_coding;locus_tag=AD11_RS15050;old_locus_tag=AD11_2412 NZ_JJLL01000134.1 Protein Homology CDS 163710 164093 . - 0 ID=cds-WP_000201501.1;Parent=gene-AD11_RS15050;Dbxref=GenBank:WP_000201501.1;Name=WP_000201501.1;gbkey=CDS;gene=gpFI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355131.1;locus_tag=AD11_RS15050;product=DNA-packaging protein FI;protein_id=WP_000201501.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 164145 165173 . - . ID=gene-AD11_RS15055;Name=AD11_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15055;old_locus_tag=AD11_2413 NZ_JJLL01000134.1 Protein Homology CDS 164145 165173 . - 0 ID=cds-WP_033865032.1;Parent=gene-AD11_RS15055;Dbxref=GenBank:WP_033865032.1;Name=WP_033865032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706633.1;locus_tag=AD11_RS15055;product=major capsid protein;protein_id=WP_033865032.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 165231 165578 . - . ID=gene-AD11_RS15060;Name=AD11_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15060;old_locus_tag=AD11_2414 NZ_JJLL01000134.1 Protein Homology CDS 165231 165578 . - 0 ID=cds-WP_033865034.1;Parent=gene-AD11_RS15060;Dbxref=GenBank:WP_033865034.1;Name=WP_033865034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309136.1;locus_tag=AD11_RS15060;product=head decoration protein;protein_id=WP_033865034.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 165615 167120 . - . ID=gene-AD11_RS15065;Name=AD11_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15065;old_locus_tag=AD11_2415 NZ_JJLL01000134.1 Protein Homology CDS 165615 167120 . - 0 ID=cds-WP_033865036.1;Parent=gene-AD11_RS15065;Dbxref=GenBank:WP_033865036.1;Name=WP_033865036.1;Ontology_term=GO:0006508,GO:0008233,GO:0008236;gbkey=CDS;go_function=peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309135.1;locus_tag=AD11_RS15065;product=S49 family peptidase;protein_id=WP_033865036.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 167110 168702 . - . ID=gene-AD11_RS15070;Name=AD11_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15070;old_locus_tag=AD11_2416 NZ_JJLL01000134.1 Protein Homology CDS 167110 168702 . - 0 ID=cds-WP_033865037.1;Parent=gene-AD11_RS15070;Dbxref=GenBank:WP_033865037.1;Name=WP_033865037.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309134.1;locus_tag=AD11_RS15070;product=phage portal protein;protein_id=WP_033865037.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 168699 168905 . - . ID=gene-AD11_RS15075;Name=AD11_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15075;old_locus_tag=AD11_2417 NZ_JJLL01000134.1 Protein Homology CDS 168699 168905 . - 0 ID=cds-WP_000259002.1;Parent=gene-AD11_RS15075;Dbxref=GenBank:WP_000259002.1;Name=WP_000259002.1;Ontology_term=GO:0019058;gbkey=CDS;go_process=viral life cycle|0019058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310761.1;locus_tag=AD11_RS15075;product=phage head-tail joining protein;protein_id=WP_000259002.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 168889 170817 . - . ID=gene-AD11_RS15080;Name=AD11_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15080;old_locus_tag=AD11_2418 NZ_JJLL01000134.1 Protein Homology CDS 168889 170817 . - 0 ID=cds-WP_033865039.1;Parent=gene-AD11_RS15080;Dbxref=GenBank:WP_033865039.1;Name=WP_033865039.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310762.1;locus_tag=AD11_RS15080;product=phage terminase large subunit family protein;protein_id=WP_033865039.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 170789 171298 . - . ID=gene-AD11_RS15085;Name=AD11_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15085;old_locus_tag=AD11_2419 NZ_JJLL01000134.1 Protein Homology CDS 170789 171298 . - 0 ID=cds-WP_000235436.1;Parent=gene-AD11_RS15085;Dbxref=GenBank:WP_000235436.1;Name=WP_000235436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310763.1;locus_tag=AD11_RS15085;product=terminase small subunit;protein_id=WP_000235436.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 171753 171977 . - . ID=gene-AD11_RS15095;Name=AD11_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15095;old_locus_tag=AD11_2421 NZ_JJLL01000134.1 Protein Homology CDS 171753 171977 . - 0 ID=cds-WP_000735655.1;Parent=gene-AD11_RS15095;Dbxref=GenBank:WP_000735655.1;Name=WP_000735655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309563.1;locus_tag=AD11_RS15095;product=hypothetical protein;protein_id=WP_000735655.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 172001 172459 . - . ID=gene-AD11_RS33210;Name=AD11_RS33210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33210;old_locus_tag=AD11_2422 NZ_JJLL01000134.1 Protein Homology CDS 172001 172459 . - 0 ID=cds-WP_024185461.1;Parent=gene-AD11_RS33210;Dbxref=GenBank:WP_024185461.1;Name=WP_024185461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947133.1;locus_tag=AD11_RS33210;product=lysis protein;protein_id=WP_024185461.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 172471 172602 . - . ID=gene-AD11_RS31640;Name=AD11_RS31640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31640;old_locus_tag=AD11_2423 NZ_JJLL01000134.1 Protein Homology CDS 172471 172602 . - 0 ID=cds-WP_001280932.1;Parent=gene-AD11_RS31640;Dbxref=GenBank:WP_001280932.1;Name=WP_001280932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502641.1;locus_tag=AD11_RS31640;product=hypothetical protein;protein_id=WP_001280932.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 172617 172799 . - . ID=gene-AD11_RS30835;Name=AD11_RS30835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS30835;old_locus_tag=AD11_2424 NZ_JJLL01000134.1 Protein Homology CDS 172617 172799 . - 0 ID=cds-WP_021566721.1-2;Parent=gene-AD11_RS30835;Dbxref=GenBank:WP_021566721.1;Name=WP_021566721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310767.3;locus_tag=AD11_RS30835;product=hypothetical protein;protein_id=WP_021566721.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 172956 173489 . - . ID=gene-AD11_RS15115;Name=AD11_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15115;old_locus_tag=AD11_2425 NZ_JJLL01000134.1 Protein Homology CDS 172956 173489 . - 0 ID=cds-WP_033866460.1;Parent=gene-AD11_RS15115;Dbxref=GenBank:WP_033866460.1;Name=WP_033866460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309240.1;locus_tag=AD11_RS15115;product=lysozyme;protein_id=WP_033866460.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 173494 173709 . - . ID=gene-AD11_RS15120;Name=AD11_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15120;old_locus_tag=AD11_2426 NZ_JJLL01000134.1 Protein Homology CDS 173494 173709 . - 0 ID=cds-WP_024194161.1;Parent=gene-AD11_RS15120;Dbxref=GenBank:WP_024194161.1;Name=WP_024194161.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707874.1;locus_tag=AD11_RS15120;product=class II holin family protein;protein_id=WP_024194161.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 173786 174190 . - . ID=gene-AD11_RS15125;Name=AD11_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15125;old_locus_tag=AD11_2427 NZ_JJLL01000134.1 Protein Homology CDS 173786 174190 . - 0 ID=cds-WP_371357008.1;Parent=gene-AD11_RS15125;Dbxref=GenBank:WP_371357008.1;Name=WP_371357008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427599.1;locus_tag=AD11_RS15125;product=DUF826 domain-containing protein;protein_id=WP_371357008.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 174102 174296 . - . ID=gene-AD11_RS15130;Name=AD11_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15130 NZ_JJLL01000134.1 Protein Homology CDS 174102 174296 . - 0 ID=cds-WP_024192660.1;Parent=gene-AD11_RS15130;Dbxref=GenBank:WP_024192660.1;Name=WP_024192660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000142785.1;locus_tag=AD11_RS15130;product=DUF1378 family protein;protein_id=WP_024192660.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 174438 176411 . - . ID=gene-AD11_RS15135;Name=AD11_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15135;old_locus_tag=AD11_2429 NZ_JJLL01000134.1 Protein Homology CDS 174438 176411 . - 0 ID=cds-WP_000874521.1;Parent=gene-AD11_RS15135;Dbxref=GenBank:WP_000874521.1;Name=WP_000874521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237845.1;locus_tag=AD11_RS15135;product=SASA family carbohydrate esterase;protein_id=WP_000874521.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 177862 178476 . - . ID=gene-AD11_RS30845;Name=AD11_RS30845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS30845;old_locus_tag=AD11_2430 NZ_JJLL01000134.1 Protein Homology CDS 177862 178476 . - 0 ID=cds-WP_033866461.1;Parent=gene-AD11_RS30845;Dbxref=GenBank:WP_033866461.1;Name=WP_033866461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125643.1;locus_tag=AD11_RS30845;product=hypothetical protein;protein_id=WP_033866461.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 178476 178619 . - . ID=gene-AD11_RS33215;Name=AD11_RS33215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33215 NZ_JJLL01000134.1 Protein Homology CDS 178476 178619 . - 0 ID=cds-WP_032155250.1;Parent=gene-AD11_RS33215;Dbxref=GenBank:WP_032155250.1;Name=WP_032155250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030162.1;locus_tag=AD11_RS33215;product=hypothetical protein;protein_id=WP_032155250.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 178711 178911 . - . ID=gene-AD11_RS15150;Name=AD11_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15150 NZ_JJLL01000134.1 Protein Homology CDS 178711 178911 . - 0 ID=cds-WP_000994506.1;Parent=gene-AD11_RS15150;Dbxref=GenBank:WP_000994506.1;Name=WP_000994506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144764.1;locus_tag=AD11_RS15150;product=protein ninH;protein_id=WP_000994506.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 178908 179270 . - . ID=gene-AD11_RS15155;Name=AD11_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15155;old_locus_tag=AD11_2432 NZ_JJLL01000134.1 Protein Homology CDS 178908 179270 . - 0 ID=cds-WP_001008116.1;Parent=gene-AD11_RS15155;Dbxref=GenBank:WP_001008116.1;Name=WP_001008116.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001008184.1;locus_tag=AD11_RS15155;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_001008116.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 179267 179557 . - . ID=gene-AD11_RS15160;Name=AD11_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15160;old_locus_tag=AD11_2433 NZ_JJLL01000134.1 Protein Homology CDS 179267 179557 . - 0 ID=cds-WP_024194163.1;Parent=gene-AD11_RS15160;Dbxref=GenBank:WP_024194163.1;Name=WP_024194163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000002235.1;locus_tag=AD11_RS15160;product=DUF1364 domain-containing protein;protein_id=WP_024194163.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 179581 179772 . - . ID=gene-AD11_RS15165;Name=AD11_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15165 NZ_JJLL01000134.1 Protein Homology CDS 179581 179772 . - 0 ID=cds-WP_001254269.1;Parent=gene-AD11_RS15165;Dbxref=GenBank:WP_001254269.1;Name=WP_001254269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254268.1;locus_tag=AD11_RS15165;product=NinE family protein;protein_id=WP_001254269.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 179769 180179 . - . ID=gene-AD11_RS15170;Name=AD11_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15170;old_locus_tag=AD11_2434 NZ_JJLL01000134.1 Protein Homology CDS 179769 180179 . - 0 ID=cds-WP_001076830.1;Parent=gene-AD11_RS15170;Dbxref=GenBank:WP_001076830.1;Name=WP_001076830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966857.1;locus_tag=AD11_RS15170;product=recombination protein NinB;protein_id=WP_001076830.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 180234 180935 . - . ID=gene-AD11_RS15175;Name=AD11_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15175;old_locus_tag=AD11_2435 NZ_JJLL01000134.1 Protein Homology CDS 180234 180935 . - 0 ID=cds-WP_033865188.1;Parent=gene-AD11_RS15175;Dbxref=GenBank:WP_033865188.1;Name=WP_033865188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232082.1;locus_tag=AD11_RS15175;product=ORF6N domain-containing protein;protein_id=WP_033865188.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 181214 181396 . - . ID=gene-AD11_RS15180;Name=AD11_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15180 NZ_JJLL01000134.1 Protein Homology CDS 181214 181396 . - 0 ID=cds-WP_001254242.1;Parent=gene-AD11_RS15180;Dbxref=GenBank:WP_001254242.1;Name=WP_001254242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063117.1;locus_tag=AD11_RS15180;product=NinE family protein;protein_id=WP_001254242.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 181393 181920 . - . ID=gene-AD11_RS15185;Name=AD11_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15185;old_locus_tag=AD11_2437 NZ_JJLL01000134.1 Protein Homology CDS 181393 181920 . - 0 ID=cds-WP_000153280.1;Parent=gene-AD11_RS15185;Dbxref=GenBank:WP_000153280.1;Name=WP_000153280.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309223.1;locus_tag=AD11_RS15185;product=phage N-6-adenine-methyltransferase;protein_id=WP_000153280.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 181917 182363 . - . ID=gene-AD11_RS15190;Name=AD11_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15190;old_locus_tag=AD11_2438 NZ_JJLL01000134.1 Protein Homology CDS 181917 182363 . - 0 ID=cds-WP_001385995.1;Parent=gene-AD11_RS15190;Dbxref=GenBank:WP_001385995.1;Name=WP_001385995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309222.1;locus_tag=AD11_RS15190;product=recombination protein NinB;protein_id=WP_001385995.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 182320 182556 . - . ID=gene-AD11_RS15195;Name=AD11_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15195 NZ_JJLL01000134.1 Protein Homology CDS 182320 182556 . - 0 ID=cds-WP_001281772.1;Parent=gene-AD11_RS15195;Dbxref=GenBank:WP_001281772.1;Name=WP_001281772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309221.1;locus_tag=AD11_RS15195;product=Lar family restriction alleviation protein;protein_id=WP_001281772.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 182567 182782 . - . ID=gene-AD11_RS15200;Name=AD11_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15200;old_locus_tag=AD11_2439 NZ_JJLL01000134.1 Protein Homology CDS 182567 182782 . - 0 ID=cds-WP_000103679.1;Parent=gene-AD11_RS15200;Dbxref=GenBank:WP_000103679.1;Name=WP_000103679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309220.1;locus_tag=AD11_RS15200;product=DUF7301 family protein;protein_id=WP_000103679.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 182868 183158 . - . ID=gene-AD11_RS15205;Name=AD11_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15205 NZ_JJLL01000134.1 Protein Homology CDS 182868 183158 . - 0 ID=cds-WP_000145898.1;Parent=gene-AD11_RS15205;Dbxref=GenBank:WP_000145898.1;Name=WP_000145898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311012.1;locus_tag=AD11_RS15205;product=protein ren;protein_id=WP_000145898.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 183155 183856 . - . ID=gene-AD11_RS15210;Name=AD11_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15210;old_locus_tag=AD11_2440 NZ_JJLL01000134.1 Protein Homology CDS 183155 183856 . - 0 ID=cds-WP_000788840.1;Parent=gene-AD11_RS15210;Dbxref=GenBank:WP_000788840.1;Name=WP_000788840.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309639.1;locus_tag=AD11_RS15210;product=replication protein P;protein_id=WP_000788840.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 183853 184791 . - . ID=gene-AD11_RS15215;Name=AD11_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15215;old_locus_tag=AD11_2441 NZ_JJLL01000134.1 Protein Homology CDS 183853 184791 . - 0 ID=cds-WP_000185524.1;Parent=gene-AD11_RS15215;Dbxref=GenBank:WP_000185524.1;Name=WP_000185524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311014.1;locus_tag=AD11_RS15215;product=replication protein;protein_id=WP_000185524.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 184824 185123 . - . ID=gene-AD11_RS15220;Name=AD11_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15220;old_locus_tag=AD11_2442 NZ_JJLL01000134.1 Protein Homology CDS 184824 185123 . - 0 ID=cds-WP_000438529.1;Parent=gene-AD11_RS15220;Dbxref=GenBank:WP_000438529.1;Name=WP_000438529.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309214.1;locus_tag=AD11_RS15220;product=CII family transcriptional regulator;protein_id=WP_000438529.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 185263 185481 . - . ID=gene-AD11_RS15225;Name=AD11_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15225 NZ_JJLL01000134.1 Protein Homology CDS 185263 185481 . - 0 ID=cds-WP_001033079.1;Parent=gene-AD11_RS15225;Dbxref=GenBank:WP_001033079.1;Name=WP_001033079.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311016.1;locus_tag=AD11_RS15225;product=helix-turn-helix transcriptional regulator;protein_id=WP_001033079.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 185590 186237 . + . ID=gene-AD11_RS15230;Name=AD11_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15230 NZ_JJLL01000134.1 Protein Homology CDS 185590 186237 . + 0 ID=cds-WP_012601624.1;Parent=gene-AD11_RS15230;Dbxref=GenBank:WP_012601624.1;Name=WP_012601624.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311017.2;locus_tag=AD11_RS15230;product=LexA family protein;protein_id=WP_012601624.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 186234 186722 . + . ID=gene-AD11_RS15235;Name=AD11_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15235 NZ_JJLL01000134.1 Protein Homology CDS 186234 186722 . + 0 ID=cds-WP_012601625.1;Parent=gene-AD11_RS15235;Dbxref=GenBank:WP_012601625.1;Name=WP_012601625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012601625.1;locus_tag=AD11_RS15235;product=hypothetical protein;protein_id=WP_012601625.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 186719 187339 . + . ID=gene-AD11_RS15240;Name=AD11_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15240 NZ_JJLL01000134.1 Protein Homology CDS 186719 187339 . + 0 ID=cds-WP_001278660.1;Parent=gene-AD11_RS15240;Dbxref=GenBank:WP_001278660.1;Name=WP_001278660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278660.1;locus_tag=AD11_RS15240;product=hypothetical protein;protein_id=WP_001278660.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 187642 187867 . + . ID=gene-AD11_RS15250;Name=AD11_RS15250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS15250;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 187642 187867 . + 0 ID=cds-AD11_RS15250;Parent=gene-AD11_RS15250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502599.1;locus_tag=AD11_RS15250;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 187845 188117 . + . ID=gene-AD11_RS15255;Name=AD11_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15255 NZ_JJLL01000134.1 Protein Homology CDS 187845 188117 . + 0 ID=cds-WP_000088204.1;Parent=gene-AD11_RS15255;Dbxref=GenBank:WP_000088204.1;Name=WP_000088204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309208.1;locus_tag=AD11_RS15255;product=hypothetical protein;protein_id=WP_000088204.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 188179 188802 . + . ID=gene-AD11_RS15260;Name=AD11_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15260;old_locus_tag=AD11_2444 NZ_JJLL01000134.1 Protein Homology CDS 188179 188802 . + 0 ID=cds-WP_000095078.1;Parent=gene-AD11_RS15260;Dbxref=GenBank:WP_000095078.1;Name=WP_000095078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001597931.1;locus_tag=AD11_RS15260;product=Nmad5 family putative nucleotide modification protein;protein_id=WP_000095078.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 189027 189167 . + . ID=gene-AD11_RS31660;Name=AD11_RS31660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31660 NZ_JJLL01000134.1 Protein Homology CDS 189027 189167 . + 0 ID=cds-WP_001198858.1;Parent=gene-AD11_RS31660;Dbxref=GenBank:WP_001198858.1;Name=WP_001198858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001200014.1;locus_tag=AD11_RS31660;product=protease FtsH-inhibitory lysogeny factor CIII;protein_id=WP_001198858.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 189160 189303 . + . ID=gene-AD11_RS31665;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=AD11_RS31665;old_locus_tag=AD11_2445 NZ_JJLL01000134.1 Protein Homology CDS 189160 189303 . + 0 ID=cds-WP_000361825.1;Parent=gene-AD11_RS31665;Dbxref=GenBank:WP_000361825.1;Name=WP_000361825.1;gbkey=CDS;gene=kil;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309204.2;locus_tag=AD11_RS31665;product=host cell division inhibitory peptide Kil;protein_id=WP_000361825.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 189377 189673 . + . ID=gene-AD11_RS15275;Name=AD11_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15275;old_locus_tag=AD11_2446 NZ_JJLL01000134.1 Protein Homology CDS 189377 189673 . + 0 ID=cds-WP_000995422.1;Parent=gene-AD11_RS15275;Dbxref=GenBank:WP_000995422.1;Name=WP_000995422.1;Ontology_term=GO:0060703;gbkey=CDS;go_function=deoxyribonuclease inhibitor activity|0060703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309203.2;locus_tag=AD11_RS15275;product=host-nuclease inhibitor Gam family protein;protein_id=WP_000995422.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 189679 190464 . + . ID=gene-AD11_RS15280;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=AD11_RS15280;old_locus_tag=AD11_2447 NZ_JJLL01000134.1 Protein Homology CDS 189679 190464 . + 0 ID=cds-WP_000100847.1;Parent=gene-AD11_RS15280;Dbxref=GenBank:WP_000100847.1;Name=WP_000100847.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311028.1;locus_tag=AD11_RS15280;product=phage recombination protein Bet;protein_id=WP_000100847.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 190461 191141 . + . ID=gene-AD11_RS15285;Name=AD11_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15285;old_locus_tag=AD11_2448 NZ_JJLL01000134.1 Protein Homology CDS 190461 191141 . + 0 ID=cds-WP_000186832.1;Parent=gene-AD11_RS15285;Dbxref=GenBank:WP_000186832.1;Name=WP_000186832.1;Ontology_term=GO:0004527,GO:0046872;gbkey=CDS;go_function=exonuclease activity|0004527||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308836.1;locus_tag=AD11_RS15285;product=lambda exonuclease family protein;protein_id=WP_000186832.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 191138 191296 . + . ID=gene-AD11_RS15290;Name=AD11_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15290;old_locus_tag=AD11_2449 NZ_JJLL01000134.1 Protein Homology CDS 191138 191296 . + 0 ID=cds-WP_000682303.1;Parent=gene-AD11_RS15290;Dbxref=GenBank:WP_000682303.1;Name=WP_000682303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001598316.1;locus_tag=AD11_RS15290;product=DUF1317 family protein;protein_id=WP_000682303.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 191293 192045 . + . ID=gene-AD11_RS15295;Name=AD11_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15295;old_locus_tag=AD11_2450 NZ_JJLL01000134.1 Protein Homology CDS 191293 192045 . + 0 ID=cds-WP_000581108.1;Parent=gene-AD11_RS15295;Dbxref=GenBank:WP_000581108.1;Name=WP_000581108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964734.1;locus_tag=AD11_RS15295;product=hypothetical protein;protein_id=WP_000581108.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 192053 192268 . + . ID=gene-AD11_RS15300;Name=AD11_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15300;old_locus_tag=AD11_2451 NZ_JJLL01000134.1 Protein Homology CDS 192053 192268 . + 0 ID=cds-WP_000151207.1;Parent=gene-AD11_RS15300;Dbxref=GenBank:WP_000151207.1;Name=WP_000151207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000151206.1;locus_tag=AD11_RS15300;product=hypothetical protein;protein_id=WP_000151207.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 192367 192588 . + . ID=gene-AD11_RS15305;Name=AD11_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15305 NZ_JJLL01000134.1 Protein Homology CDS 192367 192588 . + 0 ID=cds-WP_000774248.1;Parent=gene-AD11_RS15305;Dbxref=GenBank:WP_000774248.1;Name=WP_000774248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309197.1;locus_tag=AD11_RS15305;product=TraR/DksA family transcriptional regulator;protein_id=WP_000774248.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 192585 193016 . + . ID=gene-AD11_RS15310;Name=AD11_RS15310;end_range=193016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS15310;old_locus_tag=AD11_2452;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 192585 193016 . + 0 ID=cds-AD11_RS15310;Parent=gene-AD11_RS15310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=193016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192144.1;locus_tag=AD11_RS15310;partial=true;product=ead/Ea22-like family protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 193201 193524 . + . ID=gene-AD11_RS15315;Name=AD11_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15315 NZ_JJLL01000134.1 Protein Homology CDS 193201 193524 . + 0 ID=cds-WP_000213528.1;Parent=gene-AD11_RS15315;Dbxref=GenBank:WP_000213528.1;Name=WP_000213528.1;Ontology_term=GO:0008270,GO:0046983;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213527.1;locus_tag=AD11_RS15315;product=ClpX C4-type zinc finger protein;protein_id=WP_000213528.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 193521 194042 . + . ID=gene-AD11_RS15320;Name=AD11_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15320;old_locus_tag=AD11_2453 NZ_JJLL01000134.1 Protein Homology CDS 193521 194042 . + 0 ID=cds-WP_033865622.1;Parent=gene-AD11_RS15320;Dbxref=GenBank:WP_033865622.1;Name=WP_033865622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000672511.1;locus_tag=AD11_RS15320;product=hypothetical protein;protein_id=WP_033865622.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 194044 194307 . + . ID=gene-AD11_RS15325;Name=AD11_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15325;old_locus_tag=AD11_2454 NZ_JJLL01000134.1 Protein Homology CDS 194044 194307 . + 0 ID=cds-WP_000224227.1;Parent=gene-AD11_RS15325;Dbxref=GenBank:WP_000224227.1;Name=WP_000224227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309977.1;locus_tag=AD11_RS15325;product=hypothetical protein;protein_id=WP_000224227.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 194318 194443 . + . ID=gene-AD11_RS32650;Name=AD11_RS32650;end_range=194443,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32650;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 194318 194443 . + 0 ID=cds-AD11_RS32650;Parent=gene-AD11_RS32650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=194443,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309978.1;locus_tag=AD11_RS32650;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 194465 194776 . + . ID=gene-AD11_RS32655;Name=AD11_RS32655;end_range=194776,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32655;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 194465 194776 . + 0 ID=cds-AD11_RS32655;Parent=gene-AD11_RS32655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=194776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628767.1;locus_tag=AD11_RS32655;partial=true;product=dTDP-6-deoxy-L-hexose 3-O-methyltransferase;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 194990 195220 . + . ID=gene-AD11_RS32660;Name=AD11_RS32660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32660;partial=true;pseudo=true;start_range=.,194990 NZ_JJLL01000134.1 Protein Homology CDS 194990 195220 . + 0 ID=cds-AD11_RS32660;Parent=gene-AD11_RS32660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311037.1;locus_tag=AD11_RS32660;partial=true;product=DUF551 domain-containing protein;pseudo=true;start_range=.,194990;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 195305 195547 . + . ID=gene-AD11_RS15335;Name=AD11_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15335 NZ_JJLL01000134.1 Protein Homology CDS 195305 195547 . + 0 ID=cds-WP_016232203.1;Parent=gene-AD11_RS15335;Dbxref=GenBank:WP_016232203.1;Name=WP_016232203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439258.1;locus_tag=AD11_RS15335;product=DUF4222 domain-containing protein;protein_id=WP_016232203.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 195551 195685 . + . ID=gene-AD11_RS15340;Name=AD11_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15340 NZ_JJLL01000134.1 Protein Homology CDS 195551 195685 . + 0 ID=cds-WP_001030154.1;Parent=gene-AD11_RS15340;Dbxref=GenBank:WP_001030154.1;Name=WP_001030154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502644.1;locus_tag=AD11_RS15340;product=hypothetical protein;protein_id=WP_001030154.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 195704 195958 . + . ID=gene-AD11_RS15345;Name=xisR;gbkey=Gene;gene=xisR;gene_biotype=protein_coding;locus_tag=AD11_RS15345 NZ_JJLL01000134.1 Protein Homology CDS 195704 195958 . + 0 ID=cds-WP_001193437.1;Parent=gene-AD11_RS15345;Dbxref=GenBank:WP_001193437.1;Name=WP_001193437.1;gbkey=CDS;gene=xisR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311039.1;locus_tag=AD11_RS15345;product=excisionase family protein;protein_id=WP_001193437.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 195992 197278 . + . ID=gene-AD11_RS15350;Name=AD11_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15350;old_locus_tag=AD11_2458 NZ_JJLL01000134.1 Protein Homology CDS 195992 197278 . + 0 ID=cds-WP_016232204.1;Parent=gene-AD11_RS15350;Dbxref=GenBank:WP_016232204.1;Name=WP_016232204.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311040.1;locus_tag=AD11_RS15350;product=tyrosine-type recombinase/integrase;protein_id=WP_016232204.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 197299 198000 . + . ID=gene-AD11_RS15355;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AD11_RS15355;old_locus_tag=AD11_2459 NZ_JJLL01000134.1 Protein Homology CDS 197299 198000 . + 0 ID=cds-WP_029208472.1;Parent=gene-AD11_RS15355;Dbxref=GenBank:WP_029208472.1;Name=WP_029208472.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AD11_RS15355;product=HTH-type transcriptional regulator MlrA;protein_id=WP_029208472.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 198060 198167 . + . ID=gene-AD11_RS15360;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AD11_RS15360 NZ_JJLL01000134.1 Protein Homology CDS 198060 198167 . + 0 ID=cds-WP_001216963.1;Parent=gene-AD11_RS15360;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AD11_RS15360;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 198148 198879 . - . ID=gene-AD11_RS15365;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AD11_RS15365;old_locus_tag=AD11_2460 NZ_JJLL01000134.1 Protein Homology CDS 198148 198879 . - 0 ID=cds-WP_000783120.1;Parent=gene-AD11_RS15365;Dbxref=GenBank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AD11_RS15365;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 198884 199810 . - . ID=gene-AD11_RS15370;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AD11_RS15370;old_locus_tag=AD11_2461 NZ_JJLL01000134.1 Protein Homology CDS 198884 199810 . - 0 ID=cds-WP_033865626.1;Parent=gene-AD11_RS15370;Dbxref=GenBank:WP_033865626.1;Name=WP_033865626.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311043.1;locus_tag=AD11_RS15370;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_033865626.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 199803 200960 . - . ID=gene-AD11_RS15375;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AD11_RS15375;old_locus_tag=AD11_2462 NZ_JJLL01000134.1 Protein Homology CDS 199803 200960 . - 0 ID=cds-WP_000220837.1;Parent=gene-AD11_RS15375;Dbxref=GenBank:WP_000220837.1;Name=WP_000220837.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416634.1;locus_tag=AD11_RS15375;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000220837.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 200967 201884 . - . ID=gene-AD11_RS15380;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AD11_RS15380;old_locus_tag=AD11_2463 NZ_JJLL01000134.1 Protein Homology CDS 200967 201884 . - 0 ID=cds-WP_001130308.1;Parent=gene-AD11_RS15380;Dbxref=GenBank:WP_001130308.1;Name=WP_001130308.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=AD11_RS15380;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001130308.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 202095 204392 . - . ID=gene-AD11_RS15385;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AD11_RS15385;old_locus_tag=AD11_2464 NZ_JJLL01000134.1 Protein Homology CDS 202095 204392 . - 0 ID=cds-WP_000871512.1;Parent=gene-AD11_RS15385;Dbxref=GenBank:WP_000871512.1;Name=WP_000871512.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AD11_RS15385;product=beta-glucosidase BglX;protein_id=WP_000871512.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 204588 206303 . + . ID=gene-AD11_RS15390;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AD11_RS15390;old_locus_tag=AD11_2465 NZ_JJLL01000134.1 Protein Homology CDS 204588 206303 . + 0 ID=cds-WP_000097369.1;Parent=gene-AD11_RS15390;Dbxref=GenBank:WP_000097369.1;Name=WP_000097369.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AD11_RS15390;product=D-lactate dehydrogenase;protein_id=WP_000097369.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 206341 207273 . - . ID=gene-AD11_RS15395;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AD11_RS15395;old_locus_tag=AD11_2466 NZ_JJLL01000134.1 Protein Homology CDS 206341 207273 . - 0 ID=cds-WP_032177483.1;Parent=gene-AD11_RS15395;Dbxref=GenBank:WP_032177483.1;Name=WP_032177483.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311048.2;locus_tag=AD11_RS15395;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_032177483.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 207447 208034 . - . ID=gene-AD11_RS15400;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AD11_RS15400;old_locus_tag=AD11_2467 NZ_JJLL01000134.1 Protein Homology CDS 207447 208034 . - 0 ID=cds-WP_001295454.1;Parent=gene-AD11_RS15400;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AD11_RS15400;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 208204 208782 . + . ID=gene-AD11_RS15405;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AD11_RS15405;old_locus_tag=AD11_2468 NZ_JJLL01000134.1 Protein Homology CDS 208204 208782 . + 0 ID=cds-WP_001300768.1;Parent=gene-AD11_RS15405;Dbxref=GenBank:WP_001300768.1;Name=WP_001300768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AD11_RS15405;product=DedA family protein;protein_id=WP_001300768.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 208912 209673 . - . ID=gene-AD11_RS15410;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AD11_RS15410;old_locus_tag=AD11_2469 NZ_JJLL01000134.1 Protein Homology CDS 208912 209673 . - 0 ID=cds-WP_000079538.1;Parent=gene-AD11_RS15410;Dbxref=GenBank:WP_000079538.1;Name=WP_000079538.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416641.1;locus_tag=AD11_RS15410;product=SDR family oxidoreductase;protein_id=WP_000079538.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 209726 211162 . - . ID=gene-AD11_RS15415;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AD11_RS15415;old_locus_tag=AD11_2470 NZ_JJLL01000134.1 Protein Homology CDS 209726 211162 . - 0 ID=cds-WP_001078139.1;Parent=gene-AD11_RS15415;Dbxref=GenBank:WP_001078139.1;Name=WP_001078139.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AD11_RS15415;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001078139.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 211386 211469 . + . ID=gene-AD11_RS15420;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AD11_RS15420 NZ_JJLL01000134.1 Protein Homology CDS 211386 211469 . + 0 ID=cds-WP_000691708.1;Parent=gene-AD11_RS15420;Dbxref=GenBank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AD11_RS15420;product=small membrane protein YohP;protein_id=WP_000691708.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 211842 212789 . - . ID=gene-AD11_RS15425;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AD11_RS15425;old_locus_tag=AD11_2471 NZ_JJLL01000134.1 Protein Homology CDS 211842 212789 . - 0 ID=cds-WP_001264861.1;Parent=gene-AD11_RS15425;Dbxref=GenBank:WP_001264861.1;Name=WP_001264861.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416645.1;locus_tag=AD11_RS15425;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264861.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 213028 213426 . + . ID=gene-AD11_RS15430;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AD11_RS15430;old_locus_tag=AD11_2472 NZ_JJLL01000134.1 Protein Homology CDS 213028 213426 . + 0 ID=cds-WP_001295452.1;Parent=gene-AD11_RS15430;Dbxref=GenBank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416646.1;locus_tag=AD11_RS15430;product=CidA/LrgA family protein;protein_id=WP_001295452.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 213423 214118 . + . ID=gene-AD11_RS15435;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AD11_RS15435;old_locus_tag=AD11_2473 NZ_JJLL01000134.1 Protein Homology CDS 213423 214118 . + 0 ID=cds-WP_000968208.1;Parent=gene-AD11_RS15435;Dbxref=GenBank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AD11_RS15435;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 214248 215132 . + . ID=gene-AD11_RS15440;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AD11_RS15440;old_locus_tag=AD11_2474 NZ_JJLL01000134.1 Protein Homology CDS 214248 215132 . + 0 ID=cds-WP_000553555.1;Parent=gene-AD11_RS15440;Dbxref=GenBank:WP_000553555.1;Name=WP_000553555.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AD11_RS15440;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 215282 216001 . + . ID=gene-AD11_RS15445;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AD11_RS15445;old_locus_tag=AD11_2475 NZ_JJLL01000134.1 Protein Homology CDS 215282 216001 . + 0 ID=cds-WP_000920063.1;Parent=gene-AD11_RS15445;Dbxref=GenBank:WP_000920063.1;Name=WP_000920063.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AD11_RS15445;product=outer membrane permeability protein SanA;protein_id=WP_000920063.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 216004 216243 . + . ID=gene-AD11_RS15450;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AD11_RS15450;old_locus_tag=AD11_2476 NZ_JJLL01000134.1 Protein Homology CDS 216004 216243 . + 0 ID=cds-WP_001400653.1;Parent=gene-AD11_RS15450;Dbxref=GenBank:WP_001400653.1;Name=WP_001400653.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AD11_RS15450;product=DUF2542 family protein;protein_id=WP_001400653.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 216562 217800 . + . ID=gene-AD11_RS15455;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AD11_RS15455;old_locus_tag=AD11_2477 NZ_JJLL01000134.1 Protein Homology CDS 216562 217800 . + 0 ID=cds-WP_021547055.1;Parent=gene-AD11_RS15455;Dbxref=GenBank:WP_021547055.1;Name=WP_021547055.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AD11_RS15455;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_021547055.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 217794 219029 . + . ID=gene-AD11_RS15460;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AD11_RS15460;old_locus_tag=AD11_2478 NZ_JJLL01000134.1 Protein Homology CDS 217794 219029 . + 0 ID=cds-WP_033865627.1;Parent=gene-AD11_RS15460;Dbxref=GenBank:WP_033865627.1;Name=WP_033865627.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AD11_RS15460;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_033865627.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 219156 220166 . - . ID=gene-AD11_RS15465;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AD11_RS15465;old_locus_tag=AD11_2479 NZ_JJLL01000134.1 Protein Homology CDS 219156 220166 . - 0 ID=cds-WP_001275118.1;Parent=gene-AD11_RS15465;Dbxref=GenBank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AD11_RS15465;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 220182 221702 . - . ID=gene-AD11_RS15470;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AD11_RS15470;old_locus_tag=AD11_2480 NZ_JJLL01000134.1 Protein Homology CDS 220182 221702 . - 0 ID=cds-WP_032083519.1;Parent=gene-AD11_RS15470;Dbxref=GenBank:WP_032083519.1;Name=WP_032083519.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AD11_RS15470;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_032083519.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 221763 222761 . - . ID=gene-AD11_RS15475;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AD11_RS15475;old_locus_tag=AD11_2481 NZ_JJLL01000134.1 Protein Homology CDS 221763 222761 . - 0 ID=cds-WP_001036964.1;Parent=gene-AD11_RS15475;Dbxref=GenBank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AD11_RS15475;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 223041 224081 . - . ID=gene-AD11_RS15480;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AD11_RS15480;old_locus_tag=AD11_2482 NZ_JJLL01000134.1 Protein Homology CDS 223041 224081 . - 0 ID=cds-WP_000628659.1;Parent=gene-AD11_RS15480;Dbxref=GenBank:WP_000628659.1;Name=WP_000628659.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=AD11_RS15480;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628659.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 224223 225380 . - . ID=gene-AD11_RS15490;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AD11_RS15490;old_locus_tag=AD11_2483 NZ_JJLL01000134.1 Protein Homology CDS 224223 225380 . - 0 ID=cds-WP_000440920.1;Parent=gene-AD11_RS15490;Dbxref=GenBank:WP_000440920.1;Name=WP_000440920.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311071.1;locus_tag=AD11_RS15490;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440920.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 225397 226065 . - . ID=gene-AD11_RS15495;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AD11_RS15495;old_locus_tag=AD11_2484 NZ_JJLL01000134.1 Protein Homology CDS 225397 226065 . - 0 ID=cds-WP_001139613.1;Parent=gene-AD11_RS15495;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AD11_RS15495;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 226323 227159 . + . ID=gene-AD11_RS15505;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AD11_RS15505;old_locus_tag=AD11_2485 NZ_JJLL01000134.1 Protein Homology CDS 226323 227159 . + 0 ID=cds-WP_000425438.1;Parent=gene-AD11_RS15505;Dbxref=GenBank:WP_000425438.1;Name=WP_000425438.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416659.1;locus_tag=AD11_RS15505;product=S-formylglutathione hydrolase;protein_id=WP_000425438.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 227191 229181 . - . ID=gene-AD11_RS15510;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=pseudogene;locus_tag=AD11_RS15510;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 227191 229181 . - 0 ID=cds-AD11_RS15510;Parent=gene-AD11_RS15510;Note=frameshifted;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AD11_RS15510;product=catecholate siderophore receptor CirA;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 229474 230943 . - . ID=gene-AD11_RS15520;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AD11_RS15520;old_locus_tag=AD11_2488 NZ_JJLL01000134.1 Protein Homology CDS 229474 230943 . - 0 ID=cds-WP_000253273.1;Parent=gene-AD11_RS15520;Dbxref=GenBank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AD11_RS15520;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 231148 232029 . - . ID=gene-AD11_RS15525;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AD11_RS15525;old_locus_tag=AD11_2490 NZ_JJLL01000134.1 Protein Homology CDS 231148 232029 . - 0 ID=cds-WP_000548294.1;Parent=gene-AD11_RS15525;Dbxref=GenBank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AD11_RS15525;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 232128 233177 . + . ID=gene-AD11_RS15530;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AD11_RS15530;old_locus_tag=AD11_2491 NZ_JJLL01000134.1 Protein Homology CDS 232128 233177 . + 0 ID=cds-WP_000182053.1;Parent=gene-AD11_RS15530;Dbxref=GenBank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AD11_RS15530;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 233251 234108 . + . ID=gene-AD11_RS15535;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AD11_RS15535;old_locus_tag=AD11_2492 NZ_JJLL01000134.1 Protein Homology CDS 233251 234108 . + 0 ID=cds-WP_032181655.1;Parent=gene-AD11_RS15535;Dbxref=GenBank:WP_032181655.1;Name=WP_032181655.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AD11_RS15535;product=deoxyribonuclease IV;protein_id=WP_032181655.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 234111 235199 . + . ID=gene-AD11_RS15540;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AD11_RS15540;old_locus_tag=AD11_2493 NZ_JJLL01000134.1 Protein Homology CDS 234111 235199 . + 0 ID=cds-WP_001064976.1;Parent=gene-AD11_RS15540;Dbxref=GenBank:WP_001064976.1;Name=WP_001064976.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708057.1;locus_tag=AD11_RS15540;product=sugar kinase;protein_id=WP_001064976.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 235306 236556 . - . ID=gene-AD11_RS15545;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;locus_tag=AD11_RS15545;old_locus_tag=AD11_2494 NZ_JJLL01000134.1 Protein Homology CDS 235306 236556 . - 0 ID=cds-WP_032083517.1;Parent=gene-AD11_RS15545;Dbxref=GenBank:WP_032083517.1;Name=WP_032083517.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=nupX;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AD11_RS15545;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_032083517.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 236656 237597 . - . ID=gene-AD11_RS15550;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AD11_RS15550;old_locus_tag=AD11_2495 NZ_JJLL01000134.1 Protein Homology CDS 236656 237597 . - 0 ID=cds-WP_000415429.1;Parent=gene-AD11_RS15550;Dbxref=GenBank:WP_000415429.1;Name=WP_000415429.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AD11_RS15550;product=ribosylpyrimidine nucleosidase;protein_id=WP_000415429.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 237727 238425 . + . ID=gene-AD11_RS15555;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AD11_RS15555;old_locus_tag=AD11_2496 NZ_JJLL01000134.1 Protein Homology CDS 237727 238425 . + 0 ID=cds-WP_000658575.1;Parent=gene-AD11_RS15555;Dbxref=GenBank:WP_000658575.1;Name=WP_000658575.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AD11_RS15555;product=transcriptional regulator YeiL;protein_id=WP_000658575.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 238496 239746 . - . ID=gene-AD11_RS15560;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=AD11_RS15560;old_locus_tag=AD11_2497 NZ_JJLL01000134.1 Protein Homology CDS 238496 239746 . - 0 ID=cds-WP_000353878.1;Parent=gene-AD11_RS15560;Dbxref=GenBank:WP_000353878.1;Name=WP_000353878.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=psuT;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AD11_RS15560;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353878.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 239840 240778 . - . ID=gene-AD11_RS15565;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AD11_RS15565;old_locus_tag=AD11_2498 NZ_JJLL01000134.1 Protein Homology CDS 239840 240778 . - 0 ID=cds-WP_001292454.1;Parent=gene-AD11_RS15565;Dbxref=GenBank:WP_001292454.1;Name=WP_001292454.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311084.1;locus_tag=AD11_RS15565;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292454.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 240766 241707 . - . ID=gene-AD11_RS15570;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AD11_RS15570;old_locus_tag=AD11_2499 NZ_JJLL01000134.1 Protein Homology CDS 240766 241707 . - 0 ID=cds-WP_001208138.1;Parent=gene-AD11_RS15570;Dbxref=GenBank:WP_001208138.1;Name=WP_001208138.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416671.1;locus_tag=AD11_RS15570;product=pseudouridine kinase;protein_id=WP_001208138.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 242131 243822 . - . ID=gene-AD11_RS15575;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AD11_RS15575;old_locus_tag=AD11_2500 NZ_JJLL01000134.1 Protein Homology CDS 242131 243822 . - 0 ID=cds-WP_000854439.1;Parent=gene-AD11_RS15575;Dbxref=GenBank:WP_000854439.1;Name=WP_000854439.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311086.1;locus_tag=AD11_RS15575;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854439.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 243839 244777 . - . ID=gene-AD11_RS15580;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AD11_RS15580;old_locus_tag=AD11_2501 NZ_JJLL01000134.1 Protein Homology CDS 243839 244777 . - 0 ID=cds-WP_000091263.1;Parent=gene-AD11_RS15580;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AD11_RS15580;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 244777 245907 . - . ID=gene-AD11_RS15585;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AD11_RS15585;old_locus_tag=AD11_2502 NZ_JJLL01000134.1 Protein Homology CDS 244777 245907 . - 0 ID=cds-WP_000487246.1;Parent=gene-AD11_RS15585;Dbxref=GenBank:WP_000487246.1;Name=WP_000487246.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AD11_RS15585;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487246.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 246275 247456 . + . ID=gene-AD11_RS15590;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=AD11_RS15590;old_locus_tag=AD11_2504 NZ_JJLL01000134.1 Protein Homology CDS 246275 247456 . + 0 ID=cds-WP_000551969.1;Parent=gene-AD11_RS15590;Dbxref=GenBank:WP_000551969.1;Name=WP_000551969.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416675.1;locus_tag=AD11_RS15590;product=sugar efflux transporter SetB;protein_id=WP_000551969.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 247453 247707 . - . ID=gene-AD11_RS15595;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AD11_RS15595;old_locus_tag=AD11_2505 NZ_JJLL01000134.1 Protein Homology CDS 247453 247707 . - 0 ID=cds-WP_000389030.1;Parent=gene-AD11_RS15595;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0051536;gbkey=CDS;gene=yeiW;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AD11_RS15595;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 247862 248434 . + . ID=gene-AD11_RS15600;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AD11_RS15600;old_locus_tag=AD11_2507 NZ_JJLL01000134.1 Protein Homology CDS 247862 248434 . + 0 ID=cds-WP_001136827.1;Parent=gene-AD11_RS15600;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AD11_RS15600;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 248657 250123 . + . ID=gene-AD11_RS15605;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AD11_RS15605;old_locus_tag=AD11_2508 NZ_JJLL01000134.1 Protein Homology CDS 248657 250123 . + 0 ID=cds-WP_001091940.1;Parent=gene-AD11_RS15605;Dbxref=GenBank:WP_001091940.1;Name=WP_001091940.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AD11_RS15605;product=mannitol dehydrogenase family protein;protein_id=WP_001091940.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 250241 251227 . + . ID=gene-AD11_RS15610;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AD11_RS15610;old_locus_tag=AD11_2509 NZ_JJLL01000134.1 Protein Homology CDS 250241 251227 . + 0 ID=cds-WP_000198828.1;Parent=gene-AD11_RS15610;Dbxref=GenBank:WP_000198828.1;Name=WP_000198828.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416678.1;locus_tag=AD11_RS15610;product=zinc-binding GTPase YeiR;protein_id=WP_000198828.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 251266 251979 . + . ID=gene-AD11_RS15615;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AD11_RS15615;old_locus_tag=AD11_2510 NZ_JJLL01000134.1 Protein Homology CDS 251266 251979 . + 0 ID=cds-WP_000594599.1;Parent=gene-AD11_RS15615;Dbxref=GenBank:WP_000594599.1;Name=WP_000594599.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AD11_RS15615;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_000594599.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 252391 252957 . + . ID=gene-AD11_RS15620;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AD11_RS15620;old_locus_tag=AD11_2511 NZ_JJLL01000134.1 Protein Homology CDS 252391 252957 . + 0 ID=cds-WP_000241011.1;Parent=gene-AD11_RS15620;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AD11_RS15620;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 253138 254694 . + . ID=gene-AD11_RS15625;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AD11_RS15625;old_locus_tag=AD11_2512 NZ_JJLL01000134.1 Protein Homology CDS 253138 254694 . + 0 ID=cds-WP_033865628.1;Parent=gene-AD11_RS15625;Dbxref=GenBank:WP_033865628.1;Name=WP_033865628.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AD11_RS15625;product=cyclic di-GMP phosphodiesterase;protein_id=WP_033865628.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 254776 256590 . + . ID=gene-AD11_RS15630;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AD11_RS15630;old_locus_tag=AD11_2513 NZ_JJLL01000134.1 Protein Homology CDS 254776 256590 . + 0 ID=cds-WP_000637046.1;Parent=gene-AD11_RS15630;Dbxref=GenBank:WP_000637046.1;Name=WP_000637046.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AD11_RS15630;product=extracellular solute-binding protein;protein_id=WP_000637046.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 256591 257685 . + . ID=gene-AD11_RS15635;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AD11_RS15635;old_locus_tag=AD11_2514 NZ_JJLL01000134.1 Protein Homology CDS 256591 257685 . + 0 ID=cds-WP_000501604.1;Parent=gene-AD11_RS15635;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AD11_RS15635;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 257685 258710 . + . ID=gene-AD11_RS15640;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AD11_RS15640;old_locus_tag=AD11_2515 NZ_JJLL01000134.1 Protein Homology CDS 257685 258710 . + 0 ID=cds-WP_000088916.1;Parent=gene-AD11_RS15640;Dbxref=GenBank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AD11_RS15640;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 258712 260301 . + . ID=gene-AD11_RS15645;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AD11_RS15645;old_locus_tag=AD11_2516 NZ_JJLL01000134.1 Protein Homology CDS 258712 260301 . + 0 ID=cds-WP_033865630.1;Parent=gene-AD11_RS15645;Dbxref=GenBank:WP_033865630.1;Name=WP_033865630.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AD11_RS15645;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_033865630.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 260305 260649 . - . ID=gene-AD11_RS15650;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AD11_RS15650;old_locus_tag=AD11_2517 NZ_JJLL01000134.1 Protein Homology CDS 260305 260649 . - 0 ID=cds-WP_033865631.1;Parent=gene-AD11_RS15650;Dbxref=GenBank:WP_033865631.1;Name=WP_033865631.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AD11_RS15650;product=YejG family protein;protein_id=WP_033865631.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 260982 262172 . - . ID=gene-AD11_RS15655;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AD11_RS15655;old_locus_tag=AD11_2518 NZ_JJLL01000134.1 Protein Homology CDS 260982 262172 . - 0 ID=cds-WP_000213361.1;Parent=gene-AD11_RS15655;Dbxref=GenBank:WP_000213361.1;Name=WP_000213361.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416687.1;locus_tag=AD11_RS15655;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213361.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 262200 262895 . - . ID=gene-AD11_RS15660;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AD11_RS15660;old_locus_tag=AD11_2519 NZ_JJLL01000134.1 Protein Homology CDS 262200 262895 . - 0 ID=cds-WP_001234850.1;Parent=gene-AD11_RS15660;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AD11_RS15660;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 263044 264804 . + . ID=gene-AD11_RS15665;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AD11_RS15665;old_locus_tag=AD11_2520 NZ_JJLL01000134.1 Protein Homology CDS 263044 264804 . + 0 ID=cds-WP_000578061.1;Parent=gene-AD11_RS15665;Dbxref=GenBank:WP_000578061.1;Name=WP_000578061.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416689.1;locus_tag=AD11_RS15665;product=DEAD/DEAH box helicase;protein_id=WP_000578061.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 264929 265213 . + . ID=gene-AD11_RS15670;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AD11_RS15670;old_locus_tag=AD11_2521 NZ_JJLL01000134.1 Protein Homology CDS 264929 265213 . + 0 ID=cds-WP_000494183.1;Parent=gene-AD11_RS15670;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AD11_RS15670;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 265352 266359 . - . ID=gene-AD11_RS15675;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AD11_RS15675;old_locus_tag=AD11_2522 NZ_JJLL01000134.1 Protein Homology CDS 265352 266359 . - 0 ID=cds-WP_000050793.1;Parent=gene-AD11_RS15675;Dbxref=GenBank:WP_000050793.1;Name=WP_000050793.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416691.1;locus_tag=AD11_RS15675;product=nucleoid-associated protein YejK;protein_id=WP_000050793.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 266541 266768 . + . ID=gene-AD11_RS15680;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AD11_RS15680;old_locus_tag=AD11_2524 NZ_JJLL01000134.1 Protein Homology CDS 266541 266768 . + 0 ID=cds-WP_001135667.1;Parent=gene-AD11_RS15680;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AD11_RS15680;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 266788 268548 . + . ID=gene-AD11_RS15685;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AD11_RS15685;old_locus_tag=AD11_2525 NZ_JJLL01000134.1 Protein Homology CDS 266788 268548 . + 0 ID=cds-WP_000256203.1;Parent=gene-AD11_RS15685;Dbxref=GenBank:WP_000256203.1;Name=WP_000256203.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AD11_RS15685;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_000256203.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 268623 268699 . + . ID=gene-AD11_RS15690;Name=AD11_RS15690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS15690;old_locus_tag=AD11_2526 NZ_JJLL01000134.1 tRNAscan-SE tRNA 268623 268699 . + . ID=rna-AD11_RS15690;Parent=gene-AD11_RS15690;anticodon=(pos:268657..268659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS15690;product=tRNA-Pro NZ_JJLL01000134.1 tRNAscan-SE exon 268623 268699 . + . ID=exon-AD11_RS15690-1;Parent=rna-AD11_RS15690;anticodon=(pos:268657..268659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS15690;product=tRNA-Pro NZ_JJLL01000134.1 RefSeq gene 268802 271393 . - . ID=gene-AD11_RS15695;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=protein_coding;locus_tag=AD11_RS15695;old_locus_tag=AD11_2527 NZ_JJLL01000134.1 Protein Homology CDS 268802 271393 . - 0 ID=cds-WP_051577951.1;Parent=gene-AD11_RS15695;Dbxref=GenBank:WP_051577951.1;Name=WP_051577951.1;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AD11_RS15695;product=autotransporter YejO;protein_id=WP_051577951.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 271713 272360 . + . ID=gene-AD11_RS15705;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AD11_RS15705;old_locus_tag=AD11_2528 NZ_JJLL01000134.1 Protein Homology CDS 271713 272360 . + 0 ID=cds-WP_001113637.1;Parent=gene-AD11_RS15705;Dbxref=GenBank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AD11_RS15705;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 272571 273623 . - . ID=gene-AD11_RS15710;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AD11_RS15710;old_locus_tag=AD11_2529 NZ_JJLL01000134.1 Protein Homology CDS 272571 273623 . - 0 ID=cds-WP_001211575.1;Parent=gene-AD11_RS15710;Dbxref=GenBank:WP_001211575.1;Name=WP_001211575.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AD11_RS15710;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211575.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 273620 274177 . - . ID=gene-AD11_RS15715;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AD11_RS15715;old_locus_tag=AD11_2530 NZ_JJLL01000134.1 Protein Homology CDS 273620 274177 . - 0 ID=cds-WP_000824439.1;Parent=gene-AD11_RS15715;Dbxref=GenBank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AD11_RS15715;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 274174 276117 . - . ID=gene-AD11_RS15720;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AD11_RS15720;old_locus_tag=AD11_2531 NZ_JJLL01000134.1 Protein Homology CDS 274174 276117 . - 0 ID=cds-WP_000982447.1;Parent=gene-AD11_RS15720;Dbxref=GenBank:WP_000982447.1;Name=WP_000982447.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416700.1;locus_tag=AD11_RS15720;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982447.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 276114 276593 . - . ID=gene-AD11_RS15725;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AD11_RS15725;old_locus_tag=AD11_2532 NZ_JJLL01000134.1 Protein Homology CDS 276114 276593 . - 0 ID=cds-WP_001026418.1;Parent=gene-AD11_RS15725;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AD11_RS15725;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 276590 276799 . - . ID=gene-AD11_RS15730;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AD11_RS15730;old_locus_tag=AD11_2533 NZ_JJLL01000134.1 Protein Homology CDS 276590 276799 . - 0 ID=cds-WP_000186540.1;Parent=gene-AD11_RS15730;Dbxref=GenBank:WP_000186540.1;Name=WP_000186540.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AD11_RS15730;product=heme exporter protein CcmD;protein_id=WP_000186540.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 276796 277533 . - . ID=gene-AD11_RS15735;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AD11_RS15735;old_locus_tag=AD11_2534 NZ_JJLL01000134.1 Protein Homology CDS 276796 277533 . - 0 ID=cds-WP_001295447.1;Parent=gene-AD11_RS15735;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AD11_RS15735;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 277575 278237 . - . ID=gene-AD11_RS15740;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AD11_RS15740;old_locus_tag=AD11_2535 NZ_JJLL01000134.1 Protein Homology CDS 277575 278237 . - 0 ID=cds-WP_000971730.1;Parent=gene-AD11_RS15740;Dbxref=GenBank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AD11_RS15740;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 278234 278857 . - . ID=gene-AD11_RS15745;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AD11_RS15745;old_locus_tag=AD11_2536 NZ_JJLL01000134.1 Protein Homology CDS 278234 278857 . - 0 ID=cds-WP_000525587.1;Parent=gene-AD11_RS15745;Dbxref=GenBank:WP_000525587.1;Name=WP_000525587.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AD11_RS15745;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_000525587.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 278870 279472 . - . ID=gene-AD11_RS15750;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AD11_RS15750;old_locus_tag=AD11_2537 NZ_JJLL01000134.1 Protein Homology CDS 278870 279472 . - 0 ID=cds-WP_000528376.1;Parent=gene-AD11_RS15750;Dbxref=GenBank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AD11_RS15750;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 279482 279931 . - . ID=gene-AD11_RS15755;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AD11_RS15755;old_locus_tag=AD11_2538 NZ_JJLL01000134.1 Protein Homology CDS 279482 279931 . - 0 ID=cds-WP_000835174.1;Parent=gene-AD11_RS15755;Dbxref=GenBank:WP_000835174.1;Name=WP_000835174.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AD11_RS15755;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835174.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 279928 280791 . - . ID=gene-AD11_RS15760;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AD11_RS15760;old_locus_tag=AD11_2539 NZ_JJLL01000134.1 Protein Homology CDS 279928 280791 . - 0 ID=cds-WP_000013515.1;Parent=gene-AD11_RS15760;Dbxref=GenBank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AD11_RS15760;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 280778 281473 . - . ID=gene-AD11_RS15765;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AD11_RS15765;old_locus_tag=AD11_2540 NZ_JJLL01000134.1 Protein Homology CDS 280778 281473 . - 0 ID=cds-WP_000091291.1;Parent=gene-AD11_RS15765;Dbxref=GenBank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AD11_RS15765;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 281480 283966 . - . ID=gene-AD11_RS15770;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AD11_RS15770;old_locus_tag=AD11_2541 NZ_JJLL01000134.1 Protein Homology CDS 281480 283966 . - 0 ID=cds-WP_000778061.1;Parent=gene-AD11_RS15770;Dbxref=GenBank:WP_000778061.1;Name=WP_000778061.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416710.1;locus_tag=AD11_RS15770;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_000778061.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 283963 284226 . - . ID=gene-AD11_RS15775;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AD11_RS15775;old_locus_tag=AD11_2542 NZ_JJLL01000134.1 Protein Homology CDS 283963 284226 . - 0 ID=cds-WP_000557378.1;Parent=gene-AD11_RS15775;Dbxref=GenBank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AD11_RS15775;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 284216 284710 . - . ID=gene-AD11_RS15780;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AD11_RS15780;old_locus_tag=AD11_2543 NZ_JJLL01000134.1 Protein Homology CDS 284216 284710 . - 0 ID=cds-WP_000686735.1;Parent=gene-AD11_RS15780;Dbxref=GenBank:WP_000686735.1;Name=WP_000686735.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AD11_RS15780;product=ferredoxin-type protein NapF;protein_id=WP_000686735.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 284819 284983 . + . ID=gene-AD11_RS32905;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=AD11_RS32905;old_locus_tag=AD11_2544 NZ_JJLL01000134.1 Protein Homology CDS 284819 284983 . + 0 ID=cds-WP_001298786.1;Parent=gene-AD11_RS32905;Dbxref=GenBank:WP_001298786.1;Name=WP_001298786.1;gbkey=CDS;gene=yojO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AD11_RS32905;product=protein YojO;protein_id=WP_001298786.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 285097 285606 . + . ID=gene-AD11_RS15790;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AD11_RS15790;old_locus_tag=AD11_2545 NZ_JJLL01000134.1 Protein Homology CDS 285097 285606 . + 0 ID=cds-WP_282916026.1;Parent=gene-AD11_RS15790;Dbxref=GenBank:WP_282916026.1;Name=WP_282916026.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785302.1;locus_tag=AD11_RS15790;product=serine protease inhibitor ecotin;protein_id=WP_282916026.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 285994 287640 . - . ID=gene-AD11_RS15795;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AD11_RS15795;old_locus_tag=AD11_2546 NZ_JJLL01000134.1 Protein Homology CDS 285994 287640 . - 0 ID=cds-WP_000758073.1;Parent=gene-AD11_RS15795;Dbxref=GenBank:WP_000758073.1;Name=WP_000758073.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=AD11_RS15795;product=malate dehydrogenase (quinone);protein_id=WP_000758073.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 287858 289501 . - . ID=gene-AD11_RS15800;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AD11_RS15800;old_locus_tag=AD11_2547 NZ_JJLL01000134.1 Protein Homology CDS 287858 289501 . - 0 ID=cds-WP_033865633.1;Parent=gene-AD11_RS15800;Dbxref=GenBank:WP_033865633.1;Name=WP_033865633.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AD11_RS15800;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_033865633.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 289577 290227 . - . ID=gene-AD11_RS15805;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AD11_RS15805;old_locus_tag=AD11_2548 NZ_JJLL01000134.1 Protein Homology CDS 289577 290227 . - 0 ID=cds-WP_000885006.1;Parent=gene-AD11_RS15805;Dbxref=GenBank:WP_000885006.1;Name=WP_000885006.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=AD11_RS15805;product=DNA oxidative demethylase AlkB;protein_id=WP_000885006.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 290227 291291 . - . ID=gene-AD11_RS15810;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AD11_RS15810;old_locus_tag=AD11_2549 NZ_JJLL01000134.1 Protein Homology CDS 290227 291291 . - 0 ID=cds-WP_000710372.1;Parent=gene-AD11_RS15810;Dbxref=GenBank:WP_000710372.1;Name=WP_000710372.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708108.1;locus_tag=AD11_RS15810;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_000710372.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 291365 292420 . - . ID=gene-AD11_RS15815;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AD11_RS15815;old_locus_tag=AD11_2550 NZ_JJLL01000134.1 Protein Homology CDS 291365 292420 . - 0 ID=cds-WP_000406085.1;Parent=gene-AD11_RS15815;Dbxref=GenBank:WP_000406085.1;Name=WP_000406085.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708109.1;locus_tag=AD11_RS15815;product=FAD:protein FMN transferase ApbE;protein_id=WP_000406085.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 292532 293662 . - . ID=gene-AD11_RS15820;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AD11_RS15820;old_locus_tag=AD11_2551 NZ_JJLL01000134.1 Protein Homology CDS 292532 293662 . - 0 ID=cds-WP_000865600.1;Parent=gene-AD11_RS15820;Dbxref=GenBank:WP_000865600.1;Name=WP_000865600.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311131.1;locus_tag=AD11_RS15820;product=porin OmpC;protein_id=WP_000865600.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 294401 297073 . + . ID=gene-AD11_RS15835;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AD11_RS15835;old_locus_tag=AD11_2552 NZ_JJLL01000134.1 Protein Homology CDS 294401 297073 . + 0 ID=cds-WP_001249081.1;Parent=gene-AD11_RS15835;Dbxref=GenBank:WP_001249081.1;Name=WP_001249081.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416720.1;locus_tag=AD11_RS15835;product=phosphotransferase RcsD;protein_id=WP_001249081.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 297090 297740 . + . ID=gene-AD11_RS15840;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AD11_RS15840;old_locus_tag=AD11_2553 NZ_JJLL01000134.1 Protein Homology CDS 297090 297740 . + 0 ID=cds-WP_001061917.1;Parent=gene-AD11_RS15840;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AD11_RS15840;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 297940 300789 . - . ID=gene-AD11_RS15845;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AD11_RS15845;old_locus_tag=AD11_2554 NZ_JJLL01000134.1 Protein Homology CDS 297940 300789 . - 0 ID=cds-WP_000876011.1;Parent=gene-AD11_RS15845;Dbxref=GenBank:WP_000876011.1;Name=WP_000876011.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AD11_RS15845;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876011.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 300956 302782 . + . ID=gene-AD11_RS15850;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AD11_RS15850;old_locus_tag=AD11_2555 NZ_JJLL01000134.1 Protein Homology CDS 300956 302782 . + 0 ID=cds-WP_000559135.1;Parent=gene-AD11_RS15850;Dbxref=GenBank:WP_000559135.1;Name=WP_000559135.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AD11_RS15850;product=two-component system sensor histidine kinase AtoS;protein_id=WP_000559135.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 302779 304164 . + . ID=gene-AD11_RS15855;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AD11_RS15855;old_locus_tag=AD11_2556 NZ_JJLL01000134.1 Protein Homology CDS 302779 304164 . + 0 ID=cds-WP_000125290.1;Parent=gene-AD11_RS15855;Dbxref=GenBank:WP_000125290.1;Name=WP_000125290.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AD11_RS15855;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_000125290.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 304360 305022 . + . ID=gene-AD11_RS15860;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AD11_RS15860;old_locus_tag=AD11_2557 NZ_JJLL01000134.1 Protein Homology CDS 304360 305022 . + 0 ID=cds-WP_000850540.1;Parent=gene-AD11_RS15860;Dbxref=GenBank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AD11_RS15860;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 305022 305672 . + . ID=gene-AD11_RS15865;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;locus_tag=AD11_RS15865;old_locus_tag=AD11_2558 NZ_JJLL01000134.1 Protein Homology CDS 305022 305672 . + 0 ID=cds-WP_000339065.1;Parent=gene-AD11_RS15865;Dbxref=GenBank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;gene=atoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AD11_RS15865;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 305669 306991 . + . ID=gene-AD11_RS15870;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;locus_tag=AD11_RS15870;old_locus_tag=AD11_2559 NZ_JJLL01000134.1 Protein Homology CDS 305669 306991 . + 0 ID=cds-WP_000580275.1;Parent=gene-AD11_RS15870;Dbxref=GenBank:WP_000580275.1;Name=WP_000580275.1;gbkey=CDS;gene=atoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AD11_RS15870;product=TIGR00366 family protein;protein_id=WP_000580275.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 307022 308206 . + . ID=gene-AD11_RS15875;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AD11_RS15875;old_locus_tag=AD11_2560 NZ_JJLL01000134.1 Protein Homology CDS 307022 308206 . + 0 ID=cds-WP_033865634.1;Parent=gene-AD11_RS15875;Dbxref=GenBank:WP_033865634.1;Name=WP_033865634.1;gbkey=CDS;gene=atoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AD11_RS15875;product=acetyl-CoA acetyltransferase;protein_id=WP_033865634.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 308280 309056 . - . ID=gene-AD11_RS15880;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AD11_RS15880;old_locus_tag=AD11_2561 NZ_JJLL01000134.1 Protein Homology CDS 308280 309056 . - 0 ID=cds-WP_001225852.1;Parent=gene-AD11_RS15880;Dbxref=GenBank:WP_001225852.1;Name=WP_001225852.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416729.1;locus_tag=AD11_RS15880;product=YfaP family protein;protein_id=WP_001225852.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 309061 310710 . - . ID=gene-AD11_RS15885;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=AD11_RS15885;old_locus_tag=AD11_2562 NZ_JJLL01000134.1 Protein Homology CDS 309061 310710 . - 0 ID=cds-WP_001104549.1;Parent=gene-AD11_RS15885;Dbxref=GenBank:WP_001104549.1;Name=WP_001104549.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AD11_RS15885;product=YfaQ family protein;protein_id=WP_001104549.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 310711 315225 . - . ID=gene-AD11_RS15890;Name=AD11_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15890;old_locus_tag=AD11_2563 NZ_JJLL01000134.1 Protein Homology CDS 310711 315225 . - 0 ID=cds-WP_033865635.1;Parent=gene-AD11_RS15890;Dbxref=GenBank:WP_033865635.1;Name=WP_033865635.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=AD11_RS15890;product=alpha-2-macroglobulin family protein;protein_id=WP_033865635.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 315249 315872 . - . ID=gene-AD11_RS15895;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=protein_coding;locus_tag=AD11_RS15895;old_locus_tag=AD11_2564 NZ_JJLL01000134.1 Protein Homology CDS 315249 315872 . - 0 ID=cds-WP_033865636.1;Parent=gene-AD11_RS15895;Dbxref=GenBank:WP_033865636.1;Name=WP_033865636.1;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AD11_RS15895;product=DUF1175 domain-containing protein;protein_id=WP_033865636.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 315869 317557 . - . ID=gene-AD11_RS15900;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AD11_RS15900;old_locus_tag=AD11_2565 NZ_JJLL01000134.1 Protein Homology CDS 315869 317557 . - 0 ID=cds-WP_000012305.1;Parent=gene-AD11_RS15900;Dbxref=GenBank:WP_000012305.1;Name=WP_000012305.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AD11_RS15900;product=DUF2138 domain-containing protein;protein_id=WP_000012305.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 317706 320333 . - . ID=gene-AD11_RS15905;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AD11_RS15905;old_locus_tag=AD11_2566 NZ_JJLL01000134.1 Protein Homology CDS 317706 320333 . - 0 ID=cds-WP_001281242.1;Parent=gene-AD11_RS15905;Dbxref=GenBank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AD11_RS15905;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 320480 321202 . + . ID=gene-AD11_RS15910;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AD11_RS15910;old_locus_tag=AD11_2567 NZ_JJLL01000134.1 Protein Homology CDS 320480 321202 . + 0 ID=cds-WP_000990765.1;Parent=gene-AD11_RS15910;Dbxref=GenBank:WP_000990765.1;Name=WP_000990765.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AD11_RS15910;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990765.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 321330 325082 . - . ID=gene-AD11_RS15915;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=AD11_RS15915;old_locus_tag=AD11_2568 NZ_JJLL01000134.1 Protein Homology CDS 321330 325082 . - 0 ID=cds-WP_033866463.1;Parent=gene-AD11_RS15915;Dbxref=GenBank:WP_033866463.1;Name=WP_033866463.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AD11_RS15915;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_033866463.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 325507 325650 . - . ID=gene-AD11_RS32910;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AD11_RS32910 NZ_JJLL01000134.1 Protein Homology CDS 325507 325650 . - 0 ID=cds-WP_001753443.1;Parent=gene-AD11_RS32910;Dbxref=GenBank:WP_001753443.1;Name=WP_001753443.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AD11_RS32910;product=protein YpaB;protein_id=WP_001753443.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 325778 328063 . + . ID=gene-AD11_RS15925;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AD11_RS15925;old_locus_tag=AD11_2569 NZ_JJLL01000134.1 Protein Homology CDS 325778 328063 . + 0 ID=cds-WP_001075164.1;Parent=gene-AD11_RS15925;Dbxref=GenBank:WP_001075164.1;Name=WP_001075164.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AD11_RS15925;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001075164.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 328297 329427 . + . ID=gene-AD11_RS15930;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AD11_RS15930;old_locus_tag=AD11_2570 NZ_JJLL01000134.1 Protein Homology CDS 328297 329427 . + 0 ID=cds-WP_000332037.1;Parent=gene-AD11_RS15930;Dbxref=GenBank:WP_000332037.1;Name=WP_000332037.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AD11_RS15930;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332037.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 329427 329681 . + . ID=gene-AD11_RS15935;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AD11_RS15935;old_locus_tag=AD11_2571 NZ_JJLL01000134.1 Protein Homology CDS 329427 329681 . + 0 ID=cds-WP_000135040.1;Parent=gene-AD11_RS15935;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AD11_RS15935;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 329735 330385 . - . ID=gene-AD11_RS15940;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AD11_RS15940;old_locus_tag=AD11_2572 NZ_JJLL01000134.1 Protein Homology CDS 329735 330385 . - 0 ID=cds-WP_001405456.1;Parent=gene-AD11_RS15940;Dbxref=GenBank:WP_001405456.1;Name=WP_001405456.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AD11_RS15940;product=lipopolysaccharide kinase InaA;protein_id=WP_001405456.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 330465 330569 . - . ID=gene-AD11_RS32670;Name=AD11_RS32670;end_range=330569,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32670;partial=true;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 330465 330569 . - 0 ID=cds-AD11_RS32670;Parent=gene-AD11_RS32670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=330569,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AD11_RS32670;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 330564 330806 . + . ID=gene-AD11_RS15945;Name=AD11_RS15945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS15945;old_locus_tag=AD11_2573;partial=true;pseudo=true;start_range=.,330564 NZ_JJLL01000134.1 Protein Homology CDS 330564 330806 . + 0 ID=cds-AD11_RS15945;Parent=gene-AD11_RS15945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AD11_RS15945;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,330564;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 330848 331924 . - . ID=gene-AD11_RS15950;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AD11_RS15950;old_locus_tag=AD11_2574 NZ_JJLL01000134.1 Protein Homology CDS 330848 331924 . - 0 ID=cds-WP_000779105.1;Parent=gene-AD11_RS15950;Dbxref=GenBank:WP_000779105.1;Name=WP_000779105.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416742.1;locus_tag=AD11_RS15950;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779105.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 331929 333287 . - . ID=gene-AD11_RS15955;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AD11_RS15955;old_locus_tag=AD11_2575 NZ_JJLL01000134.1 Protein Homology CDS 331929 333287 . - 0 ID=cds-WP_000948731.1;Parent=gene-AD11_RS15955;Dbxref=GenBank:WP_000948731.1;Name=WP_000948731.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=AD11_RS15955;product=glycerol-3-phosphate transporter;protein_id=WP_000948731.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 333560 335188 . + . ID=gene-AD11_RS15960;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AD11_RS15960;old_locus_tag=AD11_2576 NZ_JJLL01000134.1 Protein Homology CDS 333560 335188 . + 0 ID=cds-WP_000857257.1;Parent=gene-AD11_RS15960;Dbxref=GenBank:WP_000857257.1;Name=WP_000857257.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AD11_RS15960;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857257.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 335178 336437 . + . ID=gene-AD11_RS15965;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AD11_RS15965;old_locus_tag=AD11_2577 NZ_JJLL01000134.1 Protein Homology CDS 335178 336437 . + 0 ID=cds-WP_001209927.1;Parent=gene-AD11_RS15965;Dbxref=GenBank:WP_001209927.1;Name=WP_001209927.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416745.1;locus_tag=AD11_RS15965;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209927.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 336434 337624 . + . ID=gene-AD11_RS15970;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AD11_RS15970;old_locus_tag=AD11_2578 NZ_JJLL01000134.1 Protein Homology CDS 336434 337624 . + 0 ID=cds-WP_001000379.1;Parent=gene-AD11_RS15970;Dbxref=GenBank:WP_001000379.1;Name=WP_001000379.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AD11_RS15970;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000379.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 337817 338716 . + . ID=gene-AD11_RS15975;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AD11_RS15975;old_locus_tag=AD11_2580 NZ_JJLL01000134.1 Protein Homology CDS 337817 338716 . + 0 ID=cds-WP_000140569.1;Parent=gene-AD11_RS15975;Dbxref=GenBank:WP_000140569.1;Name=WP_000140569.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416747.1;locus_tag=AD11_RS15975;product=ISNCY family transposase;protein_id=WP_000140569.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 338729 338914 . + . ID=gene-AD11_RS15980;Name=AD11_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS15980;old_locus_tag=AD11_2581 NZ_JJLL01000134.1 GeneMarkS-2+ CDS 338729 338914 . + 0 ID=cds-WP_000150333.1;Parent=gene-AD11_RS15980;Dbxref=GenBank:WP_000150333.1;Name=WP_000150333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS15980;product=hypothetical protein;protein_id=WP_000150333.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 338955 339758 . - . ID=gene-AD11_RS15985;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=AD11_RS15985;old_locus_tag=AD11_2582 NZ_JJLL01000134.1 Protein Homology CDS 338955 339758 . - 0 ID=cds-WP_033865639.1;Parent=gene-AD11_RS15985;Dbxref=GenBank:WP_033865639.1;Name=WP_033865639.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AD11_RS15985;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_033865639.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 339776 341065 . - . ID=gene-AD11_RS15990;Name=yfaV;gbkey=Gene;gene=yfaV;gene_biotype=protein_coding;locus_tag=AD11_RS15990;old_locus_tag=AD11_2583 NZ_JJLL01000134.1 Protein Homology CDS 339776 341065 . - 0 ID=cds-WP_001295288.1;Parent=gene-AD11_RS15990;Dbxref=GenBank:WP_001295288.1;Name=WP_001295288.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfaV;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416749.4;locus_tag=AD11_RS15990;product=MFS transporter;protein_id=WP_001295288.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 341122 342327 . - . ID=gene-AD11_RS15995;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=AD11_RS15995;old_locus_tag=AD11_2584 NZ_JJLL01000134.1 Protein Homology CDS 341122 342327 . - 0 ID=cds-WP_001319848.1;Parent=gene-AD11_RS15995;Dbxref=GenBank:WP_001319848.1;Name=WP_001319848.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=AD11_RS15995;product=L-rhamnonate dehydratase;protein_id=WP_001319848.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 342342 343124 . - . ID=gene-AD11_RS16000;Name=yfaX;gbkey=Gene;gene=yfaX;gene_biotype=protein_coding;locus_tag=AD11_RS16000;old_locus_tag=AD11_2585 NZ_JJLL01000134.1 Protein Homology CDS 342342 343124 . - 0 ID=cds-WP_000894185.1;Parent=gene-AD11_RS16000;Dbxref=GenBank:WP_000894185.1;Name=WP_000894185.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfaX;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416751.1;locus_tag=AD11_RS16000;product=IclR family transcriptional regulator;protein_id=WP_000894185.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 343344 344546 . - . ID=gene-AD11_RS16005;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AD11_RS16005;old_locus_tag=AD11_2586 NZ_JJLL01000134.1 Protein Homology CDS 343344 344546 . - 0 ID=cds-WP_000921621.1;Parent=gene-AD11_RS16005;Dbxref=GenBank:WP_000921621.1;Name=WP_000921621.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AD11_RS16005;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921621.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 344646 345188 . - . ID=gene-AD11_RS16010;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=AD11_RS16010;old_locus_tag=AD11_2587 NZ_JJLL01000134.1 Protein Homology CDS 344646 345188 . - 0 ID=cds-WP_000717009.1;Parent=gene-AD11_RS16010;Dbxref=GenBank:WP_000717009.1;Name=WP_000717009.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=AD11_RS16010;product=YfaZ family outer membrane protein;protein_id=WP_000717009.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 345468 345893 . + . ID=gene-AD11_RS16015;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AD11_RS16015;old_locus_tag=AD11_2588 NZ_JJLL01000134.1 Protein Homology CDS 345468 345893 . + 0 ID=cds-WP_001249884.1;Parent=gene-AD11_RS16015;Dbxref=GenBank:WP_001249884.1;Name=WP_001249884.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311166.1;locus_tag=AD11_RS16015;product=nucleoside triphosphatase NudI;protein_id=WP_001249884.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 345932 346534 . - . ID=gene-AD11_RS16020;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AD11_RS16020;old_locus_tag=AD11_2589 NZ_JJLL01000134.1 Protein Homology CDS 345932 346534 . - 0 ID=cds-WP_000879112.1;Parent=gene-AD11_RS16020;Dbxref=GenBank:WP_000879112.1;Name=WP_000879112.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416755.1;locus_tag=AD11_RS16020;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_000879112.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 346842 347981 . + . ID=gene-AD11_RS16025;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AD11_RS16025;old_locus_tag=AD11_2590 NZ_JJLL01000134.1 Protein Homology CDS 346842 347981 . + 0 ID=cds-WP_001300684.1;Parent=gene-AD11_RS16025;Dbxref=GenBank:WP_001300684.1;Name=WP_001300684.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AD11_RS16025;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_001300684.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 347985 348953 . + . ID=gene-AD11_RS16030;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AD11_RS16030;old_locus_tag=AD11_2591 NZ_JJLL01000134.1 Protein Homology CDS 347985 348953 . + 0 ID=cds-WP_000461657.1;Parent=gene-AD11_RS16030;Dbxref=GenBank:WP_000461657.1;Name=WP_000461657.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AD11_RS16030;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 348953 350935 . + . ID=gene-AD11_RS16035;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AD11_RS16035;old_locus_tag=AD11_2592 NZ_JJLL01000134.1 Protein Homology CDS 348953 350935 . + 0 ID=cds-WP_000860273.1;Parent=gene-AD11_RS16035;Dbxref=GenBank:WP_000860273.1;Name=WP_000860273.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416758.1;locus_tag=AD11_RS16035;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_000860273.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 350932 351822 . + . ID=gene-AD11_RS16040;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AD11_RS16040;old_locus_tag=AD11_2593 NZ_JJLL01000134.1 Protein Homology CDS 350932 351822 . + 0 ID=cds-WP_000169728.1;Parent=gene-AD11_RS16040;Dbxref=GenBank:WP_000169728.1;Name=WP_000169728.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AD11_RS16040;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169728.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 351822 353474 . + . ID=gene-AD11_RS16045;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AD11_RS16045;old_locus_tag=AD11_2594 NZ_JJLL01000134.1 Protein Homology CDS 351822 353474 . + 0 ID=cds-WP_001400700.1;Parent=gene-AD11_RS16045;Dbxref=GenBank:WP_001400700.1;Name=WP_001400700.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AD11_RS16045;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_001400700.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 353471 353806 . + . ID=gene-AD11_RS16050;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AD11_RS16050;old_locus_tag=AD11_2595 NZ_JJLL01000134.1 Protein Homology CDS 353471 353806 . + 0 ID=cds-WP_000638031.1;Parent=gene-AD11_RS16050;Dbxref=GenBank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AD11_RS16050;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 353806 354192 . + . ID=gene-AD11_RS16055;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AD11_RS16055;old_locus_tag=AD11_2596 NZ_JJLL01000134.1 Protein Homology CDS 353806 354192 . + 0 ID=cds-WP_000523880.1;Parent=gene-AD11_RS16055;Dbxref=GenBank:WP_000523880.1;Name=WP_000523880.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AD11_RS16055;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523880.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 354186 354452 . - . ID=gene-AD11_RS16060;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AD11_RS16060;old_locus_tag=AD11_2597 NZ_JJLL01000134.1 Protein Homology CDS 354186 354452 . - 0 ID=cds-WP_001295285.1;Parent=gene-AD11_RS16060;Dbxref=GenBank:WP_001295285.1;Name=WP_001295285.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AD11_RS16060;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 354562 355917 . - . ID=gene-AD11_RS16065;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AD11_RS16065;old_locus_tag=AD11_2598 NZ_JJLL01000134.1 Protein Homology CDS 354562 355917 . - 0 ID=cds-WP_000577625.1;Parent=gene-AD11_RS16065;Dbxref=GenBank:WP_000577625.1;Name=WP_000577625.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AD11_RS16065;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577625.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 355914 356876 . - . ID=gene-AD11_RS16070;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AD11_RS16070;old_locus_tag=AD11_2599 NZ_JJLL01000134.1 Protein Homology CDS 355914 356876 . - 0 ID=cds-WP_001515640.1;Parent=gene-AD11_RS16070;Dbxref=GenBank:WP_001515640.1;Name=WP_001515640.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311176.1;locus_tag=AD11_RS16070;product=o-succinylbenzoate synthase;protein_id=WP_001515640.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 356876 357733 . - . ID=gene-AD11_RS16075;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AD11_RS16075;old_locus_tag=AD11_2600 NZ_JJLL01000134.1 Protein Homology CDS 356876 357733 . - 0 ID=cds-WP_000639996.1;Parent=gene-AD11_RS16075;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AD11_RS16075;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 357748 358506 . - . ID=gene-AD11_RS16080;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AD11_RS16080;old_locus_tag=AD11_2601 NZ_JJLL01000134.1 Protein Homology CDS 357748 358506 . - 0 ID=cds-WP_000600499.1;Parent=gene-AD11_RS16080;Dbxref=GenBank:WP_000600499.1;Name=WP_000600499.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=AD11_RS16080;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600499.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 358503 360173 . - . ID=gene-AD11_RS16085;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AD11_RS16085;old_locus_tag=AD11_2602 NZ_JJLL01000134.1 Protein Homology CDS 358503 360173 . - 0 ID=cds-WP_001341573.1;Parent=gene-AD11_RS16085;Dbxref=GenBank:WP_001341573.1;Name=WP_001341573.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AD11_RS16085;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001341573.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 360262 361557 . - . ID=gene-AD11_RS16090;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AD11_RS16090;old_locus_tag=AD11_2603 NZ_JJLL01000134.1 Protein Homology CDS 360262 361557 . - 0 ID=cds-WP_001564815.1;Parent=gene-AD11_RS16090;Dbxref=GenBank:WP_001564815.1;Name=WP_001564815.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311180.2;locus_tag=AD11_RS16090;product=isochorismate synthase MenF;protein_id=WP_001564815.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 361636 361941 . - . ID=gene-AD11_RS16095;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AD11_RS16095;old_locus_tag=AD11_2604 NZ_JJLL01000134.1 Protein Homology CDS 361636 361941 . - 0 ID=cds-WP_000070621.1;Parent=gene-AD11_RS16095;Dbxref=GenBank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AD11_RS16095;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 361996 362457 . - . ID=gene-AD11_RS16100;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AD11_RS16100;old_locus_tag=AD11_2605 NZ_JJLL01000134.1 Protein Homology CDS 361996 362457 . - 0 ID=cds-WP_000574088.1;Parent=gene-AD11_RS16100;Dbxref=GenBank:WP_000574088.1;Name=WP_000574088.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311182.1;locus_tag=AD11_RS16100;product=GNAT family N-acetyltransferase;protein_id=WP_000574088.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 362522 363439 . + . ID=gene-AD11_RS16105;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AD11_RS16105;old_locus_tag=AD11_2606 NZ_JJLL01000134.1 Protein Homology CDS 362522 363439 . + 0 ID=cds-WP_001329358.1;Parent=gene-AD11_RS16105;Dbxref=GenBank:WP_001329358.1;Name=WP_001329358.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311183.2;locus_tag=AD11_RS16105;product=ribonuclease BN;protein_id=WP_001329358.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 363627 364847 . + . ID=gene-AD11_RS16110;Name=elaD;gbkey=Gene;gene=elaD;gene_biotype=protein_coding;locus_tag=AD11_RS16110;old_locus_tag=AD11_2608 NZ_JJLL01000134.1 Protein Homology CDS 363627 364847 . + 0 ID=cds-WP_077747106.1;Parent=gene-AD11_RS16110;Dbxref=GenBank:WP_077747106.1;Name=WP_077747106.1;gbkey=CDS;gene=elaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AD11_RS16110;product=deubiquitinase ElaD;protein_id=WP_077747106.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 365258 365876 . + . ID=gene-AD11_RS30870;Name=AD11_RS30870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30870;old_locus_tag=AD11_2609;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 365258 365876 . + 0 ID=cds-AD11_RS30870;Parent=gene-AD11_RS30870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353070.1;locus_tag=AD11_RS30870;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 365979 366482 . + . ID=gene-AD11_RS16120;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AD11_RS16120;old_locus_tag=AD11_2610 NZ_JJLL01000134.1 Protein Homology CDS 365979 366482 . + 0 ID=cds-WP_001752851.1;Parent=gene-AD11_RS16120;Dbxref=GenBank:WP_001752851.1;Name=WP_001752851.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311186.1;locus_tag=AD11_RS16120;product=YfbM family protein;protein_id=WP_001752851.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 366549 368006 . - . ID=gene-AD11_RS16125;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AD11_RS16125;old_locus_tag=AD11_2611 NZ_JJLL01000134.1 Protein Homology CDS 366549 368006 . - 0 ID=cds-WP_000156701.1;Parent=gene-AD11_RS16125;Dbxref=GenBank:WP_000156701.1;Name=WP_000156701.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AD11_RS16125;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156701.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 368013 369542 . - . ID=gene-AD11_RS16130;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AD11_RS16130;old_locus_tag=AD11_2612 NZ_JJLL01000134.1 Protein Homology CDS 368013 369542 . - 0 ID=cds-WP_000926441.1;Parent=gene-AD11_RS16130;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AD11_RS16130;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 369706 371547 . - . ID=gene-AD11_RS16135;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AD11_RS16135;old_locus_tag=AD11_2613 NZ_JJLL01000134.1 Protein Homology CDS 369706 371547 . - 0 ID=cds-WP_001056618.1;Parent=gene-AD11_RS16135;Dbxref=GenBank:WP_001056618.1;Name=WP_001056618.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AD11_RS16135;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056618.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 371544 371846 . - . ID=gene-AD11_RS16140;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AD11_RS16140;old_locus_tag=AD11_2614 NZ_JJLL01000134.1 Protein Homology CDS 371544 371846 . - 0 ID=cds-WP_000612644.1;Parent=gene-AD11_RS16140;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AD11_RS16140;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 371843 372397 . - . ID=gene-AD11_RS16145;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AD11_RS16145;old_locus_tag=AD11_2615 NZ_JJLL01000134.1 Protein Homology CDS 371843 372397 . - 0 ID=cds-WP_033865641.1;Parent=gene-AD11_RS16145;Dbxref=GenBank:WP_033865641.1;Name=WP_033865641.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311191.1;locus_tag=AD11_RS16145;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_033865641.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 372409 372951 . - . ID=gene-AD11_RS16150;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AD11_RS16150;old_locus_tag=AD11_2616 NZ_JJLL01000134.1 Protein Homology CDS 372409 372951 . - 0 ID=cds-WP_000172749.1;Parent=gene-AD11_RS16150;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AD11_RS16150;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 372966 373943 . - . ID=gene-AD11_RS16155;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AD11_RS16155;old_locus_tag=AD11_2617 NZ_JJLL01000134.1 Protein Homology CDS 372966 373943 . - 0 ID=cds-WP_000118507.1;Parent=gene-AD11_RS16155;Dbxref=GenBank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AD11_RS16155;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 373940 376666 . - . ID=gene-AD11_RS16160;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AD11_RS16160;old_locus_tag=AD11_2618 NZ_JJLL01000134.1 Protein Homology CDS 373940 376666 . - 0 ID=cds-WP_000190939.1;Parent=gene-AD11_RS16160;Dbxref=GenBank:WP_000190939.1;Name=WP_000190939.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416786.4;locus_tag=AD11_RS16160;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_000190939.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 376719 378056 . - . ID=gene-AD11_RS16165;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AD11_RS16165;old_locus_tag=AD11_2619 NZ_JJLL01000134.1 Protein Homology CDS 376719 378056 . - 0 ID=cds-WP_000789502.1;Parent=gene-AD11_RS16165;Dbxref=GenBank:WP_000789502.1;Name=WP_000789502.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=AD11_RS16165;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789502.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 378053 378553 . - . ID=gene-AD11_RS16170;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AD11_RS16170;old_locus_tag=AD11_2620 NZ_JJLL01000134.1 Protein Homology CDS 378053 378553 . - 0 ID=cds-WP_000545042.1;Parent=gene-AD11_RS16170;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AD11_RS16170;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 378556 380358 . - . ID=gene-AD11_RS16175;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AD11_RS16175;old_locus_tag=AD11_2621 NZ_JJLL01000134.1 Protein Homology CDS 378556 380358 . - 0 ID=cds-WP_000247878.1;Parent=gene-AD11_RS16175;Dbxref=GenBank:WP_000247878.1;Name=WP_000247878.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AD11_RS16175;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247878.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 380452 381114 . - . ID=gene-AD11_RS16180;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AD11_RS16180;old_locus_tag=AD11_2622 NZ_JJLL01000134.1 Protein Homology CDS 380452 381114 . - 0 ID=cds-WP_000386733.1;Parent=gene-AD11_RS16180;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AD11_RS16180;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 381130 381573 . - . ID=gene-AD11_RS16185;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AD11_RS16185;old_locus_tag=AD11_2623 NZ_JJLL01000134.1 Protein Homology CDS 381130 381573 . - 0 ID=cds-WP_000062997.1;Parent=gene-AD11_RS16185;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AD11_RS16185;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 382204 383142 . - . ID=gene-AD11_RS16190;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AD11_RS16190;old_locus_tag=AD11_2624 NZ_JJLL01000134.1 Protein Homology CDS 382204 383142 . - 0 ID=cds-WP_000622290.1;Parent=gene-AD11_RS16190;Dbxref=GenBank:WP_000622290.1;Name=WP_000622290.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=AD11_RS16190;product=transcriptional regulator LrhA;protein_id=WP_000622290.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 384062 385279 . + . ID=gene-AD11_RS16195;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AD11_RS16195;old_locus_tag=AD11_2625 NZ_JJLL01000134.1 Protein Homology CDS 384062 385279 . + 0 ID=cds-WP_000074527.1;Parent=gene-AD11_RS16195;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AD11_RS16195;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 385363 385962 . + . ID=gene-AD11_RS16200;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AD11_RS16200;old_locus_tag=AD11_2626 NZ_JJLL01000134.1 Protein Homology CDS 385363 385962 . + 0 ID=cds-WP_000813859.1;Parent=gene-AD11_RS16200;Dbxref=GenBank:WP_000813859.1;Name=WP_000813859.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416794.1;locus_tag=AD11_RS16200;product=5'-deoxynucleotidase;protein_id=WP_000813859.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 386021 387853 . - . ID=gene-AD11_RS16205;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AD11_RS16205;old_locus_tag=AD11_2627 NZ_JJLL01000134.1 Protein Homology CDS 386021 387853 . - 0 ID=cds-WP_001012899.1;Parent=gene-AD11_RS16205;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AD11_RS16205;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 387940 388590 . - . ID=gene-AD11_RS16210;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AD11_RS16210;old_locus_tag=AD11_2628 NZ_JJLL01000134.1 Protein Homology CDS 387940 388590 . - 0 ID=cds-WP_001203392.1;Parent=gene-AD11_RS16210;Dbxref=GenBank:WP_001203392.1;Name=WP_001203392.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416796.2;locus_tag=AD11_RS16210;product=hexitol phosphatase HxpA;protein_id=WP_001203392.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 388601 389095 . - . ID=gene-AD11_RS16215;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AD11_RS16215;old_locus_tag=AD11_2629 NZ_JJLL01000134.1 Protein Homology CDS 388601 389095 . - 0 ID=cds-WP_000426124.1;Parent=gene-AD11_RS16215;Dbxref=GenBank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AD11_RS16215;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 389178 389633 . - . ID=gene-AD11_RS16220;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AD11_RS16220;old_locus_tag=AD11_2630 NZ_JJLL01000134.1 Protein Homology CDS 389178 389633 . - 0 ID=cds-WP_000106627.1;Parent=gene-AD11_RS16220;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AD11_RS16220;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 389971 391173 . + . ID=gene-AD11_RS16230;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AD11_RS16230;old_locus_tag=AD11_2632 NZ_JJLL01000134.1 Protein Homology CDS 389971 391173 . + 0 ID=cds-WP_000095707.1;Parent=gene-AD11_RS16230;Dbxref=GenBank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AD11_RS16230;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 391248 393392 . + . ID=gene-AD11_RS16235;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AD11_RS16235;old_locus_tag=AD11_2633 NZ_JJLL01000134.1 Protein Homology CDS 391248 393392 . + 0 ID=cds-WP_000086722.1;Parent=gene-AD11_RS16235;Dbxref=GenBank:WP_000086722.1;Name=WP_000086722.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AD11_RS16235;product=phosphate acetyltransferase;protein_id=WP_000086722.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 393582 395102 . + . ID=gene-AD11_RS16240;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AD11_RS16240;old_locus_tag=AD11_2634 NZ_JJLL01000134.1 Protein Homology CDS 393582 395102 . + 0 ID=cds-WP_001274493.1;Parent=gene-AD11_RS16240;Dbxref=GenBank:WP_001274493.1;Name=WP_001274493.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AD11_RS16240;product=putative basic amino acid antiporter YfcC;protein_id=WP_001274493.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 395135 395677 . - . ID=gene-AD11_RS16245;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AD11_RS16245;old_locus_tag=AD11_2635 NZ_JJLL01000134.1 Protein Homology CDS 395135 395677 . - 0 ID=cds-WP_000437935.1;Parent=gene-AD11_RS16245;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AD11_RS16245;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 395735 396286 . - . ID=gene-AD11_RS16250;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AD11_RS16250;old_locus_tag=AD11_2636 NZ_JJLL01000134.1 Protein Homology CDS 395735 396286 . - 0 ID=cds-WP_000772452.1;Parent=gene-AD11_RS16250;Dbxref=GenBank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AD11_RS16250;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 396342 396986 . - . ID=gene-AD11_RS16255;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AD11_RS16255;old_locus_tag=AD11_2637 NZ_JJLL01000134.1 Protein Homology CDS 396342 396986 . - 0 ID=cds-WP_000042442.1;Parent=gene-AD11_RS16255;Dbxref=GenBank:WP_000042442.1;Name=WP_000042442.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416804.1;locus_tag=AD11_RS16255;product=glutathione transferase;protein_id=WP_000042442.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 397122 397769 . + . ID=gene-AD11_RS16260;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AD11_RS16260;old_locus_tag=AD11_2638 NZ_JJLL01000134.1 Protein Homology CDS 397122 397769 . + 0 ID=cds-WP_000566471.1;Parent=gene-AD11_RS16260;Dbxref=GenBank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AD11_RS16260;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566471.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 397826 398188 . + . ID=gene-AD11_RS16265;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AD11_RS16265;old_locus_tag=AD11_2639 NZ_JJLL01000134.1 Protein Homology CDS 397826 398188 . + 0 ID=cds-WP_001394545.1;Parent=gene-AD11_RS16265;Dbxref=GenBank:WP_001394545.1;Name=WP_001394545.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AD11_RS16265;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_001394545.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 398209 399102 . + . ID=gene-AD11_RS16270;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AD11_RS16270;old_locus_tag=AD11_2640 NZ_JJLL01000134.1 Protein Homology CDS 398209 399102 . + 0 ID=cds-WP_001028341.1;Parent=gene-AD11_RS16270;Dbxref=GenBank:WP_001028341.1;Name=WP_001028341.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AD11_RS16270;product=TIGR01777 family oxidoreductase;protein_id=WP_001028341.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 399150 400040 . - . ID=gene-AD11_RS16275;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=AD11_RS16275;old_locus_tag=AD11_2641 NZ_JJLL01000134.1 Protein Homology CDS 399150 400040 . - 0 ID=cds-WP_000156149.1;Parent=gene-AD11_RS16275;Dbxref=GenBank:WP_000156149.1;Name=WP_000156149.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AD11_RS16275;product=recombination-promoting nuclease RpnB;protein_id=WP_000156149.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 400237 401010 . - . ID=gene-AD11_RS16280;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AD11_RS16280;old_locus_tag=AD11_2642 NZ_JJLL01000134.1 Protein Homology CDS 400237 401010 . - 0 ID=cds-WP_001293613.1;Parent=gene-AD11_RS16280;Dbxref=GenBank:WP_001293613.1;Name=WP_001293613.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416809.1;locus_tag=AD11_RS16280;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293613.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 401018 401734 . - . ID=gene-AD11_RS16285;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AD11_RS16285;old_locus_tag=AD11_2643 NZ_JJLL01000134.1 Protein Homology CDS 401018 401734 . - 0 ID=cds-WP_000569958.1;Parent=gene-AD11_RS16285;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AD11_RS16285;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 401731 402417 . - . ID=gene-AD11_RS16290;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AD11_RS16290;old_locus_tag=AD11_2644 NZ_JJLL01000134.1 Protein Homology CDS 401731 402417 . - 0 ID=cds-WP_000965522.1;Parent=gene-AD11_RS16290;Dbxref=GenBank:WP_000965522.1;Name=WP_000965522.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AD11_RS16290;product=histidine ABC transporter permease HisQ;protein_id=WP_000965522.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 402507 403289 . - . ID=gene-AD11_RS16295;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AD11_RS16295;old_locus_tag=AD11_2645 NZ_JJLL01000134.1 Protein Homology CDS 402507 403289 . - 0 ID=cds-WP_000737621.1;Parent=gene-AD11_RS16295;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AD11_RS16295;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 403510 404292 . - . ID=gene-AD11_RS16300;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AD11_RS16300;old_locus_tag=AD11_2646 NZ_JJLL01000134.1 Protein Homology CDS 403510 404292 . - 0 ID=cds-WP_000748271.1;Parent=gene-AD11_RS16300;Dbxref=GenBank:WP_000748271.1;Name=WP_000748271.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416813.1;locus_tag=AD11_RS16300;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748271.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 404558 405127 . - . ID=gene-AD11_RS16305;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AD11_RS16305;old_locus_tag=AD11_2647 NZ_JJLL01000134.1 Protein Homology CDS 404558 405127 . - 0 ID=cds-WP_033865642.1;Parent=gene-AD11_RS16305;Dbxref=GenBank:WP_033865642.1;Name=WP_033865642.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AD11_RS16305;product=flavin prenyltransferase UbiX;protein_id=WP_033865642.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 405222 406739 . - . ID=gene-AD11_RS16310;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AD11_RS16310;old_locus_tag=AD11_2648 NZ_JJLL01000134.1 Protein Homology CDS 405222 406739 . - 0 ID=cds-WP_033865643.1;Parent=gene-AD11_RS16310;Dbxref=GenBank:WP_033865643.1;Name=WP_033865643.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AD11_RS16310;product=amidophosphoribosyltransferase;protein_id=WP_033865643.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 406776 407264 . - . ID=gene-AD11_RS16315;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AD11_RS16315;old_locus_tag=AD11_2649 NZ_JJLL01000134.1 Protein Homology CDS 406776 407264 . - 0 ID=cds-WP_000262113.1;Parent=gene-AD11_RS16315;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AD11_RS16315;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 407523 408185 . - . ID=gene-AD11_RS16320;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AD11_RS16320;old_locus_tag=AD11_2650 NZ_JJLL01000134.1 Protein Homology CDS 407523 408185 . - 0 ID=cds-WP_000146992.1;Parent=gene-AD11_RS16320;Dbxref=GenBank:WP_000146992.1;Name=WP_000146992.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AD11_RS16320;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 408175 409443 . - . ID=gene-AD11_RS16325;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AD11_RS16325;old_locus_tag=AD11_2651 NZ_JJLL01000134.1 Protein Homology CDS 408175 409443 . - 0 ID=cds-WP_000584546.1;Parent=gene-AD11_RS16325;Dbxref=GenBank:WP_000584546.1;Name=WP_000584546.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AD11_RS16325;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584546.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 409513 410427 . - . ID=gene-AD11_RS16330;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AD11_RS16330;old_locus_tag=AD11_2652 NZ_JJLL01000134.1 Protein Homology CDS 409513 410427 . - 0 ID=cds-WP_000118404.1;Parent=gene-AD11_RS16330;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AD11_RS16330;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 410583 411242 . - . ID=gene-AD11_RS16335;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AD11_RS16335;old_locus_tag=AD11_2653 NZ_JJLL01000134.1 Protein Homology CDS 410583 411242 . - 0 ID=cds-WP_000364335.1;Parent=gene-AD11_RS16335;Dbxref=GenBank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AD11_RS16335;product=DedA family protein;protein_id=WP_000364335.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 411325 412137 . - . ID=gene-AD11_RS16340;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AD11_RS16340;old_locus_tag=AD11_2654 NZ_JJLL01000134.1 Protein Homology CDS 411325 412137 . - 0 ID=cds-WP_001283585.1;Parent=gene-AD11_RS16340;Dbxref=GenBank:WP_001283585.1;Name=WP_001283585.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AD11_RS16340;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283585.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 412137 413150 . - . ID=gene-AD11_RS16345;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AD11_RS16345;old_locus_tag=AD11_2655 NZ_JJLL01000134.1 Protein Homology CDS 412137 413150 . - 0 ID=cds-WP_033865644.1;Parent=gene-AD11_RS16345;Dbxref=GenBank:WP_033865644.1;Name=WP_033865644.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AD11_RS16345;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_033865644.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 413216 414352 . - . ID=gene-AD11_RS16350;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AD11_RS16350;old_locus_tag=AD11_2657 NZ_JJLL01000134.1 Protein Homology CDS 413216 414352 . - 0 ID=cds-WP_000699145.1;Parent=gene-AD11_RS16350;Dbxref=GenBank:WP_000699145.1;Name=WP_000699145.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416823.1;locus_tag=AD11_RS16350;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699145.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 414451 415446 . + . ID=gene-AD11_RS16355;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AD11_RS16355;old_locus_tag=AD11_2658 NZ_JJLL01000134.1 Protein Homology CDS 414451 415446 . + 0 ID=cds-WP_000615834.1;Parent=gene-AD11_RS16355;Dbxref=GenBank:WP_000615834.1;Name=WP_000615834.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416824.1;locus_tag=AD11_RS16355;product=flagella biosynthesis regulator Flk;protein_id=WP_000615834.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 415443 416621 . - . ID=gene-AD11_RS16360;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AD11_RS16360;old_locus_tag=AD11_2659 NZ_JJLL01000134.1 Protein Homology CDS 415443 416621 . - 0 ID=cds-WP_000127751.1;Parent=gene-AD11_RS16360;Dbxref=GenBank:WP_000127751.1;Name=WP_000127751.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfcJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311233.1;locus_tag=AD11_RS16360;product=arabinose transporter;protein_id=WP_000127751.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 416886 418106 . - . ID=gene-AD11_RS16365;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AD11_RS16365;old_locus_tag=AD11_2660 NZ_JJLL01000134.1 Protein Homology CDS 416886 418106 . - 0 ID=cds-WP_000817178.1;Parent=gene-AD11_RS16365;Dbxref=GenBank:WP_000817178.1;Name=WP_000817178.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=AD11_RS16365;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 418265 420271 . + . ID=gene-AD11_RS16370;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AD11_RS16370;old_locus_tag=AD11_2661 NZ_JJLL01000134.1 Protein Homology CDS 418265 420271 . + 0 ID=cds-WP_000683789.1;Parent=gene-AD11_RS16370;Dbxref=GenBank:WP_000683789.1;Name=WP_000683789.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AD11_RS16370;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_000683789.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 420392 420670 . - . ID=gene-AD11_RS16375;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AD11_RS16375;old_locus_tag=AD11_2662 NZ_JJLL01000134.1 Protein Homology CDS 420392 420670 . - 0 ID=cds-WP_000559764.1;Parent=gene-AD11_RS16375;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AD11_RS16375;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 420704 421252 . - . ID=gene-AD11_RS16380;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AD11_RS16380;old_locus_tag=AD11_2663 NZ_JJLL01000134.1 Protein Homology CDS 420704 421252 . - 0 ID=cds-WP_001089222.1;Parent=gene-AD11_RS16380;Dbxref=GenBank:WP_001089222.1;Name=WP_001089222.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AD11_RS16380;product=elongation factor P hydroxylase;protein_id=WP_001089222.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 421252 422061 . - . ID=gene-AD11_RS16385;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AD11_RS16385;old_locus_tag=AD11_2664 NZ_JJLL01000134.1 Protein Homology CDS 421252 422061 . - 0 ID=cds-WP_000447361.1;Parent=gene-AD11_RS16385;Dbxref=GenBank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AD11_RS16385;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447361.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 422061 422885 . - . ID=gene-AD11_RS16390;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AD11_RS16390;old_locus_tag=AD11_2665 NZ_JJLL01000134.1 Protein Homology CDS 422061 422885 . - 0 ID=cds-WP_001043825.1;Parent=gene-AD11_RS16390;Dbxref=GenBank:WP_001043825.1;Name=WP_001043825.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AD11_RS16390;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043825.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 422889 423974 . - . ID=gene-AD11_RS16395;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AD11_RS16395;old_locus_tag=AD11_2666 NZ_JJLL01000134.1 Protein Homology CDS 422889 423974 . - 0 ID=cds-WP_001333535.1;Parent=gene-AD11_RS16395;Dbxref=GenBank:WP_001333535.1;Name=WP_001333535.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AD11_RS16395;product=chorismate synthase;protein_id=WP_001333535.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 424009 424941 . - . ID=gene-AD11_RS16400;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AD11_RS16400;old_locus_tag=AD11_2667 NZ_JJLL01000134.1 Protein Homology CDS 424009 424941 . - 0 ID=cds-WP_001300582.1;Parent=gene-AD11_RS16400;Dbxref=GenBank:WP_001300582.1;Name=WP_001300582.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AD11_RS16400;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001300582.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 425107 425658 . + . ID=gene-AD11_RS16405;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AD11_RS16405;old_locus_tag=AD11_2668 NZ_JJLL01000134.1 Protein Homology CDS 425107 425658 . + 0 ID=cds-WP_000730806.1;Parent=gene-AD11_RS16405;Dbxref=GenBank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AD11_RS16405;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 425729 426550 . - . ID=gene-AD11_RS16410;Name=yfcO;gbkey=Gene;gene=yfcO;gene_biotype=protein_coding;locus_tag=AD11_RS16410;old_locus_tag=AD11_2669 NZ_JJLL01000134.1 Protein Homology CDS 425729 426550 . - 0 ID=cds-WP_000698745.1;Parent=gene-AD11_RS16410;Dbxref=GenBank:WP_000698745.1;Name=WP_000698745.1;gbkey=CDS;gene=yfcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416835.2;locus_tag=AD11_RS16410;product=fimbrial adhesin YfcO;protein_id=WP_000698745.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 426552 427091 . - . ID=gene-AD11_RS16415;Name=yfcP;gbkey=Gene;gene=yfcP;gene_biotype=protein_coding;locus_tag=AD11_RS16415;old_locus_tag=AD11_2670 NZ_JJLL01000134.1 Protein Homology CDS 426552 427091 . - 0 ID=cds-WP_001043398.1;Parent=gene-AD11_RS16415;Dbxref=GenBank:WP_001043398.1;Name=WP_001043398.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcP;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416836.1;locus_tag=AD11_RS16415;product=fimbrial protein;protein_id=WP_001043398.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 427088 427576 . - . ID=gene-AD11_RS16420;Name=yfcQ;gbkey=Gene;gene=yfcQ;gene_biotype=protein_coding;locus_tag=AD11_RS16420;old_locus_tag=AD11_2671 NZ_JJLL01000134.1 Protein Homology CDS 427088 427576 . - 0 ID=cds-WP_001232541.1;Parent=gene-AD11_RS16420;Dbxref=GenBank:WP_001232541.1;Name=WP_001232541.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcQ;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416837.1;locus_tag=AD11_RS16420;product=fimbrial protein;protein_id=WP_001232541.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 427573 428085 . - . ID=gene-AD11_RS16425;Name=yfcR;gbkey=Gene;gene=yfcR;gene_biotype=protein_coding;locus_tag=AD11_RS16425;old_locus_tag=AD11_2672 NZ_JJLL01000134.1 Protein Homology CDS 427573 428085 . - 0 ID=cds-WP_001311011.1;Parent=gene-AD11_RS16425;Dbxref=GenBank:WP_001311011.1;Name=WP_001311011.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416838.1;locus_tag=AD11_RS16425;product=fimbrial protein;protein_id=WP_001311011.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 428085 428837 . - . ID=gene-AD11_RS16430;Name=yfcS;gbkey=Gene;gene=yfcS;gene_biotype=protein_coding;locus_tag=AD11_RS16430;old_locus_tag=AD11_2673 NZ_JJLL01000134.1 Protein Homology CDS 428085 428837 . - 0 ID=cds-WP_001281606.1;Parent=gene-AD11_RS16430;Dbxref=GenBank:WP_001281606.1;Name=WP_001281606.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yfcS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416839.1;locus_tag=AD11_RS16430;product=fimbria/pilus periplasmic chaperone;protein_id=WP_001281606.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 428857 431502 . - . ID=gene-AD11_RS16435;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=AD11_RS16435;old_locus_tag=AD11_2674 NZ_JJLL01000134.1 Protein Homology CDS 428857 431502 . - 0 ID=cds-WP_033865645.1;Parent=gene-AD11_RS16435;Dbxref=GenBank:WP_033865645.1;Name=WP_033865645.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AD11_RS16435;product=fimbrial usher protein YfcU;protein_id=WP_033865645.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 431584 432147 . - . ID=gene-AD11_RS16440;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AD11_RS16440;old_locus_tag=AD11_2675 NZ_JJLL01000134.1 Protein Homology CDS 431584 432147 . - 0 ID=cds-WP_000033316.1;Parent=gene-AD11_RS16440;Dbxref=GenBank:WP_000033316.1;Name=WP_000033316.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416841.1;locus_tag=AD11_RS16440;product=fimbrial protein;protein_id=WP_000033316.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 432828 433313 . - . ID=gene-AD11_RS16445;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AD11_RS16445;old_locus_tag=AD11_2677 NZ_JJLL01000134.1 Protein Homology CDS 432828 433313 . - 0 ID=cds-WP_001195819.1;Parent=gene-AD11_RS16445;Dbxref=GenBank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AD11_RS16445;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 433516 435660 . - . ID=gene-AD11_RS16450;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AD11_RS16450;old_locus_tag=AD11_2678 NZ_JJLL01000134.1 Protein Homology CDS 433516 435660 . - 0 ID=cds-WP_032083549.1;Parent=gene-AD11_RS16450;Dbxref=GenBank:WP_032083549.1;Name=WP_032083549.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708223.1;locus_tag=AD11_RS16450;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_032083549.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 435660 436970 . - . ID=gene-AD11_RS16455;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AD11_RS16455;old_locus_tag=AD11_2679 NZ_JJLL01000134.1 Protein Homology CDS 435660 436970 . - 0 ID=cds-WP_001530662.1;Parent=gene-AD11_RS16455;Dbxref=GenBank:WP_001530662.1;Name=WP_001530662.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AD11_RS16455;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001530662.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 437151 437435 . - . ID=gene-AD11_RS16460;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AD11_RS16460;old_locus_tag=AD11_2680 NZ_JJLL01000134.1 Protein Homology CDS 437151 437435 . - 0 ID=cds-WP_001296261.1;Parent=gene-AD11_RS16460;Dbxref=GenBank:WP_001296261.1;Name=WP_001296261.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AD11_RS16460;product=YfcZ/YiiS family protein;protein_id=WP_001296261.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 437807 439147 . + . ID=gene-AD11_RS16465;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AD11_RS16465;old_locus_tag=AD11_2681 NZ_JJLL01000134.1 Protein Homology CDS 437807 439147 . + 0 ID=cds-WP_001400735.1;Parent=gene-AD11_RS16465;Dbxref=GenBank:WP_001400735.1;Name=WP_001400735.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=AD11_RS16465;product=long-chain fatty acid transporter FadL;protein_id=WP_001400735.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 439513 440571 . + . ID=gene-AD11_RS16470;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;locus_tag=AD11_RS16470;old_locus_tag=AD11_2682 NZ_JJLL01000134.1 Protein Homology CDS 439513 440571 . + 0 ID=cds-WP_000937786.1;Parent=gene-AD11_RS16470;Dbxref=GenBank:WP_000937786.1;Name=WP_000937786.1;gbkey=CDS;gene=yfdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AD11_RS16470;product=protein YfdF;protein_id=WP_000937786.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 440753 441508 . - . ID=gene-AD11_RS16475;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AD11_RS16475;old_locus_tag=AD11_2683 NZ_JJLL01000134.1 Protein Homology CDS 440753 441508 . - 0 ID=cds-WP_000776768.1;Parent=gene-AD11_RS16475;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AD11_RS16475;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 441802 442734 . + . ID=gene-AD11_RS16480;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AD11_RS16480;old_locus_tag=AD11_2685 NZ_JJLL01000134.1 Protein Homology CDS 441802 442734 . + 0 ID=cds-WP_000368140.1;Parent=gene-AD11_RS16480;Dbxref=GenBank:WP_000368140.1;Name=WP_000368140.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416849.1;locus_tag=AD11_RS16480;product=formate/nitrite transporter family protein;protein_id=WP_000368140.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 442810 442884 . + . ID=gene-AD11_RS16485;Name=AD11_RS16485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16485;old_locus_tag=AD11_2686 NZ_JJLL01000134.1 tRNAscan-SE tRNA 442810 442884 . + . ID=rna-AD11_RS16485;Parent=gene-AD11_RS16485;anticodon=(pos:442843..442845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16485;product=tRNA-Arg NZ_JJLL01000134.1 tRNAscan-SE exon 442810 442884 . + . ID=exon-AD11_RS16485-1;Parent=rna-AD11_RS16485;anticodon=(pos:442843..442845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16485;product=tRNA-Arg NZ_JJLL01000134.1 RefSeq gene 442980 443915 . - . ID=gene-AD11_RS16490;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=AD11_RS16490;old_locus_tag=AD11_2687 NZ_JJLL01000134.1 Protein Homology CDS 442980 443915 . - 0 ID=cds-WP_001300996.1;Parent=gene-AD11_RS16490;Dbxref=GenBank:WP_001300996.1;Name=WP_001300996.1;Ontology_term=GO:0006355,GO:0009063,GO:0003677,GO:0003700,GO:0005737;gbkey=CDS;gene=dsdC;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416865.1;locus_tag=AD11_RS16490;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_001300996.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 444133 445470 . + . ID=gene-AD11_RS16495;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=AD11_RS16495;old_locus_tag=AD11_2688 NZ_JJLL01000134.1 Protein Homology CDS 444133 445470 . + 0 ID=cds-WP_000556048.1;Parent=gene-AD11_RS16495;Dbxref=GenBank:WP_000556048.1;Name=WP_000556048.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AD11_RS16495;product=D-serine transporter DsdX;protein_id=WP_000556048.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 445488 446816 . + . ID=gene-AD11_RS16500;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AD11_RS16500;old_locus_tag=AD11_2689 NZ_JJLL01000134.1 Protein Homology CDS 445488 446816 . + 0 ID=cds-WP_000426426.1;Parent=gene-AD11_RS16500;Dbxref=GenBank:WP_000426426.1;Name=WP_000426426.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AD11_RS16500;product=D-serine ammonia-lyase;protein_id=WP_000426426.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 446924 448462 . - . ID=gene-AD11_RS16505;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AD11_RS16505;old_locus_tag=AD11_2690 NZ_JJLL01000134.1 Protein Homology CDS 446924 448462 . - 0 ID=cds-WP_001018731.1;Parent=gene-AD11_RS16505;Dbxref=GenBank:WP_001018731.1;Name=WP_001018731.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AD11_RS16505;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018731.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 448462 449625 . - . ID=gene-AD11_RS16510;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AD11_RS16510;old_locus_tag=AD11_2691 NZ_JJLL01000134.1 Protein Homology CDS 448462 449625 . - 0 ID=cds-WP_000435167.1;Parent=gene-AD11_RS16510;Dbxref=GenBank:WP_000435167.1;Name=WP_000435167.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416869.1;locus_tag=AD11_RS16510;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_000435167.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 450041 450655 . + . ID=gene-AD11_RS16515;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AD11_RS16515;old_locus_tag=AD11_2692 NZ_JJLL01000134.1 Protein Homology CDS 450041 450655 . + 0 ID=cds-WP_000991370.1;Parent=gene-AD11_RS16515;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AD11_RS16515;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 450660 454253 . + . ID=gene-AD11_RS16520;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AD11_RS16520;old_locus_tag=AD11_2693 NZ_JJLL01000134.1 Protein Homology CDS 450660 454253 . + 0 ID=cds-WP_001355656.1;Parent=gene-AD11_RS16520;Dbxref=GenBank:WP_001355656.1;Name=WP_001355656.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416871.1;locus_tag=AD11_RS16520;product=acid-sensing system histidine kinase EvgS;protein_id=WP_001355656.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 454309 455454 . - . ID=gene-AD11_RS16525;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AD11_RS16525;old_locus_tag=AD11_2694 NZ_JJLL01000134.1 Protein Homology CDS 454309 455454 . - 0 ID=cds-WP_001296867.1;Parent=gene-AD11_RS16525;Dbxref=GenBank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AD11_RS16525;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 455528 456472 . - . ID=gene-AD11_RS16530;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AD11_RS16530;old_locus_tag=AD11_2695 NZ_JJLL01000134.1 Protein Homology CDS 455528 456472 . - 0 ID=cds-WP_000955025.1;Parent=gene-AD11_RS16530;Dbxref=GenBank:WP_000955025.1;Name=WP_000955025.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AD11_RS16530;product=transporter YfdV;protein_id=WP_000955025.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 456542 458236 . - . ID=gene-AD11_RS16535;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AD11_RS16535;old_locus_tag=AD11_2696 NZ_JJLL01000134.1 Protein Homology CDS 456542 458236 . - 0 ID=cds-WP_001283499.1;Parent=gene-AD11_RS16535;Dbxref=GenBank:WP_001283499.1;Name=WP_001283499.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AD11_RS16535;product=oxalyl-CoA decarboxylase;protein_id=WP_001283499.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 458290 459540 . - . ID=gene-AD11_RS16540;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AD11_RS16540;old_locus_tag=AD11_2697 NZ_JJLL01000134.1 Protein Homology CDS 458290 459540 . - 0 ID=cds-WP_000106766.1;Parent=gene-AD11_RS16540;Dbxref=GenBank:WP_000106766.1;Name=WP_000106766.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AD11_RS16540;product=formyl-CoA transferase;protein_id=WP_000106766.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 460053 460688 . - . ID=gene-AD11_RS16545;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AD11_RS16545;old_locus_tag=AD11_2698 NZ_JJLL01000134.1 Protein Homology CDS 460053 460688 . - 0 ID=cds-WP_000825600.1;Parent=gene-AD11_RS16545;Dbxref=GenBank:WP_000825600.1;Name=WP_000825600.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416876.1;locus_tag=AD11_RS16545;product=YfdX family protein;protein_id=WP_000825600.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 460984 461259 . + . ID=gene-AD11_RS16550;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AD11_RS16550 NZ_JJLL01000134.1 Protein Homology CDS 460984 461259 . + 0 ID=cds-WP_000867631.1;Parent=gene-AD11_RS16550;Dbxref=GenBank:WP_000867631.1;Name=WP_000867631.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416877.1;locus_tag=AD11_RS16550;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867631.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 461285 461578 . - . ID=gene-AD11_RS16555;Name=AD11_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS16555;old_locus_tag=AD11_2700 NZ_JJLL01000134.1 Protein Homology CDS 461285 461578 . - 0 ID=cds-WP_024202541.1;Parent=gene-AD11_RS16555;Dbxref=GenBank:WP_024202541.1;Name=WP_024202541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416878.1;locus_tag=AD11_RS16555;product=YfdY family protein;protein_id=WP_024202541.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 461931 462851 . + . ID=gene-AD11_RS16560;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AD11_RS16560;old_locus_tag=AD11_2701 NZ_JJLL01000134.1 Protein Homology CDS 461931 462851 . + 0 ID=cds-WP_000484404.1;Parent=gene-AD11_RS16560;Dbxref=GenBank:WP_000484404.1;Name=WP_000484404.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AD11_RS16560;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_000484404.