##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM62729v1 #!genome-build-accession NCBI_Assembly:GCF_000627295.1 #!annotation-date 06/16/2025 09:03:33 #!annotation-source NCBI RefSeq GCF_000627295.1-RS_2025_06_16 ##sequence-region NZ_JJLR01000001.1 1 3333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000001.1 RefSeq region 1 3333 . + . ID=NZ_JJLR01000001.1:1..3333;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000001.1 RefSeq gene 1 271 . - . ID=gene-AC57_RS22985;Name=AC57_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22985;old_locus_tag=AC57_0001;partial=true;start_range=.,1 NZ_JJLR01000001.1 Protein Homology CDS 1 271 . - 0 ID=cds-WP_000179209.1;Parent=gene-AC57_RS22985;Dbxref=GenBank:WP_000179209.1;Name=WP_000179209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS22985;partial=true;product=IS1-like element transposase;protein_id=WP_000179209.1;start_range=.,1;transl_table=11 NZ_JJLR01000001.1 RefSeq gene 423 2018 . - . ID=gene-AC57_RS22980;Name=AC57_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22980;old_locus_tag=AC57_0002 NZ_JJLR01000001.1 Protein Homology CDS 423 2018 . - 0 ID=cds-WP_024186871.1;Parent=gene-AC57_RS22980;Dbxref=GenBank:WP_024186871.1;Name=WP_024186871.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870187.1;locus_tag=AC57_RS22980;product=UxaA family hydrolase;protein_id=WP_024186871.1;transl_table=11 NZ_JJLR01000001.1 RefSeq pseudogene 2052 2978 . - . ID=gene-AC57_RS22975;Name=AC57_RS22975;end_range=2978,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS22975;old_locus_tag=AC57_0003;partial=true;pseudo=true NZ_JJLR01000001.1 Protein Homology CDS 2052 2978 . - 0 ID=cds-AC57_RS22975;Parent=gene-AC57_RS22975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=2978,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284214.1;locus_tag=AC57_RS22975;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_JJLR01000001.1 RefSeq pseudogene 3149 3333 . - . ID=gene-AC57_RS0122990;Name=AC57_RS0122990;end_range=3333,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0122990;partial=true;pseudo=true NZ_JJLR01000001.1 Protein Homology CDS 3149 3333 . - 2 ID=cds-AC57_RS0122990;Parent=gene-AC57_RS0122990;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0122990;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000002.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000002.1 RefSeq region 1 425 . + . ID=NZ_JJLR01000002.1:1..425;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000002.1 RefSeq gene 1 425 . - . ID=gene-AC57_RS0122995;Name=AC57_RS0122995;end_range=425,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0122995;old_locus_tag=AC57_0004;partial=true;start_range=.,1 NZ_JJLR01000002.1 Protein Homology CDS 1 425 . - 1 ID=cds-WP_032285616.1;Parent=gene-AC57_RS0122995;Dbxref=GenBank:WP_032285616.1;Name=WP_032285616.1;end_range=425,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0122995;partial=true;product=IS4 family transposase;protein_id=WP_032285616.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000003.1 1 934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000003.1 RefSeq region 1 934 . + . ID=NZ_JJLR01000003.1:1..934;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000003.1 RefSeq pseudogene 1 125 . + . ID=gene-AC57_RS0123000;Name=AC57_RS0123000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123000;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000003.1 Protein Homology CDS 1 125 . + 2 ID=cds-AC57_RS0123000;Parent=gene-AC57_RS0123000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0123000;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000003.1 RefSeq gene 319 471 . - . ID=gene-AC57_RS0123005;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AC57_RS0123005 NZ_JJLR01000003.1 Protein Homology CDS 319 471 . - 0 ID=cds-WP_000809168.1;Parent=gene-AC57_RS0123005;Dbxref=GenBank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AC57_RS0123005;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11 NZ_JJLR01000003.1 RefSeq gene 699 934 . + . ID=gene-AC57_RS0123010;Name=AC57_RS0123010;end_range=934,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123010;old_locus_tag=AC57_0005;partial=true NZ_JJLR01000003.1 Protein Homology CDS 699 934 . + 0 ID=cds-WP_000179207.1;Parent=gene-AC57_RS0123010;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;end_range=934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123010;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;transl_table=11 ##sequence-region NZ_JJLR01000004.1 1 23182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000004.1 RefSeq region 1 23182 . + . ID=NZ_JJLR01000004.1:1..23182;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000004.1 RefSeq gene 1 250 . + . ID=gene-AC57_RS22970;Name=AC57_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22970;old_locus_tag=AC57_0006;partial=true;start_range=.,1 NZ_JJLR01000004.1 Protein Homology CDS 1 250 . + 1 ID=cds-WP_000674744.1;Parent=gene-AC57_RS22970;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS22970;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;start_range=.,1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 688 1854 . + . ID=gene-AC57_RS22965;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AC57_RS22965;old_locus_tag=AC57_0007 NZ_JJLR01000004.1 Protein Homology CDS 688 1854 . + 0 ID=cds-WP_000681368.1;Parent=gene-AC57_RS22965;Dbxref=GenBank:WP_000681368.1;Name=WP_000681368.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308044.1;locus_tag=AC57_RS22965;product=Na+/H+ antiporter NhaA;protein_id=WP_000681368.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 1920 2819 . + . ID=gene-AC57_RS22960;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AC57_RS22960;old_locus_tag=AC57_0008 NZ_JJLR01000004.1 Protein Homology CDS 1920 2819 . + 0 ID=cds-WP_001360397.1;Parent=gene-AC57_RS22960;Dbxref=GenBank:WP_001360397.1;Name=WP_001360397.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AC57_RS22960;product=transcriptional activator NhaR;protein_id=WP_001360397.1;transl_table=11 NZ_JJLR01000004.1 RefSeq pseudogene 2857 3815 . - . ID=gene-AC57_RS22955;Name=AC57_RS22955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS22955;old_locus_tag=AC57_0009;pseudo=true NZ_JJLR01000004.1 Protein Homology CDS 2857 3815 . - 0 ID=cds-AC57_RS22955;Parent=gene-AC57_RS22955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AC57_RS22955;product=fimbrial family protein;pseudo=true;transl_table=11 NZ_JJLR01000004.1 RefSeq pseudogene 3828 5159 . - . ID=gene-AC57_RS22950;Name=AC57_RS22950;end_range=5159,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS22950;old_locus_tag=AC57_0010;partial=true;pseudo=true NZ_JJLR01000004.1 Protein Homology CDS 3828 5159 . - 0 ID=cds-AC57_RS22950;Parent=gene-AC57_RS22950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=5159,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308049.1;locus_tag=AC57_RS22950;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JJLR01000004.1 RefSeq pseudogene 5406 6826 . - . ID=gene-AC57_RS22945;Name=espX1;gbkey=Gene;gene=espX1;gene_biotype=pseudogene;locus_tag=AC57_RS22945;old_locus_tag=AC57_0011;pseudo=true NZ_JJLR01000004.1 Protein Homology CDS 5406 6826 . - 0 ID=cds-AC57_RS22945;Parent=gene-AC57_RS22945;Note=frameshifted;gbkey=CDS;gene=espX1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308052.1;locus_tag=AC57_RS22945;product=type III secretion system effector EspX1;pseudo=true;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 7309 7572 . - . ID=gene-AC57_RS0123015;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AC57_RS0123015;old_locus_tag=AC57_0013 NZ_JJLR01000004.1 Protein Homology CDS 7309 7572 . - 0 ID=cds-WP_001274021.1;Parent=gene-AC57_RS0123015;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AC57_RS0123015;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 7675 7893 . + . ID=gene-AC57_RS0123020;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AC57_RS0123020 NZ_JJLR01000004.1 Protein Homology CDS 7675 7893 . + 0 ID=cds-WP_001300728.1;Parent=gene-AC57_RS0123020;Dbxref=GenBank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AC57_RS0123020;product=DUF2575 family protein;protein_id=WP_001300728.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 7901 8842 . + . ID=gene-AC57_RS22940;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AC57_RS22940;old_locus_tag=AC57_0014 NZ_JJLR01000004.1 Protein Homology CDS 7901 8842 . + 0 ID=cds-WP_000767329.1;Parent=gene-AC57_RS22940;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AC57_RS22940;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 8885 11701 . + . ID=gene-AC57_RS22935;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AC57_RS22935;old_locus_tag=AC57_0015 NZ_JJLR01000004.1 Protein Homology CDS 8885 11701 . + 0 ID=cds-WP_001286865.1;Parent=gene-AC57_RS22935;Dbxref=GenBank:WP_001286865.1;Name=WP_001286865.