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 463207 463278 . + . ID=gene-AD11_RS30885;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AD11_RS30885 NZ_JJLL01000134.1 Protein Homology CDS 463207 463278 . + 0 ID=cds-WP_010723117.1;Parent=gene-AD11_RS30885;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AD11_RS30885;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 463343 464581 . - . ID=gene-AD11_RS16565;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AD11_RS16565;old_locus_tag=AD11_2703 NZ_JJLL01000134.1 Protein Homology CDS 463343 464581 . - 0 ID=cds-WP_000785931.1;Parent=gene-AD11_RS16565;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AD11_RS16565;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 464957 466654 . + . ID=gene-AD11_RS16570;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AD11_RS16570;old_locus_tag=AD11_2704 NZ_JJLL01000134.1 Protein Homology CDS 464957 466654 . + 0 ID=cds-WP_000544359.1;Parent=gene-AD11_RS16570;Dbxref=GenBank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AD11_RS16570;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 466669 467403 . + . ID=gene-AD11_RS16575;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AD11_RS16575;old_locus_tag=AD11_2705 NZ_JJLL01000134.1 Protein Homology CDS 466669 467403 . + 0 ID=cds-WP_032084206.1;Parent=gene-AD11_RS16575;Dbxref=GenBank:WP_032084206.1;Name=WP_032084206.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AD11_RS16575;product=two-component system response regulator YpdB;protein_id=WP_032084206.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 467416 468273 . + . ID=gene-AD11_RS16580;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=AD11_RS16580;old_locus_tag=AD11_2706 NZ_JJLL01000134.1 Protein Homology CDS 467416 468273 . + 0 ID=cds-WP_000646835.1;Parent=gene-AD11_RS16580;Dbxref=GenBank:WP_000646835.1;Name=WP_000646835.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ypdC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416883.1;locus_tag=AD11_RS16580;product=AraC family transcriptional regulator;protein_id=WP_000646835.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 468276 470771 . - . ID=gene-AD11_RS16585;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD11_RS16585;old_locus_tag=AD11_2707 NZ_JJLL01000134.1 Protein Homology CDS 468276 470771 . - 0 ID=cds-WP_001618737.1;Parent=gene-AD11_RS16585;Dbxref=GenBank:WP_001618737.1;Name=WP_001618737.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416884.1;locus_tag=AD11_RS16585;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001618737.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 470796 471833 . - . ID=gene-AD11_RS16590;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AD11_RS16590;old_locus_tag=AD11_2708 NZ_JJLL01000134.1 Protein Homology CDS 470796 471833 . - 0 ID=cds-WP_000366028.1;Parent=gene-AD11_RS16590;Dbxref=GenBank:WP_000366028.1;Name=WP_000366028.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416885.1;locus_tag=AD11_RS16590;product=aminopeptidase;protein_id=WP_000366028.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 471833 472918 . - . ID=gene-AD11_RS16595;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AD11_RS16595;old_locus_tag=AD11_2709 NZ_JJLL01000134.1 Protein Homology CDS 471833 472918 . - 0 ID=cds-WP_000173291.1;Parent=gene-AD11_RS16595;Dbxref=GenBank:WP_000173291.1;Name=WP_000173291.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=AD11_RS16595;product=aminopeptidase;protein_id=WP_000173291.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 472933 474180 . - . ID=gene-AD11_RS16600;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AD11_RS16600;old_locus_tag=AD11_2710 NZ_JJLL01000134.1 Protein Homology CDS 472933 474180 . - 0 ID=cds-WP_000985359.1;Parent=gene-AD11_RS16600;Dbxref=GenBank:WP_000985359.1;Name=WP_000985359.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416887.1;locus_tag=AD11_RS16600;product=PTS fructose transporter subunit IIC;protein_id=WP_000985359.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 474202 474528 . - . ID=gene-AD11_RS16605;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AD11_RS16605;old_locus_tag=AD11_2711 NZ_JJLL01000134.1 Protein Homology CDS 474202 474528 . - 0 ID=cds-WP_000038456.1;Parent=gene-AD11_RS16605;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AD11_RS16605;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 474747 475712 . - . ID=gene-AD11_RS16610;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AD11_RS16610;old_locus_tag=AD11_2712 NZ_JJLL01000134.1 Protein Homology CDS 474747 475712 . - 0 ID=cds-WP_000170346.1;Parent=gene-AD11_RS16610;Dbxref=GenBank:WP_000170346.1;Name=WP_000170346.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AD11_RS16610;product=glucokinase;protein_id=WP_000170346.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 475916 477172 . + . ID=gene-AD11_RS16615;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AD11_RS16615;old_locus_tag=AD11_2713 NZ_JJLL01000134.1 Protein Homology CDS 475916 477172 . + 0 ID=cds-WP_000903148.1;Parent=gene-AD11_RS16615;Dbxref=GenBank:WP_000903148.1;Name=WP_000903148.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AD11_RS16615;product=ion channel protein;protein_id=WP_000903148.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 477287 477613 . + . ID=gene-AD11_RS16620;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AD11_RS16620;old_locus_tag=AD11_2714 NZ_JJLL01000134.1 Protein Homology CDS 477287 477613 . + 0 ID=cds-WP_000490072.1;Parent=gene-AD11_RS16620;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AD11_RS16620;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 477754 478992 . - . ID=gene-AD11_RS16630;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AD11_RS16630;old_locus_tag=AD11_2715 NZ_JJLL01000134.1 Protein Homology CDS 477754 478992 . - 0 ID=cds-WP_024171020.1;Parent=gene-AD11_RS16630;Dbxref=GenBank:WP_024171020.1;Name=WP_024171020.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AD11_RS16630;product=Nramp family divalent metal transporter;protein_id=WP_024171020.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 478973 479062 . - . ID=gene-AD11_RS33220;Name=AD11_RS33220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33220 NZ_JJLL01000134.1 Protein Homology CDS 478973 479062 . - 0 ID=cds-WP_240811045.1;Parent=gene-AD11_RS33220;Dbxref=GenBank:WP_240811045.1;Name=WP_240811045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AD11_RS33220;product=protein YpeD;protein_id=WP_240811045.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 479328 480530 . + . ID=gene-AD11_RS16635;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AD11_RS16635;old_locus_tag=AD11_2716 NZ_JJLL01000134.1 Protein Homology CDS 479328 480530 . + 0 ID=cds-WP_000376337.1;Parent=gene-AD11_RS16635;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AD11_RS16635;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 480580 482769 . - . ID=gene-AD11_RS16640;Name=pdeA;gbkey=Gene;gene=pdeA;gene_biotype=protein_coding;locus_tag=AD11_RS16640;old_locus_tag=AD11_2717 NZ_JJLL01000134.1 Protein Homology CDS 480580 482769 . - 0 ID=cds-WP_000497400.1;Parent=gene-AD11_RS16640;Dbxref=GenBank:WP_000497400.1;Name=WP_000497400.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;gene=pdeA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AD11_RS16640;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000497400.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 482978 483053 . - . ID=gene-AD11_RS16645;Name=AD11_RS16645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16645;old_locus_tag=AD11_2718 NZ_JJLL01000134.1 tRNAscan-SE tRNA 482978 483053 . - . ID=rna-AD11_RS16645;Parent=gene-AD11_RS16645;anticodon=(pos:complement(483018..483020));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16645;product=tRNA-Ala NZ_JJLL01000134.1 tRNAscan-SE exon 482978 483053 . - . ID=exon-AD11_RS16645-1;Parent=rna-AD11_RS16645;anticodon=(pos:complement(483018..483020));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16645;product=tRNA-Ala NZ_JJLL01000134.1 RefSeq gene 483093 483168 . - . ID=gene-AD11_RS16650;Name=AD11_RS16650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16650;old_locus_tag=AD11_2719 NZ_JJLL01000134.1 tRNAscan-SE tRNA 483093 483168 . - . ID=rna-AD11_RS16650;Parent=gene-AD11_RS16650;anticodon=(pos:complement(483133..483135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16650;product=tRNA-Ala NZ_JJLL01000134.1 tRNAscan-SE exon 483093 483168 . - . ID=exon-AD11_RS16650-1;Parent=rna-AD11_RS16650;anticodon=(pos:complement(483133..483135));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16650;product=tRNA-Ala NZ_JJLL01000134.1 RefSeq gene 483208 483283 . - . ID=gene-AD11_RS16655;Name=AD11_RS16655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16655;old_locus_tag=AD11_2720 NZ_JJLL01000134.1 tRNAscan-SE tRNA 483208 483283 . - . ID=rna-AD11_RS16655;Parent=gene-AD11_RS16655;anticodon=(pos:complement(483248..483250));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16655;product=tRNA-Ala NZ_JJLL01000134.1 tRNAscan-SE exon 483208 483283 . - . ID=exon-AD11_RS16655-1;Parent=rna-AD11_RS16655;anticodon=(pos:complement(483248..483250));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16655;product=tRNA-Ala NZ_JJLL01000134.1 RefSeq gene 483323 483398 . - . ID=gene-AD11_RS16660;Name=AD11_RS16660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16660;old_locus_tag=AD11_2721 NZ_JJLL01000134.1 tRNAscan-SE tRNA 483323 483398 . - . ID=rna-AD11_RS16660;Parent=gene-AD11_RS16660;anticodon=(pos:complement(483363..483365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16660;product=tRNA-Ala NZ_JJLL01000134.1 tRNAscan-SE exon 483323 483398 . - . ID=exon-AD11_RS16660-1;Parent=rna-AD11_RS16660;anticodon=(pos:complement(483363..483365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16660;product=tRNA-Ala NZ_JJLL01000134.1 RefSeq gene 483619 483978 . + . ID=gene-AD11_RS16665;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AD11_RS16665;old_locus_tag=AD11_2722 NZ_JJLL01000134.1 Protein Homology CDS 483619 483978 . + 0 ID=cds-WP_000472021.1-2;Parent=gene-AD11_RS16665;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AD11_RS16665;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 483980 484372 . + . ID=gene-AD11_RS16670;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=AD11_RS16670;old_locus_tag=AD11_2723 NZ_JJLL01000134.1 Protein Homology CDS 483980 484372 . + 0 ID=cds-WP_000826503.1-2;Parent=gene-AD11_RS16670;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfeD;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AD11_RS16670;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 484424 485839 . - . ID=gene-AD11_RS16675;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AD11_RS16675;old_locus_tag=AD11_2724 NZ_JJLL01000134.1 Protein Homology CDS 484424 485839 . - 0 ID=cds-WP_000695655.1;Parent=gene-AD11_RS16675;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD11_RS16675;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 486097 486172 . + . ID=gene-AD11_RS16680;Name=AD11_RS16680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16680;old_locus_tag=AD11_2726 NZ_JJLL01000134.1 tRNAscan-SE tRNA 486097 486172 . + . ID=rna-AD11_RS16680;Parent=gene-AD11_RS16680;anticodon=(pos:486130..486132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16680;product=tRNA-Val NZ_JJLL01000134.1 tRNAscan-SE exon 486097 486172 . + . ID=exon-AD11_RS16680-1;Parent=rna-AD11_RS16680;anticodon=(pos:486130..486132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16680;product=tRNA-Val NZ_JJLL01000134.1 RefSeq gene 486217 486292 . + . ID=gene-AD11_RS16685;Name=AD11_RS16685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16685;old_locus_tag=AD11_2727 NZ_JJLL01000134.1 tRNAscan-SE tRNA 486217 486292 . + . ID=rna-AD11_RS16685;Parent=gene-AD11_RS16685;anticodon=(pos:486250..486252);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16685;product=tRNA-Val NZ_JJLL01000134.1 tRNAscan-SE exon 486217 486292 . + . ID=exon-AD11_RS16685-1;Parent=rna-AD11_RS16685;anticodon=(pos:486250..486252);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16685;product=tRNA-Val NZ_JJLL01000134.1 RefSeq gene 486339 486414 . + . ID=gene-AD11_RS16690;Name=AD11_RS16690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16690;old_locus_tag=AD11_2728 NZ_JJLL01000134.1 tRNAscan-SE tRNA 486339 486414 . + . ID=rna-AD11_RS16690;Parent=gene-AD11_RS16690;anticodon=(pos:486372..486374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16690;product=tRNA-Val NZ_JJLL01000134.1 tRNAscan-SE exon 486339 486414 . + . ID=exon-AD11_RS16690-1;Parent=rna-AD11_RS16690;anticodon=(pos:486372..486374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16690;product=tRNA-Val NZ_JJLL01000134.1 RefSeq gene 486461 486536 . + . ID=gene-AD11_RS16695;Name=AD11_RS16695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16695;old_locus_tag=AD11_2729 NZ_JJLL01000134.1 tRNAscan-SE tRNA 486461 486536 . + . ID=rna-AD11_RS16695;Parent=gene-AD11_RS16695;anticodon=(pos:486494..486496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16695;product=tRNA-Val NZ_JJLL01000134.1 tRNAscan-SE exon 486461 486536 . + . ID=exon-AD11_RS16695-1;Parent=rna-AD11_RS16695;anticodon=(pos:486494..486496);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16695;product=tRNA-Val NZ_JJLL01000134.1 RefSeq gene 486541 486616 . + . ID=gene-AD11_RS16700;Name=AD11_RS16700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS16700;old_locus_tag=AD11_2730 NZ_JJLL01000134.1 tRNAscan-SE tRNA 486541 486616 . + . ID=rna-AD11_RS16700;Parent=gene-AD11_RS16700;anticodon=(pos:486574..486576);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16700;product=tRNA-Lys NZ_JJLL01000134.1 tRNAscan-SE exon 486541 486616 . + . ID=exon-AD11_RS16700-1;Parent=rna-AD11_RS16700;anticodon=(pos:486574..486576);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS16700;product=tRNA-Lys NZ_JJLL01000134.1 RefSeq gene 486647 486772 . + . ID=gene-AD11_RS27655;Name=AD11_RS27655;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27655 NZ_JJLL01000134.1 cmsearch ncRNA 486647 486772 . + . ID=rna-AD11_RS27655;Parent=gene-AD11_RS27655;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27655;product=RtT sRNA NZ_JJLL01000134.1 cmsearch exon 486647 486772 . + . ID=exon-AD11_RS27655-1;Parent=rna-AD11_RS27655;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27655;product=RtT sRNA NZ_JJLL01000134.1 RefSeq gene 486881 487765 . - . ID=gene-AD11_RS16705;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AD11_RS16705;old_locus_tag=AD11_2731 NZ_JJLL01000134.1 Protein Homology CDS 486881 487765 . - 0 ID=cds-WP_000442949.1;Parent=gene-AD11_RS16705;Dbxref=GenBank:WP_000442949.1;Name=WP_000442949.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=AD11_RS16705;product=DNA-binding transcriptional regulator XapR;protein_id=WP_000442949.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 487806 487964 . - . ID=gene-AD11_RS16710;Name=AD11_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS16710;old_locus_tag=AD11_2732 NZ_JJLL01000134.1 Protein Homology CDS 487806 487964 . - 0 ID=cds-WP_000651752.1;Parent=gene-AD11_RS16710;Dbxref=GenBank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=AD11_RS16710;product=DUF1427 family protein;protein_id=WP_000651752.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 488017 489273 . - . ID=gene-AD11_RS16715;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;locus_tag=AD11_RS16715;old_locus_tag=AD11_2733 NZ_JJLL01000134.1 Protein Homology CDS 488017 489273 . - 0 ID=cds-WP_000020402.1;Parent=gene-AD11_RS16715;Dbxref=GenBank:WP_000020402.1;Name=WP_000020402.1;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416901.1;locus_tag=AD11_RS16715;product=xanthosine/proton symporter XapB;protein_id=WP_000020402.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 489333 490166 . - . ID=gene-AD11_RS16720;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AD11_RS16720;old_locus_tag=AD11_2734 NZ_JJLL01000134.1 Protein Homology CDS 489333 490166 . - 0 ID=cds-WP_000084573.1;Parent=gene-AD11_RS16720;Dbxref=GenBank:WP_000084573.1;Name=WP_000084573.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416902.1;locus_tag=AD11_RS16720;product=xanthosine phosphorylase;protein_id=WP_000084573.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 490415 491179 . + . ID=gene-AD11_RS16725;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;locus_tag=AD11_RS16725;old_locus_tag=AD11_2735 NZ_JJLL01000134.1 Protein Homology CDS 490415 491179 . + 0 ID=cds-WP_000716421.1;Parent=gene-AD11_RS16725;Dbxref=GenBank:WP_000716421.1;Name=WP_000716421.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yfeN;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=AD11_RS16725;product=outer membrane protein OmpK;protein_id=WP_000716421.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 491218 492144 . - . ID=gene-AD11_RS16730;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=AD11_RS16730;old_locus_tag=AD11_2736 NZ_JJLL01000134.1 Protein Homology CDS 491218 492144 . - 0 ID=cds-WP_033865662.1;Parent=gene-AD11_RS16730;Dbxref=GenBank:WP_033865662.1;Name=WP_033865662.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=yfeR;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AD11_RS16730;product=LysR family transcriptional regulator;protein_id=WP_033865662.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 492234 493232 . + . ID=gene-AD11_RS16735;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=AD11_RS16735;old_locus_tag=AD11_2737 NZ_JJLL01000134.1 Protein Homology CDS 492234 493232 . + 0 ID=cds-WP_000765610.1;Parent=gene-AD11_RS16735;Dbxref=GenBank:WP_000765610.1;Name=WP_000765610.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;gene=yfeH;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416905.1;locus_tag=AD11_RS16735;product=bile acid:sodium symporter family protein;protein_id=WP_000765610.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 493229 493447 . - . ID=gene-AD11_RS16740;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=AD11_RS16740;old_locus_tag=AD11_2738 NZ_JJLL01000134.1 Protein Homology CDS 493229 493447 . - 0 ID=cds-WP_000410201.1;Parent=gene-AD11_RS16740;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AD11_RS16740;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 493449 495464 . - . ID=gene-AD11_RS16745;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AD11_RS16745;old_locus_tag=AD11_2739 NZ_JJLL01000134.1 Protein Homology CDS 493449 495464 . - 0 ID=cds-WP_000443661.1;Parent=gene-AD11_RS16745;Dbxref=GenBank:WP_000443661.1;Name=WP_000443661.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AD11_RS16745;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443661.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 495535 496521 . - . ID=gene-AD11_RS16750;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AD11_RS16750;old_locus_tag=AD11_2740 NZ_JJLL01000134.1 Protein Homology CDS 495535 496521 . - 0 ID=cds-WP_001424320.1;Parent=gene-AD11_RS16750;Dbxref=GenBank:WP_001424320.1;Name=WP_001424320.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416907.1;locus_tag=AD11_RS16750;product=cell division protein ZipA;protein_id=WP_001424320.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 496751 497512 . + . ID=gene-AD11_RS16755;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AD11_RS16755;old_locus_tag=AD11_2741 NZ_JJLL01000134.1 Protein Homology CDS 496751 497512 . + 0 ID=cds-WP_000254839.1;Parent=gene-AD11_RS16755;Dbxref=GenBank:WP_000254839.1;Name=WP_000254839.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AD11_RS16755;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 497697 498668 . + . ID=gene-AD11_RS16760;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AD11_RS16760;old_locus_tag=AD11_2742 NZ_JJLL01000134.1 Protein Homology CDS 497697 498668 . + 0 ID=cds-WP_000034402.1;Parent=gene-AD11_RS16760;Dbxref=GenBank:WP_000034402.1;Name=WP_000034402.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AD11_RS16760;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 499052 499309 . + . ID=gene-AD11_RS16765;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AD11_RS16765;old_locus_tag=AD11_2743 NZ_JJLL01000134.1 Protein Homology CDS 499052 499309 . + 0 ID=cds-WP_000487600.1;Parent=gene-AD11_RS16765;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AD11_RS16765;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 499354 501081 . + . ID=gene-AD11_RS16770;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AD11_RS16770;old_locus_tag=AD11_2744 NZ_JJLL01000134.1 Protein Homology CDS 499354 501081 . + 0 ID=cds-WP_033865663.1;Parent=gene-AD11_RS16770;Dbxref=GenBank:WP_033865663.1;Name=WP_033865663.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416911.1;locus_tag=AD11_RS16770;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_033865663.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 501122 501631 . + . ID=gene-AD11_RS16775;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AD11_RS16775;old_locus_tag=AD11_2745 NZ_JJLL01000134.1 Protein Homology CDS 501122 501631 . + 0 ID=cds-WP_000522247.1;Parent=gene-AD11_RS16775;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AD11_RS16775;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 501674 502525 . - . ID=gene-AD11_RS16780;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AD11_RS16780;old_locus_tag=AD11_2746 NZ_JJLL01000134.1 Protein Homology CDS 501674 502525 . - 0 ID=cds-WP_000096674.1;Parent=gene-AD11_RS16780;Dbxref=GenBank:WP_000096674.1;Name=WP_000096674.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416913.1;locus_tag=AD11_RS16780;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096674.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 502630 503004 . + . ID=gene-AD11_RS16785;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=AD11_RS16785;old_locus_tag=AD11_2747 NZ_JJLL01000134.1 Protein Homology CDS 502630 503004 . + 0 ID=cds-WP_000719962.1;Parent=gene-AD11_RS16785;Dbxref=GenBank:WP_000719962.1;Name=WP_000719962.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416914.1;locus_tag=AD11_RS16785;product=YfeK family protein;protein_id=WP_000719962.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 503037 503771 . + . ID=gene-AD11_RS16790;Name=yfeS;gbkey=Gene;gene=yfeS;gene_biotype=protein_coding;locus_tag=AD11_RS16790;old_locus_tag=AD11_2748 NZ_JJLL01000134.1 Protein Homology CDS 503037 503771 . + 0 ID=cds-WP_000745534.1;Parent=gene-AD11_RS16790;Dbxref=GenBank:WP_000745534.1;Name=WP_000745534.1;gbkey=CDS;gene=yfeS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416915.1;locus_tag=AD11_RS16790;product=WGR domain-containing protein;protein_id=WP_000745534.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 503960 504871 . - . ID=gene-AD11_RS16795;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AD11_RS16795;old_locus_tag=AD11_2749 NZ_JJLL01000134.1 Protein Homology CDS 503960 504871 . - 0 ID=cds-WP_000105477.1;Parent=gene-AD11_RS16795;Dbxref=GenBank:WP_000105477.1;Name=WP_000105477.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AD11_RS16795;product=cysteine synthase B;protein_id=WP_000105477.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 505005 506102 . - . ID=gene-AD11_RS16800;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AD11_RS16800;old_locus_tag=AD11_2750 NZ_JJLL01000134.1 Protein Homology CDS 505005 506102 . - 0 ID=cds-WP_000021019.1;Parent=gene-AD11_RS16800;Dbxref=GenBank:WP_000021019.1;Name=WP_000021019.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AD11_RS16800;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021019.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 506092 506967 . - . ID=gene-AD11_RS16805;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AD11_RS16805;old_locus_tag=AD11_2751 NZ_JJLL01000134.1 Protein Homology CDS 506092 506967 . - 0 ID=cds-WP_000852696.1;Parent=gene-AD11_RS16805;Dbxref=GenBank:WP_000852696.1;Name=WP_000852696.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AD11_RS16805;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852696.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 506967 507800 . - . ID=gene-AD11_RS16810;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AD11_RS16810;old_locus_tag=AD11_2752 NZ_JJLL01000134.1 Protein Homology CDS 506967 507800 . - 0 ID=cds-WP_000458418.1;Parent=gene-AD11_RS16810;Dbxref=GenBank:WP_000458418.1;Name=WP_000458418.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AD11_RS16810;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458418.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 507800 508816 . - . ID=gene-AD11_RS16815;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AD11_RS16815;old_locus_tag=AD11_2753 NZ_JJLL01000134.1 Protein Homology CDS 507800 508816 . - 0 ID=cds-WP_000290224.1;Parent=gene-AD11_RS16815;Dbxref=GenBank:WP_000290224.1;Name=WP_000290224.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311323.1;locus_tag=AD11_RS16815;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_000290224.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 509120 509911 . - . ID=gene-AD11_RS16820;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AD11_RS16820;old_locus_tag=AD11_2754 NZ_JJLL01000134.1 Protein Homology CDS 509120 509911 . - 0 ID=cds-WP_000517428.1;Parent=gene-AD11_RS16820;Dbxref=GenBank:WP_000517428.1;Name=WP_000517428.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311324.2;locus_tag=AD11_RS16820;product=SDR family oxidoreductase UcpA;protein_id=WP_000517428.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 510040 510897 . - . ID=gene-AD11_RS16825;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AD11_RS16825;old_locus_tag=AD11_2755 NZ_JJLL01000134.1 Protein Homology CDS 510040 510897 . - 0 ID=cds-WP_000966478.1;Parent=gene-AD11_RS16825;Dbxref=GenBank:WP_000966478.1;Name=WP_000966478.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=AD11_RS16825;product=HTH-type transcriptional regulator MurR;protein_id=WP_000966478.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 511061 511957 . + . ID=gene-AD11_RS16830;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AD11_RS16830;old_locus_tag=AD11_2756 NZ_JJLL01000134.1 Protein Homology CDS 511061 511957 . + 0 ID=cds-WP_001175611.1;Parent=gene-AD11_RS16830;Dbxref=GenBank:WP_001175611.1;Name=WP_001175611.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311326.1;locus_tag=AD11_RS16830;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001175611.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 511961 513385 . + . ID=gene-AD11_RS16835;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AD11_RS16835;old_locus_tag=AD11_2757 NZ_JJLL01000134.1 Protein Homology CDS 511961 513385 . + 0 ID=cds-WP_001040483.1;Parent=gene-AD11_RS16835;Dbxref=GenBank:WP_001040483.1;Name=WP_001040483.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AD11_RS16835;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040483.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 513390 514694 . + . ID=gene-AD11_RS16840;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AD11_RS16840;old_locus_tag=AD11_2758 NZ_JJLL01000134.1 Protein Homology CDS 513390 514694 . + 0 ID=cds-WP_001327042.1;Parent=gene-AD11_RS16840;Dbxref=GenBank:WP_001327042.1;Name=WP_001327042.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416925.2;locus_tag=AD11_RS16840;product=penicillin binding protein PBP4B;protein_id=WP_001327042.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 514934 515833 . - . ID=gene-AD11_RS16845;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AD11_RS16845;old_locus_tag=AD11_2759 NZ_JJLL01000134.1 Protein Homology CDS 514934 515833 . - 0 ID=cds-WP_000084590.1;Parent=gene-AD11_RS16845;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AD11_RS16845;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 515929 516504 . - . ID=gene-AD11_RS16850;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=AD11_RS16850;old_locus_tag=AD11_2760 NZ_JJLL01000134.1 Protein Homology CDS 515929 516504 . - 0 ID=cds-WP_000838944.1;Parent=gene-AD11_RS16850;Dbxref=GenBank:WP_000838944.1;Name=WP_000838944.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416927.1;locus_tag=AD11_RS16850;product=RpoE-regulated lipoprotein;protein_id=WP_000838944.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 516565 517014 . - . ID=gene-AD11_RS16855;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=AD11_RS16855;old_locus_tag=AD11_2761 NZ_JJLL01000134.1 Protein Homology CDS 516565 517014 . - 0 ID=cds-WP_000842944.1;Parent=gene-AD11_RS16855;Dbxref=GenBank:WP_000842944.1;Name=WP_000842944.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AD11_RS16855;product=DUF2919 domain-containing protein;protein_id=WP_000842944.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 517001 517426 . - . ID=gene-AD11_RS16860;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=AD11_RS16860;old_locus_tag=AD11_2762 NZ_JJLL01000134.1 Protein Homology CDS 517001 517426 . - 0 ID=cds-WP_000405996.1;Parent=gene-AD11_RS16860;Dbxref=GenBank:WP_000405996.1;Name=WP_000405996.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416929.4;locus_tag=AD11_RS16860;product=GNAT family acetyltransferase;protein_id=WP_000405996.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 517640 518509 . + . ID=gene-AD11_RS16865;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AD11_RS16865;old_locus_tag=AD11_2763 NZ_JJLL01000134.1 Protein Homology CDS 517640 518509 . + 0 ID=cds-WP_000102886.1;Parent=gene-AD11_RS16865;Dbxref=GenBank:WP_000102886.1;Name=WP_000102886.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416930.1;locus_tag=AD11_RS16865;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102886.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 518513 519412 . + . ID=gene-AD11_RS16870;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AD11_RS16870;old_locus_tag=AD11_2764 NZ_JJLL01000134.1 Protein Homology CDS 518513 519412 . + 0 ID=cds-WP_000801365.1;Parent=gene-AD11_RS16870;Dbxref=GenBank:WP_000801365.1;Name=WP_000801365.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416931.1;locus_tag=AD11_RS16870;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801365.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 519418 520470 . - . ID=gene-AD11_RS16875;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AD11_RS16875;old_locus_tag=AD11_2765 NZ_JJLL01000134.1 Protein Homology CDS 519418 520470 . - 0 ID=cds-WP_000753690.1;Parent=gene-AD11_RS16875;Dbxref=GenBank:WP_000753690.1;Name=WP_000753690.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416932.1;locus_tag=AD11_RS16875;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753690.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 520516 521016 . - . ID=gene-AD11_RS16880;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AD11_RS16880;old_locus_tag=AD11_2766 NZ_JJLL01000134.1 Protein Homology CDS 520516 521016 . - 0 ID=cds-WP_000606257.1;Parent=gene-AD11_RS16880;Dbxref=GenBank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AD11_RS16880;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 521029 521688 . - . ID=gene-AD11_RS16885;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AD11_RS16885;old_locus_tag=AD11_2767 NZ_JJLL01000134.1 Protein Homology CDS 521029 521688 . - 0 ID=cds-WP_001111033.1;Parent=gene-AD11_RS16885;Dbxref=GenBank:WP_001111033.1;Name=WP_001111033.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416934.1;locus_tag=AD11_RS16885;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111033.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 521698 522585 . - . ID=gene-AD11_RS16890;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AD11_RS16890;old_locus_tag=AD11_2768 NZ_JJLL01000134.1 Protein Homology CDS 521698 522585 . - 0 ID=cds-WP_000372364.1;Parent=gene-AD11_RS16890;Dbxref=GenBank:WP_000372364.1;Name=WP_000372364.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AD11_RS16890;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372364.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 522606 523965 . - . ID=gene-AD11_RS16895;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=pseudogene;locus_tag=AD11_RS16895;old_locus_tag=AD11_2770;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 522606 523965 . - 0 ID=cds-AD11_RS16895;Parent=gene-AD11_RS16895;Note=frameshifted;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AD11_RS16895;product=ethanolamine ammonia-lyase subunit alpha;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 523977 525380 . - . ID=gene-AD11_RS16900;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=AD11_RS16900;old_locus_tag=AD11_2771 NZ_JJLL01000134.1 Protein Homology CDS 523977 525380 . - 0 ID=cds-WP_032083729.1;Parent=gene-AD11_RS16900;Dbxref=GenBank:WP_032083729.1;Name=WP_032083729.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311340.1;locus_tag=AD11_RS16900;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_032083729.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 525377 526603 . - . ID=gene-AD11_RS16905;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AD11_RS16905;old_locus_tag=AD11_2772 NZ_JJLL01000134.1 Protein Homology CDS 525377 526603 . - 0 ID=cds-WP_000512372.1;Parent=gene-AD11_RS16905;Dbxref=GenBank:WP_000512372.1;Name=WP_000512372.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=AD11_RS16905;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 526820 528007 . - . ID=gene-AD11_RS16910;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=AD11_RS16910;old_locus_tag=AD11_2773 NZ_JJLL01000134.1 Protein Homology CDS 526820 528007 . - 0 ID=cds-WP_001300552.1;Parent=gene-AD11_RS16910;Dbxref=GenBank:WP_001300552.1;Name=WP_001300552.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311342.2;locus_tag=AD11_RS16910;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001300552.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 527997 528833 . - . ID=gene-AD11_RS16915;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AD11_RS16915;old_locus_tag=AD11_2774 NZ_JJLL01000134.1 Protein Homology CDS 527997 528833 . - 0 ID=cds-WP_033865666.1;Parent=gene-AD11_RS16915;Dbxref=GenBank:WP_033865666.1;Name=WP_033865666.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AD11_RS16915;product=ethanolamine utilization protein EutJ;protein_id=WP_033865666.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 528844 530199 . - . ID=gene-AD11_RS16920;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AD11_RS16920 NZ_JJLL01000134.1 Protein Homology CDS 528844 530199 . - 0 ID=cds-WP_248784884.1;Parent=gene-AD11_RS16920;Dbxref=GenBank:WP_248784884.1;Name=WP_248784884.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;gene=eutE;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000237647.1;locus_tag=AD11_RS16920;product=aldehyde dehydrogenase family protein;protein_id=WP_248784884.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 530259 530546 . - . ID=gene-AD11_RS16925;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AD11_RS16925;old_locus_tag=AD11_2776 NZ_JJLL01000134.1 Protein Homology CDS 530259 530546 . - 0 ID=cds-WP_000762196.1;Parent=gene-AD11_RS16925;Dbxref=GenBank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AD11_RS16925;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 530653 530946 . - . ID=gene-AD11_RS16930;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AD11_RS16930;old_locus_tag=AD11_2777 NZ_JJLL01000134.1 Protein Homology CDS 530653 530946 . - 0 ID=cds-WP_000387713.1;Parent=gene-AD11_RS16930;Dbxref=GenBank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AD11_RS16930;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 530985 532001 . - . ID=gene-AD11_RS16935;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AD11_RS16935;old_locus_tag=AD11_2778 NZ_JJLL01000134.1 Protein Homology CDS 530985 532001 . - 0 ID=cds-WP_000582977.1;Parent=gene-AD11_RS16935;Dbxref=GenBank:WP_000582977.1;Name=WP_000582977.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AD11_RS16935;product=phosphate acetyltransferase;protein_id=WP_000582977.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 531998 532801 . - . ID=gene-AD11_RS16940;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AD11_RS16940;old_locus_tag=AD11_2779 NZ_JJLL01000134.1 Protein Homology CDS 531998 532801 . - 0 ID=cds-WP_000651298.1;Parent=gene-AD11_RS16940;Dbxref=GenBank:WP_000651298.1;Name=WP_000651298.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=AD11_RS16940;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651298.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 532798 533499 . - . ID=gene-AD11_RS16945;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AD11_RS16945;old_locus_tag=AD11_2780 NZ_JJLL01000134.1 Protein Homology CDS 532798 533499 . - 0 ID=cds-WP_000733906.1;Parent=gene-AD11_RS16945;Dbxref=GenBank:WP_000733906.1;Name=WP_000733906.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AD11_RS16945;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733906.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 533474 533953 . - . ID=gene-AD11_RS16950;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=AD11_RS16950;old_locus_tag=AD11_2781 NZ_JJLL01000134.1 Protein Homology CDS 533474 533953 . - 0 ID=cds-WP_000820762.1;Parent=gene-AD11_RS16950;Dbxref=GenBank:WP_000820762.1;Name=WP_000820762.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416956.1;locus_tag=AD11_RS16950;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_000820762.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 533966 534301 . - . ID=gene-AD11_RS16955;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=AD11_RS16955;old_locus_tag=AD11_2782 NZ_JJLL01000134.1 Protein Homology CDS 533966 534301 . - 0 ID=cds-WP_000356956.1;Parent=gene-AD11_RS16955;Dbxref=GenBank:WP_000356956.1;Name=WP_000356956.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311351.2;locus_tag=AD11_RS16955;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_000356956.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 534594 536873 . - . ID=gene-AD11_RS16960;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AD11_RS16960;old_locus_tag=AD11_2783 NZ_JJLL01000134.1 Protein Homology CDS 534594 536873 . - 0 ID=cds-WP_000342644.1;Parent=gene-AD11_RS16960;Dbxref=GenBank:WP_000342644.1;Name=WP_000342644.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416958.1;locus_tag=AD11_RS16960;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342644.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 537162 538112 . + . ID=gene-AD11_RS16965;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AD11_RS16965;old_locus_tag=AD11_2784 NZ_JJLL01000134.1 Protein Homology CDS 537162 538112 . + 0 ID=cds-WP_001003709.1;Parent=gene-AD11_RS16965;Dbxref=GenBank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AD11_RS16965;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 538132 540135 . + . ID=gene-AD11_RS16970;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AD11_RS16970;old_locus_tag=AD11_2785 NZ_JJLL01000134.1 Protein Homology CDS 538132 540135 . + 0 ID=cds-WP_000087280.1;Parent=gene-AD11_RS16970;Dbxref=GenBank:WP_000087280.1;Name=WP_000087280.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=AD11_RS16970;product=transketolase;protein_id=WP_000087280.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 540230 541273 . - . ID=gene-AD11_RS16975;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AD11_RS16975;old_locus_tag=AD11_2786 NZ_JJLL01000134.1 Protein Homology CDS 540230 541273 . - 0 ID=cds-WP_001270542.1;Parent=gene-AD11_RS16975;Dbxref=GenBank:WP_001270542.1;Name=WP_001270542.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416961.1;locus_tag=AD11_RS16975;product=DUF1176 domain-containing protein;protein_id=WP_001270542.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 541399 541974 . - . ID=gene-AD11_RS16980;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AD11_RS16980;old_locus_tag=AD11_2787 NZ_JJLL01000134.1 Protein Homology CDS 541399 541974 . - 0 ID=cds-WP_001410763.1;Parent=gene-AD11_RS16980;Dbxref=GenBank:WP_001410763.1;Name=WP_001410763.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311356.1;locus_tag=AD11_RS16980;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_001410763.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 542042 544021 . - . ID=gene-AD11_RS16985;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AD11_RS16985;old_locus_tag=AD11_2788 NZ_JJLL01000134.1 Protein Homology CDS 542042 544021 . - 0 ID=cds-WP_001078880.1;Parent=gene-AD11_RS16985;Dbxref=GenBank:WP_001078880.1;Name=WP_001078880.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AD11_RS16985;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_001078880.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 544227 545927 . + . ID=gene-AD11_RS16990;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AD11_RS16990;old_locus_tag=AD11_2789 NZ_JJLL01000134.1 Protein Homology CDS 544227 545927 . + 0 ID=cds-WP_001300881.1;Parent=gene-AD11_RS16990;Dbxref=GenBank:WP_001300881.1;Name=WP_001300881.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AD11_RS16990;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_001300881.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 546091 549204 . + . ID=gene-AD11_RS16995;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AD11_RS16995;old_locus_tag=AD11_2790 NZ_JJLL01000134.1 Protein Homology CDS 546091 549204 . + 0 ID=cds-WP_001618744.1;Parent=gene-AD11_RS16995;Dbxref=GenBank:WP_001618744.1;Name=WP_001618744.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AD11_RS16995;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001618744.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 549303 549362 . - . ID=gene-AD11_RS30900;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AD11_RS30900 NZ_JJLL01000134.1 Protein Homology CDS 549303 549362 . - 0 ID=cds-WP_001386977.1;Parent=gene-AD11_RS30900;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AD11_RS30900;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 549743 550099 . + . ID=gene-AD11_RS17005;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AD11_RS17005;old_locus_tag=AD11_2791 NZ_JJLL01000134.1 Protein Homology CDS 549743 550099 . + 0 ID=cds-WP_000258236.1;Parent=gene-AD11_RS17005;Dbxref=GenBank:WP_000258236.1;Name=WP_000258236.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416966.1;locus_tag=AD11_RS17005;product=ArsC family reductase;protein_id=WP_000258236.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 550103 551230 . + . ID=gene-AD11_RS17010;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AD11_RS17010;old_locus_tag=AD11_2792 NZ_JJLL01000134.1 Protein Homology CDS 550103 551230 . + 0 ID=cds-WP_001277801.1;Parent=gene-AD11_RS17010;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AD11_RS17010;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 551258 551458 . + . ID=gene-AD11_RS17015;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AD11_RS17015;old_locus_tag=AD11_2793 NZ_JJLL01000134.1 Protein Homology CDS 551258 551458 . + 0 ID=cds-WP_000383836.1;Parent=gene-AD11_RS17015;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AD11_RS17015;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 551568 552266 . - . ID=gene-AD11_RS17020;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AD11_RS17020;old_locus_tag=AD11_2794 NZ_JJLL01000134.1 Protein Homology CDS 551568 552266 . - 0 ID=cds-WP_000679812.1;Parent=gene-AD11_RS17020;Dbxref=GenBank:WP_000679812.1;Name=WP_000679812.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311362.2;locus_tag=AD11_RS17020;product=esterase;protein_id=WP_000679812.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 552340 554355 . - . ID=gene-AD11_RS17025;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AD11_RS17025;old_locus_tag=AD11_2795 NZ_JJLL01000134.1 Protein Homology CDS 552340 554355 . - 0 ID=cds-WP_033866464.1;Parent=gene-AD11_RS17025;Dbxref=GenBank:WP_033866464.1;Name=WP_033866464.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708313.1;locus_tag=AD11_RS17025;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_033866464.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 554370 555233 . - . ID=gene-AD11_RS17030;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AD11_RS17030;old_locus_tag=AD11_2796 NZ_JJLL01000134.1 Protein Homology CDS 554370 555233 . - 0 ID=cds-WP_001267498.1;Parent=gene-AD11_RS17030;Dbxref=GenBank:WP_001267498.1;Name=WP_001267498.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AD11_RS17030;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267498.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 555401 556114 . - . ID=gene-AD11_RS17035;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AD11_RS17035;old_locus_tag=AD11_2797 NZ_JJLL01000134.1 Protein Homology CDS 555401 556114 . - 0 ID=cds-WP_001295467.1;Parent=gene-AD11_RS17035;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AD11_RS17035;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 556327 557361 . - . ID=gene-AD11_RS17045;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AD11_RS17045;old_locus_tag=AD11_2798 NZ_JJLL01000134.1 Protein Homology CDS 556327 557361 . - 0 ID=cds-WP_001297320.1;Parent=gene-AD11_RS17045;Dbxref=GenBank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AD11_RS17045;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 557378 558256 . - . ID=gene-AD11_RS17050;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AD11_RS17050;old_locus_tag=AD11_2799 NZ_JJLL01000134.1 Protein Homology CDS 557378 558256 . - 0 ID=cds-WP_001311023.1;Parent=gene-AD11_RS17050;Dbxref=GenBank:WP_001311023.1;Name=WP_001311023.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AD11_RS17050;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001311023.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 558402 558974 . + . ID=gene-AD11_RS17055;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AD11_RS17055;old_locus_tag=AD11_2800 NZ_JJLL01000134.1 Protein Homology CDS 558402 558974 . + 0 ID=cds-WP_000176187.1;Parent=gene-AD11_RS17055;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AD11_RS17055;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 558974 559444 . + . ID=gene-AD11_RS17060;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AD11_RS17060;old_locus_tag=AD11_2801 NZ_JJLL01000134.1 Protein Homology CDS 558974 559444 . + 0 ID=cds-WP_001068682.1;Parent=gene-AD11_RS17060;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AD11_RS17060;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 559697 560314 . + . ID=gene-AD11_RS17065;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AD11_RS17065;old_locus_tag=AD11_2802 NZ_JJLL01000134.1 Protein Homology CDS 559697 560314 . + 0 ID=cds-WP_001405567.1;Parent=gene-AD11_RS17065;Dbxref=GenBank:WP_001405567.1;Name=WP_001405567.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416976.4;locus_tag=AD11_RS17065;product=hydrogenase 4 subunit HyfA;protein_id=WP_001405567.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 560314 562332 . + . ID=gene-AD11_RS17070;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=AD11_RS17070;old_locus_tag=AD11_2803 NZ_JJLL01000134.1 Protein Homology CDS 560314 562332 . + 0 ID=cds-WP_000339450.1;Parent=gene-AD11_RS17070;Dbxref=GenBank:WP_000339450.1;Name=WP_000339450.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311371.1;locus_tag=AD11_RS17070;product=hydrogenase 4 subunit B;protein_id=WP_000339450.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 562343 563302 . + . ID=gene-AD11_RS17075;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AD11_RS17075;old_locus_tag=AD11_2804 NZ_JJLL01000134.1 Protein Homology CDS 562343 563302 . + 0 ID=cds-WP_032083829.1;Parent=gene-AD11_RS17075;Dbxref=GenBank:WP_032083829.1;Name=WP_032083829.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311372.2;locus_tag=AD11_RS17075;product=hydrogenase 4 subunit HyfC;protein_id=WP_032083829.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 563319 564758 . + . ID=gene-AD11_RS17080;Name=hyfD;gbkey=Gene;gene=hyfD;gene_biotype=protein_coding;locus_tag=AD11_RS17080;old_locus_tag=AD11_2805 NZ_JJLL01000134.1 Protein Homology CDS 563319 564758 . + 0 ID=cds-WP_033865668.1;Parent=gene-AD11_RS17080;Dbxref=GenBank:WP_033865668.1;Name=WP_033865668.1;gbkey=CDS;gene=hyfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AD11_RS17080;product=hydrogenase 4 subunit HyfD;protein_id=WP_033865668.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 564770 565420 . + . ID=gene-AD11_RS17085;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AD11_RS17085;old_locus_tag=AD11_2806 NZ_JJLL01000134.1 Protein Homology CDS 564770 565420 . + 0 ID=cds-WP_000147987.1;Parent=gene-AD11_RS17085;Dbxref=GenBank:WP_000147987.1;Name=WP_000147987.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AD11_RS17085;product=hydrogenase 4 membrane subunit;protein_id=WP_000147987.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 565425 567005 . + . ID=gene-AD11_RS17090;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AD11_RS17090;old_locus_tag=AD11_2807 NZ_JJLL01000134.1 Protein Homology CDS 565425 567005 . + 0 ID=cds-WP_033866465.1;Parent=gene-AD11_RS17090;Dbxref=GenBank:WP_033866465.1;Name=WP_033866465.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416981.1;locus_tag=AD11_RS17090;product=hydrogenase 4 subunit F;protein_id=WP_033866465.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 566995 568662 . + . ID=gene-AD11_RS17095;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AD11_RS17095;old_locus_tag=AD11_2808 NZ_JJLL01000134.1 Protein Homology CDS 566995 568662 . + 0 ID=cds-WP_001102321.1;Parent=gene-AD11_RS17095;Dbxref=GenBank:WP_001102321.1;Name=WP_001102321.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AD11_RS17095;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_001102321.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 568672 569211 . + . ID=gene-AD11_RS17100;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AD11_RS17100;old_locus_tag=AD11_2809 NZ_JJLL01000134.1 Protein Homology CDS 568672 569211 . + 0 ID=cds-WP_000916086.1;Parent=gene-AD11_RS17100;Dbxref=GenBank:WP_000916086.1;Name=WP_000916086.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416983.1;locus_tag=AD11_RS17100;product=hydrogenase 4 subunit H;protein_id=WP_000916086.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 569208 569966 . + . ID=gene-AD11_RS17105;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AD11_RS17105;old_locus_tag=AD11_2810 NZ_JJLL01000134.1 Protein Homology CDS 569208 569966 . + 0 ID=cds-WP_000075541.1;Parent=gene-AD11_RS17105;Dbxref=GenBank:WP_000075541.1;Name=WP_000075541.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416984.1;locus_tag=AD11_RS17105;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_000075541.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 569959 570372 . + . ID=gene-AD11_RS17110;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AD11_RS17110;old_locus_tag=AD11_2811 NZ_JJLL01000134.1 Protein Homology CDS 569959 570372 . + 0 ID=cds-WP_001300799.1;Parent=gene-AD11_RS17110;Dbxref=GenBank:WP_001300799.1;Name=WP_001300799.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001688773.1;locus_tag=AD11_RS17110;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_001300799.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 570402 572414 . + . ID=gene-AD11_RS17115;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AD11_RS17115;old_locus_tag=AD11_2812 NZ_JJLL01000134.1 Protein Homology CDS 570402 572414 . + 0 ID=cds-WP_001251538.1;Parent=gene-AD11_RS17115;Dbxref=GenBank:WP_001251538.1;Name=WP_001251538.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416986.4;locus_tag=AD11_RS17115;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_001251538.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 572436 573277 . + . ID=gene-AD11_RS17120;Name=focB;gbkey=Gene;gene=focB;gene_biotype=pseudogene;locus_tag=AD11_RS17120;old_locus_tag=AD11_2813;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 572436 573277 . + 0 ID=cds-AD11_RS17120;Parent=gene-AD11_RS17120;Note=frameshifted;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=AD11_RS17120;product=formate transporter FocB;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 573315 574376 . - . ID=gene-AD11_RS17125;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AD11_RS17125;old_locus_tag=AD11_2814 NZ_JJLL01000134.1 Protein Homology CDS 573315 574376 . - 0 ID=cds-WP_000892044.1;Parent=gene-AD11_RS17125;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AD11_RS17125;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 574589 576052 . + . ID=gene-AD11_RS17130;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AD11_RS17130;old_locus_tag=AD11_2815 NZ_JJLL01000134.1 Protein Homology CDS 574589 576052 . + 0 ID=cds-WP_000489667.1;Parent=gene-AD11_RS17130;Dbxref=GenBank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AD11_RS17130;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 576073 576432 . + . ID=gene-AD11_RS17135;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AD11_RS17135;old_locus_tag=AD11_2816 NZ_JJLL01000134.1 Protein Homology CDS 576073 576432 . + 0 ID=cds-WP_000166449.1;Parent=gene-AD11_RS17135;Dbxref=GenBank:WP_000166449.1;Name=WP_000166449.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=AD11_RS17135;product=arsenate reductase (glutaredoxin);protein_id=WP_000166449.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 576570 577271 . - . ID=gene-AD11_RS17140;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AD11_RS17140;old_locus_tag=AD11_2817 NZ_JJLL01000134.1 Protein Homology CDS 576570 577271 . - 0 ID=cds-WP_001307333.1;Parent=gene-AD11_RS17140;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AD11_RS17140;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 577366 578655 . - . ID=gene-AD11_RS17145;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AD11_RS17145;old_locus_tag=AD11_2818 NZ_JJLL01000134.1 Protein Homology CDS 577366 578655 . - 0 ID=cds-WP_000198328.1;Parent=gene-AD11_RS17145;Dbxref=GenBank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AD11_RS17145;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 578741 579367 . - . ID=gene-AD11_RS17150;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AD11_RS17150;old_locus_tag=AD11_2819 NZ_JJLL01000134.1 Protein Homology CDS 578741 579367 . - 0 ID=cds-WP_001295473.1;Parent=gene-AD11_RS17150;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AD11_RS17150;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 579692 580729 . + . ID=gene-AD11_RS17155;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AD11_RS17155;old_locus_tag=AD11_2821 NZ_JJLL01000134.1 Protein Homology CDS 579692 580729 . + 0 ID=cds-WP_001336050.1;Parent=gene-AD11_RS17155;Dbxref=GenBank:WP_001336050.1;Name=WP_001336050.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416994.1;locus_tag=AD11_RS17155;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001336050.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 580729 581367 . + . ID=gene-AD11_RS17160;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AD11_RS17160;old_locus_tag=AD11_2822 NZ_JJLL01000134.1 Protein Homology CDS 580729 581367 . + 0 ID=cds-WP_001028614.1;Parent=gene-AD11_RS17160;Dbxref=GenBank:WP_001028614.1;Name=WP_001028614.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708338.1;locus_tag=AD11_RS17160;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028614.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 581538 583604 . + . ID=gene-AD11_RS17165;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AD11_RS17165;old_locus_tag=AD11_2823 NZ_JJLL01000134.1 Protein Homology CDS 581538 583604 . + 0 ID=cds-WP_000529576.1;Parent=gene-AD11_RS17165;Dbxref=GenBank:WP_000529576.1;Name=WP_000529576.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AD11_RS17165;product=polyphosphate kinase 1;protein_id=WP_000529576.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 583609 585150 . + . ID=gene-AD11_RS17170;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AD11_RS17170;old_locus_tag=AD11_2824 NZ_JJLL01000134.1 Protein Homology CDS 583609 585150 . + 0 ID=cds-WP_001121363.1;Parent=gene-AD11_RS17170;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AD11_RS17170;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 585189 587432 . - . ID=gene-AD11_RS17175;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AD11_RS17175;old_locus_tag=AD11_2825 NZ_JJLL01000134.1 Protein Homology CDS 585189 587432 . - 0 ID=cds-WP_033865670.1;Parent=gene-AD11_RS17175;Dbxref=GenBank:WP_033865670.1;Name=WP_033865670.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=AD11_RS17175;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_033865670.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 587614 587766 . - . ID=gene-AD11_RS32105;Name=AD11_RS32105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32105;old_locus_tag=AD11_2826 NZ_JJLL01000134.1 Protein Homology CDS 587614 587766 . - 0 ID=cds-WP_000017552.1;Parent=gene-AD11_RS32105;Dbxref=GenBank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AD11_RS32105;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 587784 587975 . + . ID=gene-AD11_RS17185;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=AD11_RS17185;old_locus_tag=AD11_2827 NZ_JJLL01000134.1 Protein Homology CDS 587784 587975 . + 0 ID=cds-WP_000076001.1;Parent=gene-AD11_RS17185;Dbxref=GenBank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AD11_RS17185;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 588288 588806 . + . ID=gene-AD11_RS17190;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=AD11_RS17190;old_locus_tag=AD11_2828 NZ_JJLL01000134.1 Protein Homology CDS 588288 588806 . + 0 ID=cds-WP_001295476.1;Parent=gene-AD11_RS17190;Dbxref=GenBank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AD11_RS17190;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11 NZ_JJLL01000134.1 RefSeq pseudogene 588822 589361 . + . ID=gene-AD11_RS17195;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=pseudogene;locus_tag=AD11_RS17195;pseudo=true NZ_JJLL01000134.1 Protein Homology CDS 588822 589361 . + 0 ID=cds-AD11_RS17195;Parent=gene-AD11_RS17195;Note=internal stop;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AD11_RS17195;product=DUF5384 family protein;pseudo=true;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 589454 591031 . - . ID=gene-AD11_RS17200;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AD11_RS17200;old_locus_tag=AD11_2830 NZ_JJLL01000134.1 Protein Homology CDS 589454 591031 . - 0 ID=cds-WP_000138270.1;Parent=gene-AD11_RS17200;Dbxref=GenBank:WP_000138270.1;Name=WP_000138270.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AD11_RS17200;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138270.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 591100 592566 . - . ID=gene-AD11_RS17205;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AD11_RS17205;old_locus_tag=AD11_2831 NZ_JJLL01000134.1 Protein Homology CDS 591100 592566 . - 0 ID=cds-WP_001299507.1;Parent=gene-AD11_RS17205;Dbxref=GenBank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AD11_RS17205;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 592728 594098 . + . ID=gene-AD11_RS17210;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AD11_RS17210;old_locus_tag=AD11_2833 NZ_JJLL01000134.1 Protein Homology CDS 592728 594098 . + 0 ID=cds-WP_000937912.1;Parent=gene-AD11_RS17210;Dbxref=GenBank:WP_000937912.1;Name=WP_000937912.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AD11_RS17210;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000937912.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 594095 594310 . - . ID=gene-AD11_RS17215;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=AD11_RS17215;old_locus_tag=AD11_2834 NZ_JJLL01000134.1 Protein Homology CDS 594095 594310 . - 0 ID=cds-WP_001295478.1;Parent=gene-AD11_RS17215;Dbxref=GenBank:WP_001295478.1;Name=WP_001295478.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417005.2;locus_tag=AD11_RS17215;product=zinc ribbon domain-containing protein;protein_id=WP_001295478.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 594380 595852 . - . ID=gene-AD11_RS17220;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AD11_RS17220;old_locus_tag=AD11_2835 NZ_JJLL01000134.1 Protein Homology CDS 594380 595852 . - 0 ID=cds-WP_000249410.1;Parent=gene-AD11_RS17220;Dbxref=GenBank:WP_000249410.1;Name=WP_000249410.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AD11_RS17220;product=ribosome biogenesis GTPase Der;protein_id=WP_000249410.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 595970 597148 . - . ID=gene-AD11_RS17225;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AD11_RS17225;old_locus_tag=AD11_2836 NZ_JJLL01000134.1 Protein Homology CDS 595970 597148 . - 0 ID=cds-WP_001177048.1;Parent=gene-AD11_RS17225;Dbxref=GenBank:WP_001177048.1;Name=WP_001177048.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=AD11_RS17225;product=outer membrane protein assembly factor BamB;protein_id=WP_001177048.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 597159 597779 . - . ID=gene-AD11_RS17230;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AD11_RS17230;old_locus_tag=AD11_2837 NZ_JJLL01000134.1 Protein Homology CDS 597159 597779 . - 0 ID=cds-WP_000409205.1;Parent=gene-AD11_RS17230;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AD11_RS17230;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 597797 599071 . - . ID=gene-AD11_RS17235;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AD11_RS17235;old_locus_tag=AD11_2838 NZ_JJLL01000134.1 Protein Homology CDS 597797 599071 . - 0 ID=cds-WP_033865671.1;Parent=gene-AD11_RS17235;Dbxref=GenBank:WP_033865671.1;Name=WP_033865671.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AD11_RS17235;product=histidine--tRNA ligase;protein_id=WP_033865671.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 599182 600300 . - . ID=gene-AD11_RS17240;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AD11_RS17240;old_locus_tag=AD11_2839 NZ_JJLL01000134.1 Protein Homology CDS 599182 600300 . - 0 ID=cds-WP_000551807.1;Parent=gene-AD11_RS17240;Dbxref=GenBank:WP_000551807.1;Name=WP_000551807.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AD11_RS17240;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 600327 601340 . - . ID=gene-AD11_RS17245;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AD11_RS17245;old_locus_tag=AD11_2840 NZ_JJLL01000134.1 Protein Homology CDS 600327 601340 . - 0 ID=cds-WP_001090844.1;Parent=gene-AD11_RS17245;Dbxref=GenBank:WP_001090844.1;Name=WP_001090844.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AD11_RS17245;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 601625 602779 . - . ID=gene-AD11_RS17250;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AD11_RS17250;old_locus_tag=AD11_2841 NZ_JJLL01000134.1 Protein Homology CDS 601625 602779 . - 0 ID=cds-WP_000003317.1;Parent=gene-AD11_RS17250;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AD11_RS17250;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 602929 603360 . - . ID=gene-AD11_RS17255;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AD11_RS17255;old_locus_tag=AD11_2842 NZ_JJLL01000134.1 Protein Homology CDS 602929 603360 . - 0 ID=cds-WP_000963837.1;Parent=gene-AD11_RS17255;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AD11_RS17255;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 603510 605822 . - . ID=gene-AD11_RS17260;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AD11_RS17260;old_locus_tag=AD11_2843 NZ_JJLL01000134.1 Protein Homology CDS 603510 605822 . - 0 ID=cds-WP_001137675.1;Parent=gene-AD11_RS17260;Dbxref=GenBank:WP_001137675.1;Name=WP_001137675.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AD11_RS17260;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_001137675.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 605823 610784 . - . ID=gene-AD11_RS17265;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AD11_RS17265;old_locus_tag=AD11_2844 NZ_JJLL01000134.1 Protein Homology CDS 605823 610784 . - 0 ID=cds-WP_033865672.1;Parent=gene-AD11_RS17265;Dbxref=GenBank:WP_033865672.1;Name=WP_033865672.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417015.1;locus_tag=AD11_RS17265;product=alpha2-macroglobulin;protein_id=WP_033865672.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 610991 611836 . + . ID=gene-AD11_RS17270;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AD11_RS17270;old_locus_tag=AD11_2845 NZ_JJLL01000134.1 Protein Homology CDS 610991 611836 . + 0 ID=cds-WP_000108626.1;Parent=gene-AD11_RS17270;Dbxref=GenBank:WP_000108626.1;Name=WP_000108626.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AD11_RS17270;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 612498 612623 . + . ID=gene-AD11_RS32675;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AD11_RS32675;old_locus_tag=AD11_2847 NZ_JJLL01000134.1 Protein Homology CDS 612498 612623 . + 0 ID=cds-WP_001380605.1;Parent=gene-AD11_RS32675;Dbxref=GenBank:WP_001380605.1;Name=WP_001380605.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AD11_RS32675;product=small toxic inner membrane protein TimP;protein_id=WP_001380605.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 612653 613429 . - . ID=gene-AD11_RS17275;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AD11_RS17275;old_locus_tag=AD11_2848 NZ_JJLL01000134.1 Protein Homology CDS 612653 613429 . - 0 ID=cds-WP_001295479.1;Parent=gene-AD11_RS17275;Dbxref=GenBank:WP_001295479.1;Name=WP_001295479.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AD11_RS17275;product=enhanced serine sensitivity protein SseB;protein_id=WP_001295479.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 613571 614854 . - . ID=gene-AD11_RS17280;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AD11_RS17280;old_locus_tag=AD11_2849 NZ_JJLL01000134.1 Protein Homology CDS 613571 614854 . - 0 ID=cds-WP_000133580.1;Parent=gene-AD11_RS17280;Dbxref=GenBank:WP_000133580.1;Name=WP_000133580.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417018.4;locus_tag=AD11_RS17280;product=aminopeptidase PepB;protein_id=WP_000133580.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 615032 615232 . - . ID=gene-AD11_RS17285;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AD11_RS17285;old_locus_tag=AD11_2850 NZ_JJLL01000134.1 Protein Homology CDS 615032 615232 . - 0 ID=cds-WP_000523616.1;Parent=gene-AD11_RS17285;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AD11_RS17285;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 615244 615579 . - . ID=gene-AD11_RS17290;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AD11_RS17290;old_locus_tag=AD11_2851 NZ_JJLL01000134.1 Protein Homology CDS 615244 615579 . - 0 ID=cds-WP_001124469.1;Parent=gene-AD11_RS17290;Dbxref=GenBank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AD11_RS17290;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 615581 617431 . - . ID=gene-AD11_RS17295;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AD11_RS17295;old_locus_tag=AD11_2852 NZ_JJLL01000134.1 Protein Homology CDS 615581 617431 . - 0 ID=cds-WP_001196613.1;Parent=gene-AD11_RS17295;Dbxref=GenBank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AD11_RS17295;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 617448 617963 . - . ID=gene-AD11_RS17300;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AD11_RS17300;old_locus_tag=AD11_2853 NZ_JJLL01000134.1 Protein Homology CDS 617448 617963 . - 0 ID=cds-WP_000384413.1;Parent=gene-AD11_RS17300;Dbxref=GenBank:WP_000384413.1;Name=WP_000384413.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AD11_RS17300;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 618059 618382 . - . ID=gene-AD11_RS17305;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AD11_RS17305;old_locus_tag=AD11_2855 NZ_JJLL01000134.1 Protein Homology CDS 618059 618382 . - 0 ID=cds-WP_000028953.1;Parent=gene-AD11_RS17305;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AD11_RS17305;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 618399 618785 . - . ID=gene-AD11_RS17310;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AD11_RS17310;old_locus_tag=AD11_2856 NZ_JJLL01000134.1 Protein Homology CDS 618399 618785 . - 0 ID=cds-WP_000331707.1;Parent=gene-AD11_RS17310;Dbxref=GenBank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AD11_RS17310;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 618813 620027 . - . ID=gene-AD11_RS17315;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AD11_RS17315;old_locus_tag=AD11_2857 NZ_JJLL01000134.1 Protein Homology CDS 618813 620027 . - 0 ID=cds-WP_001295373.1;Parent=gene-AD11_RS17315;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AD11_RS17315;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 620139 620627 . - . ID=gene-AD11_RS17320;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AD11_RS17320;old_locus_tag=AD11_2858 NZ_JJLL01000134.1 Protein Homology CDS 620139 620627 . - 0 ID=cds-WP_001241357.1;Parent=gene-AD11_RS17320;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AD11_RS17320;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 621261 622001 . - . ID=gene-AD11_RS17325;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AD11_RS17325;old_locus_tag=AD11_2859 NZ_JJLL01000134.1 Protein Homology CDS 621261 622001 . - 0 ID=cds-WP_000940019.1;Parent=gene-AD11_RS17325;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AD11_RS17325;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 622120 622923 . + . ID=gene-AD11_RS17330;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AD11_RS17330;old_locus_tag=AD11_2860 NZ_JJLL01000134.1 Protein Homology CDS 622120 622923 . + 0 ID=cds-WP_000553451.1;Parent=gene-AD11_RS17330;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AD11_RS17330;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 623068 623922 . + . ID=gene-AD11_RS17335;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=AD11_RS17335;old_locus_tag=AD11_2861 NZ_JJLL01000134.1 Protein Homology CDS 623068 623922 . + 0 ID=cds-WP_001297705.1;Parent=gene-AD11_RS17335;Dbxref=GenBank:WP_001297705.1;Name=WP_001297705.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417029.4;locus_tag=AD11_RS17335;product=alpha/beta hydrolase;protein_id=WP_001297705.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 624113 625393 . + . ID=gene-AD11_RS17340;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AD11_RS17340;old_locus_tag=AD11_2862 NZ_JJLL01000134.1 Protein Homology CDS 624113 625393 . + 0 ID=cds-WP_000982994.1;Parent=gene-AD11_RS17340;Dbxref=GenBank:WP_000982994.1;Name=WP_000982994.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AD11_RS17340;product=stationary phase inducible protein CsiE;protein_id=WP_000982994.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 625385 626524 . - . ID=gene-AD11_RS17345;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AD11_RS17345;old_locus_tag=AD11_2863 NZ_JJLL01000134.1 Protein Homology CDS 625385 626524 . - 0 ID=cds-WP_000244193.1;Parent=gene-AD11_RS17345;Dbxref=GenBank:WP_000244193.1;Name=WP_000244193.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AD11_RS17345;product=3-phenylpropionate MFS transporter;protein_id=WP_000244193.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 626684 627574 . - . ID=gene-AD11_RS17350;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AD11_RS17350;old_locus_tag=AD11_2864 NZ_JJLL01000134.1 Protein Homology CDS 626684 627574 . - 0 ID=cds-WP_000423261.1;Parent=gene-AD11_RS17350;Dbxref=GenBank:WP_000423261.1;Name=WP_000423261.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417032.1;locus_tag=AD11_RS17350;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423261.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 627710 629071 . + . ID=gene-AD11_RS17355;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AD11_RS17355;old_locus_tag=AD11_2865 NZ_JJLL01000134.1 Protein Homology CDS 627710 629071 . + 0 ID=cds-WP_000211172.1;Parent=gene-AD11_RS17355;Dbxref=GenBank:WP_000211172.1;Name=WP_000211172.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AD11_RS17355;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 629068 629586 . + . ID=gene-AD11_RS17360;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AD11_RS17360;old_locus_tag=AD11_2866 NZ_JJLL01000134.1 Protein Homology CDS 629068 629586 . + 0 ID=cds-WP_001276072.1;Parent=gene-AD11_RS17360;Dbxref=GenBank:WP_001276072.1;Name=WP_001276072.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AD11_RS17360;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 629586 629906 . + . ID=gene-AD11_RS17365;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AD11_RS17365;old_locus_tag=AD11_2867 NZ_JJLL01000134.1 Protein Homology CDS 629586 629906 . + 0 ID=cds-WP_001080102.1;Parent=gene-AD11_RS17365;Dbxref=GenBank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AD11_RS17365;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 629903 630715 . + . ID=gene-AD11_RS17370;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AD11_RS17370;old_locus_tag=AD11_2868 NZ_JJLL01000134.1 Protein Homology CDS 629903 630715 . + 0 ID=cds-WP_001281379.1;Parent=gene-AD11_RS17370;Dbxref=GenBank:WP_001281379.1;Name=WP_001281379.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417036.1;locus_tag=AD11_RS17370;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281379.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 630725 631927 . + . ID=gene-AD11_RS17375;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AD11_RS17375;old_locus_tag=AD11_2869 NZ_JJLL01000134.1 Protein Homology CDS 630725 631927 . + 0 ID=cds-WP_000660788.1;Parent=gene-AD11_RS17375;Dbxref=GenBank:WP_000660788.1;Name=WP_000660788.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AD11_RS17375;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_000660788.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 632024 632446 . + . ID=gene-AD11_RS17380;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AD11_RS17380;old_locus_tag=AD11_2870 NZ_JJLL01000134.1 Protein Homology CDS 632024 632446 . + 0 ID=cds-WP_001094726.1;Parent=gene-AD11_RS17380;Dbxref=GenBank:WP_001094726.1;Name=WP_001094726.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AD11_RS17380;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 632494 633366 . - . ID=gene-AD11_RS17385;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=AD11_RS17385;old_locus_tag=AD11_2871 NZ_JJLL01000134.1 Protein Homology CDS 632494 633366 . - 0 ID=cds-WP_033865673.1;Parent=gene-AD11_RS17385;Dbxref=GenBank:WP_033865673.1;Name=WP_033865673.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AD11_RS17385;product=aldose 1-epimerase;protein_id=WP_033865673.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 633378 634472 . - . ID=gene-AD11_RS17390;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AD11_RS17390;old_locus_tag=AD11_2872 NZ_JJLL01000134.1 Protein Homology CDS 633378 634472 . - 0 ID=cds-WP_000700787.1;Parent=gene-AD11_RS17390;Dbxref=GenBank:WP_000700787.1;Name=WP_000700787.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AD11_RS17390;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700787.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 634505 635503 . - . ID=gene-AD11_RS17395;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AD11_RS17395;old_locus_tag=AD11_2873 NZ_JJLL01000134.1 Protein Homology CDS 634505 635503 . - 0 ID=cds-WP_001276670.1;Parent=gene-AD11_RS17395;Dbxref=GenBank:WP_001276670.1;Name=WP_001276670.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=AD11_RS17395;product=ABC transporter permease;protein_id=WP_001276670.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 635528 637039 . - . ID=gene-AD11_RS17400;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=AD11_RS17400;old_locus_tag=AD11_2874 NZ_JJLL01000134.1 Protein Homology CDS 635528 637039 . - 0 ID=cds-WP_001556163.1;Parent=gene-AD11_RS17400;Dbxref=GenBank:WP_001556163.1;Name=WP_001556163.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yphE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417042.1;locus_tag=AD11_RS17400;product=sugar ABC transporter ATP-binding protein;protein_id=WP_001556163.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 637062 638045 . - . ID=gene-AD11_RS17405;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=AD11_RS17405;old_locus_tag=AD11_2875 NZ_JJLL01000134.1 Protein Homology CDS 637062 638045 . - 0 ID=cds-WP_001556164.1;Parent=gene-AD11_RS17405;Dbxref=GenBank:WP_001556164.1;Name=WP_001556164.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311441.1;locus_tag=AD11_RS17405;product=substrate-binding domain-containing protein;protein_id=WP_001556164.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 638142 641423 . - . ID=gene-AD11_RS17410;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=AD11_RS17410;old_locus_tag=AD11_2876 NZ_JJLL01000134.1 Protein Homology CDS 638142 641423 . - 0 ID=cds-WP_032083904.1;Parent=gene-AD11_RS17410;Dbxref=GenBank:WP_032083904.1;Name=WP_032083904.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AD11_RS17410;product=DUF5107 domain-containing protein;protein_id=WP_032083904.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 641541 642734 . + . ID=gene-AD11_RS17415;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AD11_RS17415;old_locus_tag=AD11_2877 NZ_JJLL01000134.1 Protein Homology CDS 641541 642734 . + 0 ID=cds-WP_001556166.1;Parent=gene-AD11_RS17415;Dbxref=GenBank:WP_001556166.1;Name=WP_001556166.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311443.2;locus_tag=AD11_RS17415;product=ROK family protein;protein_id=WP_001556166.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 642932 644185 . - . ID=gene-AD11_RS17420;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AD11_RS17420;old_locus_tag=AD11_2878 NZ_JJLL01000134.1 Protein Homology CDS 642932 644185 . - 0 ID=cds-WP_000919159.1;Parent=gene-AD11_RS17420;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AD11_RS17420;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 644513 645703 . + . ID=gene-AD11_RS17425;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AD11_RS17425;old_locus_tag=AD11_2880 NZ_JJLL01000134.1 Protein Homology CDS 644513 645703 . + 0 ID=cds-WP_000883122.1;Parent=gene-AD11_RS17425;Dbxref=GenBank:WP_000883122.1;Name=WP_000883122.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AD11_RS17425;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 645748 646086 . - . ID=gene-AD11_RS17430;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AD11_RS17430;old_locus_tag=AD11_2881 NZ_JJLL01000134.1 Protein Homology CDS 645748 646086 . - 0 ID=cds-WP_000717691.1;Parent=gene-AD11_RS17430;Dbxref=GenBank:WP_000717691.1;Name=WP_000717691.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AD11_RS17430;product=nitrogen regulatory protein P-II;protein_id=WP_000717691.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 646147 647481 . - . ID=gene-AD11_RS17435;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AD11_RS17435;old_locus_tag=AD11_2882 NZ_JJLL01000134.1 Protein Homology CDS 646147 647481 . - 0 ID=cds-WP_001295369.1;Parent=gene-AD11_RS17435;Dbxref=GenBank:WP_001295369.1;Name=WP_001295369.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AD11_RS17435;product=two-component system response regulator GlrR;protein_id=WP_001295369.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 647471 648184 . - . ID=gene-AD11_RS17440;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AD11_RS17440;old_locus_tag=AD11_2883 NZ_JJLL01000134.1 Protein Homology CDS 647471 648184 . - 0 ID=cds-WP_001215861.1;Parent=gene-AD11_RS17440;Dbxref=GenBank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AD11_RS17440;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215861.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 648349 649776 . - . ID=gene-AD11_RS17445;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AD11_RS17445;old_locus_tag=AD11_2884 NZ_JJLL01000134.1 Protein Homology CDS 648349 649776 . - 0 ID=cds-WP_024187693.1;Parent=gene-AD11_RS17445;Dbxref=GenBank:WP_024187693.1;Name=WP_024187693.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AD11_RS17445;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_024187693.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 650334 654221 . - . ID=gene-AD11_RS17450;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AD11_RS17450;old_locus_tag=AD11_2885 NZ_JJLL01000134.1 Protein Homology CDS 650334 654221 . - 0 ID=cds-WP_000970095.1;Parent=gene-AD11_RS17450;Dbxref=GenBank:WP_000970095.1;Name=WP_000970095.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311450.1;locus_tag=AD11_RS17450;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970095.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 654479 656035 . + . ID=gene-AD11_RS17455;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AD11_RS17455;old_locus_tag=AD11_2886 NZ_JJLL01000134.1 Protein Homology CDS 654479 656035 . + 0 ID=cds-WP_000734212.1;Parent=gene-AD11_RS17455;Dbxref=GenBank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AD11_RS17455;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 656032 656535 . - . ID=gene-AD11_RS17460;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AD11_RS17460;old_locus_tag=AD11_2887 NZ_JJLL01000134.1 Protein Homology CDS 656032 656535 . - 0 ID=cds-WP_001297409.1;Parent=gene-AD11_RS17460;Dbxref=GenBank:WP_001297409.1;Name=WP_001297409.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417054.2;locus_tag=AD11_RS17460;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001297409.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 656593 657228 . - . ID=gene-AD11_RS17465;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AD11_RS17465;old_locus_tag=AD11_2888 NZ_JJLL01000134.1 Protein Homology CDS 656593 657228 . - 0 ID=cds-WP_000190655.1;Parent=gene-AD11_RS17465;Dbxref=GenBank:WP_000190655.1;Name=WP_000190655.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AD11_RS17465;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 657437 658285 . + . ID=gene-AD11_RS17470;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AD11_RS17470;old_locus_tag=AD11_2889 NZ_JJLL01000134.1 Protein Homology CDS 657437 658285 . + 0 ID=cds-WP_001013779.1;Parent=gene-AD11_RS17470;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AD11_RS17470;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 658341 658601 . + . ID=gene-AD11_RS17475;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AD11_RS17475;old_locus_tag=AD11_2890 NZ_JJLL01000134.1 Protein Homology CDS 658341 658601 . + 0 ID=cds-WP_001196283.1;Parent=gene-AD11_RS17475;Dbxref=GenBank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AD11_RS17475;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 658795 658875 . - . ID=gene-AD11_RS17480;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AD11_RS17480 NZ_JJLL01000134.1 Protein Homology CDS 658795 658875 . - 0 ID=cds-WP_000128776.1;Parent=gene-AD11_RS17480;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AD11_RS17480;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 659296 659676 . - . ID=gene-AD11_RS17495;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AD11_RS17495;old_locus_tag=AD11_2891 NZ_JJLL01000134.1 Protein Homology CDS 659296 659676 . - 0 ID=cds-WP_000986023.1;Parent=gene-AD11_RS17495;Dbxref=GenBank:WP_000986023.1;Name=WP_000986023.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AD11_RS17495;product=holo-ACP synthase;protein_id=WP_000986023.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 659676 660407 . - . ID=gene-AD11_RS17500;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AD11_RS17500;old_locus_tag=AD11_2892 NZ_JJLL01000134.1 Protein Homology CDS 659676 660407 . - 0 ID=cds-WP_032083856.1;Parent=gene-AD11_RS17500;Dbxref=GenBank:WP_032083856.1;Name=WP_032083856.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AD11_RS17500;product=pyridoxine 5'-phosphate synthase;protein_id=WP_032083856.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 660419 661147 . - . ID=gene-AD11_RS17505;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AD11_RS17505;old_locus_tag=AD11_2893 NZ_JJLL01000134.1 Protein Homology CDS 660419 661147 . - 0 ID=cds-WP_000399404.1;Parent=gene-AD11_RS17505;Dbxref=GenBank:WP_000399404.1;Name=WP_000399404.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AD11_RS17505;product=DNA repair protein RecO;protein_id=WP_000399404.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 661159 662064 . - . ID=gene-AD11_RS17510;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AD11_RS17510;old_locus_tag=AD11_2894 NZ_JJLL01000134.1 Protein Homology CDS 661159 662064 . - 0 ID=cds-WP_000020749.1;Parent=gene-AD11_RS17510;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AD11_RS17510;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 662061 662741 . - . ID=gene-AD11_RS17515;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AD11_RS17515;old_locus_tag=AD11_2895 NZ_JJLL01000134.1 Protein Homology CDS 662061 662741 . - 0 ID=cds-WP_001068343.1;Parent=gene-AD11_RS17515;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AD11_RS17515;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 663013 663987 . - . ID=gene-AD11_RS17520;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AD11_RS17520;old_locus_tag=AD11_2896 NZ_JJLL01000134.1 Protein Homology CDS 663013 663987 . - 0 ID=cds-WP_000002541.1;Parent=gene-AD11_RS17520;Dbxref=GenBank:WP_000002541.1;Name=WP_000002541.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417063.1;locus_tag=AD11_RS17520;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 664003 665802 . - . ID=gene-AD11_RS17525;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AD11_RS17525;old_locus_tag=AD11_2897 NZ_JJLL01000134.1 Protein Homology CDS 664003 665802 . - 0 ID=cds-WP_000790168.1;Parent=gene-AD11_RS17525;Dbxref=GenBank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AD11_RS17525;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 666000 666479 . - . ID=gene-AD11_RS17530;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AD11_RS17530;old_locus_tag=AD11_2898 NZ_JJLL01000134.1 Protein Homology CDS 666000 666479 . - 0 ID=cds-WP_000589068.1;Parent=gene-AD11_RS17530;Dbxref=GenBank:WP_000589068.1;Name=WP_000589068.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AD11_RS17530;product=SoxR-reducing system protein RseC;protein_id=WP_000589068.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 666476 667432 . - . ID=gene-AD11_RS17535;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AD11_RS17535;old_locus_tag=AD11_2899 NZ_JJLL01000134.1 Protein Homology CDS 666476 667432 . - 0 ID=cds-WP_000812053.1;Parent=gene-AD11_RS17535;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AD11_RS17535;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 667432 668082 . - . ID=gene-AD11_RS17540;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AD11_RS17540;old_locus_tag=AD11_2900 NZ_JJLL01000134.1 Protein Homology CDS 667432 668082 . - 0 ID=cds-WP_001168459.1;Parent=gene-AD11_RS17540;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AD11_RS17540;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 668115 668690 . - . ID=gene-AD11_RS17545;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AD11_RS17545;old_locus_tag=AD11_2901 NZ_JJLL01000134.1 Protein Homology CDS 668115 668690 . - 0 ID=cds-WP_001295364.1;Parent=gene-AD11_RS17545;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AD11_RS17545;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 668687 668842 . - . ID=gene-AD11_RS31670;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AD11_RS31670 NZ_JJLL01000134.1 Protein Homology CDS 668687 668842 . - 0 ID=cds-WP_001303621.1;Parent=gene-AD11_RS31670;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AD11_RS31670;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 669098 670720 . + . ID=gene-AD11_RS17555;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AD11_RS17555;old_locus_tag=AD11_2902 NZ_JJLL01000134.1 Protein Homology CDS 669098 670720 . + 0 ID=cds-WP_032083855.1;Parent=gene-AD11_RS17555;Dbxref=GenBank:WP_032083855.1;Name=WP_032083855.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=AD11_RS17555;product=L-aspartate oxidase;protein_id=WP_032083855.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 670705 671442 . - . ID=gene-AD11_RS17560;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AD11_RS17560;old_locus_tag=AD11_2903 NZ_JJLL01000134.1 Protein Homology CDS 670705 671442 . - 0 ID=cds-WP_001295363.1;Parent=gene-AD11_RS17560;Dbxref=GenBank:WP_001295363.1;Name=WP_001295363.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AD11_RS17560;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_001295363.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 671574 672908 . + . ID=gene-AD11_RS17565;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AD11_RS17565;old_locus_tag=AD11_2904 NZ_JJLL01000134.1 Protein Homology CDS 671574 672908 . + 0 ID=cds-WP_033865674.1;Parent=gene-AD11_RS17565;Dbxref=GenBank:WP_033865674.1;Name=WP_033865674.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AD11_RS17565;product=ATP-dependent RNA helicase SrmB;protein_id=WP_033865674.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 673117 673998 . - . ID=gene-AD11_RS17575;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=AD11_RS17575;old_locus_tag=AD11_2905 NZ_JJLL01000134.1 Protein Homology CDS 673117 673998 . - 0 ID=cds-WP_001300638.1;Parent=gene-AD11_RS17575;Dbxref=GenBank:WP_001300638.1;Name=WP_001300638.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AD11_RS17575;product=LysR family transcriptional regulator;protein_id=WP_001300638.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 674101 674688 . + . ID=gene-AD11_RS17580;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AD11_RS17580;old_locus_tag=AD11_2906 NZ_JJLL01000134.1 Protein Homology CDS 674101 674688 . + 0 ID=cds-WP_000189207.1;Parent=gene-AD11_RS17580;Dbxref=GenBank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AD11_RS17580;product=cysteine/O-acetylserine transporter;protein_id=WP_000189207.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 674744 675127 . - . ID=gene-AD11_RS17585;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AD11_RS17585;old_locus_tag=AD11_2907 NZ_JJLL01000134.1 Protein Homology CDS 674744 675127 . - 0 ID=cds-WP_000627807.1;Parent=gene-AD11_RS17585;Dbxref=GenBank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AD11_RS17585;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 675432 676121 . + . ID=gene-AD11_RS17590;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AD11_RS17590;old_locus_tag=AD11_2908 NZ_JJLL01000134.1 Protein Homology CDS 675432 676121 . + 0 ID=cds-WP_001262716.1;Parent=gene-AD11_RS17590;Dbxref=GenBank:WP_001262716.1;Name=WP_001262716.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AD11_RS17590;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 676169 677206 . - . ID=gene-AD11_RS17595;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AD11_RS17595;old_locus_tag=AD11_2909 NZ_JJLL01000134.1 Protein Homology CDS 676169 677206 . - 0 ID=cds-WP_000997403.1;Parent=gene-AD11_RS17595;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AD11_RS17595;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 677413 677832 . + . ID=gene-AD11_RS17605;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AD11_RS17605;old_locus_tag=AD11_2910 NZ_JJLL01000134.1 Protein Homology CDS 677413 677832 . + 0 ID=cds-WP_001098726.1;Parent=gene-AD11_RS17605;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AD11_RS17605;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 677901 678599 . + . ID=gene-AD11_RS17610;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AD11_RS17610;old_locus_tag=AD11_2911 NZ_JJLL01000134.1 Protein Homology CDS 677901 678599 . + 0 ID=cds-WP_001300438.1;Parent=gene-AD11_RS17610;Dbxref=GenBank:WP_001300438.1;Name=WP_001300438.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417078.4;locus_tag=AD11_RS17610;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_001300438.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 678631 681291 . + . ID=gene-AD11_RS17615;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AD11_RS17615;old_locus_tag=AD11_2912 NZ_JJLL01000134.1 Protein Homology CDS 678631 681291 . + 0 ID=cds-WP_000083005.1;Parent=gene-AD11_RS17615;Dbxref=GenBank:WP_000083005.1;Name=WP_000083005.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AD11_RS17615;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000083005.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 681405 682760 . + . ID=gene-AD11_RS17620;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AD11_RS17620;old_locus_tag=AD11_2913 NZ_JJLL01000134.1 Protein Homology CDS 681405 682760 . + 0 ID=cds-WP_000949265.1;Parent=gene-AD11_RS17620;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AD11_RS17620;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 682806 683129 . + . ID=gene-AD11_RS17625;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AD11_RS17625;old_locus_tag=AD11_2914 NZ_JJLL01000134.1 Protein Homology CDS 682806 683129 . + 0 ID=cds-WP_064735377.1;Parent=gene-AD11_RS17625;Dbxref=GenBank:WP_064735377.1;Name=WP_064735377.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AD11_RS17625;product=YfiM family lipoprotein;protein_id=WP_064735377.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 683126 684424 . - . ID=gene-AD11_RS17630;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AD11_RS17630;old_locus_tag=AD11_2915 NZ_JJLL01000134.1 Protein Homology CDS 683126 684424 . - 0 ID=cds-WP_000841103.1-2;Parent=gene-AD11_RS17630;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AD11_RS17630;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JJLL01000134.1 RefSeq gene 684540 684733 . - . ID=gene-AD11_RS32230;Name=AD11_RS32230;end_range=684733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32230;partial=true NZ_JJLL01000134.1 Protein Homology CDS 684540 684733 . - 2 ID=cds-WP_033546398.1;Parent=gene-AD11_RS32230;Dbxref=GenBank:WP_033546398.1;Name=WP_033546398.1;end_range=684733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223975.1;locus_tag=AD11_RS32230;partial=true;product=hypothetical protein;protein_id=WP_033546398.1;transl_table=11 ##sequence-region NZ_JJLL01000135.1 1 11172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000135.1 RefSeq region 1 11172 . + . ID=NZ_JJLL01000135.1:1..11172;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000135.1 RefSeq gene 174 1286 . - . ID=gene-AD11_RS17645;Name=AD11_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17645;old_locus_tag=AD11_2916 NZ_JJLL01000135.1 Protein Homology CDS 174 1286 . - 0 ID=cds-WP_032180458.1;Parent=gene-AD11_RS17645;Dbxref=GenBank:WP_032180458.1;Name=WP_032180458.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS17645;product=IS4-like element IS421 family transposase;protein_id=WP_032180458.1;transl_table=11 NZ_JJLL01000135.1 RefSeq pseudogene 1525 4223 . + . ID=gene-AD11_RS32110;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=pseudogene;locus_tag=AD11_RS32110;pseudo=true NZ_JJLL01000135.1 Protein Homology CDS 1525 4223 . + 0 ID=cds-AD11_RS32110;Parent=gene-AD11_RS32110;Note=frameshifted%3B internal stop;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233973.1;locus_tag=AD11_RS32110;product=CRISPR-associated helicase Cas3';pseudo=true;transl_table=11 NZ_JJLL01000135.1 RefSeq gene 4321 5883 . + . ID=gene-AD11_RS17655;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=AD11_RS17655;old_locus_tag=AD11_2920 NZ_JJLL01000135.1 Protein Homology CDS 4321 5883 . + 0 ID=cds-WP_001084112.1;Parent=gene-AD11_RS17655;Dbxref=GenBank:WP_001084112.1;Name=WP_001084112.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311641.1;locus_tag=AD11_RS17655;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_001084112.1;transl_table=11 NZ_JJLL01000135.1 RefSeq gene 5880 6416 . + . ID=gene-AD11_RS17660;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=AD11_RS17660;old_locus_tag=AD11_2921 NZ_JJLL01000135.1 Protein Homology CDS 5880 6416 . + 0 ID=cds-WP_000029328.1;Parent=gene-AD11_RS17660;Dbxref=GenBank:WP_000029328.1;Name=WP_000029328.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311640.1;locus_tag=AD11_RS17660;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000029328.1;transl_table=11 NZ_JJLL01000135.1 RefSeq gene 6428 7483 . + . ID=gene-AD11_RS17665;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=AD11_RS17665;old_locus_tag=AD11_2922 NZ_JJLL01000135.1 Protein Homology CDS 6428 7483 . + 0 ID=cds-WP_000206450.1;Parent=gene-AD11_RS17665;Dbxref=GenBank:WP_000206450.1;Name=WP_000206450.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311639.1;locus_tag=AD11_RS17665;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_000206450.1;transl_table=11 NZ_JJLL01000135.1 RefSeq gene 7494 8240 . + . ID=gene-AD11_RS17670;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=AD11_RS17670;old_locus_tag=AD11_2923 NZ_JJLL01000135.1 Protein Homology CDS 7494 8240 . + 0 ID=cds-WP_000085073.1;Parent=gene-AD11_RS17670;Dbxref=GenBank:WP_000085073.1;Name=WP_000085073.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311638.1;locus_tag=AD11_RS17670;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085073.1;transl_table=11 NZ_JJLL01000135.1 RefSeq gene 8222 8872 . + . ID=gene-AD11_RS17675;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=AD11_RS17675;old_locus_tag=AD11_2924 NZ_JJLL01000135.1 Protein Homology CDS 8222 8872 . + 0 ID=cds-WP_000281461.1;Parent=gene-AD11_RS17675;Dbxref=GenBank:WP_000281461.1;Name=WP_000281461.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281458.1;locus_tag=AD11_RS17675;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281461.1;transl_table=11 NZ_JJLL01000135.1 RefSeq gene 8869 9792 . + . ID=gene-AD11_RS17680;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=AD11_RS17680;old_locus_tag=AD11_2925 NZ_JJLL01000135.1 Protein Homology CDS 8869 9792 . + 0 ID=cds-WP_000144854.1;Parent=gene-AD11_RS17680;Dbxref=GenBank:WP_000144854.1;Name=WP_000144854.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311636.1;locus_tag=AD11_RS17680;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144854.1;transl_table=11 NZ_JJLL01000135.1 RefSeq gene 9789 10082 . + . ID=gene-AD11_RS17685;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=AD11_RS17685;old_locus_tag=AD11_2926 NZ_JJLL01000135.1 Protein Homology CDS 9789 10082 . + 0 ID=cds-WP_000061856.1;Parent=gene-AD11_RS17685;Dbxref=GenBank:WP_000061856.1;Name=WP_000061856.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=AD11_RS17685;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_000061856.1;transl_table=11 NZ_JJLL01000135.1 RefSeq direct_repeat 10179 10878 . + . ID=id-NZ_JJLL01000135.1:10179..10878;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=10179..10207;rpt_unit_seq=gtgttccccgcgccagcggggataaaccg NZ_JJLL01000135.1 RefSeq pseudogene 10954 11172 . + . ID=gene-AD11_RS17690;Name=AD11_RS17690;end_range=11172,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS17690;old_locus_tag=AD11_2928;partial=true;pseudo=true NZ_JJLL01000135.1 Protein Homology CDS 10954 11172 . + 0 ID=cds-AD11_RS17690;Parent=gene-AD11_RS17690;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11172,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS17690;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000136.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000136.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000136.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000136.1 RefSeq gene 1 196 . + . ID=gene-AD11_RS17695;Name=AD11_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17695;old_locus_tag=AD11_2929;partial=true;start_range=.,1 NZ_JJLL01000136.1 Protein Homology CDS 1 196 . + 1 ID=cds-WP_032189767.1;Parent=gene-AD11_RS17695;Dbxref=GenBank:WP_032189767.1;Name=WP_032189767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AD11_RS17695;partial=true;product=YfeC-like transcriptional regulator;protein_id=WP_032189767.1;start_range=.,1;transl_table=11 NZ_JJLL01000136.1 RefSeq gene 248 1663 . - . ID=gene-AD11_RS17700;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AD11_RS17700;old_locus_tag=AD11_2930 NZ_JJLL01000136.1 Protein Homology CDS 248 1663 . - 0 ID=cds-WP_000695655.1-2;Parent=gene-AD11_RS17700;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AD11_RS17700;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JJLL01000136.1 RefSeq gene 1921 1996 . + . ID=gene-AD11_RS17705;Name=AD11_RS17705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS17705;old_locus_tag=AD11_2932 NZ_JJLL01000136.1 tRNAscan-SE tRNA 1921 1996 . + . ID=rna-AD11_RS17705;Parent=gene-AD11_RS17705;anticodon=(pos:1954..1956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17705;product=tRNA-Val NZ_JJLL01000136.1 tRNAscan-SE exon 1921 1996 . + . ID=exon-AD11_RS17705-1;Parent=rna-AD11_RS17705;anticodon=(pos:1954..1956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17705;product=tRNA-Val ##sequence-region NZ_JJLL01000137.1 1 499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000137.1 RefSeq region 1 499 . + . ID=NZ_JJLL01000137.1:1..499;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000137.1 RefSeq gene 94 169 . + . ID=gene-AD11_RS17710;Name=AD11_RS17710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS17710;old_locus_tag=AD11_2935 NZ_JJLL01000137.1 tRNAscan-SE tRNA 94 169 . + . ID=rna-AD11_RS17710;Parent=gene-AD11_RS17710;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17710;product=tRNA-Val NZ_JJLL01000137.1 tRNAscan-SE exon 94 169 . + . ID=exon-AD11_RS17710-1;Parent=rna-AD11_RS17710;anticodon=(pos:127..129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17710;product=tRNA-Val NZ_JJLL01000137.1 RefSeq gene 214 289 . + . ID=gene-AD11_RS17715;Name=AD11_RS17715;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS17715;old_locus_tag=AD11_2936 NZ_JJLL01000137.1 tRNAscan-SE tRNA 214 289 . + . ID=rna-AD11_RS17715;Parent=gene-AD11_RS17715;anticodon=(pos:247..249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17715;product=tRNA-Val NZ_JJLL01000137.1 tRNAscan-SE exon 214 289 . + . ID=exon-AD11_RS17715-1;Parent=rna-AD11_RS17715;anticodon=(pos:247..249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17715;product=tRNA-Val NZ_JJLL01000137.1 RefSeq gene 334 409 . + . ID=gene-AD11_RS17720;Name=AD11_RS17720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS17720;old_locus_tag=AD11_2937 NZ_JJLL01000137.1 tRNAscan-SE tRNA 334 409 . + . ID=rna-AD11_RS17720;Parent=gene-AD11_RS17720;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17720;product=tRNA-Val NZ_JJLL01000137.1 tRNAscan-SE exon 334 409 . + . ID=exon-AD11_RS17720-1;Parent=rna-AD11_RS17720;anticodon=(pos:367..369);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17720;product=tRNA-Val ##sequence-region NZ_JJLL01000138.1 1 10712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000138.1 RefSeq region 1 10712 . + . ID=NZ_JJLL01000138.1:1..10712;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000138.1 RefSeq gene 1 213 . - . ID=gene-AD11_RS29560;Name=AD11_RS29560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS29560;partial=true;start_range=.,1 NZ_JJLL01000138.1 Protein Homology CDS 1 213 . - 0 ID=cds-WP_024180207.1;Parent=gene-AD11_RS29560;Dbxref=GenBank:WP_024180207.1;Name=WP_024180207.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904653.1;locus_tag=AD11_RS29560;partial=true;product=transposase;protein_id=WP_024180207.1;start_range=.,1;transl_table=11 NZ_JJLL01000138.1 RefSeq gene 960 3161 . - . ID=gene-AD11_RS17730;Name=AD11_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17730;old_locus_tag=AD11_2938 NZ_JJLL01000138.1 Protein Homology CDS 960 3161 . - 0 ID=cds-WP_033865702.1;Parent=gene-AD11_RS17730;Dbxref=GenBank:WP_033865702.1;Name=WP_033865702.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774869.1;locus_tag=AD11_RS17730;product=AAA family ATPase;protein_id=WP_033865702.1;transl_table=11 NZ_JJLL01000138.1 RefSeq pseudogene 3508 3698 . + . ID=gene-AD11_RS30925;Name=AD11_RS30925;end_range=3698,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30925;partial=true;pseudo=true;start_range=.,3508 NZ_JJLL01000138.1 Protein Homology CDS 3508 3698 . + 0 ID=cds-AD11_RS30925;Parent=gene-AD11_RS30925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3698,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AD11_RS30925;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,3508;transl_table=11 NZ_JJLL01000138.1 RefSeq gene 3701 6151 . - . ID=gene-AD11_RS17735;Name=AD11_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17735;old_locus_tag=AD11_2939 NZ_JJLL01000138.1 Protein Homology CDS 3701 6151 . - 0 ID=cds-WP_001774868.1;Parent=gene-AD11_RS17735;Dbxref=GenBank:WP_001774868.1;Name=WP_001774868.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774868.1;locus_tag=AD11_RS17735;product=sigma factor-like helix-turn-helix DNA-binding protein;protein_id=WP_001774868.1;transl_table=11 NZ_JJLL01000138.1 RefSeq gene 6153 8381 . - . ID=gene-AD11_RS17740;Name=AD11_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17740;old_locus_tag=AD11_2940 NZ_JJLL01000138.1 Protein Homology CDS 6153 8381 . - 0 ID=cds-WP_001530084.1;Parent=gene-AD11_RS17740;Dbxref=GenBank:WP_001530084.1;Name=WP_001530084.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020628750.1;locus_tag=AD11_RS17740;product=DEAD/DEAH box helicase family protein;protein_id=WP_001530084.1;transl_table=11 NZ_JJLL01000138.1 RefSeq pseudogene 9084 10073 . + . ID=gene-AD11_RS17745;Name=AD11_RS17745;end_range=10073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS17745;old_locus_tag=AD11_2942;partial=true;pseudo=true NZ_JJLL01000138.1 Protein Homology CDS 9084 10073 . + 0 ID=cds-AD11_RS17745;Parent=gene-AD11_RS17745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001388361.1;locus_tag=AD11_RS17745;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_JJLL01000138.1 RefSeq pseudogene 10130 10712 . + . ID=gene-AD11_RS17750;Name=AD11_RS17750;end_range=10712,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS17750;old_locus_tag=AD11_2943;partial=true;pseudo=true NZ_JJLL01000138.1 Protein Homology CDS 10130 10712 . + 0 ID=cds-AD11_RS17750;Parent=gene-AD11_RS17750;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=10712,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS17750;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000139.1 1 3342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000139.1 RefSeq region 1 3342 . + . ID=NZ_JJLL01000139.1:1..3342;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000139.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS17755;Name=AD11_RS17755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS17755;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000139.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS17755;Parent=gene-AD11_RS17755;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS17755;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000139.1 RefSeq gene 710 1543 . - . ID=gene-AD11_RS17760;Name=AD11_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17760;old_locus_tag=AD11_2946 NZ_JJLL01000139.1 Protein Homology CDS 710 1543 . - 0 ID=cds-WP_050436503.1;Parent=gene-AD11_RS17760;Dbxref=GenBank:WP_050436503.1;Name=WP_050436503.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=AD11_RS17760;product=helix-turn-helix domain-containing protein;protein_id=WP_050436503.1;transl_table=11 NZ_JJLL01000139.1 RefSeq pseudogene 1950 2757 . - . ID=gene-AD11_RS17765;Name=tnpC;end_range=2757,.;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AD11_RS17765;partial=true;pseudo=true;start_range=.,1950 NZ_JJLL01000139.1 Protein Homology CDS 1950 2757 . - 0 ID=cds-AD11_RS17765;Parent=gene-AD11_RS17765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=2757,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AD11_RS17765;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1950;transl_table=11 NZ_JJLL01000139.1 RefSeq pseudogene 2768 2863 . + . ID=gene-AD11_RS30940;Name=AD11_RS30940;end_range=2863,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30940;partial=true;pseudo=true NZ_JJLL01000139.1 Protein Homology CDS 2768 2863 . + 0 ID=cds-AD11_RS30940;Parent=gene-AD11_RS30940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526115.1;locus_tag=AD11_RS30940;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000139.1 RefSeq gene 2902 3342 . - . ID=gene-AD11_RS17770;Name=AD11_RS17770;end_range=3342,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17770;old_locus_tag=AD11_2949;partial=true NZ_JJLL01000139.1 Protein Homology CDS 2902 3342 . - 0 ID=cds-WP_148725002.1;Parent=gene-AD11_RS17770;Dbxref=GenBank:WP_148725002.1;Name=WP_148725002.1;end_range=3342,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AD11_RS17770;partial=true;product=IS66 family transposase;protein_id=WP_148725002.1;transl_table=11 ##sequence-region NZ_JJLL01000140.1 1 1733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000140.1 RefSeq region 1 1733 . + . ID=NZ_JJLL01000140.1:1..1733;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000140.1 RefSeq gene 1 1733 . + . ID=gene-AD11_RS17775;Name=AD11_RS17775;end_range=1733,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS17775;partial=true;start_range=.,1 NZ_JJLL01000140.1 cmsearch rRNA 1 1733 . + . ID=rna-AD11_RS17775;Parent=gene-AD11_RS17775;Dbxref=RFAM:RF02541;end_range=1733,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17775;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000140.1 cmsearch exon 1 1733 . + . ID=exon-AD11_RS17775-1;Parent=rna-AD11_RS17775;Dbxref=RFAM:RF02541;end_range=1733,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17775;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJLL01000141.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000141.1 RefSeq region 1 933 . + . ID=NZ_JJLL01000141.1:1..933;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000141.1 RefSeq gene 1 159 . - . ID=gene-AD11_RS17780;Name=AD11_RS17780;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS17780;partial=true;start_range=.,1 NZ_JJLL01000141.1 cmsearch rRNA 1 159 . - . ID=rna-AD11_RS17780;Parent=gene-AD11_RS17780;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17780;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000141.1 cmsearch exon 1 159 . - . ID=exon-AD11_RS17780-1;Parent=rna-AD11_RS17780;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17780;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000141.1 RefSeq gene 353 428 . - . ID=gene-AD11_RS17785;Name=AD11_RS17785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS17785;old_locus_tag=AD11_2951 NZ_JJLL01000141.1 tRNAscan-SE tRNA 353 428 . - . ID=rna-AD11_RS17785;Parent=gene-AD11_RS17785;anticodon=(pos:complement(392..394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17785;product=tRNA-Glu NZ_JJLL01000141.1 tRNAscan-SE exon 353 428 . - . ID=exon-AD11_RS17785-1;Parent=rna-AD11_RS17785;anticodon=(pos:complement(392..394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17785;product=tRNA-Glu NZ_JJLL01000141.1 RefSeq gene 600 933 . - . ID=gene-AD11_RS17790;Name=AD11_RS17790;end_range=933,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS17790;old_locus_tag=AD11_2952;partial=true NZ_JJLL01000141.1 cmsearch rRNA 600 933 . - . ID=rna-AD11_RS17790;Parent=gene-AD11_RS17790;Dbxref=RFAM:RF00177;end_range=933,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17790;partial=true;product=16S ribosomal RNA NZ_JJLL01000141.1 cmsearch exon 600 933 . - . ID=exon-AD11_RS17790-1;Parent=rna-AD11_RS17790;Dbxref=RFAM:RF00177;end_range=933,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17790;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLL01000142.1 1 2550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000142.1 RefSeq region 1 2550 . + . ID=NZ_JJLL01000142.1:1..2550;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000142.1 RefSeq gene 1 972 . - . ID=gene-AD11_RS17795;Name=AD11_RS17795;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS17795;partial=true;start_range=.,1 NZ_JJLL01000142.1 cmsearch rRNA 1 972 . - . ID=rna-AD11_RS17795;Parent=gene-AD11_RS17795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17795;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLL01000142.1 cmsearch exon 1 972 . - . ID=exon-AD11_RS17795-1;Parent=rna-AD11_RS17795;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS17795;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLL01000142.1 RefSeq gene 1378 2540 . - . ID=gene-AD11_RS17800;Name=AD11_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17800;old_locus_tag=AD11_2953 NZ_JJLL01000142.1 Protein Homology CDS 2279 2540 . - 0 ID=cds-WP_103852365.1-6;Parent=gene-AD11_RS17800;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS17800;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000142.1 Protein Homology CDS 1378 2279 . - 2 ID=cds-WP_103852365.1-6;Parent=gene-AD11_RS17800;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS17800;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 ##sequence-region NZ_JJLL01000143.1 1 129007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000143.1 RefSeq region 1 129007 . + . ID=NZ_JJLL01000143.1:1..129007;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000143.1 RefSeq gene 146 1354 . + . ID=gene-AD11_RS17810;Name=AD11_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS17810;old_locus_tag=AD11_2955 NZ_JJLL01000143.1 Protein Homology CDS 146 1354 . + 0 ID=cds-WP_077747060.1-2;Parent=gene-AD11_RS17810;Dbxref=GenBank:WP_077747060.1;Name=WP_077747060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575699.1;locus_tag=AD11_RS17810;product=type II secretion system protein GspD;protein_id=WP_077747060.1;transl_table=11 NZ_JJLL01000143.1 RefSeq pseudogene 1515 1631 . + . ID=gene-AD11_RS32685;Name=AD11_RS32685;end_range=1631,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32685;partial=true;pseudo=true;start_range=.,1515 NZ_JJLL01000143.1 Protein Homology CDS 1515 1631 . + 0 ID=cds-AD11_RS32685;Parent=gene-AD11_RS32685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1631,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851036.1;locus_tag=AD11_RS32685;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;start_range=.,1515;transl_table=11 NZ_JJLL01000143.1 RefSeq pseudogene 1619 1717 . + . ID=gene-AD11_RS32690;Name=AD11_RS32690;end_range=1717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32690;old_locus_tag=AD11_2956;partial=true;pseudo=true;start_range=.,1619 NZ_JJLL01000143.1 Protein Homology CDS 1619 1717 . + 0 ID=cds-AD11_RS32690;Parent=gene-AD11_RS32690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1717,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211765.1;locus_tag=AD11_RS32690;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,1619;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 2118 3032 . + . ID=gene-AD11_RS32695;Name=AD11_RS32695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32695;old_locus_tag=AD11_2957 NZ_JJLL01000143.1 GeneMarkS-2+ CDS 2118 3032 . + 0 ID=cds-WP_432757363.1;Parent=gene-AD11_RS32695;Dbxref=GenBank:WP_432757363.1;Name=WP_432757363.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32695;product=tyrosine-type recombinase/integrase;protein_id=WP_432757363.1;transl_table=11 NZ_JJLL01000143.1 RefSeq pseudogene 3016 3430 . - . ID=gene-AD11_RS17820;Name=AD11_RS17820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS17820;old_locus_tag=AD11_2958;partial=true;pseudo=true;start_range=.,3016 NZ_JJLL01000143.1 Protein Homology CDS 3016 3430 . - 0 ID=cds-AD11_RS17820;Parent=gene-AD11_RS17820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS17820;partial=true;product=transposase;pseudo=true;start_range=.,3016;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 3568 6141 . - . ID=gene-AD11_RS17825;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AD11_RS17825;old_locus_tag=AD11_2959 NZ_JJLL01000143.1 Protein Homology CDS 3568 6141 . - 0 ID=cds-WP_001235102.1;Parent=gene-AD11_RS17825;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AD11_RS17825;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 6271 7002 . - . ID=gene-AD11_RS17830;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AD11_RS17830;old_locus_tag=AD11_2960 NZ_JJLL01000143.1 Protein Homology CDS 6271 7002 . - 0 ID=cds-WP_000040169.1;Parent=gene-AD11_RS17830;Dbxref=GenBank:WP_000040169.1;Name=WP_000040169.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=AD11_RS17830;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000040169.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 6999 7979 . - . ID=gene-AD11_RS17835;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AD11_RS17835;old_locus_tag=AD11_2961 NZ_JJLL01000143.1 Protein Homology CDS 6999 7979 . - 0 ID=cds-WP_000079100.1;Parent=gene-AD11_RS17835;Dbxref=GenBank:WP_000079100.1;Name=WP_000079100.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AD11_RS17835;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 8114 8851 . + . ID=gene-AD11_RS17840;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AD11_RS17840;old_locus_tag=AD11_2962 NZ_JJLL01000143.1 Protein Homology CDS 8114 8851 . + 0 ID=cds-WP_000197686.1;Parent=gene-AD11_RS17840;Dbxref=GenBank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AD11_RS17840;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 9122 9463 . + . ID=gene-AD11_RS17850;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AD11_RS17850;old_locus_tag=AD11_2963 NZ_JJLL01000143.1 Protein Homology CDS 9122 9463 . + 0 ID=cds-WP_000178456.1;Parent=gene-AD11_RS17850;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AD11_RS17850;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JJLL01000143.1 cmsearch sequence_feature 9566 9691 . + . ID=id-NZ_JJLL01000143.1:9566..9691;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLL01000143.1 RefSeq gene 9567 9614 . + . ID=gene-AD11_RS31695;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AD11_RS31695 NZ_JJLL01000143.1 Protein Homology CDS 9567 9614 . + 0 ID=cds-WP_010723158.1;Parent=gene-AD11_RS31695;Dbxref=GenBank:WP_010723158.1;Name=WP_010723158.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417089.1;locus_tag=AD11_RS31695;product=phe operon leader peptide;protein_id=WP_010723158.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 9713 10873 . + . ID=gene-AD11_RS17855;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AD11_RS17855;old_locus_tag=AD11_2964 NZ_JJLL01000143.1 Protein Homology CDS 9713 10873 . + 0 ID=cds-WP_033865678.1;Parent=gene-AD11_RS17855;Dbxref=GenBank:WP_033865678.1;Name=WP_033865678.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AD11_RS17855;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_033865678.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 10916 12037 . - . ID=gene-AD11_RS17860;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AD11_RS17860;old_locus_tag=AD11_2965 NZ_JJLL01000143.1 Protein Homology CDS 10916 12037 . - 0 ID=cds-WP_000225221.1;Parent=gene-AD11_RS17860;Dbxref=GenBank:WP_000225221.1;Name=WP_000225221.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=AD11_RS17860;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225221.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 12048 13118 . - . ID=gene-AD11_RS17865;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AD11_RS17865;old_locus_tag=AD11_2966 NZ_JJLL01000143.1 Protein Homology CDS 12048 13118 . - 0 ID=cds-WP_001168037.1;Parent=gene-AD11_RS17865;Dbxref=GenBank:WP_001168037.1;Name=WP_001168037.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417092.1;locus_tag=AD11_RS17865;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168037.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 13328 13693 . + . ID=gene-AD11_RS17870;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=AD11_RS17870;old_locus_tag=AD11_2967 NZ_JJLL01000143.1 Protein Homology CDS 13328 13693 . + 0 ID=cds-WP_000976004.1;Parent=gene-AD11_RS17870;Dbxref=GenBank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AD11_RS17870;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 13843 14361 . + . ID=gene-AD11_RS17875;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=AD11_RS17875;old_locus_tag=AD11_2968 NZ_JJLL01000143.1 Protein Homology CDS 13843 14361 . + 0 ID=cds-WP_001212391.1;Parent=gene-AD11_RS17875;Dbxref=GenBank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AD11_RS17875;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 14351 15577 . + . ID=gene-AD11_RS17880;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AD11_RS17880;old_locus_tag=AD11_2969 NZ_JJLL01000143.1 Protein Homology CDS 14351 15577 . + 0 ID=cds-WP_077747108.1;Parent=gene-AD11_RS17880;Dbxref=GenBank:WP_077747108.1;Name=WP_077747108.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AD11_RS17880;product=diguanylate cyclase DgcN;protein_id=WP_077747108.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 15593 16075 . + . ID=gene-AD11_RS17885;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AD11_RS17885;old_locus_tag=AD11_2970 NZ_JJLL01000143.1 Protein Homology CDS 15593 16075 . + 0 ID=cds-WP_000589847.1;Parent=gene-AD11_RS17885;Dbxref=GenBank:WP_000589847.1;Name=WP_000589847.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417096.1;locus_tag=AD11_RS17885;product=OmpA family protein;protein_id=WP_000589847.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 16151 16498 . - . ID=gene-AD11_RS17890;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AD11_RS17890;old_locus_tag=AD11_2971 NZ_JJLL01000143.1 Protein Homology CDS 16151 16498 . - 0 ID=cds-WP_000065253.1;Parent=gene-AD11_RS17890;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AD11_RS17890;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 16540 17307 . - . ID=gene-AD11_RS17895;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AD11_RS17895;old_locus_tag=AD11_2972 NZ_JJLL01000143.1 Protein Homology CDS 16540 17307 . - 0 ID=cds-WP_000264777.1;Parent=gene-AD11_RS17895;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AD11_RS17895;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 17338 17886 . - . ID=gene-AD11_RS17900;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AD11_RS17900;old_locus_tag=AD11_2973 NZ_JJLL01000143.1 Protein Homology CDS 17338 17886 . - 0 ID=cds-WP_000043335.1;Parent=gene-AD11_RS17900;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AD11_RS17900;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 17905 18153 . - . ID=gene-AD11_RS17905;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AD11_RS17905;old_locus_tag=AD11_2974 NZ_JJLL01000143.1 Protein Homology CDS 17905 18153 . - 0 ID=cds-WP_000256450.1;Parent=gene-AD11_RS17905;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AD11_RS17905;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 18402 19763 . - . ID=gene-AD11_RS17910;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AD11_RS17910;old_locus_tag=AD11_2975 NZ_JJLL01000143.1 Protein Homology CDS 18402 19763 . - 0 ID=cds-WP_000460035.1;Parent=gene-AD11_RS17910;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AD11_RS17910;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 19930 20721 . + . ID=gene-AD11_RS17915;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AD11_RS17915;old_locus_tag=AD11_2976 NZ_JJLL01000143.1 Protein Homology CDS 19930 20721 . + 0 ID=cds-WP_001338897.1;Parent=gene-AD11_RS17915;Dbxref=GenBank:WP_001338897.1;Name=WP_001338897.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AD11_RS17915;product=cytochrome C assembly family protein;protein_id=WP_001338897.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 20742 22028 . + . ID=gene-AD11_RS17920;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AD11_RS17920;old_locus_tag=AD11_2977 NZ_JJLL01000143.1 Protein Homology CDS 20742 22028 . + 0 ID=cds-WP_010723175.1;Parent=gene-AD11_RS17920;Dbxref=GenBank:WP_010723175.1;Name=WP_010723175.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AD11_RS17920;product=HlyC/CorC family transporter;protein_id=WP_010723175.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 22083 22676 . - . ID=gene-AD11_RS17925;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AD11_RS17925;old_locus_tag=AD11_2978 NZ_JJLL01000143.1 Protein Homology CDS 22083 22676 . - 0 ID=cds-WP_001296310.1;Parent=gene-AD11_RS17925;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AD11_RS17925;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 22799 23677 . + . ID=gene-AD11_RS17935;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AD11_RS17935;old_locus_tag=AD11_2980 NZ_JJLL01000143.1 Protein Homology CDS 22799 23677 . + 0 ID=cds-WP_032083618.1;Parent=gene-AD11_RS17935;Dbxref=GenBank:WP_032083618.1;Name=WP_032083618.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AD11_RS17935;product=NAD(+) kinase;protein_id=WP_032083618.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 23763 25424 . + . ID=gene-AD11_RS17940;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AD11_RS17940;old_locus_tag=AD11_2981 NZ_JJLL01000143.1 Protein Homology CDS 23763 25424 . + 0 ID=cds-WP_000880910.1;Parent=gene-AD11_RS17940;Dbxref=GenBank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AD11_RS17940;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 25573 25914 . + . ID=gene-AD11_RS17945;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AD11_RS17945;old_locus_tag=AD11_2982 NZ_JJLL01000143.1 Protein Homology CDS 25573 25914 . + 0 ID=cds-WP_001203437.1;Parent=gene-AD11_RS17945;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AD11_RS17945;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 25976 26266 . - . ID=gene-AD11_RS17950;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AD11_RS17950;old_locus_tag=AD11_2983 NZ_JJLL01000143.1 Protein Homology CDS 25976 26266 . - 0 ID=cds-WP_001117838.1;Parent=gene-AD11_RS17950;Dbxref=GenBank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AD11_RS17950;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 26256 26693 . - . ID=gene-AD11_RS17955;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AD11_RS17955;old_locus_tag=AD11_2984 NZ_JJLL01000143.1 Protein Homology CDS 26256 26693 . - 0 ID=cds-WP_001341638.1;Parent=gene-AD11_RS17955;Dbxref=GenBank:WP_001341638.1;Name=WP_001341638.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AD11_RS17955;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001341638.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 26864 27346 . + . ID=gene-AD11_RS17960;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AD11_RS17960;old_locus_tag=AD11_2985 NZ_JJLL01000143.1 Protein Homology CDS 26864 27346 . + 0 ID=cds-WP_000162574.1;Parent=gene-AD11_RS17960;Dbxref=GenBank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AD11_RS17960;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 27561 27923 . + . ID=gene-AD11_RS27660;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AD11_RS27660 NZ_JJLL01000143.1 cmsearch tmRNA 27561 27923 . + . ID=rna-AD11_RS27660;Parent=gene-AD11_RS27660;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27660;product=transfer-messenger RNA NZ_JJLL01000143.1 cmsearch exon 27561 27923 . + . ID=exon-AD11_RS27660-1;Parent=rna-AD11_RS27660;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27660;product=transfer-messenger RNA NZ_JJLL01000143.1 RefSeq gene 28084 32664 . - . ID=gene-AD11_RS17965;Name=ypjA;gbkey=Gene;gene=ypjA;gene_biotype=protein_coding;locus_tag=AD11_RS17965;old_locus_tag=AD11_2986 NZ_JJLL01000143.1 Protein Homology CDS 28084 32664 . - 0 ID=cds-WP_040091707.1;Parent=gene-AD11_RS17965;Dbxref=GenBank:WP_040091707.1;Name=WP_040091707.1;gbkey=CDS;gene=ypjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417134.2;locus_tag=AD11_RS17965;product=adhesin-like autotransporter YpjA/EhaD;protein_id=WP_040091707.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 32729 32848 . - . ID=gene-AD11_RS29595;Name=AD11_RS29595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS29595;old_locus_tag=AD11_2987 NZ_JJLL01000143.1 Protein Homology CDS 32729 32848 . - 0 ID=cds-WP_001120794.1;Parent=gene-AD11_RS29595;Dbxref=GenBank:WP_001120794.1;Name=WP_001120794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AD11_RS29595;product=hypothetical protein;protein_id=WP_001120794.1;transl_table=11 NZ_JJLL01000143.1 RefSeq pseudogene 33072 33239 . - . ID=gene-AD11_RS32700;Name=AD11_RS32700;end_range=33239,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32700;partial=true;pseudo=true;start_range=.,33072 NZ_JJLL01000143.1 Protein Homology CDS 33072 33239 . - 0 ID=cds-AD11_RS32700;Parent=gene-AD11_RS32700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=33239,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415676.1;locus_tag=AD11_RS32700;partial=true;product=recombinase family protein;pseudo=true;start_range=.,33072;transl_table=11 NZ_JJLL01000143.1 RefSeq pseudogene 33575 34948 . - . ID=gene-AD11_RS17970;Name=ypjCB;gbkey=Gene;gene=ypjCB;gene_biotype=pseudogene;locus_tag=AD11_RS17970;pseudo=true NZ_JJLL01000143.1 Protein Homology CDS 33575 34948 . - 0 ID=cds-AD11_RS17970;Parent=gene-AD11_RS17970;Note=internal stop;gbkey=CDS;gene=ypjCB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961353.1;locus_tag=AD11_RS17970;product=YpjCB family protein;pseudo=true;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 35698 35773 . - . ID=gene-AD11_RS17975;Name=AD11_RS17975;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS17975;old_locus_tag=AD11_2989 NZ_JJLL01000143.1 tRNAscan-SE tRNA 35698 35773 . - . ID=rna-AD11_RS17975;Parent=gene-AD11_RS17975;anticodon=(pos:complement(35738..35740));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17975;product=tRNA-Ile NZ_JJLL01000143.1 tRNAscan-SE exon 35698 35773 . - . ID=exon-AD11_RS17975-1;Parent=rna-AD11_RS17975;anticodon=(pos:complement(35738..35740));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS17975;product=tRNA-Ile NZ_JJLL01000143.1 RefSeq pseudogene 36333 38585 . + . ID=gene-AD11_RS29610;Name=AD11_RS29610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29610;pseudo=true NZ_JJLL01000143.1 Protein Homology CDS 36333 38585 . + 0 ID=cds-AD11_RS29610;Parent=gene-AD11_RS29610;Note=internal stop;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439272.1;locus_tag=AD11_RS29610;product=alpha-amylase family glycosyl hydrolase;pseudo=true;transl_table=11 NZ_JJLL01000143.1 RefSeq pseudogene 38922 39878 . + . ID=gene-AD11_RS17990;Name=glaH;end_range=39878,.;gbkey=Gene;gene=glaH;gene_biotype=pseudogene;locus_tag=AD11_RS17990;old_locus_tag=AD11_2991;partial=true;pseudo=true NZ_JJLL01000143.1 Protein Homology CDS 38922 39878 . + 0 ID=cds-AD11_RS17990;Parent=gene-AD11_RS17990;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0050498;end_range=39878,.;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311547.2;locus_tag=AD11_RS17990;partial=true;product=glutarate dioxygenase GlaH;pseudo=true;transl_table=11 NZ_JJLL01000143.1 RefSeq pseudogene 39881 40921 . + . ID=gene-AD11_RS17995;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=pseudogene;locus_tag=AD11_RS17995;old_locus_tag=AD11_2992;partial=true;pseudo=true;start_range=.,39881 NZ_JJLL01000143.1 Protein Homology CDS 39881 40921 . + 0 ID=cds-AD11_RS17995;Parent=gene-AD11_RS17995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311548.2;locus_tag=AD11_RS17995;partial=true;product=L-2-hydroxyglutarate oxidase;pseudo=true;start_range=.,39881;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 40944 42392 . + . ID=gene-AD11_RS18000;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AD11_RS18000;old_locus_tag=AD11_2993 NZ_JJLL01000143.1 Protein Homology CDS 40944 42392 . + 0 ID=cds-WP_000772820.1;Parent=gene-AD11_RS18000;Dbxref=GenBank:WP_000772820.1;Name=WP_000772820.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311549.1;locus_tag=AD11_RS18000;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772820.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 42406 43686 . + . ID=gene-AD11_RS18005;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AD11_RS18005;old_locus_tag=AD11_2994 NZ_JJLL01000143.1 Protein Homology CDS 42406 43686 . + 0 ID=cds-WP_000097662.1;Parent=gene-AD11_RS18005;Dbxref=GenBank:WP_000097662.1;Name=WP_000097662.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417148.1;locus_tag=AD11_RS18005;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_000097662.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 43924 45324 . + . ID=gene-AD11_RS18010;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AD11_RS18010;old_locus_tag=AD11_2995 NZ_JJLL01000143.1 Protein Homology CDS 43924 45324 . + 0 ID=cds-WP_001301367.1;Parent=gene-AD11_RS18010;Dbxref=GenBank:WP_001301367.1;Name=WP_001301367.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311551.1;locus_tag=AD11_RS18010;product=GABA permease;protein_id=WP_001301367.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 45345 46007 . + . ID=gene-AD11_RS18015;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AD11_RS18015;old_locus_tag=AD11_2996 NZ_JJLL01000143.1 Protein Homology CDS 45345 46007 . + 0 ID=cds-WP_000156811.1;Parent=gene-AD11_RS18015;Dbxref=GenBank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AD11_RS18015;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 46008 46457 . - . ID=gene-AD11_RS18020;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AD11_RS18020;old_locus_tag=AD11_2997 NZ_JJLL01000143.1 Protein Homology CDS 46008 46457 . - 0 ID=cds-WP_000522415.1;Parent=gene-AD11_RS18020;Dbxref=GenBank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AD11_RS18020;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 46541 46699 . - . ID=gene-AD11_RS18025;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=AD11_RS18025;old_locus_tag=AD11_2998 NZ_JJLL01000143.1 Protein Homology CDS 46541 46699 . - 0 ID=cds-WP_000508177.1;Parent=gene-AD11_RS18025;Dbxref=GenBank:WP_000508177.1;Name=WP_000508177.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqaE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AD11_RS18025;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 46882 47181 . + . ID=gene-AD11_RS18030;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=AD11_RS18030;old_locus_tag=AD11_2999 NZ_JJLL01000143.1 Protein Homology CDS 46882 47181 . + 0 ID=cds-WP_000137280.1;Parent=gene-AD11_RS18030;Dbxref=GenBank:WP_000137280.1;Name=WP_000137280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ygaV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AD11_RS18030;product=ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 47191 47715 . + . ID=gene-AD11_RS18035;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AD11_RS18035;old_locus_tag=AD11_3000 NZ_JJLL01000143.1 Protein Homology CDS 47191 47715 . + 0 ID=cds-WP_001229442.1;Parent=gene-AD11_RS18035;Dbxref=GenBank:WP_001229442.1;Name=WP_001229442.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AD11_RS18035;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229442.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 47762 48166 . - . ID=gene-AD11_RS18040;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AD11_RS18040;old_locus_tag=AD11_3001 NZ_JJLL01000143.1 Protein Homology CDS 47762 48166 . - 0 ID=cds-WP_000115383.1;Parent=gene-AD11_RS18040;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AD11_RS18040;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 48834 49283 . + . ID=gene-AD11_RS18045;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AD11_RS18045;old_locus_tag=AD11_3002 NZ_JJLL01000143.1 Protein Homology CDS 48834 49283 . + 0 ID=cds-WP_000492656.1;Parent=gene-AD11_RS18045;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AD11_RS18045;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 49320 49664 . - . ID=gene-AD11_RS18050;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=AD11_RS18050;old_locus_tag=AD11_3003 NZ_JJLL01000143.1 Protein Homology CDS 49320 49664 . - 0 ID=cds-WP_000281320.1;Parent=gene-AD11_RS18050;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AD11_RS18050;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 49816 50145 . + . ID=gene-AD11_RS18055;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=AD11_RS18055;old_locus_tag=AD11_3004 NZ_JJLL01000143.1 Protein Homology CDS 49816 50145 . + 0 ID=cds-WP_001295174.1;Parent=gene-AD11_RS18055;Dbxref=GenBank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AD11_RS18055;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 50393 50638 . + . ID=gene-AD11_RS18060;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AD11_RS18060;old_locus_tag=AD11_3005 NZ_JJLL01000143.1 Protein Homology CDS 50393 50638 . + 0 ID=cds-WP_001223227.1;Parent=gene-AD11_RS18060;Dbxref=GenBank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AD11_RS18060;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 50635 51045 . + . ID=gene-AD11_RS18065;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AD11_RS18065;old_locus_tag=AD11_3006 NZ_JJLL01000143.1 Protein Homology CDS 50635 51045 . + 0 ID=cds-WP_000080947.1;Parent=gene-AD11_RS18065;Dbxref=GenBank:WP_000080947.1;Name=WP_000080947.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AD11_RS18065;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080947.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 51018 53162 . + . ID=gene-AD11_RS18070;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AD11_RS18070;old_locus_tag=AD11_3007 NZ_JJLL01000143.1 Protein Homology CDS 51018 53162 . + 0 ID=cds-WP_033865680.1;Parent=gene-AD11_RS18070;Dbxref=GenBank:WP_033865680.1;Name=WP_033865680.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AD11_RS18070;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_033865680.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 53172 54131 . + . ID=gene-AD11_RS18075;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AD11_RS18075;old_locus_tag=AD11_3008 NZ_JJLL01000143.1 Protein Homology CDS 53172 54131 . + 0 ID=cds-WP_000777969.1;Parent=gene-AD11_RS18075;Dbxref=GenBank:WP_000777969.1;Name=WP_000777969.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AD11_RS18075;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 54486 55688 . + . ID=gene-AD11_RS18080;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AD11_RS18080;old_locus_tag=AD11_3009 NZ_JJLL01000143.1 Protein Homology CDS 54486 55688 . + 0 ID=cds-WP_032083820.1;Parent=gene-AD11_RS18080;Dbxref=GenBank:WP_032083820.1;Name=WP_032083820.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AD11_RS18080;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_032083820.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 55681 56745 . + . ID=gene-AD11_RS18085;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AD11_RS18085;old_locus_tag=AD11_3010 NZ_JJLL01000143.1 Protein Homology CDS 55681 56745 . + 0 ID=cds-WP_000774988.1;Parent=gene-AD11_RS18085;Dbxref=GenBank:WP_000774988.1;Name=WP_000774988.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=AD11_RS18085;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774988.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 56802 57794 . + . ID=gene-AD11_RS18090;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AD11_RS18090;old_locus_tag=AD11_3011 NZ_JJLL01000143.1 Protein Homology CDS 56802 57794 . + 0 ID=cds-WP_001216521.1;Parent=gene-AD11_RS18090;Dbxref=GenBank:WP_001216521.1;Name=WP_001216521.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AD11_RS18090;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216521.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 58086 59270 . + . ID=gene-AD11_RS18095;Name=AD11_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18095;old_locus_tag=AD11_3013 NZ_JJLL01000143.1 Protein Homology CDS 58086 59270 . + 0 ID=cds-WP_000165699.1;Parent=gene-AD11_RS18095;Dbxref=GenBank:WP_000165699.1;Name=WP_000165699.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AD11_RS18095;product=MFS transporter;protein_id=WP_000165699.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 59394 60131 . + . ID=gene-AD11_RS18100;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AD11_RS18100;old_locus_tag=AD11_3014 NZ_JJLL01000143.1 Protein Homology CDS 59394 60131 . + 0 ID=cds-WP_000445651.1;Parent=gene-AD11_RS18100;Dbxref=GenBank:WP_000445651.1;Name=WP_000445651.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417167.1;locus_tag=AD11_RS18100;product=L-valine exporter subunit YgaZ;protein_id=WP_000445651.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 60121 60456 . + . ID=gene-AD11_RS18105;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AD11_RS18105;old_locus_tag=AD11_3015 NZ_JJLL01000143.1 Protein Homology CDS 60121 60456 . + 0 ID=cds-WP_000119763.1;Parent=gene-AD11_RS18105;Dbxref=GenBank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=AD11_RS18105;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 60547 61077 . + . ID=gene-AD11_RS18110;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AD11_RS18110;old_locus_tag=AD11_3016 NZ_JJLL01000143.1 Protein Homology CDS 60547 61077 . + 0 ID=cds-WP_000378442.1;Parent=gene-AD11_RS18110;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AD11_RS18110;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 61204 62376 . + . ID=gene-AD11_RS18115;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AD11_RS18115;old_locus_tag=AD11_3018 NZ_JJLL01000143.1 Protein Homology CDS 61204 62376 . + 0 ID=cds-WP_001326681.1;Parent=gene-AD11_RS18115;Dbxref=GenBank:WP_001326681.1;Name=WP_001326681.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417170.1;locus_tag=AD11_RS18115;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_001326681.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 62393 63931 . + . ID=gene-AD11_RS18120;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AD11_RS18120;old_locus_tag=AD11_3019 NZ_JJLL01000143.1 Protein Homology CDS 62393 63931 . + 0 ID=cds-WP_001295176.1;Parent=gene-AD11_RS18120;Dbxref=GenBank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AD11_RS18120;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 63995 64510 . - . ID=gene-AD11_RS18125;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AD11_RS18125;old_locus_tag=AD11_3020 NZ_JJLL01000143.1 Protein Homology CDS 63995 64510 . - 0 ID=cds-WP_001130211.1;Parent=gene-AD11_RS18125;Dbxref=GenBank:WP_001130211.1;Name=WP_001130211.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AD11_RS18125;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 64660 66216 . - . ID=gene-AD11_RS18130;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AD11_RS18130;old_locus_tag=AD11_3021 NZ_JJLL01000143.1 Protein Homology CDS 64660 66216 . - 0 ID=cds-WP_000611804.1;Parent=gene-AD11_RS18130;Dbxref=GenBank:WP_000611804.1;Name=WP_000611804.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AD11_RS18130;product=glutamate--cysteine ligase;protein_id=WP_000611804.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 66289 66717 . - . ID=gene-AD11_RS18135;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AD11_RS18135;old_locus_tag=AD11_3022 NZ_JJLL01000143.1 Protein Homology CDS 66289 66717 . - 0 ID=cds-WP_001287454.1;Parent=gene-AD11_RS18135;Dbxref=GenBank:WP_001287454.1;Name=WP_001287454.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AD11_RS18135;product=YqaA family protein;protein_id=WP_001287454.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 66714 67280 . - . ID=gene-AD11_RS18140;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AD11_RS18140;old_locus_tag=AD11_3023 NZ_JJLL01000143.1 Protein Homology CDS 66714 67280 . - 0 ID=cds-WP_000273290.1;Parent=gene-AD11_RS18140;Dbxref=GenBank:WP_000273290.1;Name=WP_000273290.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417175.1;locus_tag=AD11_RS18140;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273290.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 67561 67637 . - . ID=gene-AD11_RS18150;Name=AD11_RS18150;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS18150;old_locus_tag=AD11_3024 NZ_JJLL01000143.1 tRNAscan-SE tRNA 67561 67637 . - . ID=rna-AD11_RS18150;Parent=gene-AD11_RS18150;anticodon=(pos:complement(67601..67603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18150;product=tRNA-Arg NZ_JJLL01000143.1 tRNAscan-SE exon 67561 67637 . - . ID=exon-AD11_RS18150-1;Parent=rna-AD11_RS18150;anticodon=(pos:complement(67601..67603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18150;product=tRNA-Arg NZ_JJLL01000143.1 RefSeq gene 67836 67912 . - . ID=gene-AD11_RS18155;Name=AD11_RS18155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS18155;old_locus_tag=AD11_3025 NZ_JJLL01000143.1 tRNAscan-SE tRNA 67836 67912 . - . ID=rna-AD11_RS18155;Parent=gene-AD11_RS18155;anticodon=(pos:complement(67876..67878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18155;product=tRNA-Arg NZ_JJLL01000143.1 tRNAscan-SE exon 67836 67912 . - . ID=exon-AD11_RS18155-1;Parent=rna-AD11_RS18155;anticodon=(pos:complement(67876..67878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18155;product=tRNA-Arg NZ_JJLL01000143.1 RefSeq gene 68111 68187 . - . ID=gene-AD11_RS18160;Name=AD11_RS18160;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS18160;old_locus_tag=AD11_3026 NZ_JJLL01000143.1 tRNAscan-SE tRNA 68111 68187 . - . ID=rna-AD11_RS18160;Parent=gene-AD11_RS18160;anticodon=(pos:complement(68151..68153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18160;product=tRNA-Arg NZ_JJLL01000143.1 tRNAscan-SE exon 68111 68187 . - . ID=exon-AD11_RS18160-1;Parent=rna-AD11_RS18160;anticodon=(pos:complement(68151..68153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18160;product=tRNA-Arg NZ_JJLL01000143.1 RefSeq gene 68191 68283 . - . ID=gene-AD11_RS18165;Name=AD11_RS18165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS18165;old_locus_tag=AD11_3027 NZ_JJLL01000143.1 tRNAscan-SE tRNA 68191 68283 . - . ID=rna-AD11_RS18165;Parent=gene-AD11_RS18165;anticodon=(pos:complement(68247..68249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18165;product=tRNA-Ser NZ_JJLL01000143.1 tRNAscan-SE exon 68191 68283 . - . ID=exon-AD11_RS18165-1;Parent=rna-AD11_RS18165;anticodon=(pos:complement(68247..68249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18165;product=tRNA-Ser NZ_JJLL01000143.1 RefSeq gene 68599 68784 . - . ID=gene-AD11_RS18170;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AD11_RS18170;old_locus_tag=AD11_3028 NZ_JJLL01000143.1 Protein Homology CDS 68599 68784 . - 0 ID=cds-WP_000906486.1;Parent=gene-AD11_RS18170;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AD11_RS18170;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 69019 71649 . - . ID=gene-AD11_RS18175;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AD11_RS18175;old_locus_tag=AD11_3030 NZ_JJLL01000143.1 Protein Homology CDS 69019 71649 . - 0 ID=cds-WP_032083819.1;Parent=gene-AD11_RS18175;Dbxref=GenBank:WP_032083819.1;Name=WP_032083819.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417177.1;locus_tag=AD11_RS18175;product=alanine--tRNA ligase;protein_id=WP_032083819.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 71777 72277 . - . ID=gene-AD11_RS18185;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AD11_RS18185;old_locus_tag=AD11_3032 NZ_JJLL01000143.1 Protein Homology CDS 71777 72277 . - 0 ID=cds-WP_000140508.1;Parent=gene-AD11_RS18185;Dbxref=GenBank:WP_000140508.1;Name=WP_000140508.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417178.1;locus_tag=AD11_RS18185;product=recombination regulator RecX;protein_id=WP_000140508.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 72346 73407 . - . ID=gene-AD11_RS18190;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AD11_RS18190;old_locus_tag=AD11_3033 NZ_JJLL01000143.1 Protein Homology CDS 72346 73407 . - 0 ID=cds-WP_000963143.1;Parent=gene-AD11_RS18190;Dbxref=GenBank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AD11_RS18190;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 73487 73984 . - . ID=gene-AD11_RS18195;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AD11_RS18195;old_locus_tag=AD11_3034 NZ_JJLL01000143.1 Protein Homology CDS 73487 73984 . - 0 ID=cds-WP_000132231.1;Parent=gene-AD11_RS18195;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AD11_RS18195;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 74129 75214 . - . ID=gene-AD11_RS18200;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AD11_RS18200;old_locus_tag=AD11_3035 NZ_JJLL01000143.1 Protein Homology CDS 74129 75214 . - 0 ID=cds-WP_001295177.1;Parent=gene-AD11_RS18200;Dbxref=GenBank:WP_001295177.1;Name=WP_001295177.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AD11_RS18200;product=lytic murein transglycosylase B;protein_id=WP_001295177.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 75470 76033 . + . ID=gene-AD11_RS18205;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AD11_RS18205;old_locus_tag=AD11_3036 NZ_JJLL01000143.1 Protein Homology CDS 75470 76033 . + 0 ID=cds-WP_000573321.1;Parent=gene-AD11_RS18205;Dbxref=GenBank:WP_000573321.1;Name=WP_000573321.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AD11_RS18205;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573321.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 76030 76989 . + . ID=gene-AD11_RS18210;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AD11_RS18210;old_locus_tag=AD11_3037 NZ_JJLL01000143.1 Protein Homology CDS 76030 76989 . + 0 ID=cds-WP_000148878.1;Parent=gene-AD11_RS18210;Dbxref=GenBank:WP_000148878.1;Name=WP_000148878.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026181.1;locus_tag=AD11_RS18210;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000148878.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 77000 77371 . + . ID=gene-AD11_RS18215;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AD11_RS18215;old_locus_tag=AD11_3038 NZ_JJLL01000143.1 Protein Homology CDS 77000 77371 . + 0 ID=cds-WP_000216194.1;Parent=gene-AD11_RS18215;Dbxref=GenBank:WP_000216194.1;Name=WP_000216194.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417184.1;locus_tag=AD11_RS18215;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216194.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 77375 78154 . + . ID=gene-AD11_RS18220;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AD11_RS18220;old_locus_tag=AD11_3039 NZ_JJLL01000143.1 Protein Homology CDS 77375 78154 . + 0 ID=cds-WP_001077358.1;Parent=gene-AD11_RS18220;Dbxref=GenBank:WP_001077358.1;Name=WP_001077358.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AD11_RS18220;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077358.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 78259 78618 . + . ID=gene-AD11_RS18225;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AD11_RS18225;old_locus_tag=AD11_3040 NZ_JJLL01000143.1 Protein Homology CDS 78259 78618 . + 0 ID=cds-WP_000252908.1;Parent=gene-AD11_RS18225;Dbxref=GenBank:WP_000252908.1;Name=WP_000252908.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AD11_RS18225;product=transcriptional regulator GutM;protein_id=WP_000252908.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 78685 79458 . + . ID=gene-AD11_RS18230;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AD11_RS18230;old_locus_tag=AD11_3041 NZ_JJLL01000143.1 Protein Homology CDS 78685 79458 . + 0 ID=cds-WP_000804550.1;Parent=gene-AD11_RS18230;Dbxref=GenBank:WP_000804550.1;Name=WP_000804550.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AD11_RS18230;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 79451 80416 . + . ID=gene-AD11_RS18235;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AD11_RS18235;old_locus_tag=AD11_3042 NZ_JJLL01000143.1 Protein Homology CDS 79451 80416 . + 0 ID=cds-WP_001287420.1;Parent=gene-AD11_RS18235;Dbxref=GenBank:WP_001287420.1;Name=WP_001287420.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AD11_RS18235;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287420.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 80413 81927 . - . ID=gene-AD11_RS18240;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AD11_RS18240;old_locus_tag=AD11_3043 NZ_JJLL01000143.1 Protein Homology CDS 80413 81927 . - 0 ID=cds-WP_000010749.1;Parent=gene-AD11_RS18240;Dbxref=GenBank:WP_000010749.1;Name=WP_000010749.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417189.2;locus_tag=AD11_RS18240;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010749.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 82114 83553 . + . ID=gene-AD11_RS18245;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AD11_RS18245;old_locus_tag=AD11_3044 NZ_JJLL01000143.1 Protein Homology CDS 82114 83553 . + 0 ID=cds-WP_000029634.1;Parent=gene-AD11_RS18245;Dbxref=GenBank:WP_000029634.1;Name=WP_000029634.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417190.1;locus_tag=AD11_RS18245;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_000029634.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 83550 84683 . + . ID=gene-AD11_RS18250;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AD11_RS18250;old_locus_tag=AD11_3045 NZ_JJLL01000143.1 Protein Homology CDS 83550 84683 . + 0 ID=cds-WP_000064752.1;Parent=gene-AD11_RS18250;Dbxref=GenBank:WP_000064752.1;Name=WP_000064752.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AD11_RS18250;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_000064752.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 84811 87063 . - . ID=gene-AD11_RS18255;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AD11_RS18255;old_locus_tag=AD11_3046 NZ_JJLL01000143.1 Protein Homology CDS 84811 87063 . - 0 ID=cds-WP_032170119.1;Parent=gene-AD11_RS18255;Dbxref=GenBank:WP_032170119.1;Name=WP_032170119.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AD11_RS18255;product=carbamoyltransferase HypF;protein_id=WP_032170119.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 87216 87743 . - . ID=gene-AD11_RS18260;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AD11_RS18260;old_locus_tag=AD11_3047 NZ_JJLL01000143.1 Protein Homology CDS 87216 87743 . - 0 ID=cds-WP_001078777.1;Parent=gene-AD11_RS18260;Dbxref=GenBank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AD11_RS18260;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 87892 88902 . - . ID=gene-AD11_RS18265;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AD11_RS18265;old_locus_tag=AD11_3049 NZ_JJLL01000143.1 Protein Homology CDS 87892 88902 . - 0 ID=cds-WP_001394680.1;Parent=gene-AD11_RS18265;Dbxref=GenBank:WP_001394680.1;Name=WP_001394680.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AD11_RS18265;product=DNA-binding transcriptional regulator AscG;protein_id=WP_001394680.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 89162 90619 . + . ID=gene-AD11_RS18270;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AD11_RS18270;old_locus_tag=AD11_3050 NZ_JJLL01000143.1 Protein Homology CDS 89162 90619 . + 0 ID=cds-WP_001107827.1;Parent=gene-AD11_RS18270;Dbxref=GenBank:WP_001107827.1;Name=WP_001107827.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AD11_RS18270;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_001107827.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 90628 92052 . + . ID=gene-AD11_RS18275;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AD11_RS18275;old_locus_tag=AD11_3051 NZ_JJLL01000143.1 Protein Homology CDS 90628 92052 . + 0 ID=cds-WP_001618800.1;Parent=gene-AD11_RS18275;Dbxref=GenBank:WP_001618800.1;Name=WP_001618800.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AD11_RS18275;product=6-phospho-beta-glucosidase AscB;protein_id=WP_001618800.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 92211 92681 . - . ID=gene-AD11_RS18280;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AD11_RS18280;old_locus_tag=AD11_3052 NZ_JJLL01000143.1 Protein Homology CDS 92211 92681 . - 0 ID=cds-WP_000132961.1;Parent=gene-AD11_RS18280;Dbxref=GenBank:WP_000132961.1;Name=WP_000132961.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AD11_RS18280;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 92674 93084 . - . ID=gene-AD11_RS18285;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AD11_RS18285;old_locus_tag=AD11_3053 NZ_JJLL01000143.1 Protein Homology CDS 92674 93084 . - 0 ID=cds-WP_001291921.1;Parent=gene-AD11_RS18285;Dbxref=GenBank:WP_001291921.1;Name=WP_001291921.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AD11_RS18285;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291921.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 93081 93848 . - . ID=gene-AD11_RS18290;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AD11_RS18290;old_locus_tag=AD11_3054 NZ_JJLL01000143.1 Protein Homology CDS 93081 93848 . - 0 ID=cds-WP_000067392.1;Parent=gene-AD11_RS18290;Dbxref=GenBank:WP_000067392.1;Name=WP_000067392.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417199.1;locus_tag=AD11_RS18290;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067392.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 93848 94390 . - . ID=gene-AD11_RS18295;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AD11_RS18295;old_locus_tag=AD11_3055 NZ_JJLL01000143.1 Protein Homology CDS 93848 94390 . - 0 ID=cds-WP_000493785.1;Parent=gene-AD11_RS18295;Dbxref=GenBank:WP_000493785.1;Name=WP_000493785.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311603.1;locus_tag=AD11_RS18295;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493785.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 94400 96109 . - . ID=gene-AD11_RS18300;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AD11_RS18300;old_locus_tag=AD11_3056 NZ_JJLL01000143.1 Protein Homology CDS 94400 96109 . - 0 ID=cds-WP_001288122.1;Parent=gene-AD11_RS18300;Dbxref=GenBank:WP_001288122.1;Name=WP_001288122.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AD11_RS18300;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288122.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 96127 97050 . - . ID=gene-AD11_RS18305;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AD11_RS18305;old_locus_tag=AD11_3057 NZ_JJLL01000143.1 Protein Homology CDS 96127 97050 . - 0 ID=cds-WP_033865681.1;Parent=gene-AD11_RS18305;Dbxref=GenBank:WP_033865681.1;Name=WP_033865681.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AD11_RS18305;product=formate hydrogenlyase subunit HycD;protein_id=WP_033865681.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 97053 98879 . - . ID=gene-AD11_RS18310;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AD11_RS18310;old_locus_tag=AD11_3058 NZ_JJLL01000143.1 Protein Homology CDS 97053 98879 . - 0 ID=cds-WP_001274388.1;Parent=gene-AD11_RS18310;Dbxref=GenBank:WP_001274388.1;Name=WP_001274388.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AD11_RS18310;product=formate hydrogenlyase subunit 3;protein_id=WP_001274388.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 98876 99487 . - . ID=gene-AD11_RS18315;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AD11_RS18315;old_locus_tag=AD11_3059 NZ_JJLL01000143.1 Protein Homology CDS 98876 99487 . - 0 ID=cds-WP_001079186.1;Parent=gene-AD11_RS18315;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AD11_RS18315;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 99612 100073 . - . ID=gene-AD11_RS18325;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AD11_RS18325;old_locus_tag=AD11_3060 NZ_JJLL01000143.1 Protein Homology CDS 99612 100073 . - 0 ID=cds-WP_000158056.1;Parent=gene-AD11_RS18325;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AD11_RS18325;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 100285 100635 . + . ID=gene-AD11_RS18330;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AD11_RS18330;old_locus_tag=AD11_3061 NZ_JJLL01000143.1 Protein Homology CDS 100285 100635 . + 0 ID=cds-WP_033865689.1;Parent=gene-AD11_RS18330;Dbxref=GenBank:WP_033865689.1;Name=WP_033865689.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AD11_RS18330;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_033865689.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 100639 101511 . + . ID=gene-AD11_RS18335;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AD11_RS18335;old_locus_tag=AD11_3062 NZ_JJLL01000143.1 Protein Homology CDS 100639 101511 . + 0 ID=cds-WP_000337665.1;Parent=gene-AD11_RS18335;Dbxref=GenBank:WP_000337665.1;Name=WP_000337665.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AD11_RS18335;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_000337665.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 101502 101774 . + . ID=gene-AD11_RS18340;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AD11_RS18340;old_locus_tag=AD11_3063 NZ_JJLL01000143.1 Protein Homology CDS 101502 101774 . + 0 ID=cds-WP_000334881.1;Parent=gene-AD11_RS18340;Dbxref=GenBank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AD11_RS18340;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 101774 102895 . + . ID=gene-AD11_RS18345;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AD11_RS18345;old_locus_tag=AD11_3064 NZ_JJLL01000143.1 Protein Homology CDS 101774 102895 . + 0 ID=cds-WP_001212985.1;Parent=gene-AD11_RS18345;Dbxref=GenBank:WP_001212985.1;Name=WP_001212985.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417209.1;locus_tag=AD11_RS18345;product=hydrogenase formation protein HypD;protein_id=WP_001212985.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 102892 103902 . + . ID=gene-AD11_RS18350;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AD11_RS18350;old_locus_tag=AD11_3065 NZ_JJLL01000143.1 Protein Homology CDS 102892 103902 . + 0 ID=cds-WP_001059922.1;Parent=gene-AD11_RS18350;Dbxref=GenBank:WP_001059922.1;Name=WP_001059922.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AD11_RS18350;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059922.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 103976 106054 . + . ID=gene-AD11_RS18355;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AD11_RS18355;old_locus_tag=AD11_3066 NZ_JJLL01000143.1 Protein Homology CDS 103976 106054 . + 0 ID=cds-WP_033865682.1;Parent=gene-AD11_RS18355;Dbxref=GenBank:WP_033865682.1;Name=WP_033865682.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417211.1;locus_tag=AD11_RS18355;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_033865682.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 106091 106444 . - . ID=gene-AD11_RS18360;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AD11_RS18360;old_locus_tag=AD11_3067 NZ_JJLL01000143.1 Protein Homology CDS 106091 106444 . - 0 ID=cds-WP_000015497.1;Parent=gene-AD11_RS18360;Dbxref=GenBank:WP_000015497.1;Name=WP_000015497.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417212.1;locus_tag=AD11_RS18360;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015497.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 106476 106655 . - . ID=gene-AD11_RS18365;Name=AD11_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18365;old_locus_tag=AD11_3068 NZ_JJLL01000143.1 Protein Homology CDS 106476 106655 . - 0 ID=cds-WP_000611928.1;Parent=gene-AD11_RS18365;Dbxref=GenBank:WP_000611928.1;Name=WP_000611928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001363568.1;locus_tag=AD11_RS18365;product=hypothetical protein;protein_id=WP_000611928.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 106731 109292 . + . ID=gene-AD11_RS18370;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AD11_RS18370;old_locus_tag=AD11_3069 NZ_JJLL01000143.1 Protein Homology CDS 106731 109292 . + 0 ID=cds-WP_001272928.1;Parent=gene-AD11_RS18370;Dbxref=GenBank:WP_001272928.1;Name=WP_001272928.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417213.1;locus_tag=AD11_RS18370;product=DNA mismatch repair protein MutS;protein_id=WP_001272928.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 109398 110054 . + . ID=gene-AD11_RS18375;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AD11_RS18375;old_locus_tag=AD11_3070 NZ_JJLL01000143.1 Protein Homology CDS 109398 110054 . + 0 ID=cds-WP_001141320.1;Parent=gene-AD11_RS18375;Dbxref=GenBank:WP_001141320.1;Name=WP_001141320.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311617.1;locus_tag=AD11_RS18375;product=protein-serine/threonine phosphatase;protein_id=WP_001141320.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 110105 110872 . - . ID=gene-AD11_RS18380;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AD11_RS18380;old_locus_tag=AD11_3071 NZ_JJLL01000143.1 Protein Homology CDS 110105 110872 . - 0 ID=cds-WP_001295181.1;Parent=gene-AD11_RS18380;Dbxref=GenBank:WP_001295181.1;Name=WP_001295181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AD11_RS18380;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001295181.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 111068 111976 . + . ID=gene-AD11_RS18385;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AD11_RS18385;old_locus_tag=AD11_3072 NZ_JJLL01000143.1 Protein Homology CDS 111068 111976 . + 0 ID=cds-WP_000847985.1;Parent=gene-AD11_RS18385;Dbxref=GenBank:WP_000847985.1;Name=WP_000847985.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AD11_RS18385;product=L-threonate dehydrogenase;protein_id=WP_000847985.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 111973 113235 . + . ID=gene-AD11_RS18390;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AD11_RS18390;old_locus_tag=AD11_3073 NZ_JJLL01000143.1 Protein Homology CDS 111973 113235 . + 0 ID=cds-WP_033865683.1;Parent=gene-AD11_RS18390;Dbxref=GenBank:WP_033865683.1;Name=WP_033865683.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AD11_RS18390;product=3-oxo-tetronate kinase;protein_id=WP_033865683.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 113232 113870 . + . ID=gene-AD11_RS18395;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=AD11_RS18395;old_locus_tag=AD11_3074 NZ_JJLL01000143.1 Protein Homology CDS 113232 113870 . + 0 ID=cds-WP_001278994.1;Parent=gene-AD11_RS18395;Dbxref=GenBank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AD11_RS18395;product=aldolase;protein_id=WP_001278994.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 113875 114651 . + . ID=gene-AD11_RS18400;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AD11_RS18400;old_locus_tag=AD11_3075 NZ_JJLL01000143.1 Protein Homology CDS 113875 114651 . + 0 ID=cds-WP_001136918.1;Parent=gene-AD11_RS18400;Dbxref=GenBank:WP_001136918.1;Name=WP_001136918.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AD11_RS18400;product=HPr family phosphocarrier protein;protein_id=WP_001136918.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 114740 116104 . + . ID=gene-AD11_RS18405;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=protein_coding;locus_tag=AD11_RS18405;old_locus_tag=AD11_3076 NZ_JJLL01000143.1 Protein Homology CDS 114740 116104 . + 0 ID=cds-WP_000104441.1;Parent=gene-AD11_RS18405;Dbxref=GenBank:WP_000104441.1;Name=WP_000104441.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AD11_RS18405;product=GntP family transporter;protein_id=WP_000104441.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 116198 117190 . - . ID=gene-AD11_RS18410;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AD11_RS18410;old_locus_tag=AD11_3077 NZ_JJLL01000143.1 Protein Homology CDS 116198 117190 . - 0 ID=cds-WP_000081550.1;Parent=gene-AD11_RS18410;Dbxref=GenBank:WP_000081550.1;Name=WP_000081550.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AD11_RS18410;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081550.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 117253 118347 . - . ID=gene-AD11_RS18415;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AD11_RS18415;old_locus_tag=AD11_3078 NZ_JJLL01000143.1 Protein Homology CDS 117253 118347 . - 0 ID=cds-WP_224692580.1;Parent=gene-AD11_RS18415;Dbxref=GenBank:WP_224692580.1;Name=WP_224692580.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AD11_RS18415;product=murein hydrolase activator NlpD;protein_id=WP_224692580.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 118532 119158 . - . ID=gene-AD11_RS18420;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AD11_RS18420;old_locus_tag=AD11_3080 NZ_JJLL01000143.1 Protein Homology CDS 118532 119158 . - 0 ID=cds-WP_033865684.1;Parent=gene-AD11_RS18420;Dbxref=GenBank:WP_033865684.1;Name=WP_033865684.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AD11_RS18420;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_033865684.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 119152 119913 . - . ID=gene-AD11_RS18425;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AD11_RS18425;old_locus_tag=AD11_3081 NZ_JJLL01000143.1 Protein Homology CDS 119152 119913 . - 0 ID=cds-WP_001295182.1;Parent=gene-AD11_RS18425;Dbxref=GenBank:WP_001295182.1;Name=WP_001295182.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AD11_RS18425;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 119894 120943 . - . ID=gene-AD11_RS18430;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AD11_RS18430;old_locus_tag=AD11_3082 NZ_JJLL01000143.1 Protein Homology CDS 119894 120943 . - 0 ID=cds-WP_000568943.1;Parent=gene-AD11_RS18430;Dbxref=GenBank:WP_000568943.1;Name=WP_000568943.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=AD11_RS18430;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568943.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 120940 121419 . - . ID=gene-AD11_RS18435;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AD11_RS18435;old_locus_tag=AD11_3083 NZ_JJLL01000143.1 Protein Homology CDS 120940 121419 . - 0 ID=cds-WP_001219242.1;Parent=gene-AD11_RS18435;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AD11_RS18435;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 121419 122129 . - . ID=gene-AD11_RS18440;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AD11_RS18440;old_locus_tag=AD11_3084 NZ_JJLL01000143.1 Protein Homology CDS 121419 122129 . - 0 ID=cds-WP_000246138.1;Parent=gene-AD11_RS18440;Dbxref=GenBank:WP_000246138.1;Name=WP_000246138.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AD11_RS18440;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 122148 122459 . - . ID=gene-AD11_RS18445;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AD11_RS18445;old_locus_tag=AD11_3085 NZ_JJLL01000143.1 Protein Homology CDS 122148 122459 . - 0 ID=cds-WP_000517476.1;Parent=gene-AD11_RS18445;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AD11_RS18445;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 122653 122976 . - . ID=gene-AD11_RS18450;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AD11_RS18450;old_locus_tag=AD11_3086 NZ_JJLL01000143.1 Protein Homology CDS 122653 122976 . - 0 ID=cds-WP_001246104.1;Parent=gene-AD11_RS18450;Dbxref=GenBank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AD11_RS18450;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 123026 123631 . - . ID=gene-AD11_RS18455;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AD11_RS18455;old_locus_tag=AD11_3087 NZ_JJLL01000143.1 Protein Homology CDS 123026 123631 . - 0 ID=cds-WP_001173673.1;Parent=gene-AD11_RS18455;Dbxref=GenBank:WP_001173673.1;Name=WP_001173673.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AD11_RS18455;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 123631 125058 . - . ID=gene-AD11_RS18460;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AD11_RS18460;old_locus_tag=AD11_3088 NZ_JJLL01000143.1 Protein Homology CDS 123631 125058 . - 0 ID=cds-WP_001090386.1;Parent=gene-AD11_RS18460;Dbxref=GenBank:WP_001090386.1;Name=WP_001090386.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AD11_RS18460;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001090386.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 125060 125968 . - . ID=gene-AD11_RS18465;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AD11_RS18465;old_locus_tag=AD11_3089 NZ_JJLL01000143.1 Protein Homology CDS 125060 125968 . - 0 ID=cds-WP_000372108.1;Parent=gene-AD11_RS18465;Dbxref=GenBank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AD11_RS18465;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11 NZ_JJLL01000143.1 RefSeq gene 126220 127257 . + . ID=gene-AD11_RS18470;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AD11_RS18470;old_locus_tag=AD11_3090 NZ_JJLL01000143.1 Protein Homology CDS 126220 127257 . + 0 ID=cds-WP_000490430.1;Parent=gene-AD11_RS18470;Dbxref=GenBank:WP_000490430.1;Name=WP_000490430.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AD11_RS18470;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490430.1;transl_table=11 NZ_JJLL01000143.1 RefSeq direct_repeat 127339 127672 . + . ID=id-NZ_JJLL01000143.1:127339..127672;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=127339..127367;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_JJLL01000143.1 RefSeq gene 127866 128978 . - . ID=gene-AD11_RS18475;Name=AD11_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18475;old_locus_tag=AD11_3091 NZ_JJLL01000143.1 Protein Homology CDS 127866 128978 . - 0 ID=cds-WP_001300563.1-4;Parent=gene-AD11_RS18475;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS18475;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JJLL01000144.1 1 15766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000144.1 RefSeq region 1 15766 . + . ID=NZ_JJLL01000144.1:1..15766;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000144.1 RefSeq gene 30 1142 . + . ID=gene-AD11_RS18480;Name=AD11_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18480;old_locus_tag=AD11_3092 NZ_JJLL01000144.1 Protein Homology CDS 30 1142 . + 0 ID=cds-WP_001300563.1-5;Parent=gene-AD11_RS18480;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS18480;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 1335 1487 . - . ID=gene-AD11_RS18485;Name=AD11_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18485 NZ_JJLL01000144.1 Protein Homology CDS 1335 1487 . - 0 ID=cds-WP_000956460.1;Parent=gene-AD11_RS18485;Dbxref=GenBank:WP_000956460.1;Name=WP_000956460.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AD11_RS18485;product=Hok/Gef family protein;protein_id=WP_000956460.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 1752 2486 . - . ID=gene-AD11_RS18490;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AD11_RS18490;old_locus_tag=AD11_3093 NZ_JJLL01000144.1 Protein Homology CDS 1752 2486 . - 0 ID=cds-WP_000039863.1;Parent=gene-AD11_RS18490;Dbxref=GenBank:WP_000039863.1;Name=WP_000039863.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311644.1;locus_tag=AD11_RS18490;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039863.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 2560 4272 . - . ID=gene-AD11_RS18495;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AD11_RS18495;old_locus_tag=AD11_3094 NZ_JJLL01000144.1 Protein Homology CDS 2560 4272 . - 0 ID=cds-WP_001290699.1;Parent=gene-AD11_RS18495;Dbxref=GenBank:WP_001290699.1;Name=WP_001290699.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AD11_RS18495;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290699.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 4272 6071 . - . ID=gene-AD11_RS18500;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AD11_RS18500;old_locus_tag=AD11_3095 NZ_JJLL01000144.1 Protein Homology CDS 4272 6071 . - 0 ID=cds-WP_000211907.1;Parent=gene-AD11_RS18500;Dbxref=GenBank:WP_000211907.1;Name=WP_000211907.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AD11_RS18500;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000211907.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 6390 6752 . + . ID=gene-AD11_RS18505;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AD11_RS18505;old_locus_tag=AD11_3097 NZ_JJLL01000144.1 Protein Homology CDS 6390 6752 . + 0 ID=cds-WP_000108294.1;Parent=gene-AD11_RS18505;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AD11_RS18505;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 6830 8101 . + . ID=gene-AD11_RS18510;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AD11_RS18510;old_locus_tag=AD11_3098 NZ_JJLL01000144.1 Protein Homology CDS 6830 8101 . + 0 ID=cds-WP_033865692.1;Parent=gene-AD11_RS18510;Dbxref=GenBank:WP_033865692.1;Name=WP_033865692.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AD11_RS18510;product=FAD-dependent oxidoreductase;protein_id=WP_033865692.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 8092 8352 . + . ID=gene-AD11_RS18515;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AD11_RS18515;old_locus_tag=AD11_3099 NZ_JJLL01000144.1 Protein Homology CDS 8092 8352 . + 0 ID=cds-WP_000109526.1;Parent=gene-AD11_RS18515;Dbxref=GenBank:WP_000109526.1;Name=WP_000109526.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AD11_RS18515;product=ferredoxin family protein;protein_id=WP_000109526.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 8369 8944 . + . ID=gene-AD11_RS18520;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AD11_RS18520;old_locus_tag=AD11_3100 NZ_JJLL01000144.1 Protein Homology CDS 8369 8944 . + 0 ID=cds-WP_001130266.1;Parent=gene-AD11_RS18520;Dbxref=GenBank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AD11_RS18520;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_001130266.1;transl_table=11 NZ_JJLL01000144.1 RefSeq pseudogene 9092 9952 . - . ID=gene-AD11_RS18525;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=pseudogene;locus_tag=AD11_RS18525;pseudo=true NZ_JJLL01000144.1 Protein Homology CDS 9092 9952 . - 0 ID=cds-AD11_RS18525;Parent=gene-AD11_RS18525;Note=internal stop;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AD11_RS18525;product=electron transfer flavoprotein subunit alpha/FixB family protein;pseudo=true;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 9949 10728 . - . ID=gene-AD11_RS18530;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AD11_RS18530;old_locus_tag=AD11_3103 NZ_JJLL01000144.1 Protein Homology CDS 9949 10728 . - 0 ID=cds-WP_001299652.1;Parent=gene-AD11_RS18530;Dbxref=GenBank:WP_001299652.1;Name=WP_001299652.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417250.4;locus_tag=AD11_RS18530;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_001299652.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 10706 12115 . - . ID=gene-AD11_RS18535;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AD11_RS18535;old_locus_tag=AD11_3104 NZ_JJLL01000144.1 Protein Homology CDS 10706 12115 . - 0 ID=cds-WP_001618808.1;Parent=gene-AD11_RS18535;Dbxref=GenBank:WP_001618808.1;Name=WP_001618808.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AD11_RS18535;product=MFS transporter;protein_id=WP_001618808.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 12137 13591 . - . ID=gene-AD11_RS18540;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=AD11_RS18540;old_locus_tag=AD11_3105 NZ_JJLL01000144.1 Protein Homology CDS 12137 13591 . - 0 ID=cds-WP_000059312.1;Parent=gene-AD11_RS18540;Dbxref=GenBank:WP_000059312.1;Name=WP_000059312.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311656.1;locus_tag=AD11_RS18540;product=FAD-binding oxidoreductase;protein_id=WP_000059312.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 13661 14446 . - . ID=gene-AD11_RS18545;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=AD11_RS18545;old_locus_tag=AD11_3106 NZ_JJLL01000144.1 Protein Homology CDS 13661 14446 . - 0 ID=cds-WP_001618810.1;Parent=gene-AD11_RS18545;Dbxref=GenBank:WP_001618810.1;Name=WP_001618810.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311657.2;locus_tag=AD11_RS18545;product=SDR family oxidoreductase;protein_id=WP_001618810.1;transl_table=11 NZ_JJLL01000144.1 RefSeq gene 14594 15756 . - . ID=gene-AD11_RS18550;Name=AD11_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18550;old_locus_tag=AD11_3107 NZ_JJLL01000144.1 Protein Homology CDS 15495 15756 . - 0 ID=cds-WP_103852365.1-7;Parent=gene-AD11_RS18550;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS18550;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 NZ_JJLL01000144.1 Protein Homology CDS 14594 15495 . - 2 ID=cds-WP_103852365.1-7;Parent=gene-AD11_RS18550;Dbxref=GenBank:WP_103852365.1;Name=WP_103852365.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=AD11_RS18550;product=IS3-like element IS3 family transposase;protein_id=WP_103852365.1;transl_table=11 ##sequence-region NZ_JJLL01000145.1 1 5284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000145.1 RefSeq region 1 5284 . + . ID=NZ_JJLL01000145.1:1..5284;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000145.1 RefSeq gene 1 272 . - . ID=gene-AD11_RS18560;Name=AD11_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18560;old_locus_tag=AD11_3109;partial=true;start_range=.,1 NZ_JJLL01000145.1 Protein Homology CDS 1 272 . - 0 ID=cds-WP_033866496.1;Parent=gene-AD11_RS18560;Dbxref=GenBank:WP_033866496.1;Name=WP_033866496.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612087.1;locus_tag=AD11_RS18560;partial=true;product=transposase;protein_id=WP_033866496.1;start_range=.,1;transl_table=11 NZ_JJLL01000145.1 RefSeq gene 541 1818 . + . ID=gene-AD11_RS18565;Name=AD11_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18565;old_locus_tag=AD11_3110 NZ_JJLL01000145.1 Protein Homology CDS 541 1818 . + 0 ID=cds-WP_001164549.1;Parent=gene-AD11_RS18565;Dbxref=GenBank:WP_001164549.1;Name=WP_001164549.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311658.1;locus_tag=AD11_RS18565;product=MFS transporter;protein_id=WP_001164549.1;transl_table=11 NZ_JJLL01000145.1 RefSeq gene 1845 3323 . + . ID=gene-AD11_RS18570;Name=AD11_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18570;old_locus_tag=AD11_3111 NZ_JJLL01000145.1 Protein Homology CDS 1845 3323 . + 0 ID=cds-WP_000039730.1;Parent=gene-AD11_RS18570;Dbxref=GenBank:WP_000039730.1;Name=WP_000039730.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AD11_RS18570;product=FGGY-family carbohydrate kinase;protein_id=WP_000039730.1;transl_table=11 NZ_JJLL01000145.1 RefSeq gene 4143 5255 . - . ID=gene-AD11_RS18575;Name=AD11_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18575;old_locus_tag=AD11_3112 NZ_JJLL01000145.1 Protein Homology CDS 4143 5255 . - 0 ID=cds-WP_001300563.1-6;Parent=gene-AD11_RS18575;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS18575;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JJLL01000146.1 1 3599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000146.1 RefSeq region 1 3599 . + . ID=NZ_JJLL01000146.1:1..3599;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000146.1 RefSeq gene 1 764 . + . ID=gene-AD11_RS18580;Name=AD11_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS18580;old_locus_tag=AD11_3113;partial=true;start_range=.,1 NZ_JJLL01000146.1 Protein Homology CDS 1 764 . + 2 ID=cds-WP_033866433.1-2;Parent=gene-AD11_RS18580;Dbxref=GenBank:WP_033866433.1;Name=WP_033866433.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AD11_RS18580;partial=true;product=IS3 family transposase;protein_id=WP_033866433.1;start_range=.,1;transl_table=11 NZ_JJLL01000146.1 RefSeq gene 1261 1494 . - . ID=gene-AD11_RS18585;Name=papI;gbkey=Gene;gene=papI;gene_biotype=protein_coding;locus_tag=AD11_RS18585;old_locus_tag=AD11_3114 NZ_JJLL01000146.1 Protein Homology CDS 1261 1494 . - 0 ID=cds-WP_000006214.1;Parent=gene-AD11_RS18585;Dbxref=GenBank:WP_000006214.1;Name=WP_000006214.1;gbkey=CDS;gene=papI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006209.1;locus_tag=AD11_RS18585;product=major pilus subunit operon transcriptional regulator PapI;protein_id=WP_000006214.1;transl_table=11 NZ_JJLL01000146.1 RefSeq gene 2048 2212 . + . ID=gene-AD11_RS33225;Name=AD11_RS33225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33225 NZ_JJLL01000146.1 Protein Homology CDS 2048 2212 . + 0 ID=cds-WP_001305388.1;Parent=gene-AD11_RS33225;Dbxref=GenBank:WP_001305388.1;Name=WP_001305388.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015301.6;locus_tag=AD11_RS33225;product=PapB/FocB family fimbrial expression transcriptional regulator;protein_id=WP_001305388.1;transl_table=11 NZ_JJLL01000146.1 RefSeq pseudogene 2420 2988 . + . ID=gene-AD11_RS31715;Name=papA;gbkey=Gene;gene=papA;gene_biotype=pseudogene;locus_tag=AD11_RS31715;pseudo=true NZ_JJLL01000146.1 Protein Homology CDS 2420 2988 . + 0 ID=cds-AD11_RS31715;Parent=gene-AD11_RS31715;Note=frameshifted;gbkey=CDS;gene=papA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001523383.1;locus_tag=AD11_RS31715;product=P fimbria major subunit PapA;pseudo=true;transl_table=11 NZ_JJLL01000146.1 RefSeq pseudogene 3017 3599 . + . ID=gene-AD11_RS18605;Name=AD11_RS18605;end_range=3599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS18605;old_locus_tag=AD11_3117;partial=true;pseudo=true NZ_JJLL01000146.1 Protein Homology CDS 3017 3599 . + 0 ID=cds-AD11_RS18605;Parent=gene-AD11_RS18605;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3599,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS18605;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000147.1 1 242236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000147.1 RefSeq region 1 242236 . + . ID=NZ_JJLL01000147.1:1..242236;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000147.1 RefSeq pseudogene 1 252 . - . ID=gene-AD11_RS18610;Name=AD11_RS18610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS18610;old_locus_tag=AD11_3118;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000147.1 Protein Homology CDS 1 252 . - 0 ID=cds-AD11_RS18610;Parent=gene-AD11_RS18610;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS18610;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000147.1 RefSeq direct_repeat 308 824 . + . ID=id-NZ_JJLL01000147.1:308..824;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=308..336;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_JJLL01000147.1 RefSeq gene 1164 1835 . - . ID=gene-AD11_RS18615;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AD11_RS18615;old_locus_tag=AD11_3120 NZ_JJLL01000147.1 Protein Homology CDS 1164 1835 . - 0 ID=cds-WP_001199973.1;Parent=gene-AD11_RS18615;Dbxref=GenBank:WP_001199973.1;Name=WP_001199973.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AD11_RS18615;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 1974 2114 . + . ID=gene-AD11_RS18620;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=AD11_RS18620;old_locus_tag=AD11_3121 NZ_JJLL01000147.1 Protein Homology CDS 1974 2114 . + 0 ID=cds-WP_001288228.1;Parent=gene-AD11_RS18620;Dbxref=GenBank:WP_001288228.1;Name=WP_001288228.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AD11_RS18620;product=cell envelope stress response protein YqcG;protein_id=WP_001288228.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 2128 3000 . + . ID=gene-AD11_RS18625;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;locus_tag=AD11_RS18625;old_locus_tag=AD11_3122 NZ_JJLL01000147.1 Protein Homology CDS 2128 3000 . + 0 ID=cds-WP_001268460.1;Parent=gene-AD11_RS18625;Dbxref=GenBank:WP_001268460.1;Name=WP_001268460.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ygcG;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AD11_RS18625;product=TPM domain-containing protein;protein_id=WP_001268460.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 3060 4358 . - . ID=gene-AD11_RS18630;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AD11_RS18630;old_locus_tag=AD11_3123 NZ_JJLL01000147.1 Protein Homology CDS 3060 4358 . - 0 ID=cds-WP_000036723.1;Parent=gene-AD11_RS18630;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AD11_RS18630;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 4446 6083 . - . ID=gene-AD11_RS18635;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AD11_RS18635;old_locus_tag=AD11_3124 NZ_JJLL01000147.1 Protein Homology CDS 4446 6083 . - 0 ID=cds-WP_000210878.1;Parent=gene-AD11_RS18635;Dbxref=GenBank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AD11_RS18635;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210878.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 6311 7102 . - . ID=gene-AD11_RS18640;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AD11_RS18640;old_locus_tag=AD11_3125 NZ_JJLL01000147.1 Protein Homology CDS 6311 7102 . - 0 ID=cds-WP_001071648.1;Parent=gene-AD11_RS18640;Dbxref=GenBank:WP_001071648.1;Name=WP_001071648.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AD11_RS18640;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_001071648.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 7173 7508 . - . ID=gene-AD11_RS18645;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AD11_RS18645;old_locus_tag=AD11_3126 NZ_JJLL01000147.1 Protein Homology CDS 7173 7508 . - 0 ID=cds-WP_000254738.1;Parent=gene-AD11_RS18645;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AD11_RS18645;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 7508 7756 . - . ID=gene-AD11_RS18650;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AD11_RS18650;old_locus_tag=AD11_3127 NZ_JJLL01000147.1 Protein Homology CDS 7508 7756 . - 0 ID=cds-WP_000581941.1;Parent=gene-AD11_RS18650;Dbxref=GenBank:WP_000581941.1;Name=WP_000581941.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AD11_RS18650;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581941.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 7834 10068 . - . ID=gene-AD11_RS18655;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AD11_RS18655;old_locus_tag=AD11_3128 NZ_JJLL01000147.1 Protein Homology CDS 7834 10068 . - 0 ID=cds-WP_000226815.1;Parent=gene-AD11_RS18655;Dbxref=GenBank:WP_000226815.1;Name=WP_000226815.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AD11_RS18655;product=GTP diphosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 10116 11417 . - . ID=gene-AD11_RS18660;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AD11_RS18660;old_locus_tag=AD11_3129 NZ_JJLL01000147.1 Protein Homology CDS 10116 11417 . - 0 ID=cds-WP_000046812.1;Parent=gene-AD11_RS18660;Dbxref=GenBank:WP_000046812.1;Name=WP_000046812.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AD11_RS18660;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 11474 14230 . + . ID=gene-AD11_RS18665;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AD11_RS18665;old_locus_tag=AD11_3130 NZ_JJLL01000147.1 Protein Homology CDS 11474 14230 . + 0 ID=cds-WP_000186450.1;Parent=gene-AD11_RS18665;Dbxref=GenBank:WP_000186450.1;Name=WP_000186450.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AD11_RS18665;product=two-component sensor histidine kinase BarA;protein_id=WP_000186450.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 14462 15802 . - . ID=gene-AD11_RS18670;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AD11_RS18670;old_locus_tag=AD11_3132 NZ_JJLL01000147.1 Protein Homology CDS 14462 15802 . - 0 ID=cds-WP_000098255.1;Parent=gene-AD11_RS18670;Dbxref=GenBank:WP_000098255.1;Name=WP_000098255.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AD11_RS18670;product=glucarate dehydratase;protein_id=WP_000098255.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 15823 17163 . - . ID=gene-AD11_RS18675;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=AD11_RS18675;old_locus_tag=AD11_3133 NZ_JJLL01000147.1 Protein Homology CDS 15823 17163 . - 0 ID=cds-WP_000235391.1;Parent=gene-AD11_RS18675;Dbxref=GenBank:WP_000235391.1;Name=WP_000235391.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417268.1;locus_tag=AD11_RS18675;product=enolase C-terminal domain-like protein;protein_id=WP_000235391.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 17165 18517 . - . ID=gene-AD11_RS18680;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AD11_RS18680;old_locus_tag=AD11_3134 NZ_JJLL01000147.1 Protein Homology CDS 17165 18517 . - 0 ID=cds-WP_000097082.1;Parent=gene-AD11_RS18680;Dbxref=GenBank:WP_000097082.1;Name=WP_000097082.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AD11_RS18680;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097082.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 18952 19401 . - . ID=gene-AD11_RS18685;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=AD11_RS18685;old_locus_tag=AD11_3137 NZ_JJLL01000147.1 Protein Homology CDS 18952 19401 . - 0 ID=cds-WP_000807751.1;Parent=gene-AD11_RS18685;Dbxref=GenBank:WP_000807751.1;Name=WP_000807751.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AD11_RS18685;product=flavodoxin;protein_id=WP_000807751.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 19419 20201 . - . ID=gene-AD11_RS18690;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AD11_RS18690;old_locus_tag=AD11_3138 NZ_JJLL01000147.1 Protein Homology CDS 19419 20201 . - 0 ID=cds-WP_000890001.1;Parent=gene-AD11_RS18690;Dbxref=GenBank:WP_000890001.1;Name=WP_000890001.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AD11_RS18690;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890001.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 20201 20530 . - . ID=gene-AD11_RS18695;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=AD11_RS18695;old_locus_tag=AD11_3139 NZ_JJLL01000147.1 Protein Homology CDS 20201 20530 . - 0 ID=cds-WP_000206990.1;Parent=gene-AD11_RS18695;Dbxref=GenBank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;gene=yqcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=AD11_RS18695;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 21152 21697 . - . ID=gene-AD11_RS18705;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AD11_RS18705;old_locus_tag=AD11_3140 NZ_JJLL01000147.1 Protein Homology CDS 21152 21697 . - 0 ID=cds-WP_001618813.1;Parent=gene-AD11_RS18705;Dbxref=GenBank:WP_001618813.1;Name=WP_001618813.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AD11_RS18705;product=SecY-interacting protein;protein_id=WP_001618813.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 21765 22613 . + . ID=gene-AD11_RS18710;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AD11_RS18710;old_locus_tag=AD11_3141 NZ_JJLL01000147.1 Protein Homology CDS 21765 22613 . + 0 ID=cds-WP_000100421.1;Parent=gene-AD11_RS18710;Dbxref=GenBank:WP_000100421.1;Name=WP_000100421.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417274.1;locus_tag=AD11_RS18710;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100421.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 22725 24089 . + . ID=gene-AD11_RS18715;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AD11_RS18715;old_locus_tag=AD11_3142 NZ_JJLL01000147.1 Protein Homology CDS 22725 24089 . + 0 ID=cds-WP_000627995.1;Parent=gene-AD11_RS18715;Dbxref=GenBank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AD11_RS18715;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627995.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 24646 25935 . + . ID=gene-AD11_RS18720;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AD11_RS18720;old_locus_tag=AD11_3143 NZ_JJLL01000147.1 Protein Homology CDS 24646 25935 . + 0 ID=cds-WP_000450476.1;Parent=gene-AD11_RS18720;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AD11_RS18720;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 25993 27360 . + . ID=gene-AD11_RS18725;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AD11_RS18725;old_locus_tag=AD11_3144 NZ_JJLL01000147.1 Protein Homology CDS 25993 27360 . + 0 ID=cds-WP_000626368.1;Parent=gene-AD11_RS18725;Dbxref=GenBank:WP_000626368.1;Name=WP_000626368.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708592.1;locus_tag=AD11_RS18725;product=L-serine ammonia-lyase II;protein_id=WP_000626368.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 27472 28227 . + . ID=gene-AD11_RS18730;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AD11_RS18730;old_locus_tag=AD11_3145 NZ_JJLL01000147.1 Protein Homology CDS 27472 28227 . + 0 ID=cds-WP_000268232.1;Parent=gene-AD11_RS18730;Dbxref=GenBank:WP_000268232.1;Name=WP_000268232.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AD11_RS18730;product=flap endonuclease Xni;protein_id=WP_000268232.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 28282 29430 . - . ID=gene-AD11_RS18735;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AD11_RS18735;old_locus_tag=AD11_3146 NZ_JJLL01000147.1 Protein Homology CDS 28282 29430 . - 0 ID=cds-WP_000013588.1;Parent=gene-AD11_RS18735;Dbxref=GenBank:WP_000013588.1;Name=WP_000013588.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AD11_RS18735;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 29458 30105 . - . ID=gene-AD11_RS18740;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AD11_RS18740;old_locus_tag=AD11_3147 NZ_JJLL01000147.1 Protein Homology CDS 29458 30105 . - 0 ID=cds-WP_000440781.1;Parent=gene-AD11_RS18740;Dbxref=GenBank:WP_000440781.1;Name=WP_000440781.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417280.1;locus_tag=AD11_RS18740;product=L-fuculose-phosphate aldolase;protein_id=WP_000440781.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 30652 31968 . + . ID=gene-AD11_RS18745;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AD11_RS18745;old_locus_tag=AD11_3148 NZ_JJLL01000147.1 Protein Homology CDS 30652 31968 . + 0 ID=cds-WP_000528603.1;Parent=gene-AD11_RS18745;Dbxref=GenBank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AD11_RS18745;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 32001 33776 . + . ID=gene-AD11_RS18750;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AD11_RS18750;old_locus_tag=AD11_3149 NZ_JJLL01000147.1 Protein Homology CDS 32001 33776 . + 0 ID=cds-WP_000724176.1;Parent=gene-AD11_RS18750;Dbxref=GenBank:WP_000724176.1;Name=WP_000724176.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AD11_RS18750;product=L-fucose isomerase;protein_id=WP_000724176.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 33885 35303 . + . ID=gene-AD11_RS18755;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AD11_RS18755;old_locus_tag=AD11_3150 NZ_JJLL01000147.1 Protein Homology CDS 33885 35303 . + 0 ID=cds-WP_000808378.1;Parent=gene-AD11_RS18755;Dbxref=GenBank:WP_000808378.1;Name=WP_000808378.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AD11_RS18755;product=L-fuculokinase;protein_id=WP_000808378.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 35305 35727 . + . ID=gene-AD11_RS18760;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AD11_RS18760;old_locus_tag=AD11_3151 NZ_JJLL01000147.1 Protein Homology CDS 35305 35727 . + 0 ID=cds-WP_000920840.1;Parent=gene-AD11_RS18760;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AD11_RS18760;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 35785 36516 . + . ID=gene-AD11_RS18765;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AD11_RS18765;old_locus_tag=AD11_3152 NZ_JJLL01000147.1 Protein Homology CDS 35785 36516 . + 0 ID=cds-WP_000642343.1;Parent=gene-AD11_RS18765;Dbxref=GenBank:WP_000642343.1;Name=WP_000642343.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AD11_RS18765;product=L-fucose operon activator;protein_id=WP_000642343.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 36560 37660 . - . ID=gene-AD11_RS18770;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AD11_RS18770;old_locus_tag=AD11_3153 NZ_JJLL01000147.1 Protein Homology CDS 36560 37660 . - 0 ID=cds-WP_001045520.1;Parent=gene-AD11_RS18770;Dbxref=GenBank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AD11_RS18770;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 37653 38048 . - . ID=gene-AD11_RS18775;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AD11_RS18775;old_locus_tag=AD11_3154 NZ_JJLL01000147.1 Protein Homology CDS 37653 38048 . - 0 ID=cds-WP_000203905.1;Parent=gene-AD11_RS18775;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AD11_RS18775;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 38067 38984 . - . ID=gene-AD11_RS18780;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AD11_RS18780;old_locus_tag=AD11_3155 NZ_JJLL01000147.1 Protein Homology CDS 38067 38984 . - 0 ID=cds-WP_000044401.1;Parent=gene-AD11_RS18780;Dbxref=GenBank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AD11_RS18780;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 39335 39562 . - . ID=gene-AD11_RS18785;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AD11_RS18785;old_locus_tag=AD11_3156 NZ_JJLL01000147.1 Protein Homology CDS 39335 39562 . - 0 ID=cds-WP_000750398.1;Parent=gene-AD11_RS18785;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AD11_RS18785;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 39754 40959 . + . ID=gene-AD11_RS18790;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AD11_RS18790;old_locus_tag=AD11_3157 NZ_JJLL01000147.1 Protein Homology CDS 39754 40959 . + 0 ID=cds-WP_001300698.1;Parent=gene-AD11_RS18790;Dbxref=GenBank:WP_001300698.1;Name=WP_001300698.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AD11_RS18790;product=cysteine desulfurase CsdA;protein_id=WP_001300698.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 40959 41402 . + . ID=gene-AD11_RS18795;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AD11_RS18795;old_locus_tag=AD11_3158 NZ_JJLL01000147.1 Protein Homology CDS 40959 41402 . + 0 ID=cds-WP_000184261.1;Parent=gene-AD11_RS18795;Dbxref=GenBank:WP_000184261.1;Name=WP_000184261.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AD11_RS18795;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184261.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 41453 42259 . - . ID=gene-AD11_RS18800;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AD11_RS18800;old_locus_tag=AD11_3159 NZ_JJLL01000147.1 Protein Homology CDS 41453 42259 . - 0 ID=cds-WP_000117728.1;Parent=gene-AD11_RS18800;Dbxref=GenBank:WP_000117728.1;Name=WP_000117728.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417292.1;locus_tag=AD11_RS18800;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117728.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 42498 43595 . - . ID=gene-AD11_RS18805;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AD11_RS18805;old_locus_tag=AD11_3160 NZ_JJLL01000147.1 Protein Homology CDS 42498 43595 . - 0 ID=cds-WP_000678646.1;Parent=gene-AD11_RS18805;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AD11_RS18805;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 43804 43880 . + . ID=gene-AD11_RS18810;Name=AD11_RS18810;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS18810;old_locus_tag=AD11_3161 NZ_JJLL01000147.1 tRNAscan-SE tRNA 43804 43880 . + . ID=rna-AD11_RS18810;Parent=gene-AD11_RS18810;anticodon=(pos:43838..43840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18810;product=tRNA-Met NZ_JJLL01000147.1 tRNAscan-SE exon 43804 43880 . + . ID=exon-AD11_RS18810-1;Parent=rna-AD11_RS18810;anticodon=(pos:43838..43840);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18810;product=tRNA-Met NZ_JJLL01000147.1 RefSeq gene 43914 43990 . + . ID=gene-AD11_RS18815;Name=AD11_RS18815;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS18815;old_locus_tag=AD11_3162 NZ_JJLL01000147.1 tRNAscan-SE tRNA 43914 43990 . + . ID=rna-AD11_RS18815;Parent=gene-AD11_RS18815;anticodon=(pos:43948..43950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18815;product=tRNA-Met NZ_JJLL01000147.1 tRNAscan-SE exon 43914 43990 . + . ID=exon-AD11_RS18815-1;Parent=rna-AD11_RS18815;anticodon=(pos:43948..43950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18815;product=tRNA-Met NZ_JJLL01000147.1 RefSeq gene 44024 44100 . + . ID=gene-AD11_RS18820;Name=AD11_RS18820;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS18820;old_locus_tag=AD11_3163 NZ_JJLL01000147.1 tRNAscan-SE tRNA 44024 44100 . + . ID=rna-AD11_RS18820;Parent=gene-AD11_RS18820;anticodon=(pos:44058..44060);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18820;product=tRNA-Met NZ_JJLL01000147.1 tRNAscan-SE exon 44024 44100 . + . ID=exon-AD11_RS18820-1;Parent=rna-AD11_RS18820;anticodon=(pos:44058..44060);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS18820;product=tRNA-Met NZ_JJLL01000147.1 RefSeq gene 44174 45427 . - . ID=gene-AD11_RS18825;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AD11_RS18825;old_locus_tag=AD11_3164 NZ_JJLL01000147.1 Protein Homology CDS 44174 45427 . - 0 ID=cds-WP_000016907.1;Parent=gene-AD11_RS18825;Dbxref=GenBank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AD11_RS18825;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 45659 46990 . + . ID=gene-AD11_RS18830;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AD11_RS18830;old_locus_tag=AD11_3165 NZ_JJLL01000147.1 Protein Homology CDS 45659 46990 . + 0 ID=cds-WP_000237947.1;Parent=gene-AD11_RS18830;Dbxref=GenBank:WP_000237947.1;Name=WP_000237947.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AD11_RS18830;product=amino-acid N-acetyltransferase;protein_id=WP_000237947.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 47052 48878 . - . ID=gene-AD11_RS18835;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AD11_RS18835;old_locus_tag=AD11_3166 NZ_JJLL01000147.1 Protein Homology CDS 47052 48878 . - 0 ID=cds-WP_000775931.1;Parent=gene-AD11_RS18835;Dbxref=GenBank:WP_000775931.1;Name=WP_000775931.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AD11_RS18835;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775931.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 48878 52420 . - . ID=gene-AD11_RS18840;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AD11_RS18840;old_locus_tag=AD11_3167 NZ_JJLL01000147.1 Protein Homology CDS 48878 52420 . - 0 ID=cds-WP_033865709.1;Parent=gene-AD11_RS18840;Dbxref=GenBank:WP_033865709.1;Name=WP_033865709.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=AD11_RS18840;product=exodeoxyribonuclease V subunit beta;protein_id=WP_033865709.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 52413 55301 . - . ID=gene-AD11_RS18845;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AD11_RS18845;old_locus_tag=AD11_3168 NZ_JJLL01000147.1 Protein Homology CDS 52413 55301 . - 0 ID=cds-WP_001138150.1;Parent=gene-AD11_RS18845;Dbxref=GenBank:WP_001138150.1;Name=WP_001138150.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=AD11_RS18845;product=pitrilysin;protein_id=WP_001138150.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 55477 58845 . - . ID=gene-AD11_RS18850;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AD11_RS18850;old_locus_tag=AD11_3169 NZ_JJLL01000147.1 Protein Homology CDS 55477 58845 . - 0 ID=cds-WP_000946947.1;Parent=gene-AD11_RS18850;Dbxref=GenBank:WP_000946947.1;Name=WP_000946947.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AD11_RS18850;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946947.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 58858 59181 . - . ID=gene-AD11_RS18855;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AD11_RS18855;old_locus_tag=AD11_3170 NZ_JJLL01000147.1 Protein Homology CDS 58858 59181 . - 0 ID=cds-WP_001276460.1;Parent=gene-AD11_RS18855;Dbxref=GenBank:WP_001276460.1;Name=WP_001276460.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AD11_RS18855;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276460.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 59166 59573 . - . ID=gene-AD11_RS18860;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=AD11_RS18860;old_locus_tag=AD11_3171 NZ_JJLL01000147.1 Protein Homology CDS 59166 59573 . - 0 ID=cds-WP_001078380.1;Parent=gene-AD11_RS18860;Dbxref=GenBank:WP_001078380.1;Name=WP_001078380.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AD11_RS18860;product=DUF2509 family protein;protein_id=WP_001078380.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 59570 60133 . - . ID=gene-AD11_RS18865;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AD11_RS18865;old_locus_tag=AD11_3172 NZ_JJLL01000147.1 Protein Homology CDS 59570 60133 . - 0 ID=cds-WP_001144315.1;Parent=gene-AD11_RS18865;Dbxref=GenBank:WP_001144315.1;Name=WP_001144315.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417302.1;locus_tag=AD11_RS18865;product=prepilin peptidase-dependent protein;protein_id=WP_001144315.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 60124 60594 . - . ID=gene-AD11_RS18870;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AD11_RS18870;old_locus_tag=AD11_3173 NZ_JJLL01000147.1 Protein Homology CDS 60124 60594 . - 0 ID=cds-WP_000857051.1;Parent=gene-AD11_RS18870;Dbxref=GenBank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AD11_RS18870;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 60778 61572 . - . ID=gene-AD11_RS18875;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AD11_RS18875;old_locus_tag=AD11_3175 NZ_JJLL01000147.1 Protein Homology CDS 60778 61572 . - 0 ID=cds-WP_000816232.1;Parent=gene-AD11_RS18875;Dbxref=GenBank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AD11_RS18875;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 61579 62454 . - . ID=gene-AD11_RS18880;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AD11_RS18880;old_locus_tag=AD11_3176 NZ_JJLL01000147.1 Protein Homology CDS 61579 62454 . - 0 ID=cds-WP_000204658.1;Parent=gene-AD11_RS18880;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AD11_RS18880;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 62605 64851 . - . ID=gene-AD11_RS18885;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD11_RS18885;old_locus_tag=AD11_3177 NZ_JJLL01000147.1 Protein Homology CDS 62605 64851 . - 0 ID=cds-WP_000957910.1;Parent=gene-AD11_RS18885;Dbxref=GenBank:WP_000957910.1;Name=WP_000957910.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417306.1;locus_tag=AD11_RS18885;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957910.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 64864 65394 . - . ID=gene-AD11_RS18890;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AD11_RS18890;old_locus_tag=AD11_3178 NZ_JJLL01000147.1 Protein Homology CDS 64864 65394 . - 0 ID=cds-WP_000564489.1;Parent=gene-AD11_RS18890;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AD11_RS18890;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 65747 65893 . - . ID=gene-AD11_RS32920;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AD11_RS32920 NZ_JJLL01000147.1 Protein Homology CDS 65747 65893 . - 0 ID=cds-WP_000953278.1;Parent=gene-AD11_RS32920;Dbxref=GenBank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AD11_RS32920;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 66079 66768 . + . ID=gene-AD11_RS18905;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AD11_RS18905;old_locus_tag=AD11_3180 NZ_JJLL01000147.1 Protein Homology CDS 66079 66768 . + 0 ID=cds-WP_000082201.1;Parent=gene-AD11_RS18905;Dbxref=GenBank:WP_000082201.1;Name=WP_000082201.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417308.1;locus_tag=AD11_RS18905;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082201.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 66837 67550 . + . ID=gene-AD11_RS18910;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AD11_RS18910;old_locus_tag=AD11_3181 NZ_JJLL01000147.1 Protein Homology CDS 66837 67550 . + 0 ID=cds-WP_000895624.1;Parent=gene-AD11_RS18910;Dbxref=GenBank:WP_000895624.1;Name=WP_000895624.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AD11_RS18910;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 67688 67906 . + . ID=gene-AD11_RS18915;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AD11_RS18915;old_locus_tag=AD11_3182 NZ_JJLL01000147.1 Protein Homology CDS 67688 67906 . + 0 ID=cds-WP_000758655.1;Parent=gene-AD11_RS18915;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AD11_RS18915;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 68014 69054 . + . ID=gene-AD11_RS18920;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AD11_RS18920;old_locus_tag=AD11_3183 NZ_JJLL01000147.1 Protein Homology CDS 68014 69054 . + 0 ID=cds-WP_001199295.1;Parent=gene-AD11_RS18920;Dbxref=GenBank:WP_001199295.1;Name=WP_001199295.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AD11_RS18920;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_001199295.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 69086 70279 . - . ID=gene-AD11_RS18925;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AD11_RS18925;old_locus_tag=AD11_3184 NZ_JJLL01000147.1 Protein Homology CDS 69086 70279 . - 0 ID=cds-WP_000004616.1;Parent=gene-AD11_RS18925;Dbxref=GenBank:WP_000004616.1;Name=WP_000004616.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AD11_RS18925;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 70272 72431 . - . ID=gene-AD11_RS18930;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AD11_RS18930;old_locus_tag=AD11_3185 NZ_JJLL01000147.1 Protein Homology CDS 70272 72431 . - 0 ID=cds-WP_000899054.1;Parent=gene-AD11_RS18930;Dbxref=GenBank:WP_000899054.1;Name=WP_000899054.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AD11_RS18930;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899054.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 73016 74047 . + . ID=gene-AD11_RS18935;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AD11_RS18935;old_locus_tag=AD11_3187 NZ_JJLL01000147.1 Protein Homology CDS 73016 74047 . + 0 ID=cds-WP_032083843.1;Parent=gene-AD11_RS18935;Dbxref=GenBank:WP_032083843.1;Name=WP_032083843.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AD11_RS18935;product=HTH-type transcriptional regulator GalR;protein_id=WP_032083843.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 74054 75316 . - . ID=gene-AD11_RS18940;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AD11_RS18940;old_locus_tag=AD11_3188 NZ_JJLL01000147.1 Protein Homology CDS 74054 75316 . - 0 ID=cds-WP_001120711.1;Parent=gene-AD11_RS18940;Dbxref=GenBank:WP_001120711.1;Name=WP_001120711.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AD11_RS18940;product=diaminopimelate decarboxylase;protein_id=WP_001120711.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 75438 76373 . + . ID=gene-AD11_RS18945;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AD11_RS18945;old_locus_tag=AD11_3189 NZ_JJLL01000147.1 Protein Homology CDS 75438 76373 . + 0 ID=cds-WP_000741828.1;Parent=gene-AD11_RS18945;Dbxref=GenBank:WP_000741828.1;Name=WP_000741828.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417316.1;locus_tag=AD11_RS18945;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741828.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 76360 77052 . - . ID=gene-AD11_RS18950;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AD11_RS18950;old_locus_tag=AD11_3190 NZ_JJLL01000147.1 Protein Homology CDS 76360 77052 . - 0 ID=cds-WP_000848664.1;Parent=gene-AD11_RS18950;Dbxref=GenBank:WP_000848664.1;Name=WP_000848664.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AD11_RS18950;product=amino acid racemase;protein_id=WP_000848664.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 77181 78599 . - . ID=gene-AD11_RS18955;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AD11_RS18955;old_locus_tag=AD11_3191 NZ_JJLL01000147.1 Protein Homology CDS 77181 78599 . - 0 ID=cds-WP_000256438.1;Parent=gene-AD11_RS18955;Dbxref=GenBank:WP_000256438.1;Name=WP_000256438.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AD11_RS18955;product=arabinose-proton symporter AraE;protein_id=WP_000256438.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 78914 79675 . - . ID=gene-AD11_RS18960;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AD11_RS18960;old_locus_tag=AD11_3192 NZ_JJLL01000147.1 Protein Homology CDS 78914 79675 . - 0 ID=cds-WP_000603502.1;Parent=gene-AD11_RS18960;Dbxref=GenBank:WP_000603502.1;Name=WP_000603502.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417319.1;locus_tag=AD11_RS18960;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603502.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 79705 80541 . - . ID=gene-AD11_RS18965;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AD11_RS18965;old_locus_tag=AD11_3193 NZ_JJLL01000147.1 Protein Homology CDS 79705 80541 . - 0 ID=cds-WP_000383237.1;Parent=gene-AD11_RS18965;Dbxref=GenBank:WP_000383237.1;Name=WP_000383237.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AD11_RS18965;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383237.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 80828 82009 . - . ID=gene-AD11_RS18970;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=AD11_RS18970;old_locus_tag=AD11_3194 NZ_JJLL01000147.1 Protein Homology CDS 80828 82009 . - 0 ID=cds-WP_033866502.1;Parent=gene-AD11_RS18970;Dbxref=GenBank:WP_033866502.1;Name=WP_033866502.1;Ontology_term=GO:0003985;gbkey=CDS;gene=yqeF;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=AD11_RS18970;product=acetyl-CoA C-acetyltransferase;protein_id=WP_033866502.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 82264 83493 . + . ID=gene-AD11_RS18975;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=AD11_RS18975;old_locus_tag=AD11_3195 NZ_JJLL01000147.1 Protein Homology CDS 82264 83493 . + 0 ID=cds-WP_000065950.1;Parent=gene-AD11_RS18975;Dbxref=GenBank:WP_000065950.1;Name=WP_000065950.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=yqeG;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AD11_RS18975;product=amino acid permease;protein_id=WP_000065950.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 83953 84586 . + . ID=gene-AD11_RS18980;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=pseudogene;locus_tag=AD11_RS18980;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 83953 84586 . + 0 ID=cds-AD11_RS18980;Parent=gene-AD11_RS18980;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yqeH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AD11_RS18980;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 84920 85729 . + . ID=gene-AD11_RS18985;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;locus_tag=AD11_RS18985;old_locus_tag=AD11_3199 NZ_JJLL01000147.1 Protein Homology CDS 84920 85729 . + 0 ID=cds-WP_001300710.1;Parent=gene-AD11_RS18985;Dbxref=GenBank:WP_001300710.1;Name=WP_001300710.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yqeI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=AD11_RS18985;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001300710.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 85722 86204 . + . ID=gene-AD11_RS18990;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=protein_coding;locus_tag=AD11_RS18990;old_locus_tag=AD11_3200 NZ_JJLL01000147.1 Protein Homology CDS 85722 86204 . + 0 ID=cds-WP_000568339.1;Parent=gene-AD11_RS18990;Dbxref=GenBank:WP_000568339.1;Name=WP_000568339.1;gbkey=CDS;gene=yqeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=AD11_RS18990;product=protein YqeJ;protein_id=WP_000568339.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 86237 86317 . - . ID=gene-AD11_RS30950;Name=AD11_RS30950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS30950 NZ_JJLL01000147.1 Protein Homology CDS 86237 86317 . - 0 ID=cds-WP_000655820.1;Parent=gene-AD11_RS30950;Dbxref=GenBank:WP_000655820.1;Name=WP_000655820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=AD11_RS30950;product=hypothetical protein;protein_id=WP_000655820.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 86353 86778 . - . ID=gene-AD11_RS18995;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=AD11_RS18995 NZ_JJLL01000147.1 Protein Homology CDS 86353 86778 . - 0 ID=cds-WP_001356275.1;Parent=gene-AD11_RS18995;Dbxref=GenBank:WP_001356275.1;Name=WP_001356275.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=AD11_RS18995;product=protein YqeK;protein_id=WP_001356275.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 87208 87697 . + . ID=gene-AD11_RS19010;Name=AD11_RS19010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19010;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 87208 87697 . + 0 ID=cds-AD11_RS19010;Parent=gene-AD11_RS19010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311734.1;locus_tag=AD11_RS19010;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 87922 88413 . + . ID=gene-AD11_RS19015;Name=ygeG;gbkey=Gene;gene=ygeG;gene_biotype=protein_coding;locus_tag=AD11_RS19015;old_locus_tag=AD11_3203 NZ_JJLL01000147.1 Protein Homology CDS 87922 88413 . + 0 ID=cds-WP_000102780.1;Parent=gene-AD11_RS19015;Dbxref=GenBank:WP_000102780.1;Name=WP_000102780.1;gbkey=CDS;gene=ygeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=AD11_RS19015;product=tetratricopeptide repeat protein;protein_id=WP_000102780.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 88748 90124 . + . ID=gene-AD11_RS19020;Name=ygeH;gbkey=Gene;gene=ygeH;gene_biotype=protein_coding;locus_tag=AD11_RS19020;old_locus_tag=AD11_3204 NZ_JJLL01000147.1 Protein Homology CDS 88748 90124 . + 0 ID=cds-WP_001618817.1;Parent=gene-AD11_RS19020;Dbxref=GenBank:WP_001618817.1;Name=WP_001618817.1;gbkey=CDS;gene=ygeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417329.1;locus_tag=AD11_RS19020;product=HilA family transcriptional regulator YgeH;protein_id=WP_001618817.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 90292 90510 . + . ID=gene-AD11_RS19025;Name=ygeI;gbkey=Gene;gene=ygeI;gene_biotype=protein_coding;locus_tag=AD11_RS19025;old_locus_tag=AD11_3205 NZ_JJLL01000147.1 Protein Homology CDS 90292 90510 . + 0 ID=cds-WP_000184092.1;Parent=gene-AD11_RS19025;Dbxref=GenBank:WP_000184092.1;Name=WP_000184092.1;gbkey=CDS;gene=ygeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417330.1;locus_tag=AD11_RS19025;product=protein YgeI;protein_id=WP_000184092.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 90593 91094 . + . ID=gene-AD11_RS19030;Name=AD11_RS19030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19030;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 90593 91094 . + 0 ID=cds-AD11_RS19030;Parent=gene-AD11_RS19030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843029.1;locus_tag=AD11_RS19030;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 91113 91745 . - . ID=gene-AD11_RS19035;Name=AD11_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19035;old_locus_tag=AD11_3207 NZ_JJLL01000147.1 Protein Homology CDS 91113 91745 . - 0 ID=cds-WP_000516289.1;Parent=gene-AD11_RS19035;Dbxref=GenBank:WP_000516289.1;Name=WP_000516289.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311739.1;locus_tag=AD11_RS19035;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_000516289.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 91964 92395 . - . ID=gene-AD11_RS32235;Name=AD11_RS32235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32235;old_locus_tag=AD11_3208 NZ_JJLL01000147.1 Protein Homology CDS 91964 92395 . - 0 ID=cds-WP_033865715.1;Parent=gene-AD11_RS32235;Dbxref=GenBank:WP_033865715.1;Name=WP_033865715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001701978.1;locus_tag=AD11_RS32235;product=hypothetical protein;protein_id=WP_033865715.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 92398 92592 . - . ID=gene-AD11_RS19045;Name=AD11_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19045;old_locus_tag=AD11_3209 NZ_JJLL01000147.1 Protein Homology CDS 92398 92592 . - 0 ID=cds-WP_001352163.1;Parent=gene-AD11_RS19045;Dbxref=GenBank:WP_001352163.1;Name=WP_001352163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001352163.1;locus_tag=AD11_RS19045;product=hypothetical protein;protein_id=WP_001352163.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 92610 93191 . - . ID=gene-AD11_RS29660;Name=AD11_RS29660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS29660;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 92610 93191 . - 0 ID=cds-AD11_RS29660;Parent=gene-AD11_RS29660;Note=internal stop;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311742.1;locus_tag=AD11_RS29660;product=type III secretion apparatus protein OrgA/MxiK;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 93207 93941 . - . ID=gene-AD11_RS19055;Name=AD11_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19055;old_locus_tag=AD11_3211 NZ_JJLL01000147.1 Protein Homology CDS 93207 93941 . - 0 ID=cds-WP_000875251.1;Parent=gene-AD11_RS19055;Dbxref=GenBank:WP_000875251.1;Name=WP_000875251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311743.1;locus_tag=AD11_RS19055;product=EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein;protein_id=WP_000875251.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 93938 94270 . - . ID=gene-AD11_RS19060;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=AD11_RS19060;old_locus_tag=AD11_3212 NZ_JJLL01000147.1 Protein Homology CDS 93938 94270 . - 0 ID=cds-WP_000116717.1;Parent=gene-AD11_RS19060;Dbxref=GenBank:WP_000116717.1;Name=WP_000116717.1;gbkey=CDS;gene=sctI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311744.1;locus_tag=AD11_RS19060;product=type III secretion system inner rod subunit SctI;protein_id=WP_000116717.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 94290 94529 . - . ID=gene-AD11_RS19065;Name=AD11_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19065;old_locus_tag=AD11_3213 NZ_JJLL01000147.1 Protein Homology CDS 94290 94529 . - 0 ID=cds-WP_000796273.1;Parent=gene-AD11_RS19065;Dbxref=GenBank:WP_000796273.1;Name=WP_000796273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311745.1;locus_tag=AD11_RS19065;product=type III secretion system needle complex protein;protein_id=WP_000796273.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 94543 95723 . - . ID=gene-AD11_RS32120;Name=AD11_RS32120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32120;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 94543 95723 . - 0 ID=cds-AD11_RS32120;Parent=gene-AD11_RS32120;Note=frameshifted;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365813.1;locus_tag=AD11_RS32120;product=PrgH/EprH family type III secretion apparatus protein;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 95980 96480 . + . ID=gene-AD11_RS19075;Name=AD11_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19075;old_locus_tag=AD11_3215 NZ_JJLL01000147.1 Protein Homology CDS 95980 96480 . + 0 ID=cds-WP_001195873.1;Parent=gene-AD11_RS19075;Dbxref=GenBank:WP_001195873.1;Name=WP_001195873.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311747.1;locus_tag=AD11_RS19075;product=helix-turn-helix transcriptional regulator;protein_id=WP_001195873.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 96482 96757 . + . ID=gene-AD11_RS19080;Name=AD11_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19080 NZ_JJLL01000147.1 Protein Homology CDS 96482 96757 . + 0 ID=cds-WP_000060551.1;Parent=gene-AD11_RS19080;Dbxref=GenBank:WP_000060551.1;Name=WP_000060551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000060551.1;locus_tag=AD11_RS19080;product=hypothetical protein;protein_id=WP_000060551.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 96837 97956 . - . ID=gene-AD11_RS19090;Name=AD11_RS19090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19090;old_locus_tag=AD11_3217;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 96837 97956 . - 0 ID=cds-AD11_RS19090;Parent=gene-AD11_RS19090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311748.1;locus_tag=AD11_RS19090;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 97965 98732 . - . ID=gene-AD11_RS19095;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=AD11_RS19095;old_locus_tag=AD11_3218 NZ_JJLL01000147.1 Protein Homology CDS 97965 98732 . - 0 ID=cds-WP_000503297.1;Parent=gene-AD11_RS19095;Dbxref=GenBank:WP_000503297.1;Name=WP_000503297.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:TIGR01401.1;locus_tag=AD11_RS19095;product=type III secretion system export apparatus subunit SctT;protein_id=WP_000503297.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 98734 98994 . - . ID=gene-AD11_RS19100;Name=AD11_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19100;old_locus_tag=AD11_3219 NZ_JJLL01000147.1 Protein Homology CDS 98734 98994 . - 0 ID=cds-WP_000341004.1;Parent=gene-AD11_RS19100;Dbxref=GenBank:WP_000341004.1;Name=WP_000341004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=AD11_RS19100;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_000341004.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 99004 99669 . - . ID=gene-AD11_RS19105;Name=AD11_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19105;old_locus_tag=AD11_3220 NZ_JJLL01000147.1 Protein Homology CDS 99004 99669 . - 0 ID=cds-WP_000071554.1;Parent=gene-AD11_RS19105;Dbxref=GenBank:WP_000071554.1;Name=WP_000071554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311752.1;locus_tag=AD11_RS19105;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_000071554.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 99659 100646 . - . ID=gene-AD11_RS19110;Name=AD11_RS19110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19110;old_locus_tag=AD11_3221;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 99659 100646 . - 0 ID=cds-AD11_RS19110;Parent=gene-AD11_RS19110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311753.1;locus_tag=AD11_RS19110;product=YscQ/HrcQ family type III secretion apparatus protein;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 100606 100725 . - . ID=gene-AD11_RS33060;Name=AD11_RS33060;end_range=100725,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33060;partial=true;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 100606 100725 . - 0 ID=cds-AD11_RS33060;Parent=gene-AD11_RS33060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=100725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344669.1;locus_tag=AD11_RS33060;partial=true;product=type III secretion system needle length determinant%2C SpaN/EivJ family;pseudo=true;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 100738 102348 . - . ID=gene-AD11_RS19115;Name=AD11_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19115;old_locus_tag=AD11_3222 NZ_JJLL01000147.1 Protein Homology CDS 100738 102348 . - 0 ID=cds-WP_000676901.1;Parent=gene-AD11_RS19115;Dbxref=GenBank:WP_000676901.1;Name=WP_000676901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613747.1;locus_tag=AD11_RS19115;product=glycoside hydrolase family 15 protein;protein_id=WP_000676901.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 102582 102655 . - . ID=gene-AD11_RS19120;Name=AD11_RS19120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS19120;old_locus_tag=AD11_3223 NZ_JJLL01000147.1 tRNAscan-SE tRNA 102582 102655 . - . ID=rna-AD11_RS19120;Parent=gene-AD11_RS19120;anticodon=(pos:complement(102621..102623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS19120;product=tRNA-Gly NZ_JJLL01000147.1 tRNAscan-SE exon 102582 102655 . - . ID=exon-AD11_RS19120-1;Parent=rna-AD11_RS19120;anticodon=(pos:complement(102621..102623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS19120;product=tRNA-Gly NZ_JJLL01000147.1 RefSeq gene 102734 103489 . - . ID=gene-AD11_RS19125;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AD11_RS19125;old_locus_tag=AD11_3224 NZ_JJLL01000147.1 Protein Homology CDS 102734 103489 . - 0 ID=cds-WP_001301085.1;Parent=gene-AD11_RS19125;Dbxref=GenBank:WP_001301085.1;Name=WP_001301085.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417341.4;locus_tag=AD11_RS19125;product=amidase activator ActS;protein_id=WP_001301085.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 103904 106201 . + . ID=gene-AD11_RS19130;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AD11_RS19130;old_locus_tag=AD11_3225 NZ_JJLL01000147.1 Protein Homology CDS 103904 106201 . + 0 ID=cds-WP_033866503.1;Parent=gene-AD11_RS19130;Dbxref=GenBank:WP_033866503.1;Name=WP_033866503.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AD11_RS19130;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_033866503.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 106212 107090 . + . ID=gene-AD11_RS19135;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AD11_RS19135;old_locus_tag=AD11_3226 NZ_JJLL01000147.1 Protein Homology CDS 106212 107090 . + 0 ID=cds-WP_000459182.1;Parent=gene-AD11_RS19135;Dbxref=GenBank:WP_000459182.1;Name=WP_000459182.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417343.1;locus_tag=AD11_RS19135;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459182.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 107087 107566 . + . ID=gene-AD11_RS19140;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AD11_RS19140;old_locus_tag=AD11_3227 NZ_JJLL01000147.1 Protein Homology CDS 107087 107566 . + 0 ID=cds-WP_001016605.1;Parent=gene-AD11_RS19140;Dbxref=GenBank:WP_001016605.1;Name=WP_001016605.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AD11_RS19140;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_001016605.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 107606 109384 . - . ID=gene-AD11_RS19145;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=AD11_RS19145;old_locus_tag=AD11_3228 NZ_JJLL01000147.1 Protein Homology CDS 107606 109384 . - 0 ID=cds-WP_000417791.1;Parent=gene-AD11_RS19145;Dbxref=GenBank:WP_000417791.1;Name=WP_000417791.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=ygeV;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417345.1;locus_tag=AD11_RS19145;product=sigma-54 interaction domain-containing protein;protein_id=WP_000417791.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 109863 111050 . + . ID=gene-AD11_RS19150;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AD11_RS19150;old_locus_tag=AD11_3229 NZ_JJLL01000147.1 Protein Homology CDS 109863 111050 . + 0 ID=cds-WP_000859787.1;Parent=gene-AD11_RS19150;Dbxref=GenBank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AD11_RS19150;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 111108 112304 . + . ID=gene-AD11_RS19155;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AD11_RS19155;old_locus_tag=AD11_3230 NZ_JJLL01000147.1 Protein Homology CDS 111108 112304 . + 0 ID=cds-WP_000110493.1;Parent=gene-AD11_RS19155;Dbxref=GenBank:WP_000110493.1;Name=WP_000110493.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AD11_RS19155;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 112362 113573 . + . ID=gene-AD11_RS19160;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=AD11_RS19160;old_locus_tag=AD11_3231 NZ_JJLL01000147.1 Protein Homology CDS 112362 113573 . + 0 ID=cds-WP_001107125.1;Parent=gene-AD11_RS19160;Dbxref=GenBank:WP_001107125.1;Name=WP_001107125.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AD11_RS19160;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107125.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 113626 115011 . + . ID=gene-AD11_RS19165;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=AD11_RS19165;old_locus_tag=AD11_3232 NZ_JJLL01000147.1 Protein Homology CDS 113626 115011 . + 0 ID=cds-WP_001264452.1;Parent=gene-AD11_RS19165;Dbxref=GenBank:WP_001264452.1;Name=WP_001264452.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AD11_RS19165;product=D-phenylhydantoinase;protein_id=WP_001264452.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 115059 115991 . + . ID=gene-AD11_RS19170;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AD11_RS19170;old_locus_tag=AD11_3233 NZ_JJLL01000147.1 Protein Homology CDS 115059 115991 . + 0 ID=cds-WP_033865718.1;Parent=gene-AD11_RS19170;Dbxref=GenBank:WP_033865718.1;Name=WP_033865718.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=AD11_RS19170;product=carbamate kinase;protein_id=WP_033865718.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 116032 117657 . - . ID=gene-AD11_RS19175;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=AD11_RS19175;old_locus_tag=AD11_3234 NZ_JJLL01000147.1 Protein Homology CDS 116032 117657 . - 0 ID=cds-WP_033866504.1;Parent=gene-AD11_RS19175;Dbxref=GenBank:WP_033866504.1;Name=WP_033866504.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AD11_RS19175;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_033866504.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 117705 118475 . - . ID=gene-AD11_RS19180;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=AD11_RS19180 NZ_JJLL01000147.1 Protein Homology CDS 117705 118475 . - 0 ID=cds-WP_001298920.1;Parent=gene-AD11_RS19180;Dbxref=GenBank:WP_001298920.1;Name=WP_001298920.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417352.2;locus_tag=AD11_RS19180;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_001298920.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 118578 119156 . + . ID=gene-AD11_RS19185;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AD11_RS19185;old_locus_tag=AD11_3236 NZ_JJLL01000147.1 Protein Homology CDS 118578 119156 . + 0 ID=cds-WP_001272828.1;Parent=gene-AD11_RS19185;Dbxref=GenBank:WP_001272828.1;Name=WP_001272828.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417353.1;locus_tag=AD11_RS19185;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272828.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 119478 122576 . + . ID=gene-AD11_RS19190;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AD11_RS19190;old_locus_tag=AD11_3237 NZ_JJLL01000147.1 Protein Homology CDS 119478 122576 . + 0 ID=cds-WP_000502391.1;Parent=gene-AD11_RS19190;Dbxref=GenBank:WP_000502391.1;Name=WP_000502391.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417354.1;locus_tag=AD11_RS19190;product=putative selenate reductase subunit YgfK;protein_id=WP_000502391.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 122579 123907 . + . ID=gene-AD11_RS19195;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AD11_RS19195;old_locus_tag=AD11_3238 NZ_JJLL01000147.1 Protein Homology CDS 122579 123907 . + 0 ID=cds-WP_033865720.1;Parent=gene-AD11_RS19195;Dbxref=GenBank:WP_033865720.1;Name=WP_033865720.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417355.4;locus_tag=AD11_RS19195;product=putative aminohydrolase SsnA;protein_id=WP_033865720.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 123958 124737 . + . ID=gene-AD11_RS19200;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=AD11_RS19200;old_locus_tag=AD11_3239 NZ_JJLL01000147.1 Protein Homology CDS 123958 124737 . + 0 ID=cds-WP_000572462.1;Parent=gene-AD11_RS19200;Dbxref=GenBank:WP_000572462.1;Name=WP_000572462.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AD11_RS19200;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572462.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 124734 127604 . + . ID=gene-AD11_RS19205;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=AD11_RS19205;old_locus_tag=AD11_3240 NZ_JJLL01000147.1 Protein Homology CDS 124734 127604 . + 0 ID=cds-WP_000583615.1;Parent=gene-AD11_RS19205;Dbxref=GenBank:WP_000583615.1;Name=WP_000583615.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AD11_RS19205;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_000583615.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 127769 129169 . + . ID=gene-AD11_RS19210;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AD11_RS19210;old_locus_tag=AD11_3241 NZ_JJLL01000147.1 Protein Homology CDS 127769 129169 . + 0 ID=cds-WP_001280192.1;Parent=gene-AD11_RS19210;Dbxref=GenBank:WP_001280192.1;Name=WP_001280192.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AD11_RS19210;product=xanthine/proton symporter XanQ;protein_id=WP_001280192.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 129187 130503 . + . ID=gene-AD11_RS19215;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=AD11_RS19215;old_locus_tag=AD11_3242 NZ_JJLL01000147.1 Protein Homology CDS 129187 130503 . + 0 ID=cds-WP_001336279.1;Parent=gene-AD11_RS19215;Dbxref=GenBank:WP_001336279.1;Name=WP_001336279.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AD11_RS19215;product=guanine deaminase;protein_id=WP_001336279.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 130539 131906 . + . ID=gene-AD11_RS19220;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=AD11_RS19220;old_locus_tag=AD11_3243 NZ_JJLL01000147.1 Protein Homology CDS 130539 131906 . + 0 ID=cds-WP_000012163.1;Parent=gene-AD11_RS19220;Dbxref=GenBank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AD11_RS19220;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 131942 132430 . - . ID=gene-AD11_RS19225;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=AD11_RS19225;old_locus_tag=AD11_3244 NZ_JJLL01000147.1 Protein Homology CDS 131942 132430 . - 0 ID=cds-WP_000838428.1;Parent=gene-AD11_RS19225;Dbxref=GenBank:WP_000838428.1;Name=WP_000838428.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;gene=ygfS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AD11_RS19225;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838428.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 132430 134349 . - . ID=gene-AD11_RS19230;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AD11_RS19230;old_locus_tag=AD11_3245 NZ_JJLL01000147.1 Protein Homology CDS 132430 134349 . - 0 ID=cds-WP_033866505.1;Parent=gene-AD11_RS19230;Dbxref=GenBank:WP_033866505.1;Name=WP_033866505.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AD11_RS19230;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_033866505.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 134785 136233 . + . ID=gene-AD11_RS19240;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AD11_RS19240;old_locus_tag=AD11_3246 NZ_JJLL01000147.1 Protein Homology CDS 134785 136233 . + 0 ID=cds-WP_001295374.1;Parent=gene-AD11_RS19240;Dbxref=GenBank:WP_001295374.1;Name=WP_001295374.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AD11_RS19240;product=urate/proton symporter UacT;protein_id=WP_001295374.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 136235 136360 . + . ID=gene-AD11_RS19245;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AD11_RS19245;old_locus_tag=AD11_3247 NZ_JJLL01000147.1 Protein Homology CDS 136235 136360 . + 0 ID=cds-WP_001010156.1;Parent=gene-AD11_RS19245;Dbxref=GenBank:WP_001010156.1;Name=WP_001010156.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AD11_RS19245;product=protein YqfG;protein_id=WP_001010156.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 136357 136428 . - . ID=gene-AD11_RS31740;Name=AD11_RS31740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31740 NZ_JJLL01000147.1 Protein Homology CDS 136357 136428 . - 0 ID=cds-WP_120795390.1;Parent=gene-AD11_RS31740;Dbxref=GenBank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AD11_RS31740;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 136483 137031 . + . ID=gene-AD11_RS19250;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AD11_RS19250;old_locus_tag=AD11_3248 NZ_JJLL01000147.1 Protein Homology CDS 136483 137031 . + 0 ID=cds-WP_001192790.1;Parent=gene-AD11_RS19250;Dbxref=GenBank:WP_001192790.1;Name=WP_001192790.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311788.1;locus_tag=AD11_RS19250;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192790.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 137074 138591 . - . ID=gene-AD11_RS19255;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AD11_RS19255;old_locus_tag=AD11_3249 NZ_JJLL01000147.1 Protein Homology CDS 137074 138591 . - 0 ID=cds-WP_000003071.1;Parent=gene-AD11_RS19255;Dbxref=GenBank:WP_000003071.1;Name=WP_000003071.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AD11_RS19255;product=lysine--tRNA ligase;protein_id=WP_000003071.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 138601 139699 . - . ID=gene-AD11_RS19260;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AD11_RS19260;old_locus_tag=AD11_3250 NZ_JJLL01000147.1 Protein Homology CDS 139625 139699 . - 0 ID=cds-WP_001701073.1;Parent=gene-AD11_RS19260;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD11_RS19260;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJLL01000147.1 Protein Homology CDS 138601 139623 . - 0 ID=cds-WP_001701073.1;Parent=gene-AD11_RS19260;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AD11_RS19260;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 139790 141523 . - . ID=gene-AD11_RS19265;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AD11_RS19265;old_locus_tag=AD11_3252 NZ_JJLL01000147.1 Protein Homology CDS 139790 141523 . - 0 ID=cds-WP_000813212.1;Parent=gene-AD11_RS19265;Dbxref=GenBank:WP_000813212.1;Name=WP_000813212.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311791.1;locus_tag=AD11_RS19265;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_000813212.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 141529 142239 . - . ID=gene-AD11_RS19270;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AD11_RS19270;old_locus_tag=AD11_3253 NZ_JJLL01000147.1 Protein Homology CDS 141529 142239 . - 0 ID=cds-WP_000715216.1;Parent=gene-AD11_RS19270;Dbxref=GenBank:WP_000715216.1;Name=WP_000715216.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AD11_RS19270;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715216.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 142264 143160 . - . ID=gene-AD11_RS19275;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AD11_RS19275;old_locus_tag=AD11_3254 NZ_JJLL01000147.1 Protein Homology CDS 142264 143160 . - 0 ID=cds-WP_000806638.1;Parent=gene-AD11_RS19275;Dbxref=GenBank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AD11_RS19275;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 143272 143793 . + . ID=gene-AD11_RS19280;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AD11_RS19280;old_locus_tag=AD11_3255 NZ_JJLL01000147.1 Protein Homology CDS 143272 143793 . + 0 ID=cds-WP_001055874.1;Parent=gene-AD11_RS19280;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AD11_RS19280;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 143833 144240 . - . ID=gene-AD11_RS19285;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AD11_RS19285;old_locus_tag=AD11_3256 NZ_JJLL01000147.1 Protein Homology CDS 143833 144240 . - 0 ID=cds-WP_033865723.1;Parent=gene-AD11_RS19285;Dbxref=GenBank:WP_033865723.1;Name=WP_033865723.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AD11_RS19285;product=protein YgfX;protein_id=WP_033865723.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 144221 144487 . - . ID=gene-AD11_RS19290;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AD11_RS19290;old_locus_tag=AD11_3257 NZ_JJLL01000147.1 Protein Homology CDS 144221 144487 . - 0 ID=cds-WP_000354046.1;Parent=gene-AD11_RS19290;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AD11_RS19290;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 144730 145710 . + . ID=gene-AD11_RS19295;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AD11_RS19295;old_locus_tag=AD11_3259 NZ_JJLL01000147.1 Protein Homology CDS 144730 145710 . + 0 ID=cds-WP_000886062.1;Parent=gene-AD11_RS19295;Dbxref=GenBank:WP_000886062.1;Name=WP_000886062.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AD11_RS19295;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 145906 146565 . - . ID=gene-AD11_RS19300;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AD11_RS19300;old_locus_tag=AD11_3260 NZ_JJLL01000147.1 Protein Homology CDS 145906 146565 . - 0 ID=cds-WP_000250274.1;Parent=gene-AD11_RS19300;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AD11_RS19300;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 146729 147040 . - . ID=gene-AD11_RS19305;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AD11_RS19305;old_locus_tag=AD11_3261 NZ_JJLL01000147.1 Protein Homology CDS 146729 147040 . - 0 ID=cds-WP_001182954.1;Parent=gene-AD11_RS19305;Dbxref=GenBank:WP_001182954.1;Name=WP_001182954.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AD11_RS19305;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182954.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 147085 148518 . + . ID=gene-AD11_RS19310;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AD11_RS19310;old_locus_tag=AD11_3262 NZ_JJLL01000147.1 Protein Homology CDS 147085 148518 . + 0 ID=cds-WP_001338826.1;Parent=gene-AD11_RS19310;Dbxref=GenBank:WP_001338826.1;Name=WP_001338826.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=AD11_RS19310;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001338826.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 148575 149318 . - . ID=gene-AD11_RS19315;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;locus_tag=AD11_RS19315;old_locus_tag=AD11_3263 NZ_JJLL01000147.1 Protein Homology CDS 148575 149318 . - 0 ID=cds-WP_033865725.1;Parent=gene-AD11_RS19315;Dbxref=GenBank:WP_033865725.1;Name=WP_033865725.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygfF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=AD11_RS19315;product=SDR family oxidoreductase;protein_id=WP_033865725.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 149585 152458 . - . ID=gene-AD11_RS19320;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AD11_RS19320;old_locus_tag=AD11_3264 NZ_JJLL01000147.1 Protein Homology CDS 149585 152458 . - 0 ID=cds-WP_000195062.1;Parent=gene-AD11_RS19320;Dbxref=GenBank:WP_000195062.1;Name=WP_000195062.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417379.1;locus_tag=AD11_RS19320;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000195062.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 152577 152966 . - . ID=gene-AD11_RS19325;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AD11_RS19325;old_locus_tag=AD11_3265 NZ_JJLL01000147.1 Protein Homology CDS 152577 152966 . - 0 ID=cds-WP_001295377.1;Parent=gene-AD11_RS19325;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AD11_RS19325;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 152990 154084 . - . ID=gene-AD11_RS19330;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AD11_RS19330;old_locus_tag=AD11_3266 NZ_JJLL01000147.1 Protein Homology CDS 152990 154084 . - 0 ID=cds-WP_000068701.1;Parent=gene-AD11_RS19330;Dbxref=GenBank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AD11_RS19330;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 154375 154458 . + . ID=gene-AD11_RS31745;Name=AD11_RS31745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31745;old_locus_tag=AD11_3267 NZ_JJLL01000147.1 Protein Homology CDS 154375 154458 . + 0 ID=cds-WP_120795391.1;Parent=gene-AD11_RS31745;Dbxref=GenBank:WP_120795391.1;Name=WP_120795391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AD11_RS31745;product=protein YqfI;protein_id=WP_120795391.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 154532 155734 . - . ID=gene-AD11_RS19335;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AD11_RS19335;old_locus_tag=AD11_3268 NZ_JJLL01000147.1 Protein Homology CDS 154532 155734 . - 0 ID=cds-WP_001192229.1;Parent=gene-AD11_RS19335;Dbxref=GenBank:WP_001192229.1;Name=WP_001192229.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417382.1;locus_tag=AD11_RS19335;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192229.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 155757 156935 . - . ID=gene-AD11_RS19340;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AD11_RS19340;old_locus_tag=AD11_3269 NZ_JJLL01000147.1 Protein Homology CDS 155757 156935 . - 0 ID=cds-WP_000111195.1;Parent=gene-AD11_RS19340;Dbxref=GenBank:WP_000111195.1;Name=WP_000111195.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AD11_RS19340;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111195.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 156932 158257 . - . ID=gene-AD11_RS19345;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AD11_RS19345;old_locus_tag=AD11_3270 NZ_JJLL01000147.1 Protein Homology CDS 156932 158257 . - 0 ID=cds-WP_033865726.1;Parent=gene-AD11_RS19345;Dbxref=GenBank:WP_033865726.1;Name=WP_033865726.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417384.1;locus_tag=AD11_RS19345;product=Xaa-Pro aminopeptidase;protein_id=WP_033865726.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 158283 158861 . - . ID=gene-AD11_RS19350;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AD11_RS19350;old_locus_tag=AD11_3271 NZ_JJLL01000147.1 Protein Homology CDS 158283 158861 . - 0 ID=cds-WP_001295378.1;Parent=gene-AD11_RS19350;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AD11_RS19350;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 159029 159358 . + . ID=gene-AD11_RS19355;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AD11_RS19355;old_locus_tag=AD11_3272 NZ_JJLL01000147.1 Protein Homology CDS 159029 159358 . + 0 ID=cds-WP_001276008.1;Parent=gene-AD11_RS19355;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AD11_RS19355;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 159400 159583 . + . ID=gene-AD11_RS27665;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AD11_RS27665 NZ_JJLL01000147.1 cmsearch ncRNA 159400 159583 . + . ID=rna-AD11_RS27665;Parent=gene-AD11_RS27665;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27665;product=6S RNA NZ_JJLL01000147.1 cmsearch exon 159400 159583 . + . ID=exon-AD11_RS27665-1;Parent=rna-AD11_RS27665;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27665;product=6S RNA NZ_JJLL01000147.1 RefSeq gene 159604 160206 . + . ID=gene-AD11_RS19360;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AD11_RS19360;old_locus_tag=AD11_3273 NZ_JJLL01000147.1 Protein Homology CDS 159604 160206 . + 0 ID=cds-WP_000192748.1;Parent=gene-AD11_RS19360;Dbxref=GenBank:WP_000192748.1;Name=WP_000192748.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AD11_RS19360;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_000192748.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 160307 160366 . - . ID=gene-AD11_RS29680;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AD11_RS29680 NZ_JJLL01000147.1 Protein Homology CDS 160307 160366 . - 0 ID=cds-WP_010723220.1;Parent=gene-AD11_RS29680;Dbxref=GenBank:WP_010723220.1;Name=WP_010723220.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AD11_RS29680;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_010723220.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 160595 161827 . - . ID=gene-AD11_RS19365;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AD11_RS19365;old_locus_tag=AD11_3274 NZ_JJLL01000147.1 Protein Homology CDS 160595 161827 . - 0 ID=cds-WP_001151604.1;Parent=gene-AD11_RS19365;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AD11_RS19365;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 162083 162742 . - . ID=gene-AD11_RS19370;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AD11_RS19370;old_locus_tag=AD11_3276 NZ_JJLL01000147.1 Protein Homology CDS 162083 162742 . - 0 ID=cds-WP_000189743.1;Parent=gene-AD11_RS19370;Dbxref=GenBank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AD11_RS19370;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 162798 163028 . - . ID=gene-AD11_RS19375;Name=AD11_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19375;old_locus_tag=AD11_3277 NZ_JJLL01000147.1 Protein Homology CDS 162798 163028 . - 0 ID=cds-WP_001322018.1;Parent=gene-AD11_RS19375;Dbxref=GenBank:WP_001322018.1;Name=WP_001322018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AD11_RS19375;product=hypothetical protein;protein_id=WP_001322018.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 163170 164063 . + . ID=gene-AD11_RS19380;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AD11_RS19380;old_locus_tag=AD11_3278 NZ_JJLL01000147.1 Protein Homology CDS 163170 164063 . + 0 ID=cds-WP_000828351.1;Parent=gene-AD11_RS19380;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AD11_RS19380;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 164267 166411 . + . ID=gene-AD11_RS19385;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AD11_RS19385;old_locus_tag=AD11_3279 NZ_JJLL01000147.1 Protein Homology CDS 164267 166411 . + 0 ID=cds-WP_033865727.1;Parent=gene-AD11_RS19385;Dbxref=GenBank:WP_033865727.1;Name=WP_033865727.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=AD11_RS19385;product=methylmalonyl-CoA mutase;protein_id=WP_033865727.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 166404 167399 . + . ID=gene-AD11_RS19390;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AD11_RS19390;old_locus_tag=AD11_3280 NZ_JJLL01000147.1 Protein Homology CDS 166404 167399 . + 0 ID=cds-WP_000606525.1;Parent=gene-AD11_RS19390;Dbxref=GenBank:WP_000606525.1;Name=WP_000606525.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AD11_RS19390;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606525.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 167410 168195 . + . ID=gene-AD11_RS19395;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AD11_RS19395;old_locus_tag=AD11_3281 NZ_JJLL01000147.1 Protein Homology CDS 167410 168195 . + 0 ID=cds-WP_000122080.1;Parent=gene-AD11_RS19395;Dbxref=GenBank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AD11_RS19395;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 168219 169697 . + . ID=gene-AD11_RS19400;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AD11_RS19400;old_locus_tag=AD11_3282 NZ_JJLL01000147.1 Protein Homology CDS 168219 169697 . + 0 ID=cds-WP_000449965.1;Parent=gene-AD11_RS19400;Dbxref=GenBank:WP_000449965.1;Name=WP_000449965.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417395.1;locus_tag=AD11_RS19400;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449965.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 169694 170590 . - . ID=gene-AD11_RS19405;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AD11_RS19405;old_locus_tag=AD11_3283 NZ_JJLL01000147.1 Protein Homology CDS 169694 170590 . - 0 ID=cds-WP_000350807.1;Parent=gene-AD11_RS19405;Dbxref=GenBank:WP_000350807.1;Name=WP_000350807.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AD11_RS19405;product=LysR family transcriptional regulator SrsR;protein_id=WP_000350807.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 170757 171497 . - . ID=gene-AD11_RS19410;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AD11_RS19410;old_locus_tag=AD11_3284 NZ_JJLL01000147.1 Protein Homology CDS 170757 171497 . - 0 ID=cds-WP_000669834.1;Parent=gene-AD11_RS19410;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AD11_RS19410;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 171590 172225 . - . ID=gene-AD11_RS19415;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AD11_RS19415;old_locus_tag=AD11_3285 NZ_JJLL01000147.1 Protein Homology CDS 171590 172225 . - 0 ID=cds-WP_000493352.1;Parent=gene-AD11_RS19415;Dbxref=GenBank:WP_000493352.1;Name=WP_000493352.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=AD11_RS19415;product=arginine exporter ArgO;protein_id=WP_000493352.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 172364 173224 . - . ID=gene-AD11_RS19420;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AD11_RS19420;old_locus_tag=AD11_3286 NZ_JJLL01000147.1 Protein Homology CDS 172364 173224 . - 0 ID=cds-WP_000389818.1;Parent=gene-AD11_RS19420;Dbxref=GenBank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AD11_RS19420;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 173582 174661 . - . ID=gene-AD11_RS19425;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AD11_RS19425;old_locus_tag=AD11_3287 NZ_JJLL01000147.1 Protein Homology CDS 173582 174661 . - 0 ID=cds-WP_000034372.1;Parent=gene-AD11_RS19425;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AD11_RS19425;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 174876 176039 . - . ID=gene-AD11_RS19430;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AD11_RS19430;old_locus_tag=AD11_3288 NZ_JJLL01000147.1 Protein Homology CDS 174876 176039 . - 0 ID=cds-WP_000111269.1;Parent=gene-AD11_RS19430;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AD11_RS19430;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 176089 177108 . - . ID=gene-AD11_RS19435;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AD11_RS19435;old_locus_tag=AD11_3289 NZ_JJLL01000147.1 Protein Homology CDS 176089 177108 . - 0 ID=cds-WP_000218480.1;Parent=gene-AD11_RS19435;Dbxref=GenBank:WP_000218480.1;Name=WP_000218480.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AD11_RS19435;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 177393 178106 . - . ID=gene-AD11_RS19440;Name=yggC;gbkey=Gene;gene=yggC;gene_biotype=protein_coding;locus_tag=AD11_RS19440;old_locus_tag=AD11_3290 NZ_JJLL01000147.1 Protein Homology CDS 177393 178106 . - 0 ID=cds-WP_000687705.1;Parent=gene-AD11_RS19440;Dbxref=GenBank:WP_000687705.1;Name=WP_000687705.1;gbkey=CDS;gene=yggC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417403.1;locus_tag=AD11_RS19440;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687705.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 178103 178612 . - . ID=gene-AD11_RS19445;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AD11_RS19445;old_locus_tag=AD11_3291 NZ_JJLL01000147.1 Protein Homology CDS 178103 178612 . - 0 ID=cds-WP_000224147.1;Parent=gene-AD11_RS19445;Dbxref=GenBank:WP_000224147.1;Name=WP_000224147.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=AD11_RS19445;product=fumarase E;protein_id=WP_000224147.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 178634 179599 . - . ID=gene-AD11_RS19450;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AD11_RS19450;old_locus_tag=AD11_3292 NZ_JJLL01000147.1 Protein Homology CDS 178634 179599 . - 0 ID=cds-WP_000987283.1;Parent=gene-AD11_RS19450;Dbxref=GenBank:WP_000987283.1;Name=WP_000987283.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AD11_RS19450;product=class II fructose-bisphosphatase;protein_id=WP_000987283.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 179596 180873 . - . ID=gene-AD11_RS19455;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;locus_tag=AD11_RS19455;old_locus_tag=AD11_3293 NZ_JJLL01000147.1 Protein Homology CDS 179596 180873 . - 0 ID=cds-WP_000853247.1;Parent=gene-AD11_RS19455;Dbxref=GenBank:WP_000853247.1;Name=WP_000853247.1;gbkey=CDS;gene=yggP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026187.1;locus_tag=AD11_RS19455;product=zinc-binding dehydrogenase;protein_id=WP_000853247.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 180888 182276 . - . ID=gene-AD11_RS19460;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=AD11_RS19460;old_locus_tag=AD11_3294 NZ_JJLL01000147.1 Protein Homology CDS 180888 182276 . - 0 ID=cds-WP_000428805.1;Parent=gene-AD11_RS19460;Dbxref=GenBank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AD11_RS19460;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 182304 182747 . - . ID=gene-AD11_RS19465;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AD11_RS19465;old_locus_tag=AD11_3295 NZ_JJLL01000147.1 Protein Homology CDS 182304 182747 . - 0 ID=cds-WP_001239650.1;Parent=gene-AD11_RS19465;Dbxref=GenBank:WP_001239650.1;Name=WP_001239650.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=AD11_RS19465;product=PTS mannitol transporter subunit IIA;protein_id=WP_001239650.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 183061 185052 . - . ID=gene-AD11_RS19470;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AD11_RS19470;old_locus_tag=AD11_3296 NZ_JJLL01000147.1 Protein Homology CDS 183061 185052 . - 0 ID=cds-WP_000098614.1;Parent=gene-AD11_RS19470;Dbxref=GenBank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AD11_RS19470;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 185330 186088 . + . ID=gene-AD11_RS19475;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AD11_RS19475;old_locus_tag=AD11_3297 NZ_JJLL01000147.1 Protein Homology CDS 185330 186088 . + 0 ID=cds-WP_001326497.1;Parent=gene-AD11_RS19475;Dbxref=GenBank:WP_001326497.1;Name=WP_001326497.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417411.2;locus_tag=AD11_RS19475;product=metalloprotease LoiP;protein_id=WP_001326497.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 186294 187214 . - . ID=gene-AD11_RS19480;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AD11_RS19480;old_locus_tag=AD11_3298 NZ_JJLL01000147.1 Protein Homology CDS 186294 187214 . - 0 ID=cds-WP_000105577.1;Parent=gene-AD11_RS19480;Dbxref=GenBank:WP_000105577.1;Name=WP_000105577.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AD11_RS19480;product=agmatinase;protein_id=WP_000105577.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 187352 189328 . - . ID=gene-AD11_RS19485;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AD11_RS19485;old_locus_tag=AD11_3299 NZ_JJLL01000147.1 Protein Homology CDS 187352 189328 . - 0 ID=cds-WP_001300904.1;Parent=gene-AD11_RS19485;Dbxref=GenBank:WP_001300904.1;Name=WP_001300904.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417413.1;locus_tag=AD11_RS19485;product=biosynthetic arginine decarboxylase;protein_id=WP_001300904.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 189337 189468 . - . ID=gene-AD11_RS19490;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AD11_RS19490;old_locus_tag=AD11_3300 NZ_JJLL01000147.1 Protein Homology CDS 189337 189468 . - 0 ID=cds-WP_001297406.1;Parent=gene-AD11_RS19490;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AD11_RS19490;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 189562 189705 . - . ID=gene-AD11_RS32930;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AD11_RS32930 NZ_JJLL01000147.1 Protein Homology CDS 189562 189705 . - 0 ID=cds-WP_001297404.1;Parent=gene-AD11_RS32930;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AD11_RS32930;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 189816 190067 . - . ID=gene-AD11_RS32935;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AD11_RS32935 NZ_JJLL01000147.1 Protein Homology CDS 189816 190067 . - 0 ID=cds-WP_001303651.1;Parent=gene-AD11_RS32935;Dbxref=GenBank:WP_001303651.1;Name=WP_001303651.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AD11_RS32935;product=protein YqgD;protein_id=WP_001303651.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 190123 191277 . + . ID=gene-AD11_RS19500;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AD11_RS19500;old_locus_tag=AD11_3302 NZ_JJLL01000147.1 Protein Homology CDS 190123 191277 . + 0 ID=cds-WP_001062128.1;Parent=gene-AD11_RS19500;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AD11_RS19500;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 191701 193095 . + . ID=gene-AD11_RS19505;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AD11_RS19505;old_locus_tag=AD11_3303 NZ_JJLL01000147.1 Protein Homology CDS 191701 193095 . + 0 ID=cds-WP_001112301.1;Parent=gene-AD11_RS19505;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AD11_RS19505;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 193172 193669 . + . ID=gene-AD11_RS19510;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AD11_RS19510;old_locus_tag=AD11_3304 NZ_JJLL01000147.1 Protein Homology CDS 193172 193669 . + 0 ID=cds-WP_001300769.1;Parent=gene-AD11_RS19510;Dbxref=GenBank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AD11_RS19510;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001300769.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 193764 194471 . + . ID=gene-AD11_RS19515;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AD11_RS19515;old_locus_tag=AD11_3305 NZ_JJLL01000147.1 Protein Homology CDS 193764 194471 . + 0 ID=cds-WP_000286500.1;Parent=gene-AD11_RS19515;Dbxref=GenBank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AD11_RS19515;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 194551 195282 . + . ID=gene-AD11_RS19520;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AD11_RS19520;old_locus_tag=AD11_3306 NZ_JJLL01000147.1 Protein Homology CDS 194551 195282 . + 0 ID=cds-WP_001300912.1;Parent=gene-AD11_RS19520;Dbxref=GenBank:WP_001300912.1;Name=WP_001300912.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AD11_RS19520;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001300912.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 195295 196245 . + . ID=gene-AD11_RS19525;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AD11_RS19525;old_locus_tag=AD11_3307 NZ_JJLL01000147.1 Protein Homology CDS 195295 196245 . + 0 ID=cds-WP_000593273.1;Parent=gene-AD11_RS19525;Dbxref=GenBank:WP_000593273.1;Name=WP_000593273.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AD11_RS19525;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 196354 196917 . + . ID=gene-AD11_RS19530;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AD11_RS19530;old_locus_tag=AD11_3308 NZ_JJLL01000147.1 Protein Homology CDS 196354 196917 . + 0 ID=cds-WP_001053178.1;Parent=gene-AD11_RS19530;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AD11_RS19530;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 196917 197333 . + . ID=gene-AD11_RS19535;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AD11_RS19535;old_locus_tag=AD11_3309 NZ_JJLL01000147.1 Protein Homology CDS 196917 197333 . + 0 ID=cds-WP_000017106.1;Parent=gene-AD11_RS19535;Dbxref=GenBank:WP_000017106.1;Name=WP_000017106.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AD11_RS19535;product=Holliday junction resolvase RuvX;protein_id=WP_000017106.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 197517 198497 . - . ID=gene-AD11_RS19540;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=AD11_RS19540;old_locus_tag=AD11_3311 NZ_JJLL01000147.1 Protein Homology CDS 197517 198497 . - 0 ID=cds-WP_001618842.1;Parent=gene-AD11_RS19540;Dbxref=GenBank:WP_001618842.1;Name=WP_001618842.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=AD11_RS19540;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_001618842.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 198515 199219 . + . ID=gene-AD11_RS19545;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AD11_RS19545;old_locus_tag=AD11_3312 NZ_JJLL01000147.1 Protein Homology CDS 198515 199219 . + 0 ID=cds-WP_000997795.1;Parent=gene-AD11_RS19545;Dbxref=GenBank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AD11_RS19545;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 199237 199803 . + . ID=gene-AD11_RS19550;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AD11_RS19550;old_locus_tag=AD11_3313 NZ_JJLL01000147.1 Protein Homology CDS 199237 199803 . + 0 ID=cds-WP_001094831.1;Parent=gene-AD11_RS19550;Dbxref=GenBank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AD11_RS19550;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 199800 200090 . + . ID=gene-AD11_RS19555;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AD11_RS19555;old_locus_tag=AD11_3314 NZ_JJLL01000147.1 Protein Homology CDS 199800 200090 . + 0 ID=cds-WP_000994920.1;Parent=gene-AD11_RS19555;Dbxref=GenBank:WP_000994920.1;Name=WP_000994920.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AD11_RS19555;product=DUF167 family protein YggU;protein_id=WP_000994920.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 200098 200691 . + . ID=gene-AD11_RS19560;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AD11_RS19560;old_locus_tag=AD11_3315 NZ_JJLL01000147.1 Protein Homology CDS 200098 200691 . + 0 ID=cds-WP_001174735.1;Parent=gene-AD11_RS19560;Dbxref=GenBank:WP_001174735.1;Name=WP_001174735.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;gene=rdgB;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708719.1;locus_tag=AD11_RS19560;product=XTP/dITP diphosphatase;protein_id=WP_001174735.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 200684 201820 . + . ID=gene-AD11_RS19565;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AD11_RS19565;old_locus_tag=AD11_3316 NZ_JJLL01000147.1 Protein Homology CDS 200684 201820 . + 0 ID=cds-WP_000239928.1;Parent=gene-AD11_RS19565;Dbxref=GenBank:WP_000239928.1;Name=WP_000239928.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708720.1;locus_tag=AD11_RS19565;product=radical SAM family heme chaperone HemW;protein_id=WP_000239928.