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AC57_RS22935;product=isoleucine--tRNA ligase;protein_id=WP_001286865.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 11701 12195 . + . ID=gene-AC57_RS22930;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AC57_RS22930;old_locus_tag=AC57_0016 NZ_JJLR01000004.1 Protein Homology CDS 11701 12195 . + 0 ID=cds-WP_000083369.1;Parent=gene-AC57_RS22930;Dbxref=GenBank:WP_000083369.1;Name=WP_000083369.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AC57_RS22930;product=signal peptidase II;protein_id=WP_000083369.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 12320 12769 . + . ID=gene-AC57_RS22925;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AC57_RS22925;old_locus_tag=AC57_0017 NZ_JJLR01000004.1 Protein Homology CDS 12320 12769 . + 0 ID=cds-WP_000004655.1;Parent=gene-AC57_RS22925;Dbxref=GenBank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AC57_RS22925;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 12771 13721 . + . ID=gene-AC57_RS22920;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AC57_RS22920;old_locus_tag=AC57_0018 NZ_JJLR01000004.1 Protein Homology CDS 12771 13721 . + 0 ID=cds-WP_001166395.1;Parent=gene-AC57_RS22920;Dbxref=GenBank:WP_001166395.1;Name=WP_001166395.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AC57_RS22920;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 13787 14701 . + . ID=gene-AC57_RS22915;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AC57_RS22915;old_locus_tag=AC57_0019 NZ_JJLR01000004.1 Protein Homology CDS 13787 14701 . + 0 ID=cds-WP_001239142.1;Parent=gene-AC57_RS22915;Dbxref=GenBank:WP_001239142.1;Name=WP_001239142.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414571.1;locus_tag=AC57_RS22915;product=ribonucleoside hydrolase RihC;protein_id=WP_001239142.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 14868 15689 . + . ID=gene-AC57_RS22910;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AC57_RS22910;old_locus_tag=AC57_0020 NZ_JJLR01000004.1 Protein Homology CDS 14868 15689 . + 0 ID=cds-WP_000543604.1;Parent=gene-AC57_RS22910;Dbxref=GenBank:WP_000543604.1;Name=WP_000543604.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AC57_RS22910;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_000543604.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 16145 17293 . + . ID=gene-AC57_RS22905;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AC57_RS22905;old_locus_tag=AC57_0022 NZ_JJLR01000004.1 Protein Homology CDS 16145 17293 . + 0 ID=cds-WP_001351917.1;Parent=gene-AC57_RS22905;Dbxref=GenBank:WP_001351917.1;Name=WP_001351917.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AC57_RS22905;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_001351917.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 17311 20532 . + . ID=gene-AC57_RS22900;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AC57_RS22900;old_locus_tag=AC57_0023 NZ_JJLR01000004.1 Protein Homology CDS 17311 20532 . + 0 ID=cds-WP_001126349.1;Parent=gene-AC57_RS22900;Dbxref=GenBank:WP_001126349.1;Name=WP_001126349.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308063.1;locus_tag=AC57_RS22900;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126349.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 20794 21189 . + . ID=gene-AC57_RS22890;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AC57_RS22890;old_locus_tag=AC57_0025 NZ_JJLR01000004.1 Protein Homology CDS 20794 21189 . + 0 ID=cds-WP_000333125.1;Parent=gene-AC57_RS22890;Dbxref=GenBank:WP_000333125.1;Name=WP_000333125.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AC57_RS22890;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333125.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 21398 21988 . - . ID=gene-AC57_RS22885;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AC57_RS22885;old_locus_tag=AC57_0026 NZ_JJLR01000004.1 Protein Homology CDS 21398 21988 . - 0 ID=cds-WP_000122886.1;Parent=gene-AC57_RS22885;Dbxref=GenBank:WP_000122886.1;Name=WP_000122886.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308065.2;locus_tag=AC57_RS22885;product=carnitine operon protein CaiE;protein_id=WP_000122886.