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 201975 202982 . - . ID=gene-AD11_RS19570;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AD11_RS19570;old_locus_tag=AD11_3317 NZ_JJLL01000147.1 Protein Homology CDS 201975 202982 . - 0 ID=cds-WP_033865730.1;Parent=gene-AD11_RS19570;Dbxref=GenBank:WP_033865730.1;Name=WP_033865730.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AD11_RS19570;product=DUF1202 family protein;protein_id=WP_033865730.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 203099 204145 . - . ID=gene-AD11_RS19575;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AD11_RS19575;old_locus_tag=AD11_3318 NZ_JJLL01000147.1 Protein Homology CDS 203099 204145 . - 0 ID=cds-WP_000394125.1;Parent=gene-AD11_RS19575;Dbxref=GenBank:WP_000394125.1;Name=WP_000394125.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708728.1;locus_tag=AD11_RS19575;product=L-asparaginase 2;protein_id=WP_000394125.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 204321 205040 . - . ID=gene-AD11_RS19580;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AD11_RS19580;old_locus_tag=AD11_3319 NZ_JJLL01000147.1 Protein Homology CDS 204321 205040 . - 0 ID=cds-WP_000984796.1;Parent=gene-AD11_RS19580;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AD11_RS19580;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 205224 205550 . - . ID=gene-AD11_RS19590;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AD11_RS19590;old_locus_tag=AD11_3321 NZ_JJLL01000147.1 Protein Homology CDS 205224 205550 . - 0 ID=cds-WP_001107564.1;Parent=gene-AD11_RS19590;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AD11_RS19590;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 205550 206269 . - . ID=gene-AD11_RS19595;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AD11_RS19595;old_locus_tag=AD11_3322 NZ_JJLL01000147.1 Protein Homology CDS 205550 206269 . - 0 ID=cds-WP_000786911.1;Parent=gene-AD11_RS19595;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AD11_RS19595;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 206430 207482 . + . ID=gene-AD11_RS19600;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AD11_RS19600;old_locus_tag=AD11_3323 NZ_JJLL01000147.1 Protein Homology CDS 206430 207482 . + 0 ID=cds-WP_001321419.1;Parent=gene-AD11_RS19600;Dbxref=GenBank:WP_001321419.1;Name=WP_001321419.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417436.1;locus_tag=AD11_RS19600;product=A/G-specific adenine glycosylase;protein_id=WP_001321419.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 207510 207785 . + . ID=gene-AD11_RS19605;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AD11_RS19605;old_locus_tag=AD11_3324 NZ_JJLL01000147.1 Protein Homology CDS 207510 207785 . + 0 ID=cds-WP_000091700.1;Parent=gene-AD11_RS19605;Dbxref=GenBank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AD11_RS19605;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 207850 208929 . + . ID=gene-AD11_RS19610;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AD11_RS19610;old_locus_tag=AD11_3325 NZ_JJLL01000147.1 Protein Homology CDS 207850 208929 . + 0 ID=cds-WP_000760323.1;Parent=gene-AD11_RS19610;Dbxref=GenBank:WP_000760323.1;Name=WP_000760323.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AD11_RS19610;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000760323.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 209131 210387 . + . ID=gene-AD11_RS19615;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AD11_RS19615;old_locus_tag=AD11_3327 NZ_JJLL01000147.1 Protein Homology CDS 209131 210387 . + 0 ID=cds-WP_001299430.1;Parent=gene-AD11_RS19615;Dbxref=GenBank:WP_001299430.1;Name=WP_001299430.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AD11_RS19615;product=nucleoside permease NupG;protein_id=WP_001299430.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 210437 212572 . - . ID=gene-AD11_RS19620;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AD11_RS19620;old_locus_tag=AD11_3328 NZ_JJLL01000147.1 Protein Homology CDS 210437 212572 . - 0 ID=cds-WP_000839760.1;Parent=gene-AD11_RS19620;Dbxref=GenBank:WP_000839760.1;Name=WP_000839760.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417440.4;locus_tag=AD11_RS19620;product=ornithine decarboxylase;protein_id=WP_000839760.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 212734 212817 . - . ID=gene-AD11_RS32705;Name=yqgH;gbkey=Gene;gene=yqgH;gene_biotype=protein_coding;locus_tag=AD11_RS32705 NZ_JJLL01000147.1 Protein Homology CDS 212734 212817 . - 0 ID=cds-WP_211180506.1;Parent=gene-AD11_RS32705;Dbxref=GenBank:WP_211180506.1;Name=WP_211180506.1;gbkey=CDS;gene=yqgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AD11_RS32705;product=protein YqgH;protein_id=WP_211180506.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 212970 213677 . + . ID=gene-AD11_RS19625;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AD11_RS19625;old_locus_tag=AD11_3329 NZ_JJLL01000147.1 Protein Homology CDS 212970 213677 . + 0 ID=cds-WP_000234514.1;Parent=gene-AD11_RS19625;Dbxref=GenBank:WP_000234514.1;Name=WP_000234514.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AD11_RS19625;product=DUF554 domain-containing protein;protein_id=WP_000234514.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 213783 213858 . + . ID=gene-AD11_RS19630;Name=AD11_RS19630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS19630;old_locus_tag=AD11_3330 NZ_JJLL01000147.1 tRNAscan-SE tRNA 213783 213858 . + . ID=rna-AD11_RS19630;Parent=gene-AD11_RS19630;anticodon=(pos:213816..213818);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS19630;product=tRNA-Phe NZ_JJLL01000147.1 tRNAscan-SE exon 213783 213858 . + . ID=exon-AD11_RS19630-1;Parent=rna-AD11_RS19630;anticodon=(pos:213816..213818);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS19630;product=tRNA-Phe NZ_JJLL01000147.1 RefSeq gene 214007 214543 . - . ID=gene-AD11_RS19635;Name=yghD;gbkey=Gene;gene=yghD;gene_biotype=protein_coding;locus_tag=AD11_RS19635;old_locus_tag=AD11_3331 NZ_JJLL01000147.1 Protein Homology CDS 214007 214543 . - 0 ID=cds-WP_033865733.1;Parent=gene-AD11_RS19635;Dbxref=GenBank:WP_033865733.1;Name=WP_033865733.1;gbkey=CDS;gene=yghD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417442.1;locus_tag=AD11_RS19635;product=GspM family type II secretion system protein YghD;protein_id=WP_033865733.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 214545 215723 . - . ID=gene-AD11_RS19640;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AD11_RS19640;old_locus_tag=AD11_3332 NZ_JJLL01000147.1 Protein Homology CDS 214545 215723 . - 0 ID=cds-WP_033866506.1;Parent=gene-AD11_RS19640;Dbxref=GenBank:WP_033866506.1;Name=WP_033866506.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000097227.1;locus_tag=AD11_RS19640;product=type II secretion system protein GspL;protein_id=WP_033866506.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 215720 216697 . - . ID=gene-AD11_RS19645;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AD11_RS19645;old_locus_tag=AD11_3333 NZ_JJLL01000147.1 Protein Homology CDS 215720 216697 . - 0 ID=cds-WP_000633209.1;Parent=gene-AD11_RS19645;Dbxref=GenBank:WP_000633209.1;Name=WP_000633209.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554494.1;locus_tag=AD11_RS19645;product=type II secretion system minor pseudopilin GspK;protein_id=WP_000633209.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 216700 217299 . - . ID=gene-AD11_RS19650;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AD11_RS19650;old_locus_tag=AD11_3334 NZ_JJLL01000147.1 Protein Homology CDS 216700 217299 . - 0 ID=cds-WP_033865737.1;Parent=gene-AD11_RS19650;Dbxref=GenBank:WP_033865737.1;Name=WP_033865737.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691118.1;locus_tag=AD11_RS19650;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_033865737.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 217296 217667 . - . ID=gene-AD11_RS19655;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AD11_RS19655;old_locus_tag=AD11_3335 NZ_JJLL01000147.1 Protein Homology CDS 217296 217667 . - 0 ID=cds-WP_000820113.1;Parent=gene-AD11_RS19655;Dbxref=GenBank:WP_000820113.1;Name=WP_000820113.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001709020.1;locus_tag=AD11_RS19655;product=type II secretion system minor pseudopilin GspI;protein_id=WP_000820113.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 217664 218227 . - . ID=gene-AD11_RS19660;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AD11_RS19660;old_locus_tag=AD11_3336 NZ_JJLL01000147.1 Protein Homology CDS 217664 218227 . - 0 ID=cds-WP_001115154.1;Parent=gene-AD11_RS19660;Dbxref=GenBank:WP_001115154.1;Name=WP_001115154.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394829.1;locus_tag=AD11_RS19660;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001115154.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 218231 218686 . - . ID=gene-AD11_RS19665;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AD11_RS19665;old_locus_tag=AD11_3337 NZ_JJLL01000147.1 Protein Homology CDS 218231 218686 . - 0 ID=cds-WP_001087289.1;Parent=gene-AD11_RS19665;Dbxref=GenBank:WP_001087289.1;Name=WP_001087289.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003912123.1;locus_tag=AD11_RS19665;product=type II secretion system major pseudopilin GspG;protein_id=WP_001087289.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 218703 219926 . - . ID=gene-AD11_RS19670;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AD11_RS19670;old_locus_tag=AD11_3338 NZ_JJLL01000147.1 Protein Homology CDS 218703 219926 . - 0 ID=cds-WP_001173458.1;Parent=gene-AD11_RS19670;Dbxref=GenBank:WP_001173458.1;Name=WP_001173458.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001173399.1;locus_tag=AD11_RS19670;product=type II secretion system inner membrane protein GspF;protein_id=WP_001173458.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 219926 221419 . - . ID=gene-AD11_RS19675;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD11_RS19675;old_locus_tag=AD11_3339 NZ_JJLL01000147.1 Protein Homology CDS 219926 221419 . - 0 ID=cds-WP_000249348.1;Parent=gene-AD11_RS19675;Dbxref=GenBank:WP_000249348.1;Name=WP_000249348.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001525635.1;locus_tag=AD11_RS19675;product=type II secretion system ATPase GspE;protein_id=WP_000249348.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 221419 223479 . - . ID=gene-AD11_RS19680;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AD11_RS19680;old_locus_tag=AD11_3340 NZ_JJLL01000147.1 Protein Homology CDS 221419 223479 . - 0 ID=cds-WP_000498840.1;Parent=gene-AD11_RS19680;Dbxref=GenBank:WP_000498840.1;Name=WP_000498840.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234996.1;locus_tag=AD11_RS19680;product=type II secretion system secretin GspD;protein_id=WP_000498840.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 223509 224468 . - . ID=gene-AD11_RS19685;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AD11_RS19685;old_locus_tag=AD11_3341 NZ_JJLL01000147.1 Protein Homology CDS 223509 224468 . - 0 ID=cds-WP_024193427.1;Parent=gene-AD11_RS19685;Dbxref=GenBank:WP_024193427.1;Name=WP_024193427.1;gbkey=CDS;gene=gspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239656.1;locus_tag=AD11_RS19685;product=type II secretion system protein GspC;protein_id=WP_024193427.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 224486 224896 . - . ID=gene-AD11_RS19690;Name=gspS2;gbkey=Gene;gene=gspS2;gene_biotype=protein_coding;locus_tag=AD11_RS19690;old_locus_tag=AD11_3342 NZ_JJLL01000147.1 Protein Homology CDS 224486 224896 . - 0 ID=cds-WP_001298744.1;Parent=gene-AD11_RS19690;Dbxref=GenBank:WP_001298744.1;Name=WP_001298744.1;gbkey=CDS;gene=gspS2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417445.1;locus_tag=AD11_RS19690;product=type II secretion system pilot lipoprotein GspS-beta;protein_id=WP_001298744.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 224962 225771 . - . ID=gene-AD11_RS19695;Name=pppA;gbkey=Gene;gene=pppA;gene_biotype=protein_coding;locus_tag=AD11_RS19695;old_locus_tag=AD11_3343 NZ_JJLL01000147.1 Protein Homology CDS 224962 225771 . - 0 ID=cds-WP_001618846.1;Parent=gene-AD11_RS19695;Dbxref=GenBank:WP_001618846.1;Name=WP_001618846.1;gbkey=CDS;gene=pppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417446.4;locus_tag=AD11_RS19695;product=prepilin peptidase PppA;protein_id=WP_001618846.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 225969 230537 . - . ID=gene-AD11_RS19700;Name=sslE;gbkey=Gene;gene=sslE;gene_biotype=protein_coding;locus_tag=AD11_RS19700;old_locus_tag=AD11_3344 NZ_JJLL01000147.1 Protein Homology CDS 225969 230537 . - 0 ID=cds-WP_001547021.1;Parent=gene-AD11_RS19700;Dbxref=GenBank:WP_001547021.1;Name=WP_001547021.1;gbkey=CDS;gene=sslE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026189.1;locus_tag=AD11_RS19700;product=lipoprotein metalloprotease SslE;protein_id=WP_001547021.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 231022 232704 . - . ID=gene-AD11_RS19710;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;locus_tag=AD11_RS19710;old_locus_tag=AD11_3346 NZ_JJLL01000147.1 Protein Homology CDS 231022 232704 . - 0 ID=cds-WP_000259302.1;Parent=gene-AD11_RS19710;Dbxref=GenBank:WP_000259302.1;Name=WP_000259302.1;gbkey=CDS;gene=glcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417449.1;locus_tag=AD11_RS19710;product=glycolate permease GlcA;protein_id=WP_000259302.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 233059 235230 . - . ID=gene-AD11_RS19715;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AD11_RS19715;old_locus_tag=AD11_3347 NZ_JJLL01000147.1 Protein Homology CDS 233059 235230 . - 0 ID=cds-WP_000084131.1;Parent=gene-AD11_RS19715;Dbxref=GenBank:WP_000084131.1;Name=WP_000084131.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417450.1;locus_tag=AD11_RS19715;product=malate synthase G;protein_id=WP_000084131.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 235252 235656 . - . ID=gene-AD11_RS19720;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;locus_tag=AD11_RS19720;old_locus_tag=AD11_3348 NZ_JJLL01000147.1 Protein Homology CDS 235252 235656 . - 0 ID=cds-WP_000853256.1;Parent=gene-AD11_RS19720;Dbxref=GenBank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;gene=glcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417451.1;locus_tag=AD11_RS19720;product=GlcG family protein;protein_id=WP_000853256.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 235661 236884 . - . ID=gene-AD11_RS19725;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=AD11_RS19725;old_locus_tag=AD11_3349 NZ_JJLL01000147.1 Protein Homology CDS 235661 236884 . - 0 ID=cds-WP_001194661.1;Parent=gene-AD11_RS19725;Dbxref=GenBank:WP_001194661.1;Name=WP_001194661.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026190.1;locus_tag=AD11_RS19725;product=glycolate oxidase subunit GlcF;protein_id=WP_001194661.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 236895 237947 . - . ID=gene-AD11_RS19730;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=AD11_RS19730;old_locus_tag=AD11_3350 NZ_JJLL01000147.1 Protein Homology CDS 236895 237947 . - 0 ID=cds-WP_000943100.1;Parent=gene-AD11_RS19730;Dbxref=GenBank:WP_000943100.1;Name=WP_000943100.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026191.1;locus_tag=AD11_RS19730;product=glycolate oxidase subunit GlcE;protein_id=WP_000943100.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 237947 239446 . - . ID=gene-AD11_RS19735;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=AD11_RS19735;old_locus_tag=AD11_3351 NZ_JJLL01000147.1 Protein Homology CDS 237947 239446 . - 0 ID=cds-WP_000026117.1;Parent=gene-AD11_RS19735;Dbxref=GenBank:WP_000026117.1;Name=WP_000026117.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417453.1;locus_tag=AD11_RS19735;product=glycolate oxidase subunit GlcD;protein_id=WP_000026117.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 239697 240461 . + . ID=gene-AD11_RS19740;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=AD11_RS19740;old_locus_tag=AD11_3352 NZ_JJLL01000147.1 Protein Homology CDS 239697 240461 . + 0 ID=cds-WP_001297764.1;Parent=gene-AD11_RS19740;Dbxref=GenBank:WP_001297764.1;Name=WP_001297764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417454.1;locus_tag=AD11_RS19740;product=transcriptional regulator GlcC;protein_id=WP_001297764.1;transl_table=11 NZ_JJLL01000147.1 RefSeq gene 240468 241592 . - . ID=gene-AD11_RS19745;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=protein_coding;locus_tag=AD11_RS19745;old_locus_tag=AD11_3353 NZ_JJLL01000147.1 Protein Homology CDS 240468 241592 . - 0 ID=cds-WP_000590165.1;Parent=gene-AD11_RS19745;Dbxref=GenBank:WP_000590165.1;Name=WP_000590165.1;gbkey=CDS;gene=yghO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357659.1;locus_tag=AD11_RS19745;product=protein YghO;protein_id=WP_000590165.1;transl_table=11 NZ_JJLL01000147.1 RefSeq pseudogene 241654 242236 . + . ID=gene-AD11_RS19755;Name=AD11_RS19755;end_range=242236,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19755;old_locus_tag=AD11_3354;partial=true;pseudo=true NZ_JJLL01000147.1 Protein Homology CDS 241654 242236 . + 0 ID=cds-AD11_RS19755;Parent=gene-AD11_RS19755;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=242236,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS19755;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000148.1 1 5352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000148.1 RefSeq region 1 5352 . + . ID=NZ_JJLL01000148.1:1..5352;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000148.1 RefSeq pseudogene 1 423 . + . ID=gene-AD11_RS19765;Name=AD11_RS19765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19765;old_locus_tag=AD11_3355;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000148.1 Protein Homology CDS 1 423 . + 0 ID=cds-AD11_RS19765;Parent=gene-AD11_RS19765;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS19765;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000148.1 RefSeq pseudogene 439 894 . + . ID=gene-AD11_RS19770;Name=AD11_RS19770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19770;partial=true;pseudo=true;start_range=.,439 NZ_JJLL01000148.1 Protein Homology CDS 439 894 . + 0 ID=cds-AD11_RS19770;Parent=gene-AD11_RS19770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723802.1;locus_tag=AD11_RS19770;partial=true;product=fimbrial protein;pseudo=true;start_range=.,439;transl_table=11 NZ_JJLL01000148.1 RefSeq gene 969 1472 . + . ID=gene-AD11_RS19775;Name=papF;gbkey=Gene;gene=papF;gene_biotype=protein_coding;locus_tag=AD11_RS19775;old_locus_tag=AD11_3356 NZ_JJLL01000148.1 Protein Homology CDS 969 1472 . + 0 ID=cds-WP_033865579.1;Parent=gene-AD11_RS19775;Dbxref=GenBank:WP_033865579.1;Name=WP_033865579.1;gbkey=CDS;gene=papF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_042092232.1;locus_tag=AD11_RS19775;product=P fimbrial tip protein PapF;protein_id=WP_033865579.1;transl_table=11 NZ_JJLL01000148.1 RefSeq pseudogene 1516 2132 . + . ID=gene-AD11_RS32940;Name=AD11_RS32940;end_range=2132,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32940;partial=true;pseudo=true NZ_JJLL01000148.1 Protein Homology CDS 1516 2132 . + 0 ID=cds-AD11_RS32940;Parent=gene-AD11_RS32940;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0007155,GO:0030246;end_range=2132,.;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF015583.6;locus_tag=AD11_RS32940;partial=true;product=PapG carbohydrate binding domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000148.1 RefSeq gene 2136 2522 . + . ID=gene-AD11_RS32945;Name=AD11_RS32945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32945 NZ_JJLL01000148.1 Protein Homology CDS 2136 2522 . + 0 ID=cds-WP_244405822.1;Parent=gene-AD11_RS32945;Dbxref=GenBank:WP_244405822.1;Name=WP_244405822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048321.1;locus_tag=AD11_RS32945;product=PapG chaperone-binding domain-containing protein;protein_id=WP_244405822.1;transl_table=11 NZ_JJLL01000148.1 RefSeq pseudogene 2661 3826 . + . ID=gene-AD11_RS31750;Name=AD11_RS31750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31750;pseudo=true NZ_JJLL01000148.1 Protein Homology CDS 2661 3826 . + 0 ID=cds-AD11_RS31750;Parent=gene-AD11_RS31750;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=AD11_RS31750;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000148.1 RefSeq gene 3993 4544 . + . ID=gene-AD11_RS19800;Name=AD11_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS19800;old_locus_tag=AD11_3361 NZ_JJLL01000148.1 Protein Homology CDS 3993 4544 . + 0 ID=cds-WP_001447126.1;Parent=gene-AD11_RS19800;Dbxref=GenBank:WP_001447126.1;Name=WP_001447126.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298062.1;locus_tag=AD11_RS19800;product=MarR family transcriptional regulator;protein_id=WP_001447126.1;transl_table=11 NZ_JJLL01000148.1 RefSeq pseudogene 5011 5352 . - . ID=gene-AD11_RS19805;Name=AD11_RS19805;end_range=5352,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19805;old_locus_tag=AD11_3362;partial=true;pseudo=true NZ_JJLL01000148.1 Protein Homology CDS 5011 5352 . - 0 ID=cds-AD11_RS19805;Parent=gene-AD11_RS19805;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5352,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS19805;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000149.1 1 288213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000149.1 RefSeq region 1 288213 . + . ID=NZ_JJLL01000149.1:1..288213;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000149.1 RefSeq pseudogene 1 342 . + . ID=gene-AD11_RS19810;Name=AD11_RS19810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS19810;old_locus_tag=AD11_3363;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000149.1 Protein Homology CDS 1 342 . + 0 ID=cds-AD11_RS19810;Parent=gene-AD11_RS19810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS19810;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 412 2271 . - . ID=gene-AD11_RS19815;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AD11_RS19815;old_locus_tag=AD11_3364 NZ_JJLL01000149.1 Protein Homology CDS 412 2271 . - 0 ID=cds-WP_032201383.1;Parent=gene-AD11_RS19815;Dbxref=GenBank:WP_032201383.1;Name=WP_032201383.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AD11_RS19815;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_032201383.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 2476 3342 . + . ID=gene-AD11_RS19820;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AD11_RS19820;old_locus_tag=AD11_3365 NZ_JJLL01000149.1 Protein Homology CDS 2476 3342 . + 0 ID=cds-WP_001295515.1;Parent=gene-AD11_RS19820;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AD11_RS19820;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 3465 3713 . - . ID=gene-AD11_RS19825;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AD11_RS19825;old_locus_tag=AD11_3366 NZ_JJLL01000149.1 Protein Homology CDS 3465 3713 . - 0 ID=cds-WP_000334896.1;Parent=gene-AD11_RS19825;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AD11_RS19825;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 3726 4067 . - . ID=gene-AD11_RS19830;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AD11_RS19830;old_locus_tag=AD11_3367 NZ_JJLL01000149.1 Protein Homology CDS 3726 4067 . - 0 ID=cds-WP_000544952.1;Parent=gene-AD11_RS19830;Dbxref=GenBank:WP_000544952.1;Name=WP_000544952.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AD11_RS19830;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544952.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 4060 4548 . - . ID=gene-AD11_RS19835;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AD11_RS19835;old_locus_tag=AD11_3368 NZ_JJLL01000149.1 Protein Homology CDS 4060 4548 . - 0 ID=cds-WP_000134014.1;Parent=gene-AD11_RS19835;Dbxref=GenBank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AD11_RS19835;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 4541 5035 . - . ID=gene-AD11_RS19840;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AD11_RS19840;old_locus_tag=AD11_3369 NZ_JJLL01000149.1 Protein Homology CDS 4541 5035 . - 0 ID=cds-WP_001221946.1;Parent=gene-AD11_RS19840;Dbxref=GenBank:WP_001221946.1;Name=WP_001221946.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708811.1;locus_tag=AD11_RS19840;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221946.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 5035 6738 . - . ID=gene-AD11_RS19845;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AD11_RS19845;old_locus_tag=AD11_3370 NZ_JJLL01000149.1 Protein Homology CDS 5035 6738 . - 0 ID=cds-WP_000083065.1;Parent=gene-AD11_RS19845;Dbxref=GenBank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AD11_RS19845;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 6735 7913 . - . ID=gene-AD11_RS19850;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AD11_RS19850;old_locus_tag=AD11_3371 NZ_JJLL01000149.1 Protein Homology CDS 6735 7913 . - 0 ID=cds-WP_000017703.1;Parent=gene-AD11_RS19850;Dbxref=GenBank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AD11_RS19850;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 7903 8889 . - . ID=gene-AD11_RS19855;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AD11_RS19855;old_locus_tag=AD11_3372 NZ_JJLL01000149.1 Protein Homology CDS 7903 8889 . - 0 ID=cds-WP_001081870.1;Parent=gene-AD11_RS19855;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AD11_RS19855;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 8892 10010 . - . ID=gene-AD11_RS19860;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AD11_RS19860;old_locus_tag=AD11_3373 NZ_JJLL01000149.1 Protein Homology CDS 8892 10010 . - 0 ID=cds-WP_000145410.1;Parent=gene-AD11_RS19860;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AD11_RS19860;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 10199 10486 . - . ID=gene-AD11_RS19870;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AD11_RS19870;old_locus_tag=AD11_3375 NZ_JJLL01000149.1 Protein Homology CDS 10199 10486 . - 0 ID=cds-WP_001059136.1;Parent=gene-AD11_RS19870;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AD11_RS19870;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11 NZ_JJLL01000149.1 RefSeq pseudogene 10605 11490 . - . ID=gene-AD11_RS19875;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=pseudogene;locus_tag=AD11_RS19875;old_locus_tag=AD11_3376;pseudo=true NZ_JJLL01000149.1 Protein Homology CDS 10605 11490 . - 0 ID=cds-AD11_RS19875;Parent=gene-AD11_RS19875;Note=frameshifted;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AD11_RS19875;product=YghX family hydrolase;pseudo=true;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 11647 12687 . + . ID=gene-AD11_RS19880;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AD11_RS19880;old_locus_tag=AD11_3378 NZ_JJLL01000149.1 Protein Homology CDS 11647 12687 . + 0 ID=cds-WP_000262172.1;Parent=gene-AD11_RS19880;Dbxref=GenBank:WP_000262172.1;Name=WP_000262172.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417474.1;locus_tag=AD11_RS19880;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262172.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 12727 13221 . - . ID=gene-AD11_RS19885;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=AD11_RS19885;old_locus_tag=AD11_3379 NZ_JJLL01000149.1 Protein Homology CDS 12727 13221 . - 0 ID=cds-WP_000439331.1;Parent=gene-AD11_RS19885;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AD11_RS19885;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 13412 14296 . + . ID=gene-AD11_RS19890;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AD11_RS19890;old_locus_tag=AD11_3380 NZ_JJLL01000149.1 Protein Homology CDS 13412 14296 . + 0 ID=cds-WP_000018760.1;Parent=gene-AD11_RS19890;Dbxref=GenBank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AD11_RS19890;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 14568 14993 . - . ID=gene-AD11_RS19895;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AD11_RS19895;old_locus_tag=AD11_3381 NZ_JJLL01000149.1 Protein Homology CDS 14568 14993 . - 0 ID=cds-WP_032084093.1;Parent=gene-AD11_RS19895;Dbxref=GenBank:WP_032084093.1;Name=WP_032084093.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AD11_RS19895;product=TonB system transport protein ExbD;protein_id=WP_032084093.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 15000 15734 . - . ID=gene-AD11_RS19900;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AD11_RS19900;old_locus_tag=AD11_3382 NZ_JJLL01000149.1 Protein Homology CDS 15000 15734 . - 0 ID=cds-WP_000527844.1;Parent=gene-AD11_RS19900;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AD11_RS19900;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 15986 17173 . + . ID=gene-AD11_RS19910;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AD11_RS19910;old_locus_tag=AD11_3383 NZ_JJLL01000149.1 Protein Homology CDS 15986 17173 . + 0 ID=cds-WP_001320425.1;Parent=gene-AD11_RS19910;Dbxref=GenBank:WP_001320425.1;Name=WP_001320425.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311919.1;locus_tag=AD11_RS19910;product=cystathionine beta-lyase;protein_id=WP_001320425.1;transl_table=11 NZ_JJLL01000149.1 RefSeq pseudogene 17313 17973 . + . ID=gene-AD11_RS19915;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=pseudogene;locus_tag=AD11_RS19915;old_locus_tag=AD11_3384;pseudo=true NZ_JJLL01000149.1 Protein Homology CDS 17313 17973 . + 0 ID=cds-AD11_RS19915;Parent=gene-AD11_RS19915;Note=frameshifted;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AD11_RS19915;product=DedA family general envelope maintenance protein YghB;pseudo=true;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 18013 18912 . - . ID=gene-AD11_RS19920;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AD11_RS19920;old_locus_tag=AD11_3385 NZ_JJLL01000149.1 Protein Homology CDS 18013 18912 . - 0 ID=cds-WP_001298382.1;Parent=gene-AD11_RS19920;Dbxref=GenBank:WP_001298382.1;Name=WP_001298382.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AD11_RS19920;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_001298382.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 19106 20269 . + . ID=gene-AD11_RS19930;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AD11_RS19930;old_locus_tag=AD11_3387 NZ_JJLL01000149.1 Protein Homology CDS 19106 20269 . + 0 ID=cds-WP_001058802.1;Parent=gene-AD11_RS19930;Dbxref=GenBank:WP_001058802.1;Name=WP_001058802.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AD11_RS19930;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 20374 21201 . + . ID=gene-AD11_RS19935;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AD11_RS19935;old_locus_tag=AD11_3388 NZ_JJLL01000149.1 Protein Homology CDS 20374 21201 . + 0 ID=cds-WP_000013149.1;Parent=gene-AD11_RS19935;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AD11_RS19935;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 21401 22327 . + . ID=gene-AD11_RS19940;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=AD11_RS19940;old_locus_tag=AD11_3389 NZ_JJLL01000149.1 Protein Homology CDS 21401 22327 . + 0 ID=cds-WP_000691619.1;Parent=gene-AD11_RS19940;Dbxref=GenBank:WP_000691619.1;Name=WP_000691619.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AD11_RS19940;product=YbjP/YqhG family protein;protein_id=WP_000691619.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 22378 22635 . + . ID=gene-AD11_RS19945;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AD11_RS19945;old_locus_tag=AD11_3390 NZ_JJLL01000149.1 Protein Homology CDS 22378 22635 . + 0 ID=cds-WP_000848528.1;Parent=gene-AD11_RS19945;Dbxref=GenBank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AD11_RS19945;product=lipoprotein YqhH;protein_id=WP_000848528.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 22678 24897 . - . ID=gene-AD11_RS19950;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=AD11_RS19950;old_locus_tag=AD11_3391 NZ_JJLL01000149.1 Protein Homology CDS 22678 24897 . - 0 ID=cds-WP_000095187.1;Parent=gene-AD11_RS19950;Dbxref=GenBank:WP_000095187.1;Name=WP_000095187.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AD11_RS19950;product=YgiQ family radical SAM protein;protein_id=WP_000095187.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 25008 26420 . - . ID=gene-AD11_RS19955;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AD11_RS19955;old_locus_tag=AD11_3392 NZ_JJLL01000149.1 Protein Homology CDS 25008 26420 . - 0 ID=cds-WP_000059388.1;Parent=gene-AD11_RS19955;Dbxref=GenBank:WP_000059388.1;Name=WP_000059388.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417489.1;locus_tag=AD11_RS19955;product=cell division protein FtsP;protein_id=WP_000059388.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 26495 27232 . - . ID=gene-AD11_RS19960;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AD11_RS19960;old_locus_tag=AD11_3393 NZ_JJLL01000149.1 Protein Homology CDS 26495 27232 . - 0 ID=cds-WP_000965722.1;Parent=gene-AD11_RS19960;Dbxref=GenBank:WP_000965722.1;Name=WP_000965722.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417490.1;locus_tag=AD11_RS19960;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965722.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 27466 29724 . - . ID=gene-AD11_RS19965;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AD11_RS19965;old_locus_tag=AD11_3394 NZ_JJLL01000149.1 Protein Homology CDS 27466 29724 . - 0 ID=cds-WP_001618856.1;Parent=gene-AD11_RS19965;Dbxref=GenBank:WP_001618856.1;Name=WP_001618856.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AD11_RS19965;product=DNA topoisomerase IV subunit A;protein_id=WP_001618856.1;transl_table=11 NZ_JJLL01000149.1 RefSeq pseudogene 29862 31413 . - . ID=gene-AD11_RS19970;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=pseudogene;locus_tag=AD11_RS19970;old_locus_tag=AD11_3396;pseudo=true NZ_JJLL01000149.1 Protein Homology CDS 29862 31413 . - 0 ID=cds-AD11_RS19970;Parent=gene-AD11_RS19970;Note=frameshifted;gbkey=CDS;gene=ygiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AD11_RS19970;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 31546 31941 . - . ID=gene-AD11_RS19975;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AD11_RS19975;old_locus_tag=AD11_3397 NZ_JJLL01000149.1 Protein Homology CDS 31546 31941 . - 0 ID=cds-WP_000650107.1;Parent=gene-AD11_RS19975;Dbxref=GenBank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AD11_RS19975;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 31943 32239 . - . ID=gene-AD11_RS19980;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AD11_RS19980 NZ_JJLL01000149.1 Protein Homology CDS 31943 32239 . - 0 ID=cds-WP_000415584.1;Parent=gene-AD11_RS19980;Dbxref=GenBank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AD11_RS19980;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 32444 32926 . - . ID=gene-AD11_RS19985;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=protein_coding;locus_tag=AD11_RS19985;old_locus_tag=AD11_3398 NZ_JJLL01000149.1 Protein Homology CDS 32444 32926 . - 0 ID=cds-WP_000183505.1;Parent=gene-AD11_RS19985;Dbxref=GenBank:WP_000183505.1;Name=WP_000183505.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;gene=ygiV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026197.1;locus_tag=AD11_RS19985;product=AraC family transcriptional regulator;protein_id=WP_000183505.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 32979 33371 . - . ID=gene-AD11_RS19990;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AD11_RS19990;old_locus_tag=AD11_3399 NZ_JJLL01000149.1 Protein Homology CDS 32979 33371 . - 0 ID=cds-WP_000712658.1;Parent=gene-AD11_RS19990;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AD11_RS19990;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 33523 34182 . + . ID=gene-AD11_RS19995;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AD11_RS19995;old_locus_tag=AD11_3400 NZ_JJLL01000149.1 Protein Homology CDS 33523 34182 . + 0 ID=cds-WP_001221493.1;Parent=gene-AD11_RS19995;Dbxref=GenBank:WP_001221493.1;Name=WP_001221493.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AD11_RS19995;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221493.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 34179 35528 . + . ID=gene-AD11_RS20000;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AD11_RS20000;old_locus_tag=AD11_3401 NZ_JJLL01000149.1 Protein Homology CDS 34179 35528 . + 0 ID=cds-WP_001618857.1;Parent=gene-AD11_RS20000;Dbxref=GenBank:WP_001618857.1;Name=WP_001618857.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AD11_RS20000;product=quorum sensing histidine kinase QseC;protein_id=WP_001618857.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 35574 35906 . - . ID=gene-AD11_RS20005;Name=ygiZ;gbkey=Gene;gene=ygiZ;gene_biotype=protein_coding;locus_tag=AD11_RS20005 NZ_JJLL01000149.1 Protein Homology CDS 35574 35906 . - 0 ID=cds-WP_000917684.1;Parent=gene-AD11_RS20005;Dbxref=GenBank:WP_000917684.1;Name=WP_000917684.1;gbkey=CDS;gene=ygiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417499.1;locus_tag=AD11_RS20005;product=DUF2645 family protein;protein_id=WP_000917684.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 36225 36806 . + . ID=gene-AD11_RS20010;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AD11_RS20010;old_locus_tag=AD11_3402 NZ_JJLL01000149.1 Protein Homology CDS 36225 36806 . + 0 ID=cds-WP_000065430.1;Parent=gene-AD11_RS20010;Dbxref=GenBank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AD11_RS20010;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 36837 37151 . + . ID=gene-AD11_RS20015;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=AD11_RS20015;old_locus_tag=AD11_3403 NZ_JJLL01000149.1 Protein Homology CDS 36837 37151 . + 0 ID=cds-WP_000958598.1;Parent=gene-AD11_RS20015;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;gene=ygiN;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AD11_RS20015;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 37199 39091 . - . ID=gene-AD11_RS20020;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AD11_RS20020;old_locus_tag=AD11_3404 NZ_JJLL01000149.1 Protein Homology CDS 37199 39091 . - 0 ID=cds-WP_000195296.1;Parent=gene-AD11_RS20020;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AD11_RS20020;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 39120 39701 . - . ID=gene-AD11_RS20025;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AD11_RS20025;old_locus_tag=AD11_3405 NZ_JJLL01000149.1 Protein Homology CDS 39120 39701 . - 0 ID=cds-WP_000105733.1;Parent=gene-AD11_RS20025;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AD11_RS20025;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 39701 40528 . - . ID=gene-AD11_RS20030;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AD11_RS20030;old_locus_tag=AD11_3406 NZ_JJLL01000149.1 Protein Homology CDS 39701 40528 . - 0 ID=cds-WP_000444752.1;Parent=gene-AD11_RS20030;Dbxref=GenBank:WP_000444752.1;Name=WP_000444752.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AD11_RS20030;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444752.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 40553 40975 . - . ID=gene-AD11_RS20035;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=AD11_RS20035;old_locus_tag=AD11_3407 NZ_JJLL01000149.1 Protein Homology CDS 40553 40975 . - 0 ID=cds-WP_000833393.1;Parent=gene-AD11_RS20035;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;gene=yqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AD11_RS20035;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 40976 41605 . - . ID=gene-AD11_RS20040;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AD11_RS20040;old_locus_tag=AD11_3408 NZ_JJLL01000149.1 Protein Homology CDS 40976 41605 . - 0 ID=cds-WP_001647507.1;Parent=gene-AD11_RS20040;Dbxref=GenBank:WP_001647507.1;Name=WP_001647507.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AD11_RS20040;product=ADP-ribose diphosphatase;protein_id=WP_001647507.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 41810 43291 . + . ID=gene-AD11_RS20045;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AD11_RS20045;old_locus_tag=AD11_3409 NZ_JJLL01000149.1 Protein Homology CDS 41810 43291 . + 0 ID=cds-WP_000735278.1;Parent=gene-AD11_RS20045;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AD11_RS20045;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 43439 44110 . + . ID=gene-AD11_RS20055;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=AD11_RS20055;old_locus_tag=AD11_3410 NZ_JJLL01000149.1 Protein Homology CDS 43439 44110 . + 0 ID=cds-WP_033865745.1;Parent=gene-AD11_RS20055;Dbxref=GenBank:WP_033865745.1;Name=WP_033865745.1;gbkey=CDS;gene=ygiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AD11_RS20055;product=DUF1190 family protein;protein_id=WP_033865745.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 44116 45276 . + . ID=gene-AD11_RS20060;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=AD11_RS20060;old_locus_tag=AD11_3411 NZ_JJLL01000149.1 Protein Homology CDS 44116 45276 . + 0 ID=cds-WP_000442860.1;Parent=gene-AD11_RS20060;Dbxref=GenBank:WP_000442860.1;Name=WP_000442860.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=ygiC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AD11_RS20060;product=glutathionylspermidine synthase family protein;protein_id=WP_000442860.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 45314 46102 . - . ID=gene-AD11_RS20065;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AD11_RS20065;old_locus_tag=AD11_3412 NZ_JJLL01000149.1 Protein Homology CDS 45314 46102 . - 0 ID=cds-WP_001320780.1;Parent=gene-AD11_RS20065;Dbxref=GenBank:WP_001320780.1;Name=WP_001320780.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AD11_RS20065;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_001320780.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 46245 47018 . + . ID=gene-AD11_RS20070;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AD11_RS20070;old_locus_tag=AD11_3413 NZ_JJLL01000149.1 Protein Homology CDS 46245 47018 . + 0 ID=cds-WP_001295627.1;Parent=gene-AD11_RS20070;Dbxref=GenBank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AD11_RS20070;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 47076 47246 . - . ID=gene-AD11_RS32135;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AD11_RS32135;old_locus_tag=AD11_3414 NZ_JJLL01000149.1 Protein Homology CDS 47076 47246 . - 0 ID=cds-WP_000469266.1;Parent=gene-AD11_RS32135;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AD11_RS32135;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 47508 48161 . - . ID=gene-AD11_RS20080;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AD11_RS20080;old_locus_tag=AD11_3415 NZ_JJLL01000149.1 Protein Homology CDS 47508 48161 . - 0 ID=cds-WP_001076997.1;Parent=gene-AD11_RS20080;Dbxref=GenBank:WP_001076997.1;Name=WP_001076997.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AD11_RS20080;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11 NZ_JJLL01000149.1 cmsearch riboswitch 48265 48413 . - . ID=id-NZ_JJLL01000149.1:48265..48413;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLL01000149.1 RefSeq gene 48535 48825 . + . ID=gene-AD11_RS20085;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AD11_RS20085;old_locus_tag=AD11_3416 NZ_JJLL01000149.1 Protein Homology CDS 48535 48825 . + 0 ID=cds-WP_001295626.1;Parent=gene-AD11_RS20085;Dbxref=GenBank:WP_001295626.1;Name=WP_001295626.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AD11_RS20085;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001295626.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 49109 49660 . + . ID=gene-AD11_RS20090;Name=ygiL;gbkey=Gene;gene=ygiL;gene_biotype=protein_coding;locus_tag=AD11_RS20090;old_locus_tag=AD11_3417 NZ_JJLL01000149.1 Protein Homology CDS 49109 49660 . + 0 ID=cds-WP_001272145.1;Parent=gene-AD11_RS20090;Dbxref=GenBank:WP_001272145.1;Name=WP_001272145.1;gbkey=CDS;gene=ygiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=AD11_RS20090;product=fimbrial-like protein;protein_id=WP_001272145.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 49720 52224 . + . ID=gene-AD11_RS20095;Name=AD11_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS20095;old_locus_tag=AD11_3418 NZ_JJLL01000149.1 Protein Homology CDS 49720 52224 . + 0 ID=cds-WP_000277103.1;Parent=gene-AD11_RS20095;Dbxref=GenBank:WP_000277103.1;Name=WP_000277103.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AD11_RS20095;product=fimbria/pilus outer membrane usher protein;protein_id=WP_000277103.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 52240 52989 . + . ID=gene-AD11_RS20100;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;locus_tag=AD11_RS20100;old_locus_tag=AD11_3419 NZ_JJLL01000149.1 Protein Homology CDS 52240 52989 . + 0 ID=cds-WP_001269824.1;Parent=gene-AD11_RS20100;Dbxref=GenBank:WP_001269824.1;Name=WP_001269824.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yqiH;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=AD11_RS20100;product=fimbrial biogenesis chaperone;protein_id=WP_001269824.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 52991 54055 . + . ID=gene-AD11_RS20105;Name=yqiI;gbkey=Gene;gene=yqiI;gene_biotype=protein_coding;locus_tag=AD11_RS20105;old_locus_tag=AD11_3420 NZ_JJLL01000149.1 Protein Homology CDS 52991 54055 . + 0 ID=cds-WP_001269802.1;Parent=gene-AD11_RS20105;Dbxref=GenBank:WP_001269802.1;Name=WP_001269802.1;gbkey=CDS;gene=yqiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=AD11_RS20105;product=fimbrial protein;protein_id=WP_001269802.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 54098 54298 . - . ID=gene-AD11_RS20110;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AD11_RS20110;old_locus_tag=AD11_3421 NZ_JJLL01000149.1 Protein Homology CDS 54098 54298 . - 0 ID=cds-WP_000350095.1;Parent=gene-AD11_RS20110;Dbxref=GenBank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AD11_RS20110;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 54567 55196 . + . ID=gene-AD11_RS20115;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;locus_tag=AD11_RS20115;old_locus_tag=AD11_3422 NZ_JJLL01000149.1 Protein Homology CDS 54567 55196 . + 0 ID=cds-WP_000599926.1;Parent=gene-AD11_RS20115;Dbxref=GenBank:WP_000599926.1;Name=WP_000599926.1;gbkey=CDS;gene=yqiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AD11_RS20115;product=OB-fold-containig protein;protein_id=WP_000599926.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 55223 56884 . + . ID=gene-AD11_RS20120;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=AD11_RS20120;old_locus_tag=AD11_3423 NZ_JJLL01000149.1 Protein Homology CDS 55223 56884 . + 0 ID=cds-WP_001311137.1;Parent=gene-AD11_RS20120;Dbxref=GenBank:WP_001311137.1;Name=WP_001311137.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;gene=yqiK;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AD11_RS20120;product=flotillin family protein;protein_id=WP_001311137.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 57125 57184 . + . ID=gene-AD11_RS31755;Name=AD11_RS31755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31755 NZ_JJLL01000149.1 Protein Homology CDS 57125 57184 . + 0 ID=cds-WP_001387081.1;Parent=gene-AD11_RS31755;Dbxref=GenBank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AD11_RS31755;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 57500 57559 . + . ID=gene-AD11_RS31760;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AD11_RS31760 NZ_JJLL01000149.1 Protein Homology CDS 57500 57559 . + 0 ID=cds-WP_001387082.1-2;Parent=gene-AD11_RS31760;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AD11_RS31760;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 57679 59112 . - . ID=gene-AD11_RS20135;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AD11_RS20135;old_locus_tag=AD11_3424 NZ_JJLL01000149.1 Protein Homology CDS 57679 59112 . - 0 ID=cds-WP_000869178.1;Parent=gene-AD11_RS20135;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AD11_RS20135;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 59160 62000 . - . ID=gene-AD11_RS20140;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AD11_RS20140;old_locus_tag=AD11_3425 NZ_JJLL01000149.1 Protein Homology CDS 59160 62000 . - 0 ID=cds-WP_001618860.1;Parent=gene-AD11_RS20140;Dbxref=GenBank:WP_001618860.1;Name=WP_001618860.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AD11_RS20140;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_001618860.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 62023 63324 . - . ID=gene-AD11_RS20145;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AD11_RS20145;old_locus_tag=AD11_3426 NZ_JJLL01000149.1 Protein Homology CDS 62023 63324 . - 0 ID=cds-WP_001618861.1;Parent=gene-AD11_RS20145;Dbxref=GenBank:WP_001618861.1;Name=WP_001618861.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311964.1;locus_tag=AD11_RS20145;product=inorganic triphosphatase;protein_id=WP_001618861.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 63566 64186 . + . ID=gene-AD11_RS20155;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AD11_RS20155;old_locus_tag=AD11_3428 NZ_JJLL01000149.1 Protein Homology CDS 63566 64186 . + 0 ID=cds-WP_001125326.1;Parent=gene-AD11_RS20155;Dbxref=GenBank:WP_001125326.1;Name=WP_001125326.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AD11_RS20155;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125326.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 64250 65488 . + . ID=gene-AD11_RS20160;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AD11_RS20160;old_locus_tag=AD11_3429 NZ_JJLL01000149.1 Protein Homology CDS 64250 65488 . + 0 ID=cds-WP_033865746.1;Parent=gene-AD11_RS20160;Dbxref=GenBank:WP_033865746.1;Name=WP_033865746.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AD11_RS20160;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_033865746.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 65669 66490 . - . ID=gene-AD11_RS20165;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AD11_RS20165;old_locus_tag=AD11_3430 NZ_JJLL01000149.1 Protein Homology CDS 65669 66490 . - 0 ID=cds-WP_001281927.1;Parent=gene-AD11_RS20165;Dbxref=GenBank:WP_001281927.1;Name=WP_001281927.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AD11_RS20165;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281927.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 66580 66948 . - . ID=gene-AD11_RS20170;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AD11_RS20170;old_locus_tag=AD11_3431 NZ_JJLL01000149.1 Protein Homology CDS 66580 66948 . - 0 ID=cds-WP_001295541.1;Parent=gene-AD11_RS20170;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AD11_RS20170;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 67053 67670 . + . ID=gene-AD11_RS20175;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AD11_RS20175;old_locus_tag=AD11_3432 NZ_JJLL01000149.1 Protein Homology CDS 67053 67670 . + 0 ID=cds-WP_001272796.1;Parent=gene-AD11_RS20175;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AD11_RS20175;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 67683 68615 . - . ID=gene-AD11_RS20180;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AD11_RS20180;old_locus_tag=AD11_3433 NZ_JJLL01000149.1 Protein Homology CDS 67683 68615 . - 0 ID=cds-WP_000935206.1;Parent=gene-AD11_RS20180;Dbxref=GenBank:WP_000935206.1;Name=WP_000935206.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AD11_RS20180;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_000935206.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 68822 69733 . + . ID=gene-AD11_RS20185;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AD11_RS20185;old_locus_tag=AD11_3434 NZ_JJLL01000149.1 Protein Homology CDS 68822 69733 . + 0 ID=cds-WP_000986797.1;Parent=gene-AD11_RS20185;Dbxref=GenBank:WP_000986797.1;Name=WP_000986797.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AD11_RS20185;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 69730 70335 . + . ID=gene-AD11_RS20190;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AD11_RS20190;old_locus_tag=AD11_3435 NZ_JJLL01000149.1 Protein Homology CDS 69730 70335 . + 0 ID=cds-WP_000722957.1;Parent=gene-AD11_RS20190;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AD11_RS20190;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 70383 71846 . + . ID=gene-AD11_RS20195;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AD11_RS20195;old_locus_tag=AD11_3436 NZ_JJLL01000149.1 Protein Homology CDS 70383 71846 . + 0 ID=cds-WP_000804973.1;Parent=gene-AD11_RS20195;Dbxref=GenBank:WP_000804973.1;Name=WP_000804973.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AD11_RS20195;product=L-tartrate/succinate antiporter;protein_id=WP_000804973.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 71889 72902 . - . ID=gene-AD11_RS20200;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AD11_RS20200;old_locus_tag=AD11_3437 NZ_JJLL01000149.1 Protein Homology CDS 71889 72902 . - 0 ID=cds-WP_001264352.1;Parent=gene-AD11_RS20200;Dbxref=GenBank:WP_001264352.1;Name=WP_001264352.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AD11_RS20200;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264352.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 73140 73355 . + . ID=gene-AD11_RS20205;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AD11_RS20205;old_locus_tag=AD11_3438 NZ_JJLL01000149.1 Protein Homology CDS 73140 73355 . + 0 ID=cds-WP_001144069.1;Parent=gene-AD11_RS20205;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AD11_RS20205;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 73466 75211 . + . ID=gene-AD11_RS20210;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AD11_RS20210;old_locus_tag=AD11_3439 NZ_JJLL01000149.1 Protein Homology CDS 73466 75211 . + 0 ID=cds-WP_000918827.1;Parent=gene-AD11_RS20210;Dbxref=GenBank:WP_000918827.1;Name=WP_000918827.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AD11_RS20210;product=DNA primase;protein_id=WP_000918827.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 75406 77247 . + . ID=gene-AD11_RS20215;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AD11_RS20215;old_locus_tag=AD11_3440 NZ_JJLL01000149.1 Protein Homology CDS 75406 77247 . + 0 ID=cds-WP_000437375.1;Parent=gene-AD11_RS20215;Dbxref=GenBank:WP_000437375.1;Name=WP_000437375.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AD11_RS20215;product=RNA polymerase sigma factor RpoD;protein_id=WP_000437375.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 77326 77832 . - . ID=gene-AD11_RS20220;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AD11_RS20220;old_locus_tag=AD11_3441 NZ_JJLL01000149.1 Protein Homology CDS 77326 77832 . - 0 ID=cds-WP_000228937.1;Parent=gene-AD11_RS20220;Dbxref=GenBank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AD11_RS20220;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 77957 78032 . + . ID=gene-AD11_RS20225;Name=AD11_RS20225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS20225;old_locus_tag=AD11_3442 NZ_JJLL01000149.1 tRNAscan-SE tRNA 77957 78032 . + . ID=rna-AD11_RS20225;Parent=gene-AD11_RS20225;anticodon=(pos:77990..77992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS20225;product=tRNA-Ile NZ_JJLL01000149.1 tRNAscan-SE exon 77957 78032 . + . ID=exon-AD11_RS20225-1;Parent=rna-AD11_RS20225;anticodon=(pos:77990..77992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS20225;product=tRNA-Ile NZ_JJLL01000149.1 RefSeq gene 78086 78850 . - . ID=gene-AD11_RS20230;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AD11_RS20230;old_locus_tag=AD11_3443 NZ_JJLL01000149.1 Protein Homology CDS 78086 78850 . - 0 ID=cds-WP_001066494.1;Parent=gene-AD11_RS20230;Dbxref=GenBank:WP_001066494.1;Name=WP_001066494.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417541.1;locus_tag=AD11_RS20230;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_001066494.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 79138 79761 . + . ID=gene-AD11_RS20235;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AD11_RS20235;old_locus_tag=AD11_3444 NZ_JJLL01000149.1 Protein Homology CDS 79138 79761 . + 0 ID=cds-WP_000018003.1;Parent=gene-AD11_RS20235;Dbxref=GenBank:WP_000018003.1;Name=WP_000018003.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417542.1;locus_tag=AD11_RS20235;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018003.1;transl_table=11 NZ_JJLL01000149.1 RefSeq pseudogene 79915 81435 . - . ID=gene-AD11_RS20240;Name=aer;gbkey=Gene;gene=aer;gene_biotype=pseudogene;locus_tag=AD11_RS20240;old_locus_tag=AD11_3445;pseudo=true NZ_JJLL01000149.1 Protein Homology CDS 79915 81435 . - 0 ID=cds-AD11_RS20240;Parent=gene-AD11_RS20240;Note=internal stop;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417543.1;locus_tag=AD11_RS20240;product=aerotaxis sensor receptor Aer;pseudo=true;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 81853 83232 . + . ID=gene-AD11_RS20245;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AD11_RS20245;old_locus_tag=AD11_3447 NZ_JJLL01000149.1 Protein Homology CDS 81853 83232 . + 0 ID=cds-WP_001301395.1;Parent=gene-AD11_RS20245;Dbxref=GenBank:WP_001301395.1;Name=WP_001301395.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AD11_RS20245;product=putrescine aminotransferase;protein_id=WP_001301395.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 83274 83606 . - . ID=gene-AD11_RS20250;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AD11_RS20250;old_locus_tag=AD11_3448 NZ_JJLL01000149.1 Protein Homology CDS 83274 83606 . - 0 ID=cds-WP_000450594.1;Parent=gene-AD11_RS20250;Dbxref=GenBank:WP_000450594.1;Name=WP_000450594.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417545.1;locus_tag=AD11_RS20250;product=tRNA-binding protein;protein_id=WP_000450594.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 83825 84808 . + . ID=gene-AD11_RS20255;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AD11_RS20255;old_locus_tag=AD11_3449 NZ_JJLL01000149.1 Protein Homology CDS 83825 84808 . + 0 ID=cds-WP_000212475.1;Parent=gene-AD11_RS20255;Dbxref=GenBank:WP_000212475.1;Name=WP_000212475.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AD11_RS20255;product=transcriptional regulator EbgR;protein_id=WP_000212475.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 84992 88084 . + . ID=gene-AD11_RS20260;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AD11_RS20260;old_locus_tag=AD11_3450 NZ_JJLL01000149.1 Protein Homology CDS 84992 88084 . + 0 ID=cds-WP_001082859.1;Parent=gene-AD11_RS20260;Dbxref=GenBank:WP_001082859.1;Name=WP_001082859.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026199.1;locus_tag=AD11_RS20260;product=beta-galactosidase subunit alpha;protein_id=WP_001082859.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 88081 88530 . + . ID=gene-AD11_RS20265;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AD11_RS20265;old_locus_tag=AD11_3451 NZ_JJLL01000149.1 Protein Homology CDS 88081 88530 . + 0 ID=cds-WP_001219954.1;Parent=gene-AD11_RS20265;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AD11_RS20265;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 88593 90026 . + . ID=gene-AD11_RS20270;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=AD11_RS20270;old_locus_tag=AD11_3452 NZ_JJLL01000149.1 Protein Homology CDS 88593 90026 . + 0 ID=cds-WP_001285432.1;Parent=gene-AD11_RS20270;Dbxref=GenBank:WP_001285432.1;Name=WP_001285432.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026200.1;locus_tag=AD11_RS20270;product=amino acid permease;protein_id=WP_001285432.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 90160 91230 . + . ID=gene-AD11_RS20275;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AD11_RS20275;old_locus_tag=AD11_3453 NZ_JJLL01000149.1 Protein Homology CDS 90160 91230 . + 0 ID=cds-WP_000767652.1;Parent=gene-AD11_RS20275;Dbxref=GenBank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AD11_RS20275;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 91247 93598 . + . ID=gene-AD11_RS20280;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=AD11_RS20280;old_locus_tag=AD11_3454 NZ_JJLL01000149.1 Protein Homology CDS 91247 93598 . + 0 ID=cds-WP_000695489.1;Parent=gene-AD11_RS20280;Dbxref=GenBank:WP_000695489.1;Name=WP_000695489.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AD11_RS20280;product=alpha-glucosidase;protein_id=WP_000695489.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 94324 96342 . + . ID=gene-AD11_RS20285;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AD11_RS20285;old_locus_tag=AD11_3456 NZ_JJLL01000149.1 Protein Homology CDS 94324 96342 . + 0 ID=cds-WP_000121433.1;Parent=gene-AD11_RS20285;Dbxref=GenBank:WP_000121433.1;Name=WP_000121433.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417552.1;locus_tag=AD11_RS20285;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_000121433.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 96387 96803 . - . ID=gene-AD11_RS20290;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AD11_RS20290;old_locus_tag=AD11_3457 NZ_JJLL01000149.1 Protein Homology CDS 96387 96803 . - 0 ID=cds-WP_000560266.1;Parent=gene-AD11_RS20290;Dbxref=GenBank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AD11_RS20290;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 96800 97114 . - . ID=gene-AD11_RS20295;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AD11_RS20295;old_locus_tag=AD11_3458 NZ_JJLL01000149.1 Protein Homology CDS 96800 97114 . - 0 ID=cds-WP_000550189.1;Parent=gene-AD11_RS20295;Dbxref=GenBank:WP_000550189.1;Name=WP_000550189.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AD11_RS20295;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_000550189.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 97398 98534 . - . ID=gene-AD11_RS20305;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AD11_RS20305;old_locus_tag=AD11_3459 NZ_JJLL01000149.1 Protein Homology CDS 97398 98534 . - 0 ID=cds-WP_000018695.1;Parent=gene-AD11_RS20305;Dbxref=GenBank:WP_000018695.1;Name=WP_000018695.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AD11_RS20305;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018695.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 98619 99122 . + . ID=gene-AD11_RS20310;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AD11_RS20310;old_locus_tag=AD11_3460 NZ_JJLL01000149.1 Protein Homology CDS 98619 99122 . + 0 ID=cds-WP_001300832.1;Parent=gene-AD11_RS20310;Dbxref=GenBank:WP_001300832.1;Name=WP_001300832.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417556.2;locus_tag=AD11_RS20310;product=M48 metallopeptidase family protein;protein_id=WP_001300832.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 99199 99891 . + . ID=gene-AD11_RS20315;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AD11_RS20315;old_locus_tag=AD11_3461 NZ_JJLL01000149.1 Protein Homology CDS 99199 99891 . + 0 ID=cds-WP_000942548.1;Parent=gene-AD11_RS20315;Dbxref=GenBank:WP_000942548.1;Name=WP_000942548.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417557.1;locus_tag=AD11_RS20315;product=SanA/YdcF family protein;protein_id=WP_000942548.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 99970 100956 . + . ID=gene-AD11_RS20320;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=AD11_RS20320;old_locus_tag=AD11_3462 NZ_JJLL01000149.1 Protein Homology CDS 99970 100956 . + 0 ID=cds-WP_000617698.1;Parent=gene-AD11_RS20320;Dbxref=GenBank:WP_000617698.1;Name=WP_000617698.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AD11_RS20320;product=Gfo/Idh/MocA family protein;protein_id=WP_000617698.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 101239 102204 . + . ID=gene-AD11_RS20325;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AD11_RS20325;old_locus_tag=AD11_3463 NZ_JJLL01000149.1 Protein Homology CDS 101239 102204 . + 0 ID=cds-WP_001098805.1;Parent=gene-AD11_RS20325;Dbxref=GenBank:WP_001098805.1;Name=WP_001098805.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098790.1;locus_tag=AD11_RS20325;product=TerC family membrane protein Alx;protein_id=WP_001098805.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 102820 104064 . + . ID=gene-AD11_RS20330;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AD11_RS20330;old_locus_tag=AD11_3465 NZ_JJLL01000149.1 Protein Homology CDS 102820 104064 . + 0 ID=cds-WP_000211656.1;Parent=gene-AD11_RS20330;Dbxref=GenBank:WP_000211656.1;Name=WP_000211656.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AD11_RS20330;product=serine/threonine transporter SstT;protein_id=WP_000211656.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 104069 104620 . - . ID=gene-AD11_RS20335;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=AD11_RS20335;old_locus_tag=AD11_3466 NZ_JJLL01000149.1 Protein Homology CDS 104069 104620 . - 0 ID=cds-WP_001455347.1;Parent=gene-AD11_RS20335;Dbxref=GenBank:WP_001455347.1;Name=WP_001455347.1;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=AD11_RS20335;product=YgjV family protein;protein_id=WP_001455347.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 104703 106190 . - . ID=gene-AD11_RS20340;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AD11_RS20340;old_locus_tag=AD11_3467 NZ_JJLL01000149.1 Protein Homology CDS 104703 106190 . - 0 ID=cds-WP_001199352.1;Parent=gene-AD11_RS20340;Dbxref=GenBank:WP_001199352.1;Name=WP_001199352.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AD11_RS20340;product=altronate dehydratase;protein_id=WP_001199352.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 106205 107617 . - . ID=gene-AD11_RS20345;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AD11_RS20345;old_locus_tag=AD11_3468 NZ_JJLL01000149.1 Protein Homology CDS 106205 107617 . - 0 ID=cds-WP_000187442.1;Parent=gene-AD11_RS20345;Dbxref=GenBank:WP_000187442.1;Name=WP_000187442.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AD11_RS20345;product=glucuronate isomerase;protein_id=WP_000187442.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 108099 109397 . + . ID=gene-AD11_RS20350;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AD11_RS20350;old_locus_tag=AD11_3469 NZ_JJLL01000149.1 Protein Homology CDS 108099 109397 . + 0 ID=cds-WP_001226465.1;Parent=gene-AD11_RS20350;Dbxref=GenBank:WP_001226465.1;Name=WP_001226465.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AD11_RS20350;product=hexuronate transporter ExuT;protein_id=WP_001226465.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 109527 110303 . + . ID=gene-AD11_RS20355;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AD11_RS20355;old_locus_tag=AD11_3470 NZ_JJLL01000149.1 Protein Homology CDS 109527 110303 . + 0 ID=cds-WP_000406493.1;Parent=gene-AD11_RS20355;Dbxref=GenBank:WP_000406493.1;Name=WP_000406493.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AD11_RS20355;product=transcriptional regulator ExuR;protein_id=WP_000406493.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 110543 110626 . + . ID=gene-AD11_RS32715;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AD11_RS32715 NZ_JJLL01000149.1 Protein Homology CDS 110543 110626 . + 0 ID=cds-WP_211180508.1;Parent=gene-AD11_RS32715;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AD11_RS32715;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 110648 111310 . + . ID=gene-AD11_RS20360;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AD11_RS20360;old_locus_tag=AD11_3473 NZ_JJLL01000149.1 Protein Homology CDS 110648 111310 . + 0 ID=cds-WP_000422149.1;Parent=gene-AD11_RS20360;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AD11_RS20360;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 111314 111697 . + . ID=gene-AD11_RS20365;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AD11_RS20365;old_locus_tag=AD11_3474 NZ_JJLL01000149.1 Protein Homology CDS 111314 111697 . + 0 ID=cds-WP_001166761.1;Parent=gene-AD11_RS20365;Dbxref=GenBank:WP_001166761.1;Name=WP_001166761.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312005.1;locus_tag=AD11_RS20365;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166761.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 111844 112212 . + . ID=gene-AD11_RS20370;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AD11_RS20370;old_locus_tag=AD11_3475 NZ_JJLL01000149.1 Protein Homology CDS 111844 112212 . + 0 ID=cds-WP_001295543.1;Parent=gene-AD11_RS20370;Dbxref=GenBank:WP_001295543.1;Name=WP_001295543.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AD11_RS20370;product=DUF1090 family protein YqjC;protein_id=WP_001295543.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 112250 112555 . + . ID=gene-AD11_RS20375;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AD11_RS20375;old_locus_tag=AD11_3476 NZ_JJLL01000149.1 Protein Homology CDS 112250 112555 . + 0 ID=cds-WP_000031415.1;Parent=gene-AD11_RS20375;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AD11_RS20375;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 112558 112962 . + . ID=gene-AD11_RS20380;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AD11_RS20380;old_locus_tag=AD11_3477 NZ_JJLL01000149.1 Protein Homology CDS 112558 112962 . + 0 ID=cds-WP_000785722.1;Parent=gene-AD11_RS20380;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AD11_RS20380;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 112952 113251 . + . ID=gene-AD11_RS20385;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AD11_RS20385;old_locus_tag=AD11_3478 NZ_JJLL01000149.1 Protein Homology CDS 112952 113251 . + 0 ID=cds-WP_000096086.1;Parent=gene-AD11_RS20385;Dbxref=GenBank:WP_000096086.1;Name=WP_000096086.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312009.1;locus_tag=AD11_RS20385;product=YqjK-like family protein;protein_id=WP_000096086.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 113437 113829 . + . ID=gene-AD11_RS20390;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AD11_RS20390;old_locus_tag=AD11_3479 NZ_JJLL01000149.1 Protein Homology CDS 113437 113829 . + 0 ID=cds-WP_000732240.1;Parent=gene-AD11_RS20390;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AD11_RS20390;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 113899 114885 . + . ID=gene-AD11_RS20395;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AD11_RS20395;old_locus_tag=AD11_3480 NZ_JJLL01000149.1 Protein Homology CDS 113899 114885 . + 0 ID=cds-WP_000531205.1;Parent=gene-AD11_RS20395;Dbxref=GenBank:WP_000531205.1;Name=WP_000531205.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708909.2;locus_tag=AD11_RS20395;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531205.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 115178 115543 . + . ID=gene-AD11_RS20400;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AD11_RS20400;old_locus_tag=AD11_3481 NZ_JJLL01000149.1 Protein Homology CDS 115178 115543 . + 0 ID=cds-WP_000384145.1;Parent=gene-AD11_RS20400;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AD11_RS20400;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 115785 116141 . + . ID=gene-AD11_RS20405;Name=yhaI;gbkey=Gene;gene=yhaI;gene_biotype=protein_coding;locus_tag=AD11_RS20405;old_locus_tag=AD11_3482 NZ_JJLL01000149.1 Protein Homology CDS 115785 116141 . + 0 ID=cds-WP_033865753.1;Parent=gene-AD11_RS20405;Dbxref=GenBank:WP_033865753.1;Name=WP_033865753.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AD11_RS20405;product=DUF805 domain-containing protein;protein_id=WP_033865753.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 116192 117088 . - . ID=gene-AD11_RS20410;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AD11_RS20410;old_locus_tag=AD11_3483 NZ_JJLL01000149.1 Protein Homology CDS 116192 117088 . - 0 ID=cds-WP_001041009.1;Parent=gene-AD11_RS20410;Dbxref=GenBank:WP_001041009.1;Name=WP_001041009.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AD11_RS20410;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041009.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 117193 117894 . + . ID=gene-AD11_RS20415;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AD11_RS20415;old_locus_tag=AD11_3484 NZ_JJLL01000149.1 Protein Homology CDS 117193 117894 . + 0 ID=cds-WP_033865756.1;Parent=gene-AD11_RS20415;Dbxref=GenBank:WP_033865756.1;Name=WP_033865756.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AD11_RS20415;product=pirin family protein;protein_id=WP_033865756.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 117917 118081 . + . ID=gene-AD11_RS20420;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AD11_RS20420;old_locus_tag=AD11_3485 NZ_JJLL01000149.1 Protein Homology CDS 117917 118081 . + 0 ID=cds-WP_001426206.1;Parent=gene-AD11_RS20420;Dbxref=GenBank:WP_001426206.1;Name=WP_001426206.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312016.2;locus_tag=AD11_RS20420;product=protein YhaL;protein_id=WP_001426206.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 118215 119525 . - . ID=gene-AD11_RS20425;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AD11_RS20425;old_locus_tag=AD11_3486 NZ_JJLL01000149.1 Protein Homology CDS 118215 119525 . - 0 ID=cds-WP_000460514.1;Parent=gene-AD11_RS20425;Dbxref=GenBank:WP_000460514.1;Name=WP_000460514.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312017.1;locus_tag=AD11_RS20425;product=cysteine desulfidase;protein_id=WP_000460514.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 119553 120884 . - . ID=gene-AD11_RS20430;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AD11_RS20430;old_locus_tag=AD11_3487 NZ_JJLL01000149.1 Protein Homology CDS 119553 120884 . - 0 ID=cds-WP_000401598.1;Parent=gene-AD11_RS20430;Dbxref=GenBank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AD11_RS20430;product=amino acid permease;protein_id=WP_000401598.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 121159 122523 . - . ID=gene-AD11_RS20435;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AD11_RS20435;old_locus_tag=AD11_3488 NZ_JJLL01000149.1 Protein Homology CDS 121159 122523 . - 0 ID=cds-WP_000622126.1;Parent=gene-AD11_RS20435;Dbxref=GenBank:WP_000622126.1;Name=WP_000622126.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AD11_RS20435;product=L-serine ammonia-lyase;protein_id=WP_000622126.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 122595 122984 . - . ID=gene-AD11_RS20440;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AD11_RS20440;old_locus_tag=AD11_3489 NZ_JJLL01000149.1 Protein Homology CDS 122595 122984 . - 0 ID=cds-WP_000719990.1;Parent=gene-AD11_RS20440;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AD11_RS20440;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 122998 125292 . - . ID=gene-AD11_RS20445;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AD11_RS20445;old_locus_tag=AD11_3490 NZ_JJLL01000149.1 Protein Homology CDS 122998 125292 . - 0 ID=cds-WP_001474655.1;Parent=gene-AD11_RS20445;Dbxref=GenBank:WP_001474655.1;Name=WP_001474655.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AD11_RS20445;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_001474655.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 125326 126534 . - . ID=gene-AD11_RS20450;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AD11_RS20450;old_locus_tag=AD11_3491 NZ_JJLL01000149.1 Protein Homology CDS 125326 126534 . - 0 ID=cds-WP_001295545.1;Parent=gene-AD11_RS20450;Dbxref=GenBank:WP_001295545.1;Name=WP_001295545.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=AD11_RS20450;product=propionate kinase;protein_id=WP_001295545.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 126560 127891 . - . ID=gene-AD11_RS20455;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AD11_RS20455;old_locus_tag=AD11_3492 NZ_JJLL01000149.1 Protein Homology CDS 126560 127891 . - 0 ID=cds-WP_000107723.1;Parent=gene-AD11_RS20455;Dbxref=GenBank:WP_000107723.1;Name=WP_000107723.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AD11_RS20455;product=threonine/serine transporter TdcC;protein_id=WP_000107723.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 127913 128902 . - . ID=gene-AD11_RS20460;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AD11_RS20460;old_locus_tag=AD11_3493 NZ_JJLL01000149.1 Protein Homology CDS 127913 128902 . - 0 ID=cds-WP_000548347.1;Parent=gene-AD11_RS20460;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AD11_RS20460;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 129001 129939 . - . ID=gene-AD11_RS20465;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AD11_RS20465;old_locus_tag=AD11_3494 NZ_JJLL01000149.1 Protein Homology CDS 129001 129939 . - 0 ID=cds-WP_000104211.1;Parent=gene-AD11_RS20465;Dbxref=GenBank:WP_000104211.1;Name=WP_000104211.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AD11_RS20465;product=transcriptional regulator TdcA;protein_id=WP_000104211.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 130254 130472 . + . ID=gene-AD11_RS32240;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AD11_RS32240 NZ_JJLL01000149.1 Protein Homology CDS 130254 130472 . + 0 ID=cds-WP_001301311.1;Parent=gene-AD11_RS32240;Dbxref=GenBank:WP_001301311.1;Name=WP_001301311.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AD11_RS32240;product=transcriptional activator TdcR;protein_id=WP_001301311.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 130728 131267 . + . ID=gene-AD11_RS20475;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AD11_RS20475;old_locus_tag=AD11_3496 NZ_JJLL01000149.1 Protein Homology CDS 130728 131267 . + 0 ID=cds-WP_000675733.1;Parent=gene-AD11_RS20475;Dbxref=GenBank:WP_000675733.1;Name=WP_000675733.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417590.2;locus_tag=AD11_RS20475;product=protein YhaB;protein_id=WP_000675733.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 131289 132476 . + . ID=gene-AD11_RS20480;Name=yhaC;gbkey=Gene;gene=yhaC;gene_biotype=protein_coding;locus_tag=AD11_RS20480;old_locus_tag=AD11_3497 NZ_JJLL01000149.1 Protein Homology CDS 131289 132476 . + 0 ID=cds-WP_000484598.1;Parent=gene-AD11_RS20480;Dbxref=GenBank:WP_000484598.1;Name=WP_000484598.1;gbkey=CDS;gene=yhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AD11_RS20480;product=YhaC family protein;protein_id=WP_000484598.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 133090 133466 . - . ID=gene-AD11_RS27495;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AD11_RS27495 NZ_JJLL01000149.1 cmsearch RNase_P_RNA 133090 133466 . - . ID=rna-AD11_RS27495;Parent=gene-AD11_RS27495;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27495;product=RNase P RNA component class A NZ_JJLL01000149.1 cmsearch exon 133090 133466 . - . ID=exon-AD11_RS27495-1;Parent=rna-AD11_RS27495;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27495;product=RNase P RNA component class A NZ_JJLL01000149.1 RefSeq gene 133499 134644 . - . ID=gene-AD11_RS20485;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AD11_RS20485;old_locus_tag=AD11_3500 NZ_JJLL01000149.1 Protein Homology CDS 133499 134644 . - 0 ID=cds-WP_001300387.1;Parent=gene-AD11_RS20485;Dbxref=GenBank:WP_001300387.1;Name=WP_001300387.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417593.4;locus_tag=AD11_RS20485;product=glycerate 2-kinase;protein_id=WP_001300387.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 134741 135631 . - . ID=gene-AD11_RS20490;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AD11_RS20490;old_locus_tag=AD11_3501 NZ_JJLL01000149.1 Protein Homology CDS 134741 135631 . - 0 ID=cds-WP_001303675.1;Parent=gene-AD11_RS20490;Dbxref=GenBank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AD11_RS20490;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 135661 136431 . - . ID=gene-AD11_RS20495;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AD11_RS20495;old_locus_tag=AD11_3502 NZ_JJLL01000149.1 Protein Homology CDS 135661 136431 . - 0 ID=cds-WP_001058209.1;Parent=gene-AD11_RS20495;Dbxref=GenBank:WP_001058209.1;Name=WP_001058209.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417595.1;locus_tag=AD11_RS20495;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001058209.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 136447 137781 . - . ID=gene-AD11_RS20500;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=AD11_RS20500;old_locus_tag=AD11_3503 NZ_JJLL01000149.1 Protein Homology CDS 136447 137781 . - 0 ID=cds-WP_000599636.1;Parent=gene-AD11_RS20500;Dbxref=GenBank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AD11_RS20500;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599636.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 138156 139727 . + . ID=gene-AD11_RS20505;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=AD11_RS20505;old_locus_tag=AD11_3506 NZ_JJLL01000149.1 Protein Homology CDS 138156 139727 . + 0 ID=cds-WP_001273753.1;Parent=gene-AD11_RS20505;Dbxref=GenBank:WP_001273753.1;Name=WP_001273753.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417597.1;locus_tag=AD11_RS20505;product=galactarate dehydratase;protein_id=WP_001273753.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 139876 140211 . + . ID=gene-AD11_RS20510;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=AD11_RS20510 NZ_JJLL01000149.1 Protein Homology CDS 139876 140211 . + 0 ID=cds-WP_001307405.1;Parent=gene-AD11_RS20510;Dbxref=GenBank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=AD11_RS20510;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 140211 140675 . + . ID=gene-AD11_RS20515;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;locus_tag=AD11_RS20515;old_locus_tag=AD11_3508 NZ_JJLL01000149.1 Protein Homology CDS 140211 140675 . + 0 ID=cds-WP_000347273.1;Parent=gene-AD11_RS20515;Dbxref=GenBank:WP_000347273.1;Name=WP_000347273.1;gbkey=CDS;gene=yhaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=AD11_RS20515;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347273.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 140730 141539 . - . ID=gene-AD11_RS20520;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AD11_RS20520;old_locus_tag=AD11_3509 NZ_JJLL01000149.1 Protein Homology CDS 140730 141539 . - 0 ID=cds-WP_000072187.1;Parent=gene-AD11_RS20520;Dbxref=GenBank:WP_000072187.1;Name=WP_000072187.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AD11_RS20520;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072187.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 141788 143068 . + . ID=gene-AD11_RS20525;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AD11_RS20525;old_locus_tag=AD11_3510 NZ_JJLL01000149.1 Protein Homology CDS 141788 143068 . + 0 ID=cds-WP_033865762.1;Parent=gene-AD11_RS20525;Dbxref=GenBank:WP_033865762.1;Name=WP_033865762.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=AD11_RS20525;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_033865762.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 143091 143564 . + . ID=gene-AD11_RS20530;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=AD11_RS20530;old_locus_tag=AD11_3511 NZ_JJLL01000149.1 Protein Homology CDS 143091 143564 . + 0 ID=cds-WP_001336162.1;Parent=gene-AD11_RS20530;Dbxref=GenBank:WP_001336162.1;Name=WP_001336162.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417602.4;locus_tag=AD11_RS20530;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_001336162.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 143575 144354 . + . ID=gene-AD11_RS20535;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=AD11_RS20535;old_locus_tag=AD11_3512 NZ_JJLL01000149.1 Protein Homology CDS 143575 144354 . + 0 ID=cds-WP_000406209.1;Parent=gene-AD11_RS20535;Dbxref=GenBank:WP_000406209.1;Name=WP_000406209.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=AD11_RS20535;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000406209.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 144344 145222 . + . ID=gene-AD11_RS20540;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=AD11_RS20540;old_locus_tag=AD11_3513 NZ_JJLL01000149.1 Protein Homology CDS 144344 145222 . + 0 ID=cds-WP_001295548.1;Parent=gene-AD11_RS20540;Dbxref=GenBank:WP_001295548.1;Name=WP_001295548.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=AD11_RS20540;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_001295548.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 145240 145674 . + . ID=gene-AD11_RS20545;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=AD11_RS20545;old_locus_tag=AD11_3514 NZ_JJLL01000149.1 Protein Homology CDS 145240 145674 . + 0 ID=cds-WP_000948824.1;Parent=gene-AD11_RS20545;Dbxref=GenBank:WP_000948824.1;Name=WP_000948824.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=AD11_RS20545;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_000948824.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 145671 146804 . + . ID=gene-AD11_RS20550;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AD11_RS20550;old_locus_tag=AD11_3515 NZ_JJLL01000149.1 Protein Homology CDS 145671 146804 . + 0 ID=cds-WP_001326623.1;Parent=gene-AD11_RS20550;Dbxref=GenBank:WP_001326623.1;Name=WP_001326623.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=AD11_RS20550;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001326623.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 147155 148309 . + . ID=gene-AD11_RS20555;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=AD11_RS20555;old_locus_tag=AD11_3517 NZ_JJLL01000149.1 Protein Homology CDS 147155 148309 . + 0 ID=cds-WP_001114869.1;Parent=gene-AD11_RS20555;Dbxref=GenBank:WP_001114869.1;Name=WP_001114869.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=AD11_RS20555;product=AgaS family sugar isomerase;protein_id=WP_001114869.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 148322 149182 . + . ID=gene-AD11_RS20560;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=AD11_RS20560;old_locus_tag=AD11_3518 NZ_JJLL01000149.1 Protein Homology CDS 148322 149182 . + 0 ID=cds-WP_000022766.1;Parent=gene-AD11_RS20560;Dbxref=GenBank:WP_000022766.1;Name=WP_000022766.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=AD11_RS20560;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_000022766.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 149349 149825 . + . ID=gene-AD11_RS20565;Name=agaB;gbkey=Gene;gene=agaB;gene_biotype=protein_coding;locus_tag=AD11_RS20565;old_locus_tag=AD11_3519 NZ_JJLL01000149.1 Protein Homology CDS 149349 149825 . + 0 ID=cds-WP_000203711.1;Parent=gene-AD11_RS20565;Dbxref=GenBank:WP_000203711.1;Name=WP_000203711.1;gbkey=CDS;gene=agaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417607.1;locus_tag=AD11_RS20565;product=PTS galactosamine transporter subunit IIB;protein_id=WP_000203711.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 149864 150667 . + . ID=gene-AD11_RS20570;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;locus_tag=AD11_RS20570;old_locus_tag=AD11_3520 NZ_JJLL01000149.1 Protein Homology CDS 149864 150667 . + 0 ID=cds-WP_000544489.1;Parent=gene-AD11_RS20570;Dbxref=GenBank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;gene=agaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=AD11_RS20570;product=PTS galactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 150657 151448 . + . ID=gene-AD11_RS20575;Name=agaD;gbkey=Gene;gene=agaD;gene_biotype=protein_coding;locus_tag=AD11_RS20575;old_locus_tag=AD11_3521 NZ_JJLL01000149.1 Protein Homology CDS 150657 151448 . + 0 ID=cds-WP_000534347.1;Parent=gene-AD11_RS20575;Dbxref=GenBank:WP_000534347.1;Name=WP_000534347.1;gbkey=CDS;gene=agaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417609.1;locus_tag=AD11_RS20575;product=PTS galactosamine transporter subunit IID;protein_id=WP_000534347.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 151449 152204 . + . ID=gene-AD11_RS20580;Name=agaI;gbkey=Gene;gene=agaI;gene_biotype=protein_coding;locus_tag=AD11_RS20580;old_locus_tag=AD11_3522 NZ_JJLL01000149.1 Protein Homology CDS 151449 152204 . + 0 ID=cds-WP_001311150.1;Parent=gene-AD11_RS20580;Dbxref=GenBank:WP_001311150.1;Name=WP_001311150.1;gbkey=CDS;gene=agaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417610.1;locus_tag=AD11_RS20580;product=galactosamine-6-phosphate isomerase;protein_id=WP_001311150.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 152605 153189 . + . ID=gene-AD11_RS20585;Name=yraH;gbkey=Gene;gene=yraH;gene_biotype=protein_coding;locus_tag=AD11_RS20585;old_locus_tag=AD11_3523 NZ_JJLL01000149.1 Protein Homology CDS 152605 153189 . + 0 ID=cds-WP_001045432.1;Parent=gene-AD11_RS20585;Dbxref=GenBank:WP_001045432.1;Name=WP_001045432.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yraH;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417611.1;locus_tag=AD11_RS20585;product=fimbrial protein;protein_id=WP_001045432.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 153269 153964 . + . ID=gene-AD11_RS20590;Name=yraI;gbkey=Gene;gene=yraI;gene_biotype=protein_coding;locus_tag=AD11_RS20590;old_locus_tag=AD11_3524 NZ_JJLL01000149.1 Protein Homology CDS 153269 153964 . + 0 ID=cds-WP_000044775.1;Parent=gene-AD11_RS20590;Dbxref=GenBank:WP_000044775.1;Name=WP_000044775.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yraI;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=AD11_RS20590;product=fimbrial biogenesis chaperone;protein_id=WP_000044775.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 153993 156509 . + . ID=gene-AD11_RS20595;Name=yraJ;gbkey=Gene;gene=yraJ;gene_biotype=protein_coding;locus_tag=AD11_RS20595;old_locus_tag=AD11_3525 NZ_JJLL01000149.1 Protein Homology CDS 153993 156509 . + 0 ID=cds-WP_001355538.1;Parent=gene-AD11_RS20595;Dbxref=GenBank:WP_001355538.1;Name=WP_001355538.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=yraJ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417613.1;locus_tag=AD11_RS20595;product=fimbria/pilus outer membrane usher protein;protein_id=WP_001355538.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 156520 157611 . + . ID=gene-AD11_RS20600;Name=yraK;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;locus_tag=AD11_RS20600;old_locus_tag=AD11_3526 NZ_JJLL01000149.1 Protein Homology CDS 156520 157611 . + 0 ID=cds-WP_000816992.1;Parent=gene-AD11_RS20600;Dbxref=GenBank:WP_000816992.1;Name=WP_000816992.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yraK;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AD11_RS20600;product=fimbrial protein;protein_id=WP_000816992.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 157654 158514 . - . ID=gene-AD11_RS20605;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AD11_RS20605;old_locus_tag=AD11_3527 NZ_JJLL01000149.1 Protein Homology CDS 157654 158514 . - 0 ID=cds-WP_000809262.1;Parent=gene-AD11_RS20605;Dbxref=GenBank:WP_000809262.1;Name=WP_000809262.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AD11_RS20605;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000809262.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 158579 160615 . + . ID=gene-AD11_RS20610;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AD11_RS20610;old_locus_tag=AD11_3528 NZ_JJLL01000149.1 Protein Homology CDS 158579 160615 . + 0 ID=cds-WP_000249104.1;Parent=gene-AD11_RS20610;Dbxref=GenBank:WP_000249104.1;Name=WP_000249104.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417616.1;locus_tag=AD11_RS20610;product=penicillin-binding protein activator LpoA;protein_id=WP_000249104.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 160573 160968 . + . ID=gene-AD11_RS20615;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AD11_RS20615;old_locus_tag=AD11_3529 NZ_JJLL01000149.1 Protein Homology CDS 160573 160968 . + 0 ID=cds-WP_032174821.1;Parent=gene-AD11_RS20615;Dbxref=GenBank:WP_032174821.1;Name=WP_032174821.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AD11_RS20615;product=YraN family protein;protein_id=WP_032174821.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 160988 161578 . + . ID=gene-AD11_RS20620;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AD11_RS20620;old_locus_tag=AD11_3530 NZ_JJLL01000149.1 Protein Homology CDS 160988 161578 . + 0 ID=cds-WP_001158034.1;Parent=gene-AD11_RS20620;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AD11_RS20620;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 161588 162163 . + . ID=gene-AD11_RS20625;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AD11_RS20625;old_locus_tag=AD11_3531 NZ_JJLL01000149.1 Protein Homology CDS 161588 162163 . + 0 ID=cds-WP_000646033.1;Parent=gene-AD11_RS20625;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AD11_RS20625;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 162277 163317 . - . ID=gene-AD11_RS20630;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AD11_RS20630;old_locus_tag=AD11_3532 NZ_JJLL01000149.1 Protein Homology CDS 162277 163317 . - 0 ID=cds-WP_000147574.1;Parent=gene-AD11_RS20630;Dbxref=GenBank:WP_000147574.1;Name=WP_000147574.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417620.1;locus_tag=AD11_RS20630;product=permease;protein_id=WP_000147574.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 163390 164025 . - . ID=gene-AD11_RS20635;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AD11_RS20635;old_locus_tag=AD11_3533 NZ_JJLL01000149.1 Protein Homology CDS 163390 164025 . - 0 ID=cds-WP_001300423.1;Parent=gene-AD11_RS20635;Dbxref=GenBank:WP_001300423.1;Name=WP_001300423.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417621.2;locus_tag=AD11_RS20635;product=NAD(P)H-binding protein;protein_id=WP_001300423.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 164153 164671 . + . ID=gene-AD11_RS20640;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AD11_RS20640;old_locus_tag=AD11_3534 NZ_JJLL01000149.1 Protein Homology CDS 164153 164671 . + 0 ID=cds-WP_000037608.1;Parent=gene-AD11_RS20640;Dbxref=GenBank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AD11_RS20640;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 164651 165094 . - . ID=gene-AD11_RS20645;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AD11_RS20645;old_locus_tag=AD11_3535 NZ_JJLL01000149.1 Protein Homology CDS 164651 165094 . - 0 ID=cds-WP_000449030.1;Parent=gene-AD11_RS20645;Dbxref=GenBank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AD11_RS20645;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 165145 165447 . + . ID=gene-AD11_RS20650;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AD11_RS20650;old_locus_tag=AD11_3536 NZ_JJLL01000149.1 Protein Homology CDS 165145 165447 . + 0 ID=cds-WP_000189333.1;Parent=gene-AD11_RS20650;Dbxref=GenBank:WP_000189333.1;Name=WP_000189333.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417624.1;locus_tag=AD11_RS20650;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189333.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 165434 165937 . - . ID=gene-AD11_RS20655;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AD11_RS20655;old_locus_tag=AD11_3537 NZ_JJLL01000149.1 Protein Homology CDS 165434 165937 . - 0 ID=cds-WP_000908554.1;Parent=gene-AD11_RS20655;Dbxref=GenBank:WP_000908554.1;Name=WP_000908554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AD11_RS20655;product=GNAT family N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 165931 166455 . - . ID=gene-AD11_RS20660;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AD11_RS20660;old_locus_tag=AD11_3538 NZ_JJLL01000149.1 Protein Homology CDS 165931 166455 . - 0 ID=cds-WP_001295552.1;Parent=gene-AD11_RS20660;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AD11_RS20660;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 166664 167659 . + . ID=gene-AD11_RS20665;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AD11_RS20665;old_locus_tag=AD11_3540 NZ_JJLL01000149.1 Protein Homology CDS 166664 167659 . + 0 ID=cds-WP_000421305.1;Parent=gene-AD11_RS20665;Dbxref=GenBank:WP_000421305.1;Name=WP_000421305.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AD11_RS20665;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421305.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 167668 168546 . + . ID=gene-AD11_RS20670;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AD11_RS20670;old_locus_tag=AD11_3541 NZ_JJLL01000149.1 Protein Homology CDS 167668 168546 . + 0 ID=cds-WP_001301318.1;Parent=gene-AD11_RS20670;Dbxref=GenBank:WP_001301318.1;Name=WP_001301318.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AD11_RS20670;product=U32 family peptidase;protein_id=WP_001301318.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 168627 169634 . + . ID=gene-AD11_RS20675;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AD11_RS20675;old_locus_tag=AD11_3542 NZ_JJLL01000149.1 Protein Homology CDS 168627 169634 . + 0 ID=cds-WP_000130380.1;Parent=gene-AD11_RS20675;Dbxref=GenBank:WP_000130380.1;Name=WP_000130380.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AD11_RS20675;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 169752 170996 . - . ID=gene-AD11_RS20680;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AD11_RS20680;old_locus_tag=AD11_3543 NZ_JJLL01000149.1 Protein Homology CDS 169752 170996 . - 0 ID=cds-WP_000224351.1;Parent=gene-AD11_RS20680;Dbxref=GenBank:WP_000224351.1;Name=WP_000224351.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417630.1;locus_tag=AD11_RS20680;product=tryptophan permease;protein_id=WP_000224351.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 171150 173039 . - . ID=gene-AD11_RS20690;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AD11_RS20690;old_locus_tag=AD11_3544 NZ_JJLL01000149.1 Protein Homology CDS 171150 173039 . - 0 ID=cds-WP_001295553.1;Parent=gene-AD11_RS20690;Dbxref=GenBank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AD11_RS20690;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 173032 173112 . - . ID=gene-AD11_RS30985;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AD11_RS30985 NZ_JJLL01000149.1 Protein Homology CDS 173032 173112 . - 0 ID=cds-WP_010723222.1;Parent=gene-AD11_RS30985;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AD11_RS30985;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 173219 174103 . - . ID=gene-AD11_RS20695;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AD11_RS20695;old_locus_tag=AD11_3545 NZ_JJLL01000149.1 Protein Homology CDS 173219 174103 . - 0 ID=cds-WP_000802080.1;Parent=gene-AD11_RS20695;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AD11_RS20695;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 174212 176347 . - . ID=gene-AD11_RS20700;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AD11_RS20700;old_locus_tag=AD11_3546 NZ_JJLL01000149.1 Protein Homology CDS 174212 176347 . - 0 ID=cds-WP_001295554.1;Parent=gene-AD11_RS20700;Dbxref=GenBank:WP_001295554.1;Name=WP_001295554.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417633.4;locus_tag=AD11_RS20700;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001295554.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 176594 176863 . - . ID=gene-AD11_RS20705;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AD11_RS20705;old_locus_tag=AD11_3547 NZ_JJLL01000149.1 Protein Homology CDS 176594 176863 . - 0 ID=cds-WP_000059466.1;Parent=gene-AD11_RS20705;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AD11_RS20705;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 177012 177956 . - . ID=gene-AD11_RS20710;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AD11_RS20710;old_locus_tag=AD11_3548 NZ_JJLL01000149.1 Protein Homology CDS 177012 177956 . - 0 ID=cds-WP_000089698.1;Parent=gene-AD11_RS20710;Dbxref=GenBank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AD11_RS20710;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 177956 178357 . - . ID=gene-AD11_RS20715;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AD11_RS20715;old_locus_tag=AD11_3549 NZ_JJLL01000149.1 Protein Homology CDS 177956 178357 . - 0 ID=cds-WP_001040205.1;Parent=gene-AD11_RS20715;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AD11_RS20715;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 178521 181193 . - . ID=gene-AD11_RS20720;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AD11_RS20720;old_locus_tag=AD11_3550 NZ_JJLL01000149.1 Protein Homology CDS 178521 181193 . - 0 ID=cds-WP_033865763.1;Parent=gene-AD11_RS20720;Dbxref=GenBank:WP_033865763.1;Name=WP_033865763.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AD11_RS20720;product=translation initiation factor IF-2;protein_id=WP_033865763.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 181218 182705 . - . ID=gene-AD11_RS20725;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AD11_RS20725;old_locus_tag=AD11_3551 NZ_JJLL01000149.1 Protein Homology CDS 181218 182705 . - 0 ID=cds-WP_001031057.1;Parent=gene-AD11_RS20725;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AD11_RS20725;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 182733 183185 . - . ID=gene-AD11_RS20730;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AD11_RS20730;old_locus_tag=AD11_3552 NZ_JJLL01000149.1 Protein Homology CDS 182733 183185 . - 0 ID=cds-WP_001300397.1;Parent=gene-AD11_RS20730;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AD11_RS20730;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 183392 183468 . - . ID=gene-AD11_RS20735;Name=AD11_RS20735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS20735;old_locus_tag=AD11_3553 NZ_JJLL01000149.1 tRNAscan-SE tRNA 183392 183468 . - . ID=rna-AD11_RS20735;Parent=gene-AD11_RS20735;anticodon=(pos:complement(183432..183434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS20735;product=tRNA-Met NZ_JJLL01000149.1 tRNAscan-SE exon 183392 183468 . - . ID=exon-AD11_RS20735-1;Parent=rna-AD11_RS20735;anticodon=(pos:complement(183432..183434));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS20735;product=tRNA-Met NZ_JJLL01000149.1 RefSeq gene 183816 185159 . + . ID=gene-AD11_RS20740;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AD11_RS20740;old_locus_tag=AD11_3555 NZ_JJLL01000149.1 Protein Homology CDS 183816 185159 . + 0 ID=cds-WP_000207680.1;Parent=gene-AD11_RS20740;Dbxref=GenBank:WP_000207680.1;Name=WP_000207680.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AD11_RS20740;product=argininosuccinate synthase;protein_id=WP_000207680.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 185167 186792 . - . ID=gene-AD11_RS20745;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AD11_RS20745;old_locus_tag=AD11_3556 NZ_JJLL01000149.1 Protein Homology CDS 185167 186792 . - 0 ID=cds-WP_001300540.1;Parent=gene-AD11_RS20745;Dbxref=GenBank:WP_001300540.1;Name=WP_001300540.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AD11_RS20745;product=phosphoethanolamine transferase;protein_id=WP_001300540.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 187251 187337 . - . ID=gene-AD11_RS20750;Name=AD11_RS20750;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS20750;old_locus_tag=AD11_3557 NZ_JJLL01000149.1 tRNAscan-SE tRNA 187251 187337 . - . ID=rna-AD11_RS20750;Parent=gene-AD11_RS20750;anticodon=(pos:complement(187301..187303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS20750;product=tRNA-Leu NZ_JJLL01000149.1 tRNAscan-SE exon 187251 187337 . - . ID=exon-AD11_RS20750-1;Parent=rna-AD11_RS20750;anticodon=(pos:complement(187301..187303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS20750;product=tRNA-Leu NZ_JJLL01000149.1 RefSeq gene 187352 187684 . - . ID=gene-AD11_RS20755;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AD11_RS20755;old_locus_tag=AD11_3558 NZ_JJLL01000149.1 Protein Homology CDS 187352 187684 . - 0 ID=cds-WP_001295556.1;Parent=gene-AD11_RS20755;Dbxref=GenBank:WP_001295556.1;Name=WP_001295556.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AD11_RS20755;product=preprotein translocase subunit SecG;protein_id=WP_001295556.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 187912 189249 . - . ID=gene-AD11_RS20760;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AD11_RS20760;old_locus_tag=AD11_3559 NZ_JJLL01000149.1 Protein Homology CDS 187912 189249 . - 0 ID=cds-WP_000071134.1;Parent=gene-AD11_RS20760;Dbxref=GenBank:WP_000071134.1;Name=WP_000071134.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=AD11_RS20760;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 189242 190090 . - . ID=gene-AD11_RS20765;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AD11_RS20765;old_locus_tag=AD11_3560 NZ_JJLL01000149.1 Protein Homology CDS 189242 190090 . - 0 ID=cds-WP_033866514.1;Parent=gene-AD11_RS20765;Dbxref=GenBank:WP_033866514.1;Name=WP_033866514.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AD11_RS20765;product=dihydropteroate synthase;protein_id=WP_033866514.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 190179 192113 . - . ID=gene-AD11_RS20770;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AD11_RS20770;old_locus_tag=AD11_3561 NZ_JJLL01000149.1 Protein Homology CDS 190179 192113 . - 0 ID=cds-WP_001107467.1;Parent=gene-AD11_RS20770;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AD11_RS20770;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 192213 192842 . - . ID=gene-AD11_RS20775;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AD11_RS20775;old_locus_tag=AD11_3562 NZ_JJLL01000149.1 Protein Homology CDS 192213 192842 . - 0 ID=cds-WP_000145975.1;Parent=gene-AD11_RS20775;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AD11_RS20775;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 192968 193261 . + . ID=gene-AD11_RS20780;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AD11_RS20780;old_locus_tag=AD11_3563 NZ_JJLL01000149.1 Protein Homology CDS 192968 193261 . + 0 ID=cds-WP_001054420.1;Parent=gene-AD11_RS20780;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AD11_RS20780;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 193417 193893 . - . ID=gene-AD11_RS20785;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AD11_RS20785;old_locus_tag=AD11_3564 NZ_JJLL01000149.1 Protein Homology CDS 193417 193893 . - 0 ID=cds-WP_001148001.1;Parent=gene-AD11_RS20785;Dbxref=GenBank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AD11_RS20785;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 194141 195574 . + . ID=gene-AD11_RS20790;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AD11_RS20790;old_locus_tag=AD11_3565 NZ_JJLL01000149.1 Protein Homology CDS 194141 195574 . + 0 ID=cds-WP_001212619.1;Parent=gene-AD11_RS20790;Dbxref=GenBank:WP_001212619.1;Name=WP_001212619.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AD11_RS20790;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212619.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 195760 196932 . - . ID=gene-AD11_RS20795;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AD11_RS20795;old_locus_tag=AD11_3566 NZ_JJLL01000149.1 Protein Homology CDS 195760 196932 . - 0 ID=cds-WP_000673572.1;Parent=gene-AD11_RS20795;Dbxref=GenBank:WP_000673572.1;Name=WP_000673572.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312089.1;locus_tag=AD11_RS20795;product=Obg family GTPase CgtA;protein_id=WP_000673572.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 196948 197913 . - . ID=gene-AD11_RS20800;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AD11_RS20800;old_locus_tag=AD11_3567 NZ_JJLL01000149.1 Protein Homology CDS 196948 197913 . - 0 ID=cds-WP_000813037.1;Parent=gene-AD11_RS20800;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AD11_RS20800;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 198040 198297 . - . ID=gene-AD11_RS20805;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AD11_RS20805;old_locus_tag=AD11_3568 NZ_JJLL01000149.1 Protein Homology CDS 198040 198297 . - 0 ID=cds-WP_000940595.1;Parent=gene-AD11_RS20805;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AD11_RS20805;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 198318 198629 . - . ID=gene-AD11_RS20810;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AD11_RS20810;old_locus_tag=AD11_3569 NZ_JJLL01000149.1 Protein Homology CDS 198318 198629 . - 0 ID=cds-WP_000271401.1;Parent=gene-AD11_RS20810;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AD11_RS20810;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 198888 199859 . + . ID=gene-AD11_RS20815;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AD11_RS20815;old_locus_tag=AD11_3570 NZ_JJLL01000149.1 Protein Homology CDS 198888 199859 . + 0 ID=cds-WP_001047336.1;Parent=gene-AD11_RS20815;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AD11_RS20815;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 200088 200366 . + . ID=gene-AD11_RS20820;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AD11_RS20820;old_locus_tag=AD11_3571 NZ_JJLL01000149.1 Protein Homology CDS 200088 200366 . + 0 ID=cds-WP_000445413.1;Parent=gene-AD11_RS20820;Dbxref=GenBank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AD11_RS20820;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 200414 201673 . - . ID=gene-AD11_RS20825;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AD11_RS20825;old_locus_tag=AD11_3572 NZ_JJLL01000149.1 Protein Homology CDS 200414 201673 . - 0 ID=cds-WP_000357259.1;Parent=gene-AD11_RS20825;Dbxref=GenBank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AD11_RS20825;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 201728 201982 . - . ID=gene-AD11_RS20830;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AD11_RS20830;old_locus_tag=AD11_3573 NZ_JJLL01000149.1 Protein Homology CDS 201728 201982 . - 0 ID=cds-WP_000429656.1;Parent=gene-AD11_RS20830;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AD11_RS20830;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 202142 202435 . - . ID=gene-AD11_RS20835;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AD11_RS20835;old_locus_tag=AD11_3574 NZ_JJLL01000149.1 Protein Homology CDS 202142 202435 . - 0 ID=cds-WP_000004488.1;Parent=gene-AD11_RS20835;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AD11_RS20835;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 202435 203070 . - . ID=gene-AD11_RS20840;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AD11_RS20840;old_locus_tag=AD11_3575 NZ_JJLL01000149.1 Protein Homology CDS 202435 203070 . - 0 ID=cds-WP_000476487.1;Parent=gene-AD11_RS20840;Dbxref=GenBank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AD11_RS20840;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 203089 203640 . - . ID=gene-AD11_RS20845;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AD11_RS20845;old_locus_tag=AD11_3576 NZ_JJLL01000149.1 Protein Homology CDS 203089 203640 . - 0 ID=cds-WP_001296448.1;Parent=gene-AD11_RS20845;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AD11_RS20845;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 203645 204427 . - . ID=gene-AD11_RS20850;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AD11_RS20850;old_locus_tag=AD11_3577 NZ_JJLL01000149.1 Protein Homology CDS 203645 204427 . - 0 ID=cds-WP_000925795.1;Parent=gene-AD11_RS20850;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AD11_RS20850;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 204435 205244 . - . ID=gene-AD11_RS20855;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AD11_RS20855;old_locus_tag=AD11_3578 NZ_JJLL01000149.1 Protein Homology CDS 204435 205244 . - 0 ID=cds-WP_000438245.1;Parent=gene-AD11_RS20855;Dbxref=GenBank:WP_000438245.1;Name=WP_000438245.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AD11_RS20855;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 205454 206431 . + . ID=gene-AD11_RS20860;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AD11_RS20860;old_locus_tag=AD11_3579 NZ_JJLL01000149.1 Protein Homology CDS 205454 206431 . + 0 ID=cds-WP_000922901.1;Parent=gene-AD11_RS20860;Dbxref=GenBank:WP_000922901.1;Name=WP_000922901.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417663.1;locus_tag=AD11_RS20860;product=calcium/sodium antiporter;protein_id=WP_000922901.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 206445 207431 . + . ID=gene-AD11_RS20865;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AD11_RS20865;old_locus_tag=AD11_3580 NZ_JJLL01000149.1 Protein Homology CDS 206445 207431 . + 0 ID=cds-WP_001295557.1;Parent=gene-AD11_RS20865;Dbxref=GenBank:WP_001295557.1;Name=WP_001295557.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AD11_RS20865;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_001295557.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 207452 208018 . + . ID=gene-AD11_RS20870;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AD11_RS20870;old_locus_tag=AD11_3581 NZ_JJLL01000149.1 Protein Homology CDS 207452 208018 . + 0 ID=cds-WP_000030005.1;Parent=gene-AD11_RS20870;Dbxref=GenBank:WP_000030005.1;Name=WP_000030005.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312104.1;locus_tag=AD11_RS20870;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030005.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 208015 208590 . + . ID=gene-AD11_RS20875;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AD11_RS20875;old_locus_tag=AD11_3582 NZ_JJLL01000149.1 Protein Homology CDS 208015 208590 . + 0 ID=cds-WP_000030537.1;Parent=gene-AD11_RS20875;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AD11_RS20875;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 208559 209116 . + . ID=gene-AD11_RS20880;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AD11_RS20880;old_locus_tag=AD11_3583 NZ_JJLL01000149.1 Protein Homology CDS 208559 209116 . + 0 ID=cds-WP_000669785.1;Parent=gene-AD11_RS20880;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AD11_RS20880;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 209123 209848 . + . ID=gene-AD11_RS20885;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AD11_RS20885;old_locus_tag=AD11_3584 NZ_JJLL01000149.1 Protein Homology CDS 209123 209848 . + 0 ID=cds-WP_000224099.1;Parent=gene-AD11_RS20885;Dbxref=GenBank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AD11_RS20885;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 209896 211329 . + . ID=gene-AD11_RS20890;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AD11_RS20890;old_locus_tag=AD11_3585 NZ_JJLL01000149.1 Protein Homology CDS 209896 211329 . + 0 ID=cds-WP_000809057.1;Parent=gene-AD11_RS20890;Dbxref=GenBank:WP_000809057.1;Name=WP_000809057.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417669.1;locus_tag=AD11_RS20890;product=RNA polymerase factor sigma-54;protein_id=WP_000809057.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 211352 211639 . + . ID=gene-AD11_RS20895;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AD11_RS20895;old_locus_tag=AD11_3586 NZ_JJLL01000149.1 Protein Homology CDS 211352 211639 . + 0 ID=cds-WP_001176599.1;Parent=gene-AD11_RS20895;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AD11_RS20895;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 211757 212248 . + . ID=gene-AD11_RS20900;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AD11_RS20900;old_locus_tag=AD11_3587 NZ_JJLL01000149.1 Protein Homology CDS 211757 212248 . + 0 ID=cds-WP_000183676.1;Parent=gene-AD11_RS20900;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AD11_RS20900;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 212294 213148 . + . ID=gene-AD11_RS20905;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AD11_RS20905;old_locus_tag=AD11_3588 NZ_JJLL01000149.1 Protein Homology CDS 212294 213148 . + 0 ID=cds-WP_000243741.1;Parent=gene-AD11_RS20905;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AD11_RS20905;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 213145 213417 . + . ID=gene-AD11_RS20910;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AD11_RS20910;old_locus_tag=AD11_3589 NZ_JJLL01000149.1 Protein Homology CDS 213145 213417 . + 0 ID=cds-WP_000216791.1;Parent=gene-AD11_RS20910;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AD11_RS20910;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 213631 214263 . + . ID=gene-AD11_RS20915;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AD11_RS20915;old_locus_tag=AD11_3590 NZ_JJLL01000149.1 Protein Homology CDS 213631 214263 . + 0 ID=cds-WP_000620405.1;Parent=gene-AD11_RS20915;Dbxref=GenBank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AD11_RS20915;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 214260 214988 . - . ID=gene-AD11_RS20920;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AD11_RS20920;old_locus_tag=AD11_3591 NZ_JJLL01000149.1 Protein Homology CDS 214260 214988 . - 0 ID=cds-WP_033865764.1;Parent=gene-AD11_RS20920;Dbxref=GenBank:WP_033865764.1;Name=WP_033865764.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AD11_RS20920;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_033865764.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 214985 215638 . - . ID=gene-AD11_RS20925;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AD11_RS20925;old_locus_tag=AD11_3592 NZ_JJLL01000149.1 Protein Homology CDS 214985 215638 . - 0 ID=cds-WP_001300411.1;Parent=gene-AD11_RS20925;Dbxref=GenBank:WP_001300411.1;Name=WP_001300411.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AD11_RS20925;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001300411.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 215868 218204 . - . ID=gene-AD11_RS20930;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AD11_RS20930;old_locus_tag=AD11_3593 NZ_JJLL01000149.1 Protein Homology CDS 215868 218204 . - 0 ID=cds-WP_000809774.1;Parent=gene-AD11_RS20930;Dbxref=GenBank:WP_000809774.1;Name=WP_000809774.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AD11_RS20930;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809774.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 218300 219229 . - . ID=gene-AD11_RS20935;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AD11_RS20935;old_locus_tag=AD11_3594 NZ_JJLL01000149.1 Protein Homology CDS 218300 219229 . - 0 ID=cds-WP_033865769.1;Parent=gene-AD11_RS20935;Dbxref=GenBank:WP_033865769.1;Name=WP_033865769.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AD11_RS20935;product=TIGR01212 family radical SAM protein;protein_id=WP_033865769.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 219904 224364 . + . ID=gene-AD11_RS20940;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AD11_RS20940;old_locus_tag=AD11_3595 NZ_JJLL01000149.1 Protein Homology CDS 219904 224364 . + 0 ID=cds-WP_001406033.1;Parent=gene-AD11_RS20940;Dbxref=GenBank:WP_001406033.1;Name=WP_001406033.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AD11_RS20940;product=glutamate synthase large subunit;protein_id=WP_001406033.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 224377 225795 . + . ID=gene-AD11_RS20945;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AD11_RS20945;old_locus_tag=AD11_3596 NZ_JJLL01000149.1 Protein Homology CDS 224377 225795 . + 0 ID=cds-WP_000081664.1;Parent=gene-AD11_RS20945;Dbxref=GenBank:WP_000081664.1;Name=WP_000081664.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AD11_RS20945;product=glutamate synthase subunit GltD;protein_id=WP_000081664.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 226355 227119 . + . ID=gene-AD11_RS20950;Name=gltF;gbkey=Gene;gene=gltF;gene_biotype=protein_coding;locus_tag=AD11_RS20950;old_locus_tag=AD11_3597 NZ_JJLL01000149.1 Protein Homology CDS 226355 227119 . + 0 ID=cds-WP_032083539.1;Parent=gene-AD11_RS20950;Dbxref=GenBank:WP_032083539.1;Name=WP_032083539.1;gbkey=CDS;gene=gltF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417681.1;locus_tag=AD11_RS20950;product=DUF1120 domain-containing protein;protein_id=WP_032083539.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 227291 227965 . + . ID=gene-AD11_RS20955;Name=yhcA;gbkey=Gene;gene=yhcA;gene_biotype=protein_coding;locus_tag=AD11_RS20955;old_locus_tag=AD11_3598 NZ_JJLL01000149.1 Protein Homology CDS 227291 227965 . + 0 ID=cds-WP_032083538.1;Parent=gene-AD11_RS20955;Dbxref=GenBank:WP_032083538.1;Name=WP_032083538.1;Ontology_term=GO:0061077;gbkey=CDS;gene=yhcA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417682.1;locus_tag=AD11_RS20955;product=fimbria/pilus chaperone family protein;protein_id=WP_032083538.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 227986 230367 . + . ID=gene-AD11_RS20960;Name=yhcD;gbkey=Gene;gene=yhcD;gene_biotype=protein_coding;locus_tag=AD11_RS20960;old_locus_tag=AD11_3599 NZ_JJLL01000149.1 Protein Homology CDS 227986 230367 . + 0 ID=cds-WP_033865765.1;Parent=gene-AD11_RS20960;Dbxref=GenBank:WP_033865765.1;Name=WP_033865765.1;gbkey=CDS;gene=yhcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417683.1;locus_tag=AD11_RS20960;product=fimbrial biogenesis usher protein;protein_id=WP_033865765.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 230364 230909 . + . ID=gene-AD11_RS20965;Name=AD11_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS20965;old_locus_tag=AD11_3600 NZ_JJLL01000149.1 Protein Homology CDS 230364 230909 . + 0 ID=cds-WP_032083536.1;Parent=gene-AD11_RS20965;Dbxref=GenBank:WP_032083536.1;Name=WP_032083536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000821351.1;locus_tag=AD11_RS20965;product=YhcE family protein;protein_id=WP_032083536.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 230906 231622 . + . ID=gene-AD11_RS20970;Name=yhcF;gbkey=Gene;gene=yhcF;gene_biotype=protein_coding;locus_tag=AD11_RS20970;old_locus_tag=AD11_3601 NZ_JJLL01000149.1 Protein Homology CDS 230906 231622 . + 0 ID=cds-WP_001067008.1;Parent=gene-AD11_RS20970;Dbxref=GenBank:WP_001067008.1;Name=WP_001067008.1;gbkey=CDS;gene=yhcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417686.1;locus_tag=AD11_RS20970;product=DUF1120 domain-containing protein;protein_id=WP_001067008.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 231807 232934 . + . ID=gene-AD11_RS20975;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=AD11_RS20975;old_locus_tag=AD11_3602 NZ_JJLL01000149.1 Protein Homology CDS 231807 232934 . + 0 ID=cds-WP_000445116.1;Parent=gene-AD11_RS20975;Dbxref=GenBank:WP_000445116.1;Name=WP_000445116.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;gene=yhcG;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417687.1;locus_tag=AD11_RS20975;product=PDDEXK nuclease domain-containing protein;protein_id=WP_000445116.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 232994 233458 . - . ID=gene-AD11_RS20980;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AD11_RS20980;old_locus_tag=AD11_3603 NZ_JJLL01000149.1 Protein Homology CDS 232994 233458 . - 0 ID=cds-WP_000979882.1;Parent=gene-AD11_RS20980;Dbxref=GenBank:WP_000979882.1;Name=WP_000979882.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=AD11_RS20980;product=N-acetylneuraminate anomerase;protein_id=WP_000979882.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 233455 234330 . - . ID=gene-AD11_RS20985;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AD11_RS20985;old_locus_tag=AD11_3604 NZ_JJLL01000149.1 Protein Homology CDS 233455 234330 . - 0 ID=cds-WP_000209011.1;Parent=gene-AD11_RS20985;Dbxref=GenBank:WP_000209011.1;Name=WP_000209011.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AD11_RS20985;product=N-acetylmannosamine kinase;protein_id=WP_000209011.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 234327 235016 . - . ID=gene-AD11_RS20990;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=AD11_RS20990;old_locus_tag=AD11_3605 NZ_JJLL01000149.1 Protein Homology CDS 234327 235016 . - 0 ID=cds-WP_000054239.1;Parent=gene-AD11_RS20990;Dbxref=GenBank:WP_000054239.1;Name=WP_000054239.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=AD11_RS20990;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054239.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 235064 236554 . - . ID=gene-AD11_RS20995;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AD11_RS20995;old_locus_tag=AD11_3606 NZ_JJLL01000149.1 Protein Homology CDS 235064 236554 . - 0 ID=cds-WP_000108459.1;Parent=gene-AD11_RS20995;Dbxref=GenBank:WP_000108459.1;Name=WP_000108459.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AD11_RS20995;product=sialic acid transporter NanT;protein_id=WP_000108459.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 236664 237557 . - . ID=gene-AD11_RS21000;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AD11_RS21000;old_locus_tag=AD11_3607 NZ_JJLL01000149.1 Protein Homology CDS 236664 237557 . - 0 ID=cds-WP_000224714.1;Parent=gene-AD11_RS21000;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AD11_RS21000;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 237679 238470 . - . ID=gene-AD11_RS21005;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AD11_RS21005;old_locus_tag=AD11_3608 NZ_JJLL01000149.1 Protein Homology CDS 237679 238470 . - 0 ID=cds-WP_000523845.1;Parent=gene-AD11_RS21005;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AD11_RS21005;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 238850 240217 . + . ID=gene-AD11_RS21010;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AD11_RS21010;old_locus_tag=AD11_3609 NZ_JJLL01000149.1 Protein Homology CDS 238850 240217 . + 0 ID=cds-WP_000467018.1;Parent=gene-AD11_RS21010;Dbxref=GenBank:WP_000467018.1;Name=WP_000467018.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AD11_RS21010;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000467018.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 240259 240756 . - . ID=gene-AD11_RS21015;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AD11_RS21015;old_locus_tag=AD11_3610 NZ_JJLL01000149.1 Protein Homology CDS 240259 240756 . - 0 ID=cds-WP_000366126.1;Parent=gene-AD11_RS21015;Dbxref=GenBank:WP_000366126.1;Name=WP_000366126.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AD11_RS21015;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366126.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 240762 241400 . - . ID=gene-AD11_RS21020;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AD11_RS21020;old_locus_tag=AD11_3611 NZ_JJLL01000149.1 Protein Homology CDS 240762 241400 . - 0 ID=cds-WP_000257293.1;Parent=gene-AD11_RS21020;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AD11_RS21020;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 241795 242187 . - . ID=gene-AD11_RS21025;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AD11_RS21025;old_locus_tag=AD11_3612 NZ_JJLL01000149.1 Protein Homology CDS 241795 242187 . - 0 ID=cds-WP_000829818.1;Parent=gene-AD11_RS21025;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AD11_RS21025;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 242203 242631 . - . ID=gene-AD11_RS21030;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AD11_RS21030;old_locus_tag=AD11_3613 NZ_JJLL01000149.1 Protein Homology CDS 242203 242631 . - 0 ID=cds-WP_000847559.1;Parent=gene-AD11_RS21030;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AD11_RS21030;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 242850 243977 . - . ID=gene-AD11_RS21035;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AD11_RS21035;old_locus_tag=AD11_3614 NZ_JJLL01000149.1 Protein Homology CDS 242850 243977 . - 0 ID=cds-WP_001190802.1;Parent=gene-AD11_RS21035;Dbxref=GenBank:WP_001190802.1;Name=WP_001190802.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709029.1;locus_tag=AD11_RS21035;product=cell division protein ZapE;protein_id=WP_001190802.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 244171 244569 . + . ID=gene-AD11_RS21040;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AD11_RS21040;old_locus_tag=AD11_3615 NZ_JJLL01000149.1 Protein Homology CDS 244171 244569 . + 0 ID=cds-WP_001295270.1;Parent=gene-AD11_RS21040;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AD11_RS21040;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 244723 246090 . + . ID=gene-AD11_RS21045;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AD11_RS21045;old_locus_tag=AD11_3616 NZ_JJLL01000149.1 Protein Homology CDS 244723 246090 . + 0 ID=cds-WP_001618875.1;Parent=gene-AD11_RS21045;Dbxref=GenBank:WP_001618875.1;Name=WP_001618875.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AD11_RS21045;product=serine endoprotease DegQ;protein_id=WP_001618875.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 246180 247247 . + . ID=gene-AD11_RS21050;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AD11_RS21050;old_locus_tag=AD11_3617 NZ_JJLL01000149.1 Protein Homology CDS 246180 247247 . + 0 ID=cds-WP_000497723.1;Parent=gene-AD11_RS21050;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AD11_RS21050;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 247310 248248 . - . ID=gene-AD11_RS21055;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AD11_RS21055;old_locus_tag=AD11_3618 NZ_JJLL01000149.1 Protein Homology CDS 247310 248248 . - 0 ID=cds-WP_001295272.1;Parent=gene-AD11_RS21055;Dbxref=GenBank:WP_001295272.1;Name=WP_001295272.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AD11_RS21055;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 248683 249153 . + . ID=gene-AD11_RS21060;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AD11_RS21060;old_locus_tag=AD11_3619 NZ_JJLL01000149.1 Protein Homology CDS 248683 249153 . + 0 ID=cds-WP_001257846.1;Parent=gene-AD11_RS21060;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AD11_RS21060;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 249518 249781 . + . ID=gene-AD11_RS21065;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AD11_RS21065;old_locus_tag=AD11_3620 NZ_JJLL01000149.1 Protein Homology CDS 249518 249781 . + 0 ID=cds-WP_000695690.1;Parent=gene-AD11_RS21065;Dbxref=GenBank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AD11_RS21065;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 249837 250109 . - . ID=gene-AD11_RS21070;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=AD11_RS21070;old_locus_tag=AD11_3621 NZ_JJLL01000149.1 Protein Homology CDS 249837 250109 . - 0 ID=cds-WP_001029005.1;Parent=gene-AD11_RS21070;Dbxref=GenBank:WP_001029005.1;Name=WP_001029005.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AD11_RS21070;product=barstar family protein;protein_id=WP_001029005.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 250201 252168 . - . ID=gene-AD11_RS21075;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AD11_RS21075;old_locus_tag=AD11_3622 NZ_JJLL01000149.1 Protein Homology CDS 250201 252168 . - 0 ID=cds-WP_001384240.1;Parent=gene-AD11_RS21075;Dbxref=GenBank:WP_001384240.1;Name=WP_001384240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709037.1;locus_tag=AD11_RS21075;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_001384240.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 252174 253106 . - . ID=gene-AD11_RS21080;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AD11_RS21080;old_locus_tag=AD11_3623 NZ_JJLL01000149.1 Protein Homology CDS 252174 253106 . - 0 ID=cds-WP_000854021.1;Parent=gene-AD11_RS21080;Dbxref=GenBank:WP_000854021.1;Name=WP_000854021.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AD11_RS21080;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854021.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 253114 253317 . - . ID=gene-AD11_RS21085;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AD11_RS21085;old_locus_tag=AD11_3624 NZ_JJLL01000149.1 Protein Homology CDS 253114 253317 . - 0 ID=cds-WP_000051841.1;Parent=gene-AD11_RS21085;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AD11_RS21085;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 253500 254429 . + . ID=gene-AD11_RS21090;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AD11_RS21090;old_locus_tag=AD11_3625 NZ_JJLL01000149.1 Protein Homology CDS 253500 254429 . + 0 ID=cds-WP_001507975.1;Parent=gene-AD11_RS21090;Dbxref=GenBank:WP_001507975.1;Name=WP_001507975.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AD11_RS21090;product=HTH-type transcriptional activator AaeR;protein_id=WP_001507975.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 254563 256008 . - . ID=gene-AD11_RS21095;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AD11_RS21095;old_locus_tag=AD11_3626 NZ_JJLL01000149.1 Protein Homology CDS 254563 256008 . - 0 ID=cds-WP_000055909.1;Parent=gene-AD11_RS21095;Dbxref=GenBank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AD11_RS21095;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 256620 260420 . - . ID=gene-AD11_RS21100;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AD11_RS21100;old_locus_tag=AD11_3627 NZ_JJLL01000149.1 Protein Homology CDS 256620 260420 . - 0 ID=cds-WP_001253618.1;Parent=gene-AD11_RS21100;Dbxref=GenBank:WP_001253618.1;Name=WP_001253618.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AD11_RS21100;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253618.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 260488 261957 . - . ID=gene-AD11_RS21105;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AD11_RS21105;old_locus_tag=AD11_3628 NZ_JJLL01000149.1 Protein Homology CDS 260488 261957 . - 0 ID=cds-WP_000123197.1;Parent=gene-AD11_RS21105;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AD11_RS21105;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 261947 262540 . - . ID=gene-AD11_RS21110;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AD11_RS21110;old_locus_tag=AD11_3629 NZ_JJLL01000149.1 Protein Homology CDS 261947 262540 . - 0 ID=cds-WP_001618876.1;Parent=gene-AD11_RS21110;Dbxref=GenBank:WP_001618876.1;Name=WP_001618876.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417714.1;locus_tag=AD11_RS21110;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_001618876.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 262549 263037 . - . ID=gene-AD11_RS21115;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AD11_RS21115;old_locus_tag=AD11_3630 NZ_JJLL01000149.1 Protein Homology CDS 262549 263037 . - 0 ID=cds-WP_000179409.1;Parent=gene-AD11_RS21115;Dbxref=GenBank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AD11_RS21115;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 263037 264140 . - . ID=gene-AD11_RS21120;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AD11_RS21120;old_locus_tag=AD11_3631 NZ_JJLL01000149.1 Protein Homology CDS 263037 264140 . - 0 ID=cds-WP_000802511.1;Parent=gene-AD11_RS21120;Dbxref=GenBank:WP_000802511.1;Name=WP_000802511.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417716.1;locus_tag=AD11_RS21120;product=rod shape-determining protein MreC;protein_id=WP_000802511.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 264206 265249 . - . ID=gene-AD11_RS21125;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AD11_RS21125;old_locus_tag=AD11_3632 NZ_JJLL01000149.1 Protein Homology CDS 264206 265249 . - 0 ID=cds-WP_000913396.1;Parent=gene-AD11_RS21125;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AD11_RS21125;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 265554 267494 . - . ID=gene-AD11_RS21135;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AD11_RS21135;old_locus_tag=AD11_3633 NZ_JJLL01000149.1 Protein Homology CDS 265554 267494 . - 0 ID=cds-WP_001241469.1;Parent=gene-AD11_RS21135;Dbxref=GenBank:WP_001241469.1;Name=WP_001241469.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AD11_RS21135;product=RNase E specificity factor CsrD;protein_id=WP_001241469.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 267646 268620 . + . ID=gene-AD11_RS21140;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=AD11_RS21140;old_locus_tag=AD11_3634 NZ_JJLL01000149.1 Protein Homology CDS 267646 268620 . + 0 ID=cds-WP_001148481.1;Parent=gene-AD11_RS21140;Dbxref=GenBank:WP_001148481.1;Name=WP_001148481.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;gene=yhdH;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417719.1;locus_tag=AD11_RS21140;product=MDR family oxidoreductase;protein_id=WP_001148481.