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 21994 22779 . - . ID=gene-AC57_RS22880;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AC57_RS22880;old_locus_tag=AC57_0027 NZ_JJLR01000004.1 Protein Homology CDS 21994 22779 . - 0 ID=cds-WP_001295419.1;Parent=gene-AC57_RS22880;Dbxref=GenBank:WP_001295419.1;Name=WP_001295419.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AC57_RS22880;product=crotonobetainyl-CoA hydratase;protein_id=WP_001295419.1;transl_table=11 NZ_JJLR01000004.1 RefSeq gene 22957 23182 . + . ID=gene-AC57_RS26295;Name=AC57_RS26295;end_range=23182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26295;old_locus_tag=AC57_0028;partial=true NZ_JJLR01000004.1 Protein Homology CDS 22957 23182 . + 0 ID=cds-WP_001482752.1;Parent=gene-AC57_RS26295;Dbxref=GenBank:WP_001482752.1;Name=WP_001482752.1;Ontology_term=GO:0006313;end_range=23182,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26295;partial=true;product=IS1 family transposase;protein_id=WP_001482752.1;transl_table=11 ##sequence-region NZ_JJLR01000005.1 1 37726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000005.1 RefSeq region 1 37726 . + . ID=NZ_JJLR01000005.1:1..37726;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000005.1 RefSeq gene 1 280 . + . ID=gene-AC57_RS22875;Name=AC57_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22875;old_locus_tag=AC57_0029;partial=true;start_range=.,1 NZ_JJLR01000005.1 Protein Homology CDS 1 280 . + 1 ID=cds-WP_005129930.1;Parent=gene-AC57_RS22875;Dbxref=GenBank:WP_005129930.1;Name=WP_005129930.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS22875;partial=true;product=IS1 family transposase;protein_id=WP_005129930.1;start_range=.,1;transl_table=11 NZ_JJLR01000005.1 RefSeq pseudogene 296 1543 . + . ID=gene-AC57_RS22870;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=pseudogene;locus_tag=AC57_RS22870;old_locus_tag=AC57_0030;partial=true;pseudo=true;start_range=.,296 NZ_JJLR01000005.1 Protein Homology CDS 296 1543 . + 0 ID=cds-AC57_RS22870;Parent=gene-AC57_RS22870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AC57_RS22870;partial=true;product=MFS transporter;pseudo=true;start_range=.,296;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 1651 2181 . + . ID=gene-AC57_RS22865;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AC57_RS22865;old_locus_tag=AC57_0031 NZ_JJLR01000005.1 Protein Homology CDS 1651 2181 . + 0 ID=cds-WP_000600725.1;Parent=gene-AC57_RS22865;Dbxref=GenBank:WP_000600725.1;Name=WP_000600725.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414588.1;locus_tag=AC57_RS22865;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600725.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 2174 4036 . + . ID=gene-AC57_RS22860;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AC57_RS22860;old_locus_tag=AC57_0032 NZ_JJLR01000005.1 Protein Homology CDS 2174 4036 . + 0 ID=cds-WP_032279827.1;Parent=gene-AC57_RS22860;Dbxref=GenBank:WP_032279827.1;Name=WP_032279827.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414589.1;locus_tag=AC57_RS22860;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_032279827.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 4228 4707 . + . ID=gene-AC57_RS22855;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AC57_RS22855;old_locus_tag=AC57_0033 NZ_JJLR01000005.1 Protein Homology CDS 4228 4707 . + 0 ID=cds-WP_000624375.1;Parent=gene-AC57_RS22855;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AC57_RS22855;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 4785 5627 . - . ID=gene-AC57_RS22850;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AC57_RS22850;old_locus_tag=AC57_0034 NZ_JJLR01000005.1 Protein Homology CDS 4785 5627 . - 0 ID=cds-WP_000257192.1;Parent=gene-AC57_RS22850;Dbxref=GenBank:WP_000257192.1;Name=WP_000257192.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414591.1;locus_tag=AC57_RS22850;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257192.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 5634 6011 . - . ID=gene-AC57_RS22845;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AC57_RS22845;old_locus_tag=AC57_0035 NZ_JJLR01000005.1 Protein Homology CDS 5634 6011 . - 0 ID=cds-WP_000610901.1;Parent=gene-AC57_RS22845;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AC57_RS22845;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 6014 6835 . - . ID=gene-AC57_RS22840;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AC57_RS22840;old_locus_tag=AC57_0036 NZ_JJLR01000005.1 Protein Homology CDS 6014 6835 . - 0 ID=cds-WP_001065381.1;Parent=gene-AC57_RS22840;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AC57_RS22840;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 6832 7821 . - . ID=gene-AC57_RS22835;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AC57_RS22835;old_locus_tag=AC57_0037 NZ_JJLR01000005.1 Protein Homology CDS 6832 7821 . - 0 ID=cds-WP_000241277.1;Parent=gene-AC57_RS22835;Dbxref=GenBank:WP_000241277.1;Name=WP_000241277.