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 269598 270068 . + . ID=gene-AD11_RS21160;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AD11_RS21160;old_locus_tag=AD11_3637 NZ_JJLL01000149.1 Protein Homology CDS 269598 270068 . + 0 ID=cds-WP_000354622.1;Parent=gene-AD11_RS21160;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AD11_RS21160;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 270079 271428 . + . ID=gene-AD11_RS21165;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AD11_RS21165;old_locus_tag=AD11_3638 NZ_JJLL01000149.1 Protein Homology CDS 270079 271428 . + 0 ID=cds-WP_000884639.1;Parent=gene-AD11_RS21165;Dbxref=GenBank:WP_000884639.1;Name=WP_000884639.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AD11_RS21165;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 271537 271779 . + . ID=gene-AD11_RS21170;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=AD11_RS21170;old_locus_tag=AD11_3639 NZ_JJLL01000149.1 Protein Homology CDS 271537 271779 . + 0 ID=cds-WP_000381173.1;Parent=gene-AD11_RS21170;Dbxref=GenBank:WP_000381173.1;Name=WP_000381173.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417723.1;locus_tag=AD11_RS21170;product=YhdT family protein;protein_id=WP_000381173.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 271769 273220 . + . ID=gene-AD11_RS21175;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AD11_RS21175;old_locus_tag=AD11_3640 NZ_JJLL01000149.1 Protein Homology CDS 271769 273220 . + 0 ID=cds-WP_001175728.1;Parent=gene-AD11_RS21175;Dbxref=GenBank:WP_001175728.1;Name=WP_001175728.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AD11_RS21175;product=sodium/pantothenate symporter;protein_id=WP_001175728.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 273232 274113 . + . ID=gene-AD11_RS21180;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AD11_RS21180;old_locus_tag=AD11_3641 NZ_JJLL01000149.1 Protein Homology CDS 273232 274113 . + 0 ID=cds-WP_001145827.1;Parent=gene-AD11_RS21180;Dbxref=GenBank:WP_001145827.1;Name=WP_001145827.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AD11_RS21180;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145827.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 274442 275407 . + . ID=gene-AD11_RS21185;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AD11_RS21185;old_locus_tag=AD11_3642 NZ_JJLL01000149.1 Protein Homology CDS 274442 275407 . + 0 ID=cds-WP_001219652.1;Parent=gene-AD11_RS21185;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AD11_RS21185;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 275433 275729 . + . ID=gene-AD11_RS21190;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AD11_RS21190;old_locus_tag=AD11_3643 NZ_JJLL01000149.1 Protein Homology CDS 275433 275729 . + 0 ID=cds-WP_000462905.1;Parent=gene-AD11_RS21190;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AD11_RS21190;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 275815 276699 . + . ID=gene-AD11_RS21195;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AD11_RS21195;old_locus_tag=AD11_3644 NZ_JJLL01000149.1 Protein Homology CDS 275815 276699 . + 0 ID=cds-WP_001258900.1;Parent=gene-AD11_RS21195;Dbxref=GenBank:WP_001258900.1;Name=WP_001258900.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417728.4;locus_tag=AD11_RS21195;product=adenine-specific DNA-methyltransferase;protein_id=WP_001258900.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 276783 276962 . + . ID=gene-AD11_RS21200;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=AD11_RS21200 NZ_JJLL01000149.1 Protein Homology CDS 276783 276962 . + 0 ID=cds-WP_001355779.1;Parent=gene-AD11_RS21200;Dbxref=GenBank:WP_001355779.1;Name=WP_001355779.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AD11_RS21200;product=DUF2556 family protein;protein_id=WP_001355779.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 276965 277627 . - . ID=gene-AD11_RS21205;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AD11_RS21205;old_locus_tag=AD11_3646 NZ_JJLL01000149.1 Protein Homology CDS 276965 277627 . - 0 ID=cds-WP_001556266.1;Parent=gene-AD11_RS21205;Dbxref=GenBank:WP_001556266.1;Name=WP_001556266.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AD11_RS21205;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001556266.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 278026 279183 . + . ID=gene-AD11_RS21210;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AD11_RS21210;old_locus_tag=AD11_3647 NZ_JJLL01000149.1 Protein Homology CDS 278026 279183 . + 0 ID=cds-WP_000160334.1;Parent=gene-AD11_RS21210;Dbxref=GenBank:WP_000160334.1;Name=WP_000160334.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AD11_RS21210;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_000160334.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 279195 282299 . + . ID=gene-AD11_RS21215;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AD11_RS21215;old_locus_tag=AD11_3648 NZ_JJLL01000149.1 Protein Homology CDS 279195 282299 . + 0 ID=cds-WP_033865767.1;Parent=gene-AD11_RS21215;Dbxref=GenBank:WP_033865767.1;Name=WP_033865767.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AD11_RS21215;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_033865767.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 282552 282773 . + . ID=gene-AD11_RS21220;Name=AD11_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS21220;old_locus_tag=AD11_3649 NZ_JJLL01000149.1 Protein Homology CDS 282552 282773 . + 0 ID=cds-WP_000825639.1;Parent=gene-AD11_RS21220;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AD11_RS21220;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 283204 284229 . + . ID=gene-AD11_RS21230;Name=AD11_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS21230;old_locus_tag=AD11_3651 NZ_JJLL01000149.1 Protein Homology CDS 283204 284229 . + 0 ID=cds-WP_000738568.1;Parent=gene-AD11_RS21230;Dbxref=GenBank:WP_000738568.1;Name=WP_000738568.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AD11_RS21230;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738568.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 284297 285478 . + . ID=gene-AD11_RS21235;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=AD11_RS21235;old_locus_tag=AD11_3652 NZ_JJLL01000149.1 Protein Homology CDS 284297 285478 . + 0 ID=cds-WP_000019655.1;Parent=gene-AD11_RS21235;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yhdX;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AD11_RS21235;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 285488 286591 . + . ID=gene-AD11_RS21240;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=AD11_RS21240;old_locus_tag=AD11_3653 NZ_JJLL01000149.1 Protein Homology CDS 285488 286591 . + 0 ID=cds-WP_001301413.1;Parent=gene-AD11_RS21240;Dbxref=GenBank:WP_001301413.1;Name=WP_001301413.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdY;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417736.2;locus_tag=AD11_RS21240;product=amino acid ABC transporter permease;protein_id=WP_001301413.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 286599 287357 . + . ID=gene-AD11_RS21245;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=AD11_RS21245;old_locus_tag=AD11_3654 NZ_JJLL01000149.1 Protein Homology CDS 286599 287357 . + 0 ID=cds-WP_000078349.1;Parent=gene-AD11_RS21245;Dbxref=GenBank:WP_000078349.1;Name=WP_000078349.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdZ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417737.1;locus_tag=AD11_RS21245;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078349.1;transl_table=11 NZ_JJLL01000149.1 RefSeq gene 287588 287703 . - . ID=gene-AD11_RS21250;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS21250;old_locus_tag=AD11_3655 NZ_JJLL01000149.1 cmsearch rRNA 287588 287703 . - . ID=rna-AD11_RS21250;Parent=gene-AD11_RS21250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21250;product=5S ribosomal RNA NZ_JJLL01000149.1 cmsearch exon 287588 287703 . - . ID=exon-AD11_RS21250-1;Parent=rna-AD11_RS21250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21250;product=5S ribosomal RNA NZ_JJLL01000149.1 RefSeq gene 287743 287818 . - . ID=gene-AD11_RS21255;Name=AD11_RS21255;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS21255;old_locus_tag=AD11_3656 NZ_JJLL01000149.1 tRNAscan-SE tRNA 287743 287818 . - . ID=rna-AD11_RS21255;Parent=gene-AD11_RS21255;anticodon=(pos:complement(287783..287785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21255;product=tRNA-Thr NZ_JJLL01000149.1 tRNAscan-SE exon 287743 287818 . - . ID=exon-AD11_RS21255-1;Parent=rna-AD11_RS21255;anticodon=(pos:complement(287783..287785));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21255;product=tRNA-Thr NZ_JJLL01000149.1 RefSeq gene 287833 287948 . - . ID=gene-AD11_RS21260;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS21260;old_locus_tag=AD11_3657 NZ_JJLL01000149.1 cmsearch rRNA 287833 287948 . - . ID=rna-AD11_RS21260;Parent=gene-AD11_RS21260;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21260;product=5S ribosomal RNA NZ_JJLL01000149.1 cmsearch exon 287833 287948 . - . ID=exon-AD11_RS21260-1;Parent=rna-AD11_RS21260;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21260;product=5S ribosomal RNA NZ_JJLL01000149.1 RefSeq gene 287988 288063 . - . ID=gene-AD11_RS21265;Name=AD11_RS21265;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS21265;old_locus_tag=AD11_3658 NZ_JJLL01000149.1 tRNAscan-SE tRNA 287988 288063 . - . ID=rna-AD11_RS21265;Parent=gene-AD11_RS21265;anticodon=(pos:complement(288028..288030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21265;product=tRNA-Thr NZ_JJLL01000149.1 tRNAscan-SE exon 287988 288063 . - . ID=exon-AD11_RS21265-1;Parent=rna-AD11_RS21265;anticodon=(pos:complement(288028..288030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21265;product=tRNA-Thr NZ_JJLL01000149.1 RefSeq gene 288078 288193 . - . ID=gene-AD11_RS21270;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS21270;old_locus_tag=AD11_3659 NZ_JJLL01000149.1 cmsearch rRNA 288078 288193 . - . ID=rna-AD11_RS21270;Parent=gene-AD11_RS21270;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21270;product=5S ribosomal RNA NZ_JJLL01000149.1 cmsearch exon 288078 288193 . - . ID=exon-AD11_RS21270-1;Parent=rna-AD11_RS21270;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21270;product=5S ribosomal RNA ##sequence-region NZ_JJLL01000150.1 1 559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000150.1 RefSeq region 1 559 . + . ID=NZ_JJLL01000150.1:1..559;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000150.1 RefSeq gene 1 218 . + . ID=gene-AD11_RS21290;Name=AD11_RS21290;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS21290;partial=true;start_range=.,1 NZ_JJLL01000150.1 cmsearch rRNA 1 218 . + . ID=rna-AD11_RS21290;Parent=gene-AD11_RS21290;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21290;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLL01000150.1 cmsearch exon 1 218 . + . ID=exon-AD11_RS21290-1;Parent=rna-AD11_RS21290;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS21290;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLL01000150.1 RefSeq gene 287 363 . + . ID=gene-AD11_RS21295;Name=AD11_RS21295;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS21295;old_locus_tag=AD11_3660 NZ_JJLL01000150.1 tRNAscan-SE tRNA 287 363 . + . ID=rna-AD11_RS21295;Parent=gene-AD11_RS21295;anticodon=(pos:321..323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21295;product=tRNA-Ile NZ_JJLL01000150.1 tRNAscan-SE exon 287 363 . + . ID=exon-AD11_RS21295-1;Parent=rna-AD11_RS21295;anticodon=(pos:321..323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21295;product=tRNA-Ile NZ_JJLL01000150.1 RefSeq gene 406 481 . + . ID=gene-AD11_RS21300;Name=AD11_RS21300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS21300;old_locus_tag=AD11_3661 NZ_JJLL01000150.1 tRNAscan-SE tRNA 406 481 . + . ID=rna-AD11_RS21300;Parent=gene-AD11_RS21300;anticodon=(pos:439..441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21300;product=tRNA-Ala NZ_JJLL01000150.1 tRNAscan-SE exon 406 481 . + . ID=exon-AD11_RS21300-1;Parent=rna-AD11_RS21300;anticodon=(pos:439..441);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS21300;product=tRNA-Ala ##sequence-region NZ_JJLL01000151.1 1 182660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000151.1 RefSeq region 1 182660 . + . ID=NZ_JJLL01000151.1:1..182660;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000151.1 RefSeq gene 587 2176 . + . ID=gene-AD11_RS21305;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AD11_RS21305;old_locus_tag=AD11_3663 NZ_JJLL01000151.1 Protein Homology CDS 587 2176 . + 0 ID=cds-WP_033865775.1;Parent=gene-AD11_RS21305;Dbxref=GenBank:WP_033865775.1;Name=WP_033865775.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AD11_RS21305;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_033865775.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 2188 3477 . + . ID=gene-AD11_RS21310;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AD11_RS21310;old_locus_tag=AD11_3664 NZ_JJLL01000151.1 Protein Homology CDS 2188 3477 . + 0 ID=cds-WP_033865777.1;Parent=gene-AD11_RS21310;Dbxref=GenBank:WP_033865777.1;Name=WP_033865777.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AD11_RS21310;product=phosphoribosylamine--glycine ligase;protein_id=WP_033865777.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 3474 4799 . - . ID=gene-AD11_RS21315;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AD11_RS21315;old_locus_tag=AD11_3665 NZ_JJLL01000151.1 Protein Homology CDS 3474 4799 . - 0 ID=cds-WP_033865778.1;Parent=gene-AD11_RS21315;Dbxref=GenBank:WP_033865778.1;Name=WP_033865778.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AD11_RS21315;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_033865778.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 4796 6172 . - . ID=gene-AD11_RS21320;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AD11_RS21320;old_locus_tag=AD11_3666 NZ_JJLL01000151.1 Protein Homology CDS 4796 6172 . - 0 ID=cds-WP_001211923.1;Parent=gene-AD11_RS21320;Dbxref=GenBank:WP_001211923.1;Name=WP_001211923.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709797.1;locus_tag=AD11_RS21320;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211923.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 6410 6829 . + . ID=gene-AD11_RS21325;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AD11_RS21325;old_locus_tag=AD11_3668 NZ_JJLL01000151.1 Protein Homology CDS 6410 6829 . + 0 ID=cds-WP_001296714.1;Parent=gene-AD11_RS21325;Dbxref=GenBank:WP_001296714.1;Name=WP_001296714.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AD11_RS21325;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_001296714.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 6831 7526 . - . ID=gene-AD11_RS21330;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AD11_RS21330;old_locus_tag=AD11_3669 NZ_JJLL01000151.1 Protein Homology CDS 6831 7526 . - 0 ID=cds-WP_001300651.1;Parent=gene-AD11_RS21330;Dbxref=GenBank:WP_001300651.1;Name=WP_001300651.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709795.2;locus_tag=AD11_RS21330;product=DUF1481 domain-containing protein;protein_id=WP_001300651.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 7539 7811 . - . ID=gene-AD11_RS21335;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AD11_RS21335;old_locus_tag=AD11_3670 NZ_JJLL01000151.1 Protein Homology CDS 7539 7811 . - 0 ID=cds-WP_001044513.1;Parent=gene-AD11_RS21335;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AD11_RS21335;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 7998 8588 . - . ID=gene-AD11_RS21340;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AD11_RS21340;old_locus_tag=AD11_3671 NZ_JJLL01000151.1 Protein Homology CDS 7998 8588 . - 0 ID=cds-WP_000940106.1;Parent=gene-AD11_RS21340;Dbxref=GenBank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AD11_RS21340;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 8631 9302 . - . ID=gene-AD11_RS21345;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AD11_RS21345;old_locus_tag=AD11_3672 NZ_JJLL01000151.1 Protein Homology CDS 8631 9302 . - 0 ID=cds-WP_000362388.1;Parent=gene-AD11_RS21345;Dbxref=GenBank:WP_000362388.1;Name=WP_000362388.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AD11_RS21345;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 9312 10376 . - . ID=gene-AD11_RS21350;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AD11_RS21350;old_locus_tag=AD11_3673 NZ_JJLL01000151.1 Protein Homology CDS 9312 10376 . - 0 ID=cds-WP_033865780.1;Parent=gene-AD11_RS21350;Dbxref=GenBank:WP_033865780.1;Name=WP_033865780.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AD11_RS21350;product=uroporphyrinogen decarboxylase;protein_id=WP_033865780.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 10416 11189 . - . ID=gene-AD11_RS21355;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AD11_RS21355;old_locus_tag=AD11_3674 NZ_JJLL01000151.1 Protein Homology CDS 10416 11189 . - 0 ID=cds-WP_000373940.1;Parent=gene-AD11_RS21355;Dbxref=GenBank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AD11_RS21355;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 11284 11760 . + . ID=gene-AD11_RS21360;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AD11_RS21360;old_locus_tag=AD11_3675 NZ_JJLL01000151.1 Protein Homology CDS 11284 11760 . + 0 ID=cds-WP_000934302.1;Parent=gene-AD11_RS21360;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AD11_RS21360;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JJLL01000151.1 cmsearch riboswitch 11813 11913 . + . ID=id-NZ_JJLL01000151.1:11813..11913;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLL01000151.1 RefSeq gene 11994 13889 . + . ID=gene-AD11_RS21365;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AD11_RS21365;old_locus_tag=AD11_3676 NZ_JJLL01000151.1 Protein Homology CDS 11994 13889 . + 0 ID=cds-WP_001276903.1;Parent=gene-AD11_RS21365;Dbxref=GenBank:WP_001276903.1;Name=WP_001276903.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312944.1;locus_tag=AD11_RS21365;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_001276903.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 13889 14524 . + . ID=gene-AD11_RS21370;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AD11_RS21370;old_locus_tag=AD11_3677 NZ_JJLL01000151.1 Protein Homology CDS 13889 14524 . + 0 ID=cds-WP_000284615.1;Parent=gene-AD11_RS21370;Dbxref=GenBank:WP_000284615.1;Name=WP_000284615.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418421.1;locus_tag=AD11_RS21370;product=thiamine phosphate synthase;protein_id=WP_000284615.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 14517 15272 . + . ID=gene-AD11_RS21375;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AD11_RS21375;old_locus_tag=AD11_3678 NZ_JJLL01000151.1 Protein Homology CDS 14517 15272 . + 0 ID=cds-WP_000999731.1;Parent=gene-AD11_RS21375;Dbxref=GenBank:WP_000999731.1;Name=WP_000999731.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AD11_RS21375;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999731.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 15256 15456 . + . ID=gene-AD11_RS21380;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AD11_RS21380;old_locus_tag=AD11_3679 NZ_JJLL01000151.1 Protein Homology CDS 15256 15456 . + 0 ID=cds-WP_001166226.1;Parent=gene-AD11_RS21380;Dbxref=GenBank:WP_001166226.1;Name=WP_001166226.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=AD11_RS21380;product=sulfur carrier protein ThiS;protein_id=WP_001166226.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 15458 16228 . + . ID=gene-AD11_RS21385;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AD11_RS21385;old_locus_tag=AD11_3680 NZ_JJLL01000151.1 Protein Homology CDS 15458 16228 . + 0 ID=cds-WP_000944104.1;Parent=gene-AD11_RS21385;Dbxref=GenBank:WP_000944104.1;Name=WP_000944104.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AD11_RS21385;product=thiazole synthase;protein_id=WP_000944104.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 16225 17358 . + . ID=gene-AD11_RS21390;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AD11_RS21390;old_locus_tag=AD11_3681 NZ_JJLL01000151.1 Protein Homology CDS 16225 17358 . + 0 ID=cds-WP_000847447.1;Parent=gene-AD11_RS21390;Dbxref=GenBank:WP_000847447.1;Name=WP_000847447.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AD11_RS21390;product=2-iminoacetate synthase ThiH;protein_id=WP_000847447.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 17768 18307 . - . ID=gene-AD11_RS21395;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AD11_RS21395;old_locus_tag=AD11_3682 NZ_JJLL01000151.1 Protein Homology CDS 17768 18307 . - 0 ID=cds-WP_001491438.1;Parent=gene-AD11_RS21395;Dbxref=GenBank:WP_001491438.1;Name=WP_001491438.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AD11_RS21395;product=heat-shock protein C;protein_id=WP_001491438.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 18520 22743 . - . ID=gene-AD11_RS21400;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AD11_RS21400;old_locus_tag=AD11_3683 NZ_JJLL01000151.1 Protein Homology CDS 18520 22743 . - 0 ID=cds-WP_000653944.1;Parent=gene-AD11_RS21400;Dbxref=GenBank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AD11_RS21400;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 22820 26848 . - . ID=gene-AD11_RS21405;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AD11_RS21405;old_locus_tag=AD11_3684 NZ_JJLL01000151.1 Protein Homology CDS 22820 26848 . - 0 ID=cds-WP_000263098.1;Parent=gene-AD11_RS21405;Dbxref=GenBank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AD11_RS21405;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 27168 27533 . - . ID=gene-AD11_RS21410;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AD11_RS21410;old_locus_tag=AD11_3685 NZ_JJLL01000151.1 Protein Homology CDS 27168 27533 . - 0 ID=cds-WP_000028878.1;Parent=gene-AD11_RS21410;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AD11_RS21410;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 27600 28097 . - . ID=gene-AD11_RS21415;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AD11_RS21415;old_locus_tag=AD11_3686 NZ_JJLL01000151.1 Protein Homology CDS 27600 28097 . - 0 ID=cds-WP_001207201.1;Parent=gene-AD11_RS21415;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AD11_RS21415;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 28510 29214 . - . ID=gene-AD11_RS21420;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AD11_RS21420;old_locus_tag=AD11_3687 NZ_JJLL01000151.1 Protein Homology CDS 28510 29214 . - 0 ID=cds-WP_001096684.1;Parent=gene-AD11_RS21420;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AD11_RS21420;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 29218 29646 . - . ID=gene-AD11_RS21425;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AD11_RS21425;old_locus_tag=AD11_3688 NZ_JJLL01000151.1 Protein Homology CDS 29218 29646 . - 0 ID=cds-WP_001085926.1;Parent=gene-AD11_RS21425;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AD11_RS21425;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 29805 30350 . - . ID=gene-AD11_RS21430;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AD11_RS21430;old_locus_tag=AD11_3689 NZ_JJLL01000151.1 Protein Homology CDS 29805 30350 . - 0 ID=cds-WP_001287516.1;Parent=gene-AD11_RS21430;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AD11_RS21430;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 30352 30735 . - . ID=gene-AD11_RS21435;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AD11_RS21435;old_locus_tag=AD11_3690 NZ_JJLL01000151.1 Protein Homology CDS 30352 30735 . - 0 ID=cds-WP_001275702.1;Parent=gene-AD11_RS21435;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AD11_RS21435;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 30965 32149 . - . ID=gene-AD11_RS21440;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AD11_RS21440;old_locus_tag=AD11_3691 NZ_JJLL01000151.1 Protein Homology CDS 30965 32149 . - 0 ID=cds-WP_000031784.1;Parent=gene-AD11_RS21440;Dbxref=GenBank:WP_000031784.1;Name=WP_000031784.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AD11_RS21440;product=elongation factor Tu;protein_id=WP_000031784.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 32220 34334 . - . ID=gene-AD11_RS21445;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AD11_RS21445;old_locus_tag=AD11_3692 NZ_JJLL01000151.1 Protein Homology CDS 32220 34334 . - 0 ID=cds-WP_000124700.1;Parent=gene-AD11_RS21445;Dbxref=GenBank:WP_000124700.1;Name=WP_000124700.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AD11_RS21445;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 34431 34901 . - . ID=gene-AD11_RS21450;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AD11_RS21450;old_locus_tag=AD11_3693 NZ_JJLL01000151.1 Protein Homology CDS 34431 34901 . - 0 ID=cds-WP_001138043.1;Parent=gene-AD11_RS21450;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AD11_RS21450;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 34998 35372 . - . ID=gene-AD11_RS21455;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AD11_RS21455;old_locus_tag=AD11_3694 NZ_JJLL01000151.1 Protein Homology CDS 34998 35372 . - 0 ID=cds-WP_000246815.1;Parent=gene-AD11_RS21455;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AD11_RS21455;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 35498 35785 . - . ID=gene-AD11_RS21460;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AD11_RS21460;old_locus_tag=AD11_3695 NZ_JJLL01000151.1 Protein Homology CDS 35498 35785 . - 0 ID=cds-WP_000903373.1;Parent=gene-AD11_RS21460;Dbxref=GenBank:WP_000903373.1;Name=WP_000903373.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417802.1;locus_tag=AD11_RS21460;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903373.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 35793 36152 . - . ID=gene-AD11_RS21465;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AD11_RS21465;old_locus_tag=AD11_3696 NZ_JJLL01000151.1 Protein Homology CDS 35793 36152 . - 0 ID=cds-WP_000820714.1;Parent=gene-AD11_RS21465;Dbxref=GenBank:WP_000820714.1;Name=WP_000820714.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AD11_RS21465;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820714.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 36152 36538 . - . ID=gene-AD11_RS21470;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AD11_RS21470;old_locus_tag=AD11_3697 NZ_JJLL01000151.1 Protein Homology CDS 36152 36538 . - 0 ID=cds-WP_001209680.1;Parent=gene-AD11_RS21470;Dbxref=GenBank:WP_001209680.1;Name=WP_001209680.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417804.1;locus_tag=AD11_RS21470;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209680.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 36538 37260 . - . ID=gene-AD11_RS21475;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=AD11_RS21475;old_locus_tag=AD11_3698 NZ_JJLL01000151.1 Protein Homology CDS 36538 37260 . - 0 ID=cds-WP_000091466.1;Parent=gene-AD11_RS21475;Dbxref=GenBank:WP_000091466.1;Name=WP_000091466.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;gene=yheO;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AD11_RS21475;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 37427 38239 . - . ID=gene-AD11_RS21480;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AD11_RS21480;old_locus_tag=AD11_3699 NZ_JJLL01000151.1 Protein Homology CDS 37427 38239 . - 0 ID=cds-WP_000838261.1;Parent=gene-AD11_RS21480;Dbxref=GenBank:WP_000838261.1;Name=WP_000838261.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312225.1;locus_tag=AD11_RS21480;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838261.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 38460 38678 . + . ID=gene-AD11_RS21485;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AD11_RS21485;old_locus_tag=AD11_3700 NZ_JJLL01000151.1 Protein Homology CDS 38460 38678 . + 0 ID=cds-WP_001153619.1;Parent=gene-AD11_RS21485;Dbxref=GenBank:WP_001153619.1;Name=WP_001153619.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AD11_RS21485;product=protein SlyX;protein_id=WP_001153619.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 38727 39317 . - . ID=gene-AD11_RS21490;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AD11_RS21490;old_locus_tag=AD11_3701 NZ_JJLL01000151.1 Protein Homology CDS 38727 39317 . - 0 ID=cds-WP_000861334.1;Parent=gene-AD11_RS21490;Dbxref=GenBank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AD11_RS21490;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 39412 39612 . - . ID=gene-AD11_RS21495;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AD11_RS21495;old_locus_tag=AD11_3702 NZ_JJLL01000151.1 Protein Homology CDS 39412 39612 . - 0 ID=cds-WP_001007730.1;Parent=gene-AD11_RS21495;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AD11_RS21495;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 39622 41427 . - . ID=gene-AD11_RS21500;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AD11_RS21500;old_locus_tag=AD11_3703 NZ_JJLL01000151.1 Protein Homology CDS 39622 41427 . - 0 ID=cds-WP_032083481.1;Parent=gene-AD11_RS21500;Dbxref=GenBank:WP_032083481.1;Name=WP_032083481.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AD11_RS21500;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_032083481.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 41427 41978 . - . ID=gene-AD11_RS21505;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AD11_RS21505;old_locus_tag=AD11_3704 NZ_JJLL01000151.1 Protein Homology CDS 41427 41978 . - 0 ID=cds-WP_001384304.1;Parent=gene-AD11_RS21505;Dbxref=GenBank:WP_001384304.1;Name=WP_001384304.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AD11_RS21505;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001384304.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 42114 44027 . + . ID=gene-AD11_RS21510;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AD11_RS21510;old_locus_tag=AD11_3705 NZ_JJLL01000151.1 Protein Homology CDS 42114 44027 . + 0 ID=cds-WP_000634789.1;Parent=gene-AD11_RS21510;Dbxref=GenBank:WP_000634789.1;Name=WP_000634789.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AD11_RS21510;product=ABC transporter ATP-binding protein;protein_id=WP_000634789.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 44027 45049 . + . ID=gene-AD11_RS21515;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AD11_RS21515;old_locus_tag=AD11_3706 NZ_JJLL01000151.1 Protein Homology CDS 44027 45049 . + 0 ID=cds-WP_033865781.1;Parent=gene-AD11_RS21515;Dbxref=GenBank:WP_033865781.1;Name=WP_033865781.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312231.1;locus_tag=AD11_RS21515;product=hydrolase;protein_id=WP_033865781.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 45043 45261 . + . ID=gene-AD11_RS21520;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AD11_RS21520;old_locus_tag=AD11_3707 NZ_JJLL01000151.1 Protein Homology CDS 45043 45261 . + 0 ID=cds-WP_000907085.1;Parent=gene-AD11_RS21520;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AD11_RS21520;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 45315 46184 . + . ID=gene-AD11_RS21525;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AD11_RS21525;old_locus_tag=AD11_3708 NZ_JJLL01000151.1 Protein Homology CDS 45315 46184 . + 0 ID=cds-WP_001274680.1;Parent=gene-AD11_RS21525;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AD11_RS21525;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 46239 46643 . - . ID=gene-AD11_RS21530;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AD11_RS21530;old_locus_tag=AD11_3709 NZ_JJLL01000151.1 Protein Homology CDS 46239 46643 . - 0 ID=cds-WP_001148910.1;Parent=gene-AD11_RS21530;Dbxref=GenBank:WP_001148910.1;Name=WP_001148910.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AD11_RS21530;product=OsmC family protein;protein_id=WP_001148910.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 46945 47577 . + . ID=gene-AD11_RS21540;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AD11_RS21540;old_locus_tag=AD11_3710 NZ_JJLL01000151.1 Protein Homology CDS 46945 47577 . + 0 ID=cds-WP_000242755.1;Parent=gene-AD11_RS21540;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AD11_RS21540;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 47628 49718 . + . ID=gene-AD11_RS21545;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AD11_RS21545;old_locus_tag=AD11_3711 NZ_JJLL01000151.1 Protein Homology CDS 47628 49718 . + 0 ID=cds-WP_001531433.1;Parent=gene-AD11_RS21545;Dbxref=GenBank:WP_001531433.1;Name=WP_001531433.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AD11_RS21545;product=YccS/YhfK family putative transporter;protein_id=WP_001531433.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 49784 51004 . - . ID=gene-AD11_RS21550;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AD11_RS21550;old_locus_tag=AD11_3712 NZ_JJLL01000151.1 Protein Homology CDS 49784 51004 . - 0 ID=cds-WP_001618902.1;Parent=gene-AD11_RS21550;Dbxref=GenBank:WP_001618902.1;Name=WP_001618902.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709134.1;locus_tag=AD11_RS21550;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_001618902.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 51090 51653 . - . ID=gene-AD11_RS21555;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AD11_RS21555;old_locus_tag=AD11_3713 NZ_JJLL01000151.1 Protein Homology CDS 51090 51653 . - 0 ID=cds-WP_000601847.1;Parent=gene-AD11_RS21555;Dbxref=GenBank:WP_000601847.1;Name=WP_000601847.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AD11_RS21555;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601847.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 51685 52287 . - . ID=gene-AD11_RS21560;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AD11_RS21560;old_locus_tag=AD11_3714 NZ_JJLL01000151.1 Protein Homology CDS 51685 52287 . - 0 ID=cds-WP_001280624.1;Parent=gene-AD11_RS21560;Dbxref=GenBank:WP_001280624.1;Name=WP_001280624.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AD11_RS21560;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280624.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 52277 52444 . - . ID=gene-AD11_RS21565;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AD11_RS21565 NZ_JJLL01000151.1 Protein Homology CDS 52277 52444 . - 0 ID=cds-WP_000736860.1;Parent=gene-AD11_RS21565;Dbxref=GenBank:WP_000736860.1;Name=WP_000736860.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709137.1;locus_tag=AD11_RS21565;product=YhfG family protein;protein_id=WP_000736860.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 52549 53121 . - . ID=gene-AD11_RS21570;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AD11_RS21570;old_locus_tag=AD11_3715 NZ_JJLL01000151.1 Protein Homology CDS 52549 53121 . - 0 ID=cds-WP_033866523.1;Parent=gene-AD11_RS21570;Dbxref=GenBank:WP_033866523.1;Name=WP_033866523.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AD11_RS21570;product=peptidylprolyl isomerase A;protein_id=WP_033866523.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 53392 54573 . + . ID=gene-AD11_RS21575;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AD11_RS21575;old_locus_tag=AD11_3717 NZ_JJLL01000151.1 Protein Homology CDS 53392 54573 . + 0 ID=cds-WP_000185247.1;Parent=gene-AD11_RS21575;Dbxref=GenBank:WP_000185247.1;Name=WP_000185247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AD11_RS21575;product=MFS transporter TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 54835 57378 . + . ID=gene-AD11_RS21580;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AD11_RS21580;old_locus_tag=AD11_3719 NZ_JJLL01000151.1 Protein Homology CDS 54835 57378 . + 0 ID=cds-WP_000049208.1;Parent=gene-AD11_RS21580;Dbxref=GenBank:WP_000049208.1;Name=WP_000049208.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417824.1;locus_tag=AD11_RS21580;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049208.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 57375 57701 . + . ID=gene-AD11_RS21585;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AD11_RS21585;old_locus_tag=AD11_3720 NZ_JJLL01000151.1 Protein Homology CDS 57375 57701 . + 0 ID=cds-WP_000084764.1;Parent=gene-AD11_RS21585;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AD11_RS21585;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 57827 58633 . + . ID=gene-AD11_RS21590;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AD11_RS21590;old_locus_tag=AD11_3721 NZ_JJLL01000151.1 Protein Homology CDS 57827 58633 . + 0 ID=cds-WP_000493556.1;Parent=gene-AD11_RS21590;Dbxref=GenBank:WP_000493556.1;Name=WP_000493556.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AD11_RS21590;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 58652 60025 . + . ID=gene-AD11_RS21595;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AD11_RS21595;old_locus_tag=AD11_3722 NZ_JJLL01000151.1 Protein Homology CDS 58652 60025 . + 0 ID=cds-WP_000349855.1;Parent=gene-AD11_RS21595;Dbxref=GenBank:WP_000349855.1;Name=WP_000349855.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AD11_RS21595;product=siroheme synthase CysG;protein_id=WP_000349855.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 60272 60439 . + . ID=gene-AD11_RS21600;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=AD11_RS21600;old_locus_tag=AD11_3723 NZ_JJLL01000151.1 Protein Homology CDS 60272 60439 . + 0 ID=cds-WP_001031834.1;Parent=gene-AD11_RS21600;Dbxref=GenBank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AD11_RS21600;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 60734 62071 . + . ID=gene-AD11_RS21605;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=AD11_RS21605;old_locus_tag=AD11_3724 NZ_JJLL01000151.1 Protein Homology CDS 60734 62071 . + 0 ID=cds-WP_000535505.1;Parent=gene-AD11_RS21605;Dbxref=GenBank:WP_000535505.1;Name=WP_000535505.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417829.2;locus_tag=AD11_RS21605;product=fructoselysine/psicoselysine transporter;protein_id=WP_000535505.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 62092 63114 . + . ID=gene-AD11_RS21610;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=AD11_RS21610;old_locus_tag=AD11_3725 NZ_JJLL01000151.1 Protein Homology CDS 62092 63114 . + 0 ID=cds-WP_001295163.1;Parent=gene-AD11_RS21610;Dbxref=GenBank:WP_001295163.1;Name=WP_001295163.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=AD11_RS21610;product=fructoselysine 6-phosphate deglycase;protein_id=WP_001295163.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 63164 63994 . + . ID=gene-AD11_RS21615;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=AD11_RS21615;old_locus_tag=AD11_3726 NZ_JJLL01000151.1 Protein Homology CDS 63164 63994 . + 0 ID=cds-WP_000847837.1;Parent=gene-AD11_RS21615;Dbxref=GenBank:WP_000847837.1;Name=WP_000847837.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=AD11_RS21615;product=fructoselysine 3-epimerase;protein_id=WP_000847837.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 63991 64776 . + . ID=gene-AD11_RS21620;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=AD11_RS21620;old_locus_tag=AD11_3727 NZ_JJLL01000151.1 Protein Homology CDS 63991 64776 . + 0 ID=cds-WP_000853353.1;Parent=gene-AD11_RS21620;Dbxref=GenBank:WP_000853353.1;Name=WP_000853353.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417833.1;locus_tag=AD11_RS21620;product=fructoselysine 6-kinase;protein_id=WP_000853353.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 64876 65607 . + . ID=gene-AD11_RS21625;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=yhfR;locus_tag=AD11_RS21625;old_locus_tag=AD11_3728 NZ_JJLL01000151.1 Protein Homology CDS 64876 65607 . + 0 ID=cds-WP_001276847.1;Parent=gene-AD11_RS21625;Dbxref=GenBank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=AD11_RS21625;product=DNA-binding transcriptional regulator FrlR;protein_id=WP_001276847.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 65759 66844 . - . ID=gene-AD11_RS21630;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=AD11_RS21630;old_locus_tag=AD11_3729 NZ_JJLL01000151.1 Protein Homology CDS 65759 66844 . - 0 ID=cds-WP_000847144.1;Parent=gene-AD11_RS21630;Dbxref=GenBank:WP_000847144.1;Name=WP_000847144.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=AD11_RS21630;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_000847144.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 66856 68160 . - . ID=gene-AD11_RS21635;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=AD11_RS21635;old_locus_tag=AD11_3730 NZ_JJLL01000151.1 Protein Homology CDS 66856 68160 . - 0 ID=cds-WP_000366862.1;Parent=gene-AD11_RS21635;Dbxref=GenBank:WP_000366862.1;Name=WP_000366862.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417836.1;locus_tag=AD11_RS21635;product=YhfT family protein;protein_id=WP_000366862.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 68172 68525 . - . ID=gene-AD11_RS21640;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=AD11_RS21640;old_locus_tag=AD11_3731 NZ_JJLL01000151.1 Protein Homology CDS 68172 68525 . - 0 ID=cds-WP_000719728.1;Parent=gene-AD11_RS21640;Dbxref=GenBank:WP_000719728.1;Name=WP_000719728.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AD11_RS21640;product=DUF2620 domain-containing protein;protein_id=WP_000719728.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 68536 69414 . - . ID=gene-AD11_RS21645;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AD11_RS21645;old_locus_tag=AD11_3732 NZ_JJLL01000151.1 Protein Homology CDS 68536 69414 . - 0 ID=cds-WP_000007010.1;Parent=gene-AD11_RS21645;Dbxref=GenBank:WP_000007010.1;Name=WP_000007010.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AD11_RS21645;product=phosphotriesterase-related protein;protein_id=WP_000007010.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 69411 70637 . - . ID=gene-AD11_RS21650;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;locus_tag=AD11_RS21650;old_locus_tag=AD11_3733 NZ_JJLL01000151.1 Protein Homology CDS 69411 70637 . - 0 ID=cds-WP_000090611.1;Parent=gene-AD11_RS21650;Dbxref=GenBank:WP_000090611.1;Name=WP_000090611.1;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417839.1;locus_tag=AD11_RS21650;product=phosphopentomutase;protein_id=WP_000090611.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 70637 71800 . - . ID=gene-AD11_RS21655;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=AD11_RS21655;old_locus_tag=AD11_3734 NZ_JJLL01000151.1 Protein Homology CDS 70637 71800 . - 0 ID=cds-WP_000497334.1;Parent=gene-AD11_RS21655;Dbxref=GenBank:WP_000497334.1;Name=WP_000497334.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417840.1;locus_tag=AD11_RS21655;product=YhfX family PLP-dependent enzyme;protein_id=WP_000497334.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 71884 72246 . - . ID=gene-AD11_RS21660;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;locus_tag=AD11_RS21660;old_locus_tag=AD11_3735 NZ_JJLL01000151.1 Protein Homology CDS 71884 72246 . - 0 ID=cds-WP_001295165.1;Parent=gene-AD11_RS21660;Dbxref=GenBank:WP_001295165.1;Name=WP_001295165.1;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AD11_RS21660;product=PRD domain protein;protein_id=WP_001295165.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 72263 73168 . - . ID=gene-AD11_RS21665;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AD11_RS21665;old_locus_tag=AD11_3736 NZ_JJLL01000151.1 Protein Homology CDS 72263 73168 . - 0 ID=cds-WP_033865785.1;Parent=gene-AD11_RS21665;Dbxref=GenBank:WP_033865785.1;Name=WP_033865785.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AD11_RS21665;product=GntR family transcriptional regulator YhfZ;protein_id=WP_033865785.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 73458 74462 . - . ID=gene-AD11_RS21670;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AD11_RS21670;old_locus_tag=AD11_3738 NZ_JJLL01000151.1 Protein Homology CDS 73458 74462 . - 0 ID=cds-WP_000165552.1;Parent=gene-AD11_RS21670;Dbxref=GenBank:WP_000165552.1;Name=WP_000165552.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AD11_RS21670;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 74455 75213 . - . ID=gene-AD11_RS21675;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AD11_RS21675;old_locus_tag=AD11_3739 NZ_JJLL01000151.1 Protein Homology CDS 74455 75213 . - 0 ID=cds-WP_000032691.1;Parent=gene-AD11_RS21675;Dbxref=GenBank:WP_000032691.1;Name=WP_000032691.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312254.1;locus_tag=AD11_RS21675;product=phosphoglycolate phosphatase;protein_id=WP_000032691.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 75206 75883 . - . ID=gene-AD11_RS21680;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AD11_RS21680;old_locus_tag=AD11_3740 NZ_JJLL01000151.1 Protein Homology CDS 75206 75883 . - 0 ID=cds-WP_000816280.1;Parent=gene-AD11_RS21680;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AD11_RS21680;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 75901 76737 . - . ID=gene-AD11_RS21685;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AD11_RS21685;old_locus_tag=AD11_3741 NZ_JJLL01000151.1 Protein Homology CDS 75901 76737 . - 0 ID=cds-WP_000742143.1;Parent=gene-AD11_RS21685;Dbxref=GenBank:WP_000742143.1;Name=WP_000742143.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AD11_RS21685;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742143.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 76844 78130 . - . ID=gene-AD11_RS21690;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AD11_RS21690;old_locus_tag=AD11_3742 NZ_JJLL01000151.1 Protein Homology CDS 76844 78130 . - 0 ID=cds-WP_000343215.1;Parent=gene-AD11_RS21690;Dbxref=GenBank:WP_000343215.1;Name=WP_000343215.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417847.1;locus_tag=AD11_RS21690;product=cell division protein DamX;protein_id=WP_000343215.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 78222 79310 . - . ID=gene-AD11_RS21695;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AD11_RS21695;old_locus_tag=AD11_3743 NZ_JJLL01000151.1 Protein Homology CDS 78222 79310 . - 0 ID=cds-WP_000439848.1;Parent=gene-AD11_RS21695;Dbxref=GenBank:WP_000439848.1;Name=WP_000439848.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=AD11_RS21695;product=3-dehydroquinate synthase;protein_id=WP_000439848.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 79367 79888 . - . ID=gene-AD11_RS21700;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AD11_RS21700;old_locus_tag=AD11_3744 NZ_JJLL01000151.1 Protein Homology CDS 79367 79888 . - 0 ID=cds-WP_000818618.1;Parent=gene-AD11_RS21700;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AD11_RS21700;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 80289 81527 . - . ID=gene-AD11_RS21705;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AD11_RS21705;old_locus_tag=AD11_3745 NZ_JJLL01000151.1 Protein Homology CDS 80289 81527 . - 0 ID=cds-WP_000815987.1;Parent=gene-AD11_RS21705;Dbxref=GenBank:WP_000815987.1;Name=WP_000815987.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AD11_RS21705;product=DNA uptake porin HofQ;protein_id=WP_000815987.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 81439 81843 . - . ID=gene-AD11_RS21710;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AD11_RS21710;old_locus_tag=AD11_3746 NZ_JJLL01000151.1 Protein Homology CDS 81439 81843 . - 0 ID=cds-WP_001264141.1;Parent=gene-AD11_RS21710;Dbxref=GenBank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AD11_RS21710;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 81833 82273 . - . ID=gene-AD11_RS21715;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AD11_RS21715;old_locus_tag=AD11_3747 NZ_JJLL01000151.1 Protein Homology CDS 81833 82273 . - 0 ID=cds-WP_001055760.1;Parent=gene-AD11_RS21715;Dbxref=GenBank:WP_001055760.1;Name=WP_001055760.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AD11_RS21715;product=DNA utilization protein HofO;protein_id=WP_001055760.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 82257 82796 . - . ID=gene-AD11_RS21720;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AD11_RS21720;old_locus_tag=AD11_3748 NZ_JJLL01000151.1 Protein Homology CDS 82257 82796 . - 0 ID=cds-WP_001069315.1;Parent=gene-AD11_RS21720;Dbxref=GenBank:WP_001069315.1;Name=WP_001069315.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417853.1;locus_tag=AD11_RS21720;product=DNA utilization protein HofN;protein_id=WP_001069315.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 82796 83575 . - . ID=gene-AD11_RS21725;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AD11_RS21725;old_locus_tag=AD11_3749 NZ_JJLL01000151.1 Protein Homology CDS 82796 83575 . - 0 ID=cds-WP_001295166.1;Parent=gene-AD11_RS21725;Dbxref=GenBank:WP_001295166.1;Name=WP_001295166.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AD11_RS21725;product=DNA utilization protein HofM;protein_id=WP_001295166.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 83695 86247 . + . ID=gene-AD11_RS21730;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AD11_RS21730;old_locus_tag=AD11_3750 NZ_JJLL01000151.1 Protein Homology CDS 83695 86247 . + 0 ID=cds-WP_021559555.1;Parent=gene-AD11_RS21730;Dbxref=GenBank:WP_021559555.1;Name=WP_021559555.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=AD11_RS21730;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_021559555.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 86415 86975 . - . ID=gene-AD11_RS21735;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AD11_RS21735;old_locus_tag=AD11_3751 NZ_JJLL01000151.1 Protein Homology CDS 86415 86975 . - 0 ID=cds-WP_000045744.1;Parent=gene-AD11_RS21735;Dbxref=GenBank:WP_000045744.1;Name=WP_000045744.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AD11_RS21735;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 87295 89430 . + . ID=gene-AD11_RS21740;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AD11_RS21740;old_locus_tag=AD11_3753 NZ_JJLL01000151.1 Protein Homology CDS 87295 89430 . + 0 ID=cds-WP_033866524.1;Parent=gene-AD11_RS21740;Dbxref=GenBank:WP_033866524.1;Name=WP_033866524.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AD11_RS21740;product=intracellular growth attenuator protein IgaA;protein_id=WP_033866524.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 89495 90163 . + . ID=gene-AD11_RS21745;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AD11_RS21745;old_locus_tag=AD11_3754 NZ_JJLL01000151.1 Protein Homology CDS 89495 90163 . + 0 ID=cds-WP_001300440.1;Parent=gene-AD11_RS21745;Dbxref=GenBank:WP_001300440.1;Name=WP_001300440.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AD11_RS21745;product=GMP/IMP nucleotidase;protein_id=WP_001300440.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 90174 90575 . + . ID=gene-AD11_RS21750;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AD11_RS21750;old_locus_tag=AD11_3755 NZ_JJLL01000151.1 Protein Homology CDS 90174 90575 . + 0 ID=cds-WP_000660483.1;Parent=gene-AD11_RS21750;Dbxref=GenBank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=AD11_RS21750;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 90600 91478 . + . ID=gene-AD11_RS21755;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AD11_RS21755;old_locus_tag=AD11_3756 NZ_JJLL01000151.1 Protein Homology CDS 90600 91478 . + 0 ID=cds-WP_001135574.1;Parent=gene-AD11_RS21755;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AD11_RS21755;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 91541 93265 . - . ID=gene-AD11_RS21760;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AD11_RS21760;old_locus_tag=AD11_3757 NZ_JJLL01000151.1 Protein Homology CDS 91541 93265 . - 0 ID=cds-WP_000370879.1;Parent=gene-AD11_RS21760;Dbxref=GenBank:WP_000370879.1;Name=WP_000370879.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417861.1;locus_tag=AD11_RS21760;product=DUF4153 domain-containing protein;protein_id=WP_000370879.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 93644 95266 . + . ID=gene-AD11_RS21770;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AD11_RS21770;old_locus_tag=AD11_3760 NZ_JJLL01000151.1 Protein Homology CDS 93644 95266 . + 0 ID=cds-WP_001265681.1;Parent=gene-AD11_RS21770;Dbxref=GenBank:WP_001265681.1;Name=WP_001265681.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AD11_RS21770;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265681.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 95342 96694 . - . ID=gene-AD11_RS21775;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AD11_RS21775;old_locus_tag=AD11_3761 NZ_JJLL01000151.1 Protein Homology CDS 95342 96694 . - 0 ID=cds-WP_001253696.1;Parent=gene-AD11_RS21775;Dbxref=GenBank:WP_001253696.1;Name=WP_001253696.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AD11_RS21775;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 96691 97410 . - . ID=gene-AD11_RS21780;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AD11_RS21780;old_locus_tag=AD11_3762 NZ_JJLL01000151.1 Protein Homology CDS 96691 97410 . - 0 ID=cds-WP_001157751.1;Parent=gene-AD11_RS21780;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AD11_RS21780;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 97638 98114 . + . ID=gene-AD11_RS21785;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AD11_RS21785;old_locus_tag=AD11_3763 NZ_JJLL01000151.1 Protein Homology CDS 97638 98114 . + 0 ID=cds-WP_000856737.1;Parent=gene-AD11_RS21785;Dbxref=GenBank:WP_000856737.1;Name=WP_000856737.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026216.2;locus_tag=AD11_RS21785;product=transcription elongation factor GreB;protein_id=WP_000856737.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 98211 100532 . + . ID=gene-AD11_RS21790;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AD11_RS21790;old_locus_tag=AD11_3764 NZ_JJLL01000151.1 Protein Homology CDS 98211 100532 . + 0 ID=cds-WP_000980706.1;Parent=gene-AD11_RS21790;Dbxref=GenBank:WP_000980706.1;Name=WP_000980706.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AD11_RS21790;product=Tex family protein;protein_id=WP_000980706.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 100970 101197 . + . ID=gene-AD11_RS21795;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AD11_RS21795;old_locus_tag=AD11_3765 NZ_JJLL01000151.1 Protein Homology CDS 100970 101197 . + 0 ID=cds-WP_001200455.1;Parent=gene-AD11_RS21795;Dbxref=GenBank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AD11_RS21795;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 101214 103535 . + . ID=gene-AD11_RS21800;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AD11_RS21800;old_locus_tag=AD11_3766 NZ_JJLL01000151.1 Protein Homology CDS 101214 103535 . + 0 ID=cds-WP_000737007.1;Parent=gene-AD11_RS21800;Dbxref=GenBank:WP_000737007.1;Name=WP_000737007.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417868.1;locus_tag=AD11_RS21800;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737007.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 103535 103771 . + . ID=gene-AD11_RS21805;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AD11_RS21805;old_locus_tag=AD11_3767 NZ_JJLL01000151.1 Protein Homology CDS 103535 103771 . + 0 ID=cds-WP_000157586.1;Parent=gene-AD11_RS21805;Dbxref=GenBank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AD11_RS21805;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 103974 104852 . + . ID=gene-AD11_RS21810;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AD11_RS21810;old_locus_tag=AD11_3768 NZ_JJLL01000151.1 Protein Homology CDS 103974 104852 . + 0 ID=cds-WP_000039063.1;Parent=gene-AD11_RS21810;Dbxref=GenBank:WP_000039063.1;Name=WP_000039063.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AD11_RS21810;product=recombination-promoting nuclease RpnA;protein_id=WP_000039063.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 104881 105651 . - . ID=gene-AD11_RS21815;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AD11_RS21815;old_locus_tag=AD11_3769 NZ_JJLL01000151.1 Protein Homology CDS 104881 105651 . - 0 ID=cds-WP_001060076.1;Parent=gene-AD11_RS21815;Dbxref=GenBank:WP_001060076.1;Name=WP_001060076.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AD11_RS21815;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060076.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 105689 106372 . + . ID=gene-AD11_RS21820;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AD11_RS21820;old_locus_tag=AD11_3771 NZ_JJLL01000151.1 Protein Homology CDS 105689 106372 . + 0 ID=cds-WP_001308099.1;Parent=gene-AD11_RS21820;Dbxref=GenBank:WP_001308099.1;Name=WP_001308099.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AD11_RS21820;product=DNA utilization protein GntX;protein_id=WP_001308099.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 106431 107006 . + . ID=gene-AD11_RS21825;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AD11_RS21825;old_locus_tag=AD11_3772 NZ_JJLL01000151.1 Protein Homology CDS 106431 107006 . + 0 ID=cds-WP_000619389.1;Parent=gene-AD11_RS21825;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AD11_RS21825;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 107366 108682 . + . ID=gene-AD11_RS21830;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AD11_RS21830;old_locus_tag=AD11_3773 NZ_JJLL01000151.1 Protein Homology CDS 107366 108682 . + 0 ID=cds-WP_001131758.1;Parent=gene-AD11_RS21830;Dbxref=GenBank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AD11_RS21830;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 108793 110877 . - . ID=gene-AD11_RS21835;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AD11_RS21835;old_locus_tag=AD11_3774 NZ_JJLL01000151.1 Protein Homology CDS 108793 110877 . - 0 ID=cds-WP_033865787.1;Parent=gene-AD11_RS21835;Dbxref=GenBank:WP_033865787.1;Name=WP_033865787.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AD11_RS21835;product=4-alpha-glucanotransferase;protein_id=WP_033865787.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 110887 113280 . - . ID=gene-AD11_RS21840;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AD11_RS21840;old_locus_tag=AD11_3775 NZ_JJLL01000151.1 Protein Homology CDS 110887 113280 . - 0 ID=cds-WP_001411461.1;Parent=gene-AD11_RS21840;Dbxref=GenBank:WP_001411461.1;Name=WP_001411461.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312286.1;locus_tag=AD11_RS21840;product=maltodextrin phosphorylase;protein_id=WP_001411461.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 113892 116597 . + . ID=gene-AD11_RS21845;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AD11_RS21845;old_locus_tag=AD11_3776 NZ_JJLL01000151.1 Protein Homology CDS 113892 116597 . + 0 ID=cds-WP_000906961.1;Parent=gene-AD11_RS21845;Dbxref=GenBank:WP_000906961.1;Name=WP_000906961.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417877.1;locus_tag=AD11_RS21845;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906961.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 116640 117656 . - . ID=gene-AD11_RS21850;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=AD11_RS21850;old_locus_tag=AD11_3777 NZ_JJLL01000151.1 Protein Homology CDS 116640 117656 . - 0 ID=cds-WP_001618921.1;Parent=gene-AD11_RS21850;Dbxref=GenBank:WP_001618921.1;Name=WP_001618921.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AD11_RS21850;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_001618921.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 117660 118886 . - . ID=gene-AD11_RS21855;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AD11_RS21855;old_locus_tag=AD11_3778 NZ_JJLL01000151.1 Protein Homology CDS 117660 118886 . - 0 ID=cds-WP_001105502.1;Parent=gene-AD11_RS21855;Dbxref=GenBank:WP_001105502.1;Name=WP_001105502.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AD11_RS21855;product=RNA-splicing ligase RtcB;protein_id=WP_001105502.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 119075 120673 . + . ID=gene-AD11_RS21860;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=AD11_RS21860;old_locus_tag=AD11_3779 NZ_JJLL01000151.1 Protein Homology CDS 119075 120673 . + 0 ID=cds-WP_001618923.1;Parent=gene-AD11_RS21860;Dbxref=GenBank:WP_001618923.1;Name=WP_001618923.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AD11_RS21860;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001618923.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 120655 121413 . - . ID=gene-AD11_RS21865;Name=AD11_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS21865;old_locus_tag=AD11_3780 NZ_JJLL01000151.1 Protein Homology CDS 120655 121413 . - 0 ID=cds-WP_000815099.1;Parent=gene-AD11_RS21865;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AD11_RS21865;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 121430 122260 . - . ID=gene-AD11_RS21870;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AD11_RS21870;old_locus_tag=AD11_3781 NZ_JJLL01000151.1 Protein Homology CDS 121430 122260 . - 0 ID=cds-WP_000928723.1;Parent=gene-AD11_RS21870;Dbxref=GenBank:WP_000928723.1;Name=WP_000928723.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AD11_RS21870;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928723.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 122305 122631 . - . ID=gene-AD11_RS21875;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AD11_RS21875;old_locus_tag=AD11_3782 NZ_JJLL01000151.1 Protein Homology CDS 122305 122631 . - 0 ID=cds-WP_000371928.1;Parent=gene-AD11_RS21875;Dbxref=GenBank:WP_000371928.1;Name=WP_000371928.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AD11_RS21875;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371928.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 122821 124326 . + . ID=gene-AD11_RS21880;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AD11_RS21880;old_locus_tag=AD11_3783 NZ_JJLL01000151.1 Protein Homology CDS 122821 124326 . + 0 ID=cds-WP_001401234.1;Parent=gene-AD11_RS21880;Dbxref=GenBank:WP_001401234.1;Name=WP_001401234.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312296.1;locus_tag=AD11_RS21880;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_001401234.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 124378 124983 . - . ID=gene-AD11_RS21885;Name=AD11_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS21885;old_locus_tag=AD11_3784 NZ_JJLL01000151.1 Protein Homology CDS 124378 124983 . - 0 ID=cds-WP_000589359.1;Parent=gene-AD11_RS21885;Dbxref=GenBank:WP_000589359.1;Name=WP_000589359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000589351.1;locus_tag=AD11_RS21885;product=hypothetical protein;protein_id=WP_000589359.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 124986 125753 . - . ID=gene-AD11_RS21890;Name=AD11_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS21890;old_locus_tag=AD11_3785 NZ_JJLL01000151.1 Protein Homology CDS 124986 125753 . - 0 ID=cds-WP_001183144.1;Parent=gene-AD11_RS21890;Dbxref=GenBank:WP_001183144.1;Name=WP_001183144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182130.1;locus_tag=AD11_RS21890;product=hypothetical protein;protein_id=WP_001183144.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 125756 126466 . - . ID=gene-AD11_RS21895;Name=AD11_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS21895;old_locus_tag=AD11_3786 NZ_JJLL01000151.1 Protein Homology CDS 125756 126466 . - 0 ID=cds-WP_000424548.1;Parent=gene-AD11_RS21895;Dbxref=GenBank:WP_000424548.1;Name=WP_000424548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424214.1;locus_tag=AD11_RS21895;product=hypothetical protein;protein_id=WP_000424548.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 126482 127990 . - . ID=gene-AD11_RS21900;Name=AD11_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS21900;old_locus_tag=AD11_3787 NZ_JJLL01000151.1 Protein Homology CDS 126482 127990 . - 0 ID=cds-WP_148725004.1;Parent=gene-AD11_RS21900;Dbxref=GenBank:WP_148725004.1;Name=WP_148725004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001443257.1;locus_tag=AD11_RS21900;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_148725004.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 128115 130562 . - . ID=gene-AD11_RS21905;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AD11_RS21905;old_locus_tag=AD11_3788 NZ_JJLL01000151.1 Protein Homology CDS 128115 130562 . - 0 ID=cds-WP_000993449.1;Parent=gene-AD11_RS21905;Dbxref=GenBank:WP_000993449.1;Name=WP_000993449.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AD11_RS21905;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 130581 132014 . - . ID=gene-AD11_RS21910;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AD11_RS21910;old_locus_tag=AD11_3789 NZ_JJLL01000151.1 Protein Homology CDS 130581 132014 . - 0 ID=cds-WP_001197646.1;Parent=gene-AD11_RS21910;Dbxref=GenBank:WP_001197646.1;Name=WP_001197646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AD11_RS21910;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 132014 133309 . - . ID=gene-AD11_RS21915;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AD11_RS21915;old_locus_tag=AD11_3790 NZ_JJLL01000151.1 Protein Homology CDS 132014 133309 . - 0 ID=cds-WP_000253975.1;Parent=gene-AD11_RS21915;Dbxref=GenBank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AD11_RS21915;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 133327 135300 . - . ID=gene-AD11_RS21920;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AD11_RS21920;old_locus_tag=AD11_3791 NZ_JJLL01000151.1 Protein Homology CDS 133327 135300 . - 0 ID=cds-WP_000192523.1;Parent=gene-AD11_RS21920;Dbxref=GenBank:WP_000192523.1;Name=WP_000192523.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AD11_RS21920;product=glycogen debranching protein GlgX;protein_id=WP_000192523.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 135297 137483 . - . ID=gene-AD11_RS21925;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AD11_RS21925;old_locus_tag=AD11_3792 NZ_JJLL01000151.1 Protein Homology CDS 135297 137483 . - 0 ID=cds-WP_001283723.1;Parent=gene-AD11_RS21925;Dbxref=GenBank:WP_001283723.1;Name=WP_001283723.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AD11_RS21925;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283723.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 137756 138859 . - . ID=gene-AD11_RS21930;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AD11_RS21930;old_locus_tag=AD11_3793 NZ_JJLL01000151.1 Protein Homology CDS 137756 138859 . - 0 ID=cds-WP_000799956.1;Parent=gene-AD11_RS21930;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AD11_RS21930;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 139052 139645 . + . ID=gene-AD11_RS21935;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AD11_RS21935;old_locus_tag=AD11_3794 NZ_JJLL01000151.1 Protein Homology CDS 139052 139645 . + 0 ID=cds-WP_001002544.1;Parent=gene-AD11_RS21935;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AD11_RS21935;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 139702 141042 . - . ID=gene-AD11_RS21940;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AD11_RS21940;old_locus_tag=AD11_3795 NZ_JJLL01000151.1 Protein Homology CDS 139702 141042 . - 0 ID=cds-WP_000210111.1;Parent=gene-AD11_RS21940;Dbxref=GenBank:WP_000210111.1;Name=WP_000210111.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AD11_RS21940;product=gluconate transporter;protein_id=WP_000210111.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 141046 141573 . - . ID=gene-AD11_RS21945;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AD11_RS21945;old_locus_tag=AD11_3796 NZ_JJLL01000151.1 Protein Homology CDS 141046 141573 . - 0 ID=cds-WP_000108330.1;Parent=gene-AD11_RS21945;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AD11_RS21945;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 141712 142707 . - . ID=gene-AD11_RS21950;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AD11_RS21950;old_locus_tag=AD11_3797 NZ_JJLL01000151.1 Protein Homology CDS 141712 142707 . - 0 ID=cds-WP_000730263.1;Parent=gene-AD11_RS21950;Dbxref=GenBank:WP_000730263.1;Name=WP_000730263.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AD11_RS21950;product=gluconate operon transcriptional repressor GntR;protein_id=WP_000730263.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 142931 143626 . - . ID=gene-AD11_RS21955;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AD11_RS21955;old_locus_tag=AD11_3798 NZ_JJLL01000151.1 Protein Homology CDS 142931 143626 . - 0 ID=cds-WP_000639811.1;Parent=gene-AD11_RS21955;Dbxref=GenBank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AD11_RS21955;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 143749 144786 . - . ID=gene-AD11_RS21960;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AD11_RS21960;old_locus_tag=AD11_3799 NZ_JJLL01000151.1 Protein Homology CDS 143749 144786 . - 0 ID=cds-WP_001618924.1;Parent=gene-AD11_RS21960;Dbxref=GenBank:WP_001618924.1;Name=WP_001618924.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AD11_RS21960;product=oxidoreductase;protein_id=WP_001618924.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 145119 145607 . + . ID=gene-AD11_RS21965;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AD11_RS21965 NZ_JJLL01000151.1 Protein Homology CDS 145119 145607 . + 0 ID=cds-WP_001295206.1;Parent=gene-AD11_RS21965;Dbxref=GenBank:WP_001295206.1;Name=WP_001295206.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417898.1;locus_tag=AD11_RS21965;product=N-acetyltransferase;protein_id=WP_001295206.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 145844 147022 . + . ID=gene-AD11_RS21970;Name=tssD;gbkey=Gene;gene=tssD;gene_biotype=protein_coding;locus_tag=AD11_RS21970;old_locus_tag=AD11_3801 NZ_JJLL01000151.1 Protein Homology CDS 145844 147022 . + 0 ID=cds-WP_000065894.1;Parent=gene-AD11_RS21970;Dbxref=GenBank:WP_000065894.1;Name=WP_000065894.1;gbkey=CDS;gene=tssD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417899.1;locus_tag=AD11_RS21970;product=Hcp1 family type VI secretion system effector;protein_id=WP_000065894.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 147019 147513 . + . ID=gene-AD11_RS21975;Name=yrhA;gbkey=Gene;gene=yrhA;gene_biotype=protein_coding;locus_tag=AD11_RS21975;old_locus_tag=AD11_3802 NZ_JJLL01000151.1 Protein Homology CDS 147019 147513 . + 0 ID=cds-WP_000988496.1;Parent=gene-AD11_RS21975;Dbxref=GenBank:WP_000988496.1;Name=WP_000988496.1;gbkey=CDS;gene=yrhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000988499.1;locus_tag=AD11_RS21975;product=protein YrhA;protein_id=WP_000988496.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 147608 147763 . + . ID=gene-AD11_RS31770;Name=yrhD;gbkey=Gene;gene=yrhD;gene_biotype=protein_coding;locus_tag=AD11_RS31770 NZ_JJLL01000151.1 Protein Homology CDS 147608 147763 . + 0 ID=cds-WP_001307436.1;Parent=gene-AD11_RS31770;Dbxref=GenBank:WP_001307436.1;Name=WP_001307436.1;gbkey=CDS;gene=yrhD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518820.1;locus_tag=AD11_RS31770;product=protein YrhD;protein_id=WP_001307436.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 147963 148247 . + . ID=gene-AD11_RS21980;Name=yrhB;gbkey=Gene;gene=yrhB;gene_biotype=protein_coding;locus_tag=AD11_RS21980;old_locus_tag=AD11_3803 NZ_JJLL01000151.1 Protein Homology CDS 147963 148247 . + 0 ID=cds-WP_000634159.1;Parent=gene-AD11_RS21980;Dbxref=GenBank:WP_000634159.1;Name=WP_000634159.1;gbkey=CDS;gene=yrhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AD11_RS21980;product=YrhB family protein;protein_id=WP_000634159.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 148285 150027 . - . ID=gene-AD11_RS21985;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AD11_RS21985;old_locus_tag=AD11_3804 NZ_JJLL01000151.1 Protein Homology CDS 148285 150027 . - 0 ID=cds-WP_001645877.1;Parent=gene-AD11_RS21985;Dbxref=GenBank:WP_001645877.1;Name=WP_001645877.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486198.1;locus_tag=AD11_RS21985;product=gamma-glutamyltransferase;protein_id=WP_001645877.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 150147 150587 . + . ID=gene-AD11_RS21990;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AD11_RS21990;old_locus_tag=AD11_3805 NZ_JJLL01000151.1 Protein Homology CDS 150147 150587 . + 0 ID=cds-WP_000825996.1;Parent=gene-AD11_RS21990;Dbxref=GenBank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AD11_RS21990;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 150574 151317 . - . ID=gene-AD11_RS21995;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AD11_RS21995;old_locus_tag=AD11_3806 NZ_JJLL01000151.1 Protein Homology CDS 150574 151317 . - 0 ID=cds-WP_000073599.1;Parent=gene-AD11_RS21995;Dbxref=GenBank:WP_000073599.1;Name=WP_000073599.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312322.1;locus_tag=AD11_RS21995;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073599.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 151314 152384 . - . ID=gene-AD11_RS22000;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AD11_RS22000;old_locus_tag=AD11_3807 NZ_JJLL01000151.1 Protein Homology CDS 151314 152384 . - 0 ID=cds-WP_033865790.1;Parent=gene-AD11_RS22000;Dbxref=GenBank:WP_033865790.1;Name=WP_033865790.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AD11_RS22000;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_033865790.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 152386 153231 . - . ID=gene-AD11_RS22005;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AD11_RS22005;old_locus_tag=AD11_3808 NZ_JJLL01000151.1 Protein Homology CDS 152386 153231 . - 0 ID=cds-WP_000572176.1;Parent=gene-AD11_RS22005;Dbxref=GenBank:WP_000572176.1;Name=WP_000572176.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AD11_RS22005;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 153228 154115 . - . ID=gene-AD11_RS22010;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AD11_RS22010;old_locus_tag=AD11_3809 NZ_JJLL01000151.1 Protein Homology CDS 153228 154115 . - 0 ID=cds-WP_000099289.1;Parent=gene-AD11_RS22010;Dbxref=GenBank:WP_000099289.1;Name=WP_000099289.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AD11_RS22010;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099289.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 154213 155529 . - . ID=gene-AD11_RS22015;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AD11_RS22015;old_locus_tag=AD11_3810 NZ_JJLL01000151.1 Protein Homology CDS 154213 155529 . - 0 ID=cds-WP_033865791.1;Parent=gene-AD11_RS22015;Dbxref=GenBank:WP_033865791.1;Name=WP_033865791.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AD11_RS22015;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_033865791.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 155926 156639 . - . ID=gene-AD11_RS22025;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AD11_RS22025;old_locus_tag=AD11_3812 NZ_JJLL01000151.1 Protein Homology CDS 155926 156639 . - 0 ID=cds-WP_000416900.1;Parent=gene-AD11_RS22025;Dbxref=GenBank:WP_000416900.1;Name=WP_000416900.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=AD11_RS22025;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416900.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 156641 157408 . - . ID=gene-AD11_RS22030;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AD11_RS22030;old_locus_tag=AD11_3813 NZ_JJLL01000151.1 Protein Homology CDS 156641 157408 . - 0 ID=cds-WP_000082110.1;Parent=gene-AD11_RS22030;Dbxref=GenBank:WP_000082110.1;Name=WP_000082110.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AD11_RS22030;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082110.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 157405 158682 . - . ID=gene-AD11_RS22035;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AD11_RS22035;old_locus_tag=AD11_3814 NZ_JJLL01000151.1 Protein Homology CDS 157405 158682 . - 0 ID=cds-WP_000803782.1;Parent=gene-AD11_RS22035;Dbxref=GenBank:WP_000803782.1;Name=WP_000803782.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=AD11_RS22035;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803782.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 158679 159605 . - . ID=gene-AD11_RS22040;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AD11_RS22040;old_locus_tag=AD11_3815 NZ_JJLL01000151.1 Protein Homology CDS 158679 159605 . - 0 ID=cds-WP_001295111.1;Parent=gene-AD11_RS22040;Dbxref=GenBank:WP_001295111.1;Name=WP_001295111.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AD11_RS22040;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_001295111.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 159653 160762 . - . ID=gene-AD11_RS22045;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AD11_RS22045;old_locus_tag=AD11_3816 NZ_JJLL01000151.1 Protein Homology CDS 159653 160762 . - 0 ID=cds-WP_033865793.1;Parent=gene-AD11_RS22045;Dbxref=GenBank:WP_033865793.1;Name=WP_033865793.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AD11_RS22045;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_033865793.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 161186 161569 . + . ID=gene-AD11_RS22050;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AD11_RS22050;old_locus_tag=AD11_3818 NZ_JJLL01000151.1 Protein Homology CDS 161186 161569 . + 0 ID=cds-WP_000778792.1;Parent=gene-AD11_RS22050;Dbxref=GenBank:WP_000778792.1;Name=WP_000778792.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AD11_RS22050;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778792.1;transl_table=11 NZ_JJLL01000151.1 RefSeq pseudogene 161769 162872 . - . ID=gene-AD11_RS22060;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=pseudogene;locus_tag=AD11_RS22060;pseudo=true NZ_JJLL01000151.1 Protein Homology CDS 161769 162872 . - 0 ID=cds-AD11_RS22060;Parent=gene-AD11_RS22060;Note=internal stop;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AD11_RS22060;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;pseudo=true;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 163143 163997 . - . ID=gene-AD11_RS22065;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AD11_RS22065;old_locus_tag=AD11_3821 NZ_JJLL01000151.1 Protein Homology CDS 163143 163997 . - 0 ID=cds-WP_000130217.1;Parent=gene-AD11_RS22065;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AD11_RS22065;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 164242 165300 . - . ID=gene-AD11_RS22070;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AD11_RS22070;old_locus_tag=AD11_3822 NZ_JJLL01000151.1 Protein Homology CDS 164242 165300 . - 0 ID=cds-WP_001042003.1;Parent=gene-AD11_RS22070;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AD11_RS22070;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 165293 165961 . - . ID=gene-AD11_RS22075;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AD11_RS22075;old_locus_tag=AD11_3823 NZ_JJLL01000151.1 Protein Homology CDS 165293 165961 . - 0 ID=cds-WP_000617726.1;Parent=gene-AD11_RS22075;Dbxref=GenBank:WP_000617726.1;Name=WP_000617726.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AD11_RS22075;product=cell division ATP-binding protein FtsE;protein_id=WP_000617726.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 165964 167460 . - . ID=gene-AD11_RS22080;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AD11_RS22080;old_locus_tag=AD11_3824 NZ_JJLL01000151.1 Protein Homology CDS 165964 167460 . - 0 ID=cds-WP_001040683.1;Parent=gene-AD11_RS22080;Dbxref=GenBank:WP_001040683.1;Name=WP_001040683.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AD11_RS22080;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040683.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 167610 168206 . + . ID=gene-AD11_RS22085;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AD11_RS22085;old_locus_tag=AD11_3825 NZ_JJLL01000151.1 Protein Homology CDS 167610 168206 . + 0 ID=cds-WP_000743181.1;Parent=gene-AD11_RS22085;Dbxref=GenBank:WP_000743181.1;Name=WP_000743181.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AD11_RS22085;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743181.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 168196 168465 . + . ID=gene-AD11_RS22090;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AD11_RS22090;old_locus_tag=AD11_3826 NZ_JJLL01000151.1 Protein Homology CDS 168196 168465 . + 0 ID=cds-WP_001295207.1;Parent=gene-AD11_RS22090;Dbxref=GenBank:WP_001295207.1;Name=WP_001295207.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=AD11_RS22090;product=DUF1145 family protein;protein_id=WP_001295207.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 168468 168827 . - . ID=gene-AD11_RS22095;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=AD11_RS22095;old_locus_tag=AD11_3827 NZ_JJLL01000151.1 Protein Homology CDS 168468 168827 . - 0 ID=cds-WP_000042900.1;Parent=gene-AD11_RS22095;Dbxref=GenBank:WP_000042900.1;Name=WP_000042900.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709237.1;locus_tag=AD11_RS22095;product=DUF2500 domain-containing protein;protein_id=WP_000042900.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 168968 169594 . + . ID=gene-AD11_RS22100;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=AD11_RS22100;old_locus_tag=AD11_3828 NZ_JJLL01000151.1 Protein Homology CDS 168968 169594 . + 0 ID=cds-WP_033865795.1;Parent=gene-AD11_RS22100;Dbxref=GenBank:WP_033865795.1;Name=WP_033865795.1;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AD11_RS22100;product=lysoplasmalogenase;protein_id=WP_033865795.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 169668 171866 . + . ID=gene-AD11_RS22105;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AD11_RS22105;old_locus_tag=AD11_3829 NZ_JJLL01000151.1 Protein Homology CDS 169668 171866 . + 0 ID=cds-WP_000106560.1;Parent=gene-AD11_RS22105;Dbxref=GenBank:WP_000106560.1;Name=WP_000106560.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312345.1;locus_tag=AD11_RS22105;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_000106560.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 171968 172213 . - . ID=gene-AD11_RS22110;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AD11_RS22110;old_locus_tag=AD11_3830 NZ_JJLL01000151.1 Protein Homology CDS 171968 172213 . - 0 ID=cds-WP_000130621.1;Parent=gene-AD11_RS22110;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AD11_RS22110;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 172434 173099 . + . ID=gene-AD11_RS22115;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=AD11_RS22115;old_locus_tag=AD11_3831 NZ_JJLL01000151.1 Protein Homology CDS 172434 173099 . + 0 ID=cds-WP_001100469.1;Parent=gene-AD11_RS22115;Dbxref=GenBank:WP_001100469.1;Name=WP_001100469.1;Ontology_term=GO:1990397;gbkey=CDS;gene=yhhQ;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417928.1;locus_tag=AD11_RS22115;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100469.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 173172 173729 . + . ID=gene-AD11_RS22120;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AD11_RS22120;old_locus_tag=AD11_3832 NZ_JJLL01000151.1 Protein Homology CDS 173172 173729 . + 0 ID=cds-WP_001245295.1;Parent=gene-AD11_RS22120;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AD11_RS22120;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 173733 174950 . - . ID=gene-AD11_RS22125;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;locus_tag=AD11_RS22125;old_locus_tag=AD11_3833 NZ_JJLL01000151.1 Protein Homology CDS 173733 174950 . - 0 ID=cds-WP_001300943.1;Parent=gene-AD11_RS22125;Dbxref=GenBank:WP_001300943.1;Name=WP_001300943.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yhhS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AD11_RS22125;product=MFS transporter;protein_id=WP_001300943.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 175082 176131 . + . ID=gene-AD11_RS22130;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=AD11_RS22130;old_locus_tag=AD11_3834 NZ_JJLL01000151.1 Protein Homology CDS 175082 176131 . + 0 ID=cds-WP_001297848.1;Parent=gene-AD11_RS22130;Dbxref=GenBank:WP_001297848.1;Name=WP_001297848.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AD11_RS22130;product=AI-2E family transporter;protein_id=WP_001297848.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 176186 176773 . + . ID=gene-AD11_RS22135;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AD11_RS22135;old_locus_tag=AD11_3835 NZ_JJLL01000151.1 Protein Homology CDS 176186 176773 . + 0 ID=cds-WP_000285791.1;Parent=gene-AD11_RS22135;Dbxref=GenBank:WP_000285791.1;Name=WP_000285791.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312369.1;locus_tag=AD11_RS22135;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285791.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 176884 178458 . + . ID=gene-AD11_RS22140;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AD11_RS22140;old_locus_tag=AD11_3836 NZ_JJLL01000151.1 Protein Homology CDS 176884 178458 . + 0 ID=cds-WP_000953353.1;Parent=gene-AD11_RS22140;Dbxref=GenBank:WP_000953353.1;Name=WP_000953353.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417933.1;locus_tag=AD11_RS22140;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953353.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 178458 179402 . + . ID=gene-AD11_RS22145;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AD11_RS22145;old_locus_tag=AD11_3837 NZ_JJLL01000151.1 Protein Homology CDS 178458 179402 . + 0 ID=cds-WP_033865796.1;Parent=gene-AD11_RS22145;Dbxref=GenBank:WP_033865796.1;Name=WP_033865796.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AD11_RS22145;product=nickel ABC transporter permease subunit NikB;protein_id=WP_033865796.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 179399 180232 . + . ID=gene-AD11_RS22150;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AD11_RS22150;old_locus_tag=AD11_3838 NZ_JJLL01000151.1 Protein Homology CDS 179399 180232 . + 0 ID=cds-WP_001008963.1;Parent=gene-AD11_RS22150;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AD11_RS22150;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 180232 180996 . + . ID=gene-AD11_RS22155;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AD11_RS22155;old_locus_tag=AD11_3839 NZ_JJLL01000151.1 Protein Homology CDS 180232 180996 . + 0 ID=cds-WP_001136229.1;Parent=gene-AD11_RS22155;Dbxref=GenBank:WP_001136229.1;Name=WP_001136229.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AD11_RS22155;product=nickel import ATP-binding protein NikD;protein_id=WP_001136229.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 180993 181799 . + . ID=gene-AD11_RS22160;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AD11_RS22160;old_locus_tag=AD11_3840 NZ_JJLL01000151.1 Protein Homology CDS 180993 181799 . + 0 ID=cds-WP_000173631.1;Parent=gene-AD11_RS22160;Dbxref=GenBank:WP_000173631.1;Name=WP_000173631.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AD11_RS22160;product=nickel import ATP-binding protein NikE;protein_id=WP_000173631.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 181805 182206 . + . ID=gene-AD11_RS22165;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AD11_RS22165;old_locus_tag=AD11_3841 NZ_JJLL01000151.1 Protein Homology CDS 181805 182206 . + 0 ID=cds-WP_001190062.1;Parent=gene-AD11_RS22165;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AD11_RS22165;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JJLL01000151.1 RefSeq gene 182409 182660 . + . ID=gene-AD11_RS22170;Name=AD11_RS22170;end_range=182660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS22170;old_locus_tag=AD11_3842;partial=true NZ_JJLL01000151.1 Protein Homology CDS 182409 182660 . + 0 ID=cds-WP_027661981.1-2;Parent=gene-AD11_RS22170;Dbxref=GenBank:WP_027661981.1;Name=WP_027661981.1;end_range=182660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD11_RS22170;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_027661981.1;transl_table=11 ##sequence-region NZ_JJLL01000152.1 1 1780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000152.1 RefSeq region 1 1780 . + . ID=NZ_JJLL01000152.1:1..1780;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000152.1 RefSeq pseudogene 1 1780 . + . ID=gene-AD11_RS22175;Name=rhsC;end_range=1780,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AD11_RS22175;old_locus_tag=AD11_3843;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000152.1 Protein Homology CDS 1 1780 . + 1 ID=cds-AD11_RS22175;Parent=gene-AD11_RS22175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1780,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312891.1;locus_tag=AD11_RS22175;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLL01000153.1 1 24881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000153.1 RefSeq region 1 24881 . + . ID=NZ_JJLL01000153.1:1..24881;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000153.1 RefSeq pseudogene 13 1149 . + . ID=gene-AD11_RS22180;Name=yhhI;gbkey=Gene;gene=yhhI;gene_biotype=pseudogene;locus_tag=AD11_RS22180;old_locus_tag=AD11_3844;pseudo=true NZ_JJLL01000153.1 Protein Homology CDS 13 1149 . + 0 ID=cds-AD11_RS22180;Parent=gene-AD11_RS22180;Note=internal stop;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=yhhI;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AD11_RS22180;product=ISAs1-like element ISEc1 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 1314 2438 . - . ID=gene-AD11_RS22185;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AD11_RS22185;old_locus_tag=AD11_3845 NZ_JJLL01000153.1 Protein Homology CDS 1314 2438 . - 0 ID=cds-WP_001216257.1;Parent=gene-AD11_RS22185;Dbxref=GenBank:WP_001216257.1;Name=WP_001216257.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AD11_RS22185;product=ABC transporter permease;protein_id=WP_001216257.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 2438 5173 . - . ID=gene-AD11_RS22190;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AD11_RS22190;old_locus_tag=AD11_3846 NZ_JJLL01000153.1 Protein Homology CDS 2438 5173 . - 0 ID=cds-WP_000149156.1;Parent=gene-AD11_RS22190;Dbxref=GenBank:WP_000149156.1;Name=WP_000149156.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026225.1;locus_tag=AD11_RS22190;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_000149156.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 5170 6237 . - . ID=gene-AD11_RS22195;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AD11_RS22195;old_locus_tag=AD11_3847 NZ_JJLL01000153.1 Protein Homology CDS 5170 6237 . - 0 ID=cds-WP_000361491.1;Parent=gene-AD11_RS22195;Dbxref=GenBank:WP_000361491.1;Name=WP_000361491.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AD11_RS22195;product=HlyD family secretion protein;protein_id=WP_000361491.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 6300 6413 . - . ID=gene-AD11_RS32725;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AD11_RS32725;old_locus_tag=AD11_3848 NZ_JJLL01000153.1 Protein Homology CDS 6300 6413 . - 0 ID=cds-WP_001296785.1;Parent=gene-AD11_RS32725;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AD11_RS32725;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 6603 8225 . - . ID=gene-AD11_RS22200;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=protein_coding;locus_tag=AD11_RS22200;old_locus_tag=AD11_3849 NZ_JJLL01000153.1 Protein Homology CDS 6603 8225 . - 0 ID=cds-WP_033865804.1;Parent=gene-AD11_RS22200;Dbxref=GenBank:WP_033865804.1;Name=WP_033865804.1;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AD11_RS22200;product=DUF4049 domain-containing protein;protein_id=WP_033865804.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 8487 10094 . - . ID=gene-AD11_RS22205;Name=AD11_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS22205;old_locus_tag=AD11_3850 NZ_JJLL01000153.1 Protein Homology CDS 8487 10094 . - 0 ID=cds-WP_033865805.1;Parent=gene-AD11_RS22205;Dbxref=GenBank:WP_033865805.1;Name=WP_033865805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248132.1;locus_tag=AD11_RS22205;product=YhiJ/YhiL family protein;protein_id=WP_033865805.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 10477 11529 . + . ID=gene-AD11_RS22220;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AD11_RS22220;old_locus_tag=AD11_3853 NZ_JJLL01000153.1 Protein Homology CDS 10477 11529 . + 0 ID=cds-WP_001028905.1;Parent=gene-AD11_RS22220;Dbxref=GenBank:WP_001028905.1;Name=WP_001028905.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AD11_RS22220;product=DUF2776 domain-containing protein;protein_id=WP_001028905.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 11844 13046 . - . ID=gene-AD11_RS22225;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AD11_RS22225;old_locus_tag=AD11_3854 NZ_JJLL01000153.1 Protein Homology CDS 11844 13046 . - 0 ID=cds-WP_000439170.1;Parent=gene-AD11_RS22225;Dbxref=GenBank:WP_000439170.1;Name=WP_000439170.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AD11_RS22225;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439170.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 13278 14777 . + . ID=gene-AD11_RS22230;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AD11_RS22230;old_locus_tag=AD11_3855 NZ_JJLL01000153.1 Protein Homology CDS 13278 14777 . + 0 ID=cds-WP_000902780.1;Parent=gene-AD11_RS22230;Dbxref=GenBank:WP_000902780.1;Name=WP_000902780.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AD11_RS22230;product=inorganic phosphate transporter PitA;protein_id=WP_000902780.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 15021 15356 . - . ID=gene-AD11_RS22235;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AD11_RS22235;old_locus_tag=AD11_3857 NZ_JJLL01000153.1 Protein Homology CDS 15021 15356 . - 0 ID=cds-WP_000626187.1;Parent=gene-AD11_RS22235;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AD11_RS22235;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 15747 16181 . + . ID=gene-AD11_RS22240;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AD11_RS22240;old_locus_tag=AD11_3858 NZ_JJLL01000153.1 Protein Homology CDS 15747 16181 . + 0 ID=cds-WP_000323571.1;Parent=gene-AD11_RS22240;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AD11_RS22240;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 16248 16301 . - . ID=gene-AD11_RS32730;Name=AD11_RS32730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32730 NZ_JJLL01000153.1 Protein Homology CDS 16248 16301 . - 0 ID=cds-WP_223200729.1;Parent=gene-AD11_RS32730;Dbxref=GenBank:WP_223200729.1;Name=WP_223200729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051204.1;locus_tag=AD11_RS32730;product=hypothetical protein;protein_id=WP_223200729.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 16279 16332 . - . ID=gene-AD11_RS32735;Name=AD11_RS32735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32735 NZ_JJLL01000153.1 Protein Homology CDS 16279 16332 . - 0 ID=cds-WP_213055029.1;Parent=gene-AD11_RS32735;Dbxref=GenBank:WP_213055029.1;Name=WP_213055029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=AD11_RS32735;product=hypothetical protein;protein_id=WP_213055029.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 16498 17967 . + . ID=gene-AD11_RS22245;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AD11_RS22245;old_locus_tag=AD11_3859 NZ_JJLL01000153.1 Protein Homology CDS 16498 17967 . + 0 ID=cds-WP_001098652.1;Parent=gene-AD11_RS22245;Dbxref=GenBank:WP_001098652.1;Name=WP_001098652.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AD11_RS22245;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098652.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 18016 18768 . - . ID=gene-AD11_RS22250;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AD11_RS22250;old_locus_tag=AD11_3860 NZ_JJLL01000153.1 Protein Homology CDS 18016 18768 . - 0 ID=cds-WP_000686620.1;Parent=gene-AD11_RS22250;Dbxref=GenBank:WP_000686620.1;Name=WP_000686620.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=AD11_RS22250;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686620.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 18776 20818 . - . ID=gene-AD11_RS22255;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AD11_RS22255;old_locus_tag=AD11_3861 NZ_JJLL01000153.1 Protein Homology CDS 18776 20818 . - 0 ID=cds-WP_001298719.1;Parent=gene-AD11_RS22255;Dbxref=GenBank:WP_001298719.1;Name=WP_001298719.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=AD11_RS22255;product=oligopeptidase A;protein_id=WP_001298719.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 21021 21863 . + . ID=gene-AD11_RS22260;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AD11_RS22260;old_locus_tag=AD11_3862 NZ_JJLL01000153.1 Protein Homology CDS 21021 21863 . + 0 ID=cds-WP_001300574.1;Parent=gene-AD11_RS22260;Dbxref=GenBank:WP_001300574.1;Name=WP_001300574.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417956.1;locus_tag=AD11_RS22260;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_001300574.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 21935 23287 . + . ID=gene-AD11_RS22265;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AD11_RS22265;old_locus_tag=AD11_3863 NZ_JJLL01000153.1 Protein Homology CDS 21935 23287 . + 0 ID=cds-WP_000160808.1;Parent=gene-AD11_RS22265;Dbxref=GenBank:WP_000160808.1;Name=WP_000160808.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AD11_RS22265;product=glutathione-disulfide reductase;protein_id=WP_000160808.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 23341 23424 . - . ID=gene-AD11_RS22270;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AD11_RS22270;old_locus_tag=AD11_3864 NZ_JJLL01000153.1 Protein Homology CDS 23341 23424 . - 0 ID=cds-WP_001295215.1-2;Parent=gene-AD11_RS22270;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AD11_RS22270;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 24395 24748 . + . ID=gene-AD11_RS22280;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AD11_RS22280;old_locus_tag=AD11_3866 NZ_JJLL01000153.1 Protein Homology CDS 24395 24748 . + 0 ID=cds-WP_000008957.1-2;Parent=gene-AD11_RS22280;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AD11_RS22280;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JJLL01000153.1 RefSeq gene 24802 24881 . + . ID=gene-AD11_RS31010;Name=AD11_RS31010;end_range=24881,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31010;old_locus_tag=AD11_3867;partial=true NZ_JJLL01000153.1 Protein Homology CDS 24802 24881 . + 0 ID=cds-WP_141116835.1;Parent=gene-AD11_RS31010;Dbxref=GenBank:WP_141116835.1;Name=WP_141116835.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;end_range=24881,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AD11_RS31010;partial=true;product=ArsB/NhaD family transporter;protein_id=WP_141116835.1;transl_table=11 ##sequence-region NZ_JJLL01000154.1 1 136253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000154.1 RefSeq region 1 136253 . + . ID=NZ_JJLL01000154.1:1..136253;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000154.1 RefSeq gene 13 1149 . + . ID=gene-AD11_RS22285;Name=ydcC;gbkey=Gene;gene=ydcC;gene_biotype=protein_coding;locus_tag=AD11_RS22285;old_locus_tag=AD11_3868 NZ_JJLL01000154.1 Protein Homology CDS 13 1149 . + 0 ID=cds-WP_033866534.1;Parent=gene-AD11_RS22285;Dbxref=GenBank:WP_033866534.1;Name=WP_033866534.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=ydcC;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AD11_RS22285;product=ISAs1-like element ISEc5 family transposase;protein_id=WP_033866534.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 1249 1482 . + . ID=gene-AD11_RS22290;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AD11_RS22290;old_locus_tag=AD11_3869 NZ_JJLL01000154.1 Protein Homology CDS 1249 1482 . + 0 ID=cds-WP_001120143.1;Parent=gene-AD11_RS22290;Dbxref=GenBank:WP_001120143.1;Name=WP_001120143.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415978.1;locus_tag=AD11_RS22290;product=tautomerase PptA;protein_id=WP_001120143.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 1479 2048 . - . ID=gene-AD11_RS22295;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=AD11_RS22295;old_locus_tag=AD11_3870 NZ_JJLL01000154.1 Protein Homology CDS 1479 2048 . - 0 ID=cds-WP_000085899.1;Parent=gene-AD11_RS22295;Dbxref=GenBank:WP_000085899.1;Name=WP_000085899.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=yddH;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AD11_RS22295;product=flavin reductase family protein;protein_id=WP_000085899.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 2221 3066 . + . ID=gene-AD11_RS22300;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AD11_RS22300;old_locus_tag=AD11_3871 NZ_JJLL01000154.1 Protein Homology CDS 2221 3066 . + 0 ID=cds-WP_000187919.1;Parent=gene-AD11_RS22300;Dbxref=GenBank:WP_000187919.1;Name=WP_000187919.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AD11_RS22300;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187919.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 3162 4055 . - . ID=gene-AD11_RS22305;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=AD11_RS22305;old_locus_tag=AD11_3872 NZ_JJLL01000154.1 Protein Homology CDS 3162 4055 . - 0 ID=cds-WP_000804381.1;Parent=gene-AD11_RS22305;Dbxref=GenBank:WP_000804381.1;Name=WP_000804381.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310094.1;locus_tag=AD11_RS22305;product=PhzF family isomerase;protein_id=WP_000804381.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 4134 4814 . - . ID=gene-AD11_RS22310;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AD11_RS22310;old_locus_tag=AD11_3873 NZ_JJLL01000154.1 Protein Homology CDS 4134 4814 . - 0 ID=cds-WP_000617116.1;Parent=gene-AD11_RS22310;Dbxref=GenBank:WP_000617116.1;Name=WP_000617116.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AD11_RS22310;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617116.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 4811 5506 . - . ID=gene-AD11_RS22315;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AD11_RS22315;old_locus_tag=AD11_3874 NZ_JJLL01000154.1 Protein Homology CDS 4811 5506 . - 0 ID=cds-WP_001166353.1;Parent=gene-AD11_RS22315;Dbxref=GenBank:WP_001166353.1;Name=WP_001166353.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AD11_RS22315;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166353.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 5506 7050 . - . ID=gene-AD11_RS22320;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AD11_RS22320;old_locus_tag=AD11_3875 NZ_JJLL01000154.1 Protein Homology CDS 5506 7050 . - 0 ID=cds-WP_000702542.1;Parent=gene-AD11_RS22320;Dbxref=GenBank:WP_000702542.1;Name=WP_000702542.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310097.1;locus_tag=AD11_RS22320;product=nitrate reductase subunit beta;protein_id=WP_000702542.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 7047 10787 . - . ID=gene-AD11_RS22325;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AD11_RS22325;old_locus_tag=AD11_3876 NZ_JJLL01000154.1 Protein Homology CDS 7047 10787 . - 0 ID=cds-WP_000040469.1;Parent=gene-AD11_RS22325;Dbxref=GenBank:WP_000040469.1;Name=WP_000040469.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AD11_RS22325;product=nitrate reductase Z subunit alpha;protein_id=WP_000040469.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 10869 12257 . - . ID=gene-AD11_RS22330;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AD11_RS22330;old_locus_tag=AD11_3877 NZ_JJLL01000154.1 Protein Homology CDS 10869 12257 . - 0 ID=cds-WP_001207901.1;Parent=gene-AD11_RS22330;Dbxref=GenBank:WP_001207901.1;Name=WP_001207901.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AD11_RS22330;product=nitrate/nitrite transporter NarU;protein_id=WP_001207901.1;transl_table=11 NZ_JJLL01000154.1 RefSeq pseudogene 12581 13911 . - . ID=gene-AD11_RS22335;Name=AD11_RS22335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS22335;old_locus_tag=AD11_3878;pseudo=true NZ_JJLL01000154.1 Protein Homology CDS 12581 13911 . - 0 ID=cds-AD11_RS22335;Parent=gene-AD11_RS22335;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=AD11_RS22335;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000154.1 RefSeq pseudogene 13950 14225 . - . ID=gene-AD11_RS22340;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;locus_tag=AD11_RS22340;old_locus_tag=AD11_3879;partial=true;pseudo=true;start_range=.,13950 NZ_JJLL01000154.1 Protein Homology CDS 13950 14225 . - 0 ID=cds-AD11_RS22340;Parent=gene-AD11_RS22340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;gene=yddL;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=AD11_RS22340;partial=true;product=porin;pseudo=true;start_range=.,13950;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 14485 15366 . - . ID=gene-AD11_RS22345;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AD11_RS22345;old_locus_tag=AD11_3880 NZ_JJLL01000154.1 Protein Homology CDS 14485 15366 . - 0 ID=cds-WP_000198211.1;Parent=gene-AD11_RS22345;Dbxref=GenBank:WP_000198211.1;Name=WP_000198211.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=AD11_RS22345;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198211.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 15598 18645 . + . ID=gene-AD11_RS22355;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AD11_RS22355;old_locus_tag=AD11_3883 NZ_JJLL01000154.1 Protein Homology CDS 15598 18645 . + 0 ID=cds-WP_014639908.1;Parent=gene-AD11_RS22355;Dbxref=GenBank:WP_014639908.1;Name=WP_014639908.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415991.1;locus_tag=AD11_RS22355;product=formate dehydrogenase-N subunit alpha;protein_id=WP_014639908.1;transl_except=(pos:16183..16185%2Caa:Sec);transl_table=11 NZ_JJLL01000154.1 RefSeq gene 18658 19542 . + . ID=gene-AD11_RS22360;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AD11_RS22360;old_locus_tag=AD11_3884 NZ_JJLL01000154.1 Protein Homology CDS 18658 19542 . + 0 ID=cds-WP_001240582.1;Parent=gene-AD11_RS22360;Dbxref=GenBank:WP_001240582.1;Name=WP_001240582.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AD11_RS22360;product=formate dehydrogenase N subunit beta;protein_id=WP_001240582.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 19535 20188 . + . ID=gene-AD11_RS22365;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AD11_RS22365;old_locus_tag=AD11_3885 NZ_JJLL01000154.1 Protein Homology CDS 19535 20188 . + 0 ID=cds-WP_033865418.1;Parent=gene-AD11_RS22365;Dbxref=GenBank:WP_033865418.1;Name=WP_033865418.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AD11_RS22365;product=formate dehydrogenase-N subunit gamma;protein_id=WP_033865418.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 20417 20701 . - . ID=gene-AD11_RS22370;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=AD11_RS22370;old_locus_tag=AD11_3886 NZ_JJLL01000154.1 Protein Homology CDS 20417 20701 . - 0 ID=cds-WP_000781370.1;Parent=gene-AD11_RS22370;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yddM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AD11_RS22370;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 20846 21856 . - . ID=gene-AD11_RS22375;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AD11_RS22375;old_locus_tag=AD11_3887 NZ_JJLL01000154.1 Protein Homology CDS 20846 21856 . - 0 ID=cds-WP_000642433.1;Parent=gene-AD11_RS22375;Dbxref=GenBank:WP_000642433.1;Name=WP_000642433.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AD11_RS22375;product=alcohol dehydrogenase AdhP;protein_id=WP_000642433.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 21990 23687 . - . ID=gene-AD11_RS22380;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AD11_RS22380;old_locus_tag=AD11_3888 NZ_JJLL01000154.1 Protein Homology CDS 21990 23687 . - 0 ID=cds-WP_000433476.1;Parent=gene-AD11_RS22380;Dbxref=GenBank:WP_000433476.1;Name=WP_000433476.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415996.2;locus_tag=AD11_RS22380;product=malate dehydrogenase;protein_id=WP_000433476.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 23844 23981 . - . ID=gene-AD11_RS22385;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AD11_RS22385;old_locus_tag=AD11_3889 NZ_JJLL01000154.1 Protein Homology CDS 23844 23981 . - 0 ID=cds-WP_000841554.1;Parent=gene-AD11_RS22385;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AD11_RS22385;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 24083 24298 . - . ID=gene-AD11_RS22390;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AD11_RS22390;old_locus_tag=AD11_3890 NZ_JJLL01000154.1 Protein Homology CDS 24083 24298 . - 0 ID=cds-WP_000495771.1;Parent=gene-AD11_RS22390;Dbxref=GenBank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AD11_RS22390;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 24643 25074 . + . ID=gene-AD11_RS22395;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AD11_RS22395;old_locus_tag=AD11_3891 NZ_JJLL01000154.1 Protein Homology CDS 24643 25074 . + 0 ID=cds-WP_033865419.1;Parent=gene-AD11_RS22395;Dbxref=GenBank:WP_033865419.1;Name=WP_033865419.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AD11_RS22395;product=peroxiredoxin OsmC;protein_id=WP_033865419.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 25130 26056 . - . ID=gene-AD11_RS22400;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;locus_tag=AD11_RS22400;old_locus_tag=AD11_3892 NZ_JJLL01000154.1 Protein Homology CDS 25130 26056 . - 0 ID=cds-WP_033865420.1;Parent=gene-AD11_RS22400;Dbxref=GenBank:WP_033865420.1;Name=WP_033865420.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;gene=ddpF;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AD11_RS22400;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_033865420.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 26049 27035 . - . ID=gene-AD11_RS22405;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;locus_tag=AD11_RS22405;old_locus_tag=AD11_3893 NZ_JJLL01000154.1 Protein Homology CDS 26049 27035 . - 0 ID=cds-WP_000193568.1;Parent=gene-AD11_RS22405;Dbxref=GenBank:WP_000193568.1;Name=WP_000193568.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ddpD;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AD11_RS22405;product=ABC transporter ATP-binding protein;protein_id=WP_000193568.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 27032 27928 . - . ID=gene-AD11_RS22410;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AD11_RS22410;old_locus_tag=AD11_3894 NZ_JJLL01000154.1 Protein Homology CDS 27032 27928 . - 0 ID=cds-WP_000979630.1;Parent=gene-AD11_RS22410;Dbxref=GenBank:WP_000979630.1;Name=WP_000979630.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=AD11_RS22410;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979630.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 27925 28947 . - . ID=gene-AD11_RS22415;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;locus_tag=AD11_RS22415;old_locus_tag=AD11_3895 NZ_JJLL01000154.1 Protein Homology CDS 27925 28947 . - 0 ID=cds-WP_000145104.1;Parent=gene-AD11_RS22415;Dbxref=GenBank:WP_000145104.1;Name=WP_000145104.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ddpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AD11_RS22415;product=ABC transporter permease;protein_id=WP_000145104.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 28949 30499 . - . ID=gene-AD11_RS22420;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=protein_coding;locus_tag=AD11_RS22420;old_locus_tag=AD11_3896 NZ_JJLL01000154.1 Protein Homology CDS 28949 30499 . - 0 ID=cds-WP_000830565.1;Parent=gene-AD11_RS22420;Dbxref=GenBank:WP_000830565.1;Name=WP_000830565.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ddpA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310118.1;locus_tag=AD11_RS22420;product=ABC transporter substrate-binding protein;protein_id=WP_000830565.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 30513 31073 . - . ID=gene-AD11_RS22425;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AD11_RS22425;old_locus_tag=AD11_3897 NZ_JJLL01000154.1 Protein Homology CDS 30513 31073 . - 0 ID=cds-WP_033865422.1;Parent=gene-AD11_RS22425;Dbxref=GenBank:WP_033865422.1;Name=WP_033865422.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310119.1;locus_tag=AD11_RS22425;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_033865422.1;transl_table=11 NZ_JJLL01000154.1 RefSeq pseudogene 31331 33188 . - . ID=gene-AD11_RS22430;Name=AD11_RS22430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS22430;pseudo=true NZ_JJLL01000154.1 Protein Homology CDS 31331 33188 . - 0 ID=cds-AD11_RS22430;Parent=gene-AD11_RS22430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AD11_RS22430;product=EAL domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 33213 34595 . - . ID=gene-AD11_RS22435;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AD11_RS22435;old_locus_tag=AD11_3900 NZ_JJLL01000154.1 Protein Homology CDS 33213 34595 . - 0 ID=cds-WP_000426272.1;Parent=gene-AD11_RS22435;Dbxref=GenBank:WP_000426272.1;Name=WP_000426272.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AD11_RS22435;product=diguanylate cyclase DosC;protein_id=WP_000426272.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 34967 36286 . - . ID=gene-AD11_RS22440;Name=digH;gbkey=Gene;gene=digH;gene_biotype=protein_coding;locus_tag=AD11_RS22440;old_locus_tag=AD11_3901 NZ_JJLL01000154.1 Protein Homology CDS 34967 36286 . - 0 ID=cds-WP_000350395.1;Parent=gene-AD11_RS22440;Dbxref=GenBank:WP_000350395.1;Name=WP_000350395.1;Ontology_term=GO:0016798;gbkey=CDS;gene=digH;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AD11_RS22440;product=family 10 glycosylhydrolase;protein_id=WP_000350395.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 36417 37952 . - . ID=gene-AD11_RS22445;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AD11_RS22445;old_locus_tag=AD11_3902 NZ_JJLL01000154.1 Protein Homology CDS 36417 37952 . - 0 ID=cds-WP_000246019.1;Parent=gene-AD11_RS22445;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AD11_RS22445;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 38108 39508 . - . ID=gene-AD11_RS22450;Name=AD11_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS22450;old_locus_tag=AD11_3903 NZ_JJLL01000154.1 Protein Homology CDS 38108 39508 . - 0 ID=cds-WP_000372240.1;Parent=gene-AD11_RS22450;Dbxref=GenBank:WP_000372240.1;Name=WP_000372240.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417974.1;locus_tag=AD11_RS22450;product=glutamate decarboxylase;protein_id=WP_000372240.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 39719 41116 . - . ID=gene-AD11_RS22455;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AD11_RS22455;old_locus_tag=AD11_3904 NZ_JJLL01000154.1 Protein Homology CDS 39719 41116 . - 0 ID=cds-WP_000784825.1;Parent=gene-AD11_RS22455;Dbxref=GenBank:WP_000784825.1;Name=WP_000784825.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312425.1;locus_tag=AD11_RS22455;product=cytochrome c peroxidase;protein_id=WP_000784825.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 41521 43170 . + . ID=gene-AD11_RS22460;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AD11_RS22460;old_locus_tag=AD11_3905 NZ_JJLL01000154.1 Protein Homology CDS 41521 43170 . + 0 ID=cds-WP_000934218.1;Parent=gene-AD11_RS22460;Dbxref=GenBank:WP_000934218.1;Name=WP_000934218.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709297.1;locus_tag=AD11_RS22460;product=alpha%2Calpha-trehalase;protein_id=WP_000934218.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 43221 43823 . - . ID=gene-AD11_RS22465;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=AD11_RS22465;old_locus_tag=AD11_3906 NZ_JJLL01000154.1 Protein Homology CDS 43221 43823 . - 0 ID=cds-WP_001167676.1;Parent=gene-AD11_RS22465;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=yhjB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AD11_RS22465;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 44343 45242 . + . ID=gene-AD11_RS22470;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=AD11_RS22470;old_locus_tag=AD11_3908 NZ_JJLL01000154.1 Protein Homology CDS 44343 45242 . + 0 ID=cds-WP_001343446.1;Parent=gene-AD11_RS22470;Dbxref=GenBank:WP_001343446.1;Name=WP_001343446.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=rcdB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AD11_RS22470;product=LysR family transcriptional regulator;protein_id=WP_001343446.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 45291 46304 . + . ID=gene-AD11_RS22475;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AD11_RS22475;old_locus_tag=AD11_3909 NZ_JJLL01000154.1 Protein Homology CDS 45291 46304 . + 0 ID=cds-WP_033865809.1;Parent=gene-AD11_RS22475;Dbxref=GenBank:WP_033865809.1;Name=WP_033865809.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312429.1;locus_tag=AD11_RS22475;product=inner membrane protein YhjD;protein_id=WP_033865809.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 46715 48037 . + . ID=gene-AD11_RS22480;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=AD11_RS22480;old_locus_tag=AD11_3910 NZ_JJLL01000154.1 Protein Homology CDS 46715 48037 . + 0 ID=cds-WP_001149003.1;Parent=gene-AD11_RS22480;Dbxref=GenBank:WP_001149003.1;Name=WP_001149003.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AD11_RS22480;product=MFS transporter;protein_id=WP_001149003.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 48219 50279 . - . ID=gene-AD11_RS22485;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=AD11_RS22485;old_locus_tag=AD11_3911 NZ_JJLL01000154.1 Protein Homology CDS 48219 50279 . - 0 ID=cds-WP_001296794.1;Parent=gene-AD11_RS22485;Dbxref=GenBank:WP_001296794.1;Name=WP_001296794.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AD11_RS22485;product=AsmA family protein;protein_id=WP_001296794.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 50349 51116 . - . ID=gene-AD11_RS22490;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AD11_RS22490;old_locus_tag=AD11_3912 NZ_JJLL01000154.1 Protein Homology CDS 50349 51116 . - 0 ID=cds-WP_001295219.1;Parent=gene-AD11_RS22490;Dbxref=GenBank:WP_001295219.1;Name=WP_001295219.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AD11_RS22490;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001295219.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 51348 52277 . + . ID=gene-AD11_RS22500;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AD11_RS22500;old_locus_tag=AD11_3914 NZ_JJLL01000154.1 Protein Homology CDS 51348 52277 . + 0 ID=cds-WP_000037562.1;Parent=gene-AD11_RS22500;Dbxref=GenBank:WP_000037562.1;Name=WP_000037562.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AD11_RS22500;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_000037562.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 52373 53869 . - . ID=gene-AD11_RS22505;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=AD11_RS22505;old_locus_tag=AD11_3915 NZ_JJLL01000154.1 Protein Homology CDS 52373 53869 . - 0 ID=cds-WP_001163141.1;Parent=gene-AD11_RS22505;Dbxref=GenBank:WP_001163141.1;Name=WP_001163141.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=yhjJ;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417984.1;locus_tag=AD11_RS22505;product=M16 family metallopeptidase;protein_id=WP_001163141.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 54090 55376 . - . ID=gene-AD11_RS22510;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AD11_RS22510;old_locus_tag=AD11_3916 NZ_JJLL01000154.1 Protein Homology CDS 54090 55376 . - 0 ID=cds-WP_000858214.1;Parent=gene-AD11_RS22510;Dbxref=GenBank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AD11_RS22510;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 55559 57547 . - . ID=gene-AD11_RS22515;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AD11_RS22515;old_locus_tag=AD11_3918 NZ_JJLL01000154.1 Protein Homology CDS 55559 57547 . - 0 ID=cds-WP_001266293.1;Parent=gene-AD11_RS22515;Dbxref=GenBank:WP_001266293.1;Name=WP_001266293.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AD11_RS22515;product=biofilm formation regulator HmsP;protein_id=WP_001266293.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 57629 61102 . - . ID=gene-AD11_RS22520;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AD11_RS22520;old_locus_tag=AD11_3919 NZ_JJLL01000154.1 Protein Homology CDS 57629 61102 . - 0 ID=cds-WP_001225106.1;Parent=gene-AD11_RS22520;Dbxref=GenBank:WP_001225106.1;Name=WP_001225106.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AD11_RS22520;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_001225106.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 61084 62190 . - . ID=gene-AD11_RS22525;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AD11_RS22525;old_locus_tag=AD11_3920 NZ_JJLL01000154.1 Protein Homology CDS 61084 62190 . - 0 ID=cds-WP_001618937.1;Parent=gene-AD11_RS22525;Dbxref=GenBank:WP_001618937.1;Name=WP_001618937.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=AD11_RS22525;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001618937.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 62197 64536 . - . ID=gene-AD11_RS22530;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AD11_RS22530;old_locus_tag=AD11_3921 NZ_JJLL01000154.1 Protein Homology CDS 62197 64536 . - 0 ID=cds-WP_000823624.1;Parent=gene-AD11_RS22530;Dbxref=GenBank:WP_000823624.1;Name=WP_000823624.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AD11_RS22530;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_000823624.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 64547 67165 . - . ID=gene-AD11_RS22535;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AD11_RS22535;old_locus_tag=AD11_3922 NZ_JJLL01000154.1 Protein Homology CDS 64547 67165 . - 0 ID=cds-WP_033866536.1;Parent=gene-AD11_RS22535;Dbxref=GenBank:WP_033866536.1;Name=WP_033866536.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AD11_RS22535;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_033866536.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 67162 67914 . - . ID=gene-AD11_RS22540;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AD11_RS22540;old_locus_tag=AD11_3923 NZ_JJLL01000154.1 Protein Homology CDS 67162 67914 . - 0 ID=cds-WP_001618938.1;Parent=gene-AD11_RS22540;Dbxref=GenBank:WP_001618938.1;Name=WP_001618938.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AD11_RS22540;product=cellulose biosynthesis protein BcsQ;protein_id=WP_001618938.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 67926 68114 . - . ID=gene-AD11_RS22545;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=AD11_RS22545;old_locus_tag=AD11_3924 NZ_JJLL01000154.1 Protein Homology CDS 67926 68114 . - 0 ID=cds-WP_001063318.1;Parent=gene-AD11_RS22545;Dbxref=GenBank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=AD11_RS22545;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063318.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 68387 69958 . + . ID=gene-AD11_RS22550;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=AD11_RS22550;old_locus_tag=AD11_3925 NZ_JJLL01000154.1 Protein Homology CDS 68387 69958 . + 0 ID=cds-WP_001204909.1;Parent=gene-AD11_RS22550;Dbxref=GenBank:WP_001204909.1;Name=WP_001204909.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709312.1;locus_tag=AD11_RS22550;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_001204909.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 69955 70146 . + . ID=gene-AD11_RS22555;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AD11_RS22555;old_locus_tag=AD11_3926 NZ_JJLL01000154.1 Protein Homology CDS 69955 70146 . + 0 ID=cds-WP_000988308.1;Parent=gene-AD11_RS22555;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AD11_RS22555;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 70143 71822 . + . ID=gene-AD11_RS22560;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AD11_RS22560;old_locus_tag=AD11_3927 NZ_JJLL01000154.1 Protein Homology CDS 70143 71822 . + 0 ID=cds-WP_000191585.1;Parent=gene-AD11_RS22560;Dbxref=GenBank:WP_000191585.1;Name=WP_000191585.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417995.1;locus_tag=AD11_RS22560;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191585.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 71909 72016 . - . ID=gene-AD11_RS27500;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;locus_tag=AD11_RS27500 NZ_JJLL01000154.1 Protein Homology CDS 71909 72016 . - 0 ID=cds-WP_000141633.1;Parent=gene-AD11_RS27500;Dbxref=GenBank:WP_000141633.1;Name=WP_000141633.1;gbkey=CDS;gene=ldrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026227.1;locus_tag=AD11_RS27500;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000141633.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 72492 73763 . + . ID=gene-AD11_RS22575;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AD11_RS22575;old_locus_tag=AD11_3929 NZ_JJLL01000154.1 Protein Homology CDS 72492 73763 . + 0 ID=cds-WP_001295225.1;Parent=gene-AD11_RS22575;Dbxref=GenBank:WP_001295225.1;Name=WP_001295225.1;Ontology_term=GO:0003333;gbkey=CDS;gene=yhjV;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AD11_RS22575;product=aromatic amino acid transport family protein;protein_id=WP_001295225.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 73793 74797 . - . ID=gene-AD11_RS22580;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AD11_RS22580;old_locus_tag=AD11_3930 NZ_JJLL01000154.1 Protein Homology CDS 73793 74797 . - 0 ID=cds-WP_000107012.1;Parent=gene-AD11_RS22580;Dbxref=GenBank:WP_000107012.1;Name=WP_000107012.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417997.1;locus_tag=AD11_RS22580;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107012.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 74794 75777 . - . ID=gene-AD11_RS22585;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AD11_RS22585;old_locus_tag=AD11_3931 NZ_JJLL01000154.1 Protein Homology CDS 74794 75777 . - 0 ID=cds-WP_001196486.1;Parent=gene-AD11_RS22585;Dbxref=GenBank:WP_001196486.1;Name=WP_001196486.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AD11_RS22585;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 75788 76690 . - . ID=gene-AD11_RS22590;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AD11_RS22590;old_locus_tag=AD11_3932 NZ_JJLL01000154.1 Protein Homology CDS 75788 76690 . - 0 ID=cds-WP_000084677.1;Parent=gene-AD11_RS22590;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AD11_RS22590;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 76700 77719 . - . ID=gene-AD11_RS22595;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AD11_RS22595;old_locus_tag=AD11_3933 NZ_JJLL01000154.1 Protein Homology CDS 76700 77719 . - 0 ID=cds-WP_000938855.1;Parent=gene-AD11_RS22595;Dbxref=GenBank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AD11_RS22595;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938855.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 78027 79634 . - . ID=gene-AD11_RS22605;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AD11_RS22605;old_locus_tag=AD11_3935 NZ_JJLL01000154.1 Protein Homology CDS 78027 79634 . - 0 ID=cds-WP_001222883.1;Parent=gene-AD11_RS22605;Dbxref=GenBank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AD11_RS22605;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 80377 80510 . - . ID=gene-AD11_RS27670;Name=AD11_RS27670;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27670 NZ_JJLL01000154.1 cmsearch ncRNA 80377 80510 . - . ID=rna-AD11_RS27670;Parent=gene-AD11_RS27670;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27670;product=RtT sRNA NZ_JJLL01000154.1 cmsearch exon 80377 80510 . - . ID=exon-AD11_RS27670-1;Parent=rna-AD11_RS27670;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27670;product=RtT sRNA NZ_JJLL01000154.1 RefSeq gene 80545 80678 . - . ID=gene-AD11_RS27675;Name=AD11_RS27675;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AD11_RS27675 NZ_JJLL01000154.1 cmsearch ncRNA 80545 80678 . - . ID=rna-AD11_RS27675;Parent=gene-AD11_RS27675;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27675;product=RtT sRNA NZ_JJLL01000154.1 cmsearch exon 80545 80678 . - . ID=exon-AD11_RS27675-1;Parent=rna-AD11_RS27675;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS27675;product=RtT sRNA NZ_JJLL01000154.1 RefSeq gene 80713 80789 . - . ID=gene-AD11_RS22615;Name=AD11_RS22615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS22615;old_locus_tag=AD11_3937 NZ_JJLL01000154.1 tRNAscan-SE tRNA 80713 80789 . - . ID=rna-AD11_RS22615;Parent=gene-AD11_RS22615;anticodon=(pos:complement(80753..80755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS22615;product=tRNA-Pro NZ_JJLL01000154.1 tRNAscan-SE exon 80713 80789 . - . ID=exon-AD11_RS22615-1;Parent=rna-AD11_RS22615;anticodon=(pos:complement(80753..80755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS22615;product=tRNA-Pro NZ_JJLL01000154.1 RefSeq gene 80881 82572 . - . ID=gene-AD11_RS22620;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AD11_RS22620;old_locus_tag=AD11_3938 NZ_JJLL01000154.1 Protein Homology CDS 80881 82572 . - 0 ID=cds-WP_001269197.1;Parent=gene-AD11_RS22620;Dbxref=GenBank:WP_001269197.1;Name=WP_001269197.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AD11_RS22620;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269197.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 82896 84104 . - . ID=gene-AD11_RS22625;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AD11_RS22625;old_locus_tag=AD11_3939 NZ_JJLL01000154.1 Protein Homology CDS 82896 84104 . - 0 ID=cds-WP_000189019.1;Parent=gene-AD11_RS22625;Dbxref=GenBank:WP_000189019.1;Name=WP_000189019.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418003.1;locus_tag=AD11_RS22625;product=L-lactate MFS transporter;protein_id=WP_000189019.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 84333 85031 . - . ID=gene-AD11_RS22630;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=AD11_RS22630;old_locus_tag=AD11_3940 NZ_JJLL01000154.1 Protein Homology CDS 84333 85031 . - 0 ID=cds-WP_001299523.1;Parent=gene-AD11_RS22630;Dbxref=GenBank:WP_001299523.1;Name=WP_001299523.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418004.4;locus_tag=AD11_RS22630;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001299523.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 85189 85752 . + . ID=gene-AD11_RS22635;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AD11_RS22635;old_locus_tag=AD11_3941 NZ_JJLL01000154.1 Protein Homology CDS 85189 85752 . + 0 ID=cds-WP_000438957.1;Parent=gene-AD11_RS22635;Dbxref=GenBank:WP_000438957.1;Name=WP_000438957.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AD11_RS22635;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438957.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 85749 86189 . + . ID=gene-AD11_RS22640;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AD11_RS22640;old_locus_tag=AD11_3942 NZ_JJLL01000154.1 Protein Homology CDS 85749 86189 . + 0 ID=cds-WP_000617473.1;Parent=gene-AD11_RS22640;Dbxref=GenBank:WP_000617473.1;Name=WP_000617473.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418006.1;locus_tag=AD11_RS22640;product=N-acetyltransferase;protein_id=WP_000617473.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 86158 88491 . - . ID=gene-AD11_RS22645;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AD11_RS22645;old_locus_tag=AD11_3943 NZ_JJLL01000154.1 Protein Homology CDS 86158 88491 . - 0 ID=cds-WP_071998712.1;Parent=gene-AD11_RS22645;Dbxref=GenBank:WP_071998712.1;Name=WP_071998712.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AD11_RS22645;product=biotin sulfoxide reductase;protein_id=WP_071998712.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 88644 89303 . + . ID=gene-AD11_RS22650;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AD11_RS22650;old_locus_tag=AD11_3944 NZ_JJLL01000154.1 Protein Homology CDS 88644 89303 . + 0 ID=cds-WP_000747625.1;Parent=gene-AD11_RS22650;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AD11_RS22650;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 89407 90381 . + . ID=gene-AD11_RS22655;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AD11_RS22655;old_locus_tag=AD11_3945 NZ_JJLL01000154.1 Protein Homology CDS 89407 90381 . + 0 ID=cds-WP_000805038.1;Parent=gene-AD11_RS22655;Dbxref=GenBank:WP_000805038.1;Name=WP_000805038.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418009.2;locus_tag=AD11_RS22655;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805038.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 90431 91141 . - . ID=gene-AD11_RS22660;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AD11_RS22660;old_locus_tag=AD11_3946 NZ_JJLL01000154.1 Protein Homology CDS 90431 91141 . - 0 ID=cds-WP_000190516.1;Parent=gene-AD11_RS22660;Dbxref=GenBank:WP_000190516.1;Name=WP_000190516.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AD11_RS22660;product=DUF3053 domain-containing protein;protein_id=WP_000190516.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 91575 91865 . + . ID=gene-AD11_RS22665;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AD11_RS22665;old_locus_tag=AD11_3947 NZ_JJLL01000154.1 Protein Homology CDS 91575 91865 . + 0 ID=cds-WP_000455798.1;Parent=gene-AD11_RS22665;Dbxref=GenBank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AD11_RS22665;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 92146 92358 . + . ID=gene-AD11_RS22670;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AD11_RS22670;old_locus_tag=AD11_3948 NZ_JJLL01000154.1 Protein Homology CDS 92146 92358 . + 0 ID=cds-WP_000014594.1;Parent=gene-AD11_RS22670;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AD11_RS22670;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 92497 92568 . + . ID=gene-AD11_RS32745;Name=ysaE;gbkey=Gene;gene=ysaE;gene_biotype=protein_coding;locus_tag=AD11_RS32745 NZ_JJLL01000154.1 Protein Homology CDS 92497 92568 . + 0 ID=cds-WP_211180513.1;Parent=gene-AD11_RS32745;Dbxref=GenBank:WP_211180513.1;Name=WP_211180513.1;gbkey=CDS;gene=ysaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AD11_RS32745;product=protein YsaE;protein_id=WP_211180513.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 92545 92697 . - . ID=gene-AD11_RS22675;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AD11_RS22675;old_locus_tag=AD11_3949 NZ_JJLL01000154.1 Protein Homology CDS 92545 92697 . - 0 ID=cds-WP_001135732.1;Parent=gene-AD11_RS22675;Dbxref=GenBank:WP_001135732.1;Name=WP_001135732.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AD11_RS22675;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135732.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 92777 94146 . + . ID=gene-AD11_RS31015;Name=AD11_RS31015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31015 NZ_JJLL01000154.1 Protein Homology CDS 92777 93257 . + 0 ID=cds-WP_085947770.1;Parent=gene-AD11_RS31015;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AD11_RS31015;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JJLL01000154.1 Protein Homology CDS 93257 94146 . + 2 ID=cds-WP_085947770.1;Parent=gene-AD11_RS31015;Dbxref=GenBank:WP_085947770.1;Name=WP_085947770.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AD11_RS31015;product=IS3-like element IS150 family transposase;protein_id=WP_085947770.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 94428 96497 . - . ID=gene-AD11_RS22690;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AD11_RS22690;old_locus_tag=AD11_3952 NZ_JJLL01000154.1 Protein Homology CDS 94428 96497 . - 0 ID=cds-WP_001291772.1;Parent=gene-AD11_RS22690;Dbxref=GenBank:WP_001291772.1;Name=WP_001291772.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AD11_RS22690;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291772.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 96507 97418 . - . ID=gene-AD11_RS22695;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AD11_RS22695;old_locus_tag=AD11_3953 NZ_JJLL01000154.1 Protein Homology CDS 96507 97418 . - 0 ID=cds-WP_001168544.1;Parent=gene-AD11_RS22695;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AD11_RS22695;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 97513 97812 . - . ID=gene-AD11_RS22700;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AD11_RS22700;old_locus_tag=AD11_3954 NZ_JJLL01000154.1 Protein Homology CDS 97513 97812 . - 0 ID=cds-WP_000980107.1;Parent=gene-AD11_RS22700;Dbxref=GenBank:WP_000980107.1;Name=WP_000980107.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588469.1;locus_tag=AD11_RS22700;product=YsaB family lipoprotein;protein_id=WP_000980107.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 97987 98982 . + . ID=gene-AD11_RS22705;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AD11_RS22705;old_locus_tag=AD11_3955 NZ_JJLL01000154.1 Protein Homology CDS 97987 98982 . + 0 ID=cds-WP_033865815.1;Parent=gene-AD11_RS22705;Dbxref=GenBank:WP_033865815.1;Name=WP_033865815.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418018.1;locus_tag=AD11_RS22705;product=O-acetyltransferase WecH;protein_id=WP_033865815.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 99024 99461 . - . ID=gene-AD11_RS22710;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AD11_RS22710;old_locus_tag=AD11_3956 NZ_JJLL01000154.1 Protein Homology CDS 99024 99461 . - 0 ID=cds-WP_001296808.1;Parent=gene-AD11_RS22710;Dbxref=GenBank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AD11_RS22710;product=inner membrane protein YiaA;protein_id=WP_001296808.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 99507 99848 . - . ID=gene-AD11_RS22715;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AD11_RS22715;old_locus_tag=AD11_3957 NZ_JJLL01000154.1 Protein Homology CDS 99507 99848 . - 0 ID=cds-WP_001295228.1;Parent=gene-AD11_RS22715;Dbxref=GenBank:WP_001295228.1;Name=WP_001295228.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418020.2;locus_tag=AD11_RS22715;product=inner membrane protein YiaB;protein_id=WP_001295228.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 100017 101471 . - . ID=gene-AD11_RS22720;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AD11_RS22720;old_locus_tag=AD11_3958 NZ_JJLL01000154.1 Protein Homology CDS 100017 101471 . - 0 ID=cds-WP_033865816.1;Parent=gene-AD11_RS22720;Dbxref=GenBank:WP_033865816.1;Name=WP_033865816.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418021.1;locus_tag=AD11_RS22720;product=xylulokinase;protein_id=WP_033865816.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 101543 102865 . - . ID=gene-AD11_RS22725;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AD11_RS22725;old_locus_tag=AD11_3959 NZ_JJLL01000154.1 Protein Homology CDS 101543 102865 . - 0 ID=cds-WP_032083851.1;Parent=gene-AD11_RS22725;Dbxref=GenBank:WP_032083851.1;Name=WP_032083851.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418022.1;locus_tag=AD11_RS22725;product=xylose isomerase;protein_id=WP_032083851.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 103231 104223 . + . ID=gene-AD11_RS22730;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AD11_RS22730;old_locus_tag=AD11_3960 NZ_JJLL01000154.1 Protein Homology CDS 103231 104223 . + 0 ID=cds-WP_001300957.1;Parent=gene-AD11_RS22730;Dbxref=GenBank:WP_001300957.1;Name=WP_001300957.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312476.1;locus_tag=AD11_RS22730;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_001300957.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 104301 105842 . + . ID=gene-AD11_RS22735;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AD11_RS22735;old_locus_tag=AD11_3961 NZ_JJLL01000154.1 Protein Homology CDS 104301 105842 . + 0 ID=cds-WP_001146479.1;Parent=gene-AD11_RS22735;Dbxref=GenBank:WP_001146479.1;Name=WP_001146479.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AD11_RS22735;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146479.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 105820 107001 . + . ID=gene-AD11_RS22740;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AD11_RS22740;old_locus_tag=AD11_3962 NZ_JJLL01000154.1 Protein Homology CDS 105820 107001 . + 0 ID=cds-WP_000045978.1;Parent=gene-AD11_RS22740;Dbxref=GenBank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AD11_RS22740;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 107079 108257 . + . ID=gene-AD11_RS22745;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AD11_RS22745;old_locus_tag=AD11_3963 NZ_JJLL01000154.1 Protein Homology CDS 107079 108257 . + 0 ID=cds-WP_033866538.1;Parent=gene-AD11_RS22745;Dbxref=GenBank:WP_033866538.1;Name=WP_033866538.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AD11_RS22745;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_033866538.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 108453 109277 . - . ID=gene-AD11_RS22750;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AD11_RS22750;old_locus_tag=AD11_3964 NZ_JJLL01000154.1 Protein Homology CDS 108453 109277 . - 0 ID=cds-WP_001297957.1;Parent=gene-AD11_RS22750;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AD11_RS22750;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 109597 111627 . + . ID=gene-AD11_RS22755;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AD11_RS22755;old_locus_tag=AD11_3965 NZ_JJLL01000154.1 Protein Homology CDS 109597 111627 . + 0 ID=cds-WP_032083850.1;Parent=gene-AD11_RS22755;Dbxref=GenBank:WP_032083850.1;Name=WP_032083850.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418028.1;locus_tag=AD11_RS22755;product=alpha-amylase;protein_id=WP_032083850.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 111805 113058 . + . ID=gene-AD11_RS22760;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AD11_RS22760;old_locus_tag=AD11_3966 NZ_JJLL01000154.1 Protein Homology CDS 111805 113058 . + 0 ID=cds-WP_032189007.1;Parent=gene-AD11_RS22760;Dbxref=GenBank:WP_032189007.1;Name=WP_032189007.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026231.1;locus_tag=AD11_RS22760;product=valine--pyruvate transaminase;protein_id=WP_032189007.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 113209 113682 . - . ID=gene-AD11_RS22770;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AD11_RS22770;old_locus_tag=AD11_3967 NZ_JJLL01000154.1 Protein Homology CDS 113209 113682 . - 0 ID=cds-WP_032083849.1;Parent=gene-AD11_RS22770;Dbxref=GenBank:WP_032083849.1;Name=WP_032083849.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312483.1;locus_tag=AD11_RS22770;product=4Fe-4S binding protein;protein_id=WP_032083849.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 113784 114632 . - . ID=gene-AD11_RS22775;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AD11_RS22775;old_locus_tag=AD11_3968 NZ_JJLL01000154.1 Protein Homology CDS 113784 114632 . - 0 ID=cds-WP_000514240.1;Parent=gene-AD11_RS22775;Dbxref=GenBank:WP_000514240.1;Name=WP_000514240.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AD11_RS22775;product=IclR family transcriptional regulator YiaJ;protein_id=WP_000514240.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 114833 115831 . + . ID=gene-AD11_RS22780;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AD11_RS22780;old_locus_tag=AD11_3969 NZ_JJLL01000154.1 Protein Homology CDS 114833 115831 . + 0 ID=cds-WP_000869037.1;Parent=gene-AD11_RS22780;Dbxref=GenBank:WP_000869037.1;Name=WP_000869037.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418032.1;locus_tag=AD11_RS22780;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869037.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 115843 116310 . + . ID=gene-AD11_RS22785;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;locus_tag=AD11_RS22785;old_locus_tag=AD11_3970 NZ_JJLL01000154.1 Protein Homology CDS 115843 116310 . + 0 ID=cds-WP_000576079.1;Parent=gene-AD11_RS22785;Dbxref=GenBank:WP_000576079.1;Name=WP_000576079.1;gbkey=CDS;gene=yiaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AD11_RS22785;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576079.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 116428 116901 . + . ID=gene-AD11_RS22790;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=AD11_RS22790;old_locus_tag=AD11_3971 NZ_JJLL01000154.1 Protein Homology CDS 116428 116901 . + 0 ID=cds-WP_000721664.1;Parent=gene-AD11_RS22790;Dbxref=GenBank:WP_000721664.1;Name=WP_000721664.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418034.1;locus_tag=AD11_RS22790;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000721664.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 116904 118181 . + . ID=gene-AD11_RS22795;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=AD11_RS22795;old_locus_tag=AD11_3972 NZ_JJLL01000154.1 Protein Homology CDS 116904 118181 . + 0 ID=cds-WP_033865820.1;Parent=gene-AD11_RS22795;Dbxref=GenBank:WP_033865820.1;Name=WP_033865820.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=AD11_RS22795;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_033865820.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 118194 119180 . + . ID=gene-AD11_RS22800;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=AD11_RS22800;old_locus_tag=AD11_3973 NZ_JJLL01000154.1 Protein Homology CDS 118194 119180 . + 0 ID=cds-WP_000776887.1;Parent=gene-AD11_RS22800;Dbxref=GenBank:WP_000776887.1;Name=WP_000776887.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=AD11_RS22800;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_000776887.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 119184 120680 . + . ID=gene-AD11_RS22805;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=AD11_RS22805;old_locus_tag=AD11_3974 NZ_JJLL01000154.1 Protein Homology CDS 119184 120680 . + 0 ID=cds-WP_000196054.1;Parent=gene-AD11_RS22805;Dbxref=GenBank:WP_000196054.1;Name=WP_000196054.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=AD11_RS22805;product=L-xylulokinase;protein_id=WP_000196054.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 120677 121339 . + . ID=gene-AD11_RS22810;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AD11_RS22810;old_locus_tag=AD11_3975 NZ_JJLL01000154.1 Protein Homology CDS 120677 121339 . + 0 ID=cds-WP_000089481.1;Parent=gene-AD11_RS22810;Dbxref=GenBank:WP_000089481.1;Name=WP_000089481.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=AD11_RS22810;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089481.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 121332 122192 . + . ID=gene-AD11_RS22815;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;locus_tag=AD11_RS22815;old_locus_tag=AD11_3976 NZ_JJLL01000154.1 Protein Homology CDS 121332 122192 . + 0 ID=cds-WP_001295230.1;Parent=gene-AD11_RS22815;Dbxref=GenBank:WP_001295230.1;Name=WP_001295230.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;gene=sgbU;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=AD11_RS22815;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001295230.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 122186 122881 . + . ID=gene-AD11_RS22820;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AD11_RS22820;old_locus_tag=AD11_3977 NZ_JJLL01000154.1 Protein Homology CDS 122186 122881 . + 0 ID=cds-WP_000893142.1;Parent=gene-AD11_RS22820;Dbxref=GenBank:WP_000893142.1;Name=WP_000893142.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=AD11_RS22820;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893142.1;transl_table=11 NZ_JJLL01000154.1 RefSeq pseudogene 122913 123014 . - . ID=gene-AD11_RS32245;Name=AD11_RS32245;end_range=123014,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32245;partial=true;pseudo=true NZ_JJLL01000154.1 Protein Homology CDS 122913 123014 . - 0 ID=cds-AD11_RS32245;Parent=gene-AD11_RS32245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=123014,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=AD11_RS32245;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLL01000154.1 RefSeq pseudogene 123018 123206 . + . ID=gene-AD11_RS31775;Name=AD11_RS31775;end_range=123206,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31775;partial=true;pseudo=true;start_range=.,123018 NZ_JJLL01000154.1 Protein Homology CDS 123018 123206 . + 0 ID=cds-AD11_RS31775;Parent=gene-AD11_RS31775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=123206,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=AD11_RS31775;partial=true;product=hypothetical protein;pseudo=true;start_range=.,123018;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 123228 123968 . - . ID=gene-AD11_RS22825;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=AD11_RS22825;old_locus_tag=AD11_3978 NZ_JJLL01000154.1 Protein Homology CDS 123228 123968 . - 0 ID=cds-WP_000906819.1;Parent=gene-AD11_RS22825;Dbxref=GenBank:WP_000906819.1;Name=WP_000906819.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;gene=yiaT;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418041.1;locus_tag=AD11_RS22825;product=MipA/OmpV family protein;protein_id=WP_000906819.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 124092 125066 . + . ID=gene-AD11_RS22830;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=AD11_RS22830;old_locus_tag=AD11_3979 NZ_JJLL01000154.1 Protein Homology CDS 124092 125066 . + 0 ID=cds-WP_000164036.1;Parent=gene-AD11_RS22830;Dbxref=GenBank:WP_000164036.1;Name=WP_000164036.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiaU;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418042.1;locus_tag=AD11_RS22830;product=LysR family transcriptional regulator;protein_id=WP_000164036.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 125063 126199 . - . ID=gene-AD11_RS22835;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;locus_tag=AD11_RS22835;old_locus_tag=AD11_3980 NZ_JJLL01000154.1 Protein Homology CDS 125063 126199 . - 0 ID=cds-WP_032200880.1;Parent=gene-AD11_RS22835;Dbxref=GenBank:WP_032200880.1;Name=WP_032200880.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yiaV;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=AD11_RS22835;product=HlyD family secretion protein;protein_id=WP_032200880.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 126205 126528 . - . ID=gene-AD11_RS22840;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=AD11_RS22840;old_locus_tag=AD11_3981 NZ_JJLL01000154.1 Protein Homology CDS 126205 126528 . - 0 ID=cds-WP_000478195.1;Parent=gene-AD11_RS22840;Dbxref=GenBank:WP_000478195.1;Name=WP_000478195.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AD11_RS22840;product=DUF3302 domain-containing protein;protein_id=WP_000478195.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 126711 126854 . + . ID=gene-AD11_RS32140;Name=AD11_RS32140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32140;old_locus_tag=AD11_3982 NZ_JJLL01000154.1 GeneMarkS-2+ CDS 126711 126854 . + 0 ID=cds-WP_001066080.1;Parent=gene-AD11_RS32140;Dbxref=GenBank:WP_001066080.1;Name=WP_001066080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32140;product=hypothetical protein;protein_id=WP_001066080.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 127073 128611 . - . ID=gene-AD11_RS22850;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=AD11_RS22850;old_locus_tag=AD11_3983 NZ_JJLL01000154.1 Protein Homology CDS 127073 128611 . - 0 ID=cds-WP_000183980.1;Parent=gene-AD11_RS22850;Dbxref=GenBank:WP_000183980.1;Name=WP_000183980.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AD11_RS22850;product=aldehyde dehydrogenase AldB;protein_id=WP_000183980.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 128776 129927 . - . ID=gene-AD11_RS22855;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AD11_RS22855;old_locus_tag=AD11_3984 NZ_JJLL01000154.1 Protein Homology CDS 128776 129927 . - 0 ID=cds-WP_000168714.1;Parent=gene-AD11_RS22855;Dbxref=GenBank:WP_000168714.1;Name=WP_000168714.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312493.1;locus_tag=AD11_RS22855;product=L-threonine dehydrogenase;protein_id=WP_000168714.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 130117 131961 . - . ID=gene-AD11_RS22860;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AD11_RS22860;old_locus_tag=AD11_3985 NZ_JJLL01000154.1 Protein Homology CDS 130117 131961 . - 0 ID=cds-WP_000582492.1;Parent=gene-AD11_RS22860;Dbxref=GenBank:WP_000582492.1;Name=WP_000582492.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AD11_RS22860;product=selenocysteine-specific translation elongation factor;protein_id=WP_000582492.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 131958 133349 . - . ID=gene-AD11_RS22865;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AD11_RS22865;old_locus_tag=AD11_3986 NZ_JJLL01000154.1 Protein Homology CDS 131958 133349 . - 0 ID=cds-WP_000206271.1;Parent=gene-AD11_RS22865;Dbxref=GenBank:WP_000206271.1;Name=WP_000206271.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AD11_RS22865;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_000206271.1;transl_table=11 NZ_JJLL01000154.1 RefSeq gene 133447 134055 . - . ID=gene-AD11_RS22870;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AD11_RS22870;old_locus_tag=AD11_3987 NZ_JJLL01000154.1 Protein Homology CDS 133447 134055 . - 0 ID=cds-WP_000779792.1;Parent=gene-AD11_RS22870;Dbxref=GenBank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AD11_RS22870;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_JJLL01000154.1 RefSeq pseudogene 134284 136253 . + . ID=gene-AD11_RS22875;Name=rhsC;end_range=136253,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AD11_RS22875;old_locus_tag=AD11_3989;partial=true;pseudo=true NZ_JJLL01000154.1 Protein Homology CDS 134284 136253 . + 0 ID=cds-AD11_RS22875;Parent=gene-AD11_RS22875;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=136253,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AD11_RS22875;partial=true;product=rhs element protein RhsC;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000155.1 1 94659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000155.1 RefSeq region 1 94659 . + . ID=NZ_JJLL01000155.1:1..94659;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000155.1 RefSeq gene 1 872 . + . ID=gene-AD11_RS22890;Name=AD11_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS22890;old_locus_tag=AD11_3990;partial=true;start_range=.,1 NZ_JJLL01000155.1 Protein Homology CDS 1 872 . + 2 ID=cds-WP_187439461.1;Parent=gene-AD11_RS22890;Dbxref=GenBank:WP_187439461.1;Name=WP_187439461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD11_RS22890;partial=true;product=polymorphic toxin type 34 domain-containing protein;protein_id=WP_187439461.1;start_range=.,1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 893 1735 . + . ID=gene-AD11_RS22895;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;locus_tag=AD11_RS22895;old_locus_tag=AD11_3991 NZ_JJLL01000155.1 Protein Homology CDS 893 1735 . + 0 ID=cds-WP_000072850.1;Parent=gene-AD11_RS22895;Dbxref=GenBank:WP_000072850.1;Name=WP_000072850.1;gbkey=CDS;gene=yibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AD11_RS22895;product=HEAT repeat domain-containing protein;protein_id=WP_000072850.1;transl_table=11 NZ_JJLL01000155.1 RefSeq pseudogene 1765 2232 . + . ID=gene-AD11_RS32750;Name=AD11_RS32750;end_range=2232,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32750;partial=true;pseudo=true;start_range=.,1765 NZ_JJLL01000155.1 Protein Homology CDS 1765 2232 . + 0 ID=cds-AD11_RS32750;Parent=gene-AD11_RS32750;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2232,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AD11_RS32750;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1765;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 2362 2721 . + . ID=gene-AD11_RS32755;Name=AD11_RS32755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32755 NZ_JJLL01000155.1 GeneMarkS-2+ CDS 2362 2721 . + 0 ID=cds-WP_099355921.1;Parent=gene-AD11_RS32755;Dbxref=GenBank:WP_099355921.1;Name=WP_099355921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32755;product=type IV secretion protein Rhs;protein_id=WP_099355921.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 2733 3194 . + . ID=gene-AD11_RS22910;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;locus_tag=AD11_RS22910 NZ_JJLL01000155.1 Protein Homology CDS 2733 3194 . + 0 ID=cds-WP_000642489.1;Parent=gene-AD11_RS22910;Dbxref=GenBank:WP_000642489.1;Name=WP_000642489.1;gbkey=CDS;gene=yibG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=AD11_RS22910;product=sel1 repeat family protein;protein_id=WP_000642489.1;transl_table=11 NZ_JJLL01000155.1 RefSeq pseudogene 3228 3446 . + . ID=gene-AD11_RS33230;Name=AD11_RS33230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33230;partial=true;pseudo=true;start_range=.,3228 NZ_JJLL01000155.1 Protein Homology CDS 3228 3446 . + 0 ID=cds-AD11_RS33230;Parent=gene-AD11_RS33230;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235166.1;locus_tag=AD11_RS33230;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3228;transl_table=11 NZ_JJLL01000155.1 RefSeq pseudogene 3818 4338 . + . ID=gene-AD11_RS22915;Name=AD11_RS22915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS22915;pseudo=true NZ_JJLL01000155.1 Protein Homology CDS 3818 4338 . + 0 ID=cds-AD11_RS22915;Parent=gene-AD11_RS22915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626253.1;locus_tag=AD11_RS22915;product=Imm57 family immunity protein;pseudo=true;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 4798 5934 . - . ID=gene-AD11_RS22920;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AD11_RS22920;old_locus_tag=AD11_3994 NZ_JJLL01000155.1 Protein Homology CDS 4798 5934 . - 0 ID=cds-WP_000364939.1;Parent=gene-AD11_RS22920;Dbxref=GenBank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AD11_RS22920;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 5937 6299 . - . ID=gene-AD11_RS22925;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AD11_RS22925;old_locus_tag=AD11_3995 NZ_JJLL01000155.1 Protein Homology CDS 5937 6299 . - 0 ID=cds-WP_000479624.1;Parent=gene-AD11_RS22925;Dbxref=GenBank:WP_000479624.1;Name=WP_000479624.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=AD11_RS22925;product=DUF3302 domain-containing protein;protein_id=WP_000479624.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 6836 8749 . + . ID=gene-AD11_RS22930;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AD11_RS22930;old_locus_tag=AD11_3996 NZ_JJLL01000155.1 Protein Homology CDS 6836 8749 . + 0 ID=cds-WP_000093247.1;Parent=gene-AD11_RS22930;Dbxref=GenBank:WP_000093247.1;Name=WP_000093247.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418056.1;locus_tag=AD11_RS22930;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093247.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 8979 10127 . + . ID=gene-AD11_RS22935;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AD11_RS22935;old_locus_tag=AD11_3997 NZ_JJLL01000155.1 Protein Homology CDS 8979 10127 . + 0 ID=cds-WP_000645420.1;Parent=gene-AD11_RS22935;Dbxref=GenBank:WP_000645420.1;Name=WP_000645420.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418057.1;locus_tag=AD11_RS22935;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645420.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 10127 10714 . + . ID=gene-AD11_RS22940;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AD11_RS22940;old_locus_tag=AD11_3998 NZ_JJLL01000155.1 Protein Homology CDS 10127 10714 . + 0 ID=cds-WP_000228269.1;Parent=gene-AD11_RS22940;Dbxref=GenBank:WP_000228269.1;Name=WP_000228269.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418058.1;locus_tag=AD11_RS22940;product=mannitol operon repressor MtlR;protein_id=WP_000228269.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 10726 10935 . - . ID=gene-AD11_RS22945;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AD11_RS22945;old_locus_tag=AD11_3999 NZ_JJLL01000155.1 Protein Homology CDS 10726 10935 . - 0 ID=cds-WP_000517100.1;Parent=gene-AD11_RS22945;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AD11_RS22945;product=protein YibT;protein_id=WP_000517100.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 11220 11582 . + . ID=gene-AD11_RS22950;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AD11_RS22950;old_locus_tag=AD11_4000 NZ_JJLL01000155.1 Protein Homology CDS 11220 11582 . + 0 ID=cds-WP_000665680.1;Parent=gene-AD11_RS22950;Dbxref=GenBank:WP_000665680.1;Name=WP_000665680.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AD11_RS22950;product=YibL family ribosome-associated protein;protein_id=WP_000665680.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 11954 13609 . + . ID=gene-AD11_RS22955;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AD11_RS22955;old_locus_tag=AD11_4001 NZ_JJLL01000155.1 Protein Homology CDS 11954 13609 . + 0 ID=cds-WP_001295233.1;Parent=gene-AD11_RS22955;Dbxref=GenBank:WP_001295233.1;Name=WP_001295233.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418060.1;locus_tag=AD11_RS22955;product=L-lactate permease;protein_id=WP_001295233.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 13609 14385 . + . ID=gene-AD11_RS22960;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AD11_RS22960;old_locus_tag=AD11_4002 NZ_JJLL01000155.1 Protein Homology CDS 13609 14385 . + 0 ID=cds-WP_000636500.1;Parent=gene-AD11_RS22960;Dbxref=GenBank:WP_000636500.1;Name=WP_000636500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AD11_RS22960;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 14382 15572 . + . ID=gene-AD11_RS22965;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AD11_RS22965;old_locus_tag=AD11_4003 NZ_JJLL01000155.1 Protein Homology CDS 14382 15572 . + 0 ID=cds-WP_000586962.1;Parent=gene-AD11_RS22965;Dbxref=GenBank:WP_000586962.1;Name=WP_000586962.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418062.1;locus_tag=AD11_RS22965;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586962.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 15726 16199 . + . ID=gene-AD11_RS22970;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AD11_RS22970;old_locus_tag=AD11_4004 NZ_JJLL01000155.1 Protein Homology CDS 15726 16199 . + 0 ID=cds-WP_000932344.1;Parent=gene-AD11_RS22970;Dbxref=GenBank:WP_000932344.1;Name=WP_000932344.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312511.1;locus_tag=AD11_RS22970;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932344.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 16252 17073 . - . ID=gene-AD11_RS22975;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AD11_RS22975;old_locus_tag=AD11_4005 NZ_JJLL01000155.1 Protein Homology CDS 16252 17073 . - 0 ID=cds-WP_001277561.1;Parent=gene-AD11_RS22975;Dbxref=GenBank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AD11_RS22975;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 17153 18172 . - . ID=gene-AD11_RS22980;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AD11_RS22980;old_locus_tag=AD11_4006 NZ_JJLL01000155.1 Protein Homology CDS 17153 18172 . - 0 ID=cds-WP_001076194.1;Parent=gene-AD11_RS22980;Dbxref=GenBank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AD11_RS22980;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 18172 18639 . - . ID=gene-AD11_RS22985;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AD11_RS22985;old_locus_tag=AD11_4007 NZ_JJLL01000155.1 Protein Homology CDS 18172 18639 . - 0 ID=cds-WP_000003377.1;Parent=gene-AD11_RS22985;Dbxref=GenBank:WP_000003377.1;Name=WP_000003377.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AD11_RS22985;product=protein-export chaperone SecB;protein_id=WP_000003377.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 18702 18953 . - . ID=gene-AD11_RS22990;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AD11_RS22990;old_locus_tag=AD11_4008 NZ_JJLL01000155.1 Protein Homology CDS 18702 18953 . - 0 ID=cds-WP_000024392.1;Parent=gene-AD11_RS22990;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AD11_RS22990;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 19095 19526 . - . ID=gene-AD11_RS22995;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AD11_RS22995;old_locus_tag=AD11_4009 NZ_JJLL01000155.1 Protein Homology CDS 19095 19526 . - 0 ID=cds-WP_001156181.1;Parent=gene-AD11_RS22995;Dbxref=GenBank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AD11_RS22995;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 19771 21315 . + . ID=gene-AD11_RS23000;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AD11_RS23000;old_locus_tag=AD11_4010 NZ_JJLL01000155.1 Protein Homology CDS 19771 21315 . + 0 ID=cds-WP_000116565.1;Parent=gene-AD11_RS23000;Dbxref=GenBank:WP_000116565.1;Name=WP_000116565.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=AD11_RS23000;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_000116565.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 21349 22608 . + . ID=gene-AD11_RS23005;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AD11_RS23005;old_locus_tag=AD11_4011 NZ_JJLL01000155.1 Protein Homology CDS 21349 22608 . + 0 ID=cds-WP_000196256.1;Parent=gene-AD11_RS23005;Dbxref=GenBank:WP_000196256.1;Name=WP_000196256.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AD11_RS23005;product=murein hydrolase activator EnvC;protein_id=WP_000196256.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 22612 23571 . + . ID=gene-AD11_RS23010;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AD11_RS23010;old_locus_tag=AD11_4012 NZ_JJLL01000155.1 Protein Homology CDS 22612 23571 . + 0 ID=cds-WP_000483856.1;Parent=gene-AD11_RS23010;Dbxref=GenBank:WP_000483856.1;Name=WP_000483856.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312519.2;locus_tag=AD11_RS23010;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483856.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 23558 24592 . - . ID=gene-AD11_RS23015;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AD11_RS23015;old_locus_tag=AD11_4013 NZ_JJLL01000155.1 Protein Homology CDS 23558 24592 . - 0 ID=cds-WP_000982091.1;Parent=gene-AD11_RS23015;Dbxref=GenBank:WP_000982091.1;Name=WP_000982091.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418072.1;locus_tag=AD11_RS23015;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982091.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 24831 25856 . - . ID=gene-AD11_RS23020;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AD11_RS23020;old_locus_tag=AD11_4014 NZ_JJLL01000155.1 Protein Homology CDS 24831 25856 . - 0 ID=cds-WP_000646007.1;Parent=gene-AD11_RS23020;Dbxref=GenBank:WP_000646007.1;Name=WP_000646007.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AD11_RS23020;product=L-threonine 3-dehydrogenase;protein_id=WP_000646007.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 25866 27062 . - . ID=gene-AD11_RS23025;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AD11_RS23025;old_locus_tag=AD11_4015 NZ_JJLL01000155.1 Protein Homology CDS 25866 27062 . - 0 ID=cds-WP_001213834.1;Parent=gene-AD11_RS23025;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AD11_RS23025;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 27337 28194 . - . ID=gene-AD11_RS23030;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=AD11_RS23030;old_locus_tag=AD11_4016 NZ_JJLL01000155.1 Protein Homology CDS 27337 28194 . - 0 ID=cds-WP_000842823.1;Parent=gene-AD11_RS23030;Dbxref=GenBank:WP_000842823.1;Name=WP_000842823.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418075.2;locus_tag=AD11_RS23030;product=protein YibB;protein_id=WP_000842823.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 28498 29430 . + . ID=gene-AD11_RS23035;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AD11_RS23035;old_locus_tag=AD11_4017 NZ_JJLL01000155.1 Protein Homology CDS 28498 29430 . + 0 ID=cds-WP_000587764.1;Parent=gene-AD11_RS23035;Dbxref=GenBank:WP_000587764.1;Name=WP_000587764.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AD11_RS23035;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587764.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 29440 30486 . + . ID=gene-AD11_RS23040;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AD11_RS23040;old_locus_tag=AD11_4018 NZ_JJLL01000155.1 Protein Homology CDS 29440 30486 . + 0 ID=cds-WP_000699219.1;Parent=gene-AD11_RS23040;Dbxref=GenBank:WP_000699219.1;Name=WP_000699219.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418077.1;locus_tag=AD11_RS23040;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699219.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 30490 31482 . + . ID=gene-AD11_RS23045;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AD11_RS23045;old_locus_tag=AD11_4019 NZ_JJLL01000155.1 Protein Homology CDS 30490 31482 . + 0 ID=cds-WP_001264586.1;Parent=gene-AD11_RS23045;Dbxref=GenBank:WP_001264586.1;Name=WP_001264586.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312526.1;locus_tag=AD11_RS23045;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_001264586.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 31479 32687 . + . ID=gene-AD11_RS23050;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=AD11_RS23050;old_locus_tag=AD11_4020 NZ_JJLL01000155.1 Protein Homology CDS 31479 32687 . + 0 ID=cds-WP_000204742.1;Parent=gene-AD11_RS23050;Dbxref=GenBank:WP_000204742.1;Name=WP_000204742.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312527.1;locus_tag=AD11_RS23050;product=O-antigen ligase RfaL;protein_id=WP_000204742.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 32723 33865 . - . ID=gene-AD11_RS23055;Name=AD11_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS23055;old_locus_tag=AD11_4021 NZ_JJLL01000155.1 Protein Homology CDS 32723 33865 . - 0 ID=cds-WP_033865828.1;Parent=gene-AD11_RS23055;Dbxref=GenBank:WP_033865828.1;Name=WP_033865828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312528.1;locus_tag=AD11_RS23055;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_033865828.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 33874 34887 . - . ID=gene-AD11_RS23060;Name=AD11_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS23060;old_locus_tag=AD11_4022 NZ_JJLL01000155.1 Protein Homology CDS 33874 34887 . - 0 ID=cds-WP_000346017.1;Parent=gene-AD11_RS23060;Dbxref=GenBank:WP_000346017.1;Name=WP_000346017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312529.1;locus_tag=AD11_RS23060;product=UDP-glucose--(galactosyl) LPS alpha1%2C2-glucosyltransferase;protein_id=WP_000346017.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 34912 35619 . - . ID=gene-AD11_RS23065;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AD11_RS23065;old_locus_tag=AD11_4023 NZ_JJLL01000155.1 Protein Homology CDS 34912 35619 . - 0 ID=cds-WP_000639946.1;Parent=gene-AD11_RS23065;Dbxref=GenBank:WP_000639946.1;Name=WP_000639946.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709405.1;locus_tag=AD11_RS23065;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000639946.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 35645 36652 . - . ID=gene-AD11_RS23070;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AD11_RS23070;old_locus_tag=AD11_4024 NZ_JJLL01000155.1 Protein Homology CDS 35645 36652 . - 0 ID=cds-WP_000080643.1;Parent=gene-AD11_RS23070;Dbxref=GenBank:WP_000080643.1;Name=WP_000080643.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457454.1;locus_tag=AD11_RS23070;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000080643.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 36695 37492 . - . ID=gene-AD11_RS23075;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AD11_RS23075;old_locus_tag=AD11_4025 NZ_JJLL01000155.1 Protein Homology CDS 36695 37492 . - 0 ID=cds-WP_001424421.1;Parent=gene-AD11_RS23075;Dbxref=GenBank:WP_001424421.1;Name=WP_001424421.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AD11_RS23075;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001424421.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 37485 38609 . - . ID=gene-AD11_RS23080;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=AD11_RS23080;old_locus_tag=AD11_4026 NZ_JJLL01000155.1 Protein Homology CDS 37485 38609 . - 0 ID=cds-WP_000634245.1;Parent=gene-AD11_RS23080;Dbxref=GenBank:WP_000634245.1;Name=WP_000634245.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=waaG;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AD11_RS23080;product=glycosyltransferase family 4 protein;protein_id=WP_000634245.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 38606 39664 . - . ID=gene-AD11_RS23085;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AD11_RS23085;old_locus_tag=AD11_4027 NZ_JJLL01000155.1 Protein Homology CDS 38606 39664 . - 0 ID=cds-WP_000360406.1;Parent=gene-AD11_RS23085;Dbxref=GenBank:WP_000360406.1;Name=WP_000360406.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AD11_RS23085;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_000360406.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 40077 41354 . + . ID=gene-AD11_RS23090;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AD11_RS23090;old_locus_tag=AD11_4028 NZ_JJLL01000155.1 Protein Homology CDS 40077 41354 . + 0 ID=cds-WP_000891564.1;Parent=gene-AD11_RS23090;Dbxref=GenBank:WP_000891564.1;Name=WP_000891564.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AD11_RS23090;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 41362 41841 . + . ID=gene-AD11_RS23095;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AD11_RS23095;old_locus_tag=AD11_4029 NZ_JJLL01000155.1 Protein Homology CDS 41362 41841 . + 0 ID=cds-WP_001171866.1;Parent=gene-AD11_RS23095;Dbxref=GenBank:WP_001171866.1;Name=WP_001171866.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AD11_RS23095;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171866.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 41880 42689 . - . ID=gene-AD11_RS23100;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AD11_RS23100;old_locus_tag=AD11_4030 NZ_JJLL01000155.1 Protein Homology CDS 41880 42689 . - 0 ID=cds-WP_001114543.1;Parent=gene-AD11_RS23100;Dbxref=GenBank:WP_001114543.1;Name=WP_001114543.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418092.1;locus_tag=AD11_RS23100;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114543.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 42787 42954 . - . ID=gene-AD11_RS23105;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AD11_RS23105;old_locus_tag=AD11_4031 NZ_JJLL01000155.1 Protein Homology CDS 42787 42954 . - 0 ID=cds-WP_001051798.1;Parent=gene-AD11_RS23105;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AD11_RS23105;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 42975 43211 . - . ID=gene-AD11_RS23110;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AD11_RS23110;old_locus_tag=AD11_4032 NZ_JJLL01000155.1 Protein Homology CDS 42975 43211 . - 0 ID=cds-WP_000091955.1;Parent=gene-AD11_RS23110;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AD11_RS23110;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 43428 44096 . - . ID=gene-AD11_RS23115;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AD11_RS23115;old_locus_tag=AD11_4033 NZ_JJLL01000155.1 Protein Homology CDS 43428 44096 . - 0 ID=cds-WP_001350561.1;Parent=gene-AD11_RS23115;Dbxref=GenBank:WP_001350561.1;Name=WP_001350561.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418095.4;locus_tag=AD11_RS23115;product=RadC family protein;protein_id=WP_001350561.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 44268 45488 . + . ID=gene-AD11_RS23120;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AD11_RS23120;old_locus_tag=AD11_4034 NZ_JJLL01000155.1 Protein Homology CDS 44268 45488 . + 0 ID=cds-WP_000050139.1;Parent=gene-AD11_RS23120;Dbxref=GenBank:WP_000050139.1;Name=WP_000050139.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AD11_RS23120;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050139.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 45466 45924 . + . ID=gene-AD11_RS23125;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AD11_RS23125;old_locus_tag=AD11_4035 NZ_JJLL01000155.1 Protein Homology CDS 45466 45924 . + 0 ID=cds-WP_000976073.1;Parent=gene-AD11_RS23125;Dbxref=GenBank:WP_000976073.1;Name=WP_000976073.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AD11_RS23125;product=dUTP diphosphatase;protein_id=WP_000976073.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 46031 46627 . + . ID=gene-AD11_RS23130;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AD11_RS23130;old_locus_tag=AD11_4036 NZ_JJLL01000155.1 Protein Homology CDS 46031 46627 . + 0 ID=cds-WP_000818601.1;Parent=gene-AD11_RS23130;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AD11_RS23130;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 46664 47305 . - . ID=gene-AD11_RS23135;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AD11_RS23135;old_locus_tag=AD11_4037 NZ_JJLL01000155.1 Protein Homology CDS 46664 47305 . - 0 ID=cds-WP_000806177.1;Parent=gene-AD11_RS23135;Dbxref=GenBank:WP_000806177.1;Name=WP_000806177.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AD11_RS23135;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 47371 48087 . - . ID=gene-AD11_RS23140;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AD11_RS23140;old_locus_tag=AD11_4038 NZ_JJLL01000155.1 Protein Homology CDS 47371 48087 . - 0 ID=cds-WP_001247097.1;Parent=gene-AD11_RS23140;Dbxref=GenBank:WP_001247097.1;Name=WP_001247097.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AD11_RS23140;product=ribonuclease PH;protein_id=WP_001247097.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 48214 49077 . + . ID=gene-AD11_RS23145;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AD11_RS23145;old_locus_tag=AD11_4039 NZ_JJLL01000155.1 Protein Homology CDS 48214 49077 . + 0 ID=cds-WP_000621340.1;Parent=gene-AD11_RS23145;Dbxref=GenBank:WP_000621340.1;Name=WP_000621340.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AD11_RS23145;product=YicC/YloC family endoribonuclease;protein_id=WP_000621340.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 49298 50122 . + . ID=gene-AD11_RS23150;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AD11_RS23150;old_locus_tag=AD11_4040 NZ_JJLL01000155.1 Protein Homology CDS 49298 50122 . + 0 ID=cds-WP_001350563.1;Parent=gene-AD11_RS23150;Dbxref=GenBank:WP_001350563.1;Name=WP_001350563.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418102.2;locus_tag=AD11_RS23150;product=DNA damage-inducible protein D;protein_id=WP_001350563.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 50413 51030 . + . ID=gene-AD11_RS23155;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AD11_RS23155;old_locus_tag=AD11_4041 NZ_JJLL01000155.1 Protein Homology CDS 50413 51030 . + 0 ID=cds-WP_000924289.1;Parent=gene-AD11_RS23155;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AD11_RS23155;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 51027 52709 . - . ID=gene-AD11_RS23160;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AD11_RS23160;old_locus_tag=AD11_4042 NZ_JJLL01000155.1 Protein Homology CDS 51027 52709 . - 0 ID=cds-WP_000870036.1;Parent=gene-AD11_RS23160;Dbxref=GenBank:WP_000870036.1;Name=WP_000870036.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418104.2;locus_tag=AD11_RS23160;product=NAD-dependent DNA ligase LigB;protein_id=WP_000870036.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 52967 53590 . + . ID=gene-AD11_RS23165;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AD11_RS23165;old_locus_tag=AD11_4043 NZ_JJLL01000155.1 Protein Homology CDS 52967 53590 . + 0 ID=cds-WP_001295237.1;Parent=gene-AD11_RS23165;Dbxref=GenBank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AD11_RS23165;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 53645 53920 . + . ID=gene-AD11_RS23170;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AD11_RS23170;old_locus_tag=AD11_4044 NZ_JJLL01000155.1 Protein Homology CDS 53645 53920 . + 0 ID=cds-WP_000135058.1;Parent=gene-AD11_RS23170;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AD11_RS23170;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 53939 56047 . + . ID=gene-AD11_RS23175;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AD11_RS23175;old_locus_tag=AD11_4045 NZ_JJLL01000155.1 Protein Homology CDS 53939 56047 . + 0 ID=cds-WP_000280488.1;Parent=gene-AD11_RS23175;Dbxref=GenBank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AD11_RS23175;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 56054 56743 . + . ID=gene-AD11_RS23180;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AD11_RS23180;old_locus_tag=AD11_4046 NZ_JJLL01000155.1 Protein Homology CDS 56054 56743 . + 0 ID=cds-WP_001070177.1;Parent=gene-AD11_RS23180;Dbxref=GenBank:WP_001070177.1;Name=WP_001070177.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AD11_RS23180;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 56749 58830 . + . ID=gene-AD11_RS23185;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AD11_RS23185;old_locus_tag=AD11_4047 NZ_JJLL01000155.1 Protein Homology CDS 56749 58830 . + 0 ID=cds-WP_000678419.1;Parent=gene-AD11_RS23185;Dbxref=GenBank:WP_000678419.1;Name=WP_000678419.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418109.1;locus_tag=AD11_RS23185;product=ATP-dependent DNA helicase RecG;protein_id=WP_000678419.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 58999 60204 . - . ID=gene-AD11_RS23190;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AD11_RS23190;old_locus_tag=AD11_4048 NZ_JJLL01000155.1 Protein Homology CDS 58999 60204 . - 0 ID=cds-WP_000468833.1;Parent=gene-AD11_RS23190;Dbxref=GenBank:WP_000468833.1;Name=WP_000468833.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418110.1;locus_tag=AD11_RS23190;product=sodium/glutamate symporter;protein_id=WP_000468833.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 60484 61875 . + . ID=gene-AD11_RS23195;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AD11_RS23195;old_locus_tag=AD11_4049 NZ_JJLL01000155.1 Protein Homology CDS 60484 61875 . + 0 ID=cds-WP_001295238.1;Parent=gene-AD11_RS23195;Dbxref=GenBank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AD11_RS23195;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 61996 63705 . + . ID=gene-AD11_RS23200;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AD11_RS23200;old_locus_tag=AD11_4050 NZ_JJLL01000155.1 Protein Homology CDS 61996 63705 . + 0 ID=cds-WP_033865829.1;Parent=gene-AD11_RS23200;Dbxref=GenBank:WP_033865829.1;Name=WP_033865829.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418112.1;locus_tag=AD11_RS23200;product=AsmA family protein;protein_id=WP_033865829.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 63758 66076 . - . ID=gene-AD11_RS23205;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AD11_RS23205;old_locus_tag=AD11_4051 NZ_JJLL01000155.1 Protein Homology CDS 63758 66076 . - 0 ID=cds-WP_000702898.1;Parent=gene-AD11_RS23205;Dbxref=GenBank:WP_000702898.1;Name=WP_000702898.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AD11_RS23205;product=alpha-xylosidase;protein_id=WP_000702898.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 66086 67468 . - . ID=gene-AD11_RS23210;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AD11_RS23210;old_locus_tag=AD11_4052 NZ_JJLL01000155.1 Protein Homology CDS 66086 67468 . - 0 ID=cds-WP_000834439.1;Parent=gene-AD11_RS23210;Dbxref=GenBank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AD11_RS23210;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 67761 67855 . + . ID=gene-AD11_RS23215;Name=AD11_RS23215;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS23215;old_locus_tag=AD11_4053 NZ_JJLL01000155.1 tRNAscan-SE tRNA 67761 67855 . + . ID=rna-AD11_RS23215;Parent=gene-AD11_RS23215;anticodon=(pos:67795..67797);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS23215;product=tRNA-Sec NZ_JJLL01000155.1 tRNAscan-SE exon 67761 67855 . + . ID=exon-AD11_RS23215-1;Parent=rna-AD11_RS23215;anticodon=(pos:67795..67797);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS23215;product=tRNA-Sec NZ_JJLL01000155.1 RefSeq pseudogene 67934 68095 . + . ID=gene-AD11_RS32760;Name=rhuM;end_range=68095,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AD11_RS32760;old_locus_tag=AD11_4054;partial=true;pseudo=true;start_range=.,67934 NZ_JJLL01000155.1 Protein Homology CDS 67934 68095 . + 0 ID=cds-AD11_RS32760;Parent=gene-AD11_RS32760;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=68095,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774140.1;locus_tag=AD11_RS32760;partial=true;product=RhuM family protein;pseudo=true;start_range=.,67934;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 68492 69676 . + . ID=gene-AD11_RS23225;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AD11_RS23225;old_locus_tag=AD11_4055 NZ_JJLL01000155.1 Protein Homology CDS 68492 69676 . + 0 ID=cds-WP_001172876.1;Parent=gene-AD11_RS23225;Dbxref=GenBank:WP_001172876.1;Name=WP_001172876.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AD11_RS23225;product=sugar efflux transporter;protein_id=WP_001172876.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 69787 70710 . + . ID=gene-AD11_RS23230;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AD11_RS23230;old_locus_tag=AD11_4056 NZ_JJLL01000155.1 Protein Homology CDS 69787 70710 . + 0 ID=cds-WP_000535963.1;Parent=gene-AD11_RS23230;Dbxref=GenBank:WP_000535963.1;Name=WP_000535963.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312621.1;locus_tag=AD11_RS23230;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535963.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 70714 71532 . - . ID=gene-AD11_RS23235;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AD11_RS23235;old_locus_tag=AD11_4057 NZ_JJLL01000155.1 Protein Homology CDS 70714 71532 . - 0 ID=cds-WP_001618963.1;Parent=gene-AD11_RS23235;Dbxref=GenBank:WP_001618963.1;Name=WP_001618963.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AD11_RS23235;product=lipoprotein NlpA;protein_id=WP_001618963.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 71754 72047 . + . ID=gene-AD11_RS23245;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=AD11_RS23245;old_locus_tag=AD11_4058 NZ_JJLL01000155.1 Protein Homology CDS 71754 72047 . + 0 ID=cds-WP_000805509.1;Parent=gene-AD11_RS23245;Dbxref=GenBank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AD11_RS23245;product=protein YicS;protein_id=WP_000805509.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 72088 73278 . - . ID=gene-AD11_RS23250;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=AD11_RS23250;old_locus_tag=AD11_4059 NZ_JJLL01000155.1 Protein Homology CDS 72088 73278 . - 0 ID=cds-WP_001288549.1;Parent=gene-AD11_RS23250;Dbxref=GenBank:WP_001288549.1;Name=WP_001288549.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AD11_RS23250;product=purine ribonucleoside efflux pump NepI;protein_id=WP_001288549.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 73489 73941 . - . ID=gene-AD11_RS23255;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=AD11_RS23255;old_locus_tag=AD11_4060 NZ_JJLL01000155.1 Protein Homology CDS 73489 73941 . - 0 ID=cds-WP_001295241.1;Parent=gene-AD11_RS23255;Dbxref=GenBank:WP_001295241.1;Name=WP_001295241.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AD11_RS23255;product=DUF1198 domain-containing protein;protein_id=WP_001295241.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 73994 75328 . - . ID=gene-AD11_RS23260;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=yicO;locus_tag=AD11_RS23260;old_locus_tag=AD11_4061 NZ_JJLL01000155.1 Protein Homology CDS 73994 75328 . - 0 ID=cds-WP_077747112.1;Parent=gene-AD11_RS23260;Dbxref=GenBank:WP_077747112.1;Name=WP_077747112.1;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AD11_RS23260;product=adenine permease AdeQ;protein_id=WP_077747112.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 75503 77269 . + . ID=gene-AD11_RS23265;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=AD11_RS23265;old_locus_tag=AD11_4062 NZ_JJLL01000155.1 Protein Homology CDS 75503 77269 . + 0 ID=cds-WP_001065695.1;Parent=gene-AD11_RS23265;Dbxref=GenBank:WP_001065695.1;Name=WP_001065695.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AD11_RS23265;product=adenine deaminase;protein_id=WP_001065695.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 77315 78706 . - . ID=gene-AD11_RS23270;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AD11_RS23270;old_locus_tag=AD11_4063 NZ_JJLL01000155.1 Protein Homology CDS 77315 78706 . - 0 ID=cds-WP_000879194.1;Parent=gene-AD11_RS23270;Dbxref=GenBank:WP_000879194.1;Name=WP_000879194.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AD11_RS23270;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879194.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 78844 80163 . - . ID=gene-AD11_RS23275;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AD11_RS23275;old_locus_tag=AD11_4064 NZ_JJLL01000155.1 Protein Homology CDS 78844 80163 . - 0 ID=cds-WP_033865832.1;Parent=gene-AD11_RS23275;Dbxref=GenBank:WP_033865832.1;Name=WP_033865832.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AD11_RS23275;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_033865832.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 80173 81675 . - . ID=gene-AD11_RS23280;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AD11_RS23280;old_locus_tag=AD11_4065 NZ_JJLL01000155.1 Protein Homology CDS 80173 81675 . - 0 ID=cds-WP_001295243.1;Parent=gene-AD11_RS23280;Dbxref=GenBank:WP_001295243.1;Name=WP_001295243.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AD11_RS23280;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001295243.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 81675 82265 . - . ID=gene-AD11_RS23285;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AD11_RS23285;old_locus_tag=AD11_4066 NZ_JJLL01000155.1 Protein Homology CDS 81675 82265 . - 0 ID=cds-WP_000633668.1;Parent=gene-AD11_RS23285;Dbxref=GenBank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AD11_RS23285;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 82341 82631 . - . ID=gene-AD11_RS23290;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AD11_RS23290;old_locus_tag=AD11_4067 NZ_JJLL01000155.1 Protein Homology CDS 82341 82631 . - 0 ID=cds-WP_001181708.1;Parent=gene-AD11_RS23290;Dbxref=GenBank:WP_001181708.1;Name=WP_001181708.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AD11_RS23290;product=acetolactate synthase small subunit;protein_id=WP_001181708.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 82635 84323 . - . ID=gene-AD11_RS23295;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AD11_RS23295;old_locus_tag=AD11_4068 NZ_JJLL01000155.1 Protein Homology CDS 82635 84323 . - 0 ID=cds-WP_000168474.1;Parent=gene-AD11_RS23295;Dbxref=GenBank:WP_000168474.1;Name=WP_000168474.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AD11_RS23295;product=acetolactate synthase large subunit;protein_id=WP_000168474.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 84429 84527 . - . ID=gene-AD11_RS23300;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AD11_RS23300 NZ_JJLL01000155.1 Protein Homology CDS 84429 84527 . - 0 ID=cds-WP_001300753.1;Parent=gene-AD11_RS23300;Dbxref=GenBank:WP_001300753.1;Name=WP_001300753.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AD11_RS23300;product=ilvB operon leader peptide IvbL;protein_id=WP_001300753.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 85093 85182 . + . ID=gene-AD11_RS23315;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AD11_RS23315 NZ_JJLL01000155.1 Protein Homology CDS 85093 85182 . + 0 ID=cds-WP_000060506.1;Parent=gene-AD11_RS23315;Dbxref=GenBank:WP_000060506.1;Name=WP_000060506.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1;locus_tag=AD11_RS23315;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000060506.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 85306 85380 . - . ID=gene-AD11_RS32765;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AD11_RS32765 NZ_JJLL01000155.1 Protein Homology CDS 85306 85380 . - 0 ID=cds-WP_211180519.1;Parent=gene-AD11_RS32765;Dbxref=GenBank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AD11_RS32765;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 85462 86646 . + . ID=gene-AD11_RS23320;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AD11_RS23320;old_locus_tag=AD11_4070 NZ_JJLL01000155.1 Protein Homology CDS 85462 86646 . + 0 ID=cds-WP_000828746.1;Parent=gene-AD11_RS23320;Dbxref=GenBank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AD11_RS23320;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 86654 87151 . - . ID=gene-AD11_RS23325;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AD11_RS23325;old_locus_tag=AD11_4071 NZ_JJLL01000155.1 Protein Homology CDS 86654 87151 . - 0 ID=cds-WP_000148061.1;Parent=gene-AD11_RS23325;Dbxref=GenBank:WP_000148061.1;Name=WP_000148061.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418130.1;locus_tag=AD11_RS23325;product=radical SAM protein;protein_id=WP_000148061.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 87148 87510 . - . ID=gene-AD11_RS23330;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AD11_RS23330;old_locus_tag=AD11_4072 NZ_JJLL01000155.1 Protein Homology CDS 87148 87510 . - 0 ID=cds-WP_001113432.1;Parent=gene-AD11_RS23330;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AD11_RS23330;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 87500 87847 . - . ID=gene-AD11_RS23335;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AD11_RS23335;old_locus_tag=AD11_4073 NZ_JJLL01000155.1 Protein Homology CDS 87500 87847 . - 0 ID=cds-WP_000703959.1;Parent=gene-AD11_RS23335;Dbxref=GenBank:WP_000703959.1;Name=WP_000703959.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AD11_RS23335;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 87955 88404 . + . ID=gene-AD11_RS23340;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=AD11_RS23340;old_locus_tag=AD11_4074 NZ_JJLL01000155.1 Protein Homology CDS 87955 88404 . + 0 ID=cds-WP_000511289.1;Parent=gene-AD11_RS23340;Dbxref=GenBank:WP_000511289.1;Name=WP_000511289.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=AD11_RS23340;product=protein YidI;protein_id=WP_000511289.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 88451 89944 . - . ID=gene-AD11_RS23345;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=AD11_RS23345;old_locus_tag=AD11_4075 NZ_JJLL01000155.1 Protein Homology CDS 88451 89944 . - 0 ID=cds-WP_000828527.1;Parent=gene-AD11_RS23345;Dbxref=GenBank:WP_000828527.1;Name=WP_000828527.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AD11_RS23345;product=sulfatase-like hydrolase/transferase;protein_id=WP_000828527.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 89941 91656 . - . ID=gene-AD11_RS23350;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=AD11_RS23350;old_locus_tag=AD11_4076 NZ_JJLL01000155.1 Protein Homology CDS 89941 91656 . - 0 ID=cds-WP_001087145.1;Parent=gene-AD11_RS23350;Dbxref=GenBank:WP_001087145.1;Name=WP_001087145.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=AD11_RS23350;product=solute:sodium symporter family transporter;protein_id=WP_001087145.1;transl_table=11 NZ_JJLL01000155.1 RefSeq gene 91823 92716 . + . ID=gene-AD11_RS23355;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=AD11_RS23355;old_locus_tag=AD11_4077 NZ_JJLL01000155.1 Protein Homology CDS 91823 92716 . + 0 ID=cds-WP_001013540.1;Parent=gene-AD11_RS23355;Dbxref=GenBank:WP_001013540.1;Name=WP_001013540.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yidL;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AD11_RS23355;product=helix-turn-helix transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_JJLL01000155.1 RefSeq pseudogene 92713 93527 . - . ID=gene-AD11_RS23360;Name=AD11_RS23360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS23360;old_locus_tag=AD11_4079;pseudo=true NZ_JJLL01000155.1 Protein Homology CDS 92713 93527 . - 0 ID=cds-AD11_RS23360;Parent=gene-AD11_RS23360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015343942.1;locus_tag=AD11_RS23360;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000155.1 RefSeq pseudogene 93527 94300 . - . ID=gene-AD11_RS23365;Name=AD11_RS23365;end_range=94300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS23365;old_locus_tag=AD11_4080;partial=true;pseudo=true NZ_JJLL01000155.1 Protein Homology CDS 93527 94300 . - 0 ID=cds-AD11_RS23365;Parent=gene-AD11_RS23365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=94300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AD11_RS23365;partial=true;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 NZ_JJLL01000155.1 RefSeq pseudogene 94318 94659 . - . ID=gene-AD11_RS23370;Name=AD11_RS23370;end_range=94659,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS23370;old_locus_tag=AD11_4081;partial=true;pseudo=true NZ_JJLL01000155.1 Protein Homology CDS 94318 94659 . - 0 ID=cds-AD11_RS23370;Parent=gene-AD11_RS23370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=94659,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS23370;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLL01000156.1 1 78720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000156.1 RefSeq region 1 78720 . + . ID=NZ_JJLL01000156.1:1..78720;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000156.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS23375;Name=AD11_RS23375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS23375;old_locus_tag=AD11_4082;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000156.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS23375;Parent=gene-AD11_RS23375;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS23375;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000156.1 RefSeq pseudogene 639 1301 . - . ID=gene-AD11_RS23380;Name=AD11_RS23380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS23380;old_locus_tag=AD11_4083;partial=true;pseudo=true;start_range=.,639 NZ_JJLL01000156.1 Protein Homology CDS 639 1301 . - 0 ID=cds-AD11_RS23380;Parent=gene-AD11_RS23380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AD11_RS23380;partial=true;product=PTS transporter subunit EIIC;pseudo=true;start_range=.,639;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 1597 2313 . + . ID=gene-AD11_RS23385;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=AD11_RS23385;old_locus_tag=AD11_4084 NZ_JJLL01000156.1 Protein Homology CDS 1597 2313 . + 0 ID=cds-WP_001300779.1;Parent=gene-AD11_RS23385;Dbxref=GenBank:WP_001300779.1;Name=WP_001300779.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yidP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AD11_RS23385;product=GntR family transcriptional regulator;protein_id=WP_001300779.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 2310 3971 . - . ID=gene-AD11_RS23390;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AD11_RS23390;old_locus_tag=AD11_4085 NZ_JJLL01000156.1 Protein Homology CDS 2310 3971 . - 0 ID=cds-WP_001279752.1;Parent=gene-AD11_RS23390;Dbxref=GenBank:WP_001279752.1;Name=WP_001279752.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AD11_RS23390;product=putative transporter;protein_id=WP_001279752.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 4167 4595 . - . ID=gene-AD11_RS23395;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AD11_RS23395;old_locus_tag=AD11_4086 NZ_JJLL01000156.1 Protein Homology CDS 4167 4595 . - 0 ID=cds-WP_001243431.1;Parent=gene-AD11_RS23395;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AD11_RS23395;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 4707 5120 . - . ID=gene-AD11_RS23400;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AD11_RS23400;old_locus_tag=AD11_4087 NZ_JJLL01000156.1 Protein Homology CDS 4707 5120 . - 0 ID=cds-WP_001243437.1;Parent=gene-AD11_RS23400;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AD11_RS23400;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JJLL01000156.1 cmsearch sequence_feature 5114 5186 . - . ID=id-NZ_JJLL01000156.1:5114..5186;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLL01000156.1 RefSeq gene 5426 5758 . + . ID=gene-AD11_RS23405;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AD11_RS23405;old_locus_tag=AD11_4088 NZ_JJLL01000156.1 Protein Homology CDS 5426 5758 . + 0 ID=cds-WP_000620888.1;Parent=gene-AD11_RS23405;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AD11_RS23405;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 5760 6974 . - . ID=gene-AD11_RS23410;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AD11_RS23410;old_locus_tag=AD11_4089 NZ_JJLL01000156.1 Protein Homology CDS 5760 6974 . - 0 ID=cds-WP_001460146.1;Parent=gene-AD11_RS23410;Dbxref=GenBank:WP_001460146.1;Name=WP_001460146.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AD11_RS23410;product=DUF3748 domain-containing protein;protein_id=WP_001460146.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 7075 8139 . + . ID=gene-AD11_RS23415;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AD11_RS23415;old_locus_tag=AD11_4090 NZ_JJLL01000156.1 Protein Homology CDS 7075 8139 . + 0 ID=cds-WP_001460147.1;Parent=gene-AD11_RS23415;Dbxref=GenBank:WP_001460147.1;Name=WP_001460147.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AD11_RS23415;product=colicin M resistance lipid reductase CbrA;protein_id=WP_001460147.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 8136 9473 . - . ID=gene-AD11_RS23420;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=AD11_RS23420;old_locus_tag=AD11_4091 NZ_JJLL01000156.1 Protein Homology CDS 8136 9473 . - 0 ID=cds-WP_187439462.1;Parent=gene-AD11_RS23420;Dbxref=GenBank:WP_187439462.1;Name=WP_187439462.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=dgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AD11_RS23420;product=MFS transporter;protein_id=WP_187439462.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 9548 10696 . - . ID=gene-AD11_RS23425;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AD11_RS23425;old_locus_tag=AD11_4092 NZ_JJLL01000156.1 Protein Homology CDS 9548 10696 . - 0 ID=cds-WP_000705012.1;Parent=gene-AD11_RS23425;Dbxref=GenBank:WP_000705012.1;Name=WP_000705012.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AD11_RS23425;product=galactonate dehydratase;protein_id=WP_000705012.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 10693 11310 . - . ID=gene-AD11_RS23430;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=AD11_RS23430;old_locus_tag=AD11_4093 NZ_JJLL01000156.1 Protein Homology CDS 10693 11310 . - 0 ID=cds-WP_001198699.1;Parent=gene-AD11_RS23430;Dbxref=GenBank:WP_001198699.1;Name=WP_001198699.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AD11_RS23430;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198699.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 11294 12172 . - . ID=gene-AD11_RS23435;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=AD11_RS23435;old_locus_tag=AD11_4094 NZ_JJLL01000156.1 Protein Homology CDS 11294 12172 . - 0 ID=cds-WP_000127112.1;Parent=gene-AD11_RS23435;Dbxref=GenBank:WP_000127112.1;Name=WP_000127112.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709506.1;locus_tag=AD11_RS23435;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127112.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 12169 12858 . - . ID=gene-AD11_RS23440;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AD11_RS23440;old_locus_tag=AD11_4095 NZ_JJLL01000156.1 Protein Homology CDS 12169 12858 . - 0 ID=cds-WP_000174305.1;Parent=gene-AD11_RS23440;Dbxref=GenBank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AD11_RS23440;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 13136 13792 . + . ID=gene-AD11_RS23445;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AD11_RS23445;old_locus_tag=AD11_4096 NZ_JJLL01000156.1 Protein Homology CDS 13136 13792 . + 0 ID=cds-WP_000772934.1;Parent=gene-AD11_RS23445;Dbxref=GenBank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AD11_RS23445;product=protein YidX;protein_id=WP_000772934.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 13838 14650 . - . ID=gene-AD11_RS23450;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AD11_RS23450;old_locus_tag=AD11_4097 NZ_JJLL01000156.1 Protein Homology CDS 13838 14650 . - 0 ID=cds-WP_000985549.1;Parent=gene-AD11_RS23450;Dbxref=GenBank:WP_000985549.1;Name=WP_000985549.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AD11_RS23450;product=sugar-phosphatase;protein_id=WP_000985549.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 14765 15163 . - . ID=gene-AD11_RS23455;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=AD11_RS23455;old_locus_tag=AD11_4098 NZ_JJLL01000156.1 Protein Homology CDS 14765 15163 . - 0 ID=cds-WP_000522208.1;Parent=gene-AD11_RS23455;Dbxref=GenBank:WP_000522208.1;Name=WP_000522208.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AD11_RS23455;product=YidB family protein;protein_id=WP_000522208.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 15403 17817 . - . ID=gene-AD11_RS23465;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AD11_RS23465;old_locus_tag=AD11_4099 NZ_JJLL01000156.1 Protein Homology CDS 15403 17817 . - 0 ID=cds-WP_000072067.1;Parent=gene-AD11_RS23465;Dbxref=GenBank:WP_000072067.1;Name=WP_000072067.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AD11_RS23465;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_000072067.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 17846 18919 . - . ID=gene-AD11_RS23470;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AD11_RS23470;old_locus_tag=AD11_4100 NZ_JJLL01000156.1 Protein Homology CDS 17846 18919 . - 0 ID=cds-WP_000060112.1;Parent=gene-AD11_RS23470;Dbxref=GenBank:WP_000060112.1;Name=WP_000060112.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AD11_RS23470;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 18919 20019 . - . ID=gene-AD11_RS23475;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AD11_RS23475;old_locus_tag=AD11_4101 NZ_JJLL01000156.1 Protein Homology CDS 18919 20019 . - 0 ID=cds-WP_001431154.1;Parent=gene-AD11_RS23475;Dbxref=GenBank:WP_001431154.1;Name=WP_001431154.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AD11_RS23475;product=DNA polymerase III subunit beta;protein_id=WP_001431154.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 20024 21427 . - . ID=gene-AD11_RS23480;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AD11_RS23480;old_locus_tag=AD11_4102 NZ_JJLL01000156.1 Protein Homology CDS 20024 21427 . - 0 ID=cds-WP_000059111.1;Parent=gene-AD11_RS23480;Dbxref=GenBank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AD11_RS23480;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 21724 21804 . + . ID=gene-AD11_RS31785;Name=AD11_RS31785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31785 NZ_JJLL01000156.1 Protein Homology CDS 21724 21804 . + 0 ID=cds-WP_120795392.1;Parent=gene-AD11_RS31785;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AD11_RS31785;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 22034 22174 . + . ID=gene-AD11_RS23485;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AD11_RS23485;old_locus_tag=AD11_4103 NZ_JJLL01000156.1 Protein Homology CDS 22034 22174 . + 0 ID=cds-WP_000831330.1;Parent=gene-AD11_RS23485;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AD11_RS23485;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 22191 22550 . + . ID=gene-AD11_RS23490;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AD11_RS23490;old_locus_tag=AD11_4104 NZ_JJLL01000156.1 Protein Homology CDS 22191 22550 . + 0 ID=cds-WP_000239730.1;Parent=gene-AD11_RS23490;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AD11_RS23490;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 22514 22771 . + . ID=gene-AD11_RS23495;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AD11_RS23495 NZ_JJLL01000156.1 Protein Homology CDS 22514 22771 . + 0 ID=cds-WP_001307474.1;Parent=gene-AD11_RS23495;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AD11_RS23495;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 22774 24420 . + . ID=gene-AD11_RS23500;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AD11_RS23500;old_locus_tag=AD11_4105 NZ_JJLL01000156.1 Protein Homology CDS 22774 24420 . + 0 ID=cds-WP_033865839.1;Parent=gene-AD11_RS23500;Dbxref=GenBank:WP_033865839.1;Name=WP_033865839.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418161.1;locus_tag=AD11_RS23500;product=membrane protein insertase YidC;protein_id=WP_033865839.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 24526 25890 . + . ID=gene-AD11_RS23505;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AD11_RS23505;old_locus_tag=AD11_4106 NZ_JJLL01000156.1 Protein Homology CDS 24526 25890 . + 0 ID=cds-WP_001282346.1;Parent=gene-AD11_RS23505;Dbxref=GenBank:WP_001282346.1;Name=WP_001282346.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AD11_RS23505;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001282346.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 26133 26207 . + . ID=gene-AD11_RS23510;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AD11_RS23510 NZ_JJLL01000156.1 Protein Homology CDS 26133 26207 . + 0 ID=cds-WP_001364348.1;Parent=gene-AD11_RS23510;Dbxref=GenBank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AD11_RS23510;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 26428 27843 . + . ID=gene-AD11_RS23515;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AD11_RS23515;old_locus_tag=AD11_4107 NZ_JJLL01000156.1 Protein Homology CDS 26428 27843 . + 0 ID=cds-WP_001295247.1;Parent=gene-AD11_RS23515;Dbxref=GenBank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AD11_RS23515;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 27934 29181 . + . ID=gene-AD11_RS23520;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AD11_RS23520;old_locus_tag=AD11_4108 NZ_JJLL01000156.1 Protein Homology CDS 27934 29181 . + 0 ID=cds-WP_000131925.1;Parent=gene-AD11_RS23520;Dbxref=GenBank:WP_000131925.1;Name=WP_000131925.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418165.1;locus_tag=AD11_RS23520;product=low affinity tryptophan permease TnaB;protein_id=WP_000131925.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 29313 30488 . + . ID=gene-AD11_RS23525;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AD11_RS23525;old_locus_tag=AD11_4109 NZ_JJLL01000156.1 Protein Homology CDS 29313 30488 . + 0 ID=cds-WP_000085982.1;Parent=gene-AD11_RS23525;Dbxref=GenBank:WP_000085982.1;Name=WP_000085982.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AD11_RS23525;product=multidrug efflux MFS transporter MdtL;protein_id=WP_000085982.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 30463 31422 . + . ID=gene-AD11_RS23530;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AD11_RS23530;old_locus_tag=AD11_4110 NZ_JJLL01000156.1 Protein Homology CDS 30463 31422 . + 0 ID=cds-WP_001311238.1;Parent=gene-AD11_RS23530;Dbxref=GenBank:WP_001311238.1;Name=WP_001311238.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418167.1;locus_tag=AD11_RS23530;product=HTH-type transcriptional regulator YidZ;protein_id=WP_001311238.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 31579 32328 . + . ID=gene-AD11_RS23535;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AD11_RS23535;old_locus_tag=AD11_4111 NZ_JJLL01000156.1 Protein Homology CDS 31579 32328 . + 0 ID=cds-WP_001618966.1;Parent=gene-AD11_RS23535;Dbxref=GenBank:WP_001618966.1;Name=WP_001618966.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AD11_RS23535;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_001618966.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 32350 32916 . + . ID=gene-AD11_RS23540;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=AD11_RS23540;old_locus_tag=AD11_4112 NZ_JJLL01000156.1 Protein Homology CDS 32350 32916 . + 0 ID=cds-WP_033865841.1;Parent=gene-AD11_RS23540;Dbxref=GenBank:WP_033865841.1;Name=WP_033865841.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AD11_RS23540;product=class I chromate reductase YieF;protein_id=WP_033865841.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 32970 34307 . - . ID=gene-AD11_RS23545;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AD11_RS23545;old_locus_tag=AD11_4113 NZ_JJLL01000156.1 Protein Homology CDS 32970 34307 . - 0 ID=cds-WP_000082693.1;Parent=gene-AD11_RS23545;Dbxref=GenBank:WP_000082693.1;Name=WP_000082693.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=AD11_RS23545;product=adenine permease AdeP;protein_id=WP_000082693.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 34474 35139 . + . ID=gene-AD11_RS23550;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AD11_RS23550;old_locus_tag=AD11_4114 NZ_JJLL01000156.1 Protein Homology CDS 34474 35139 . + 0 ID=cds-WP_000078072.1;Parent=gene-AD11_RS23550;Dbxref=GenBank:WP_000078072.1;Name=WP_000078072.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AD11_RS23550;product=6-phosphogluconate phosphatase;protein_id=WP_000078072.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 35206 35679 . + . ID=gene-AD11_RS23555;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;locus_tag=AD11_RS23555;old_locus_tag=AD11_4115 NZ_JJLL01000156.1 Protein Homology CDS 35206 35679 . + 0 ID=cds-WP_000116770.1;Parent=gene-AD11_RS23555;Dbxref=GenBank:WP_000116770.1;Name=WP_000116770.1;gbkey=CDS;gene=cbrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=AD11_RS23555;product=protein CbrB;protein_id=WP_000116770.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 35756 36472 . - . ID=gene-AD11_RS23560;Name=yieK;gbkey=Gene;gene=yieK;gene_biotype=protein_coding;locus_tag=AD11_RS23560;old_locus_tag=AD11_4116 NZ_JJLL01000156.1 Protein Homology CDS 35756 36472 . - 0 ID=cds-WP_000766897.1;Parent=gene-AD11_RS23560;Dbxref=GenBank:WP_000766897.1;Name=WP_000766897.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=yieK;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001384841.1;locus_tag=AD11_RS23560;product=glucosamine-6-phosphate deaminase;protein_id=WP_000766897.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 36487 37656 . - . ID=gene-AD11_RS23565;Name=yieL;gbkey=Gene;gene=yieL;gene_biotype=protein_coding;locus_tag=AD11_RS23565;old_locus_tag=AD11_4117 NZ_JJLL01000156.1 Protein Homology CDS 36487 37656 . - 0 ID=cds-WP_001556329.1;Parent=gene-AD11_RS23565;Dbxref=GenBank:WP_001556329.1;Name=WP_001556329.1;gbkey=CDS;gene=yieL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418175.3;locus_tag=AD11_RS23565;product=esterase;protein_id=WP_001556329.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 37683 39299 . - . ID=gene-AD11_RS23570;Name=bglH;gbkey=Gene;gene=bglH;gene_biotype=protein_coding;locus_tag=AD11_RS23570;old_locus_tag=AD11_4118 NZ_JJLL01000156.1 Protein Homology CDS 37683 39299 . - 0 ID=cds-WP_000489881.1;Parent=gene-AD11_RS23570;Dbxref=GenBank:WP_000489881.1;Name=WP_000489881.1;gbkey=CDS;gene=bglH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418176.1;locus_tag=AD11_RS23570;product=carbohydrate-specific porin BglH;protein_id=WP_000489881.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 39368 40780 . - . ID=gene-AD11_RS23575;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=AD11_RS23575;old_locus_tag=AD11_4119 NZ_JJLL01000156.1 Protein Homology CDS 39368 40780 . - 0 ID=cds-WP_001618968.1;Parent=gene-AD11_RS23575;Dbxref=GenBank:WP_001618968.1;Name=WP_001618968.1;gbkey=CDS;gene=bglB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418177.1;locus_tag=AD11_RS23575;product=6-phospho-beta-glucosidase BglB;protein_id=WP_001618968.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 40799 42676 . - . ID=gene-AD11_RS23580;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=AD11_RS23580;old_locus_tag=AD11_4120 NZ_JJLL01000156.1 Protein Homology CDS 40799 42676 . - 0 ID=cds-WP_001618969.1;Parent=gene-AD11_RS23580;Dbxref=GenBank:WP_001618969.1;Name=WP_001618969.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=AD11_RS23580;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_001618969.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 42810 43646 . - . ID=gene-AD11_RS23585;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=AD11_RS23585;old_locus_tag=AD11_4121 NZ_JJLL01000156.1 Protein Homology CDS 42810 43646 . - 0 ID=cds-WP_001295251.1;Parent=gene-AD11_RS23585;Dbxref=GenBank:WP_001295251.1;Name=WP_001295251.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=AD11_RS23585;product=transcriptional antiterminator BglG;protein_id=WP_001295251.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 43932 44657 . - . ID=gene-AD11_RS23590;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AD11_RS23590;old_locus_tag=AD11_4123 NZ_JJLL01000156.1 Protein Homology CDS 43932 44657 . - 0 ID=cds-WP_000377786.1;Parent=gene-AD11_RS23590;Dbxref=GenBank:WP_000377786.1;Name=WP_000377786.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AD11_RS23590;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 44672 45445 . - . ID=gene-AD11_RS23595;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AD11_RS23595;old_locus_tag=AD11_4124 NZ_JJLL01000156.1 Protein Homology CDS 44672 45445 . - 0 ID=cds-WP_000063125.1;Parent=gene-AD11_RS23595;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AD11_RS23595;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 45628 46518 . - . ID=gene-AD11_RS23600;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AD11_RS23600;old_locus_tag=AD11_4125 NZ_JJLL01000156.1 Protein Homology CDS 45628 46518 . - 0 ID=cds-WP_032181515.1;Parent=gene-AD11_RS23600;Dbxref=GenBank:WP_032181515.1;Name=WP_032181515.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AD11_RS23600;product=phosphate ABC transporter permease PstA;protein_id=WP_032181515.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 46518 47477 . - . ID=gene-AD11_RS23605;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AD11_RS23605;old_locus_tag=AD11_4126 NZ_JJLL01000156.1 Protein Homology CDS 46518 47477 . - 0 ID=cds-WP_000741620.1;Parent=gene-AD11_RS23605;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AD11_RS23605;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 47564 48604 . - . ID=gene-AD11_RS23610;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AD11_RS23610;old_locus_tag=AD11_4127 NZ_JJLL01000156.1 Protein Homology CDS 47564 48604 . - 0 ID=cds-WP_000867146.1;Parent=gene-AD11_RS23610;Dbxref=GenBank:WP_000867146.1;Name=WP_000867146.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AD11_RS23610;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 48918 50747 . - . ID=gene-AD11_RS23615;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AD11_RS23615;old_locus_tag=AD11_4128 NZ_JJLL01000156.1 Protein Homology CDS 48918 50747 . - 0 ID=cds-WP_033865846.1;Parent=gene-AD11_RS23615;Dbxref=GenBank:WP_033865846.1;Name=WP_033865846.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AD11_RS23615;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_033865846.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 50909 52279 . - . ID=gene-AD11_RS23620;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AD11_RS23620;old_locus_tag=AD11_4129 NZ_JJLL01000156.1 Protein Homology CDS 50909 52279 . - 0 ID=cds-WP_000933736.1;Parent=gene-AD11_RS23620;Dbxref=GenBank:WP_000933736.1;Name=WP_000933736.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AD11_RS23620;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_000933736.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 52632 53051 . - . ID=gene-AD11_RS23625;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AD11_RS23625;old_locus_tag=AD11_4130 NZ_JJLL01000156.1 Protein Homology CDS 52632 53051 . - 0 ID=cds-WP_001251965.1;Parent=gene-AD11_RS23625;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AD11_RS23625;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 53072 54454 . - . ID=gene-AD11_RS23630;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AD11_RS23630;old_locus_tag=AD11_4131 NZ_JJLL01000156.1 Protein Homology CDS 53072 54454 . - 0 ID=cds-WP_000190506.1;Parent=gene-AD11_RS23630;Dbxref=GenBank:WP_000190506.1;Name=WP_000190506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AD11_RS23630;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 54481 55344 . - . ID=gene-AD11_RS23635;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AD11_RS23635;old_locus_tag=AD11_4132 NZ_JJLL01000156.1 Protein Homology CDS 54481 55344 . - 0 ID=cds-WP_000896498.1;Parent=gene-AD11_RS23635;Dbxref=GenBank:WP_000896498.1;Name=WP_000896498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AD11_RS23635;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 55395 56936 . - . ID=gene-AD11_RS23640;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AD11_RS23640;old_locus_tag=AD11_4133 NZ_JJLL01000156.1 Protein Homology CDS 55395 56936 . - 0 ID=cds-WP_001176745.1;Parent=gene-AD11_RS23640;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AD11_RS23640;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 56949 57482 . - . ID=gene-AD11_RS23645;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AD11_RS23645;old_locus_tag=AD11_4134 NZ_JJLL01000156.1 Protein Homology CDS 56949 57482 . - 0 ID=cds-WP_001288587.1;Parent=gene-AD11_RS23645;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AD11_RS23645;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 57497 57967 . - . ID=gene-AD11_RS23650;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AD11_RS23650;old_locus_tag=AD11_4135 NZ_JJLL01000156.1 Protein Homology CDS 57497 57967 . - 0 ID=cds-WP_001052219.1;Parent=gene-AD11_RS23650;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AD11_RS23650;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 58029 58268 . - . ID=gene-AD11_RS23655;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AD11_RS23655;old_locus_tag=AD11_4136 NZ_JJLL01000156.1 Protein Homology CDS 58029 58268 . - 0 ID=cds-WP_000429386.1;Parent=gene-AD11_RS23655;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AD11_RS23655;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 58315 59130 . - . ID=gene-AD11_RS23660;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AD11_RS23660;old_locus_tag=AD11_4137 NZ_JJLL01000156.1 Protein Homology CDS 58315 59130 . - 0 ID=cds-WP_000135625.1;Parent=gene-AD11_RS23660;Dbxref=GenBank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AD11_RS23660;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 59139 59519 . - . ID=gene-AD11_RS23665;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AD11_RS23665 NZ_JJLL01000156.1 Protein Homology CDS 59139 59519 . - 0 ID=cds-WP_000116695.1;Parent=gene-AD11_RS23665;Dbxref=GenBank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AD11_RS23665;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 60136 60759 . - . ID=gene-AD11_RS23670;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AD11_RS23670;old_locus_tag=AD11_4139 NZ_JJLL01000156.1 Protein Homology CDS 60136 60759 . - 0 ID=cds-WP_000932839.1;Parent=gene-AD11_RS23670;Dbxref=GenBank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AD11_RS23670;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 60823 62712 . - . ID=gene-AD11_RS23675;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AD11_RS23675;old_locus_tag=AD11_4140 NZ_JJLL01000156.1 Protein Homology CDS 60823 62712 . - 0 ID=cds-WP_000499788.1;Parent=gene-AD11_RS23675;Dbxref=GenBank:WP_000499788.1;Name=WP_000499788.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AD11_RS23675;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_000499788.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 63091 63534 . - . ID=gene-AD11_RS23680;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AD11_RS23680;old_locus_tag=AD11_4141 NZ_JJLL01000156.1 Protein Homology CDS 63091 63534 . - 0 ID=cds-WP_000763723.1;Parent=gene-AD11_RS23680;Dbxref=GenBank:WP_000763723.1;Name=WP_000763723.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=AD11_RS23680;product=FMN-binding protein MioC;protein_id=WP_000763723.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 63624 64082 . - . ID=gene-AD11_RS23685;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AD11_RS23685;old_locus_tag=AD11_4142 NZ_JJLL01000156.1 Protein Homology CDS 63624 64082 . - 0 ID=cds-WP_000432970.1;Parent=gene-AD11_RS23685;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AD11_RS23685;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 64234 65226 . + . ID=gene-AD11_RS23690;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AD11_RS23690;old_locus_tag=AD11_4143 NZ_JJLL01000156.1 Protein Homology CDS 64234 65226 . + 0 ID=cds-WP_000845113.1;Parent=gene-AD11_RS23690;Dbxref=GenBank:WP_000845113.1;Name=WP_000845113.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312713.1;locus_tag=AD11_RS23690;product=aspartate--ammonia ligase;protein_id=WP_000845113.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 65231 66682 . - . ID=gene-AD11_RS23695;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AD11_RS23695;old_locus_tag=AD11_4144 NZ_JJLL01000156.1 Protein Homology CDS 65231 66682 . - 0 ID=cds-WP_033865847.1;Parent=gene-AD11_RS23695;Dbxref=GenBank:WP_033865847.1;Name=WP_033865847.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AD11_RS23695;product=ATPase RavA stimulator ViaA;protein_id=WP_033865847.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 66676 68172 . - . ID=gene-AD11_RS23700;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AD11_RS23700;old_locus_tag=AD11_4145 NZ_JJLL01000156.1 Protein Homology CDS 66676 68172 . - 0 ID=cds-WP_001299914.1;Parent=gene-AD11_RS23700;Dbxref=GenBank:WP_001299914.1;Name=WP_001299914.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AD11_RS23700;product=ATPase RavA;protein_id=WP_001299914.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 68395 70263 . + . ID=gene-AD11_RS23705;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AD11_RS23705;old_locus_tag=AD11_4146 NZ_JJLL01000156.1 Protein Homology CDS 68395 70263 . + 0 ID=cds-WP_000102319.1;Parent=gene-AD11_RS23705;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AD11_RS23705;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 70430 70849 . + . ID=gene-AD11_RS23710;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AD11_RS23710;old_locus_tag=AD11_4147 NZ_JJLL01000156.1 Protein Homology CDS 70430 70849 . + 0 ID=cds-WP_001301979.1;Parent=gene-AD11_RS23710;Dbxref=GenBank:WP_001301979.1;Name=WP_001301979.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312717.1;locus_tag=AD11_RS23710;product=D-ribose pyranase;protein_id=WP_001301979.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 70857 72362 . + . ID=gene-AD11_RS23715;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AD11_RS23715;old_locus_tag=AD11_4148 NZ_JJLL01000156.1 Protein Homology CDS 70857 72362 . + 0 ID=cds-WP_000387770.1;Parent=gene-AD11_RS23715;Dbxref=GenBank:WP_000387770.1;Name=WP_000387770.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AD11_RS23715;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000387770.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 72367 73332 . + . ID=gene-AD11_RS23720;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AD11_RS23720;old_locus_tag=AD11_4149 NZ_JJLL01000156.1 Protein Homology CDS 72367 73332 . + 0 ID=cds-WP_000211858.1;Parent=gene-AD11_RS23720;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AD11_RS23720;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 73357 74247 . + . ID=gene-AD11_RS23725;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AD11_RS23725;old_locus_tag=AD11_4150 NZ_JJLL01000156.1 Protein Homology CDS 73357 74247 . + 0 ID=cds-WP_001056273.1;Parent=gene-AD11_RS23725;Dbxref=GenBank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AD11_RS23725;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 74373 75302 . + . ID=gene-AD11_RS23730;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AD11_RS23730;old_locus_tag=AD11_4151 NZ_JJLL01000156.1 Protein Homology CDS 74373 75302 . + 0 ID=cds-WP_001300603.1;Parent=gene-AD11_RS23730;Dbxref=GenBank:WP_001300603.1;Name=WP_001300603.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AD11_RS23730;product=ribokinase;protein_id=WP_001300603.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 75306 76298 . + . ID=gene-AD11_RS23735;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AD11_RS23735;old_locus_tag=AD11_4152 NZ_JJLL01000156.1 Protein Homology CDS 75306 76298 . + 0 ID=cds-WP_000224470.1;Parent=gene-AD11_RS23735;Dbxref=GenBank:WP_000224470.1;Name=WP_000224470.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AD11_RS23735;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224470.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 76264 77691 . - . ID=gene-AD11_RS23740;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AD11_RS23740;old_locus_tag=AD11_4153 NZ_JJLL01000156.1 Protein Homology CDS 76264 77691 . - 0 ID=cds-WP_001280852.1;Parent=gene-AD11_RS23740;Dbxref=GenBank:WP_001280852.1;Name=WP_001280852.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AD11_RS23740;product=multidrug transporter subunit MdtD;protein_id=WP_001280852.1;transl_table=11 NZ_JJLL01000156.1 RefSeq gene 77714 78406 . - . ID=gene-AD11_RS23745;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AD11_RS23745;old_locus_tag=AD11_4154 NZ_JJLL01000156.1 Protein Homology CDS 77714 78406 . - 0 ID=cds-WP_001131164.1;Parent=gene-AD11_RS23745;Dbxref=GenBank:WP_001131164.1;Name=WP_001131164.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AD11_RS23745;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131164.1;transl_table=11 ##sequence-region NZ_JJLL01000157.1 1 42941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000157.1 RefSeq region 1 42941 . + . ID=NZ_JJLL01000157.1:1..42941;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000157.1 RefSeq gene 1 588 . + . ID=gene-AD11_RS23750;Name=AD11_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS23750;old_locus_tag=AD11_4155;partial=true;start_range=.,1 NZ_JJLL01000157.1 Protein Homology CDS 1 588 . + 0 ID=cds-WP_019842912.1;Parent=gene-AD11_RS23750;Dbxref=GenBank:WP_019842912.1;Name=WP_019842912.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AD11_RS23750;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_019842912.1;start_range=.,1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 880 3573 . + . ID=gene-AD11_RS23755;Name=chiA;gbkey=Gene;gene=chiA;gene_biotype=protein_coding;locus_tag=AD11_RS23755;old_locus_tag=AD11_4157 NZ_JJLL01000157.1 Protein Homology CDS 880 3573 . + 0 ID=cds-WP_020239449.1;Parent=gene-AD11_RS23755;Dbxref=GenBank:WP_020239449.1;Name=WP_020239449.1;gbkey=CDS;gene=chiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417797.1;locus_tag=AD11_RS23755;product=bifunctional chitinase/lysozyme;protein_id=WP_020239449.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 3742 3936 . + . ID=gene-AD11_RS23760;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AD11_RS23760;old_locus_tag=AD11_4158 NZ_JJLL01000157.1 Protein Homology CDS 3742 3936 . + 0 ID=cds-WP_000289085.1;Parent=gene-AD11_RS23760;Dbxref=GenBank:WP_000289085.1;Name=WP_000289085.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417796.1;locus_tag=AD11_RS23760;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289085.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 4008 4484 . + . ID=gene-AD11_RS23765;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AD11_RS23765;old_locus_tag=AD11_4159 NZ_JJLL01000157.1 Protein Homology CDS 4008 4484 . + 0 ID=cds-WP_000675504.1;Parent=gene-AD11_RS23765;Dbxref=GenBank:WP_000675504.1;Name=WP_000675504.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417795.1;locus_tag=AD11_RS23765;product=bacterioferritin;protein_id=WP_000675504.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 4513 5190 . - . ID=gene-AD11_RS23770;Name=gspO;gbkey=Gene;gene=gspO;gene_biotype=protein_coding;locus_tag=AD11_RS23770;old_locus_tag=AD11_4160 NZ_JJLL01000157.1 Protein Homology CDS 4513 5190 . - 0 ID=cds-WP_000178161.1;Parent=gene-AD11_RS23770;Dbxref=GenBank:WP_000178161.1;Name=WP_000178161.1;gbkey=CDS;gene=gspO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417794.1;locus_tag=AD11_RS23770;product=prepilin peptidase GspO;protein_id=WP_000178161.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 5190 5651 . - . ID=gene-AD11_RS23775;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=AD11_RS23775;old_locus_tag=AD11_4161 NZ_JJLL01000157.1 Protein Homology CDS 5190 5651 . - 0 ID=cds-WP_001295161.1;Parent=gene-AD11_RS23775;Dbxref=GenBank:WP_001295161.1;Name=WP_001295161.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417793.2;locus_tag=AD11_RS23775;product=type II secretion system protein GspM;protein_id=WP_001295161.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 5648 6811 . - . ID=gene-AD11_RS23780;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=AD11_RS23780;old_locus_tag=AD11_4162 NZ_JJLL01000157.1 Protein Homology CDS 5648 6811 . - 0 ID=cds-WP_001618895.1;Parent=gene-AD11_RS23780;Dbxref=GenBank:WP_001618895.1;Name=WP_001618895.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417792.2;locus_tag=AD11_RS23780;product=type II secretion system protein GspL;protein_id=WP_001618895.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 6826 7809 . - . ID=gene-AD11_RS23785;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=AD11_RS23785;old_locus_tag=AD11_4163 NZ_JJLL01000157.1 Protein Homology CDS 6826 7809 . - 0 ID=cds-WP_001058521.1;Parent=gene-AD11_RS23785;Dbxref=GenBank:WP_001058521.1;Name=WP_001058521.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417791.1;locus_tag=AD11_RS23785;product=type II secretion system minor pseudopilin GspK;protein_id=WP_001058521.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 7802 8389 . - . ID=gene-AD11_RS23790;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=AD11_RS23790;old_locus_tag=AD11_4164 NZ_JJLL01000157.1 Protein Homology CDS 7802 8389 . - 0 ID=cds-WP_000610633.1;Parent=gene-AD11_RS23790;Dbxref=GenBank:WP_000610633.1;Name=WP_000610633.1;gbkey=CDS;gene=gspJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417790.1;locus_tag=AD11_RS23790;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_000610633.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 8382 8759 . - . ID=gene-AD11_RS23795;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=AD11_RS23795;old_locus_tag=AD11_4165 NZ_JJLL01000157.1 Protein Homology CDS 8382 8759 . - 0 ID=cds-WP_032083719.1;Parent=gene-AD11_RS23795;Dbxref=GenBank:WP_032083719.1;Name=WP_032083719.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417789.4;locus_tag=AD11_RS23795;product=type II secretion system minor pseudopilin GspI;protein_id=WP_032083719.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 8756 9265 . - . ID=gene-AD11_RS23800;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=AD11_RS23800;old_locus_tag=AD11_4166 NZ_JJLL01000157.1 Protein Homology CDS 8756 9265 . - 0 ID=cds-WP_001618891.1;Parent=gene-AD11_RS23800;Dbxref=GenBank:WP_001618891.1;Name=WP_001618891.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417788.1;locus_tag=AD11_RS23800;product=type II secretion system minor pseudopilin GspH;protein_id=WP_001618891.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 9273 9710 . - . ID=gene-AD11_RS31030;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=AD11_RS31030;old_locus_tag=AD11_4167 NZ_JJLL01000157.1 Protein Homology CDS 9273 9710 . - 0 ID=cds-WP_001202877.1;Parent=gene-AD11_RS31030;Dbxref=GenBank:WP_001202877.1;Name=WP_001202877.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417787.1;locus_tag=AD11_RS31030;product=type II secretion system major pseudopilin GspG;protein_id=WP_001202877.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 9720 10916 . - . ID=gene-AD11_RS23810;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=AD11_RS23810;old_locus_tag=AD11_4168 NZ_JJLL01000157.1 Protein Homology CDS 9720 10916 . - 0 ID=cds-WP_001109573.1;Parent=gene-AD11_RS23810;Dbxref=GenBank:WP_001109573.1;Name=WP_001109573.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417786.1;locus_tag=AD11_RS23810;product=type II secretion system inner membrane protein GspF;protein_id=WP_001109573.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 10913 12394 . - . ID=gene-AD11_RS23815;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AD11_RS23815;old_locus_tag=AD11_4169 NZ_JJLL01000157.1 Protein Homology CDS 10913 12394 . - 0 ID=cds-WP_001219894.1;Parent=gene-AD11_RS23815;Dbxref=GenBank:WP_001219894.1;Name=WP_001219894.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417785.1;locus_tag=AD11_RS23815;product=type II secretion system ATPase GspE;protein_id=WP_001219894.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 12404 14356 . - . ID=gene-AD11_RS23820;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=AD11_RS23820;old_locus_tag=AD11_4170 NZ_JJLL01000157.1 Protein Homology CDS 12404 14356 . - 0 ID=cds-WP_001326512.1;Parent=gene-AD11_RS23820;Dbxref=GenBank:WP_001326512.1;Name=WP_001326512.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417784.4;locus_tag=AD11_RS23820;product=type II secretion system secretin GspD;protein_id=WP_001326512.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 14340 15155 . - . ID=gene-AD11_RS23825;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=AD11_RS23825;old_locus_tag=AD11_4171 NZ_JJLL01000157.1 Protein Homology CDS 14340 15155 . - 0 ID=cds-WP_033864984.1;Parent=gene-AD11_RS23825;Dbxref=GenBank:WP_033864984.1;Name=WP_033864984.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417783.1;locus_tag=AD11_RS23825;product=type II secretion system protein GspC;protein_id=WP_033864984.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 15335 16804 . + . ID=gene-AD11_RS23830;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AD11_RS23830;old_locus_tag=AD11_4172 NZ_JJLL01000157.1 Protein Homology CDS 15335 16804 . + 0 ID=cds-WP_000107576.1;Parent=gene-AD11_RS23830;Dbxref=GenBank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AD11_RS23830;product=type II secretion system protein GspA;protein_id=WP_000107576.1;transl_table=11 NZ_JJLL01000157.1 RefSeq pseudogene 16806 17224 . + . ID=gene-AD11_RS23835;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=pseudogene;locus_tag=AD11_RS23835;old_locus_tag=AD11_4173;pseudo=true NZ_JJLL01000157.1 Protein Homology CDS 16806 17224 . + 0 ID=cds-AD11_RS23835;Parent=gene-AD11_RS23835;Note=frameshifted;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AD11_RS23835;product=putative general secretion pathway protein GspB;pseudo=true;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 17462 17773 . + . ID=gene-AD11_RS23840;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AD11_RS23840;old_locus_tag=AD11_4174 NZ_JJLL01000157.1 Protein Homology CDS 17462 17773 . + 0 ID=cds-WP_001181004.1;Parent=gene-AD11_RS23840;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AD11_RS23840;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 17806 18435 . + . ID=gene-AD11_RS23845;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AD11_RS23845;old_locus_tag=AD11_4175 NZ_JJLL01000157.1 Protein Homology CDS 17806 18435 . + 0 ID=cds-WP_000579833.1;Parent=gene-AD11_RS23845;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AD11_RS23845;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 18446 19051 . + . ID=gene-AD11_RS23850;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AD11_RS23850;old_locus_tag=AD11_4176 NZ_JJLL01000157.1 Protein Homology CDS 18446 19051 . + 0 ID=cds-WP_000424395.1;Parent=gene-AD11_RS23850;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AD11_RS23850;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 19048 19350 . + . ID=gene-AD11_RS23855;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AD11_RS23855;old_locus_tag=AD11_4177 NZ_JJLL01000157.1 Protein Homology CDS 19048 19350 . + 0 ID=cds-WP_000617544.1;Parent=gene-AD11_RS23855;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AD11_RS23855;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 19368 20189 . + . ID=gene-AD11_RS23860;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AD11_RS23860;old_locus_tag=AD11_4178 NZ_JJLL01000157.1 Protein Homology CDS 19368 20189 . + 0 ID=cds-WP_000301864.1;Parent=gene-AD11_RS23860;Dbxref=GenBank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AD11_RS23860;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 20206 20484 . + . ID=gene-AD11_RS23865;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AD11_RS23865 NZ_JJLL01000157.1 Protein Homology CDS 20206 20484 . + 0 ID=cds-WP_001138117.1;Parent=gene-AD11_RS23865;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AD11_RS23865;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 20499 20831 . + . ID=gene-AD11_RS23870;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AD11_RS23870;old_locus_tag=AD11_4180 NZ_JJLL01000157.1 Protein Homology CDS 20499 20831 . + 0 ID=cds-WP_000447529.1;Parent=gene-AD11_RS23870;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AD11_RS23870;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 20849 21550 . + . ID=gene-AD11_RS23875;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AD11_RS23875;old_locus_tag=AD11_4181 NZ_JJLL01000157.1 Protein Homology CDS 20849 21550 . + 0 ID=cds-WP_000529945.1;Parent=gene-AD11_RS23875;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AD11_RS23875;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 21563 21973 . + . ID=gene-AD11_RS23880;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AD11_RS23880;old_locus_tag=AD11_4182 NZ_JJLL01000157.1 Protein Homology CDS 21563 21973 . + 0 ID=cds-WP_000941212.1;Parent=gene-AD11_RS23880;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AD11_RS23880;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 21973 22164 . + . ID=gene-AD11_RS23885;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AD11_RS23885;old_locus_tag=AD11_4183 NZ_JJLL01000157.1 Protein Homology CDS 21973 22164 . + 0 ID=cds-WP_000644741.1;Parent=gene-AD11_RS23885;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AD11_RS23885;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 22164 22418 . + . ID=gene-AD11_RS23890;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AD11_RS23890;old_locus_tag=AD11_4184 NZ_JJLL01000157.1 Protein Homology CDS 22164 22418 . + 0 ID=cds-WP_000130100.1;Parent=gene-AD11_RS23890;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AD11_RS23890;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 22583 22954 . + . ID=gene-AD11_RS23895;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AD11_RS23895;old_locus_tag=AD11_4185 NZ_JJLL01000157.1 Protein Homology CDS 22583 22954 . + 0 ID=cds-WP_000613955.1;Parent=gene-AD11_RS23895;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AD11_RS23895;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 22965 23279 . + . ID=gene-AD11_RS23900;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AD11_RS23900;old_locus_tag=AD11_4186 NZ_JJLL01000157.1 Protein Homology CDS 22965 23279 . + 0 ID=cds-WP_000729185.1;Parent=gene-AD11_RS23900;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AD11_RS23900;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 23294 23833 . + . ID=gene-AD11_RS23905;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AD11_RS23905;old_locus_tag=AD11_4187 NZ_JJLL01000157.1 Protein Homology CDS 23294 23833 . + 0 ID=cds-WP_001096200.1;Parent=gene-AD11_RS23905;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AD11_RS23905;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 23848 24153 . + . ID=gene-AD11_RS23910;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AD11_RS23910;old_locus_tag=AD11_4188 NZ_JJLL01000157.1 Protein Homology CDS 23848 24153 . + 0 ID=cds-WP_001118930.1;Parent=gene-AD11_RS23910;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AD11_RS23910;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 24187 24579 . + . ID=gene-AD11_RS23915;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AD11_RS23915;old_locus_tag=AD11_4189 NZ_JJLL01000157.1 Protein Homology CDS 24187 24579 . + 0 ID=cds-WP_000062611.1;Parent=gene-AD11_RS23915;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AD11_RS23915;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 24592 25125 . + . ID=gene-AD11_RS23920;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AD11_RS23920;old_locus_tag=AD11_4190 NZ_JJLL01000157.1 Protein Homology CDS 24592 25125 . + 0 ID=cds-WP_000091945.1;Parent=gene-AD11_RS23920;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AD11_RS23920;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 25135 25488 . + . ID=gene-AD11_RS23925;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AD11_RS23925;old_locus_tag=AD11_4191 NZ_JJLL01000157.1 Protein Homology CDS 25135 25488 . + 0 ID=cds-WP_000358960.1;Parent=gene-AD11_RS23925;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AD11_RS23925;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 25503 26006 . + . ID=gene-AD11_RS23930;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AD11_RS23930;old_locus_tag=AD11_4192 NZ_JJLL01000157.1 Protein Homology CDS 25503 26006 . + 0 ID=cds-WP_000940121.1;Parent=gene-AD11_RS23930;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AD11_RS23930;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 26010 26189 . + . ID=gene-AD11_RS23935;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AD11_RS23935;old_locus_tag=AD11_4193 NZ_JJLL01000157.1 Protein Homology CDS 26010 26189 . + 0 ID=cds-WP_001140433.1;Parent=gene-AD11_RS23935;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AD11_RS23935;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 26193 26627 . + . ID=gene-AD11_RS23940;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AD11_RS23940;old_locus_tag=AD11_4194 NZ_JJLL01000157.1 Protein Homology CDS 26193 26627 . + 0 ID=cds-WP_001238914.1;Parent=gene-AD11_RS23940;Dbxref=GenBank:WP_001238914.1;Name=WP_001238914.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AD11_RS23940;product=50S ribosomal protein L15;protein_id=WP_001238914.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 26635 27966 . + . ID=gene-AD11_RS23945;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AD11_RS23945;old_locus_tag=AD11_4195 NZ_JJLL01000157.1 Protein Homology CDS 26635 27966 . + 0 ID=cds-WP_001118861.1;Parent=gene-AD11_RS23945;Dbxref=GenBank:WP_001118861.1;Name=WP_001118861.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AD11_RS23945;product=preprotein translocase subunit SecY;protein_id=WP_001118861.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 27998 28114 . + . ID=gene-AD11_RS23950;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AD11_RS23950;old_locus_tag=AD11_4196 NZ_JJLL01000157.1 Protein Homology CDS 27998 28114 . + 0 ID=cds-WP_000868187.1;Parent=gene-AD11_RS23950;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AD11_RS23950;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 28261 28617 . + . ID=gene-AD11_RS23955;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AD11_RS23955;old_locus_tag=AD11_4197 NZ_JJLL01000157.1 Protein Homology CDS 28261 28617 . + 0 ID=cds-WP_000090775.1;Parent=gene-AD11_RS23955;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AD11_RS23955;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 28634 29023 . + . ID=gene-AD11_RS23960;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AD11_RS23960;old_locus_tag=AD11_4198 NZ_JJLL01000157.1 Protein Homology CDS 28634 29023 . + 0 ID=cds-WP_001029684.1;Parent=gene-AD11_RS23960;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AD11_RS23960;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 29057 29677 . + . ID=gene-AD11_RS23965;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AD11_RS23965;old_locus_tag=AD11_4199 NZ_JJLL01000157.1 Protein Homology CDS 29057 29677 . + 0 ID=cds-WP_000135224.1;Parent=gene-AD11_RS23965;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AD11_RS23965;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 29703 30692 . + . ID=gene-AD11_RS23970;Name=AD11_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS23970;old_locus_tag=AD11_4200 NZ_JJLL01000157.1 Protein Homology CDS 29703 30692 . + 0 ID=cds-WP_001162094.1;Parent=gene-AD11_RS23970;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AD11_RS23970;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 30733 31116 . + . ID=gene-AD11_RS23975;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AD11_RS23975;old_locus_tag=AD11_4201 NZ_JJLL01000157.1 Protein Homology CDS 30733 31116 . + 0 ID=cds-WP_001216368.1;Parent=gene-AD11_RS23975;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AD11_RS23975;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 31223 31591 . + . ID=gene-AD11_RS23980;Name=AD11_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS23980;old_locus_tag=AD11_4202 NZ_JJLL01000157.1 Protein Homology CDS 31223 31591 . + 0 ID=cds-WP_000266486.1;Parent=gene-AD11_RS23980;Dbxref=GenBank:WP_000266486.1;Name=WP_000266486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AD11_RS23980;product=DUF1992 domain-containing protein;protein_id=WP_000266486.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 31602 32027 . + . ID=gene-AD11_RS23985;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AD11_RS23985;old_locus_tag=AD11_4203 NZ_JJLL01000157.1 Protein Homology CDS 31602 32027 . + 0 ID=cds-WP_000285607.1;Parent=gene-AD11_RS23985;Dbxref=GenBank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AD11_RS23985;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 32083 32301 . + . ID=gene-AD11_RS23990;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AD11_RS23990 NZ_JJLL01000157.1 Protein Homology CDS 32083 32301 . + 0 ID=cds-WP_000092696.1;Parent=gene-AD11_RS23990;Dbxref=GenBank:WP_000092696.1;Name=WP_000092696.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AD11_RS23990;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092696.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 32298 32708 . - . ID=gene-AD11_RS23995;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AD11_RS23995;old_locus_tag=AD11_4204 NZ_JJLL01000157.1 Protein Homology CDS 32298 32708 . - 0 ID=cds-WP_000022442.1;Parent=gene-AD11_RS23995;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AD11_RS23995;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 32838 34214 . - . ID=gene-AD11_RS24000;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AD11_RS24000;old_locus_tag=AD11_4205 NZ_JJLL01000157.1 Protein Homology CDS 32838 34214 . - 0 ID=cds-WP_000691382.1;Parent=gene-AD11_RS24000;Dbxref=GenBank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AD11_RS24000;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 34236 35525 . - . ID=gene-AD11_RS24005;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AD11_RS24005;old_locus_tag=AD11_4206 NZ_JJLL01000157.1 Protein Homology CDS 34236 35525 . - 0 ID=cds-WP_033864985.1;Parent=gene-AD11_RS24005;Dbxref=GenBank:WP_033864985.1;Name=WP_033864985.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AD11_RS24005;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_033864985.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 35571 36518 . - . ID=gene-AD11_RS24010;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AD11_RS24010;old_locus_tag=AD11_4207 NZ_JJLL01000157.1 Protein Homology CDS 35571 36518 . - 0 ID=cds-WP_001618885.1;Parent=gene-AD11_RS24010;Dbxref=GenBank:WP_001618885.1;Name=WP_001618885.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417746.1;locus_tag=AD11_RS24010;product=methionyl-tRNA formyltransferase;protein_id=WP_001618885.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 36533 37042 . - . ID=gene-AD11_RS24015;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AD11_RS24015;old_locus_tag=AD11_4208 NZ_JJLL01000157.1 Protein Homology CDS 36533 37042 . - 0 ID=cds-WP_000114984.1;Parent=gene-AD11_RS24015;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AD11_RS24015;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 37172 38296 . + . ID=gene-AD11_RS24020;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AD11_RS24020;old_locus_tag=AD11_4209 NZ_JJLL01000157.1 Protein Homology CDS 37172 38296 . + 0 ID=cds-WP_000228551.1;Parent=gene-AD11_RS24020;Dbxref=GenBank:WP_000228551.1;Name=WP_000228551.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AD11_RS24020;product=DNA-protecting protein DprA;protein_id=WP_000228551.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 38268 38741 . + . ID=gene-AD11_RS24025;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AD11_RS24025;old_locus_tag=AD11_4210 NZ_JJLL01000157.1 Protein Homology CDS 38268 38741 . + 0 ID=cds-WP_000460680.1;Parent=gene-AD11_RS24025;Dbxref=GenBank:WP_000460680.1;Name=WP_000460680.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AD11_RS24025;product=DUF494 family protein Smg;protein_id=WP_000460680.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 38770 39312 . + . ID=gene-AD11_RS24030;Name=AD11_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24030 NZ_JJLL01000157.1 Protein Homology CDS 38770 39312 . + 0 ID=cds-WP_001129722.1;Parent=gene-AD11_RS24030;Dbxref=GenBank:WP_001129722.1;Name=WP_001129722.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AD11_RS24030;product=DNA topoisomerase family protein;protein_id=WP_001129722.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 39317 39889 . + . ID=gene-AD11_RS24035;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AD11_RS24035;old_locus_tag=AD11_4212 NZ_JJLL01000157.1 Protein Homology CDS 39317 39889 . + 0 ID=cds-WP_001301412.1;Parent=gene-AD11_RS24035;Dbxref=GenBank:WP_001301412.1;Name=WP_001301412.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417741.1;locus_tag=AD11_RS24035;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001301412.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 39894 40712 . + . ID=gene-AD11_RS24040;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AD11_RS24040;old_locus_tag=AD11_4213 NZ_JJLL01000157.1 Protein Homology CDS 39894 40712 . + 0 ID=cds-WP_000451243.1;Parent=gene-AD11_RS24040;Dbxref=GenBank:WP_000451243.1;Name=WP_000451243.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AD11_RS24040;product=shikimate dehydrogenase;protein_id=WP_000451243.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 40709 40966 . + . ID=gene-AD11_RS24045;Name=AD11_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24045;old_locus_tag=AD11_4214 NZ_JJLL01000157.1 Protein Homology CDS 40709 40966 . + 0 ID=cds-WP_001070563.1;Parent=gene-AD11_RS24045;Dbxref=GenBank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AD11_RS24045;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 40942 41496 . - . ID=gene-AD11_RS24050;Name=AD11_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24050;old_locus_tag=AD11_4215 NZ_JJLL01000157.1 Protein Homology CDS 40942 41496 . - 0 ID=cds-WP_001286216.1;Parent=gene-AD11_RS24050;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AD11_RS24050;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JJLL01000157.1 RefSeq gene 41970 42941 . + . ID=gene-AD11_RS24055;Name=AD11_RS24055;end_range=42941,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS24055;old_locus_tag=AD11_4216;partial=true NZ_JJLL01000157.1 cmsearch rRNA 41970 42941 . + . ID=rna-AD11_RS24055;Parent=gene-AD11_RS24055;Dbxref=RFAM:RF00177;end_range=42941,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24055;partial=true;product=16S ribosomal RNA NZ_JJLL01000157.1 cmsearch exon 41970 42941 . + . ID=exon-AD11_RS24055-1;Parent=rna-AD11_RS24055;Dbxref=RFAM:RF00177;end_range=42941,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24055;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLL01000158.1 1 97607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000158.1 RefSeq region 1 97607 . + . ID=NZ_JJLL01000158.1:1..97607;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000158.1 RefSeq gene 1 465 . + . ID=gene-AD11_RS24060;Name=AD11_RS24060;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS24060;partial=true;start_range=.,1 NZ_JJLL01000158.1 cmsearch rRNA 1 465 . + . ID=rna-AD11_RS24060;Parent=gene-AD11_RS24060;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24060;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000158.1 cmsearch exon 1 465 . + . ID=exon-AD11_RS24060-1;Parent=rna-AD11_RS24060;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24060;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000158.1 RefSeq gene 562 677 . + . ID=gene-AD11_RS24065;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS24065;old_locus_tag=AD11_4217 NZ_JJLL01000158.1 cmsearch rRNA 562 677 . + . ID=rna-AD11_RS24065;Parent=gene-AD11_RS24065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24065;product=5S ribosomal RNA NZ_JJLL01000158.1 cmsearch exon 562 677 . + . ID=exon-AD11_RS24065-1;Parent=rna-AD11_RS24065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24065;product=5S ribosomal RNA NZ_JJLL01000158.1 RefSeq gene 732 808 . + . ID=gene-AD11_RS24070;Name=AD11_RS24070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS24070;old_locus_tag=AD11_4219 NZ_JJLL01000158.1 tRNAscan-SE tRNA 732 808 . + . ID=rna-AD11_RS24070;Parent=gene-AD11_RS24070;anticodon=(pos:766..768);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24070;product=tRNA-Asp NZ_JJLL01000158.1 tRNAscan-SE exon 732 808 . + . ID=exon-AD11_RS24070-1;Parent=rna-AD11_RS24070;anticodon=(pos:766..768);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24070;product=tRNA-Asp NZ_JJLL01000158.1 RefSeq gene 817 892 . + . ID=gene-AD11_RS24075;Name=AD11_RS24075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS24075;old_locus_tag=AD11_4220 NZ_JJLL01000158.1 tRNAscan-SE tRNA 817 892 . + . ID=rna-AD11_RS24075;Parent=gene-AD11_RS24075;anticodon=(pos:850..852);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24075;product=tRNA-Trp NZ_JJLL01000158.1 tRNAscan-SE exon 817 892 . + . ID=exon-AD11_RS24075-1;Parent=rna-AD11_RS24075;anticodon=(pos:850..852);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24075;product=tRNA-Trp NZ_JJLL01000158.1 RefSeq gene 988 1827 . - . ID=gene-AD11_RS24080;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AD11_RS24080;old_locus_tag=AD11_4221 NZ_JJLL01000158.1 Protein Homology CDS 988 1827 . - 0 ID=cds-WP_001398063.1;Parent=gene-AD11_RS24080;Dbxref=GenBank:WP_001398063.1;Name=WP_001398063.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709570.1;locus_tag=AD11_RS24080;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001398063.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 1946 2284 . + . ID=gene-AD11_RS24085;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AD11_RS24085;old_locus_tag=AD11_4222 NZ_JJLL01000158.1 Protein Homology CDS 1946 2284 . + 0 ID=cds-WP_000841001.1;Parent=gene-AD11_RS24085;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AD11_RS24085;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 2309 3829 . - . ID=gene-AD11_RS24090;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;locus_tag=AD11_RS24090;old_locus_tag=AD11_4223 NZ_JJLL01000158.1 Protein Homology CDS 2309 3829 . - 0 ID=cds-WP_000058964.1;Parent=gene-AD11_RS24090;Dbxref=GenBank:WP_000058964.1;Name=WP_000058964.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AD11_RS24090;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058964.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 4182 4280 . + . ID=gene-AD11_RS24095;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AD11_RS24095 NZ_JJLL01000158.1 Protein Homology CDS 4182 4280 . + 0 ID=cds-WP_001311244.1;Parent=gene-AD11_RS24095;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AD11_RS24095;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 4367 4417 . + . ID=gene-AD11_RS31790;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AD11_RS31790 NZ_JJLL01000158.1 Protein Homology CDS 4367 4417 . + 0 ID=cds-WP_001387183.1;Parent=gene-AD11_RS31790;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AD11_RS31790;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 4420 6066 . + . ID=gene-AD11_RS24100;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AD11_RS24100;old_locus_tag=AD11_4224 NZ_JJLL01000158.1 Protein Homology CDS 4420 6066 . + 0 ID=cds-WP_001012624.1;Parent=gene-AD11_RS24100;Dbxref=GenBank:WP_001012624.1;Name=WP_001012624.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AD11_RS24100;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012624.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 6063 6326 . + . ID=gene-AD11_RS24105;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AD11_RS24105;old_locus_tag=AD11_4225 NZ_JJLL01000158.1 Protein Homology CDS 6063 6326 . + 0 ID=cds-WP_000983255.1;Parent=gene-AD11_RS24105;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AD11_RS24105;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 6346 7275 . + . ID=gene-AD11_RS24110;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AD11_RS24110;old_locus_tag=AD11_4226 NZ_JJLL01000158.1 Protein Homology CDS 6346 7275 . + 0 ID=cds-WP_000208520.1;Parent=gene-AD11_RS24110;Dbxref=GenBank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AD11_RS24110;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 7340 9190 . + . ID=gene-AD11_RS24115;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AD11_RS24115;old_locus_tag=AD11_4227 NZ_JJLL01000158.1 Protein Homology CDS 7340 9190 . + 0 ID=cds-WP_001127420.1;Parent=gene-AD11_RS24115;Dbxref=GenBank:WP_001127420.1;Name=WP_001127420.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127420.1;locus_tag=AD11_RS24115;product=dihydroxy-acid dehydratase;protein_id=WP_001127420.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 9193 10737 . + . ID=gene-AD11_RS24120;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AD11_RS24120;old_locus_tag=AD11_4228 NZ_JJLL01000158.1 Protein Homology CDS 9193 10737 . + 0 ID=cds-WP_001460158.1;Parent=gene-AD11_RS24120;Dbxref=GenBank:WP_001460158.1;Name=WP_001460158.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=AD11_RS24120;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001460158.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 10789 11682 . - . ID=gene-AD11_RS24125;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AD11_RS24125;old_locus_tag=AD11_4229 NZ_JJLL01000158.1 Protein Homology CDS 10789 11682 . - 0 ID=cds-WP_000365774.1;Parent=gene-AD11_RS24125;Dbxref=GenBank:WP_000365774.1;Name=WP_000365774.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418221.1;locus_tag=AD11_RS24125;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365774.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 11832 13307 . + . ID=gene-AD11_RS24130;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AD11_RS24130;old_locus_tag=AD11_4230 NZ_JJLL01000158.1 Protein Homology CDS 11832 13307 . + 0 ID=cds-WP_001491404.1;Parent=gene-AD11_RS24130;Dbxref=GenBank:WP_001491404.1;Name=WP_001491404.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AD11_RS24130;product=ketol-acid reductoisomerase;protein_id=WP_001491404.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 13394 13675 . - . ID=gene-AD11_RS24135;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AD11_RS24135;old_locus_tag=AD11_4231 NZ_JJLL01000158.1 Protein Homology CDS 13394 13675 . - 0 ID=cds-WP_001140251.1;Parent=gene-AD11_RS24135;Dbxref=GenBank:WP_001140251.1;Name=WP_001140251.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AD11_RS24135;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140251.1;transl_table=11 NZ_JJLL01000158.1 RefSeq pseudogene 13874 14322 . - . ID=gene-AD11_RS31795;Name=AD11_RS31795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31795;pseudo=true NZ_JJLL01000158.1 Protein Homology CDS 13874 14322 . - 0 ID=cds-AD11_RS31795;Parent=gene-AD11_RS31795;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AD11_RS31795;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 14539 16560 . + . ID=gene-AD11_RS24145;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AD11_RS24145;old_locus_tag=AD11_4232 NZ_JJLL01000158.1 Protein Homology CDS 14539 16560 . + 0 ID=cds-WP_001238890.1;Parent=gene-AD11_RS24145;Dbxref=GenBank:WP_001238890.1;Name=WP_001238890.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026251.1;locus_tag=AD11_RS24145;product=DNA helicase Rep;protein_id=WP_001238890.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 16607 18091 . - . ID=gene-AD11_RS24150;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AD11_RS24150;old_locus_tag=AD11_4233 NZ_JJLL01000158.1 Protein Homology CDS 16607 18091 . - 0 ID=cds-WP_001401379.1;Parent=gene-AD11_RS24150;Dbxref=GenBank:WP_001401379.1;Name=WP_001401379.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AD11_RS24150;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001401379.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 18225 19490 . - . ID=gene-AD11_RS24155;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AD11_RS24155;old_locus_tag=AD11_4234 NZ_JJLL01000158.1 Protein Homology CDS 18225 19490 . - 0 ID=cds-WP_000047499.1;Parent=gene-AD11_RS24155;Dbxref=GenBank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AD11_RS24155;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 19621 19950 . + . ID=gene-AD11_RS24160;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AD11_RS24160;old_locus_tag=AD11_4235 NZ_JJLL01000158.1 Protein Homology CDS 19621 19950 . + 0 ID=cds-WP_001280776.1;Parent=gene-AD11_RS24160;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AD11_RS24160;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 20091 20192 . + . ID=gene-AD11_RS24165;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AD11_RS24165 NZ_JJLL01000158.1 Protein Homology CDS 20091 20192 . + 0 ID=cds-WP_001295255.1;Parent=gene-AD11_RS24165;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AD11_RS24165;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 20277 21536 . + . ID=gene-AD11_RS24170;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AD11_RS24170;old_locus_tag=AD11_4236 NZ_JJLL01000158.1 Protein Homology CDS 20277 21536 . + 0 ID=cds-WP_001054527.1;Parent=gene-AD11_RS24170;Dbxref=GenBank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AD11_RS24170;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 21776 22879 . + . ID=gene-AD11_RS24180;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AD11_RS24180;old_locus_tag=AD11_4238 NZ_JJLL01000158.1 Protein Homology CDS 21776 22879 . + 0 ID=cds-WP_001050960.1;Parent=gene-AD11_RS24180;Dbxref=GenBank:WP_001050960.1;Name=WP_001050960.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AD11_RS24180;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_001050960.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 22891 23937 . + . ID=gene-AD11_RS24185;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AD11_RS24185;old_locus_tag=AD11_4239 NZ_JJLL01000158.1 Protein Homology CDS 22891 23937 . + 0 ID=cds-WP_001295256.1;Parent=gene-AD11_RS24185;Dbxref=GenBank:WP_001295256.1;Name=WP_001295256.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AD11_RS24185;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001295256.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 23993 25123 . + . ID=gene-AD11_RS24190;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AD11_RS24190;old_locus_tag=AD11_4240 NZ_JJLL01000158.1 Protein Homology CDS 23993 25123 . + 0 ID=cds-WP_000866670.1;Parent=gene-AD11_RS24190;Dbxref=GenBank:WP_000866670.1;Name=WP_000866670.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AD11_RS24190;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866670.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 25120 26382 . + . ID=gene-AD11_RS24195;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AD11_RS24195;old_locus_tag=AD11_4241 NZ_JJLL01000158.1 Protein Homology CDS 25120 26382 . + 0 ID=cds-WP_000006621.1;Parent=gene-AD11_RS24195;Dbxref=GenBank:WP_000006621.1;Name=WP_000006621.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AD11_RS24195;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 26382 27449 . + . ID=gene-AD11_RS24200;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AD11_RS24200;old_locus_tag=AD11_4242 NZ_JJLL01000158.1 Protein Homology CDS 26382 27449 . + 0 ID=cds-WP_001226602.1;Parent=gene-AD11_RS24200;Dbxref=GenBank:WP_001226602.1;Name=WP_001226602.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026255.1;locus_tag=AD11_RS24200;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226602.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 27468 28349 . + . ID=gene-AD11_RS24205;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AD11_RS24205;old_locus_tag=AD11_4243 NZ_JJLL01000158.1 Protein Homology CDS 27468 28349 . + 0 ID=cds-WP_000676056.1;Parent=gene-AD11_RS24205;Dbxref=GenBank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AD11_RS24205;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 28327 29001 . + . ID=gene-AD11_RS24210;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AD11_RS24210;old_locus_tag=AD11_4244 NZ_JJLL01000158.1 Protein Homology CDS 28327 29001 . + 0 ID=cds-WP_001145183.1;Parent=gene-AD11_RS24210;Dbxref=GenBank:WP_001145183.1;Name=WP_001145183.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AD11_RS24210;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145183.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 29006 30136 . + . ID=gene-AD11_RS24215;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AD11_RS24215;old_locus_tag=AD11_4245 NZ_JJLL01000158.1 Protein Homology CDS 29006 30136 . + 0 ID=cds-WP_000612043.1;Parent=gene-AD11_RS24215;Dbxref=GenBank:WP_000612043.1;Name=WP_000612043.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AD11_RS24215;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612043.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 30138 31388 . + . ID=gene-AD11_RS24220;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AD11_RS24220;old_locus_tag=AD11_4246 NZ_JJLL01000158.1 Protein Homology CDS 30138 31388 . + 0 ID=cds-WP_000050265.1;Parent=gene-AD11_RS24220;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AD11_RS24220;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 31385 32464 . + . ID=gene-AD11_RS24225;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AD11_RS24225;old_locus_tag=AD11_4247 NZ_JJLL01000158.1 Protein Homology CDS 31385 32464 . + 0 ID=cds-WP_000217262.1;Parent=gene-AD11_RS24225;Dbxref=GenBank:WP_000217262.1;Name=WP_000217262.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=AD11_RS24225;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217262.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 32461 33813 . + . ID=gene-AD11_RS24230;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AD11_RS24230;old_locus_tag=AD11_4248 NZ_JJLL01000158.1 Protein Homology CDS 32461 33813 . + 0 ID=cds-WP_000055132.1;Parent=gene-AD11_RS24230;Dbxref=GenBank:WP_000055132.1;Name=WP_000055132.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=AD11_RS24230;product=ECA oligosaccharide polymerase;protein_id=WP_000055132.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 33816 34556 . + . ID=gene-AD11_RS24235;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AD11_RS24235;old_locus_tag=AD11_4249 NZ_JJLL01000158.1 Protein Homology CDS 33816 34556 . + 0 ID=cds-WP_001064040.1;Parent=gene-AD11_RS24235;Dbxref=GenBank:WP_001064040.1;Name=WP_001064040.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AD11_RS24235;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064040.