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414594.1;locus_tag=AC57_RS22835;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_000241277.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 7821 9107 . - . ID=gene-AC57_RS22830;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AC57_RS22830;old_locus_tag=AC57_0038 NZ_JJLR01000005.1 Protein Homology CDS 7821 9107 . - 0 ID=cds-WP_000800457.1;Parent=gene-AC57_RS22830;Dbxref=GenBank:WP_000800457.1;Name=WP_000800457.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AC57_RS22830;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 9160 11514 . - . ID=gene-AC57_RS22825;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AC57_RS22825;old_locus_tag=AC57_0039 NZ_JJLR01000005.1 Protein Homology CDS 9160 11514 . - 0 ID=cds-WP_000746151.1;Parent=gene-AC57_RS22825;Dbxref=GenBank:WP_000746151.1;Name=WP_000746151.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AC57_RS22825;product=LPS assembly protein LptD;protein_id=WP_000746151.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 11769 12584 . + . ID=gene-AC57_RS22820;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AC57_RS22820;old_locus_tag=AC57_0040 NZ_JJLR01000005.1 Protein Homology CDS 11769 12584 . + 0 ID=cds-WP_001200579.1;Parent=gene-AC57_RS22820;Dbxref=GenBank:WP_001200579.1;Name=WP_001200579.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414597.1;locus_tag=AC57_RS22820;product=co-chaperone DjlA;protein_id=WP_001200579.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 12701 13360 . - . ID=gene-AC57_RS22815;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AC57_RS22815;old_locus_tag=AC57_0041 NZ_JJLR01000005.1 Protein Homology CDS 12701 13360 . - 0 ID=cds-WP_000525176.1;Parent=gene-AC57_RS22815;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AC57_RS22815;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 13372 16278 . - . ID=gene-AC57_RS22810;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AC57_RS22810;old_locus_tag=AC57_0042 NZ_JJLR01000005.1 Protein Homology CDS 13372 16278 . - 0 ID=cds-WP_001117011.1;Parent=gene-AC57_RS22810;Dbxref=GenBank:WP_001117011.1;Name=WP_001117011.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AC57_RS22810;product=RNA polymerase-associated protein RapA;protein_id=WP_001117011.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 16443 18794 . - . ID=gene-AC57_RS22805;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AC57_RS22805;old_locus_tag=AC57_0043 NZ_JJLR01000005.1 Protein Homology CDS 16443 18794 . - 0 ID=cds-WP_032285617.1;Parent=gene-AC57_RS22805;Dbxref=GenBank:WP_032285617.1;Name=WP_032285617.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308091.1;locus_tag=AC57_RS22805;product=DNA polymerase II;protein_id=WP_032285617.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 18869 19564 . - . ID=gene-AC57_RS22800;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AC57_RS22800;old_locus_tag=AC57_0044 NZ_JJLR01000005.1 Protein Homology CDS 18869 19564 . - 0 ID=cds-WP_032237574.1;Parent=gene-AC57_RS22800;Dbxref=GenBank:WP_032237574.1;Name=WP_032237574.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=AC57_RS22800;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_032237574.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 20104 21606 . - . ID=gene-AC57_RS22795;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AC57_RS22795;old_locus_tag=AC57_0045 NZ_JJLR01000005.1 Protein Homology CDS 20104 21606 . - 0 ID=cds-WP_000151741.1;Parent=gene-AC57_RS22795;Dbxref=GenBank:WP_000151741.1;Name=WP_000151741.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AC57_RS22795;product=L-arabinose isomerase;protein_id=WP_000151741.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 21617 23317 . - . ID=gene-AC57_RS22790;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AC57_RS22790;old_locus_tag=AC57_0046 NZ_JJLR01000005.1 Protein Homology CDS 21617 23317 . - 0 ID=cds-WP_032237572.1;Parent=gene-AC57_RS22790;Dbxref=GenBank:WP_032237572.1;Name=WP_032237572.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414605.1;locus_tag=AC57_RS22790;product=ribulokinase;protein_id=WP_032237572.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 23656 24534 . + . ID=gene-AC57_RS22785;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AC57_RS22785;old_locus_tag=AC57_0047 NZ_JJLR01000005.1 Protein Homology CDS 23656 24534 . + 0 ID=cds-WP_001300811.1;Parent=gene-AC57_RS22785;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AC57_RS22785;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 24620 25384 . + . ID=gene-AC57_RS22780;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=AC57_RS22780;old_locus_tag=AC57_0048 NZ_JJLR01000005.1 Protein Homology CDS 24620 25384 . + 0 ID=cds-WP_032261041.1;Parent=gene-AC57_RS22780;Dbxref=GenBank:WP_032261041.1;Name=WP_032261041.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706018.1;locus_tag=AC57_RS22780;product=DedA family protein;protein_id=WP_032261041.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 25498 26196 . - . ID=gene-AC57_RS22775;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AC57_RS22775;old_locus_tag=AC57_0049 NZ_JJLR01000005.1 Protein Homology CDS 25498 26196 . - 0 ID=cds-WP_000916291.1;Parent=gene-AC57_RS22775;Dbxref=GenBank:WP_000916291.1;Name=WP_000916291.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308097.1;locus_tag=AC57_RS22775;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_000916291.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 26180 27790 . - . ID=gene-AC57_RS22770;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AC57_RS22770;old_locus_tag=AC57_0050 NZ_JJLR01000005.1 Protein Homology CDS 26180 27790 . - 0 ID=cds-WP_000235688.1;Parent=gene-AC57_RS22770;Dbxref=GenBank:WP_000235688.1;Name=WP_000235688.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706020.1;locus_tag=AC57_RS22770;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_000235688.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 27766 28749 . - . ID=gene-AC57_RS22765;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AC57_RS22765;old_locus_tag=AC57_0051 NZ_JJLR01000005.1 Protein Homology CDS 27766 28749 . - 0 ID=cds-WP_032285618.1;Parent=gene-AC57_RS22765;Dbxref=GenBank:WP_032285618.1;Name=WP_032285618.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=AC57_RS22765;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_032285618.1;transl_table=11 NZ_JJLR01000005.1 cmsearch riboswitch 28780 28879 . - . ID=id-NZ_JJLR01000005.1:28780..28879;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLR01000005.1 RefSeq gene 28913 30568 . - . ID=gene-AC57_RS22760;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AC57_RS22760;old_locus_tag=AC57_0053 NZ_JJLR01000005.1 Protein Homology CDS 28913 30568 . - 0 ID=cds-WP_001300637.1;Parent=gene-AC57_RS22760;Dbxref=GenBank:WP_001300637.1;Name=WP_001300637.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414611.1;locus_tag=AC57_RS22760;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_001300637.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 30657 30788 . + . ID=gene-AC57_RS22755;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AC57_RS22755;old_locus_tag=AC57_0054 NZ_JJLR01000005.1 Protein Homology CDS 30657 30788 . + 0 ID=cds-WP_001248770.1;Parent=gene-AC57_RS22755;Dbxref=GenBank:WP_001248770.1;Name=WP_001248770.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791237.1;locus_tag=AC57_RS22755;product=glucose uptake inhibitor SgrT;protein_id=WP_001248770.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 30890 32068 . + . ID=gene-AC57_RS22750;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;locus_tag=AC57_RS22750;old_locus_tag=AC57_0055 NZ_JJLR01000005.1 Protein Homology CDS 30890 32068 . + 0 ID=cds-WP_032285619.1;Parent=gene-AC57_RS22750;Dbxref=GenBank:WP_032285619.1;Name=WP_032285619.1;gbkey=CDS;gene=setA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025293.1;locus_tag=AC57_RS22750;product=sugar efflux transporter SetA;protein_id=WP_032285619.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 32117 32722 . - . ID=gene-AC57_RS22745;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AC57_RS22745;old_locus_tag=AC57_0056 NZ_JJLR01000005.1 Protein Homology CDS 32117 32722 . - 0 ID=cds-WP_000818228.1;Parent=gene-AC57_RS22745;Dbxref=GenBank:WP_000818228.1;Name=WP_000818228.