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 34747 36132 . + . ID=gene-AD11_RS24240;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AD11_RS24240;old_locus_tag=AD11_4250 NZ_JJLL01000158.1 Protein Homology CDS 34747 36132 . + 0 ID=cds-WP_000774731.1;Parent=gene-AD11_RS24240;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AD11_RS24240;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 36235 36311 . + . ID=gene-AD11_RS24245;Name=AD11_RS24245;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS24245;old_locus_tag=AD11_4251 NZ_JJLL01000158.1 tRNAscan-SE tRNA 36235 36311 . + . ID=rna-AD11_RS24245;Parent=gene-AD11_RS24245;anticodon=(pos:36269..36271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24245;product=tRNA-Arg NZ_JJLL01000158.1 tRNAscan-SE exon 36235 36311 . + . ID=exon-AD11_RS24245-1;Parent=rna-AD11_RS24245;anticodon=(pos:36269..36271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24245;product=tRNA-Arg NZ_JJLL01000158.1 RefSeq gene 36370 36445 . + . ID=gene-AD11_RS24250;Name=AD11_RS24250;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS24250;old_locus_tag=AD11_4252 NZ_JJLL01000158.1 tRNAscan-SE tRNA 36370 36445 . + . ID=rna-AD11_RS24250;Parent=gene-AD11_RS24250;anticodon=(pos:36403..36405);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24250;product=tRNA-His NZ_JJLL01000158.1 tRNAscan-SE exon 36370 36445 . + . ID=exon-AD11_RS24250-1;Parent=rna-AD11_RS24250;anticodon=(pos:36403..36405);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24250;product=tRNA-His NZ_JJLL01000158.1 RefSeq gene 36466 36552 . + . ID=gene-AD11_RS24255;Name=AD11_RS24255;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS24255;old_locus_tag=AD11_4253 NZ_JJLL01000158.1 tRNAscan-SE tRNA 36466 36552 . + . ID=rna-AD11_RS24255;Parent=gene-AD11_RS24255;anticodon=(pos:36500..36502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24255;product=tRNA-Leu NZ_JJLL01000158.1 tRNAscan-SE exon 36466 36552 . + . ID=exon-AD11_RS24255-1;Parent=rna-AD11_RS24255;anticodon=(pos:36500..36502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24255;product=tRNA-Leu NZ_JJLL01000158.1 RefSeq gene 36595 36671 . + . ID=gene-AD11_RS24260;Name=AD11_RS24260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS24260;old_locus_tag=AD11_4254 NZ_JJLL01000158.1 tRNAscan-SE tRNA 36595 36671 . + . ID=rna-AD11_RS24260;Parent=gene-AD11_RS24260;anticodon=(pos:36629..36631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24260;product=tRNA-Pro NZ_JJLL01000158.1 tRNAscan-SE exon 36595 36671 . + . ID=exon-AD11_RS24260-1;Parent=rna-AD11_RS24260;anticodon=(pos:36629..36631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS24260;product=tRNA-Pro NZ_JJLL01000158.1 RefSeq gene 36818 38053 . + . ID=gene-AD11_RS24265;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=protein_coding;locus_tag=AD11_RS24265;old_locus_tag=AD11_4255 NZ_JJLL01000158.1 Protein Homology CDS 36818 38053 . + 0 ID=cds-WP_000941517.1;Parent=gene-AD11_RS24265;Dbxref=GenBank:WP_000941517.1;Name=WP_000941517.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026259.1;locus_tag=AD11_RS24265;product=anaerobic sulfatase maturase;protein_id=WP_000941517.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 38212 39867 . - . ID=gene-AD11_RS24270;Name=aslA;gbkey=Gene;gene=aslA;gene_biotype=protein_coding;locus_tag=AD11_RS24270;old_locus_tag=AD11_4256 NZ_JJLL01000158.1 Protein Homology CDS 38212 39867 . - 0 ID=cds-WP_033865855.1;Parent=gene-AD11_RS24270;Dbxref=GenBank:WP_033865855.1;Name=WP_033865855.1;gbkey=CDS;gene=aslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418245.1;locus_tag=AD11_RS24270;product=arylsulfatase AslA;protein_id=WP_033865855.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 40546 41742 . - . ID=gene-AD11_RS24275;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AD11_RS24275;old_locus_tag=AD11_4258 NZ_JJLL01000158.1 Protein Homology CDS 40546 41742 . - 0 ID=cds-WP_000921791.1;Parent=gene-AD11_RS24275;Dbxref=GenBank:WP_000921791.1;Name=WP_000921791.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AD11_RS24275;product=protoheme IX biogenesis protein HemY;protein_id=WP_000921791.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 41745 42926 . - . ID=gene-AD11_RS24280;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AD11_RS24280;old_locus_tag=AD11_4259 NZ_JJLL01000158.1 Protein Homology CDS 41745 42926 . - 0 ID=cds-WP_001618971.1;Parent=gene-AD11_RS24280;Dbxref=GenBank:WP_001618971.1;Name=WP_001618971.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312760.1;locus_tag=AD11_RS24280;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_001618971.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 42948 43688 . - . ID=gene-AD11_RS24285;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AD11_RS24285;old_locus_tag=AD11_4260 NZ_JJLL01000158.1 Protein Homology CDS 42948 43688 . - 0 ID=cds-WP_033865856.1;Parent=gene-AD11_RS24285;Dbxref=GenBank:WP_033865856.1;Name=WP_033865856.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312761.1;locus_tag=AD11_RS24285;product=uroporphyrinogen-III synthase;protein_id=WP_033865856.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 43685 44626 . - . ID=gene-AD11_RS24290;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AD11_RS24290;old_locus_tag=AD11_4261 NZ_JJLL01000158.1 Protein Homology CDS 43685 44626 . - 0 ID=cds-WP_001338644.1;Parent=gene-AD11_RS24290;Dbxref=GenBank:WP_001338644.1;Name=WP_001338644.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AD11_RS24290;product=hydroxymethylbilane synthase;protein_id=WP_001338644.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 45013 47559 . + . ID=gene-AD11_RS24295;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AD11_RS24295;old_locus_tag=AD11_4262 NZ_JJLL01000158.1 Protein Homology CDS 45013 47559 . + 0 ID=cds-WP_000281668.1;Parent=gene-AD11_RS24295;Dbxref=GenBank:WP_000281668.1;Name=WP_000281668.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418250.1;locus_tag=AD11_RS24295;product=class I adenylate cyclase;protein_id=WP_000281668.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 47599 47919 . - . ID=gene-AD11_RS24300;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AD11_RS24300;old_locus_tag=AD11_4263 NZ_JJLL01000158.1 Protein Homology CDS 47599 47919 . - 0 ID=cds-WP_000999947.1;Parent=gene-AD11_RS24300;Dbxref=GenBank:WP_000999947.1;Name=WP_000999947.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AD11_RS24300;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_JJLL01000158.1 RefSeq pseudogene 48045 48223 . - . ID=gene-AD11_RS32770;Name=AD11_RS32770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32770;partial=true;pseudo=true;start_range=.,48045 NZ_JJLL01000158.1 Protein Homology CDS 48045 48223 . - 0 ID=cds-AD11_RS32770;Parent=gene-AD11_RS32770;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AD11_RS32770;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,48045;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 48382 48585 . + . ID=gene-AD11_RS24305;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AD11_RS24305;old_locus_tag=AD11_4265 NZ_JJLL01000158.1 Protein Homology CDS 48382 48585 . + 0 ID=cds-WP_000799889.1;Parent=gene-AD11_RS24305;Dbxref=GenBank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AD11_RS24305;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799889.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 48622 49446 . + . ID=gene-AD11_RS24310;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AD11_RS24310;old_locus_tag=AD11_4266 NZ_JJLL01000158.1 Protein Homology CDS 48622 49446 . + 0 ID=cds-WP_001160654.1;Parent=gene-AD11_RS24310;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AD11_RS24310;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 49443 50150 . + . ID=gene-AD11_RS24315;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AD11_RS24315;old_locus_tag=AD11_4267 NZ_JJLL01000158.1 Protein Homology CDS 49443 50150 . + 0 ID=cds-WP_000812796.1;Parent=gene-AD11_RS24315;Dbxref=GenBank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AD11_RS24315;product=DUF484 domain-containing protein;protein_id=WP_000812796.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 50147 51043 . + . ID=gene-AD11_RS24320;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AD11_RS24320;old_locus_tag=AD11_4268 NZ_JJLL01000158.1 Protein Homology CDS 50147 51043 . + 0 ID=cds-WP_000130691.1;Parent=gene-AD11_RS24320;Dbxref=GenBank:WP_000130691.1;Name=WP_000130691.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418256.1;locus_tag=AD11_RS24320;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 51043 51759 . + . ID=gene-AD11_RS24325;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AD11_RS24325;old_locus_tag=AD11_4269 NZ_JJLL01000158.1 Protein Homology CDS 51043 51759 . + 0 ID=cds-WP_001213584.1;Parent=gene-AD11_RS24325;Dbxref=GenBank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AD11_RS24325;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 51843 54005 . + . ID=gene-AD11_RS24330;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AD11_RS24330;old_locus_tag=AD11_4270 NZ_JJLL01000158.1 Protein Homology CDS 51843 54005 . + 0 ID=cds-WP_000383406.1;Parent=gene-AD11_RS24330;Dbxref=GenBank:WP_000383406.1;Name=WP_000383406.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=AD11_RS24330;product=DNA helicase II;protein_id=WP_000383406.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 54152 54916 . - . ID=gene-AD11_RS24335;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AD11_RS24335;old_locus_tag=AD11_4272 NZ_JJLL01000158.1 Protein Homology CDS 54152 54916 . - 0 ID=cds-WP_000951133.1;Parent=gene-AD11_RS24335;Dbxref=GenBank:WP_000951133.1;Name=WP_000951133.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026261.1;locus_tag=AD11_RS24335;product=phosphodiester glycosidase family protein;protein_id=WP_000951133.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 55078 55134 . + . ID=gene-AD11_RS32775;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AD11_RS32775 NZ_JJLL01000158.1 Protein Homology CDS 55078 55134 . + 0 ID=cds-WP_211180520.1;Parent=gene-AD11_RS32775;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AD11_RS32775;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 55286 56236 . + . ID=gene-AD11_RS24345;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AD11_RS24345;old_locus_tag=AD11_4274 NZ_JJLL01000158.1 Protein Homology CDS 55286 56236 . + 0 ID=cds-WP_000947159.1;Parent=gene-AD11_RS24345;Dbxref=GenBank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AD11_RS24345;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 56279 56659 . - . ID=gene-AD11_RS24350;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AD11_RS24350;old_locus_tag=AD11_4275 NZ_JJLL01000158.1 Protein Homology CDS 56279 56659 . - 0 ID=cds-WP_000032581.1;Parent=gene-AD11_RS24350;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AD11_RS24350;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 56673 57053 . - . ID=gene-AD11_RS24355;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AD11_RS24355;old_locus_tag=AD11_4276 NZ_JJLL01000158.1 Protein Homology CDS 56673 57053 . - 0 ID=cds-WP_033865857.1;Parent=gene-AD11_RS24355;Dbxref=GenBank:WP_033865857.1;Name=WP_033865857.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AD11_RS24355;product=protein YigG;protein_id=WP_033865857.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 57148 58038 . - . ID=gene-AD11_RS24360;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AD11_RS24360;old_locus_tag=AD11_4277 NZ_JJLL01000158.1 Protein Homology CDS 57148 58038 . - 0 ID=cds-WP_000339104.1;Parent=gene-AD11_RS24360;Dbxref=GenBank:WP_000339104.1;Name=WP_000339104.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AD11_RS24360;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 58090 58557 . - . ID=gene-AD11_RS24365;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AD11_RS24365;old_locus_tag=AD11_4278 NZ_JJLL01000158.1 Protein Homology CDS 58090 58557 . - 0 ID=cds-WP_001277142.1;Parent=gene-AD11_RS24365;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AD11_RS24365;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 58722 59591 . + . ID=gene-AD11_RS24370;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AD11_RS24370;old_locus_tag=AD11_4279 NZ_JJLL01000158.1 Protein Homology CDS 58722 59591 . + 0 ID=cds-WP_001259700.1;Parent=gene-AD11_RS24370;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AD11_RS24370;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 59724 61553 . + . ID=gene-AD11_RS24375;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AD11_RS24375;old_locus_tag=AD11_4280 NZ_JJLL01000158.1 Protein Homology CDS 59724 61553 . + 0 ID=cds-WP_000035581.1;Parent=gene-AD11_RS24375;Dbxref=GenBank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AD11_RS24375;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 61617 62237 . + . ID=gene-AD11_RS24380;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AD11_RS24380;old_locus_tag=AD11_4281 NZ_JJLL01000158.1 Protein Homology CDS 61617 62237 . + 0 ID=cds-WP_000928824.1;Parent=gene-AD11_RS24380;Dbxref=GenBank:WP_000928824.1;Name=WP_000928824.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AD11_RS24380;product=threonine export protein RhtC;protein_id=WP_000928824.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 62299 62919 . - . ID=gene-AD11_RS24385;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AD11_RS24385;old_locus_tag=AD11_4282 NZ_JJLL01000158.1 Protein Homology CDS 62299 62919 . - 0 ID=cds-WP_000171710.1;Parent=gene-AD11_RS24385;Dbxref=GenBank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AD11_RS24385;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 63030 64052 . + . ID=gene-AD11_RS24390;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AD11_RS24390;old_locus_tag=AD11_4283 NZ_JJLL01000158.1 Protein Homology CDS 63030 64052 . + 0 ID=cds-WP_000487654.1;Parent=gene-AD11_RS24390;Dbxref=GenBank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AD11_RS24390;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 64060 64860 . + . ID=gene-AD11_RS24395;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AD11_RS24395;old_locus_tag=AD11_4284 NZ_JJLL01000158.1 Protein Homology CDS 64060 64860 . + 0 ID=cds-WP_000285353.1;Parent=gene-AD11_RS24395;Dbxref=GenBank:WP_000285353.1;Name=WP_000285353.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312783.1;locus_tag=AD11_RS24395;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285353.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 64936 65835 . + . ID=gene-AD11_RS24400;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AD11_RS24400;old_locus_tag=AD11_4285 NZ_JJLL01000158.1 Protein Homology CDS 64936 65835 . + 0 ID=cds-WP_001196238.1;Parent=gene-AD11_RS24400;Dbxref=GenBank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AD11_RS24400;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 65723 66676 . - . ID=gene-AD11_RS24405;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AD11_RS24405 NZ_JJLL01000158.1 Protein Homology CDS 65723 66676 . - 0 ID=cds-WP_000573621.1;Parent=gene-AD11_RS24405;Dbxref=GenBank:WP_000573621.1;Name=WP_000573621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AD11_RS24405;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573621.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 66913 69174 . + . ID=gene-AD11_RS24410;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AD11_RS24410;old_locus_tag=AD11_4286 NZ_JJLL01000158.1 Protein Homology CDS 66913 69174 . + 0 ID=cds-WP_000153907.1;Parent=gene-AD11_RS24410;Dbxref=GenBank:WP_000153907.1;Name=WP_000153907.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418273.1;locus_tag=AD11_RS24410;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000153907.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 69268 70164 . - . ID=gene-AD11_RS24415;Name=AD11_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24415;old_locus_tag=AD11_4287 NZ_JJLL01000158.1 Protein Homology CDS 69268 70164 . - 0 ID=cds-WP_000470717.1;Parent=gene-AD11_RS24415;Dbxref=GenBank:WP_000470717.1;Name=WP_000470717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000470721.1;locus_tag=AD11_RS24415;product=LysR substrate-binding domain-containing protein;protein_id=WP_000470717.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 70242 71465 . - . ID=gene-AD11_RS24420;Name=AD11_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24420;old_locus_tag=AD11_4288 NZ_JJLL01000158.1 Protein Homology CDS 70242 71465 . - 0 ID=cds-WP_001227362.1;Parent=gene-AD11_RS24420;Dbxref=GenBank:WP_001227362.1;Name=WP_001227362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020234945.1;locus_tag=AD11_RS24420;product=cytosine permease;protein_id=WP_001227362.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 71491 71880 . - . ID=gene-AD11_RS24425;Name=AD11_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24425;old_locus_tag=AD11_4289 NZ_JJLL01000158.1 Protein Homology CDS 71491 71880 . - 0 ID=cds-WP_000214035.1;Parent=gene-AD11_RS24425;Dbxref=GenBank:WP_000214035.1;Name=WP_000214035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214032.1;locus_tag=AD11_RS24425;product=allophanate hydrolase-related protein;protein_id=WP_000214035.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 71897 72853 . - . ID=gene-AD11_RS24430;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AD11_RS24430;old_locus_tag=AD11_4290 NZ_JJLL01000158.1 Protein Homology CDS 71897 72853 . - 0 ID=cds-WP_000240546.1;Parent=gene-AD11_RS24430;Dbxref=GenBank:WP_000240546.1;Name=WP_000240546.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001606533.1;locus_tag=AD11_RS24430;product=carbamate kinase;protein_id=WP_000240546.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 72846 74270 . - . ID=gene-AD11_RS24435;Name=AD11_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24435;old_locus_tag=AD11_4291 NZ_JJLL01000158.1 Protein Homology CDS 72846 74270 . - 0 ID=cds-WP_033865858.1;Parent=gene-AD11_RS24435;Dbxref=GenBank:WP_033865858.1;Name=WP_033865858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093935.1;locus_tag=AD11_RS24435;product=DUF1116 domain-containing protein;protein_id=WP_033865858.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 74267 75826 . - . ID=gene-AD11_RS24440;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AD11_RS24440;old_locus_tag=AD11_4292 NZ_JJLL01000158.1 Protein Homology CDS 74267 75826 . - 0 ID=cds-WP_001618974.1;Parent=gene-AD11_RS24440;Dbxref=GenBank:WP_001618974.1;Name=WP_001618974.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000865643.1;locus_tag=AD11_RS24440;product=acyl-CoA synthetase FdrA;protein_id=WP_001618974.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 75921 76781 . - . ID=gene-AD11_RS24445;Name=AD11_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24445;old_locus_tag=AD11_4293 NZ_JJLL01000158.1 Protein Homology CDS 75921 76781 . - 0 ID=cds-WP_001301301.1;Parent=gene-AD11_RS24445;Dbxref=GenBank:WP_001301301.1;Name=WP_001301301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001374637.1;locus_tag=AD11_RS24445;product=DUF2877 domain-containing protein;protein_id=WP_001301301.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 76787 77455 . - . ID=gene-AD11_RS24450;Name=AD11_RS24450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24450;old_locus_tag=AD11_4294 NZ_JJLL01000158.1 Protein Homology CDS 76787 77455 . - 0 ID=cds-WP_000194414.1;Parent=gene-AD11_RS24450;Dbxref=GenBank:WP_000194414.1;Name=WP_000194414.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233690.1;locus_tag=AD11_RS24450;product=cysteine hydrolase family protein;protein_id=WP_000194414.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 77712 78521 . - . ID=gene-AD11_RS24460;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AD11_RS24460;old_locus_tag=AD11_4297 NZ_JJLL01000158.1 Protein Homology CDS 77712 78521 . - 0 ID=cds-WP_001298606.1;Parent=gene-AD11_RS24460;Dbxref=GenBank:WP_001298606.1;Name=WP_001298606.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001445784.1;locus_tag=AD11_RS24460;product=dienelactone hydrolase family protein;protein_id=WP_001298606.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 78783 79544 . + . ID=gene-AD11_RS24465;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AD11_RS24465;old_locus_tag=AD11_4298 NZ_JJLL01000158.1 Protein Homology CDS 78783 79544 . + 0 ID=cds-WP_000045177.1;Parent=gene-AD11_RS24465;Dbxref=GenBank:WP_000045177.1;Name=WP_000045177.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418275.1;locus_tag=AD11_RS24465;product=uridine phosphorylase;protein_id=WP_000045177.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 79685 81112 . + . ID=gene-AD11_RS24470;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AD11_RS24470;old_locus_tag=AD11_4299 NZ_JJLL01000158.1 Protein Homology CDS 79685 81112 . + 0 ID=cds-WP_000347714.1;Parent=gene-AD11_RS24470;Dbxref=GenBank:WP_000347714.1;Name=WP_000347714.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AD11_RS24470;product=DNA recombination protein RmuC;protein_id=WP_000347714.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 81207 81962 . + . ID=gene-AD11_RS24475;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AD11_RS24475;old_locus_tag=AD11_4300 NZ_JJLL01000158.1 Protein Homology CDS 81207 81962 . + 0 ID=cds-WP_000227958.1;Parent=gene-AD11_RS24475;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AD11_RS24475;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 81976 82581 . + . ID=gene-AD11_RS24480;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AD11_RS24480;old_locus_tag=AD11_4301 NZ_JJLL01000158.1 Protein Homology CDS 81976 82581 . + 0 ID=cds-WP_001295259.1;Parent=gene-AD11_RS24480;Dbxref=GenBank:WP_001295259.1;Name=WP_001295259.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AD11_RS24480;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 82578 84218 . + . ID=gene-AD11_RS24485;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AD11_RS24485;old_locus_tag=AD11_4302 NZ_JJLL01000158.1 Protein Homology CDS 82578 84218 . + 0 ID=cds-WP_000187530.1;Parent=gene-AD11_RS24485;Dbxref=GenBank:WP_000187530.1;Name=WP_000187530.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AD11_RS24485;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187530.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 84297 84566 . + . ID=gene-AD11_RS24490;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AD11_RS24490;old_locus_tag=AD11_4303 NZ_JJLL01000158.1 Protein Homology CDS 84297 84566 . + 0 ID=cds-WP_001295260.1;Parent=gene-AD11_RS24490;Dbxref=GenBank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AD11_RS24490;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 84570 85085 . + . ID=gene-AD11_RS24495;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AD11_RS24495;old_locus_tag=AD11_4304 NZ_JJLL01000158.1 Protein Homology CDS 84570 85085 . + 0 ID=cds-WP_000459594.1;Parent=gene-AD11_RS24495;Dbxref=GenBank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AD11_RS24495;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 85088 85864 . + . ID=gene-AD11_RS24500;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AD11_RS24500;old_locus_tag=AD11_4305 NZ_JJLL01000158.1 Protein Homology CDS 85088 85864 . + 0 ID=cds-WP_000109943.1;Parent=gene-AD11_RS24500;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AD11_RS24500;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 85906 86688 . + . ID=gene-AD11_RS24505;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AD11_RS24505;old_locus_tag=AD11_4306 NZ_JJLL01000158.1 Protein Homology CDS 85906 86688 . + 0 ID=cds-WP_000459630.1;Parent=gene-AD11_RS24505;Dbxref=GenBank:WP_000459630.1;Name=WP_000459630.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026271.1;locus_tag=AD11_RS24505;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_000459630.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 86685 87173 . - . ID=gene-AD11_RS24510;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AD11_RS24510;old_locus_tag=AD11_4307 NZ_JJLL01000158.1 Protein Homology CDS 86685 87173 . - 0 ID=cds-WP_001192396.1;Parent=gene-AD11_RS24510;Dbxref=GenBank:WP_001192396.1;Name=WP_001192396.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AD11_RS24510;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 87340 88833 . + . ID=gene-AD11_RS24515;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AD11_RS24515;old_locus_tag=AD11_4308 NZ_JJLL01000158.1 Protein Homology CDS 87340 88833 . + 0 ID=cds-WP_000339796.1;Parent=gene-AD11_RS24515;Dbxref=GenBank:WP_000339796.1;Name=WP_000339796.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709647.1;locus_tag=AD11_RS24515;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339796.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 88879 89580 . + . ID=gene-AD11_RS24520;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AD11_RS24520;old_locus_tag=AD11_4309 NZ_JJLL01000158.1 Protein Homology CDS 88879 89580 . + 0 ID=cds-WP_000209826.1;Parent=gene-AD11_RS24520;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AD11_RS24520;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 89863 91026 . - . ID=gene-AD11_RS24525;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AD11_RS24525;old_locus_tag=AD11_4310 NZ_JJLL01000158.1 Protein Homology CDS 89863 91026 . - 0 ID=cds-WP_000438725.1;Parent=gene-AD11_RS24525;Dbxref=GenBank:WP_000438725.1;Name=WP_000438725.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026272.1;locus_tag=AD11_RS24525;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438725.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 91036 93225 . - . ID=gene-AD11_RS24530;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AD11_RS24530;old_locus_tag=AD11_4311 NZ_JJLL01000158.1 Protein Homology CDS 91036 93225 . - 0 ID=cds-WP_000965936.1;Parent=gene-AD11_RS24530;Dbxref=GenBank:WP_000965936.1;Name=WP_000965936.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=AD11_RS24530;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_000965936.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 93415 94746 . + . ID=gene-AD11_RS24535;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AD11_RS24535;old_locus_tag=AD11_4312 NZ_JJLL01000158.1 Protein Homology CDS 93415 94746 . + 0 ID=cds-WP_001618978.1;Parent=gene-AD11_RS24535;Dbxref=GenBank:WP_001618978.1;Name=WP_001618978.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AD11_RS24535;product=Xaa-Pro dipeptidase;protein_id=WP_001618978.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 94746 95360 . + . ID=gene-AD11_RS24540;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=AD11_RS24540;old_locus_tag=AD11_4313 NZ_JJLL01000158.1 Protein Homology CDS 94746 95360 . + 0 ID=cds-WP_001618979.1;Parent=gene-AD11_RS24540;Dbxref=GenBank:WP_001618979.1;Name=WP_001618979.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418290.4;locus_tag=AD11_RS24540;product=IMPACT family protein;protein_id=WP_001618979.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 95399 96850 . + . ID=gene-AD11_RS24545;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AD11_RS24545;old_locus_tag=AD11_4314 NZ_JJLL01000158.1 Protein Homology CDS 95399 96850 . + 0 ID=cds-WP_000545677.1;Parent=gene-AD11_RS24545;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AD11_RS24545;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11 NZ_JJLL01000158.1 RefSeq gene 96862 97407 . + . ID=gene-AD11_RS24550;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AD11_RS24550;old_locus_tag=AD11_4315 NZ_JJLL01000158.1 Protein Homology CDS 96862 97407 . + 0 ID=cds-WP_000853959.1;Parent=gene-AD11_RS24550;Dbxref=GenBank:WP_000853959.1;Name=WP_000853959.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AD11_RS24550;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853959.1;transl_table=11 ##sequence-region NZ_JJLL01000159.1 1 124211 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000159.1 RefSeq region 1 124211 . + . ID=NZ_JJLL01000159.1:1..124211;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000159.1 RefSeq gene 1 102 . + . ID=gene-AD11_RS24555;Name=AD11_RS24555;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS24555;partial=true;start_range=.,1 NZ_JJLL01000159.1 cmsearch rRNA 1 102 . + . ID=rna-AD11_RS24555;Parent=gene-AD11_RS24555;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24555;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000159.1 cmsearch exon 1 102 . + . ID=exon-AD11_RS24555-1;Parent=rna-AD11_RS24555;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24555;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000159.1 RefSeq gene 291 406 . + . ID=gene-AD11_RS24560;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS24560;old_locus_tag=AD11_4316 NZ_JJLL01000159.1 cmsearch rRNA 291 406 . + . ID=rna-AD11_RS24560;Parent=gene-AD11_RS24560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24560;product=5S ribosomal RNA NZ_JJLL01000159.1 cmsearch exon 291 406 . + . ID=exon-AD11_RS24560-1;Parent=rna-AD11_RS24560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS24560;product=5S ribosomal RNA NZ_JJLL01000159.1 RefSeq gene 510 1037 . - . ID=gene-AD11_RS24565;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AD11_RS24565;old_locus_tag=AD11_4317 NZ_JJLL01000159.1 Protein Homology CDS 510 1037 . - 0 ID=cds-WP_000907622.1;Parent=gene-AD11_RS24565;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AD11_RS24565;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 1019 1603 . - . ID=gene-AD11_RS24570;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AD11_RS24570;old_locus_tag=AD11_4318 NZ_JJLL01000159.1 Protein Homology CDS 1019 1603 . - 0 ID=cds-WP_001052181.1;Parent=gene-AD11_RS24570;Dbxref=GenBank:WP_001052181.1;Name=WP_001052181.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418294.1;locus_tag=AD11_RS24570;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001052181.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 1673 1942 . + . ID=gene-AD11_RS24575;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=AD11_RS24575;old_locus_tag=AD11_4319 NZ_JJLL01000159.1 Protein Homology CDS 1673 1942 . + 0 ID=cds-WP_001295263.1;Parent=gene-AD11_RS24575;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AD11_RS24575;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 2019 3005 . + . ID=gene-AD11_RS24580;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AD11_RS24580;old_locus_tag=AD11_4320 NZ_JJLL01000159.1 Protein Homology CDS 2019 3005 . + 0 ID=cds-WP_001065497.1;Parent=gene-AD11_RS24580;Dbxref=GenBank:WP_001065497.1;Name=WP_001065497.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418296.1;locus_tag=AD11_RS24580;product=stress response kinase SrkA;protein_id=WP_001065497.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 3022 3648 . + . ID=gene-AD11_RS24585;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AD11_RS24585;old_locus_tag=AD11_4321 NZ_JJLL01000159.1 Protein Homology CDS 3022 3648 . + 0 ID=cds-WP_000725337.1;Parent=gene-AD11_RS24585;Dbxref=GenBank:WP_000725337.1;Name=WP_000725337.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AD11_RS24585;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11 NZ_JJLL01000159.1 RefSeq pseudogene 3803 5232 . + . ID=gene-AD11_RS24590;Name=yihF;gbkey=Gene;gene=yihF;gene_biotype=pseudogene;locus_tag=AD11_RS24590;pseudo=true NZ_JJLL01000159.1 Protein Homology CDS 3803 5232 . + 0 ID=cds-AD11_RS24590;Parent=gene-AD11_RS24590;Note=frameshifted;gbkey=CDS;gene=yihF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312811.2;locus_tag=AD11_RS24590;product=YdgA family protein;pseudo=true;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 5273 6205 . - . ID=gene-AD11_RS24595;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=AD11_RS24595;old_locus_tag=AD11_4325 NZ_JJLL01000159.1 Protein Homology CDS 5273 6205 . - 0 ID=cds-WP_001618982.1;Parent=gene-AD11_RS24595;Dbxref=GenBank:WP_001618982.1;Name=WP_001618982.1;Ontology_term=GO:0016746;gbkey=CDS;gene=yihG;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=AD11_RS24595;product=acyltransferase;protein_id=WP_001618982.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 6569 9355 . + . ID=gene-AD11_RS24605;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AD11_RS24605;old_locus_tag=AD11_4327 NZ_JJLL01000159.1 Protein Homology CDS 6569 9355 . + 0 ID=cds-WP_001618985.1;Parent=gene-AD11_RS24605;Dbxref=GenBank:WP_001618985.1;Name=WP_001618985.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=AD11_RS24605;product=DNA polymerase I;protein_id=WP_001618985.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 9737 10369 . - . ID=gene-AD11_RS24610;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AD11_RS24610;old_locus_tag=AD11_4329 NZ_JJLL01000159.1 Protein Homology CDS 9737 10369 . - 0 ID=cds-WP_000183349.1;Parent=gene-AD11_RS24610;Dbxref=GenBank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AD11_RS24610;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11 NZ_JJLL01000159.1 RefSeq pseudogene 10666 10832 . + . ID=gene-AD11_RS32780;Name=AD11_RS32780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32780;pseudo=true NZ_JJLL01000159.1 Protein Homology CDS 10666 10832 . + 0 ID=cds-AD11_RS32780;Parent=gene-AD11_RS32780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AD11_RS32780;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 10951 11460 . + . ID=gene-AD11_RS24615;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AD11_RS24615;old_locus_tag=AD11_4330 NZ_JJLL01000159.1 Protein Homology CDS 10951 11460 . + 0 ID=cds-WP_001295266.1;Parent=gene-AD11_RS24615;Dbxref=GenBank:WP_001295266.1;Name=WP_001295266.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418302.1;locus_tag=AD11_RS24615;product=Der GTPase-activating protein YihI;protein_id=WP_001295266.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 11649 13022 . + . ID=gene-AD11_RS24620;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AD11_RS24620;old_locus_tag=AD11_4332 NZ_JJLL01000159.1 Protein Homology CDS 11649 13022 . + 0 ID=cds-WP_000116090.1;Parent=gene-AD11_RS24620;Dbxref=GenBank:WP_000116090.1;Name=WP_000116090.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AD11_RS24620;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000116090.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 13251 13361 . - . ID=gene-AD11_RS24625;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AD11_RS24625 NZ_JJLL01000159.1 Protein Homology CDS 13251 13361 . - 0 ID=cds-WP_000893994.1;Parent=gene-AD11_RS24625;Dbxref=GenBank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AD11_RS24625;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 13473 14882 . - . ID=gene-AD11_RS24630;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AD11_RS24630;old_locus_tag=AD11_4335 NZ_JJLL01000159.1 Protein Homology CDS 13473 14882 . - 0 ID=cds-WP_001188776.1;Parent=gene-AD11_RS24630;Dbxref=GenBank:WP_001188776.1;Name=WP_001188776.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AD11_RS24630;product=nitrogen regulation protein NR(I);protein_id=WP_001188776.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 14894 15943 . - . ID=gene-AD11_RS24635;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AD11_RS24635;old_locus_tag=AD11_4336 NZ_JJLL01000159.1 Protein Homology CDS 14894 15943 . - 0 ID=cds-WP_000190577.1;Parent=gene-AD11_RS24635;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AD11_RS24635;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 16229 17638 . - . ID=gene-AD11_RS24640;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AD11_RS24640;old_locus_tag=AD11_4337 NZ_JJLL01000159.1 Protein Homology CDS 16229 17638 . - 0 ID=cds-WP_001271717.1;Parent=gene-AD11_RS24640;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AD11_RS24640;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 18011 19834 . + . ID=gene-AD11_RS24650;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AD11_RS24650;old_locus_tag=AD11_4338 NZ_JJLL01000159.1 Protein Homology CDS 18011 19834 . + 0 ID=cds-WP_000570668.1;Parent=gene-AD11_RS24650;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AD11_RS24650;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 20051 20761 . + . ID=gene-AD11_RS24655;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=AD11_RS24655;old_locus_tag=AD11_4339 NZ_JJLL01000159.1 Protein Homology CDS 20051 20761 . + 0 ID=cds-WP_000147429.1;Parent=gene-AD11_RS24655;Dbxref=GenBank:WP_000147429.1;Name=WP_000147429.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yihL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AD11_RS24655;product=GntR family transcriptional regulator;protein_id=WP_000147429.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 20769 21749 . + . ID=gene-AD11_RS24660;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;locus_tag=AD11_RS24660;old_locus_tag=AD11_4340 NZ_JJLL01000159.1 Protein Homology CDS 20769 21749 . + 0 ID=cds-WP_033865860.1;Parent=gene-AD11_RS24660;Dbxref=GenBank:WP_033865860.1;Name=WP_033865860.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=yihM;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=AD11_RS24660;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_033865860.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 21851 23116 . + . ID=gene-AD11_RS24665;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;locus_tag=AD11_RS24665;old_locus_tag=AD11_4341 NZ_JJLL01000159.1 Protein Homology CDS 21851 23116 . + 0 ID=cds-WP_000956312.1;Parent=gene-AD11_RS24665;Dbxref=GenBank:WP_000956312.1;Name=WP_000956312.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yihN;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418310.1;locus_tag=AD11_RS24665;product=MFS transporter;protein_id=WP_000956312.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 23227 24015 . - . ID=gene-AD11_RS24670;Name=AD11_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24670;old_locus_tag=AD11_4342 NZ_JJLL01000159.1 Protein Homology CDS 23227 24015 . - 0 ID=cds-WP_001618987.1;Parent=gene-AD11_RS24670;Dbxref=GenBank:WP_001618987.1;Name=WP_001618987.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022208.1;locus_tag=AD11_RS24670;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001618987.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 24055 24951 . - . ID=gene-AD11_RS24675;Name=AD11_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24675;old_locus_tag=AD11_4343 NZ_JJLL01000159.1 Protein Homology CDS 24055 24951 . - 0 ID=cds-WP_033865864.1;Parent=gene-AD11_RS24675;Dbxref=GenBank:WP_033865864.1;Name=WP_033865864.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196715.1;locus_tag=AD11_RS24675;product=sugar kinase;protein_id=WP_033865864.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 25184 26002 . + . ID=gene-AD11_RS24680;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AD11_RS24680;old_locus_tag=AD11_4345 NZ_JJLL01000159.1 Protein Homology CDS 25184 26002 . + 0 ID=cds-WP_248784886.1;Parent=gene-AD11_RS24680;Dbxref=GenBank:WP_248784886.1;Name=WP_248784886.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012005.0;locus_tag=AD11_RS24680;product=sulfolactaldehyde 3-reductase;protein_id=WP_248784886.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 26027 26914 . + . ID=gene-AD11_RS24685;Name=AD11_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24685;old_locus_tag=AD11_4346 NZ_JJLL01000159.1 Protein Homology CDS 26027 26914 . + 0 ID=cds-WP_000094544.1;Parent=gene-AD11_RS24685;Dbxref=GenBank:WP_000094544.1;Name=WP_000094544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000094541.1;locus_tag=AD11_RS24685;product=aldolase;protein_id=WP_000094544.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 26947 27957 . + . ID=gene-AD11_RS24690;Name=AD11_RS24690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24690;old_locus_tag=AD11_4347 NZ_JJLL01000159.1 Protein Homology CDS 26947 27957 . + 0 ID=cds-WP_033865865.1;Parent=gene-AD11_RS24690;Dbxref=GenBank:WP_033865865.1;Name=WP_033865865.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001494590.1;locus_tag=AD11_RS24690;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_033865865.1;transl_table=11 NZ_JJLL01000159.1 RefSeq pseudogene 28027 29459 . + . ID=gene-AD11_RS24695;Name=AD11_RS24695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS24695;old_locus_tag=AD11_4348;pseudo=true NZ_JJLL01000159.1 Protein Homology CDS 28027 29459 . + 0 ID=cds-AD11_RS24695;Parent=gene-AD11_RS24695;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246439.1;locus_tag=AD11_RS24695;product=MFS transporter;pseudo=true;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 29558 30907 . + . ID=gene-AD11_RS24700;Name=AD11_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24700;old_locus_tag=AD11_4350 NZ_JJLL01000159.1 Protein Homology CDS 29558 30907 . + 0 ID=cds-WP_001291190.1;Parent=gene-AD11_RS24700;Dbxref=GenBank:WP_001291190.1;Name=WP_001291190.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291189.1;locus_tag=AD11_RS24700;product=MFS transporter;protein_id=WP_001291190.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 30897 31784 . + . ID=gene-AD11_RS24705;Name=AD11_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS24705;old_locus_tag=AD11_4351 NZ_JJLL01000159.1 Protein Homology CDS 30897 31784 . + 0 ID=cds-WP_033866542.1;Parent=gene-AD11_RS24705;Dbxref=GenBank:WP_033866542.1;Name=WP_033866542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309103.1;locus_tag=AD11_RS24705;product=aldose 1-epimerase;protein_id=WP_033866542.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 31925 32524 . + . ID=gene-AD11_RS24710;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AD11_RS24710;old_locus_tag=AD11_4352 NZ_JJLL01000159.1 Protein Homology CDS 31925 32524 . + 0 ID=cds-WP_001295269.1;Parent=gene-AD11_RS24710;Dbxref=GenBank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=AD11_RS24710;product=glucose-1-phosphatase;protein_id=WP_001295269.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 32518 33390 . + . ID=gene-AD11_RS24715;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AD11_RS24715;old_locus_tag=AD11_4353 NZ_JJLL01000159.1 Protein Homology CDS 32518 33390 . + 0 ID=cds-WP_000920762.1;Parent=gene-AD11_RS24715;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AD11_RS24715;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 33387 33824 . + . ID=gene-AD11_RS24720;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AD11_RS24720;old_locus_tag=AD11_4354 NZ_JJLL01000159.1 Protein Homology CDS 33387 33824 . + 0 ID=cds-WP_000560983.1;Parent=gene-AD11_RS24720;Dbxref=GenBank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AD11_RS24720;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 33869 34810 . + . ID=gene-AD11_RS24725;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AD11_RS24725;old_locus_tag=AD11_4355 NZ_JJLL01000159.1 Protein Homology CDS 33869 34810 . + 0 ID=cds-WP_001297068.1;Parent=gene-AD11_RS24725;Dbxref=GenBank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AD11_RS24725;product=fatty acid biosynthesis protein FabY;protein_id=WP_001297068.1;transl_table=11 NZ_JJLL01000159.1 RefSeq pseudogene 35170 35286 . + . ID=gene-AD11_RS33235;Name=AD11_RS33235;end_range=35286,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33235;partial=true;pseudo=true NZ_JJLL01000159.1 Protein Homology CDS 35170 35286 . + 0 ID=cds-AD11_RS33235;Parent=gene-AD11_RS33235;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=35286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904967.1;locus_tag=AD11_RS33235;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 35663 35881 . + . ID=gene-AD11_RS24730;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=AD11_RS24730;old_locus_tag=AD11_4356 NZ_JJLL01000159.1 Protein Homology CDS 35663 35881 . + 0 ID=cds-WP_001295676.1;Parent=gene-AD11_RS24730;Dbxref=GenBank:WP_001295676.1;Name=WP_001295676.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;gene=yiiE;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AD11_RS24730;product=CopG family transcriptional regulator;protein_id=WP_001295676.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 36099 36341 . + . ID=gene-AD11_RS24735;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AD11_RS24735;old_locus_tag=AD11_4357 NZ_JJLL01000159.1 Protein Homology CDS 36099 36341 . + 0 ID=cds-WP_001086388.1;Parent=gene-AD11_RS24735;Dbxref=GenBank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AD11_RS24735;product=protein YiiF;protein_id=WP_001086388.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 36671 37600 . - . ID=gene-AD11_RS24745;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AD11_RS24745;old_locus_tag=AD11_4358 NZ_JJLL01000159.1 Protein Homology CDS 36671 37600 . - 0 ID=cds-WP_000027705.1;Parent=gene-AD11_RS24745;Dbxref=GenBank:WP_000027705.1;Name=WP_000027705.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AD11_RS24745;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027705.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 37597 38232 . - . ID=gene-AD11_RS24750;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AD11_RS24750;old_locus_tag=AD11_4359 NZ_JJLL01000159.1 Protein Homology CDS 37597 38232 . - 0 ID=cds-WP_000829013.1;Parent=gene-AD11_RS24750;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AD11_RS24750;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 38229 39131 . - . ID=gene-AD11_RS24755;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AD11_RS24755;old_locus_tag=AD11_4360 NZ_JJLL01000159.1 Protein Homology CDS 38229 39131 . - 0 ID=cds-WP_000331377.1;Parent=gene-AD11_RS24755;Dbxref=GenBank:WP_000331377.1;Name=WP_000331377.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AD11_RS24755;product=formate dehydrogenase O subunit beta;protein_id=WP_000331377.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 39144 42194 . - . ID=gene-AD11_RS24760;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AD11_RS24760;old_locus_tag=AD11_4361 NZ_JJLL01000159.1 Protein Homology CDS 39144 42194 . - 0 ID=cds-WP_077747113.1;Parent=gene-AD11_RS24760;Dbxref=GenBank:WP_077747113.1;Name=WP_077747113.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AD11_RS24760;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077747113.1;transl_except=(pos:complement(41607..41609)%2Caa:Sec);transl_table=11 NZ_JJLL01000159.1 RefSeq gene 42388 43221 . + . ID=gene-AD11_RS24770;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AD11_RS24770;old_locus_tag=AD11_4364 NZ_JJLL01000159.1 Protein Homology CDS 42388 43221 . + 0 ID=cds-WP_000753617.1;Parent=gene-AD11_RS24770;Dbxref=GenBank:WP_000753617.1;Name=WP_000753617.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AD11_RS24770;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753617.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 43374 44429 . + . ID=gene-AD11_RS24775;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=AD11_RS24775;old_locus_tag=AD11_4365 NZ_JJLL01000159.1 Protein Homology CDS 43374 44429 . + 0 ID=cds-WP_001295677.1;Parent=gene-AD11_RS24775;Dbxref=GenBank:WP_001295677.1;Name=WP_001295677.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AD11_RS24775;product=YiiG family protein;protein_id=WP_001295677.1;transl_table=11 NZ_JJLL01000159.1 RefSeq pseudogene 44479 45528 . - . ID=gene-AD11_RS24780;Name=AD11_RS24780;end_range=45528,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS24780;old_locus_tag=AD11_4366;partial=true;pseudo=true NZ_JJLL01000159.1 Protein Homology CDS 44479 45528 . - 0 ID=cds-AD11_RS24780;Parent=gene-AD11_RS24780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=45528,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=AD11_RS24780;partial=true;product=putative frv operon regulatory protein;pseudo=true;transl_table=11 NZ_JJLL01000159.1 RefSeq pseudogene 45527 46735 . - . ID=gene-AD11_RS24785;Name=AD11_RS24785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS24785;old_locus_tag=AD11_4367;partial=true;pseudo=true;start_range=.,45527 NZ_JJLL01000159.1 Protein Homology CDS 45527 46735 . - 0 ID=cds-AD11_RS24785;Parent=gene-AD11_RS24785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=AD11_RS24785;partial=true;product=putative frv operon regulatory protein;pseudo=true;start_range=.,45527;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 46735 47805 . - . ID=gene-AD11_RS24790;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=AD11_RS24790;old_locus_tag=AD11_4368 NZ_JJLL01000159.1 Protein Homology CDS 46735 47805 . - 0 ID=cds-WP_001019484.1;Parent=gene-AD11_RS24790;Dbxref=GenBank:WP_001019484.1;Name=WP_001019484.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418334.1;locus_tag=AD11_RS24790;product=aminopeptidase;protein_id=WP_001019484.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 47795 49246 . - . ID=gene-AD11_RS24795;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=AD11_RS24795;old_locus_tag=AD11_4369 NZ_JJLL01000159.1 Protein Homology CDS 47795 49246 . - 0 ID=cds-WP_000446022.1;Parent=gene-AD11_RS24795;Dbxref=GenBank:WP_000446022.1;Name=WP_000446022.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AD11_RS24795;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_000446022.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 49257 49703 . - . ID=gene-AD11_RS24800;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=AD11_RS24800;old_locus_tag=AD11_4370 NZ_JJLL01000159.1 Protein Homology CDS 49257 49703 . - 0 ID=cds-WP_000729595.1;Parent=gene-AD11_RS24800;Dbxref=GenBank:WP_000729595.1;Name=WP_000729595.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418336.1;locus_tag=AD11_RS24800;product=PTS fructose transporter subunit IIA;protein_id=WP_000729595.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 50004 50318 . - . ID=gene-AD11_RS24805;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AD11_RS24805;old_locus_tag=AD11_4371 NZ_JJLL01000159.1 Protein Homology CDS 50004 50318 . - 0 ID=cds-WP_000619493.1;Parent=gene-AD11_RS24805;Dbxref=GenBank:WP_000619493.1;Name=WP_000619493.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=AD11_RS24805;product=L-rhamnose mutarotase;protein_id=WP_000619493.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 50328 51152 . - . ID=gene-AD11_RS24810;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AD11_RS24810;old_locus_tag=AD11_4372 NZ_JJLL01000159.1 Protein Homology CDS 50328 51152 . - 0 ID=cds-WP_001618991.1;Parent=gene-AD11_RS24810;Dbxref=GenBank:WP_001618991.1;Name=WP_001618991.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418338.1;locus_tag=AD11_RS24810;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001618991.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 51511 52770 . - . ID=gene-AD11_RS24815;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AD11_RS24815;old_locus_tag=AD11_4373 NZ_JJLL01000159.1 Protein Homology CDS 51511 52770 . - 0 ID=cds-WP_001311268.1;Parent=gene-AD11_RS24815;Dbxref=GenBank:WP_001311268.1;Name=WP_001311268.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=AD11_RS24815;product=L-rhamnose isomerase;protein_id=WP_001311268.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 52767 54236 . - . ID=gene-AD11_RS24820;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AD11_RS24820;old_locus_tag=AD11_4374 NZ_JJLL01000159.1 Protein Homology CDS 52767 54236 . - 0 ID=cds-WP_033865869.1;Parent=gene-AD11_RS24820;Dbxref=GenBank:WP_033865869.1;Name=WP_033865869.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418340.1;locus_tag=AD11_RS24820;product=rhamnulokinase;protein_id=WP_033865869.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 54524 55360 . + . ID=gene-AD11_RS24830;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AD11_RS24830;old_locus_tag=AD11_4376 NZ_JJLL01000159.1 Protein Homology CDS 54524 55360 . + 0 ID=cds-WP_000217137.1;Parent=gene-AD11_RS24830;Dbxref=GenBank:WP_000217137.1;Name=WP_000217137.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AD11_RS24830;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217137.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 55434 56282 . + . ID=gene-AD11_RS24835;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AD11_RS24835;old_locus_tag=AD11_4377 NZ_JJLL01000159.1 Protein Homology CDS 55434 56282 . + 0 ID=cds-WP_001336056.1;Parent=gene-AD11_RS24835;Dbxref=GenBank:WP_001336056.1;Name=WP_001336056.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AD11_RS24835;product=HTH-type transcriptional activator RhaR;protein_id=WP_001336056.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 56279 57313 . - . ID=gene-AD11_RS24840;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AD11_RS24840;old_locus_tag=AD11_4378 NZ_JJLL01000159.1 Protein Homology CDS 56279 57313 . - 0 ID=cds-WP_000063517.1;Parent=gene-AD11_RS24840;Dbxref=GenBank:WP_000063517.1;Name=WP_000063517.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AD11_RS24840;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063517.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 57598 58218 . + . ID=gene-AD11_RS24845;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AD11_RS24845;old_locus_tag=AD11_4379 NZ_JJLL01000159.1 Protein Homology CDS 57598 58218 . + 0 ID=cds-WP_000122641.1;Parent=gene-AD11_RS24845;Dbxref=GenBank:WP_000122641.1;Name=WP_000122641.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AD11_RS24845;product=superoxide dismutase [Mn];protein_id=WP_000122641.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 58478 59461 . + . ID=gene-AD11_RS24855;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AD11_RS24855;old_locus_tag=AD11_4381 NZ_JJLL01000159.1 Protein Homology CDS 58478 59461 . + 0 ID=cds-WP_001166063.1;Parent=gene-AD11_RS24855;Dbxref=GenBank:WP_001166063.1;Name=WP_001166063.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AD11_RS24855;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001166063.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 59610 60284 . + . ID=gene-AD11_RS24860;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AD11_RS24860;old_locus_tag=AD11_4382 NZ_JJLL01000159.1 Protein Homology CDS 59610 60284 . + 0 ID=cds-WP_001270260.1;Parent=gene-AD11_RS24860;Dbxref=GenBank:WP_001270260.1;Name=WP_001270260.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AD11_RS24860;product=6-hydroxyaminopurine reductase;protein_id=WP_001270260.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 60390 61763 . - . ID=gene-AD11_RS24865;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AD11_RS24865;old_locus_tag=AD11_4383 NZ_JJLL01000159.1 Protein Homology CDS 60390 61763 . - 0 ID=cds-WP_000580417.1;Parent=gene-AD11_RS24865;Dbxref=GenBank:WP_000580417.1;Name=WP_000580417.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AD11_RS24865;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580417.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 61760 62458 . - . ID=gene-AD11_RS24870;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AD11_RS24870;old_locus_tag=AD11_4384 NZ_JJLL01000159.1 Protein Homology CDS 61760 62458 . - 0 ID=cds-WP_001033722.1;Parent=gene-AD11_RS24870;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AD11_RS24870;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 62608 63108 . + . ID=gene-AD11_RS24875;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AD11_RS24875;old_locus_tag=AD11_4385 NZ_JJLL01000159.1 Protein Homology CDS 62608 63108 . + 0 ID=cds-WP_001223800.1;Parent=gene-AD11_RS24875;Dbxref=GenBank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AD11_RS24875;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 63257 64159 . + . ID=gene-AD11_RS24880;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AD11_RS24880;old_locus_tag=AD11_4386 NZ_JJLL01000159.1 Protein Homology CDS 63257 64159 . + 0 ID=cds-WP_001076742.1;Parent=gene-AD11_RS24880;Dbxref=GenBank:WP_001076742.1;Name=WP_001076742.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312867.1;locus_tag=AD11_RS24880;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076742.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 64340 65302 . + . ID=gene-AD11_RS24885;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AD11_RS24885;old_locus_tag=AD11_4387 NZ_JJLL01000159.1 Protein Homology CDS 64340 65302 . + 0 ID=cds-WP_000591795.1;Parent=gene-AD11_RS24885;Dbxref=GenBank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AD11_RS24885;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 65622 66611 . + . ID=gene-AD11_RS24890;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AD11_RS24890;old_locus_tag=AD11_4388 NZ_JJLL01000159.1 Protein Homology CDS 65622 66611 . + 0 ID=cds-WP_001045689.1;Parent=gene-AD11_RS24890;Dbxref=GenBank:WP_001045689.1;Name=WP_001045689.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AD11_RS24890;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045689.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 66718 67473 . + . ID=gene-AD11_RS24895;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AD11_RS24895;old_locus_tag=AD11_4389 NZ_JJLL01000159.1 Protein Homology CDS 66718 67473 . + 0 ID=cds-WP_001351967.1;Parent=gene-AD11_RS24895;Dbxref=GenBank:WP_001351967.1;Name=WP_001351967.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312870.1;locus_tag=AD11_RS24895;product=CDP-diacylglycerol diphosphatase;protein_id=WP_001351967.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 67528 68295 . - . ID=gene-AD11_RS24900;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AD11_RS24900;old_locus_tag=AD11_4390 NZ_JJLL01000159.1 Protein Homology CDS 67528 68295 . - 0 ID=cds-WP_001216325.1;Parent=gene-AD11_RS24900;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AD11_RS24900;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 68403 69002 . - . ID=gene-AD11_RS24905;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AD11_RS24905;old_locus_tag=AD11_4391 NZ_JJLL01000159.1 Protein Homology CDS 68403 69002 . - 0 ID=cds-WP_000802214.1;Parent=gene-AD11_RS24905;Dbxref=GenBank:WP_000802214.1;Name=WP_000802214.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AD11_RS24905;product=YiiQ family protein;protein_id=WP_000802214.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 69103 69543 . + . ID=gene-AD11_RS24910;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AD11_RS24910;old_locus_tag=AD11_4392 NZ_JJLL01000159.1 Protein Homology CDS 69103 69543 . + 0 ID=cds-WP_000155257.1;Parent=gene-AD11_RS24910;Dbxref=GenBank:WP_000155257.1;Name=WP_000155257.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AD11_RS24910;product=DUF805 domain-containing protein;protein_id=WP_000155257.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 69755 70054 . + . ID=gene-AD11_RS24915;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AD11_RS24915;old_locus_tag=AD11_4393 NZ_JJLL01000159.1 Protein Homology CDS 69755 70054 . + 0 ID=cds-WP_000655989.1;Parent=gene-AD11_RS24915;Dbxref=GenBank:WP_000655989.1;Name=WP_000655989.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418357.1;locus_tag=AD11_RS24915;product=DUF406 domain-containing protein;protein_id=WP_000655989.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 70081 70509 . + . ID=gene-AD11_RS24920;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AD11_RS24920;old_locus_tag=AD11_4394 NZ_JJLL01000159.1 Protein Homology CDS 70081 70509 . + 0 ID=cds-WP_000323556.1;Parent=gene-AD11_RS24920;Dbxref=GenBank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AD11_RS24920;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 70514 71260 . - . ID=gene-AD11_RS24925;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AD11_RS24925;old_locus_tag=AD11_4395 NZ_JJLL01000159.1 Protein Homology CDS 70514 71260 . - 0 ID=cds-WP_000796332.1;Parent=gene-AD11_RS24925;Dbxref=GenBank:WP_000796332.1;Name=WP_000796332.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418359.1;locus_tag=AD11_RS24925;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796332.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 71357 72367 . - . ID=gene-AD11_RS24930;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AD11_RS24930;old_locus_tag=AD11_4396 NZ_JJLL01000159.1 Protein Homology CDS 71357 72367 . - 0 ID=cds-WP_033865870.1;Parent=gene-AD11_RS24930;Dbxref=GenBank:WP_033865870.1;Name=WP_033865870.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AD11_RS24930;product=class II fructose-bisphosphatase;protein_id=WP_033865870.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 72502 74010 . - . ID=gene-AD11_RS24935;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AD11_RS24935;old_locus_tag=AD11_4397 NZ_JJLL01000159.1 Protein Homology CDS 72502 74010 . - 0 ID=cds-WP_000136788.1;Parent=gene-AD11_RS24935;Dbxref=GenBank:WP_000136788.1;Name=WP_000136788.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AD11_RS24935;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 74033 74878 . - . ID=gene-AD11_RS24940;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AD11_RS24940;old_locus_tag=AD11_4398 NZ_JJLL01000159.1 Protein Homology CDS 74033 74878 . - 0 ID=cds-WP_000084268.1;Parent=gene-AD11_RS24940;Dbxref=GenBank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AD11_RS24940;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 75303 75548 . + . ID=gene-AD11_RS24945;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AD11_RS24945;old_locus_tag=AD11_4399 NZ_JJLL01000159.1 Protein Homology CDS 75303 75548 . + 0 ID=cds-WP_001296623.1;Parent=gene-AD11_RS24945;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AD11_RS24945;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 75633 76118 . - . ID=gene-AD11_RS24950;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AD11_RS24950;old_locus_tag=AD11_4400 NZ_JJLL01000159.1 Protein Homology CDS 75633 76118 . - 0 ID=cds-WP_000872908.1;Parent=gene-AD11_RS24950;Dbxref=GenBank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AD11_RS24950;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 76211 77137 . - . ID=gene-AD11_RS24955;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AD11_RS24955;old_locus_tag=AD11_4401 NZ_JJLL01000159.1 Protein Homology CDS 76211 77137 . - 0 ID=cds-WP_000139496.1;Parent=gene-AD11_RS24955;Dbxref=GenBank:WP_000139496.1;Name=WP_000139496.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AD11_RS24955;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_000139496.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 77204 78535 . - . ID=gene-AD11_RS24960;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AD11_RS24960;old_locus_tag=AD11_4402 NZ_JJLL01000159.1 Protein Homology CDS 77204 78535 . - 0 ID=cds-WP_001293341.1;Parent=gene-AD11_RS24960;Dbxref=GenBank:WP_001293341.1;Name=WP_001293341.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AD11_RS24960;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293341.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 78545 79075 . - . ID=gene-AD11_RS24965;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AD11_RS24965;old_locus_tag=AD11_4403 NZ_JJLL01000159.1 Protein Homology CDS 78545 79075 . - 0 ID=cds-WP_000208242.1;Parent=gene-AD11_RS24965;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AD11_RS24965;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 79168 80127 . - . ID=gene-AD11_RS24970;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AD11_RS24970;old_locus_tag=AD11_4404 NZ_JJLL01000159.1 Protein Homology CDS 79168 80127 . - 0 ID=cds-WP_000068828.1;Parent=gene-AD11_RS24970;Dbxref=GenBank:WP_000068828.1;Name=WP_000068828.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418368.1;locus_tag=AD11_RS24970;product=cell division protein FtsN;protein_id=WP_000068828.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 80219 81244 . - . ID=gene-AD11_RS24975;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AD11_RS24975;old_locus_tag=AD11_4405 NZ_JJLL01000159.1 Protein Homology CDS 80219 81244 . - 0 ID=cds-WP_000644904.1;Parent=gene-AD11_RS24975;Dbxref=GenBank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AD11_RS24975;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 81400 83598 . - . ID=gene-AD11_RS24980;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AD11_RS24980;old_locus_tag=AD11_4407 NZ_JJLL01000159.1 Protein Homology CDS 81400 83598 . - 0 ID=cds-WP_001301269.1;Parent=gene-AD11_RS24980;Dbxref=GenBank:WP_001301269.1;Name=WP_001301269.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AD11_RS24980;product=primosomal protein N';protein_id=WP_001301269.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 83801 84013 . + . ID=gene-AD11_RS24985;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AD11_RS24985;old_locus_tag=AD11_4408 NZ_JJLL01000159.1 Protein Homology CDS 83801 84013 . + 0 ID=cds-WP_000710769.1;Parent=gene-AD11_RS24985;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AD11_RS24985;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 84074 84682 . - . ID=gene-AD11_RS24990;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AD11_RS24990;old_locus_tag=AD11_4409 NZ_JJLL01000159.1 Protein Homology CDS 84074 84682 . - 0 ID=cds-WP_000797353.1;Parent=gene-AD11_RS24990;Dbxref=GenBank:WP_000797353.1;Name=WP_000797353.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418372.1;locus_tag=AD11_RS24990;product=YiiX family permuted papain-like enzyme;protein_id=WP_000797353.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 84866 85183 . - . ID=gene-AD11_RS24995;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AD11_RS24995;old_locus_tag=AD11_4410 NZ_JJLL01000159.1 Protein Homology CDS 84866 85183 . - 0 ID=cds-WP_000852812.1;Parent=gene-AD11_RS24995;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AD11_RS24995;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 85460 86620 . + . ID=gene-AD11_RS25000;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AD11_RS25000;old_locus_tag=AD11_4411 NZ_JJLL01000159.1 Protein Homology CDS 85460 86620 . + 0 ID=cds-WP_001301270.1;Parent=gene-AD11_RS25000;Dbxref=GenBank:WP_001301270.1;Name=WP_001301270.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AD11_RS25000;product=cystathionine gamma-synthase;protein_id=WP_001301270.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 86623 89055 . + . ID=gene-AD11_RS25005;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AD11_RS25005;old_locus_tag=AD11_4412 NZ_JJLL01000159.1 Protein Homology CDS 86623 89055 . + 0 ID=cds-WP_000110748.1;Parent=gene-AD11_RS25005;Dbxref=GenBank:WP_000110748.1;Name=WP_000110748.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AD11_RS25005;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110748.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 89194 89328 . - . ID=gene-AD11_RS32960;Name=AD11_RS32960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32960;old_locus_tag=AD11_4413 NZ_JJLL01000159.1 GeneMarkS-2+ CDS 89194 89328 . - 0 ID=cds-WP_000660586.1;Parent=gene-AD11_RS32960;Dbxref=GenBank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32960;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 89404 90294 . + . ID=gene-AD11_RS25015;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AD11_RS25015;old_locus_tag=AD11_4414 NZ_JJLL01000159.1 Protein Homology CDS 89404 90294 . + 0 ID=cds-WP_000007523.1;Parent=gene-AD11_RS25015;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AD11_RS25015;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 90623 92803 . + . ID=gene-AD11_RS25020;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AD11_RS25020;old_locus_tag=AD11_4415 NZ_JJLL01000159.1 Protein Homology CDS 90623 92803 . + 0 ID=cds-WP_001295695.1;Parent=gene-AD11_RS25020;Dbxref=GenBank:WP_001295695.1;Name=WP_001295695.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418377.1;locus_tag=AD11_RS25020;product=catalase/peroxidase HPI;protein_id=WP_001295695.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 92896 93801 . + . ID=gene-AD11_RS25025;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AD11_RS25025;old_locus_tag=AD11_4416 NZ_JJLL01000159.1 Protein Homology CDS 92896 93801 . + 0 ID=cds-WP_001271242.1;Parent=gene-AD11_RS25025;Dbxref=GenBank:WP_001271242.1;Name=WP_001271242.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AD11_RS25025;product=cystine transporter YijE;protein_id=WP_001271242.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 93828 94445 . - . ID=gene-AD11_RS25030;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AD11_RS25030;old_locus_tag=AD11_4417 NZ_JJLL01000159.1 Protein Homology CDS 93828 94445 . - 0 ID=cds-WP_032177704.1;Parent=gene-AD11_RS25030;Dbxref=GenBank:WP_032177704.1;Name=WP_032177704.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AD11_RS25030;product=DUF1287 domain-containing protein;protein_id=WP_032177704.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 94720 95823 . - . ID=gene-AD11_RS25040;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AD11_RS25040;old_locus_tag=AD11_4418 NZ_JJLL01000159.1 Protein Homology CDS 94720 95823 . - 0 ID=cds-WP_000374004.1;Parent=gene-AD11_RS25040;Dbxref=GenBank:WP_000374004.1;Name=WP_000374004.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AD11_RS25040;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 95834 96496 . - . ID=gene-AD11_RS25045;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AD11_RS25045;old_locus_tag=AD11_4419 NZ_JJLL01000159.1 Protein Homology CDS 95834 96496 . - 0 ID=cds-WP_000424841.1;Parent=gene-AD11_RS25045;Dbxref=GenBank:WP_000424841.1;Name=WP_000424841.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418381.1;locus_tag=AD11_RS25045;product=fructose-6-phosphate aldolase;protein_id=WP_000424841.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 96508 99009 . - . ID=gene-AD11_RS25050;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AD11_RS25050;old_locus_tag=AD11_4420 NZ_JJLL01000159.1 Protein Homology CDS 96508 99009 . - 0 ID=cds-WP_001185138.1;Parent=gene-AD11_RS25050;Dbxref=GenBank:WP_001185138.1;Name=WP_001185138.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AD11_RS25050;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001185138.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 99318 100397 . + . ID=gene-AD11_RS25055;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AD11_RS25055;old_locus_tag=AD11_4421 NZ_JJLL01000159.1 Protein Homology CDS 99318 100397 . + 0 ID=cds-WP_001004446.1;Parent=gene-AD11_RS25055;Dbxref=GenBank:WP_001004446.1;Name=WP_001004446.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AD11_RS25055;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004446.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 100412 100732 . + . ID=gene-AD11_RS25060;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AD11_RS25060;old_locus_tag=AD11_4422 NZ_JJLL01000159.1 Protein Homology CDS 100412 100732 . + 0 ID=cds-WP_000161265.1;Parent=gene-AD11_RS25060;Dbxref=GenBank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AD11_RS25060;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 100783 103080 . + . ID=gene-AD11_RS25065;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AD11_RS25065;old_locus_tag=AD11_4423 NZ_JJLL01000159.1 Protein Homology CDS 100783 103080 . + 0 ID=cds-WP_000184830.1;Parent=gene-AD11_RS25065;Dbxref=GenBank:WP_000184830.1;Name=WP_000184830.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418386.1;locus_tag=AD11_RS25065;product=formate C-acetyltransferase;protein_id=WP_000184830.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 103046 103924 . + . ID=gene-AD11_RS25070;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=AD11_RS25070;old_locus_tag=AD11_4424 NZ_JJLL01000159.1 Protein Homology CDS 103046 103924 . + 0 ID=cds-WP_000204139.1;Parent=gene-AD11_RS25070;Dbxref=GenBank:WP_000204139.1;Name=WP_000204139.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312908.3;locus_tag=AD11_RS25070;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000204139.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 103926 104267 . + . ID=gene-AD11_RS25075;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AD11_RS25075;old_locus_tag=AD11_4425 NZ_JJLL01000159.1 Protein Homology CDS 103926 104267 . + 0 ID=cds-WP_000323846.1;Parent=gene-AD11_RS25075;Dbxref=GenBank:WP_000323846.1;Name=WP_000323846.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418388.1;locus_tag=AD11_RS25075;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323846.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 104254 105105 . - . ID=gene-AD11_RS25080;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AD11_RS25080;old_locus_tag=AD11_4426 NZ_JJLL01000159.1 Protein Homology CDS 104254 105105 . - 0 ID=cds-WP_000274624.1;Parent=gene-AD11_RS25080;Dbxref=GenBank:WP_000274624.1;Name=WP_000274624.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709754.1;locus_tag=AD11_RS25080;product=AraC family transcriptional regulator;protein_id=WP_000274624.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 105320 107053 . - . ID=gene-AD11_RS25085;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AD11_RS25085;old_locus_tag=AD11_4427 NZ_JJLL01000159.1 Protein Homology CDS 105320 107053 . - 0 ID=cds-WP_000556295.1;Parent=gene-AD11_RS25085;Dbxref=GenBank:WP_000556295.1;Name=WP_000556295.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709755.2;locus_tag=AD11_RS25085;product=phosphoethanolamine transferase CptA;protein_id=WP_000556295.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 107235 109886 . - . ID=gene-AD11_RS25090;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AD11_RS25090;old_locus_tag=AD11_4428 NZ_JJLL01000159.1 Protein Homology CDS 107235 109886 . - 0 ID=cds-WP_001005579.1;Parent=gene-AD11_RS25090;Dbxref=GenBank:WP_001005579.1;Name=WP_001005579.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AD11_RS25090;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005579.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 110238 111389 . - . ID=gene-AD11_RS25095;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AD11_RS25095;old_locus_tag=AD11_4429 NZ_JJLL01000159.1 Protein Homology CDS 110238 111389 . - 0 ID=cds-WP_001301272.1;Parent=gene-AD11_RS25095;Dbxref=GenBank:WP_001301272.1;Name=WP_001301272.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AD11_RS25095;product=acetylornithine deacetylase;protein_id=WP_001301272.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 111543 112547 . + . ID=gene-AD11_RS25100;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AD11_RS25100;old_locus_tag=AD11_4430 NZ_JJLL01000159.1 Protein Homology CDS 111543 112547 . + 0 ID=cds-WP_000935370.1;Parent=gene-AD11_RS25100;Dbxref=GenBank:WP_000935370.1;Name=WP_000935370.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AD11_RS25100;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_000935370.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 112555 113331 . + . ID=gene-AD11_RS25105;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AD11_RS25105;old_locus_tag=AD11_4431 NZ_JJLL01000159.1 Protein Homology CDS 112555 113331 . + 0 ID=cds-WP_001302318.1;Parent=gene-AD11_RS25105;Dbxref=GenBank:WP_001302318.1;Name=WP_001302318.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AD11_RS25105;product=acetylglutamate kinase;protein_id=WP_001302318.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 113392 114765 . + . ID=gene-AD11_RS25110;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AD11_RS25110;old_locus_tag=AD11_4432 NZ_JJLL01000159.1 Protein Homology CDS 113392 114765 . + 0 ID=cds-WP_001230087.1;Parent=gene-AD11_RS25110;Dbxref=GenBank:WP_001230087.1;Name=WP_001230087.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=AD11_RS25110;product=argininosuccinate lyase;protein_id=WP_001230087.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 115032 115949 . + . ID=gene-AD11_RS25115;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AD11_RS25115;old_locus_tag=AD11_4433 NZ_JJLL01000159.1 Protein Homology CDS 115032 115949 . + 0 ID=cds-WP_001025939.1;Parent=gene-AD11_RS25115;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AD11_RS25115;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 115932 117332 . - . ID=gene-AD11_RS25120;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AD11_RS25120;old_locus_tag=AD11_4434 NZ_JJLL01000159.1 Protein Homology CDS 115932 117332 . - 0 ID=cds-WP_001120810.1;Parent=gene-AD11_RS25120;Dbxref=GenBank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AD11_RS25120;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 117663 118313 . + . ID=gene-AD11_RS25125;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AD11_RS25125;old_locus_tag=AD11_4436 NZ_JJLL01000159.1 Protein Homology CDS 117663 118313 . + 0 ID=cds-WP_139299918.1;Parent=gene-AD11_RS25125;Dbxref=GenBank:WP_139299918.1;Name=WP_139299918.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AD11_RS25125;product=HTH-type transcriptional repressor FabR;protein_id=WP_139299918.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 118313 118672 . + . ID=gene-AD11_RS25130;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AD11_RS25130;old_locus_tag=AD11_4437 NZ_JJLL01000159.1 Protein Homology CDS 118313 118672 . + 0 ID=cds-WP_000806411.1;Parent=gene-AD11_RS25130;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AD11_RS25130;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 118712 119812 . - . ID=gene-AD11_RS25135;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AD11_RS25135;old_locus_tag=AD11_4438 NZ_JJLL01000159.1 Protein Homology CDS 118712 119812 . - 0 ID=cds-WP_000187022.1;Parent=gene-AD11_RS25135;Dbxref=GenBank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AD11_RS25135;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11 NZ_JJLL01000159.1 cmsearch riboswitch 119926 120115 . + . ID=id-NZ_JJLL01000159.1:119926..120115;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLL01000159.1 RefSeq gene 120181 122064 . + . ID=gene-AD11_RS25140;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AD11_RS25140;old_locus_tag=AD11_4439 NZ_JJLL01000159.1 Protein Homology CDS 120181 122064 . + 0 ID=cds-WP_000591385.1;Parent=gene-AD11_RS25140;Dbxref=GenBank:WP_000591385.1;Name=WP_000591385.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224408.1;locus_tag=AD11_RS25140;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591385.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 122009 122866 . + . ID=gene-AD11_RS25145;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AD11_RS25145;old_locus_tag=AD11_4440 NZ_JJLL01000159.1 Protein Homology CDS 122009 122866 . + 0 ID=cds-WP_000201821.1;Parent=gene-AD11_RS25145;Dbxref=GenBank:WP_000201821.1;Name=WP_000201821.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312925.2;locus_tag=AD11_RS25145;product=glutamate racemase;protein_id=WP_000201821.1;transl_table=11 NZ_JJLL01000159.1 RefSeq gene 123240 124211 . + . ID=gene-AD11_RS25150;Name=AD11_RS25150;end_range=124211,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS25150;old_locus_tag=AD11_4441;partial=true NZ_JJLL01000159.1 cmsearch rRNA 123240 124211 . + . ID=rna-AD11_RS25150;Parent=gene-AD11_RS25150;Dbxref=RFAM:RF00177;end_range=124211,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25150;partial=true;product=16S ribosomal RNA NZ_JJLL01000159.1 cmsearch exon 123240 124211 . + . ID=exon-AD11_RS25150-1;Parent=rna-AD11_RS25150;Dbxref=RFAM:RF00177;end_range=124211,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25150;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLL01000160.1 1 2567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000160.1 RefSeq region 1 2567 . + . ID=NZ_JJLL01000160.1:1..2567;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000160.1 RefSeq gene 1 465 . + . ID=gene-AD11_RS25155;Name=AD11_RS25155;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS25155;partial=true;start_range=.,1 NZ_JJLL01000160.1 cmsearch rRNA 1 465 . + . ID=rna-AD11_RS25155;Parent=gene-AD11_RS25155;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25155;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000160.1 cmsearch exon 1 465 . + . ID=exon-AD11_RS25155-1;Parent=rna-AD11_RS25155;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25155;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLL01000160.1 RefSeq gene 560 675 . + . ID=gene-AD11_RS25160;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS25160;old_locus_tag=AD11_4442 NZ_JJLL01000160.1 cmsearch rRNA 560 675 . + . ID=rna-AD11_RS25160;Parent=gene-AD11_RS25160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25160;product=5S ribosomal RNA NZ_JJLL01000160.1 cmsearch exon 560 675 . + . ID=exon-AD11_RS25160-1;Parent=rna-AD11_RS25160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25160;product=5S ribosomal RNA NZ_JJLL01000160.1 RefSeq gene 1000 2298 . + . ID=gene-AD11_RS25170;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AD11_RS25170;old_locus_tag=AD11_4444 NZ_JJLL01000160.1 Protein Homology CDS 1000 2298 . + 0 ID=cds-WP_000841103.1-3;Parent=gene-AD11_RS25170;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AD11_RS25170;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JJLL01000160.1 RefSeq gene 2295 2567 . - . ID=gene-AD11_RS25175;Name=AD11_RS25175;end_range=2567,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25175;partial=true NZ_JJLL01000160.1 Protein Homology CDS 2295 2567 . - 0 ID=cds-WP_032083853.1;Parent=gene-AD11_RS25175;Dbxref=GenBank:WP_032083853.1;Name=WP_032083853.1;end_range=2567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AD11_RS25175;partial=true;product=YfiM family lipoprotein;protein_id=WP_032083853.1;transl_table=11 ##sequence-region NZ_JJLL01000161.1 1 2414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000161.1 RefSeq region 1 2414 . + . ID=NZ_JJLL01000161.1:1..2414;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000161.1 RefSeq gene 1 778 . + . ID=gene-AD11_RS25180;Name=AD11_RS25180;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS25180;partial=true;start_range=.,1 NZ_JJLL01000161.1 cmsearch rRNA 1 778 . + . ID=rna-AD11_RS25180;Parent=gene-AD11_RS25180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25180;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLL01000161.1 cmsearch exon 1 778 . + . ID=exon-AD11_RS25180-1;Parent=rna-AD11_RS25180;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25180;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLL01000161.1 RefSeq gene 864 939 . + . ID=gene-AD11_RS25185;Name=AD11_RS25185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS25185;old_locus_tag=AD11_4446 NZ_JJLL01000161.1 tRNAscan-SE tRNA 864 939 . + . ID=rna-AD11_RS25185;Parent=gene-AD11_RS25185;anticodon=(pos:898..900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25185;product=tRNA-Glu NZ_JJLL01000161.1 tRNAscan-SE exon 864 939 . + . ID=exon-AD11_RS25185-1;Parent=rna-AD11_RS25185;anticodon=(pos:898..900);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25185;product=tRNA-Glu NZ_JJLL01000161.1 RefSeq gene 1133 2414 . + . ID=gene-AD11_RS25190;Name=AD11_RS25190;end_range=2414,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AD11_RS25190;partial=true NZ_JJLL01000161.1 cmsearch rRNA 1133 2414 . + . ID=rna-AD11_RS25190;Parent=gene-AD11_RS25190;Dbxref=RFAM:RF02541;end_range=2414,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25190;partial=true;product=23S ribosomal RNA NZ_JJLL01000161.1 cmsearch exon 1133 2414 . + . ID=exon-AD11_RS25190-1;Parent=rna-AD11_RS25190;Dbxref=RFAM:RF02541;end_range=2414,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25190;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLL01000162.1 1 2051 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000162.1 RefSeq region 1 2051 . + . ID=NZ_JJLL01000162.1:1..2051;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000162.1 RefSeq gene 235 350 . + . ID=gene-AD11_RS25200;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AD11_RS25200;old_locus_tag=AD11_4447 NZ_JJLL01000162.1 cmsearch rRNA 235 350 . + . ID=rna-AD11_RS25200;Parent=gene-AD11_RS25200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25200;product=5S ribosomal RNA NZ_JJLL01000162.1 cmsearch exon 235 350 . + . ID=exon-AD11_RS25200-1;Parent=rna-AD11_RS25200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AD11_RS25200;product=5S ribosomal RNA NZ_JJLL01000162.1 RefSeq gene 465 908 . - . ID=gene-AD11_RS25205;Name=AD11_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25205;old_locus_tag=AD11_4448 NZ_JJLL01000162.1 Protein Homology CDS 465 908 . - 0 ID=cds-WP_000237005.1;Parent=gene-AD11_RS25205;Dbxref=GenBank:WP_000237005.1;Name=WP_000237005.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312957.1;locus_tag=AD11_RS25205;product=acetyltransferase;protein_id=WP_000237005.1;transl_table=11 NZ_JJLL01000162.1 RefSeq gene 1065 1994 . + . ID=gene-AD11_RS25210;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AD11_RS25210;old_locus_tag=AD11_4449 NZ_JJLL01000162.1 Protein Homology CDS 1065 1994 . + 0 ID=cds-WP_001122778.1;Parent=gene-AD11_RS25210;Dbxref=GenBank:WP_001122778.1;Name=WP_001122778.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AD11_RS25210;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122778.1;transl_table=11 ##sequence-region NZ_JJLL01000163.1 1 144260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000163.1 RefSeq region 1 144260 . + . ID=NZ_JJLL01000163.1:1..144260;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000163.1 RefSeq gene 1 778 . + . ID=gene-AD11_RS25215;Name=AD11_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25215;old_locus_tag=AD11_4450;partial=true;start_range=.,1 NZ_JJLL01000163.1 Protein Homology CDS 1 778 . + 1 ID=cds-WP_033866544.1;Parent=gene-AD11_RS25215;Dbxref=GenBank:WP_033866544.1;Name=WP_033866544.1;Ontology_term=GO:0019281,GO:0004414,GO:0008899;gbkey=CDS;go_function=homoserine O-acetyltransferase activity|0004414||IEA,homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AD11_RS25215;partial=true;product=homoserine O-succinyltransferase;protein_id=WP_033866544.1;start_range=.,1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 1047 2648 . + . ID=gene-AD11_RS25220;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AD11_RS25220;old_locus_tag=AD11_4451 NZ_JJLL01000163.1 Protein Homology CDS 1047 2648 . + 0 ID=cds-WP_000138917.1;Parent=gene-AD11_RS25220;Dbxref=GenBank:WP_000138917.1;Name=WP_000138917.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418438.1;locus_tag=AD11_RS25220;product=malate synthase A;protein_id=WP_000138917.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 2678 3982 . + . ID=gene-AD11_RS25225;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AD11_RS25225;old_locus_tag=AD11_4452 NZ_JJLL01000163.1 Protein Homology CDS 2678 3982 . + 0 ID=cds-WP_000857856.1;Parent=gene-AD11_RS25225;Dbxref=GenBank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AD11_RS25225;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 4459 6195 . + . ID=gene-AD11_RS25230;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AD11_RS25230;old_locus_tag=AD11_4453 NZ_JJLL01000163.1 Protein Homology CDS 4459 6195 . + 0 ID=cds-WP_001533924.1;Parent=gene-AD11_RS25230;Dbxref=GenBank:WP_001533924.1;Name=WP_001533924.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AD11_RS25230;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001533924.1;transl_table=11 NZ_JJLL01000163.1 RefSeq pseudogene 6164 7737 . - . ID=gene-AD11_RS25240;Name=AD11_RS25240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS25240;old_locus_tag=AD11_4455;pseudo=true NZ_JJLL01000163.1 Protein Homology CDS 6164 7737 . - 0 ID=cds-AD11_RS25240;Parent=gene-AD11_RS25240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AD11_RS25240;product=ShET2/EspL2 family type III secretion system effector toxin;pseudo=true;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 8054 8878 . - . ID=gene-AD11_RS25245;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AD11_RS25245;old_locus_tag=AD11_4456 NZ_JJLL01000163.1 Protein Homology CDS 8054 8878 . - 0 ID=cds-WP_001385054.1;Parent=gene-AD11_RS25245;Dbxref=GenBank:WP_001385054.1;Name=WP_001385054.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AD11_RS25245;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_001385054.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 9078 12761 . + . ID=gene-AD11_RS25250;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AD11_RS25250;old_locus_tag=AD11_4457 NZ_JJLL01000163.1 Protein Homology CDS 9078 12761 . + 0 ID=cds-WP_033865880.1;Parent=gene-AD11_RS25250;Dbxref=GenBank:WP_033865880.1;Name=WP_033865880.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418443.1;locus_tag=AD11_RS25250;product=methionine synthase;protein_id=WP_033865880.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 12981 14612 . + . ID=gene-AD11_RS25255;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=AD11_RS25255;old_locus_tag=AD11_4458 NZ_JJLL01000163.1 Protein Homology CDS 12981 14612 . + 0 ID=cds-WP_000956830.1;Parent=gene-AD11_RS25255;Dbxref=GenBank:WP_000956830.1;Name=WP_000956830.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;gene=yjbB;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AD11_RS25255;product=Na/Pi cotransporter family protein;protein_id=WP_000956830.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 14702 15391 . - . ID=gene-AD11_RS25260;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AD11_RS25260;old_locus_tag=AD11_4459 NZ_JJLL01000163.1 Protein Homology CDS 14702 15391 . - 0 ID=cds-WP_000421772.1;Parent=gene-AD11_RS25260;Dbxref=GenBank:WP_000421772.1;Name=WP_000421772.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709805.1;locus_tag=AD11_RS25260;product=dipeptidase PepE;protein_id=WP_000421772.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 15603 16475 . + . ID=gene-AD11_RS25265;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AD11_RS25265;old_locus_tag=AD11_4460 NZ_JJLL01000163.1 Protein Homology CDS 15603 16475 . + 0 ID=cds-WP_000936372.1;Parent=gene-AD11_RS25265;Dbxref=GenBank:WP_000936372.1;Name=WP_000936372.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313032.1;locus_tag=AD11_RS25265;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936372.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 16608 16880 . - . ID=gene-AD11_RS25270;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=AD11_RS25270;old_locus_tag=AD11_4461 NZ_JJLL01000163.1 Protein Homology CDS 16608 16880 . - 0 ID=cds-WP_001207634.1;Parent=gene-AD11_RS25270;Dbxref=GenBank:WP_001207634.1;Name=WP_001207634.1;gbkey=CDS;gene=yjbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418447.1;locus_tag=AD11_RS25270;product=DUF3811 domain-containing protein;protein_id=WP_001207634.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 17133 18482 . - . ID=gene-AD11_RS25275;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AD11_RS25275;old_locus_tag=AD11_4462 NZ_JJLL01000163.1 Protein Homology CDS 17133 18482 . - 0 ID=cds-WP_033865881.1;Parent=gene-AD11_RS25275;Dbxref=GenBank:WP_033865881.1;Name=WP_033865881.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313034.1;locus_tag=AD11_RS25275;product=lysine-sensitive aspartokinase 3;protein_id=WP_033865881.1;transl_table=11 NZ_JJLL01000163.1 cmsearch riboswitch 18574 18770 . - . ID=id-NZ_JJLL01000163.1:18574..18770;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLL01000163.1 RefSeq gene 19007 20656 . + . ID=gene-AD11_RS25280;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AD11_RS25280;old_locus_tag=AD11_4463 NZ_JJLL01000163.1 Protein Homology CDS 19007 20656 . + 0 ID=cds-WP_000789986.1;Parent=gene-AD11_RS25280;Dbxref=GenBank:WP_000789986.1;Name=WP_000789986.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=AD11_RS25280;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 21168 21410 . + . ID=gene-AD11_RS25285;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AD11_RS25285;old_locus_tag=AD11_4464 NZ_JJLL01000163.1 Protein Homology CDS 21168 21410 . + 0 ID=cds-WP_032187760.1;Parent=gene-AD11_RS25285;Dbxref=GenBank:WP_032187760.1;Name=WP_032187760.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AD11_RS25285;product=exopolysaccharide production protein YjbE;protein_id=WP_032187760.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 21524 22162 . + . ID=gene-AD11_RS25290;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=AD11_RS25290;old_locus_tag=AD11_4465 NZ_JJLL01000163.1 Protein Homology CDS 21524 22162 . + 0 ID=cds-WP_016236417.1;Parent=gene-AD11_RS25290;Dbxref=GenBank:WP_016236417.1;Name=WP_016236417.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AD11_RS25290;product=YjbF family lipoprotein;protein_id=WP_016236417.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 22159 22896 . + . ID=gene-AD11_RS25295;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=AD11_RS25295;old_locus_tag=AD11_4466 NZ_JJLL01000163.1 Protein Homology CDS 22159 22896 . + 0 ID=cds-WP_000595558.1;Parent=gene-AD11_RS25295;Dbxref=GenBank:WP_000595558.1;Name=WP_000595558.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AD11_RS25295;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595558.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 22896 24992 . + . ID=gene-AD11_RS25300;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=AD11_RS25300;old_locus_tag=AD11_4467 NZ_JJLL01000163.1 Protein Homology CDS 22896 24992 . + 0 ID=cds-WP_000745776.1;Parent=gene-AD11_RS25300;Dbxref=GenBank:WP_000745776.1;Name=WP_000745776.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AD11_RS25300;product=YjbH domain-containing protein;protein_id=WP_000745776.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 25039 25317 . - . ID=gene-AD11_RS31055;Name=AD11_RS31055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31055 NZ_JJLL01000163.1 Protein Homology CDS 25039 25317 . - 0 ID=cds-WP_001295279.1;Parent=gene-AD11_RS31055;Dbxref=GenBank:WP_001295279.1;Name=WP_001295279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AD11_RS31055;product=periplasmic protein;protein_id=WP_001295279.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 25318 25461 . + . ID=gene-AD11_RS32250;Name=AD11_RS32250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32250;old_locus_tag=AD11_4469 NZ_JJLL01000163.1 GeneMarkS-2+ CDS 25318 25461 . + 0 ID=cds-WP_000487766.1;Parent=gene-AD11_RS32250;Dbxref=GenBank:WP_000487766.1;Name=WP_000487766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AD11_RS32250;product=hypothetical protein;protein_id=WP_000487766.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 25587 25997 . + . ID=gene-AD11_RS25320;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AD11_RS25320;old_locus_tag=AD11_4470 NZ_JJLL01000163.1 Protein Homology CDS 25587 25997 . + 0 ID=cds-WP_000202902.1;Parent=gene-AD11_RS25320;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AD11_RS25320;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 26041 27516 . - . ID=gene-AD11_RS25325;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=AD11_RS25325;old_locus_tag=AD11_4471 NZ_JJLL01000163.1 Protein Homology CDS 26041 27516 . - 0 ID=cds-WP_033866545.1;Parent=gene-AD11_RS25325;Dbxref=GenBank:WP_033866545.1;Name=WP_033866545.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AD11_RS25325;product=D-xylose transporter XylE;protein_id=WP_033866545.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 27888 28778 . - . ID=gene-AD11_RS25330;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AD11_RS25330;old_locus_tag=AD11_4472 NZ_JJLL01000163.1 Protein Homology CDS 27888 28778 . - 0 ID=cds-WP_001252058.1;Parent=gene-AD11_RS25330;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AD11_RS25330;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 28793 30337 . - . ID=gene-AD11_RS25335;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AD11_RS25335;old_locus_tag=AD11_4473 NZ_JJLL01000163.1 Protein Homology CDS 28793 30337 . - 0 ID=cds-WP_001297290.1;Parent=gene-AD11_RS25335;Dbxref=GenBank:WP_001297290.1;Name=WP_001297290.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AD11_RS25335;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 30491 31681 . - . ID=gene-AD11_RS25340;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AD11_RS25340;old_locus_tag=AD11_4474 NZ_JJLL01000163.1 Protein Homology CDS 30491 31681 . - 0 ID=cds-WP_000695387.1;Parent=gene-AD11_RS25340;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AD11_RS25340;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 32046 33161 . + . ID=gene-AD11_RS25350;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AD11_RS25350;old_locus_tag=AD11_4475 NZ_JJLL01000163.1 Protein Homology CDS 32046 33161 . + 0 ID=cds-WP_000179165.1;Parent=gene-AD11_RS25350;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AD11_RS25350;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 33233 34573 . + . ID=gene-AD11_RS25355;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AD11_RS25355;old_locus_tag=AD11_4476 NZ_JJLL01000163.1 Protein Homology CDS 33233 34573 . + 0 ID=cds-WP_000973658.1;Parent=gene-AD11_RS25355;Dbxref=GenBank:WP_000973658.1;Name=WP_000973658.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313046.1;locus_tag=AD11_RS25355;product=maltoporin LamB;protein_id=WP_000973658.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 34816 35736 . + . ID=gene-AD11_RS25360;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AD11_RS25360;old_locus_tag=AD11_4477 NZ_JJLL01000163.1 Protein Homology CDS 34816 35736 . + 0 ID=cds-WP_000783444.1;Parent=gene-AD11_RS25360;Dbxref=GenBank:WP_000783444.1;Name=WP_000783444.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=AD11_RS25360;product=maltose operon protein MalM;protein_id=WP_000783444.1;transl_table=11 NZ_JJLL01000163.1 RefSeq pseudogene 35965 37545 . + . ID=gene-AD11_RS25370;Name=AD11_RS25370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS25370;old_locus_tag=AD11_4480;pseudo=true NZ_JJLL01000163.1 Protein Homology CDS 35965 37545 . + 0 ID=cds-AD11_RS25370;Parent=gene-AD11_RS25370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579104.1;locus_tag=AD11_RS25370;product=SopA family protein;pseudo=true;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 37768 38265 . + . ID=gene-AD11_RS25375;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AD11_RS25375;old_locus_tag=AD11_4481 NZ_JJLL01000163.1 Protein Homology CDS 37768 38265 . + 0 ID=cds-WP_001295693.1;Parent=gene-AD11_RS25375;Dbxref=GenBank:WP_001295693.1;Name=WP_001295693.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=AD11_RS25375;product=chorismate lyase;protein_id=WP_001295693.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 38278 39150 . + . ID=gene-AD11_RS25380;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AD11_RS25380;old_locus_tag=AD11_4482 NZ_JJLL01000163.1 Protein Homology CDS 38278 39150 . + 0 ID=cds-WP_000455227.1;Parent=gene-AD11_RS25380;Dbxref=GenBank:WP_000455227.1;Name=WP_000455227.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AD11_RS25380;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455227.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 39305 41728 . - . ID=gene-AD11_RS25385;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AD11_RS25385;old_locus_tag=AD11_4483 NZ_JJLL01000163.1 Protein Homology CDS 39305 41728 . - 0 ID=cds-WP_001385068.1;Parent=gene-AD11_RS25385;Dbxref=GenBank:WP_001385068.1;Name=WP_001385068.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AD11_RS25385;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_001385068.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 41899 42267 . + . ID=gene-AD11_RS25390;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AD11_RS25390;old_locus_tag=AD11_4484 NZ_JJLL01000163.1 Protein Homology CDS 41899 42267 . + 0 ID=cds-WP_000002907.1;Parent=gene-AD11_RS25390;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AD11_RS25390;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 42377 42985 . + . ID=gene-AD11_RS25395;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AD11_RS25395;old_locus_tag=AD11_4485 NZ_JJLL01000163.1 Protein Homology CDS 42377 42985 . + 0 ID=cds-WP_000646078.1;Parent=gene-AD11_RS25395;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AD11_RS25395;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 43058 44383 . + . ID=gene-AD11_RS25400;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AD11_RS25400;old_locus_tag=AD11_4486 NZ_JJLL01000163.1 Protein Homology CDS 43058 44383 . + 0 ID=cds-WP_001295692.1;Parent=gene-AD11_RS25400;Dbxref=GenBank:WP_001295692.1;Name=WP_001295692.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AD11_RS25400;product=MATE family efflux transporter DinF;protein_id=WP_001295692.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 44499 44708 . + . ID=gene-AD11_RS25405;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AD11_RS25405;old_locus_tag=AD11_4487 NZ_JJLL01000163.1 Protein Homology CDS 44499 44708 . + 0 ID=cds-WP_001030593.1;Parent=gene-AD11_RS25405;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AD11_RS25405;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 44750 45265 . - . ID=gene-AD11_RS25410;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AD11_RS25410;old_locus_tag=AD11_4488 NZ_JJLL01000163.1 Protein Homology CDS 44750 45265 . - 0 ID=cds-WP_001295691.1;Parent=gene-AD11_RS25410;Dbxref=GenBank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AD11_RS25410;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11 NZ_JJLL01000163.1 RefSeq pseudogene 45583 46568 . + . ID=gene-AD11_RS25420;Name=AD11_RS25420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS25420;old_locus_tag=AD11_4490;pseudo=true NZ_JJLL01000163.1 Protein Homology CDS 45583 46568 . + 0 ID=cds-AD11_RS25420;Parent=gene-AD11_RS25420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AD11_RS25420;product=DUF2713 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 46931 47968 . + . ID=gene-AD11_RS25425;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AD11_RS25425;old_locus_tag=AD11_4492 NZ_JJLL01000163.1 Protein Homology CDS 46931 47968 . + 0 ID=cds-WP_001329186.1;Parent=gene-AD11_RS25425;Dbxref=GenBank:WP_001329186.1;Name=WP_001329186.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AD11_RS25425;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001329186.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 48102 48344 . + . ID=gene-AD11_RS25430;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AD11_RS25430;old_locus_tag=AD11_4493 NZ_JJLL01000163.1 Protein Homology CDS 48102 48344 . + 0 ID=cds-WP_000891404.1;Parent=gene-AD11_RS25430;Dbxref=GenBank:WP_000891404.1;Name=WP_000891404.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AD11_RS25430;product=envelope stress response protein PspG;protein_id=WP_000891404.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 48510 49493 . - . ID=gene-AD11_RS25435;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AD11_RS25435;old_locus_tag=AD11_4494 NZ_JJLL01000163.1 Protein Homology CDS 48510 49493 . - 0 ID=cds-WP_000235509.1;Parent=gene-AD11_RS25435;Dbxref=GenBank:WP_000235509.1;Name=WP_000235509.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=AD11_RS25435;product=quinone oxidoreductase;protein_id=WP_000235509.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 49576 50991 . + . ID=gene-AD11_RS25440;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AD11_RS25440;old_locus_tag=AD11_4495 NZ_JJLL01000163.1 Protein Homology CDS 49576 50991 . + 0 ID=cds-WP_033865884.1;Parent=gene-AD11_RS25440;Dbxref=GenBank:WP_033865884.1;Name=WP_033865884.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AD11_RS25440;product=replicative DNA helicase;protein_id=WP_033865884.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 51044 52123 . + . ID=gene-AD11_RS25445;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AD11_RS25445;old_locus_tag=AD11_4496 NZ_JJLL01000163.1 Protein Homology CDS 51044 52123 . + 0 ID=cds-WP_001147328.1;Parent=gene-AD11_RS25445;Dbxref=GenBank:WP_001147328.1;Name=WP_001147328.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AD11_RS25445;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 52376 53569 . + . ID=gene-AD11_RS25450;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AD11_RS25450;old_locus_tag=AD11_4498 NZ_JJLL01000163.1 Protein Homology CDS 52376 53569 . + 0 ID=cds-WP_000486988.1;Parent=gene-AD11_RS25450;Dbxref=GenBank:WP_000486988.1;Name=WP_000486988.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AD11_RS25450;product=aromatic amino acid transaminase;protein_id=WP_000486988.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 54071 54274 . - . ID=gene-AD11_RS31070;Name=yjbS;gbkey=Gene;gene=yjbS;gene_biotype=protein_coding;locus_tag=AD11_RS31070;old_locus_tag=AD11_4499 NZ_JJLL01000163.1 Protein Homology CDS 54071 54274 . - 0 ID=cds-WP_001321562.1;Parent=gene-AD11_RS31070;Dbxref=GenBank:WP_001321562.1;Name=WP_001321562.1;gbkey=CDS;gene=yjbS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AD11_RS31070;product=protein YjbS;protein_id=WP_001321562.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 54676 55389 . + . ID=gene-AD11_RS25460;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=AD11_RS25460;old_locus_tag=AD11_4501 NZ_JJLL01000163.1 Protein Homology CDS 54676 55389 . + 0 ID=cds-WP_033866546.1;Parent=gene-AD11_RS25460;Dbxref=GenBank:WP_033866546.1;Name=WP_033866546.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AD11_RS25460;product=acid phosphatase AphA;protein_id=WP_033866546.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 55500 55916 . + . ID=gene-AD11_RS25465;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AD11_RS25465;old_locus_tag=AD11_4502 NZ_JJLL01000163.1 Protein Homology CDS 55500 55916 . + 0 ID=cds-WP_000270375.1;Parent=gene-AD11_RS25465;Dbxref=GenBank:WP_000270375.1;Name=WP_000270375.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AD11_RS25465;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270375.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 55920 56276 . + . ID=gene-AD11_RS25470;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AD11_RS25470;old_locus_tag=AD11_4503 NZ_JJLL01000163.1 Protein Homology CDS 55920 56276 . + 0 ID=cds-WP_000155657.1;Parent=gene-AD11_RS25470;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AD11_RS25470;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 56311 59133 . - . ID=gene-AD11_RS25475;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AD11_RS25475;old_locus_tag=AD11_4504 NZ_JJLL01000163.1 Protein Homology CDS 56311 59133 . - 0 ID=cds-WP_000357740.1;Parent=gene-AD11_RS25475;Dbxref=GenBank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AD11_RS25475;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 59387 59923 . + . ID=gene-AD11_RS25480;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AD11_RS25480;old_locus_tag=AD11_4505 NZ_JJLL01000163.1 Protein Homology CDS 59387 59923 . + 0 ID=cds-WP_000168305.1;Parent=gene-AD11_RS25480;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AD11_RS25480;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 60022 60303 . - . ID=gene-AD11_RS25485;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AD11_RS25485;old_locus_tag=AD11_4506 NZ_JJLL01000163.1 Protein Homology CDS 60022 60303 . - 0 ID=cds-WP_001295689.1;Parent=gene-AD11_RS25485;Dbxref=GenBank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AD11_RS25485;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 60733 62319 . + . ID=gene-AD11_RS25490;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AD11_RS25490;old_locus_tag=AD11_4507 NZ_JJLL01000163.1 Protein Homology CDS 60733 62319 . + 0 ID=cds-WP_000019548.1;Parent=gene-AD11_RS25490;Dbxref=GenBank:WP_000019548.1;Name=WP_000019548.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AD11_RS25490;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_000019548.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 62322 62645 . - . ID=gene-AD11_RS25495;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AD11_RS25495;old_locus_tag=AD11_4508 NZ_JJLL01000163.1 Protein Homology CDS 62322 62645 . - 0 ID=cds-WP_000019358.1;Parent=gene-AD11_RS25495;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AD11_RS25495;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 62731 63195 . + . ID=gene-AD11_RS25500;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AD11_RS25500;old_locus_tag=AD11_4509 NZ_JJLL01000163.1 Protein Homology CDS 62731 63195 . + 0 ID=cds-WP_000412428.1;Parent=gene-AD11_RS25500;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AD11_RS25500;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 63741 65090 . + . ID=gene-AD11_RS25505;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AD11_RS25505;old_locus_tag=AD11_4511 NZ_JJLL01000163.1 Protein Homology CDS 63741 65090 . + 0 ID=cds-WP_000106882.1;Parent=gene-AD11_RS25505;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AD11_RS25505;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 65242 66891 . + . ID=gene-AD11_RS25510;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AD11_RS25510;old_locus_tag=AD11_4513 NZ_JJLL01000163.1 Protein Homology CDS 65242 66891 . + 0 ID=cds-WP_000402207.1;Parent=gene-AD11_RS25510;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AD11_RS25510;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 67045 68337 . - . ID=gene-AD11_RS25515;Name=espX5;gbkey=Gene;gene=espX5;gene_biotype=protein_coding;locus_tag=AD11_RS25515;old_locus_tag=AD11_4514 NZ_JJLL01000163.1 Protein Homology CDS 67045 68337 . - 0 ID=cds-WP_033865886.1;Parent=gene-AD11_RS25515;Dbxref=GenBank:WP_033865886.1;Name=WP_033865886.1;gbkey=CDS;gene=espX5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418490.1;locus_tag=AD11_RS25515;product=T3SS effector pentapeptide repeat protein EspX5;protein_id=WP_033865886.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 68515 70164 . - . ID=gene-AD11_RS25520;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AD11_RS25520;old_locus_tag=AD11_4515 NZ_JJLL01000163.1 Protein Homology CDS 68515 70164 . - 0 ID=cds-WP_000832573.1;Parent=gene-AD11_RS25520;Dbxref=GenBank:WP_000832573.1;Name=WP_000832573.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=AD11_RS25520;product=cation/acetate symporter ActP;protein_id=WP_000832573.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 70161 70475 . - . ID=gene-AD11_RS25525;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AD11_RS25525;old_locus_tag=AD11_4516 NZ_JJLL01000163.1 Protein Homology CDS 70161 70475 . - 0 ID=cds-WP_001014565.1;Parent=gene-AD11_RS25525;Dbxref=GenBank:WP_001014565.1;Name=WP_001014565.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AD11_RS25525;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 70675 72633 . - . ID=gene-AD11_RS25530;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AD11_RS25530;old_locus_tag=AD11_4517 NZ_JJLL01000163.1 Protein Homology CDS 70675 72633 . - 0 ID=cds-WP_033865889.1;Parent=gene-AD11_RS25530;Dbxref=GenBank:WP_033865889.1;Name=WP_033865889.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AD11_RS25530;product=acetate--CoA ligase;protein_id=WP_033865889.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 73026 74462 . + . ID=gene-AD11_RS25535;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AD11_RS25535;old_locus_tag=AD11_4518 NZ_JJLL01000163.1 Protein Homology CDS 73026 74462 . + 0 ID=cds-WP_001324835.1;Parent=gene-AD11_RS25535;Dbxref=GenBank:WP_001324835.1;Name=WP_001324835.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AD11_RS25535;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_001324835.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 74507 75073 . + . ID=gene-AD11_RS25540;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AD11_RS25540;old_locus_tag=AD11_4519 NZ_JJLL01000163.1 Protein Homology CDS 74507 75073 . + 0 ID=cds-WP_001295391.1;Parent=gene-AD11_RS25540;Dbxref=GenBank:WP_001295391.1;Name=WP_001295391.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AD11_RS25540;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001295391.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 75070 75741 . + . ID=gene-AD11_RS25545;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AD11_RS25545;old_locus_tag=AD11_4520 NZ_JJLL01000163.1 Protein Homology CDS 75070 75741 . + 0 ID=cds-WP_000220296.1;Parent=gene-AD11_RS25545;Dbxref=GenBank:WP_000220296.1;Name=WP_000220296.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AD11_RS25545;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220296.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 75738 76694 . + . ID=gene-AD11_RS25550;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AD11_RS25550;old_locus_tag=AD11_4521 NZ_JJLL01000163.1 Protein Homology CDS 75738 76694 . + 0 ID=cds-WP_000195154.1;Parent=gene-AD11_RS25550;Dbxref=GenBank:WP_000195154.1;Name=WP_000195154.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AD11_RS25550;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_000195154.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 76714 78432 . + . ID=gene-AD11_RS25555;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AD11_RS25555;old_locus_tag=AD11_4522 NZ_JJLL01000163.1 Protein Homology CDS 76714 78432 . + 0 ID=cds-WP_071602393.1;Parent=gene-AD11_RS25555;Dbxref=GenBank:WP_071602393.1;Name=WP_071602393.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AD11_RS25555;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071602393.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 78425 78808 . + . ID=gene-AD11_RS25560;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AD11_RS25560;old_locus_tag=AD11_4523 NZ_JJLL01000163.1 Protein Homology CDS 78425 78808 . + 0 ID=cds-WP_001032544.1;Parent=gene-AD11_RS25560;Dbxref=GenBank:WP_001032544.1;Name=WP_001032544.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=AD11_RS25560;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032544.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 78805 79401 . + . ID=gene-AD11_RS25565;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AD11_RS25565;old_locus_tag=AD11_4524 NZ_JJLL01000163.1 Protein Homology CDS 78805 79401 . + 0 ID=cds-WP_000812893.1;Parent=gene-AD11_RS25565;Dbxref=GenBank:WP_000812893.1;Name=WP_000812893.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709852.1;locus_tag=AD11_RS25565;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812893.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 79743 81056 . + . ID=gene-AD11_RS25570;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AD11_RS25570;old_locus_tag=AD11_4525 NZ_JJLL01000163.1 Protein Homology CDS 79743 81056 . + 0 ID=cds-WP_000789589.1;Parent=gene-AD11_RS25570;Dbxref=GenBank:WP_000789589.1;Name=WP_000789589.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AD11_RS25570;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000789589.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 81360 82049 . - . ID=gene-AD11_RS25575;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AD11_RS25575;old_locus_tag=AD11_4526 NZ_JJLL01000163.1 Protein Homology CDS 81360 82049 . - 0 ID=cds-WP_000719886.1;Parent=gene-AD11_RS25575;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AD11_RS25575;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 82143 84290 . - . ID=gene-AD11_RS25580;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AD11_RS25580;old_locus_tag=AD11_4527 NZ_JJLL01000163.1 Protein Homology CDS 82143 84290 . - 0 ID=cds-WP_077747115.1;Parent=gene-AD11_RS25580;Dbxref=GenBank:WP_077747115.1;Name=WP_077747115.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AD11_RS25580;product=formate dehydrogenase subunit alpha;protein_id=WP_077747115.1;transl_except=(pos:complement(83871..83873)%2Caa:Sec);transl_table=11 NZ_JJLL01000163.1 RefSeq gene 84488 85954 . - . ID=gene-AD11_RS25590;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AD11_RS25590;old_locus_tag=AD11_4530 NZ_JJLL01000163.1 Protein Homology CDS 84488 85954 . - 0 ID=cds-WP_033865893.1;Parent=gene-AD11_RS25590;Dbxref=GenBank:WP_033865893.1;Name=WP_033865893.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709855.1;locus_tag=AD11_RS25590;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_033865893.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 85951 88002 . - . ID=gene-AD11_RS25595;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AD11_RS25595;old_locus_tag=AD11_4531 NZ_JJLL01000163.1 Protein Homology CDS 85951 88002 . - 0 ID=cds-WP_016236422.1;Parent=gene-AD11_RS25595;Dbxref=GenBank:WP_016236422.1;Name=WP_016236422.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AD11_RS25595;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_016236422.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 88002 89033 . - . ID=gene-AD11_RS25600;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AD11_RS25600;old_locus_tag=AD11_4532 NZ_JJLL01000163.1 Protein Homology CDS 88002 89033 . - 0 ID=cds-WP_000446378.1;Parent=gene-AD11_RS25600;Dbxref=GenBank:WP_000446378.1;Name=WP_000446378.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AD11_RS25600;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446378.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 89052 89327 . - . ID=gene-AD11_RS25605;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=AD11_RS25605;old_locus_tag=AD11_4533 NZ_JJLL01000163.1 Protein Homology CDS 89052 89327 . - 0 ID=cds-WP_001355613.1;Parent=gene-AD11_RS25605;Dbxref=GenBank:WP_001355613.1;Name=WP_001355613.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=AD11_RS25605;product=YtcA family lipoprotein;protein_id=WP_001355613.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 89536 91521 . - . ID=gene-AD11_RS25610;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AD11_RS25610;old_locus_tag=AD11_4534 NZ_JJLL01000163.1 Protein Homology CDS 89536 91521 . - 0 ID=cds-WP_001066007.1;Parent=gene-AD11_RS25610;Dbxref=GenBank:WP_001066007.1;Name=WP_001066007.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AD11_RS25610;product=alkyl sulfatase YjcS;protein_id=WP_001066007.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 91774 92091 . + . ID=gene-AD11_RS25615;Name=AD11_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25615;old_locus_tag=AD11_4535 NZ_JJLL01000163.1 Protein Homology CDS 91774 92091 . + 0 ID=cds-WP_001183287.1;Parent=gene-AD11_RS25615;Dbxref=GenBank:WP_001183287.1;Name=WP_001183287.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001183281.1;locus_tag=AD11_RS25615;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_001183287.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 92160 92489 . + . ID=gene-AD11_RS25620;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AD11_RS25620;old_locus_tag=AD11_4536 NZ_JJLL01000163.1 Protein Homology CDS 92160 92489 . + 0 ID=cds-WP_000819746.1;Parent=gene-AD11_RS25620;Dbxref=GenBank:WP_000819746.1;Name=WP_000819746.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AD11_RS25620;product=DDRRRQL repeat protein YjdP;protein_id=WP_000819746.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 92636 93394 . - . ID=gene-AD11_RS25625;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AD11_RS25625;old_locus_tag=AD11_4537 NZ_JJLL01000163.1 Protein Homology CDS 92636 93394 . - 0 ID=cds-WP_000059934.1;Parent=gene-AD11_RS25625;Dbxref=GenBank:WP_000059934.1;Name=WP_000059934.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313102.1;locus_tag=AD11_RS25625;product=phosphonate metabolism protein PhnP;protein_id=WP_000059934.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 93396 93830 . - . ID=gene-AD11_RS25630;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AD11_RS25630;old_locus_tag=AD11_4538 NZ_JJLL01000163.1 Protein Homology CDS 93396 93830 . - 0 ID=cds-WP_001110483.1;Parent=gene-AD11_RS25630;Dbxref=GenBank:WP_001110483.1;Name=WP_001110483.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AD11_RS25630;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110483.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 93817 94374 . - . ID=gene-AD11_RS25635;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AD11_RS25635;old_locus_tag=AD11_4539 NZ_JJLL01000163.1 Protein Homology CDS 93817 94374 . - 0 ID=cds-WP_000971887.1;Parent=gene-AD11_RS25635;Dbxref=GenBank:WP_000971887.1;Name=WP_000971887.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AD11_RS25635;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000971887.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 94374 95510 . - . ID=gene-AD11_RS25640;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AD11_RS25640;old_locus_tag=AD11_4540 NZ_JJLL01000163.1 Protein Homology CDS 94374 95510 . - 0 ID=cds-WP_000586322.1;Parent=gene-AD11_RS25640;Dbxref=GenBank:WP_000586322.1;Name=WP_000586322.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418519.1;locus_tag=AD11_RS25640;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586322.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 95507 96187 . - . ID=gene-AD11_RS25645;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AD11_RS25645;old_locus_tag=AD11_4541 NZ_JJLL01000163.1 Protein Homology CDS 95507 96187 . - 0 ID=cds-WP_000611403.1;Parent=gene-AD11_RS25645;Dbxref=GenBank:WP_000611403.1;Name=WP_000611403.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313106.1;locus_tag=AD11_RS25645;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611403.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 96298 97056 . - . ID=gene-AD11_RS25650;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AD11_RS25650;old_locus_tag=AD11_4542 NZ_JJLL01000163.1 Protein Homology CDS 96298 97056 . - 0 ID=cds-WP_001075518.1;Parent=gene-AD11_RS25650;Dbxref=GenBank:WP_001075518.1;Name=WP_001075518.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313107.1;locus_tag=AD11_RS25650;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001075518.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 97053 97898 . - . ID=gene-AD11_RS25655;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AD11_RS25655;old_locus_tag=AD11_4543 NZ_JJLL01000163.1 Protein Homology CDS 97053 97898 . - 0 ID=cds-WP_000002284.1;Parent=gene-AD11_RS25655;Dbxref=GenBank:WP_000002284.1;Name=WP_000002284.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313108.1;locus_tag=AD11_RS25655;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002284.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 97891 98955 . - . ID=gene-AD11_RS25660;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AD11_RS25660;old_locus_tag=AD11_4544 NZ_JJLL01000163.1 Protein Homology CDS 97891 98955 . - 0 ID=cds-WP_001325501.1;Parent=gene-AD11_RS25660;Dbxref=GenBank:WP_001325501.1;Name=WP_001325501.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418523.1;locus_tag=AD11_RS25660;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001325501.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 98955 99539 . - . ID=gene-AD11_RS25665;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AD11_RS25665;old_locus_tag=AD11_4545 NZ_JJLL01000163.1 Protein Homology CDS 98955 99539 . - 0 ID=cds-WP_000171628.1;Parent=gene-AD11_RS25665;Dbxref=GenBank:WP_000171628.1;Name=WP_000171628.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418524.1;locus_tag=AD11_RS25665;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171628.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 99536 99988 . - . ID=gene-AD11_RS25670;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AD11_RS25670;old_locus_tag=AD11_4546 NZ_JJLL01000163.1 Protein Homology CDS 99536 99988 . - 0 ID=cds-WP_000542783.1;Parent=gene-AD11_RS25670;Dbxref=GenBank:WP_000542783.1;Name=WP_000542783.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AD11_RS25670;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542783.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 99989 100714 . - . ID=gene-AD11_RS25675;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AD11_RS25675;old_locus_tag=AD11_4547 NZ_JJLL01000163.1 Protein Homology CDS 99989 100714 . - 0 ID=cds-WP_014641236.1;Parent=gene-AD11_RS25675;Dbxref=GenBank:WP_014641236.1;Name=WP_014641236.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AD11_RS25675;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_014641236.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 100735 101514 . - . ID=gene-AD11_RS25680;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AD11_RS25680;old_locus_tag=AD11_4548 NZ_JJLL01000163.1 Protein Homology CDS 100735 101514 . - 0 ID=cds-WP_001193500.1;Parent=gene-AD11_RS25680;Dbxref=GenBank:WP_001193500.1;Name=WP_001193500.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AD11_RS25680;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_001193500.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 101620 102636 . - . ID=gene-AD11_RS25685;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AD11_RS25685;old_locus_tag=AD11_4549 NZ_JJLL01000163.1 Protein Homology CDS 101620 102636 . - 0 ID=cds-WP_000992002.1;Parent=gene-AD11_RS25685;Dbxref=GenBank:WP_000992002.1;Name=WP_000992002.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AD11_RS25685;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000992002.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 102661 103449 . - . ID=gene-AD11_RS25690;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AD11_RS25690;old_locus_tag=AD11_4550 NZ_JJLL01000163.1 Protein Homology CDS 102661 103449 . - 0 ID=cds-WP_001193397.1;Parent=gene-AD11_RS25690;Dbxref=GenBank:WP_001193397.1;Name=WP_001193397.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709835.2;locus_tag=AD11_RS25690;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193397.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 103582 104025 . - . ID=gene-AD11_RS25695;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AD11_RS25695;old_locus_tag=AD11_4551 NZ_JJLL01000163.1 Protein Homology CDS 103582 104025 . - 0 ID=cds-WP_001131339.1;Parent=gene-AD11_RS25695;Dbxref=GenBank:WP_001131339.1;Name=WP_001131339.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AD11_RS25695;product=VOC family metalloprotein YjdN;protein_id=WP_001131339.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 104283 104618 . - . ID=gene-AD11_RS25700;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AD11_RS25700;old_locus_tag=AD11_4552 NZ_JJLL01000163.1 Protein Homology CDS 104283 104618 . - 0 ID=cds-WP_001300891.1;Parent=gene-AD11_RS25700;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AD11_RS25700;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 105020 107248 . + . ID=gene-AD11_RS25705;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AD11_RS25705;old_locus_tag=AD11_4553 NZ_JJLL01000163.1 Protein Homology CDS 105020 107248 . + 0 ID=cds-WP_000288557.1;Parent=gene-AD11_RS25705;Dbxref=GenBank:WP_000288557.1;Name=WP_000288557.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AD11_RS25705;product=clamp-binding protein CrfC;protein_id=WP_000288557.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 107245 108123 . + . ID=gene-AD11_RS25710;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AD11_RS25710;old_locus_tag=AD11_4554 NZ_JJLL01000163.1 Protein Homology CDS 107245 108123 . + 0 ID=cds-WP_000169188.1;Parent=gene-AD11_RS25710;Dbxref=GenBank:WP_000169188.1;Name=WP_000169188.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=AD11_RS25710;product=YjcZ-like family protein;protein_id=WP_000169188.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 108387 109889 . + . ID=gene-AD11_RS25715;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AD11_RS25715;old_locus_tag=AD11_4555 NZ_JJLL01000163.1 Protein Homology CDS 108387 109889 . + 0 ID=cds-WP_001298520.1;Parent=gene-AD11_RS25715;Dbxref=GenBank:WP_001298520.1;Name=WP_001298520.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313120.1;locus_tag=AD11_RS25715;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001298520.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 110001 110090 . + . ID=gene-AD11_RS25720;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AD11_RS25720 NZ_JJLL01000163.1 Protein Homology CDS 110001 110090 . + 0 ID=cds-WP_000797657.1;Parent=gene-AD11_RS25720;Dbxref=GenBank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AD11_RS25720;product=LpxT activity modulator PmrR;protein_id=WP_000797657.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 110066 111166 . - . ID=gene-AD11_RS25725;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AD11_RS25725;old_locus_tag=AD11_4556 NZ_JJLL01000163.1 Protein Homology CDS 110066 111166 . - 0 ID=cds-WP_187439463.1;Parent=gene-AD11_RS25725;Dbxref=GenBank:WP_187439463.1;Name=WP_187439463.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AD11_RS25725;product=two-component system sensor histidine kinase PmrB;protein_id=WP_187439463.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 111167 111835 . - . ID=gene-AD11_RS25730;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AD11_RS25730;old_locus_tag=AD11_4557 NZ_JJLL01000163.1 Protein Homology CDS 111167 111835 . - 0 ID=cds-WP_000697915.1;Parent=gene-AD11_RS25730;Dbxref=GenBank:WP_000697915.1;Name=WP_000697915.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AD11_RS25730;product=two-component system response regulator BasR;protein_id=WP_000697915.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 111832 113475 . - . ID=gene-AD11_RS25735;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AD11_RS25735;old_locus_tag=AD11_4558 NZ_JJLL01000163.1 Protein Homology CDS 111832 113475 . - 0 ID=cds-WP_001298860.1;Parent=gene-AD11_RS25735;Dbxref=GenBank:WP_001298860.1;Name=WP_001298860.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AD11_RS25735;product=phosphoethanolamine transferase EptA;protein_id=WP_001298860.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 113579 114916 . - . ID=gene-AD11_RS25740;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AD11_RS25740;old_locus_tag=AD11_4559 NZ_JJLL01000163.1 Protein Homology CDS 113579 114916 . - 0 ID=cds-WP_000093154.1;Parent=gene-AD11_RS25740;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AD11_RS25740;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 115053 115814 . - . ID=gene-AD11_RS25745;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AD11_RS25745;old_locus_tag=AD11_4560 NZ_JJLL01000163.1 Protein Homology CDS 115053 115814 . - 0 ID=cds-WP_001217059.1;Parent=gene-AD11_RS25745;Dbxref=GenBank:WP_001217059.1;Name=WP_001217059.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313125.1;locus_tag=AD11_RS25745;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217059.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 116139 118406 . - . ID=gene-AD11_RS25750;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AD11_RS25750;old_locus_tag=AD11_4561 NZ_JJLL01000163.1 Protein Homology CDS 116139 118406 . - 0 ID=cds-WP_001308282.1;Parent=gene-AD11_RS25750;Dbxref=GenBank:WP_001308282.1;Name=WP_001308282.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AD11_RS25750;product=arginine decarboxylase;protein_id=WP_001308282.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 118605 119513 . - . ID=gene-AD11_RS25755;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AD11_RS25755;old_locus_tag=AD11_4562 NZ_JJLL01000163.1 Protein Homology CDS 118605 119513 . - 0 ID=cds-WP_001090758.1;Parent=gene-AD11_RS25755;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AD11_RS25755;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 119796 121151 . + . ID=gene-AD11_RS25765;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AD11_RS25765;old_locus_tag=AD11_4563 NZ_JJLL01000163.1 Protein Homology CDS 119796 121151 . + 0 ID=cds-WP_000988031.1;Parent=gene-AD11_RS25765;Dbxref=GenBank:WP_000988031.1;Name=WP_000988031.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313128.1;locus_tag=AD11_RS25765;product=alpha-galactosidase;protein_id=WP_000988031.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 121254 122675 . + . ID=gene-AD11_RS25770;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AD11_RS25770;old_locus_tag=AD11_4564 NZ_JJLL01000163.1 Protein Homology CDS 121254 122675 . + 0 ID=cds-WP_033865898.1;Parent=gene-AD11_RS25770;Dbxref=GenBank:WP_033865898.1;Name=WP_033865898.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AD11_RS25770;product=melibiose:sodium transporter MelB;protein_id=WP_033865898.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 122814 123443 . - . ID=gene-AD11_RS25775;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AD11_RS25775;old_locus_tag=AD11_4565 NZ_JJLL01000163.1 Protein Homology CDS 122814 123443 . - 0 ID=cds-WP_000198754.1;Parent=gene-AD11_RS25775;Dbxref=GenBank:WP_000198754.1;Name=WP_000198754.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313130.1;locus_tag=AD11_RS25775;product=DUF2238 domain-containing protein;protein_id=WP_000198754.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 123566 125212 . - . ID=gene-AD11_RS25780;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AD11_RS25780;old_locus_tag=AD11_4566 NZ_JJLL01000163.1 Protein Homology CDS 123566 125212 . - 0 ID=cds-WP_000066681.1;Parent=gene-AD11_RS25780;Dbxref=GenBank:WP_000066681.1;Name=WP_000066681.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AD11_RS25780;product=class I fumarate hydratase;protein_id=WP_000066681.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 125290 126630 . - . ID=gene-AD11_RS25785;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AD11_RS25785;old_locus_tag=AD11_4567 NZ_JJLL01000163.1 Protein Homology CDS 125290 126630 . - 0 ID=cds-WP_000899522.1;Parent=gene-AD11_RS25785;Dbxref=GenBank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AD11_RS25785;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 127201 127920 . - . ID=gene-AD11_RS25795;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AD11_RS25795;old_locus_tag=AD11_4568 NZ_JJLL01000163.1 Protein Homology CDS 127201 127920 . - 0 ID=cds-WP_000611288.1;Parent=gene-AD11_RS25795;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AD11_RS25795;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 127917 129548 . - . ID=gene-AD11_RS25800;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AD11_RS25800;old_locus_tag=AD11_4569 NZ_JJLL01000163.1 Protein Homology CDS 127917 129548 . - 0 ID=cds-WP_001216477.1;Parent=gene-AD11_RS25800;Dbxref=GenBank:WP_001216477.1;Name=WP_001216477.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AD11_RS25800;product=sensor histidine kinase;protein_id=WP_001216477.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 129729 129959 . + . ID=gene-AD11_RS25805;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=AD11_RS25805;old_locus_tag=AD11_4571 NZ_JJLL01000163.1 Protein Homology CDS 129729 129959 . + 0 ID=cds-WP_000371700.1;Parent=gene-AD11_RS25805;Dbxref=GenBank:WP_000371700.1;Name=WP_000371700.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AD11_RS25805;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_000371700.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 129971 130243 . + . ID=gene-AD11_RS25810;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=AD11_RS25810;old_locus_tag=AD11_4572 NZ_JJLL01000163.1 Protein Homology CDS 129971 130243 . + 0 ID=cds-WP_000405647.1;Parent=gene-AD11_RS25810;Dbxref=GenBank:WP_000405647.1;Name=WP_000405647.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjdJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313136.1;locus_tag=AD11_RS25810;product=GNAT family N-acetyltransferase;protein_id=WP_000405647.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 130470 130766 . + . ID=gene-AD11_RS25815;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AD11_RS25815;old_locus_tag=AD11_4573 NZ_JJLL01000163.1 Protein Homology CDS 130470 130766 . + 0 ID=cds-WP_001425728.1;Parent=gene-AD11_RS25815;Dbxref=GenBank:WP_001425728.1;Name=WP_001425728.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AD11_RS25815;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_001425728.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 130794 130967 . + . ID=gene-AD11_RS25820;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AD11_RS25820;old_locus_tag=AD11_4574 NZ_JJLL01000163.1 Protein Homology CDS 130794 130967 . + 0 ID=cds-WP_001173343.1;Parent=gene-AD11_RS25820;Dbxref=GenBank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AD11_RS25820;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 131086 132603 . - . ID=gene-AD11_RS25825;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AD11_RS25825;old_locus_tag=AD11_4575 NZ_JJLL01000163.1 Protein Homology CDS 131086 132603 . - 0 ID=cds-WP_001295074.1;Parent=gene-AD11_RS25825;Dbxref=GenBank:WP_001295074.1;Name=WP_001295074.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AD11_RS25825;product=lysine--tRNA ligase;protein_id=WP_001295074.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 132840 134297 . - . ID=gene-AD11_RS25830;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=AD11_RS25830;old_locus_tag=AD11_4576 NZ_JJLL01000163.1 Protein Homology CDS 132840 134297 . - 0 ID=cds-WP_000856829.1;Parent=gene-AD11_RS25830;Dbxref=GenBank:WP_000856829.1;Name=WP_000856829.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418554.1;locus_tag=AD11_RS25830;product=dipeptide/tripeptide permease DtpC;protein_id=WP_000856829.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 134356 136503 . - . ID=gene-AD11_RS25835;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=AD11_RS25835;old_locus_tag=AD11_4577 NZ_JJLL01000163.1 Protein Homology CDS 134356 136503 . - 0 ID=cds-WP_001295383.1;Parent=gene-AD11_RS25835;Dbxref=GenBank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=AD11_RS25835;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 136583 137917 . - . ID=gene-AD11_RS25840;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AD11_RS25840;old_locus_tag=AD11_4578 NZ_JJLL01000163.1 Protein Homology CDS 136583 137917 . - 0 ID=cds-WP_033865901.1;Parent=gene-AD11_RS25840;Dbxref=GenBank:WP_033865901.1;Name=WP_033865901.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=AD11_RS25840;product=cadaverine/lysine antiporter;protein_id=WP_033865901.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 138283 139821 . - . ID=gene-AD11_RS25845;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=AD11_RS25845;old_locus_tag=AD11_4579 NZ_JJLL01000163.1 Protein Homology CDS 138283 139821 . - 0 ID=cds-WP_033865902.1;Parent=gene-AD11_RS25845;Dbxref=GenBank:WP_033865902.1;Name=WP_033865902.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313142.1;locus_tag=AD11_RS25845;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_033865902.1;transl_table=11 NZ_JJLL01000163.1 RefSeq pseudogene 140081 140240 . - . ID=gene-AD11_RS33065;Name=AD11_RS33065;end_range=140240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS33065;partial=true;pseudo=true NZ_JJLL01000163.1 Protein Homology CDS 140081 140240 . - 0 ID=cds-AD11_RS33065;Parent=gene-AD11_RS33065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=140240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218818.1;locus_tag=AD11_RS33065;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 140570 141412 . - . ID=gene-AD11_RS25850;Name=AD11_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25850;old_locus_tag=AD11_4580 NZ_JJLL01000163.1 Protein Homology CDS 140570 141412 . - 0 ID=cds-WP_022645115.1;Parent=gene-AD11_RS25850;Dbxref=GenBank:WP_022645115.1;Name=WP_022645115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708776.1;locus_tag=AD11_RS25850;product=DUF4942 domain-containing protein;protein_id=WP_022645115.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 141497 141691 . - . ID=gene-AD11_RS32255;Name=AD11_RS32255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32255 NZ_JJLL01000163.1 Protein Homology CDS 141497 141691 . - 0 ID=cds-WP_024181941.1;Parent=gene-AD11_RS32255;Dbxref=GenBank:WP_024181941.1;Name=WP_024181941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001560290.1;locus_tag=AD11_RS32255;product=DUF957 domain-containing protein;protein_id=WP_024181941.1;transl_table=11 NZ_JJLL01000163.1 RefSeq pseudogene 141743 141919 . - . ID=gene-AD11_RS32260;Name=AD11_RS32260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32260;partial=true;pseudo=true;start_range=.,141743 NZ_JJLL01000163.1 Protein Homology CDS 141743 141919 . - 0 ID=cds-AD11_RS32260;Parent=gene-AD11_RS32260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312567.3;locus_tag=AD11_RS32260;partial=true;product=DUF5983 family protein;pseudo=true;start_range=.,141743;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 141916 142293 . - . ID=gene-AD11_RS25865;Name=AD11_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25865;old_locus_tag=AD11_4582 NZ_JJLL01000163.1 Protein Homology CDS 141916 142293 . - 0 ID=cds-WP_029701676.1;Parent=gene-AD11_RS25865;Dbxref=GenBank:WP_029701676.1;Name=WP_029701676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708773.1;locus_tag=AD11_RS25865;product=TA system toxin CbtA family protein;protein_id=WP_029701676.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 142383 142751 . - . ID=gene-AD11_RS25870;Name=AD11_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25870;old_locus_tag=AD11_4583 NZ_JJLL01000163.1 Protein Homology CDS 142383 142751 . - 0 ID=cds-WP_021553056.1;Parent=gene-AD11_RS25870;Dbxref=GenBank:WP_021553056.1;Name=WP_021553056.1;Ontology_term=GO:0051495;gbkey=CDS;go_process=positive regulation of cytoskeleton organization|0051495||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280950.1;locus_tag=AD11_RS25870;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_021553056.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 142914 143135 . - . ID=gene-AD11_RS25880;Name=AD11_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25880;old_locus_tag=AD11_4585 NZ_JJLL01000163.1 Protein Homology CDS 142914 143135 . - 0 ID=cds-WP_000692345.1;Parent=gene-AD11_RS25880;Dbxref=GenBank:WP_000692345.1;Name=WP_000692345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AD11_RS25880;product=DUF987 domain-containing protein;protein_id=WP_000692345.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 143200 143676 . - . ID=gene-AD11_RS25885;Name=AD11_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25885;old_locus_tag=AD11_4586 NZ_JJLL01000163.1 Protein Homology CDS 143200 143676 . - 0 ID=cds-WP_001702597.1;Parent=gene-AD11_RS25885;Dbxref=GenBank:WP_001702597.1;Name=WP_001702597.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AD11_RS25885;product=JAB domain-containing protein;protein_id=WP_001702597.1;transl_table=11 NZ_JJLL01000163.1 RefSeq gene 143692 144171 . - . ID=gene-AD11_RS25890;Name=AD11_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25890;old_locus_tag=AD11_4587 NZ_JJLL01000163.1 Protein Homology CDS 143692 144171 . - 0 ID=cds-WP_000860084.1;Parent=gene-AD11_RS25890;Dbxref=GenBank:WP_000860084.1;Name=WP_000860084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310829.1;locus_tag=AD11_RS25890;product=antirestriction protein;protein_id=WP_000860084.1;transl_table=11 ##sequence-region NZ_JJLL01000164.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000164.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000164.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000164.1 RefSeq gene 197 272 . + . ID=gene-AD11_RS25895;Name=AD11_RS25895;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS25895;old_locus_tag=AD11_4588 NZ_JJLL01000164.1 tRNAscan-SE tRNA 197 272 . + . ID=rna-AD11_RS25895;Parent=gene-AD11_RS25895;anticodon=(pos:230..232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25895;product=tRNA-Gly NZ_JJLL01000164.1 tRNAscan-SE exon 197 272 . + . ID=exon-AD11_RS25895-1;Parent=rna-AD11_RS25895;anticodon=(pos:230..232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25895;product=tRNA-Gly NZ_JJLL01000164.1 RefSeq gene 308 383 . + . ID=gene-AD11_RS25900;Name=AD11_RS25900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS25900;old_locus_tag=AD11_4589 NZ_JJLL01000164.1 tRNAscan-SE tRNA 308 383 . + . ID=rna-AD11_RS25900;Parent=gene-AD11_RS25900;anticodon=(pos:341..343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25900;product=tRNA-Gly NZ_JJLL01000164.1 tRNAscan-SE exon 308 383 . + . ID=exon-AD11_RS25900-1;Parent=rna-AD11_RS25900;anticodon=(pos:341..343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25900;product=tRNA-Gly NZ_JJLL01000164.1 RefSeq gene 617 670 . + . ID=gene-AD11_RS31815;Name=AD11_RS31815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31815 NZ_JJLL01000164.1 Protein Homology CDS 617 670 . + 0 ID=cds-WP_010723271.1;Parent=gene-AD11_RS31815;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AD11_RS31815;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JJLL01000164.1 RefSeq gene 653 1792 . - . ID=gene-AD11_RS25905;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AD11_RS25905;old_locus_tag=AD11_4590 NZ_JJLL01000164.1 Protein Homology CDS 653 1792 . - 0 ID=cds-WP_001294213.1;Parent=gene-AD11_RS25905;Dbxref=GenBank:WP_001294213.1;Name=WP_001294213.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AD11_RS25905;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294213.1;transl_table=11 NZ_JJLL01000164.1 RefSeq gene 1791 2047 . + . ID=gene-AD11_RS25910;Name=AD11_RS25910;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25910;old_locus_tag=AD11_4591;partial=true NZ_JJLL01000164.1 Protein Homology CDS 1791 2047 . + 0 ID=cds-WP_033866548.1;Parent=gene-AD11_RS25910;Dbxref=GenBank:WP_033866548.1;Name=WP_033866548.1;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AD11_RS25910;partial=true;product=NAD(P)H-hydrate epimerase;protein_id=WP_033866548.1;transl_table=11 ##sequence-region NZ_JJLL01000165.1 1 92772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000165.1 RefSeq region 1 92772 . + . ID=NZ_JJLL01000165.1:1..92772;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000165.1 RefSeq pseudogene 1 583 . - . ID=gene-AD11_RS30180;Name=AD11_RS30180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30180;old_locus_tag=AD11_4592;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000165.1 Protein Homology CDS 1 583 . - 0 ID=cds-AD11_RS30180;Parent=gene-AD11_RS30180;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AD11_RS30180;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 740 970 . - . ID=gene-AD11_RS33070;Name=AD11_RS33070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33070;old_locus_tag=AD11_4593 NZ_JJLL01000165.1 Protein Homology CDS 740 970 . - 0 ID=cds-WP_001333708.1;Parent=gene-AD11_RS33070;Dbxref=GenBank:WP_001333708.1;Name=WP_001333708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327330.1;locus_tag=AD11_RS33070;product=hypothetical protein;protein_id=WP_001333708.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 1113 2156 . - . ID=gene-AD11_RS25925;Name=AD11_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25925;old_locus_tag=AD11_4594 NZ_JJLL01000165.1 Protein Homology CDS 1113 2156 . - 0 ID=cds-WP_000147018.1;Parent=gene-AD11_RS25925;Dbxref=GenBank:WP_000147018.1;Name=WP_000147018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709438.1;locus_tag=AD11_RS25925;product=hypothetical protein;protein_id=WP_000147018.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 2412 3677 . - . ID=gene-AD11_RS25930;Name=AD11_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS25930;old_locus_tag=AD11_4595 NZ_JJLL01000165.1 Protein Homology CDS 2412 3677 . - 0 ID=cds-WP_001218869.1;Parent=gene-AD11_RS25930;Dbxref=GenBank:WP_001218869.1;Name=WP_001218869.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311870.1;locus_tag=AD11_RS25930;product=tyrosine-type recombinase/integrase;protein_id=WP_001218869.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 3875 3950 . - . ID=gene-AD11_RS25935;Name=AD11_RS25935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS25935;old_locus_tag=AD11_4596 NZ_JJLL01000165.1 tRNAscan-SE tRNA 3875 3950 . - . ID=rna-AD11_RS25935;Parent=gene-AD11_RS25935;anticodon=(pos:complement(3915..3917));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25935;product=tRNA-Phe NZ_JJLL01000165.1 tRNAscan-SE exon 3875 3950 . - . ID=exon-AD11_RS25935-1;Parent=rna-AD11_RS25935;anticodon=(pos:complement(3915..3917));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS25935;product=tRNA-Phe NZ_JJLL01000165.1 RefSeq gene 4057 4632 . - . ID=gene-AD11_RS25940;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AD11_RS25940;old_locus_tag=AD11_4597 NZ_JJLL01000165.1 Protein Homology CDS 4057 4632 . - 0 ID=cds-WP_001188520.1;Parent=gene-AD11_RS25940;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AD11_RS25940;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 4669 6366 . - . ID=gene-AD11_RS25945;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AD11_RS25945;old_locus_tag=AD11_4598 NZ_JJLL01000165.1 Protein Homology CDS 4669 6366 . - 0 ID=cds-WP_033865929.1;Parent=gene-AD11_RS25945;Dbxref=GenBank:WP_033865929.1;Name=WP_033865929.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710001.1;locus_tag=AD11_RS25945;product=protein-disulfide reductase DsbD;protein_id=WP_033865929.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 6342 6680 . - . ID=gene-AD11_RS25950;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AD11_RS25950;old_locus_tag=AD11_4599 NZ_JJLL01000165.1 Protein Homology CDS 6342 6680 . - 0 ID=cds-WP_033865931.1;Parent=gene-AD11_RS25950;Dbxref=GenBank:WP_033865931.1;Name=WP_033865931.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AD11_RS25950;product=divalent cation tolerance protein CutA;protein_id=WP_033865931.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 6796 8097 . - . ID=gene-AD11_RS25955;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AD11_RS25955;old_locus_tag=AD11_4600 NZ_JJLL01000165.1 Protein Homology CDS 6796 8097 . - 0 ID=cds-WP_000961959.1;Parent=gene-AD11_RS25955;Dbxref=GenBank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AD11_RS25955;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 8215 9651 . - . ID=gene-AD11_RS25960;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AD11_RS25960;old_locus_tag=AD11_4601 NZ_JJLL01000165.1 Protein Homology CDS 8215 9651 . - 0 ID=cds-WP_000069437.1;Parent=gene-AD11_RS25960;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AD11_RS25960;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 9988 10464 . + . ID=gene-AD11_RS25965;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AD11_RS25965;old_locus_tag=AD11_4602 NZ_JJLL01000165.1 Protein Homology CDS 9988 10464 . + 0 ID=cds-WP_001267448.1;Parent=gene-AD11_RS25965;Dbxref=GenBank:WP_001267448.1;Name=WP_001267448.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AD11_RS25965;product=FxsA family protein;protein_id=WP_001267448.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 10480 11736 . - . ID=gene-AD11_RS25970;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AD11_RS25970;old_locus_tag=AD11_4603 NZ_JJLL01000165.1 Protein Homology CDS 10480 11736 . - 0 ID=cds-WP_000015836.1;Parent=gene-AD11_RS25970;Dbxref=GenBank:WP_000015836.1;Name=WP_000015836.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418565.1;locus_tag=AD11_RS25970;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015836.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 12012 12305 . + . ID=gene-AD11_RS25975;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AD11_RS25975;old_locus_tag=AD11_4604 NZ_JJLL01000165.1 Protein Homology CDS 12012 12305 . + 0 ID=cds-WP_001026276.1;Parent=gene-AD11_RS25975;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AD11_RS25975;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 12349 13995 . + . ID=gene-AD11_RS25980;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AD11_RS25980;old_locus_tag=AD11_4605 NZ_JJLL01000165.1 Protein Homology CDS 12349 13995 . + 0 ID=cds-WP_000729117.1;Parent=gene-AD11_RS25980;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AD11_RS25980;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 14133 14486 . + . ID=gene-AD11_RS25985;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AD11_RS25985;old_locus_tag=AD11_4606 NZ_JJLL01000165.1 Protein Homology CDS 14133 14486 . + 0 ID=cds-WP_000558209.1;Parent=gene-AD11_RS25985;Dbxref=GenBank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AD11_RS25985;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 14679 15548 . - . ID=gene-AD11_RS25990;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AD11_RS25990;old_locus_tag=AD11_4607 NZ_JJLL01000165.1 Protein Homology CDS 14679 15548 . - 0 ID=cds-WP_001008071.1;Parent=gene-AD11_RS25990;Dbxref=GenBank:WP_001008071.1;Name=WP_001008071.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710010.2;locus_tag=AD11_RS25990;product=YjeJ family protein;protein_id=WP_001008071.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 15943 16971 . - . ID=gene-AD11_RS25995;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AD11_RS25995;old_locus_tag=AD11_4608 NZ_JJLL01000165.1 Protein Homology CDS 15943 16971 . - 0 ID=cds-WP_000940530.1;Parent=gene-AD11_RS25995;Dbxref=GenBank:WP_000940530.1;Name=WP_000940530.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710013.1;locus_tag=AD11_RS25995;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940530.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 17013 17579 . + . ID=gene-AD11_RS26000;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AD11_RS26000;old_locus_tag=AD11_4609 NZ_JJLL01000165.1 Protein Homology CDS 17013 17579 . + 0 ID=cds-WP_000257278.1;Parent=gene-AD11_RS26000;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AD11_RS26000;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 17631 17756 . + . ID=gene-AD11_RS26005;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AD11_RS26005;old_locus_tag=AD11_4610 NZ_JJLL01000165.1 Protein Homology CDS 17631 17756 . + 0 ID=cds-WP_000977757.1;Parent=gene-AD11_RS26005;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AD11_RS26005;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 17867 18013 . + . ID=gene-AD11_RS26010;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AD11_RS26010;old_locus_tag=AD11_4611 NZ_JJLL01000165.1 Protein Homology CDS 17867 18013 . + 0 ID=cds-WP_000239596.1;Parent=gene-AD11_RS26010;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AD11_RS26010;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 18188 18505 . + . ID=gene-AD11_RS26015;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AD11_RS26015;old_locus_tag=AD11_4612 NZ_JJLL01000165.1 Protein Homology CDS 18188 18505 . + 0 ID=cds-WP_000118482.1;Parent=gene-AD11_RS26015;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AD11_RS26015;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 18502 19035 . - . ID=gene-AD11_RS26020;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AD11_RS26020;old_locus_tag=AD11_4613 NZ_JJLL01000165.1 Protein Homology CDS 18502 19035 . - 0 ID=cds-WP_001238378.1;Parent=gene-AD11_RS26020;Dbxref=GenBank:WP_001238378.1;Name=WP_001238378.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AD11_RS26020;product=lipocalin Blc;protein_id=WP_001238378.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 19124 20257 . - . ID=gene-AD11_RS26025;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AD11_RS26025;old_locus_tag=AD11_4614 NZ_JJLL01000165.1 Protein Homology CDS 19124 20257 . - 0 ID=cds-WP_033865934.1;Parent=gene-AD11_RS26025;Dbxref=GenBank:WP_033865934.1;Name=WP_033865934.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AD11_RS26025;product=BlaEC family class C beta-lactamase;protein_id=WP_033865934.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 20321 20680 . - . ID=gene-AD11_RS26030;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AD11_RS26030;old_locus_tag=AD11_4615 NZ_JJLL01000165.1 Protein Homology CDS 20321 20680 . - 0 ID=cds-WP_000609663.1;Parent=gene-AD11_RS26030;Dbxref=GenBank:WP_000609663.1;Name=WP_000609663.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AD11_RS26030;product=fumarate reductase subunit FrdD;protein_id=WP_000609663.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 20691 21086 . - . ID=gene-AD11_RS26035;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AD11_RS26035;old_locus_tag=AD11_4616 NZ_JJLL01000165.1 Protein Homology CDS 20691 21086 . - 0 ID=cds-WP_000208757.1;Parent=gene-AD11_RS26035;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AD11_RS26035;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 21097 21831 . - . ID=gene-AD11_RS26040;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AD11_RS26040;old_locus_tag=AD11_4617 NZ_JJLL01000165.1 Protein Homology CDS 21097 21831 . - 0 ID=cds-WP_000829498.1;Parent=gene-AD11_RS26040;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AD11_RS26040;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 21824 23632 . - . ID=gene-AD11_RS26045;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AD11_RS26045;old_locus_tag=AD11_4618 NZ_JJLL01000165.1 Protein Homology CDS 21824 23632 . - 0 ID=cds-WP_001192973.1;Parent=gene-AD11_RS26045;Dbxref=GenBank:WP_001192973.1;Name=WP_001192973.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AD11_RS26045;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 23957 24934 . + . ID=gene-AD11_RS26050;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AD11_RS26050;old_locus_tag=AD11_4619 NZ_JJLL01000165.1 Protein Homology CDS 23957 24934 . + 0 ID=cds-WP_000004770.1;Parent=gene-AD11_RS26050;Dbxref=GenBank:WP_000004770.1;Name=WP_000004770.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AD11_RS26050;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004770.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 25153 26655 . + . ID=gene-AD11_RS26055;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AD11_RS26055;old_locus_tag=AD11_4620 NZ_JJLL01000165.1 Protein Homology CDS 25153 26655 . + 0 ID=cds-WP_016236428.1;Parent=gene-AD11_RS26055;Dbxref=GenBank:WP_016236428.1;Name=WP_016236428.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AD11_RS26055;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_016236428.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 26806 30129 . - . ID=gene-AD11_RS26060;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AD11_RS26060;old_locus_tag=AD11_4621 NZ_JJLL01000165.1 Protein Homology CDS 26806 30129 . - 0 ID=cds-WP_001236850.1;Parent=gene-AD11_RS26060;Dbxref=GenBank:WP_001236850.1;Name=WP_001236850.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AD11_RS26060;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236850.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 30151 31119 . - . ID=gene-AD11_RS26065;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AD11_RS26065;old_locus_tag=AD11_4622 NZ_JJLL01000165.1 Protein Homology CDS 30151 31119 . - 0 ID=cds-WP_000934920.1;Parent=gene-AD11_RS26065;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AD11_RS26065;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 31216 32268 . - . ID=gene-AD11_RS26070;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AD11_RS26070;old_locus_tag=AD11_4623 NZ_JJLL01000165.1 Protein Homology CDS 31216 32268 . - 0 ID=cds-WP_000041970.1;Parent=gene-AD11_RS26070;Dbxref=GenBank:WP_000041970.1;Name=WP_000041970.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AD11_RS26070;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041970.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 32363 32908 . + . ID=gene-AD11_RS26075;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AD11_RS26075;old_locus_tag=AD11_4624 NZ_JJLL01000165.1 Protein Homology CDS 32363 32908 . + 0 ID=cds-WP_001295188.1;Parent=gene-AD11_RS26075;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AD11_RS26075;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 33119 33194 . + . ID=gene-AD11_RS26080;Name=AD11_RS26080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS26080;old_locus_tag=AD11_4625 NZ_JJLL01000165.1 tRNAscan-SE tRNA 33119 33194 . + . ID=rna-AD11_RS26080;Parent=gene-AD11_RS26080;anticodon=(pos:33152..33154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26080;product=tRNA-Gly NZ_JJLL01000165.1 tRNAscan-SE exon 33119 33194 . + . ID=exon-AD11_RS26080-1;Parent=rna-AD11_RS26080;anticodon=(pos:33152..33154);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26080;product=tRNA-Gly NZ_JJLL01000165.1 RefSeq gene 33352 33427 . + . ID=gene-AD11_RS26085;Name=AD11_RS26085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS26085;old_locus_tag=AD11_4626 NZ_JJLL01000165.1 tRNAscan-SE tRNA 33352 33427 . + . ID=rna-AD11_RS26085;Parent=gene-AD11_RS26085;anticodon=(pos:33385..33387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26085;product=tRNA-Gly NZ_JJLL01000165.1 tRNAscan-SE exon 33352 33427 . + . ID=exon-AD11_RS26085-1;Parent=rna-AD11_RS26085;anticodon=(pos:33385..33387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26085;product=tRNA-Gly NZ_JJLL01000165.1 RefSeq gene 33463 33538 . + . ID=gene-AD11_RS26090;Name=AD11_RS26090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS26090;old_locus_tag=AD11_4627 NZ_JJLL01000165.1 tRNAscan-SE tRNA 33463 33538 . + . ID=rna-AD11_RS26090;Parent=gene-AD11_RS26090;anticodon=(pos:33496..33498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26090;product=tRNA-Gly NZ_JJLL01000165.1 tRNAscan-SE exon 33463 33538 . + . ID=exon-AD11_RS26090-1;Parent=rna-AD11_RS26090;anticodon=(pos:33496..33498);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26090;product=tRNA-Gly NZ_JJLL01000165.1 RefSeq gene 33574 33649 . + . ID=gene-AD11_RS26095;Name=AD11_RS26095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS26095;old_locus_tag=AD11_4628 NZ_JJLL01000165.1 tRNAscan-SE tRNA 33574 33649 . + . ID=rna-AD11_RS26095;Parent=gene-AD11_RS26095;anticodon=(pos:33607..33609);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26095;product=tRNA-Gly NZ_JJLL01000165.1 tRNAscan-SE exon 33574 33649 . + . ID=exon-AD11_RS26095-1;Parent=rna-AD11_RS26095;anticodon=(pos:33607..33609);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26095;product=tRNA-Gly NZ_JJLL01000165.1 RefSeq gene 33685 33760 . + . ID=gene-AD11_RS26100;Name=AD11_RS26100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS26100;old_locus_tag=AD11_4629 NZ_JJLL01000165.1 tRNAscan-SE tRNA 33685 33760 . + . ID=rna-AD11_RS26100;Parent=gene-AD11_RS26100;anticodon=(pos:33718..33720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26100;product=tRNA-Gly NZ_JJLL01000165.1 tRNAscan-SE exon 33685 33760 . + . ID=exon-AD11_RS26100-1;Parent=rna-AD11_RS26100;anticodon=(pos:33718..33720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26100;product=tRNA-Gly NZ_JJLL01000165.1 RefSeq gene 33994 34047 . + . ID=gene-AD11_RS31820;Name=AD11_RS31820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31820 NZ_JJLL01000165.1 Protein Homology CDS 33994 34047 . + 0 ID=cds-WP_010723271.1-2;Parent=gene-AD11_RS31820;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AD11_RS31820;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 34030 35169 . - . ID=gene-AD11_RS26105;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AD11_RS26105;old_locus_tag=AD11_4630 NZ_JJLL01000165.1 Protein Homology CDS 34030 35169 . - 0 ID=cds-WP_001294213.1-2;Parent=gene-AD11_RS26105;Dbxref=GenBank:WP_001294213.1;Name=WP_001294213.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AD11_RS26105;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294213.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 35168 36715 . + . ID=gene-AD11_RS26110;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AD11_RS26110;old_locus_tag=AD11_4631 NZ_JJLL01000165.1 Protein Homology CDS 35168 36715 . + 0 ID=cds-WP_072280414.1;Parent=gene-AD11_RS26110;Dbxref=GenBank:WP_072280414.1;Name=WP_072280414.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AD11_RS26110;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_072280414.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 36687 37148 . + . ID=gene-AD11_RS26115;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AD11_RS26115;old_locus_tag=AD11_4632 NZ_JJLL01000165.1 Protein Homology CDS 36687 37148 . + 0 ID=cds-WP_000981977.1;Parent=gene-AD11_RS26115;Dbxref=GenBank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AD11_RS26115;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 37167 38504 . + . ID=gene-AD11_RS26120;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AD11_RS26120;old_locus_tag=AD11_4633 NZ_JJLL01000165.1 Protein Homology CDS 37167 38504 . + 0 ID=cds-WP_000990294.1;Parent=gene-AD11_RS26120;Dbxref=GenBank:WP_000990294.1;Name=WP_000990294.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313172.1;locus_tag=AD11_RS26120;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_000990294.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 38514 40361 . + . ID=gene-AD11_RS26125;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AD11_RS26125;old_locus_tag=AD11_4634 NZ_JJLL01000165.1 Protein Homology CDS 38514 40361 . + 0 ID=cds-WP_001122521.1;Parent=gene-AD11_RS26125;Dbxref=GenBank:WP_001122521.1;Name=WP_001122521.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418591.1;locus_tag=AD11_RS26125;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122521.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 40354 41304 . + . ID=gene-AD11_RS26130;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AD11_RS26130;old_locus_tag=AD11_4635 NZ_JJLL01000165.1 Protein Homology CDS 40354 41304 . + 0 ID=cds-WP_001280345.1;Parent=gene-AD11_RS26130;Dbxref=GenBank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AD11_RS26130;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 41390 41698 . + . ID=gene-AD11_RS26135;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AD11_RS26135;old_locus_tag=AD11_4636 NZ_JJLL01000165.1 Protein Homology CDS 41390 41698 . + 0 ID=cds-WP_001051883.1;Parent=gene-AD11_RS26135;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AD11_RS26135;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 41775 43055 . + . ID=gene-AD11_RS26140;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AD11_RS26140;old_locus_tag=AD11_4637 NZ_JJLL01000165.1 Protein Homology CDS 41775 43055 . + 0 ID=cds-WP_000460360.1;Parent=gene-AD11_RS26140;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AD11_RS26140;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 43141 44400 . + . ID=gene-AD11_RS26145;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AD11_RS26145;old_locus_tag=AD11_4638 NZ_JJLL01000165.1 Protein Homology CDS 43141 44400 . + 0 ID=cds-WP_000312488.1;Parent=gene-AD11_RS26145;Dbxref=GenBank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AD11_RS26145;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 44403 45407 . + . ID=gene-AD11_RS26150;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AD11_RS26150;old_locus_tag=AD11_4639 NZ_JJLL01000165.1 Protein Homology CDS 44403 45407 . + 0 ID=cds-WP_001232412.1;Parent=gene-AD11_RS26150;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AD11_RS26150;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 45489 45686 . + . ID=gene-AD11_RS26155;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AD11_RS26155;old_locus_tag=AD11_4640 NZ_JJLL01000165.1 Protein Homology CDS 45489 45686 . + 0 ID=cds-WP_001089295.1;Parent=gene-AD11_RS26155;Dbxref=GenBank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AD11_RS26155;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 45790 47088 . + . ID=gene-AD11_RS26160;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AD11_RS26160;old_locus_tag=AD11_4641 NZ_JJLL01000165.1 Protein Homology CDS 45790 47088 . + 0 ID=cds-WP_000527955.1;Parent=gene-AD11_RS26160;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AD11_RS26160;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 47293 47718 . + . ID=gene-AD11_RS26165;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AD11_RS26165;old_locus_tag=AD11_4642 NZ_JJLL01000165.1 Protein Homology CDS 47293 47718 . + 0 ID=cds-WP_001177643.1;Parent=gene-AD11_RS26165;Dbxref=GenBank:WP_001177643.1;Name=WP_001177643.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AD11_RS26165;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177643.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 47757 50198 . + . ID=gene-AD11_RS26170;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AD11_RS26170;old_locus_tag=AD11_4643 NZ_JJLL01000165.1 Protein Homology CDS 47757 50198 . + 0 ID=cds-WP_000076316.1;Parent=gene-AD11_RS26170;Dbxref=GenBank:WP_000076316.1;Name=WP_000076316.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AD11_RS26170;product=ribonuclease R;protein_id=WP_000076316.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 50378 51109 . + . ID=gene-AD11_RS26175;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AD11_RS26175;old_locus_tag=AD11_4644 NZ_JJLL01000165.1 Protein Homology CDS 50378 51109 . + 0 ID=cds-WP_001293282.1;Parent=gene-AD11_RS26175;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AD11_RS26175;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 51186 51965 . - . ID=gene-AD11_RS26180;Name=AD11_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26180;old_locus_tag=AD11_4645 NZ_JJLL01000165.1 Protein Homology CDS 51186 51965 . - 0 ID=cds-WP_000400401.1;Parent=gene-AD11_RS26180;Dbxref=GenBank:WP_000400401.1;Name=WP_000400401.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400401.1;locus_tag=AD11_RS26180;product=IclR family transcriptional regulator;protein_id=WP_000400401.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 52294 53187 . + . ID=gene-AD11_RS26185;Name=AD11_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26185;old_locus_tag=AD11_4646 NZ_JJLL01000165.1 Protein Homology CDS 52294 53187 . + 0 ID=cds-WP_000842398.1;Parent=gene-AD11_RS26185;Dbxref=GenBank:WP_000842398.1;Name=WP_000842398.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020240475.1;locus_tag=AD11_RS26185;product=dihydrodipicolinate synthase family protein;protein_id=WP_000842398.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 53238 54539 . + . ID=gene-AD11_RS26190;Name=AD11_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26190;old_locus_tag=AD11_4647 NZ_JJLL01000165.1 Protein Homology CDS 53238 54539 . + 0 ID=cds-WP_001284216.1;Parent=gene-AD11_RS26190;Dbxref=GenBank:WP_001284216.1;Name=WP_001284216.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284214.1;locus_tag=AD11_RS26190;product=MFS transporter;protein_id=WP_001284216.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 54573 56168 . + . ID=gene-AD11_RS26195;Name=AD11_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26195;old_locus_tag=AD11_4648 NZ_JJLL01000165.1 Protein Homology CDS 54573 56168 . + 0 ID=cds-WP_024186871.1;Parent=gene-AD11_RS26195;Dbxref=GenBank:WP_024186871.1;Name=WP_024186871.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870187.1;locus_tag=AD11_RS26195;product=UxaA family hydrolase;protein_id=WP_024186871.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 56358 56759 . + . ID=gene-AD11_RS26200;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=AD11_RS26200;old_locus_tag=AD11_4649 NZ_JJLL01000165.1 Protein Homology CDS 56358 56759 . + 0 ID=cds-WP_033865941.1;Parent=gene-AD11_RS26200;Dbxref=GenBank:WP_033865941.1;Name=WP_033865941.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AD11_RS26200;product=YjfI family protein;protein_id=WP_033865941.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 56778 57476 . + . ID=gene-AD11_RS26205;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=AD11_RS26205;old_locus_tag=AD11_4650 NZ_JJLL01000165.1 Protein Homology CDS 56778 57476 . + 0 ID=cds-WP_000511960.1;Parent=gene-AD11_RS26205;Dbxref=GenBank:WP_000511960.1;Name=WP_000511960.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AD11_RS26205;product=PspA/IM30 family protein;protein_id=WP_000511960.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 57527 58186 . + . ID=gene-AD11_RS26210;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=AD11_RS26210;old_locus_tag=AD11_4651 NZ_JJLL01000165.1 Protein Homology CDS 57527 58186 . + 0 ID=cds-WP_000012566.1;Parent=gene-AD11_RS26210;Dbxref=GenBank:WP_000012566.1;Name=WP_000012566.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AD11_RS26210;product=YjfK family protein;protein_id=WP_000012566.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 58204 58602 . + . ID=gene-AD11_RS26215;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=AD11_RS26215;old_locus_tag=AD11_4652 NZ_JJLL01000165.1 Protein Homology CDS 58204 58602 . + 0 ID=cds-WP_000547760.1;Parent=gene-AD11_RS26215;Dbxref=GenBank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AD11_RS26215;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 58612 59250 . + . ID=gene-AD11_RS26220;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=AD11_RS26220;old_locus_tag=AD11_4653 NZ_JJLL01000165.1 Protein Homology CDS 58612 59250 . + 0 ID=cds-WP_000101678.1;Parent=gene-AD11_RS26220;Dbxref=GenBank:WP_000101678.1;Name=WP_000101678.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313188.1;locus_tag=AD11_RS26220;product=DUF1190 domain-containing protein;protein_id=WP_000101678.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 59253 60416 . + . ID=gene-AD11_RS26225;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AD11_RS26225;old_locus_tag=AD11_4654 NZ_JJLL01000165.1 Protein Homology CDS 59253 60416 . + 0 ID=cds-WP_033865942.1;Parent=gene-AD11_RS26225;Dbxref=GenBank:WP_033865942.1;Name=WP_033865942.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313189.1;locus_tag=AD11_RS26225;product=glutathionylspermidine synthase family protein;protein_id=WP_033865942.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 60500 62125 . + . ID=gene-AD11_RS26230;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AD11_RS26230;old_locus_tag=AD11_4655 NZ_JJLL01000165.1 Protein Homology CDS 60500 62125 . + 0 ID=cds-WP_001295190.1;Parent=gene-AD11_RS26230;Dbxref=GenBank:WP_001295190.1;Name=WP_001295190.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AD11_RS26230;product=isovaleryl-CoA dehydrogenase;protein_id=WP_001295190.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 62242 62517 . - . ID=gene-AD11_RS26235;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AD11_RS26235;old_locus_tag=AD11_4656 NZ_JJLL01000165.1 Protein Homology CDS 62242 62517 . - 0 ID=cds-WP_000811566.1;Parent=gene-AD11_RS26235;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AD11_RS26235;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 62666 62995 . - . ID=gene-AD11_RS26240;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AD11_RS26240;old_locus_tag=AD11_4657 NZ_JJLL01000165.1 Protein Homology CDS 62666 62995 . - 0 ID=cds-WP_000254636.1;Parent=gene-AD11_RS26240;Dbxref=GenBank:WP_000254636.1;Name=WP_000254636.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313192.2;locus_tag=AD11_RS26240;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254636.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 63177 63926 . + . ID=gene-AD11_RS26245;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AD11_RS26245;old_locus_tag=AD11_4658 NZ_JJLL01000165.1 Protein Homology CDS 63177 63926 . + 0 ID=cds-WP_000569679.1;Parent=gene-AD11_RS26245;Dbxref=GenBank:WP_000569679.1;Name=WP_000569679.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313193.1;locus_tag=AD11_RS26245;product=esterase;protein_id=WP_000569679.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 63923 64678 . - . ID=gene-AD11_RS26250;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AD11_RS26250;old_locus_tag=AD11_4659 NZ_JJLL01000165.1 Protein Homology CDS 63923 64678 . - 0 ID=cds-WP_000133631.1;Parent=gene-AD11_RS26250;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AD11_RS26250;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 64786 65850 . - . ID=gene-AD11_RS26255;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AD11_RS26255;old_locus_tag=AD11_4660 NZ_JJLL01000165.1 Protein Homology CDS 64786 65850 . - 0 ID=cds-WP_001295191.1;Parent=gene-AD11_RS26255;Dbxref=GenBank:WP_001295191.1;Name=WP_001295191.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AD11_RS26255;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001295191.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 66205 67602 . + . ID=gene-AD11_RS26260;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AD11_RS26260;old_locus_tag=AD11_4661 NZ_JJLL01000165.1 Protein Homology CDS 66205 67602 . + 0 ID=cds-WP_033865943.1;Parent=gene-AD11_RS26260;Dbxref=GenBank:WP_033865943.1;Name=WP_033865943.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AD11_RS26260;product=PTS ascorbate transporter subunit IIC;protein_id=WP_033865943.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 67618 67923 . + . ID=gene-AD11_RS26265;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AD11_RS26265;old_locus_tag=AD11_4662 NZ_JJLL01000165.1 Protein Homology CDS 67618 67923 . + 0 ID=cds-WP_000218362.1;Parent=gene-AD11_RS26265;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AD11_RS26265;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 67933 68397 . + . ID=gene-AD11_RS26270;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AD11_RS26270;old_locus_tag=AD11_4663 NZ_JJLL01000165.1 Protein Homology CDS 67933 68397 . + 0 ID=cds-WP_000776505.1;Parent=gene-AD11_RS26270;Dbxref=GenBank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AD11_RS26270;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 68411 69061 . + . ID=gene-AD11_RS26275;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AD11_RS26275;old_locus_tag=AD11_4664 NZ_JJLL01000165.1 Protein Homology CDS 68411 69061 . + 0 ID=cds-WP_000056760.1;Parent=gene-AD11_RS26275;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AD11_RS26275;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 69071 69925 . + . ID=gene-AD11_RS26280;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AD11_RS26280;old_locus_tag=AD11_4665 NZ_JJLL01000165.1 Protein Homology CDS 69071 69925 . + 0 ID=cds-WP_000949492.1;Parent=gene-AD11_RS26280;Dbxref=GenBank:WP_000949492.1;Name=WP_000949492.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AD11_RS26280;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949492.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 69925 70611 . + . ID=gene-AD11_RS26285;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AD11_RS26285;old_locus_tag=AD11_4666 NZ_JJLL01000165.1 Protein Homology CDS 69925 70611 . + 0 ID=cds-WP_001170765.1;Parent=gene-AD11_RS26285;Dbxref=GenBank:WP_001170765.1;Name=WP_001170765.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313201.1;locus_tag=AD11_RS26285;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170765.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 70741 71016 . - . ID=gene-AD11_RS26290;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AD11_RS26290;old_locus_tag=AD11_4667 NZ_JJLL01000165.1 Protein Homology CDS 70741 71016 . - 0 ID=cds-WP_000492914.1;Parent=gene-AD11_RS26290;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AD11_RS26290;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 71343 71738 . + . ID=gene-AD11_RS26300;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AD11_RS26300;old_locus_tag=AD11_4668 NZ_JJLL01000165.1 Protein Homology CDS 71343 71738 . + 0 ID=cds-WP_001216676.1;Parent=gene-AD11_RS26300;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AD11_RS26300;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 71745 72059 . + . ID=gene-AD11_RS26305;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AD11_RS26305 NZ_JJLL01000165.1 Protein Homology CDS 71745 72059 . + 0 ID=cds-WP_001296681.1;Parent=gene-AD11_RS26305;Dbxref=GenBank:WP_001296681.1;Name=WP_001296681.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=AD11_RS26305;product=primosomal replication protein N;protein_id=WP_001296681.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 72064 72291 . + . ID=gene-AD11_RS26310;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AD11_RS26310;old_locus_tag=AD11_4669 NZ_JJLL01000165.1 Protein Homology CDS 72064 72291 . + 0 ID=cds-WP_000135199.1;Parent=gene-AD11_RS26310;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AD11_RS26310;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 72333 72782 . + . ID=gene-AD11_RS26315;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AD11_RS26315;old_locus_tag=AD11_4670 NZ_JJLL01000165.1 Protein Homology CDS 72333 72782 . + 0 ID=cds-WP_001196062.1;Parent=gene-AD11_RS26315;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AD11_RS26315;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 72894 73865 . - . ID=gene-AD11_RS26320;Name=AD11_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26320;old_locus_tag=AD11_4671 NZ_JJLL01000165.1 Protein Homology CDS 72894 73865 . - 0 ID=cds-WP_033866550.1;Parent=gene-AD11_RS26320;Dbxref=GenBank:WP_033866550.1;Name=WP_033866550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001422748.1;locus_tag=AD11_RS26320;product=TRAP transporter substrate-binding protein;protein_id=WP_033866550.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 73918 75219 . - . ID=gene-AD11_RS26325;Name=AD11_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26325;old_locus_tag=AD11_4672 NZ_JJLL01000165.1 Protein Homology CDS 73918 75219 . - 0 ID=cds-WP_000386846.1;Parent=gene-AD11_RS26325;Dbxref=GenBank:WP_000386846.1;Name=WP_000386846.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000386845.1;locus_tag=AD11_RS26325;product=TRAP transporter large permease;protein_id=WP_000386846.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 75262 75738 . - . ID=gene-AD11_RS26330;Name=AD11_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26330;old_locus_tag=AD11_4673 NZ_JJLL01000165.1 Protein Homology CDS 75262 75738 . - 0 ID=cds-WP_001548044.1;Parent=gene-AD11_RS26330;Dbxref=GenBank:WP_001548044.1;Name=WP_001548044.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012311688.1;locus_tag=AD11_RS26330;product=TRAP transporter small permease;protein_id=WP_001548044.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 75759 77840 . - . ID=gene-AD11_RS26335;Name=AD11_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26335;old_locus_tag=AD11_4674 NZ_JJLL01000165.1 Protein Homology CDS 75759 77840 . - 0 ID=cds-WP_000080324.1;Parent=gene-AD11_RS26335;Dbxref=GenBank:WP_000080324.1;Name=WP_000080324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005766390.1;locus_tag=AD11_RS26335;product=FAD-dependent oxidoreductase;protein_id=WP_000080324.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 77837 79378 . - . ID=gene-AD11_RS26340;Name=AD11_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26340;old_locus_tag=AD11_4675 NZ_JJLL01000165.1 Protein Homology CDS 77837 79378 . - 0 ID=cds-WP_001226956.1;Parent=gene-AD11_RS26340;Dbxref=GenBank:WP_001226956.1;Name=WP_001226956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=AD11_RS26340;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_001226956.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 79388 80164 . - . ID=gene-AD11_RS26345;Name=AD11_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26345;old_locus_tag=AD11_4676 NZ_JJLL01000165.1 Protein Homology CDS 79388 80164 . - 0 ID=cds-WP_001283547.1;Parent=gene-AD11_RS26345;Dbxref=GenBank:WP_001283547.1;Name=WP_001283547.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=AD11_RS26345;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_001283547.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 80174 81016 . - . ID=gene-AD11_RS26350;Name=AD11_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26350;old_locus_tag=AD11_4677 NZ_JJLL01000165.1 Protein Homology CDS 80174 81016 . - 0 ID=cds-WP_001205234.1;Parent=gene-AD11_RS26350;Dbxref=GenBank:WP_001205234.1;Name=WP_001205234.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=AD11_RS26350;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_001205234.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 81026 81817 . - . ID=gene-AD11_RS26355;Name=AD11_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26355;old_locus_tag=AD11_4678 NZ_JJLL01000165.1 Protein Homology CDS 81026 81817 . - 0 ID=cds-WP_000843390.1;Parent=gene-AD11_RS26355;Dbxref=GenBank:WP_000843390.1;Name=WP_000843390.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=AD11_RS26355;product=3-ketoacyl-ACP reductase;protein_id=WP_000843390.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 82030 82677 . + . ID=gene-AD11_RS26360;Name=AD11_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26360;old_locus_tag=AD11_4679 NZ_JJLL01000165.1 Protein Homology CDS 82030 82677 . + 0 ID=cds-WP_033865945.1;Parent=gene-AD11_RS26360;Dbxref=GenBank:WP_033865945.1;Name=WP_033865945.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AD11_RS26360;product=TetR/AcrR family transcriptional regulator;protein_id=WP_033865945.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 82661 83299 . - . ID=gene-AD11_RS26365;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AD11_RS26365;old_locus_tag=AD11_4680 NZ_JJLL01000165.1 Protein Homology CDS 82661 83299 . - 0 ID=cds-WP_001119458.1;Parent=gene-AD11_RS26365;Dbxref=GenBank:WP_001119458.1;Name=WP_001119458.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AD11_RS26365;product=cell division protein YtfB;protein_id=WP_001119458.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 83518 84138 . + . ID=gene-AD11_RS26370;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AD11_RS26370;old_locus_tag=AD11_4681 NZ_JJLL01000165.1 Protein Homology CDS 83518 84138 . + 0 ID=cds-WP_000211237.1;Parent=gene-AD11_RS26370;Dbxref=GenBank:WP_000211237.1;Name=WP_000211237.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AD11_RS26370;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211237.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 84447 85859 . + . ID=gene-AD11_RS26375;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AD11_RS26375;old_locus_tag=AD11_4682 NZ_JJLL01000165.1 Protein Homology CDS 84447 85859 . + 0 ID=cds-WP_000228346.1;Parent=gene-AD11_RS26375;Dbxref=GenBank:WP_000228346.1;Name=WP_000228346.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=AD11_RS26375;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228346.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 85904 86566 . - . ID=gene-AD11_RS26380;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AD11_RS26380;old_locus_tag=AD11_4683 NZ_JJLL01000165.1 Protein Homology CDS 85904 86566 . - 0 ID=cds-WP_000331456.1;Parent=gene-AD11_RS26380;Dbxref=GenBank:WP_000331456.1;Name=WP_000331456.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AD11_RS26380;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 86674 87639 . - . ID=gene-AD11_RS26385;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AD11_RS26385;old_locus_tag=AD11_4684 NZ_JJLL01000165.1 Protein Homology CDS 86674 87639 . - 0 ID=cds-WP_001296686.1;Parent=gene-AD11_RS26385;Dbxref=GenBank:WP_001296686.1;Name=WP_001296686.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=AD11_RS26385;product=DMT family transporter;protein_id=WP_001296686.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 87747 88607 . - . ID=gene-AD11_RS26390;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AD11_RS26390;old_locus_tag=AD11_4685 NZ_JJLL01000165.1 Protein Homology CDS 87747 88607 . - 0 ID=cds-WP_001548048.1;Parent=gene-AD11_RS26390;Dbxref=GenBank:WP_001548048.1;Name=WP_001548048.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313217.3;locus_tag=AD11_RS26390;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001548048.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 88696 89076 . + . ID=gene-AD11_RS26395;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AD11_RS26395;old_locus_tag=AD11_4686 NZ_JJLL01000165.1 Protein Homology CDS 88696 89076 . + 0 ID=cds-WP_000084622.1;Parent=gene-AD11_RS26395;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AD11_RS26395;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 89194 91137 . - . ID=gene-AD11_RS26400;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AD11_RS26400;old_locus_tag=AD11_4687 NZ_JJLL01000165.1 Protein Homology CDS 89194 91137 . - 0 ID=cds-WP_000589447.1;Parent=gene-AD11_RS26400;Dbxref=GenBank:WP_000589447.1;Name=WP_000589447.1;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313218.1;locus_tag=AD11_RS26400;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_000589447.1;transl_table=11 NZ_JJLL01000165.1 RefSeq gene 91208 92772 . - . ID=gene-AD11_RS26405;Name=tnpC;end_range=92772,.;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AD11_RS26405;old_locus_tag=AD11_4688;partial=true NZ_JJLL01000165.1 Protein Homology CDS 91208 92772 . - 2 ID=cds-WP_064735373.1-3;Parent=gene-AD11_RS26405;Dbxref=GenBank:WP_064735373.1;Name=WP_064735373.1;Ontology_term=GO:0004803;end_range=92772,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AD11_RS26405;partial=true;product=IS66 family transposase;protein_id=WP_064735373.1;transl_table=11 ##sequence-region NZ_JJLL01000166.1 1 71020 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000166.1 RefSeq region 1 71020 . + . ID=NZ_JJLL01000166.1:1..71020;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000166.1 RefSeq pseudogene 1 309 . - . ID=gene-AD11_RS26410;Name=AD11_RS26410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS26410;old_locus_tag=AD11_4689;partial=true;pseudo=true;start_range=.,1 NZ_JJLL01000166.1 Protein Homology CDS 1 309 . - 0 ID=cds-AD11_RS26410;Parent=gene-AD11_RS26410;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001690050.1;locus_tag=AD11_RS26410;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 552 1292 . + . ID=gene-AD11_RS26415;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AD11_RS26415;old_locus_tag=AD11_4690 NZ_JJLL01000166.1 Protein Homology CDS 552 1292 . + 0 ID=cds-WP_000886920.1;Parent=gene-AD11_RS26415;Dbxref=GenBank:WP_000886920.1;Name=WP_000886920.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AD11_RS26415;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886920.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 1282 1839 . - . ID=gene-AD11_RS26420;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AD11_RS26420;old_locus_tag=AD11_4691 NZ_JJLL01000166.1 Protein Homology CDS 1282 1839 . - 0 ID=cds-WP_000175289.1;Parent=gene-AD11_RS26420;Dbxref=GenBank:WP_000175289.1;Name=WP_000175289.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=AD11_RS26420;product=YtfJ family protein;protein_id=WP_000175289.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 2164 2370 . + . ID=gene-AD11_RS26425;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AD11_RS26425;old_locus_tag=AD11_4692 NZ_JJLL01000166.1 Protein Homology CDS 2164 2370 . + 0 ID=cds-WP_000689228.1;Parent=gene-AD11_RS26425;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AD11_RS26425;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 2432 3775 . - . ID=gene-AD11_RS26430;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AD11_RS26430;old_locus_tag=AD11_4693 NZ_JJLL01000166.1 Protein Homology CDS 2432 3775 . - 0 ID=cds-WP_000935042.1;Parent=gene-AD11_RS26430;Dbxref=GenBank:WP_000935042.1;Name=WP_000935042.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709980.1;locus_tag=AD11_RS26430;product=hemolysin family protein;protein_id=WP_000935042.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 4098 4736 . - . ID=gene-AD11_RS26435;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AD11_RS26435;old_locus_tag=AD11_4694 NZ_JJLL01000166.1 Protein Homology CDS 4098 4736 . - 0 ID=cds-WP_001295196.1;Parent=gene-AD11_RS26435;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AD11_RS26435;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 4942 6675 . + . ID=gene-AD11_RS26445;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AD11_RS26445;old_locus_tag=AD11_4696 NZ_JJLL01000166.1 Protein Homology CDS 4942 6675 . + 0 ID=cds-WP_001269327.1;Parent=gene-AD11_RS26445;Dbxref=GenBank:WP_001269327.1;Name=WP_001269327.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AD11_RS26445;product=autotransporter assembly complex protein TamA;protein_id=WP_001269327.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 6672 10451 . + . ID=gene-AD11_RS26450;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AD11_RS26450;old_locus_tag=AD11_4697 NZ_JJLL01000166.1 Protein Homology CDS 6672 10451 . + 0 ID=cds-WP_000060891.1;Parent=gene-AD11_RS26450;Dbxref=GenBank:WP_000060891.1;Name=WP_000060891.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418642.1;locus_tag=AD11_RS26450;product=autotransporter assembly complex protein TamB;protein_id=WP_000060891.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 10454 10795 . + . ID=gene-AD11_RS26455;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AD11_RS26455;old_locus_tag=AD11_4698 NZ_JJLL01000166.1 Protein Homology CDS 10454 10795 . + 0 ID=cds-WP_001219160.1;Parent=gene-AD11_RS26455;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AD11_RS26455;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 11007 11258 . + . ID=gene-AD11_RS26460;Name=chpS;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;locus_tag=AD11_RS26460;old_locus_tag=AD11_4699 NZ_JJLL01000166.1 Protein Homology CDS 11007 11258 . + 0 ID=cds-WP_001223208.1;Parent=gene-AD11_RS26460;Dbxref=GenBank:WP_001223208.1;Name=WP_001223208.1;gbkey=CDS;gene=chpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418645.2;locus_tag=AD11_RS26460;product=type II toxin-antitoxin system antitoxin ChpS;protein_id=WP_001223208.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 11252 11602 . + . ID=gene-AD11_RS26465;Name=chpB;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;locus_tag=AD11_RS26465;old_locus_tag=AD11_4700 NZ_JJLL01000166.1 Protein Homology CDS 11252 11602 . + 0 ID=cds-WP_000239579.1;Parent=gene-AD11_RS26465;Dbxref=GenBank:WP_000239579.1;Name=WP_000239579.1;gbkey=CDS;gene=chpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418646.1;locus_tag=AD11_RS26465;product=endoribonuclease toxin ChpB;protein_id=WP_000239579.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 11679 12209 . - . ID=gene-AD11_RS26470;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AD11_RS26470;old_locus_tag=AD11_4701 NZ_JJLL01000166.1 Protein Homology CDS 11679 12209 . - 0 ID=cds-WP_000055072.1;Parent=gene-AD11_RS26470;Dbxref=GenBank:WP_000055072.1;Name=WP_000055072.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AD11_RS26470;product=inorganic diphosphatase;protein_id=WP_000055072.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 12519 13475 . + . ID=gene-AD11_RS26475;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AD11_RS26475;old_locus_tag=AD11_4702 NZ_JJLL01000166.1 Protein Homology CDS 12519 13475 . + 0 ID=cds-WP_000265942.1;Parent=gene-AD11_RS26475;Dbxref=GenBank:WP_000265942.1;Name=WP_000265942.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=AD11_RS26475;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265942.1;transl_table=11 NZ_JJLL01000166.1 RefSeq pseudogene 13552 15058 . + . ID=gene-AD11_RS26480;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=pseudogene;locus_tag=AD11_RS26480;pseudo=true NZ_JJLL01000166.1 Protein Homology CDS 13552 15058 . + 0 ID=cds-AD11_RS26480;Parent=gene-AD11_RS26480;Note=frameshifted;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AD11_RS26480;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;pseudo=true;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 15072 16094 . + . ID=gene-AD11_RS26485;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AD11_RS26485;old_locus_tag=AD11_4705 NZ_JJLL01000166.1 Protein Homology CDS 15072 16094 . + 0 ID=cds-WP_001295197.1;Parent=gene-AD11_RS26485;Dbxref=GenBank:WP_001295197.1;Name=WP_001295197.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AD11_RS26485;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_001295197.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 16081 17076 . + . ID=gene-AD11_RS26490;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AD11_RS26490;old_locus_tag=AD11_4706 NZ_JJLL01000166.1 Protein Homology CDS 16081 17076 . + 0 ID=cds-WP_000596008.1;Parent=gene-AD11_RS26490;Dbxref=GenBank:WP_000596008.1;Name=WP_000596008.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313235.2;locus_tag=AD11_RS26490;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000596008.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 17109 18107 . - . ID=gene-AD11_RS26495;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AD11_RS26495;old_locus_tag=AD11_4707 NZ_JJLL01000166.1 Protein Homology CDS 17109 18107 . - 0 ID=cds-WP_000853753.1;Parent=gene-AD11_RS26495;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AD11_RS26495;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 18283 19656 . + . ID=gene-AD11_RS26500;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AD11_RS26500;old_locus_tag=AD11_4709 NZ_JJLL01000166.1 Protein Homology CDS 18283 19656 . + 0 ID=cds-WP_001219789.1;Parent=gene-AD11_RS26500;Dbxref=GenBank:WP_001219789.1;Name=WP_001219789.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=AD11_RS26500;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219789.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 19739 20290 . - . ID=gene-AD11_RS26505;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AD11_RS26505;old_locus_tag=AD11_4710 NZ_JJLL01000166.1 Protein Homology CDS 19739 20290 . - 0 ID=cds-WP_000166270.1;Parent=gene-AD11_RS26505;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AD11_RS26505;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 20384 21736 . + . ID=gene-AD11_RS26510;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AD11_RS26510;old_locus_tag=AD11_4711 NZ_JJLL01000166.1 Protein Homology CDS 20384 21736 . + 0 ID=cds-WP_001162171.1;Parent=gene-AD11_RS26510;Dbxref=GenBank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AD11_RS26510;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 21919 22305 . + . ID=gene-AD11_RS26515;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AD11_RS26515;old_locus_tag=AD11_4712 NZ_JJLL01000166.1 Protein Homology CDS 21919 22305 . + 0 ID=cds-WP_001232251.1;Parent=gene-AD11_RS26515;Dbxref=GenBank:WP_001232251.1;Name=WP_001232251.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AD11_RS26515;product=cytochrome b562;protein_id=WP_001232251.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 22350 22814 . - . ID=gene-AD11_RS26520;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AD11_RS26520;old_locus_tag=AD11_4713 NZ_JJLL01000166.1 Protein Homology CDS 22350 22814 . - 0 ID=cds-WP_001106223.1;Parent=gene-AD11_RS26520;Dbxref=GenBank:WP_001106223.1;Name=WP_001106223.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709964.1;locus_tag=AD11_RS26520;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106223.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 22972 25110 . - . ID=gene-AD11_RS26525;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AD11_RS26525;old_locus_tag=AD11_4714 NZ_JJLL01000166.1 Protein Homology CDS 22972 25110 . - 0 ID=cds-WP_000187776.1;Parent=gene-AD11_RS26525;Dbxref=GenBank:WP_000187776.1;Name=WP_000187776.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AD11_RS26525;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187776.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 25504 27159 . - . ID=gene-AD11_RS26530;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AD11_RS26530;old_locus_tag=AD11_4716 NZ_JJLL01000166.1 Protein Homology CDS 25504 27159 . - 0 ID=cds-WP_001348238.1;Parent=gene-AD11_RS26530;Dbxref=GenBank:WP_001348238.1;Name=WP_001348238.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709962.2;locus_tag=AD11_RS26530;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_001348238.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 27209 28630 . - . ID=gene-AD11_RS26535;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AD11_RS26535;old_locus_tag=AD11_4717 NZ_JJLL01000166.1 Protein Homology CDS 27209 28630 . - 0 ID=cds-WP_001299664.1;Parent=gene-AD11_RS26535;Dbxref=GenBank:WP_001299664.1;Name=WP_001299664.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AD11_RS26535;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 28749 29696 . - . ID=gene-AD11_RS26540;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AD11_RS26540;old_locus_tag=AD11_4718 NZ_JJLL01000166.1 Protein Homology CDS 28749 29696 . - 0 ID=cds-WP_001181324.1;Parent=gene-AD11_RS26540;Dbxref=GenBank:WP_001181324.1;Name=WP_001181324.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AD11_RS26540;product=trehalose operon repressor TreR;protein_id=WP_001181324.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 29881 29934 . + . ID=gene-AD11_RS31825;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AD11_RS31825 NZ_JJLL01000166.1 Protein Homology CDS 29881 29934 . + 0 ID=cds-WP_001387276.1;Parent=gene-AD11_RS31825;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AD11_RS31825;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 30075 32771 . + . ID=gene-AD11_RS26545;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AD11_RS26545;old_locus_tag=AD11_4719 NZ_JJLL01000166.1 Protein Homology CDS 30075 32771 . + 0 ID=cds-WP_000471872.1;Parent=gene-AD11_RS26545;Dbxref=GenBank:WP_000471872.1;Name=WP_000471872.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AD11_RS26545;product=magnesium-translocating P-type ATPase;protein_id=WP_000471872.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 32977 33363 . - . ID=gene-AD11_RS26550;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AD11_RS26550;old_locus_tag=AD11_4720 NZ_JJLL01000166.1 Protein Homology CDS 32977 33363 . - 0 ID=cds-WP_000047539.1;Parent=gene-AD11_RS26550;Dbxref=GenBank:WP_000047539.1;Name=WP_000047539.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AD11_RS26550;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047539.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 33436 33897 . - . ID=gene-AD11_RS26555;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AD11_RS26555;old_locus_tag=AD11_4721 NZ_JJLL01000166.1 Protein Homology CDS 33436 33897 . - 0 ID=cds-WP_000148581.1;Parent=gene-AD11_RS26555;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AD11_RS26555;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 33910 34845 . - . ID=gene-AD11_RS26560;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AD11_RS26560;old_locus_tag=AD11_4722 NZ_JJLL01000166.1 Protein Homology CDS 33910 34845 . - 0 ID=cds-WP_000013047.1;Parent=gene-AD11_RS26560;Dbxref=GenBank:WP_000013047.1;Name=WP_000013047.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AD11_RS26560;product=aspartate carbamoyltransferase;protein_id=WP_000013047.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 34849 34983 . - . ID=gene-AD11_RS26565;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AD11_RS26565 NZ_JJLL01000166.1 Protein Homology CDS 34849 34983 . - 0 ID=cds-WP_001296693.1;Parent=gene-AD11_RS26565;Dbxref=GenBank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AD11_RS26565;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_JJLL01000166.1 RefSeq pseudogene 35264 35658 . - . ID=gene-AD11_RS26575;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=pseudogene;locus_tag=AD11_RS26575;old_locus_tag=AD11_4724;pseudo=true NZ_JJLL01000166.1 Protein Homology CDS 35264 35658 . - 0 ID=cds-AD11_RS26575;Parent=gene-AD11_RS26575;Note=frameshifted;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418669.1;locus_tag=AD11_RS26575;product=RidA family protein;pseudo=true;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 35789 36502 . - . ID=gene-AD11_RS26580;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AD11_RS26580;old_locus_tag=AD11_4725 NZ_JJLL01000166.1 Protein Homology CDS 35789 36502 . - 0 ID=cds-WP_000500739.1;Parent=gene-AD11_RS26580;Dbxref=GenBank:WP_000500739.1;Name=WP_000500739.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313253.1;locus_tag=AD11_RS26580;product=SDR family oxidoreductase;protein_id=WP_000500739.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 36573 37166 . + . ID=gene-AD11_RS26585;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AD11_RS26585;old_locus_tag=AD11_4726 NZ_JJLL01000166.1 Protein Homology CDS 36573 37166 . + 0 ID=cds-WP_000256664.1;Parent=gene-AD11_RS26585;Dbxref=GenBank:WP_000256664.1;Name=WP_000256664.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313255.2;locus_tag=AD11_RS26585;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256664.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 37311 37763 . + . ID=gene-AD11_RS26590;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AD11_RS26590;old_locus_tag=AD11_4728 NZ_JJLL01000166.1 Protein Homology CDS 37311 37763 . + 0 ID=cds-WP_001336307.1;Parent=gene-AD11_RS26590;Dbxref=GenBank:WP_001336307.1;Name=WP_001336307.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AD11_RS26590;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_001336307.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 37886 39481 . + . ID=gene-AD11_RS26595;Name=AD11_RS26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26595;old_locus_tag=AD11_4729 NZ_JJLL01000166.1 Protein Homology CDS 37886 39481 . + 0 ID=cds-WP_000036437.1;Parent=gene-AD11_RS26595;Dbxref=GenBank:WP_000036437.1;Name=WP_000036437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600920.1;locus_tag=AD11_RS26595;product=hypothetical protein;protein_id=WP_000036437.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 39538 40542 . - . ID=gene-AD11_RS26600;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AD11_RS26600;old_locus_tag=AD11_4730 NZ_JJLL01000166.1 Protein Homology CDS 39538 40542 . - 0 ID=cds-WP_000012904.1;Parent=gene-AD11_RS26600;Dbxref=GenBank:WP_000012904.1;Name=WP_000012904.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=AD11_RS26600;product=ornithine carbamoyltransferase;protein_id=WP_000012904.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 40704 41120 . + . ID=gene-AD11_RS26605;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AD11_RS26605;old_locus_tag=AD11_4731 NZ_JJLL01000166.1 Protein Homology CDS 40704 41120 . + 0 ID=cds-WP_000002953.1;Parent=gene-AD11_RS26605;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AD11_RS26605;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 41166 41669 . - . ID=gene-AD11_RS26610;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AD11_RS26610;old_locus_tag=AD11_4732 NZ_JJLL01000166.1 Protein Homology CDS 41166 41669 . - 0 ID=cds-WP_001059398.1;Parent=gene-AD11_RS26610;Dbxref=GenBank:WP_001059398.1;Name=WP_001059398.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=AD11_RS26610;product=GNAT family N-acetyltransferase;protein_id=WP_001059398.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 41862 43058 . + . ID=gene-AD11_RS26615;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=AD11_RS26615;old_locus_tag=AD11_4733 NZ_JJLL01000166.1 Protein Homology CDS 41862 43058 . + 0 ID=cds-WP_000079660.1;Parent=gene-AD11_RS26615;Dbxref=GenBank:WP_000079660.1;Name=WP_000079660.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709944.2;locus_tag=AD11_RS26615;product=YjgN family protein;protein_id=WP_000079660.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 43112 45967 . - . ID=gene-AD11_RS26620;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AD11_RS26620;old_locus_tag=AD11_4734 NZ_JJLL01000166.1 Protein Homology CDS 43112 45967 . - 0 ID=cds-WP_000416392.1;Parent=gene-AD11_RS26620;Dbxref=GenBank:WP_000416392.1;Name=WP_000416392.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AD11_RS26620;product=valine--tRNA ligase;protein_id=WP_000416392.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 45967 46410 . - . ID=gene-AD11_RS26625;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AD11_RS26625;old_locus_tag=AD11_4735 NZ_JJLL01000166.1 Protein Homology CDS 45967 46410 . - 0 ID=cds-WP_000786399.1;Parent=gene-AD11_RS26625;Dbxref=GenBank:WP_000786399.1;Name=WP_000786399.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AD11_RS26625;product=DNA polymerase III subunit chi;protein_id=WP_000786399.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 46668 48179 . - . ID=gene-AD11_RS26630;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AD11_RS26630;old_locus_tag=AD11_4736 NZ_JJLL01000166.1 Protein Homology CDS 46668 48179 . - 0 ID=cds-WP_000397144.1;Parent=gene-AD11_RS26630;Dbxref=GenBank:WP_000397144.1;Name=WP_000397144.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AD11_RS26630;product=leucyl aminopeptidase;protein_id=WP_000397144.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 48333 48383 . + . ID=gene-AD11_RS32790;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=AD11_RS32790 NZ_JJLL01000166.1 Protein Homology CDS 48333 48383 . + 0 ID=cds-WP_211180521.1;Parent=gene-AD11_RS32790;Dbxref=GenBank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AD11_RS32790;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 48446 49546 . + . ID=gene-AD11_RS26635;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AD11_RS26635;old_locus_tag=AD11_4738 NZ_JJLL01000166.1 Protein Homology CDS 48446 49546 . + 0 ID=cds-WP_000584114.1;Parent=gene-AD11_RS26635;Dbxref=GenBank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AD11_RS26635;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 49546 50628 . + . ID=gene-AD11_RS26640;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AD11_RS26640;old_locus_tag=AD11_4739 NZ_JJLL01000166.1 Protein Homology CDS 49546 50628 . + 0 ID=cds-WP_001295681.1;Parent=gene-AD11_RS26640;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AD11_RS26640;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 50789 52291 . - . ID=gene-AD11_RS26645;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AD11_RS26645;old_locus_tag=AD11_4740 NZ_JJLL01000166.1 Protein Homology CDS 50789 52291 . - 0 ID=cds-WP_001294572.1;Parent=gene-AD11_RS26645;Dbxref=GenBank:WP_001294572.1;Name=WP_001294572.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418684.1;locus_tag=AD11_RS26645;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_001294572.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 52369 53367 . - . ID=gene-AD11_RS26650;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=AD11_RS26650;old_locus_tag=AD11_4741 NZ_JJLL01000166.1 Protein Homology CDS 52369 53367 . - 0 ID=cds-WP_001309159.1;Parent=gene-AD11_RS26650;Dbxref=GenBank:WP_001309159.1;Name=WP_001309159.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418685.1;locus_tag=AD11_RS26650;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001309159.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 53434 54753 . - . ID=gene-AD11_RS26655;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=AD11_RS26655;old_locus_tag=AD11_4742 NZ_JJLL01000166.1 Protein Homology CDS 53434 54753 . - 0 ID=cds-WP_001128335.1;Parent=gene-AD11_RS26655;Dbxref=GenBank:WP_001128335.1;Name=WP_001128335.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418686.1;locus_tag=AD11_RS26655;product=gnt-II system L-idonate transporter;protein_id=WP_001128335.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 54816 55580 . - . ID=gene-AD11_RS26660;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AD11_RS26660;old_locus_tag=AD11_4743 NZ_JJLL01000166.1 Protein Homology CDS 54816 55580 . - 0 ID=cds-WP_000998695.1;Parent=gene-AD11_RS26660;Dbxref=GenBank:WP_000998695.1;Name=WP_000998695.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AD11_RS26660;product=gluconate 5-dehydrogenase;protein_id=WP_000998695.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 55604 56635 . - . ID=gene-AD11_RS26665;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=AD11_RS26665;old_locus_tag=AD11_4744 NZ_JJLL01000166.1 Protein Homology CDS 55604 56635 . - 0 ID=cds-WP_001197411.1;Parent=gene-AD11_RS26665;Dbxref=GenBank:WP_001197411.1;Name=WP_001197411.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418688.1;locus_tag=AD11_RS26665;product=L-idonate 5-dehydrogenase;protein_id=WP_001197411.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 56852 57415 . + . ID=gene-AD11_RS26670;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=AD11_RS26670;old_locus_tag=AD11_4745 NZ_JJLL01000166.1 Protein Homology CDS 56852 57415 . + 0 ID=cds-WP_000896738.1;Parent=gene-AD11_RS26670;Dbxref=GenBank:WP_000896738.1;Name=WP_000896738.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418689.1;locus_tag=AD11_RS26670;product=gluconokinase;protein_id=WP_000896738.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 57419 58438 . - . ID=gene-AD11_RS26675;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AD11_RS26675;old_locus_tag=AD11_4746 NZ_JJLL01000166.1 Protein Homology CDS 57419 58438 . - 0 ID=cds-WP_001318460.1;Parent=gene-AD11_RS26675;Dbxref=GenBank:WP_001318460.1;Name=WP_001318460.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AD11_RS26675;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_001318460.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 58634 58718 . + . ID=gene-AD11_RS26680;Name=AD11_RS26680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS26680;old_locus_tag=AD11_4748 NZ_JJLL01000166.1 tRNAscan-SE tRNA 58634 58718 . + . ID=rna-AD11_RS26680;Parent=gene-AD11_RS26680;anticodon=(pos:58668..58670);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26680;product=tRNA-Leu NZ_JJLL01000166.1 tRNAscan-SE exon 58634 58718 . + . ID=exon-AD11_RS26680-1;Parent=rna-AD11_RS26680;anticodon=(pos:58668..58670);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS26680;product=tRNA-Leu NZ_JJLL01000166.1 RefSeq gene 58961 60169 . + . ID=gene-AD11_RS26685;Name=AD11_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26685;old_locus_tag=AD11_4749 NZ_JJLL01000166.1 Protein Homology CDS 58961 60169 . + 0 ID=cds-WP_223362169.1;Parent=gene-AD11_RS26685;Dbxref=GenBank:WP_223362169.1;Name=WP_223362169.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001642584.1;locus_tag=AD11_RS26685;product=tyrosine-type recombinase/integrase;protein_id=WP_223362169.1;transl_table=11 NZ_JJLL01000166.1 RefSeq pseudogene 60486 61669 . - . ID=gene-AD11_RS27515;Name=AD11_RS27515;end_range=61669,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS27515;partial=true;pseudo=true NZ_JJLL01000166.1 Protein Homology CDS 60486 61669 . - 0 ID=cds-AD11_RS27515;Parent=gene-AD11_RS27515;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009244,GO:1900727,GO:0016776;end_range=61669,.;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535067.1;locus_tag=AD11_RS27515;partial=true;product=phosphoethanolamine transferase;pseudo=true;transl_table=11 NZ_JJLL01000166.1 RefSeq pseudogene 62253 62482 . + . ID=gene-AD11_RS30235;Name=AD11_RS30235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS30235;partial=true;pseudo=true;start_range=.,62253 NZ_JJLL01000166.1 Protein Homology CDS 62253 62482 . + 0 ID=cds-AD11_RS30235;Parent=gene-AD11_RS30235;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354984.1;locus_tag=AD11_RS30235;partial=true;product=transposase domain-containing protein;pseudo=true;start_range=.,62253;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 62996 64342 . - . ID=gene-AD11_RS26715;Name=insG;gbkey=Gene;gene=insG;gene_biotype=protein_coding;locus_tag=AD11_RS26715;old_locus_tag=AD11_4754 NZ_JJLL01000166.1 Protein Homology CDS 62996 64342 . - 0 ID=cds-WP_000483765.1;Parent=gene-AD11_RS26715;Dbxref=GenBank:WP_000483765.1;Name=WP_000483765.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=insG;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707145.1;locus_tag=AD11_RS26715;product=IS4-like element IS4 family transposase;protein_id=WP_000483765.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 64951 66168 . + . ID=gene-AD11_RS26720;Name=nanX;gbkey=Gene;gene=nanX;gene_biotype=protein_coding;locus_tag=AD11_RS26720;old_locus_tag=AD11_4755 NZ_JJLL01000166.1 Protein Homology CDS 64951 66168 . + 0 ID=cds-WP_033865954.1;Parent=gene-AD11_RS26720;Dbxref=GenBank:WP_033865954.1;Name=WP_033865954.1;gbkey=CDS;gene=nanX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418699.4;locus_tag=AD11_RS26720;product=MFS transporter;protein_id=WP_033865954.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 66180 67298 . + . ID=gene-AD11_RS26725;Name=nanY;gbkey=Gene;gene=nanY;gene_biotype=protein_coding;gene_synonym=yjhC;locus_tag=AD11_RS26725;old_locus_tag=AD11_4756 NZ_JJLL01000166.1 Protein Homology CDS 66180 67298 . + 0 ID=cds-WP_000611568.1;Parent=gene-AD11_RS26725;Dbxref=GenBank:WP_000611568.1;Name=WP_000611568.1;gbkey=CDS;gene=nanY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418700.2;locus_tag=AD11_RS26725;product=2%2C7-anhydro-N-acetylneuraminate hydratase;protein_id=WP_000611568.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 67341 67466 . + . ID=gene-AD11_RS31085;Name=ythA;gbkey=Gene;gene=ythA;gene_biotype=protein_coding;locus_tag=AD11_RS31085 NZ_JJLL01000166.1 Protein Homology CDS 67341 67466 . + 0 ID=cds-WP_000594405.1;Parent=gene-AD11_RS31085;Dbxref=GenBank:WP_000594405.1;Name=WP_000594405.1;gbkey=CDS;gene=ythA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491548.1;locus_tag=AD11_RS31085;product=protein YthA;protein_id=WP_000594405.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 67519 67776 . - . ID=gene-AD11_RS26730;Name=AD11_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26730;old_locus_tag=AD11_4757 NZ_JJLL01000166.1 Protein Homology CDS 67519 67776 . - 0 ID=cds-WP_000254999.1;Parent=gene-AD11_RS26730;Dbxref=GenBank:WP_000254999.1;Name=WP_000254999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028057.6;locus_tag=AD11_RS26730;product=surface-adhesin E family protein;protein_id=WP_000254999.1;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 67799 68002 . + . ID=gene-AD11_RS31835;Name=AD11_RS31835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS31835;old_locus_tag=AD11_4758 NZ_JJLL01000166.1 Protein Homology CDS 67799 68002 . + 0 ID=cds-WP_000355616.1;Parent=gene-AD11_RS31835;Dbxref=GenBank:WP_000355616.1;Name=WP_000355616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023128.6;locus_tag=AD11_RS31835;product=MFS transporter;protein_id=WP_000355616.1;transl_table=11 NZ_JJLL01000166.1 RefSeq pseudogene 68090 68777 . + . ID=gene-AD11_RS31090;Name=AD11_RS31090;end_range=68777,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS31090;partial=true;pseudo=true NZ_JJLL01000166.1 Protein Homology CDS 68090 68777 . + 0 ID=cds-AD11_RS31090;Parent=gene-AD11_RS31090;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=68777,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AD11_RS31090;partial=true;product=IS3-like element IS911 family transposase;pseudo=true;transl_table=11 NZ_JJLL01000166.1 RefSeq gene 69450 70958 . + . ID=gene-AD11_RS26755;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AD11_RS26755;old_locus_tag=AD11_4761 NZ_JJLL01000166.1 Protein Homology CDS 69450 70958 . + 0 ID=cds-WP_001189111.1-5;Parent=gene-AD11_RS26755;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AD11_RS26755;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 ##sequence-region NZ_JJLL01000167.1 1 106427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000167.1 RefSeq region 1 106427 . + . ID=NZ_JJLL01000167.1:1..106427;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000167.1 RefSeq pseudogene 28 724 . + . ID=gene-AD11_RS26765;Name=AD11_RS26765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS26765;old_locus_tag=AD11_4762;pseudo=true NZ_JJLL01000167.1 Protein Homology CDS 28 724 . + 0 ID=cds-AD11_RS26765;Parent=gene-AD11_RS26765;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AD11_RS26765;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 NZ_JJLL01000167.1 RefSeq pseudogene 741 1022 . + . ID=gene-AD11_RS26770;Name=AD11_RS26770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS26770;old_locus_tag=AD11_4763;partial=true;pseudo=true;start_range=.,741 NZ_JJLL01000167.1 Protein Homology CDS 741 1022 . + 0 ID=cds-AD11_RS26770;Parent=gene-AD11_RS26770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313303.1;locus_tag=AD11_RS26770;partial=true;product=FimD/PapC C-terminal domain-containing protein;pseudo=true;start_range=.,741;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 1032 1562 . + . ID=gene-AD11_RS26775;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AD11_RS26775;old_locus_tag=AD11_4764 NZ_JJLL01000167.1 Protein Homology CDS 1032 1562 . + 0 ID=cds-WP_033865958.1;Parent=gene-AD11_RS26775;Dbxref=GenBank:WP_033865958.1;Name=WP_033865958.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313304.1;locus_tag=AD11_RS26775;product=type 1 fimbria minor subunit FimF;protein_id=WP_033865958.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 1635 2078 . + . ID=gene-AD11_RS26780;Name=AD11_RS26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26780;old_locus_tag=AD11_4765 NZ_JJLL01000167.1 Protein Homology CDS 1635 2078 . + 0 ID=cds-WP_306234496.1;Parent=gene-AD11_RS26780;Dbxref=GenBank:WP_306234496.1;Name=WP_306234496.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AD11_RS26780;product=fimbrial protein;protein_id=WP_306234496.1;transl_table=11 NZ_JJLL01000167.1 RefSeq pseudogene 2098 3001 . + . ID=gene-AD11_RS26785;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=pseudogene;locus_tag=AD11_RS26785;pseudo=true NZ_JJLL01000167.1 Protein Homology CDS 2098 3001 . + 0 ID=cds-AD11_RS26785;Parent=gene-AD11_RS26785;Note=frameshifted;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=AD11_RS26785;product=type 1 fimbria D-mannose specific adhesin FimH;pseudo=true;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 3174 4517 . - . ID=gene-AD11_RS26790;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AD11_RS26790;old_locus_tag=AD11_4768 NZ_JJLL01000167.1 Protein Homology CDS 3174 4517 . - 0 ID=cds-WP_000558251.1;Parent=gene-AD11_RS26790;Dbxref=GenBank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AD11_RS26790;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 4857 6041 . + . ID=gene-AD11_RS26800;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AD11_RS26800;old_locus_tag=AD11_4770 NZ_JJLL01000167.1 Protein Homology CDS 4857 6041 . + 0 ID=cds-WP_000438582.1;Parent=gene-AD11_RS26800;Dbxref=GenBank:WP_000438582.1;Name=WP_000438582.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AD11_RS26800;product=mannonate dehydratase;protein_id=WP_000438582.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 6122 7582 . + . ID=gene-AD11_RS26805;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AD11_RS26805;old_locus_tag=AD11_4771 NZ_JJLL01000167.1 Protein Homology CDS 6122 7582 . + 0 ID=cds-WP_000208194.1;Parent=gene-AD11_RS26805;Dbxref=GenBank:WP_000208194.1;Name=WP_000208194.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AD11_RS26805;product=fructuronate reductase;protein_id=WP_000208194.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 7797 8570 . + . ID=gene-AD11_RS26815;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AD11_RS26815;old_locus_tag=AD11_4772 NZ_JJLL01000167.1 Protein Homology CDS 7797 8570 . + 0 ID=cds-WP_000833691.1;Parent=gene-AD11_RS26815;Dbxref=GenBank:WP_000833691.1;Name=WP_000833691.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833692.1;locus_tag=AD11_RS26815;product=Uxu operon transcriptional regulator;protein_id=WP_000833691.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 8711 9541 . - . ID=gene-AD11_RS26820;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AD11_RS26820;old_locus_tag=AD11_4773 NZ_JJLL01000167.1 Protein Homology CDS 8711 9541 . - 0 ID=cds-WP_000062589.1;Parent=gene-AD11_RS26820;Dbxref=GenBank:WP_000062589.1;Name=WP_000062589.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=AD11_RS26820;product=DUF2686 family protein;protein_id=WP_000062589.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 9828 9896 . + . ID=gene-AD11_RS33240;Name=AD11_RS33240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS33240 NZ_JJLL01000167.1 Protein Homology CDS 9828 9896 . + 0 ID=cds-WP_418267939.1;Parent=gene-AD11_RS33240;Dbxref=GenBank:WP_418267939.1;Name=WP_418267939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AD11_RS33240;product=hypothetical protein;protein_id=WP_418267939.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 9875 10018 . + . ID=gene-AD11_RS32970;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=AD11_RS32970;old_locus_tag=AD11_4774 NZ_JJLL01000167.1 Protein Homology CDS 9875 10018 . + 0 ID=cds-WP_001297228.1;Parent=gene-AD11_RS32970;Dbxref=GenBank:WP_001297228.1;Name=WP_001297228.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AD11_RS32970;product=protein YtiD;protein_id=WP_001297228.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 10134 10217 . + . ID=gene-AD11_RS31840;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AD11_RS31840 NZ_JJLL01000167.1 Protein Homology CDS 10134 10217 . + 0 ID=cds-WP_120795393.1;Parent=gene-AD11_RS31840;Dbxref=GenBank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AD11_RS31840;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 10214 10606 . + . ID=gene-AD11_RS26835;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AD11_RS26835;old_locus_tag=AD11_4776 NZ_JJLL01000167.1 Protein Homology CDS 10214 10606 . + 0 ID=cds-WP_001297236.1;Parent=gene-AD11_RS26835;Dbxref=GenBank:WP_001297236.1;Name=WP_001297236.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418746.4;locus_tag=AD11_RS26835;product=anti-adapter protein IraD;protein_id=WP_001297236.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 10599 11510 . - . ID=gene-AD11_RS26840;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AD11_RS26840;old_locus_tag=AD11_4777 NZ_JJLL01000167.1 Protein Homology CDS 10599 11510 . - 0 ID=cds-WP_000340754.1;Parent=gene-AD11_RS26840;Dbxref=GenBank:WP_000340754.1;Name=WP_000340754.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AD11_RS26840;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340754.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 11575 12747 . - . ID=gene-AD11_RS26845;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AD11_RS26845;old_locus_tag=AD11_4778 NZ_JJLL01000167.1 Protein Homology CDS 11575 12747 . - 0 ID=cds-WP_000568416.1;Parent=gene-AD11_RS26845;Dbxref=GenBank:WP_000568416.1;Name=WP_000568416.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AD11_RS26845;product=beta-aspartyl-peptidase;protein_id=WP_000568416.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 12760 13221 . - . ID=gene-AD11_RS26850;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AD11_RS26850;old_locus_tag=AD11_4779 NZ_JJLL01000167.1 Protein Homology CDS 12760 13221 . - 0 ID=cds-WP_000211971.1;Parent=gene-AD11_RS26850;Dbxref=GenBank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AD11_RS26850;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 13218 13901 . - . ID=gene-AD11_RS26855;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AD11_RS26855;old_locus_tag=AD11_4780 NZ_JJLL01000167.1 Protein Homology CDS 13218 13901 . - 0 ID=cds-WP_001295597.1;Parent=gene-AD11_RS26855;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AD11_RS26855;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 14151 14705 . + . ID=gene-AD11_RS26860;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AD11_RS26860;old_locus_tag=AD11_4781 NZ_JJLL01000167.1 Protein Homology CDS 14151 14705 . + 0 ID=cds-WP_001151855.1;Parent=gene-AD11_RS26860;Dbxref=GenBank:WP_001151855.1;Name=WP_001151855.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AD11_RS26860;product=RNA 2'-phosphotransferase;protein_id=WP_001151855.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 14718 15896 . - . ID=gene-AD11_RS26865;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AD11_RS26865;old_locus_tag=AD11_4782 NZ_JJLL01000167.1 Protein Homology CDS 14718 15896 . - 0 ID=cds-WP_001141195.1;Parent=gene-AD11_RS26865;Dbxref=GenBank:WP_001141195.1;Name=WP_001141195.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AD11_RS26865;product=MFS transporter;protein_id=WP_001141195.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 15964 16824 . - . ID=gene-AD11_RS26870;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AD11_RS26870;old_locus_tag=AD11_4783 NZ_JJLL01000167.1 Protein Homology CDS 15964 16824 . - 0 ID=cds-WP_033865960.1;Parent=gene-AD11_RS26870;Dbxref=GenBank:WP_033865960.1;Name=WP_033865960.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AD11_RS26870;product=SdiA-regulated domain-containing protein;protein_id=WP_033865960.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 16889 17146 . - . ID=gene-AD11_RS26875;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AD11_RS26875;old_locus_tag=AD11_4784 NZ_JJLL01000167.1 Protein Homology CDS 16889 17146 . - 0 ID=cds-WP_000657675.1;Parent=gene-AD11_RS26875;Dbxref=GenBank:WP_000657675.1;Name=WP_000657675.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AD11_RS26875;product=DUF3343 domain-containing protein;protein_id=WP_000657675.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 17143 17910 . - . ID=gene-AD11_RS26880;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AD11_RS26880;old_locus_tag=AD11_4785 NZ_JJLL01000167.1 Protein Homology CDS 17143 17910 . - 0 ID=cds-WP_000222496.1;Parent=gene-AD11_RS26880;Dbxref=GenBank:WP_000222496.1;Name=WP_000222496.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313324.1;locus_tag=AD11_RS26880;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000222496.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 17920 19071 . - . ID=gene-AD11_RS26885;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AD11_RS26885;old_locus_tag=AD11_4786 NZ_JJLL01000167.1 Protein Homology CDS 17920 19071 . - 0 ID=cds-WP_001299707.1;Parent=gene-AD11_RS26885;Dbxref=GenBank:WP_001299707.1;Name=WP_001299707.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AD11_RS26885;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001299707.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 19187 20467 . - . ID=gene-AD11_RS26890;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AD11_RS26890;old_locus_tag=AD11_4787 NZ_JJLL01000167.1 Protein Homology CDS 19187 20467 . - 0 ID=cds-WP_001037378.1;Parent=gene-AD11_RS26890;Dbxref=GenBank:WP_001037378.1;Name=WP_001037378.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AD11_RS26890;product=DUF445 domain-containing protein;protein_id=WP_001037378.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 20508 21740 . - . ID=gene-AD11_RS26895;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AD11_RS26895;old_locus_tag=AD11_4788 NZ_JJLL01000167.1 Protein Homology CDS 20508 21740 . - 0 ID=cds-WP_001137019.1;Parent=gene-AD11_RS26895;Dbxref=GenBank:WP_001137019.1;Name=WP_001137019.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313327.1;locus_tag=AD11_RS26895;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001137019.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 22207 23151 . + . ID=gene-AD11_RS26900;Name=AD11_RS26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26900;old_locus_tag=AD11_4789 NZ_JJLL01000167.1 Protein Homology CDS 22207 23151 . + 0 ID=cds-WP_000181173.1;Parent=gene-AD11_RS26900;Dbxref=GenBank:WP_000181173.1;Name=WP_000181173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001678496.1;locus_tag=AD11_RS26900;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000181173.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 23394 24806 . - . ID=gene-AD11_RS26905;Name=yjiR;gbkey=Gene;gene=yjiR;gene_biotype=protein_coding;locus_tag=AD11_RS26905;old_locus_tag=AD11_4790 NZ_JJLL01000167.1 Protein Homology CDS 23394 24806 . - 0 ID=cds-WP_000199311.1;Parent=gene-AD11_RS26905;Dbxref=GenBank:WP_000199311.1;Name=WP_000199311.1;Ontology_term=GO:0030170;gbkey=CDS;gene=yjiR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418760.1;locus_tag=AD11_RS26905;product=PLP-dependent aminotransferase family protein;protein_id=WP_000199311.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 24983 25147 . + . ID=gene-AD11_RS26910;Name=yjiS;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=AD11_RS26910;old_locus_tag=AD11_4791 NZ_JJLL01000167.1 Protein Homology CDS 24983 25147 . + 0 ID=cds-WP_000394278.1;Parent=gene-AD11_RS26910;Dbxref=GenBank:WP_000394278.1;Name=WP_000394278.1;gbkey=CDS;gene=yjiS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786105.1;locus_tag=AD11_RS26910;product=DUF1127 domain-containing protein;protein_id=WP_000394278.1;transl_table=11 NZ_JJLL01000167.1 RefSeq pseudogene 25245 25898 . + . ID=gene-AD11_RS32795;Name=AD11_RS32795;end_range=25898,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32795;partial=true;pseudo=true NZ_JJLL01000167.1 Protein Homology CDS 25245 25898 . + 0 ID=cds-AD11_RS32795;Parent=gene-AD11_RS32795;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=25898,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015210.6;locus_tag=AD11_RS32795;partial=true;product=DUF262 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 26175 27338 . + . ID=gene-AD11_RS32800;Name=AD11_RS32800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS32800 NZ_JJLL01000167.1 Protein Homology CDS 26175 27338 . + 0 ID=cds-WP_071940936.1;Parent=gene-AD11_RS32800;Dbxref=GenBank:WP_071940936.1;Name=WP_071940936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313332.1;locus_tag=AD11_RS32800;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_071940936.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 27385 27726 . - . ID=gene-AD11_RS26920;Name=symE;gbkey=Gene;gene=symE;gene_biotype=protein_coding;locus_tag=AD11_RS26920;old_locus_tag=AD11_4793 NZ_JJLL01000167.1 Protein Homology CDS 27385 27726 . - 0 ID=cds-WP_000132623.1;Parent=gene-AD11_RS26920;Dbxref=GenBank:WP_000132623.1;Name=WP_000132623.1;gbkey=CDS;gene=symE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502675.1;locus_tag=AD11_RS26920;product=endoribonuclease SymE;protein_id=WP_000132623.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 27941 31204 . - . ID=gene-AD11_RS26925;Name=AD11_RS26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26925;old_locus_tag=AD11_4794 NZ_JJLL01000167.1 Protein Homology CDS 27941 31204 . - 0 ID=cds-WP_033866552.1;Parent=gene-AD11_RS26925;Dbxref=GenBank:WP_033866552.1;Name=WP_033866552.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000058881.1;locus_tag=AD11_RS26925;product=type I restriction endonuclease subunit R;protein_id=WP_033866552.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 31299 32696 . - . ID=gene-AD11_RS26930;Name=AD11_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26930;old_locus_tag=AD11_4795 NZ_JJLL01000167.1 Protein Homology CDS 31299 32696 . - 0 ID=cds-WP_000535016.1;Parent=gene-AD11_RS26930;Dbxref=GenBank:WP_000535016.1;Name=WP_000535016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000535016.1;locus_tag=AD11_RS26930;product=restriction endonuclease subunit S;protein_id=WP_000535016.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 32686 34305 . - . ID=gene-AD11_RS26935;Name=AD11_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26935;old_locus_tag=AD11_4796 NZ_JJLL01000167.1 Protein Homology CDS 32686 34305 . - 0 ID=cds-WP_001029742.1;Parent=gene-AD11_RS26935;Dbxref=GenBank:WP_001029742.1;Name=WP_001029742.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845607.1;locus_tag=AD11_RS26935;product=type I restriction-modification system subunit M;protein_id=WP_001029742.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 34369 35535 . - . ID=gene-AD11_RS26940;Name=AD11_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26940;old_locus_tag=AD11_4797 NZ_JJLL01000167.1 Protein Homology CDS 34369 35535 . - 0 ID=cds-WP_000800829.1;Parent=gene-AD11_RS26940;Dbxref=GenBank:WP_000800829.1;Name=WP_000800829.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800831.1;locus_tag=AD11_RS26940;product=restriction endonuclease;protein_id=WP_000800829.1;transl_table=11 NZ_JJLL01000167.1 RefSeq pseudogene 35732 35827 . + . ID=gene-AD11_RS32805;Name=AD11_RS32805;end_range=35827,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AD11_RS32805;old_locus_tag=AD11_4798;partial=true;pseudo=true NZ_JJLL01000167.1 Protein Homology CDS 35732 35827 . + 0 ID=cds-AD11_RS32805;Parent=gene-AD11_RS32805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=35827,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=AD11_RS32805;partial=true;product=BrnT family toxin;pseudo=true;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 35848 36150 . + . ID=gene-AD11_RS26950;Name=AD11_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS26950;old_locus_tag=AD11_4799 NZ_JJLL01000167.1 Protein Homology CDS 35848 36150 . + 0 ID=cds-WP_000063156.1;Parent=gene-AD11_RS26950;Dbxref=GenBank:WP_000063156.1;Name=WP_000063156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020443.1;locus_tag=AD11_RS26950;product=BrnA antitoxin family protein;protein_id=WP_000063156.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 36184 37140 . - . ID=gene-AD11_RS26955;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AD11_RS26955;old_locus_tag=AD11_4800 NZ_JJLL01000167.1 Protein Homology CDS 36184 37140 . - 0 ID=cds-WP_001297640.1;Parent=gene-AD11_RS26955;Dbxref=GenBank:WP_001297640.1;Name=WP_001297640.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AD11_RS26955;product=GTPase;protein_id=WP_001297640.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 37151 37354 . - . ID=gene-AD11_RS26960;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=AD11_RS26960;old_locus_tag=AD11_4801 NZ_JJLL01000167.1 Protein Homology CDS 37151 37354 . - 0 ID=cds-WP_000467859.1;Parent=gene-AD11_RS26960;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;gene=yjiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AD11_RS26960;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 37404 39554 . - . ID=gene-AD11_RS26965;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AD11_RS26965;old_locus_tag=AD11_4802 NZ_JJLL01000167.1 Protein Homology CDS 37404 39554 . - 0 ID=cds-WP_001295524.1;Parent=gene-AD11_RS26965;Dbxref=GenBank:WP_001295524.1;Name=WP_001295524.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418774.2;locus_tag=AD11_RS26965;product=pyruvate/proton symporter BtsT;protein_id=WP_001295524.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 39931 41595 . + . ID=gene-AD11_RS26975;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AD11_RS26975;old_locus_tag=AD11_4804 NZ_JJLL01000167.1 Protein Homology CDS 39931 41595 . + 0 ID=cds-WP_000919537.1;Parent=gene-AD11_RS26975;Dbxref=GenBank:WP_000919537.1;Name=WP_000919537.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313342.1;locus_tag=AD11_RS26975;product=methyl-accepting chemotaxis protein;protein_id=WP_000919537.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 41644 43005 . - . ID=gene-AD11_RS26980;Name=lgoT;gbkey=Gene;gene=lgoT;gene_biotype=protein_coding;locus_tag=AD11_RS26980;old_locus_tag=AD11_4805 NZ_JJLL01000167.1 Protein Homology CDS 41644 43005 . - 0 ID=cds-WP_000410143.1;Parent=gene-AD11_RS26980;Dbxref=GenBank:WP_000410143.1;Name=WP_000410143.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313343.1;locus_tag=AD11_RS26980;product=MFS transporter;protein_id=WP_000410143.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 43219 44133 . - . ID=gene-AD11_RS26985;Name=lgoR;gbkey=Gene;gene=lgoR;gene_biotype=protein_coding;locus_tag=AD11_RS26985;old_locus_tag=AD11_4806 NZ_JJLL01000167.1 Protein Homology CDS 43219 44133 . - 0 ID=cds-WP_000091572.1;Parent=gene-AD11_RS26985;Dbxref=GenBank:WP_000091572.1;Name=WP_000091572.1;gbkey=CDS;gene=lgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313344.2;locus_tag=AD11_RS26985;product=GntR family transcriptional regulator;protein_id=WP_000091572.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 44272 45294 . + . ID=gene-AD11_RS26990;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AD11_RS26990;old_locus_tag=AD11_4807 NZ_JJLL01000167.1 Protein Homology CDS 44272 45294 . + 0 ID=cds-WP_000106029.1;Parent=gene-AD11_RS26990;Dbxref=GenBank:WP_000106029.1;Name=WP_000106029.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AD11_RS26990;product=L-galactonate oxidoreductase;protein_id=WP_000106029.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 45433 47724 . - . ID=gene-AD11_RS26995;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AD11_RS26995;old_locus_tag=AD11_4808 NZ_JJLL01000167.1 Protein Homology CDS 45433 47724 . - 0 ID=cds-WP_001292659.1;Parent=gene-AD11_RS26995;Dbxref=GenBank:WP_001292659.1;Name=WP_001292659.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AD11_RS26995;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292659.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 47978 48472 . - . ID=gene-AD11_RS27000;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AD11_RS27000;old_locus_tag=AD11_4809 NZ_JJLL01000167.1 Protein Homology CDS 47978 48472 . - 0 ID=cds-WP_001308243.1;Parent=gene-AD11_RS27000;Dbxref=GenBank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AD11_RS27000;product=DUF2501 domain-containing protein YjjA;protein_id=WP_001308243.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 48521 49258 . - . ID=gene-AD11_RS27005;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AD11_RS27005;old_locus_tag=AD11_4810 NZ_JJLL01000167.1 Protein Homology CDS 48521 49258 . - 0 ID=cds-WP_000799911.1;Parent=gene-AD11_RS27005;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AD11_RS27005;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 49261 49800 . - . ID=gene-AD11_RS27010;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AD11_RS27010;old_locus_tag=AD11_4811 NZ_JJLL01000167.1 Protein Homology CDS 49261 49800 . - 0 ID=cds-WP_000098818.1;Parent=gene-AD11_RS27010;Dbxref=GenBank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AD11_RS27010;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 49908 50381 . - . ID=gene-AD11_RS27015;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=AD11_RS27015;old_locus_tag=AD11_4812 NZ_JJLL01000167.1 Protein Homology CDS 49908 50381 . - 0 ID=cds-WP_000538188.1;Parent=gene-AD11_RS27015;Dbxref=GenBank:WP_000538188.1;Name=WP_000538188.1;gbkey=CDS;gene=yjjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AD11_RS27015;product=threonine/serine exporter;protein_id=WP_000538188.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 50372 51142 . - . ID=gene-AD11_RS27020;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;locus_tag=AD11_RS27020;old_locus_tag=AD11_4813 NZ_JJLL01000167.1 Protein Homology CDS 50372 51142 . - 0 ID=cds-WP_001295409.1;Parent=gene-AD11_RS27020;Dbxref=GenBank:WP_001295409.1;Name=WP_001295409.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yjjP;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AD11_RS27020;product=threonine/serine ThrE exporter family protein;protein_id=WP_001295409.1;transl_table=11 NZ_JJLL01000167.1 RefSeq pseudogene 51761 52486 . + . ID=gene-AD11_RS27025;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=pseudogene;locus_tag=AD11_RS27025;old_locus_tag=AD11_4814;pseudo=true NZ_JJLL01000167.1 Protein Homology CDS 51761 52486 . + 0 ID=cds-AD11_RS27025;Parent=gene-AD11_RS27025;Note=internal stop;gbkey=CDS;gene=yjjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AD11_RS27025;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 52444 53121 . + . ID=gene-AD11_RS27030;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AD11_RS27030;old_locus_tag=AD11_4815 NZ_JJLL01000167.1 Protein Homology CDS 52444 53121 . + 0 ID=cds-WP_001301727.1;Parent=gene-AD11_RS27030;Dbxref=GenBank:WP_001301727.1;Name=WP_001301727.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AD11_RS27030;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001301727.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 53159 53947 . - . ID=gene-AD11_RS27035;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AD11_RS27035;old_locus_tag=AD11_4816 NZ_JJLL01000167.1 Protein Homology CDS 53159 53947 . - 0 ID=cds-WP_000331578.1;Parent=gene-AD11_RS27035;Dbxref=GenBank:WP_000331578.1;Name=WP_000331578.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710108.1;locus_tag=AD11_RS27035;product=siderophore-iron reductase FhuF;protein_id=WP_000331578.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 54088 54324 . + . ID=gene-AD11_RS27040;Name=yjjZ;gbkey=Gene;gene=yjjZ;gene_biotype=protein_coding;locus_tag=AD11_RS27040;old_locus_tag=AD11_4817 NZ_JJLL01000167.1 Protein Homology CDS 54088 54324 . + 0 ID=cds-WP_016236446.1;Parent=gene-AD11_RS27040;Dbxref=GenBank:WP_016236446.1;Name=WP_016236446.1;gbkey=CDS;gene=yjjZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588478.1;locus_tag=AD11_RS27040;product=DUF1435 domain-containing protein;protein_id=WP_016236446.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 54363 54449 . - . ID=gene-AD11_RS27045;Name=AD11_RS27045;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS27045;old_locus_tag=AD11_4818 NZ_JJLL01000167.1 tRNAscan-SE tRNA 54363 54449 . - . ID=rna-AD11_RS27045;Parent=gene-AD11_RS27045;anticodon=(pos:complement(54413..54415));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27045;product=tRNA-Leu NZ_JJLL01000167.1 tRNAscan-SE exon 54363 54449 . - . ID=exon-AD11_RS27045-1;Parent=rna-AD11_RS27045;anticodon=(pos:complement(54413..54415));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27045;product=tRNA-Leu NZ_JJLL01000167.1 RefSeq gene 54484 54570 . - . ID=gene-AD11_RS27050;Name=AD11_RS27050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS27050;old_locus_tag=AD11_4819 NZ_JJLL01000167.1 tRNAscan-SE tRNA 54484 54570 . - . ID=rna-AD11_RS27050;Parent=gene-AD11_RS27050;anticodon=(pos:complement(54534..54536));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27050;product=tRNA-Leu NZ_JJLL01000167.1 tRNAscan-SE exon 54484 54570 . - . ID=exon-AD11_RS27050-1;Parent=rna-AD11_RS27050;anticodon=(pos:complement(54534..54536));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27050;product=tRNA-Leu NZ_JJLL01000167.1 RefSeq gene 54599 54685 . - . ID=gene-AD11_RS27055;Name=AD11_RS27055;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS27055;old_locus_tag=AD11_4820 NZ_JJLL01000167.1 tRNAscan-SE tRNA 54599 54685 . - . ID=rna-AD11_RS27055;Parent=gene-AD11_RS27055;anticodon=(pos:complement(54649..54651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27055;product=tRNA-Leu NZ_JJLL01000167.1 tRNAscan-SE exon 54599 54685 . - . ID=exon-AD11_RS27055-1;Parent=rna-AD11_RS27055;anticodon=(pos:complement(54649..54651));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27055;product=tRNA-Leu NZ_JJLL01000167.1 RefSeq gene 54720 54806 . - . ID=gene-AD11_RS27060;Name=AD11_RS27060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS27060;old_locus_tag=AD11_4821 NZ_JJLL01000167.1 tRNAscan-SE tRNA 54720 54806 . - . ID=rna-AD11_RS27060;Parent=gene-AD11_RS27060;anticodon=(pos:complement(54770..54772));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27060;product=tRNA-Leu NZ_JJLL01000167.1 tRNAscan-SE exon 54720 54806 . - . ID=exon-AD11_RS27060-1;Parent=rna-AD11_RS27060;anticodon=(pos:complement(54770..54772));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27060;product=tRNA-Leu NZ_JJLL01000167.1 RefSeq gene 54835 54921 . - . ID=gene-AD11_RS27065;Name=AD11_RS27065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AD11_RS27065;old_locus_tag=AD11_4822 NZ_JJLL01000167.1 tRNAscan-SE tRNA 54835 54921 . - . ID=rna-AD11_RS27065;Parent=gene-AD11_RS27065;anticodon=(pos:complement(54885..54887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27065;product=tRNA-Leu NZ_JJLL01000167.1 tRNAscan-SE exon 54835 54921 . - . ID=exon-AD11_RS27065-1;Parent=rna-AD11_RS27065;anticodon=(pos:complement(54885..54887));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AD11_RS27065;product=tRNA-Leu NZ_JJLL01000167.1 RefSeq gene 55223 56254 . - . ID=gene-AD11_RS27075;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AD11_RS27075;old_locus_tag=AD11_4823 NZ_JJLL01000167.1 Protein Homology CDS 55223 56254 . - 0 ID=cds-WP_001272323.1;Parent=gene-AD11_RS27075;Dbxref=GenBank:WP_001272323.1;Name=WP_001272323.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AD11_RS27075;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272323.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 56357 56770 . + . ID=gene-AD11_RS27080;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AD11_RS27080;old_locus_tag=AD11_4824 NZ_JJLL01000167.1 Protein Homology CDS 56357 56770 . + 0 ID=cds-WP_000204018.1;Parent=gene-AD11_RS27080;Dbxref=GenBank:WP_000204018.1;Name=WP_000204018.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AD11_RS27080;product=DNA polymerase III subunit psi;protein_id=WP_000204018.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 56739 57185 . + . ID=gene-AD11_RS27085;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AD11_RS27085;old_locus_tag=AD11_4825 NZ_JJLL01000167.1 Protein Homology CDS 56739 57185 . + 0 ID=cds-WP_001092459.1;Parent=gene-AD11_RS27085;Dbxref=GenBank:WP_001092459.1;Name=WP_001092459.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AD11_RS27085;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092459.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 57200 57877 . + . ID=gene-AD11_RS27090;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AD11_RS27090;old_locus_tag=AD11_4826 NZ_JJLL01000167.1 Protein Homology CDS 57200 57877 . + 0 ID=cds-WP_000870700.1;Parent=gene-AD11_RS27090;Dbxref=GenBank:WP_000870700.1;Name=WP_000870700.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710113.1;locus_tag=AD11_RS27090;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870700.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 57968 59557 . + . ID=gene-AD11_RS27095;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AD11_RS27095;old_locus_tag=AD11_4827 NZ_JJLL01000167.1 Protein Homology CDS 57968 59557 . + 0 ID=cds-WP_000175940.1;Parent=gene-AD11_RS27095;Dbxref=GenBank:WP_000175940.1;Name=WP_000175940.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AD11_RS27095;product=peptide chain release factor 3;protein_id=WP_000175940.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 59950 60555 . + . ID=gene-AD11_RS27100;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AD11_RS27100;old_locus_tag=AD11_4828 NZ_JJLL01000167.1 Protein Homology CDS 59950 60555 . + 0 ID=cds-WP_001295410.1;Parent=gene-AD11_RS27100;Dbxref=GenBank:WP_001295410.1;Name=WP_001295410.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710115.2;locus_tag=AD11_RS27100;product=molecular chaperone OsmY;protein_id=WP_001295410.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 60682 60843 . + . ID=gene-AD11_RS27105;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=AD11_RS27105;old_locus_tag=AD11_4829 NZ_JJLL01000167.1 Protein Homology CDS 60682 60843 . + 0 ID=cds-WP_000490275.1;Parent=gene-AD11_RS27105;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;gene=ytjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AD11_RS27105;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 60965 62038 . + . ID=gene-AD11_RS27110;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=AD11_RS27110;old_locus_tag=AD11_4830 NZ_JJLL01000167.1 Protein Homology CDS 60965 62038 . + 0 ID=cds-WP_001299799.1;Parent=gene-AD11_RS27110;Dbxref=GenBank:WP_001299799.1;Name=WP_001299799.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AD11_RS27110;product=patatin-like phospholipase family protein;protein_id=WP_001299799.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 62035 62817 . + . ID=gene-AD11_RS27115;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AD11_RS27115;old_locus_tag=AD11_4831 NZ_JJLL01000167.1 Protein Homology CDS 62035 62817 . + 0 ID=cds-WP_000563058.1;Parent=gene-AD11_RS27115;Dbxref=GenBank:WP_000563058.1;Name=WP_000563058.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AD11_RS27115;product=metal-dependent hydrolase;protein_id=WP_000563058.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 62930 63793 . - . ID=gene-AD11_RS27120;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AD11_RS27120;old_locus_tag=AD11_4832 NZ_JJLL01000167.1 Protein Homology CDS 62930 63793 . - 0 ID=cds-WP_001088407.1;Parent=gene-AD11_RS27120;Dbxref=GenBank:WP_001088407.1;Name=WP_001088407.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AD11_RS27120;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088407.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 63765 65315 . - . ID=gene-AD11_RS27125;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AD11_RS27125;old_locus_tag=AD11_4833 NZ_JJLL01000167.1 Protein Homology CDS 63765 65315 . - 0 ID=cds-WP_001143209.1;Parent=gene-AD11_RS27125;Dbxref=GenBank:WP_001143209.1;Name=WP_001143209.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AD11_RS27125;product=YjjI family glycine radical enzyme;protein_id=WP_001143209.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 65573 66352 . + . ID=gene-AD11_RS27135;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AD11_RS27135;old_locus_tag=AD11_4835 NZ_JJLL01000167.1 Protein Homology CDS 65573 66352 . + 0 ID=cds-WP_001298497.1;Parent=gene-AD11_RS27135;Dbxref=GenBank:WP_001298497.1;Name=WP_001298497.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AD11_RS27135;product=deoxyribose-phosphate aldolase;protein_id=WP_001298497.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 66430 67752 . + . ID=gene-AD11_RS27140;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AD11_RS27140;old_locus_tag=AD11_4836 NZ_JJLL01000167.1 Protein Homology CDS 66430 67752 . + 0 ID=cds-WP_000477811.1;Parent=gene-AD11_RS27140;Dbxref=GenBank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AD11_RS27140;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 67804 69027 . + . ID=gene-AD11_RS27145;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AD11_RS27145;old_locus_tag=AD11_4837 NZ_JJLL01000167.1 Protein Homology CDS 67804 69027 . + 0 ID=cds-WP_000816471.1;Parent=gene-AD11_RS27145;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AD11_RS27145;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 69107 69826 . + . ID=gene-AD11_RS27150;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AD11_RS27150;old_locus_tag=AD11_4838 NZ_JJLL01000167.1 Protein Homology CDS 69107 69826 . + 0 ID=cds-WP_000224879.1;Parent=gene-AD11_RS27150;Dbxref=GenBank:WP_000224879.1;Name=WP_000224879.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710124.2;locus_tag=AD11_RS27150;product=purine-nucleoside phosphorylase;protein_id=WP_000224879.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 69993 71324 . + . ID=gene-AD11_RS27155;Name=yjjJ;gbkey=Gene;gene=yjjJ;gene_biotype=protein_coding;locus_tag=AD11_RS27155;old_locus_tag=AD11_4839 NZ_JJLL01000167.1 Protein Homology CDS 69993 71324 . + 0 ID=cds-WP_001293118.1;Parent=gene-AD11_RS27155;Dbxref=GenBank:WP_001293118.1;Name=WP_001293118.1;gbkey=CDS;gene=yjjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418802.1;locus_tag=AD11_RS27155;product=type II toxin-antitoxin system HipA family toxin YjjJ;protein_id=WP_001293118.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 71325 72341 . - . ID=gene-AD11_RS31850;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AD11_RS31850;old_locus_tag=AD11_4840 NZ_JJLL01000167.1 Protein Homology CDS 71325 72341 . - 0 ID=cds-WP_000105881.1;Parent=gene-AD11_RS31850;Dbxref=GenBank:WP_000105881.1;Name=WP_000105881.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AD11_RS31850;product=lipoate--protein ligase LplA;protein_id=WP_000105881.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 72369 73013 . - . ID=gene-AD11_RS31855;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AD11_RS31855;old_locus_tag=AD11_4841 NZ_JJLL01000167.1 Protein Homology CDS 72369 73013 . - 0 ID=cds-WP_000124615.1;Parent=gene-AD11_RS31855;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AD11_RS31855;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 73119 74087 . + . ID=gene-AD11_RS27170;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AD11_RS27170;old_locus_tag=AD11_4842 NZ_JJLL01000167.1 Protein Homology CDS 73119 74087 . + 0 ID=cds-WP_001132956.1;Parent=gene-AD11_RS27170;Dbxref=GenBank:WP_001132956.1;Name=WP_001132956.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AD11_RS27170;product=phosphoserine phosphatase;protein_id=WP_001132956.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 74136 75518 . + . ID=gene-AD11_RS27175;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AD11_RS27175;old_locus_tag=AD11_4843 NZ_JJLL01000167.1 Protein Homology CDS 74136 75518 . + 0 ID=cds-WP_001029702.1;Parent=gene-AD11_RS27175;Dbxref=GenBank:WP_001029702.1;Name=WP_001029702.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AD11_RS27175;product=DNA repair protein RadA;protein_id=WP_001029702.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 75539 76771 . + . ID=gene-AD11_RS27180;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AD11_RS27180;old_locus_tag=AD11_4844 NZ_JJLL01000167.1 Protein Homology CDS 75539 76771 . + 0 ID=cds-WP_000093812.1;Parent=gene-AD11_RS27180;Dbxref=GenBank:WP_000093812.1;Name=WP_000093812.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=AD11_RS27180;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093812.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 76805 76972 . + . ID=gene-AD11_RS32155;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=AD11_RS32155;old_locus_tag=AD11_4845 NZ_JJLL01000167.1 Protein Homology CDS 76805 76972 . + 0 ID=cds-WP_000007444.1;Parent=gene-AD11_RS32155;Dbxref=GenBank:WP_000007444.1;Name=WP_000007444.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007431.1;locus_tag=AD11_RS32155;product=NadS family protein;protein_id=WP_000007444.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 77079 78746 . - . ID=gene-AD11_RS27190;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AD11_RS27190;old_locus_tag=AD11_4846 NZ_JJLL01000167.1 Protein Homology CDS 77079 78746 . - 0 ID=cds-WP_000046749.1;Parent=gene-AD11_RS27190;Dbxref=GenBank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AD11_RS27190;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 78957 80894 . + . ID=gene-AD11_RS27195;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AD11_RS27195;old_locus_tag=AD11_4848 NZ_JJLL01000167.1 Protein Homology CDS 78957 80894 . + 0 ID=cds-WP_000409470.1;Parent=gene-AD11_RS27195;Dbxref=GenBank:WP_000409470.1;Name=WP_000409470.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AD11_RS27195;product=murein transglycosylase;protein_id=WP_000409470.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 80984 81310 . + . ID=gene-AD11_RS27200;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AD11_RS27200;old_locus_tag=AD11_4849 NZ_JJLL01000167.1 Protein Homology CDS 80984 81310 . + 0 ID=cds-WP_000068678.1;Parent=gene-AD11_RS27200;Dbxref=GenBank:WP_000068678.1;Name=WP_000068678.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068676.1;locus_tag=AD11_RS27200;product=trp operon repressor;protein_id=WP_000068678.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 81304 81819 . - . ID=gene-AD11_RS27205;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AD11_RS27205;old_locus_tag=AD11_4850 NZ_JJLL01000167.1 Protein Homology CDS 81304 81819 . - 0 ID=cds-WP_001570904.1;Parent=gene-AD11_RS27205;Dbxref=GenBank:WP_001570904.1;Name=WP_001570904.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309202.1;locus_tag=AD11_RS27205;product=inosine/xanthosine triphosphatase;protein_id=WP_001570904.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 81871 82518 . + . ID=gene-AD11_RS27210;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AD11_RS27210;old_locus_tag=AD11_4851 NZ_JJLL01000167.1 Protein Homology CDS 81871 82518 . + 0 ID=cds-WP_000942347.1;Parent=gene-AD11_RS27210;Dbxref=GenBank:WP_000942347.1;Name=WP_000942347.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AD11_RS27210;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942347.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 82515 83384 . - . ID=gene-AD11_RS27215;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AD11_RS27215;old_locus_tag=AD11_4852 NZ_JJLL01000167.1 Protein Homology CDS 82515 83384 . - 0 ID=cds-WP_000371666.1;Parent=gene-AD11_RS27215;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AD11_RS27215;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 83595 84068 . + . ID=gene-AD11_RS27220;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AD11_RS27220;old_locus_tag=AD11_4853 NZ_JJLL01000167.1 Protein Homology CDS 83595 84068 . + 0 ID=cds-WP_000875487.1;Parent=gene-AD11_RS27220;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AD11_RS27220;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 84081 84770 . + . ID=gene-AD11_RS27225;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AD11_RS27225;old_locus_tag=AD11_4854 NZ_JJLL01000167.1 Protein Homology CDS 84081 84770 . + 0 ID=cds-WP_001188654.1;Parent=gene-AD11_RS27225;Dbxref=GenBank:WP_001188654.1;Name=WP_001188654.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418815.1;locus_tag=AD11_RS27225;product=two-component system response regulator CreB;protein_id=WP_001188654.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 84770 86194 . + . ID=gene-AD11_RS27230;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AD11_RS27230;old_locus_tag=AD11_4855 NZ_JJLL01000167.1 Protein Homology CDS 84770 86194 . + 0 ID=cds-WP_033865965.1;Parent=gene-AD11_RS27230;Dbxref=GenBank:WP_033865965.1;Name=WP_033865965.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418816.1;locus_tag=AD11_RS27230;product=two-component system sensor histidine kinase CreC;protein_id=WP_033865965.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 86252 87604 . + . ID=gene-AD11_RS27235;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AD11_RS27235;old_locus_tag=AD11_4856 NZ_JJLL01000167.1 Protein Homology CDS 86252 87604 . + 0 ID=cds-WP_000920294.1;Parent=gene-AD11_RS27235;Dbxref=GenBank:WP_000920294.1;Name=WP_000920294.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418817.1;locus_tag=AD11_RS27235;product=cell envelope integrity protein CreD;protein_id=WP_000920294.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 87664 88380 . - . ID=gene-AD11_RS27240;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AD11_RS27240;old_locus_tag=AD11_4857 NZ_JJLL01000167.1 Protein Homology CDS 87664 88380 . - 0 ID=cds-WP_001194358.1;Parent=gene-AD11_RS27240;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AD11_RS27240;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 88476 88616 . + . ID=gene-AD11_RS27245;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AD11_RS27245 NZ_JJLL01000167.1 Protein Homology CDS 88476 88616 . + 0 ID=cds-WP_001303782.1;Parent=gene-AD11_RS27245;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AD11_RS27245;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 89016 89702 . + . ID=gene-AD11_RS27250;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AD11_RS27250;old_locus_tag=AD11_4858 NZ_JJLL01000167.1 Protein Homology CDS 89016 89702 . + 0 ID=cds-WP_001223132.1;Parent=gene-AD11_RS27250;Dbxref=GenBank:WP_001223132.1;Name=WP_001223132.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418820.1;locus_tag=AD11_RS27250;product=tRNA/rRNA methyltransferase;protein_id=WP_001223132.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 89915 89980 . + . ID=gene-AD11_RS27255;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AD11_RS27255 NZ_JJLL01000167.1 Protein Homology CDS 89915 89980 . + 0 ID=cds-WP_001386572.1;Parent=gene-AD11_RS27255;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AD11_RS27255;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JJLL01000167.1 cmsearch sequence_feature 89916 90035 . + . ID=id-NZ_JJLL01000167.1:89916..90035;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLL01000167.1 RefSeq gene 90062 92524 . + . ID=gene-AD11_RS27260;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AD11_RS27260;old_locus_tag=AD11_4859 NZ_JJLL01000167.1 Protein Homology CDS 90062 92524 . + 0 ID=cds-WP_001264707.1;Parent=gene-AD11_RS27260;Dbxref=GenBank:WP_001264707.1;Name=WP_001264707.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AD11_RS27260;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264707.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 92526 93458 . + . ID=gene-AD11_RS27265;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AD11_RS27265;old_locus_tag=AD11_4860 NZ_JJLL01000167.1 Protein Homology CDS 92526 93458 . + 0 ID=cds-WP_000241662.1;Parent=gene-AD11_RS27265;Dbxref=GenBank:WP_000241662.1;Name=WP_000241662.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414544.1;locus_tag=AD11_RS27265;product=homoserine kinase;protein_id=WP_000241662.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 93459 94745 . + . ID=gene-AD11_RS27270;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AD11_RS27270;old_locus_tag=AD11_4861 NZ_JJLL01000167.1 Protein Homology CDS 93459 94745 . + 0 ID=cds-WP_000781074.1;Parent=gene-AD11_RS27270;Dbxref=GenBank:WP_000781074.1;Name=WP_000781074.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414545.1;locus_tag=AD11_RS27270;product=threonine synthase;protein_id=WP_000781074.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 94959 95255 . + . ID=gene-AD11_RS27280;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=AD11_RS27280;old_locus_tag=AD11_4862 NZ_JJLL01000167.1 Protein Homology CDS 94959 95255 . + 0 ID=cds-WP_000738719.1;Parent=gene-AD11_RS27280;Dbxref=GenBank:WP_000738719.1;Name=WP_000738719.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414546.1;locus_tag=AD11_RS27280;product=DUF2502 domain-containing protein;protein_id=WP_000738719.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 95408 96184 . - . ID=gene-AD11_RS27285;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AD11_RS27285;old_locus_tag=AD11_4863 NZ_JJLL01000167.1 Protein Homology CDS 95408 96184 . - 0 ID=cds-WP_000906197.1;Parent=gene-AD11_RS27285;Dbxref=GenBank:WP_000906197.1;Name=WP_000906197.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414547.1;locus_tag=AD11_RS27285;product=peroxide stress protein YaaA;protein_id=WP_000906197.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 96254 97684 . - . ID=gene-AD11_RS27290;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=AD11_RS27290;old_locus_tag=AD11_4864 NZ_JJLL01000167.1 Protein Homology CDS 96254 97684 . - 0 ID=cds-WP_001112606.1;Parent=gene-AD11_RS27290;Dbxref=GenBank:WP_001112606.1;Name=WP_001112606.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;gene=yaaJ;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414548.1;locus_tag=AD11_RS27290;product=alanine/glycine:cation symporter family protein;protein_id=WP_001112606.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 97963 98916 . + . ID=gene-AD11_RS27295;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AD11_RS27295;old_locus_tag=AD11_4865 NZ_JJLL01000167.1 Protein Homology CDS 97963 98916 . + 0 ID=cds-WP_000130185.1;Parent=gene-AD11_RS27295;Dbxref=GenBank:WP_000130185.1;Name=WP_000130185.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AD11_RS27295;product=transaldolase;protein_id=WP_000130185.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 99031 99618 . + . ID=gene-AD11_RS27300;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AD11_RS27300;old_locus_tag=AD11_4866 NZ_JJLL01000167.1 Protein Homology CDS 99031 99618 . + 0 ID=cds-WP_001295414.1;Parent=gene-AD11_RS27300;Dbxref=GenBank:WP_001295414.1;Name=WP_001295414.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AD11_RS27300;product=molybdopterin adenylyltransferase;protein_id=WP_001295414.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 99653 100219 . - . ID=gene-AD11_RS27305;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AD11_RS27305;old_locus_tag=AD11_4867 NZ_JJLL01000167.1 Protein Homology CDS 99653 100219 . - 0 ID=cds-WP_000528538.1;Parent=gene-AD11_RS27305;Dbxref=GenBank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AD11_RS27305;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 100368 101081 . - . ID=gene-AD11_RS27310;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AD11_RS27310;old_locus_tag=AD11_4868 NZ_JJLL01000167.1 Protein Homology CDS 100368 101081 . - 0 ID=cds-WP_001102367.1;Parent=gene-AD11_RS27310;Dbxref=GenBank:WP_001102367.1;Name=WP_001102367.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AD11_RS27310;product=acidic protein MsyB;protein_id=WP_001102367.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 101107 101511 . - . ID=gene-AD11_RS27315;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=AD11_RS27315;old_locus_tag=AD11_4869 NZ_JJLL01000167.1 Protein Homology CDS 101107 101511 . - 0 ID=cds-WP_000843565.1;Parent=gene-AD11_RS27315;Dbxref=GenBank:WP_000843565.1;Name=WP_000843565.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414554.1;locus_tag=AD11_RS27315;product=DUF2541 family protein;protein_id=WP_000843565.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 101888 103804 . + . ID=gene-AD11_RS27320;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AD11_RS27320;old_locus_tag=AD11_4870 NZ_JJLL01000167.1 Protein Homology CDS 101888 103804 . + 0 ID=cds-WP_000516135.1;Parent=gene-AD11_RS27320;Dbxref=GenBank:WP_000516135.1;Name=WP_000516135.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AD11_RS27320;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 103893 105023 . + . ID=gene-AD11_RS27325;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AD11_RS27325;old_locus_tag=AD11_4871 NZ_JJLL01000167.1 Protein Homology CDS 103893 105023 . + 0 ID=cds-WP_001118476.1;Parent=gene-AD11_RS27325;Dbxref=GenBank:WP_001118476.1;Name=WP_001118476.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414556.1;locus_tag=AD11_RS27325;product=molecular chaperone DnaJ;protein_id=WP_001118476.1;transl_table=11 NZ_JJLL01000167.1 RefSeq gene 105286 106398 . - . ID=gene-AD11_RS27330;Name=AD11_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS27330;old_locus_tag=AD11_4872 NZ_JJLL01000167.1 Protein Homology CDS 105286 106398 . - 0 ID=cds-WP_001300563.1-7;Parent=gene-AD11_RS27330;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AD11_RS27330;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JJLL01000168.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444246 NZ_JJLL01000168.1 RefSeq region 1 2047 . + . ID=NZ_JJLL01000168.1:1..2047;Dbxref=taxon:1444246;collection-date=2009-07-04;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S4_C2 NZ_JJLL01000168.1 RefSeq gene 1 721 . + . ID=gene-AD11_RS27335;Name=AD11_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AD11_RS27335;old_locus_tag=AD11_4873;partial=true;start_range=.,1 NZ_JJLL01000168.1 Protein Homology CDS 1 721 . + 1 ID=cds-WP_033866554.1;Parent=gene-AD11_RS27335;Dbxref=GenBank:WP_033866554.1;Name=WP_033866554.1;Ontology_term=GO:0006206;gbkey=CDS;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AD11_RS27335;partial=true;product=thymidine phosphorylase;protein_id=WP_033866554.1;start_range=.,1;transl_table=11 NZ_JJLL01000168.1 RefSeq gene 773 1996 . + . ID=gene-AD11_RS27340;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AD11_RS27340;old_locus_tag=AD11_4874 NZ_JJLL01000168.1 Protein Homology CDS 773 1996 . + 0 ID=cds-WP_000816471.1-2;Parent=gene-AD11_RS27340;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AD11_RS27340;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 ###