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414613.1;locus_tag=AC57_RS22745;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_000818228.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 32733 34133 . - . ID=gene-AC57_RS22740;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AC57_RS22740;old_locus_tag=AC57_0057 NZ_JJLR01000005.1 Protein Homology CDS 32733 34133 . - 0 ID=cds-WP_001140652.1;Parent=gene-AC57_RS22740;Dbxref=GenBank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AC57_RS22740;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 34136 35227 . - . ID=gene-AC57_RS22735;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AC57_RS22735;old_locus_tag=AC57_0058 NZ_JJLR01000005.1 Protein Homology CDS 34136 35227 . - 0 ID=cds-WP_000042353.1;Parent=gene-AC57_RS22735;Dbxref=GenBank:WP_000042353.1;Name=WP_000042353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AC57_RS22735;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042353.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 35227 36798 . - . ID=gene-AC57_RS22730;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AC57_RS22730;old_locus_tag=AC57_0059 NZ_JJLR01000005.1 Protein Homology CDS 35227 36798 . - 0 ID=cds-WP_000082846.1;Parent=gene-AC57_RS22730;Dbxref=GenBank:WP_000082846.1;Name=WP_000082846.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AC57_RS22730;product=2-isopropylmalate synthase;protein_id=WP_000082846.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 36891 36977 . - . ID=gene-AC57_RS0123035;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AC57_RS0123035 NZ_JJLR01000005.1 Protein Homology CDS 36891 36977 . - 0 ID=cds-WP_001300467.1;Parent=gene-AC57_RS0123035;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AC57_RS0123035;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JJLR01000005.1 RefSeq gene 37498 37726 . - . ID=gene-AC57_RS22725;Name=AC57_RS22725;end_range=37726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22725;old_locus_tag=AC57_0060;partial=true NZ_JJLR01000005.1 Protein Homology CDS 37498 37726 . - 1 ID=cds-WP_001395900.1;Parent=gene-AC57_RS22725;Dbxref=GenBank:WP_001395900.1;Name=WP_001395900.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=37726,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS22725;partial=true;product=IS1 family transposase;protein_id=WP_001395900.1;transl_table=11 ##sequence-region NZ_JJLR01000006.1 1 3170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000006.1 RefSeq region 1 3170 . + . ID=NZ_JJLR01000006.1:1..3170;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000006.1 RefSeq gene 71 1579 . - . ID=gene-AC57_RS22720;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AC57_RS22720;old_locus_tag=AC57_0061 NZ_JJLR01000006.1 Protein Homology CDS 71 1579 . - 0 ID=cds-WP_001189111.1;Parent=gene-AC57_RS22720;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS22720;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 NZ_JJLR01000006.1 RefSeq pseudogene 2252 2680 . - . ID=gene-AC57_RS28540;Name=AC57_RS28540;end_range=2680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28540;partial=true;pseudo=true;start_range=.,2252 NZ_JJLR01000006.1 Protein Homology CDS 2252 2680 . - 0 ID=cds-AC57_RS28540;Parent=gene-AC57_RS28540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=AC57_RS28540;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2252;transl_table=11 NZ_JJLR01000006.1 RefSeq gene 2745 3170 . + . ID=gene-AC57_RS22715;Name=AC57_RS22715;end_range=3170,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22715;old_locus_tag=AC57_0063;partial=true NZ_JJLR01000006.1 Protein Homology CDS 2745 3170 . + 0 ID=cds-WP_032278442.1;Parent=gene-AC57_RS22715;Dbxref=GenBank:WP_032278442.1;Name=WP_032278442.1;end_range=3170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AC57_RS22715;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_032278442.1;transl_table=11 ##sequence-region NZ_JJLR01000007.1 1 138459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000007.1 RefSeq region 1 138459 . + . ID=NZ_JJLR01000007.1:1..138459;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000007.1 RefSeq pseudogene 1 480 . - . ID=gene-AC57_RS28550;Name=AC57_RS28550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28550;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000007.1 Protein Homology CDS 1 480 . - 0 ID=cds-AC57_RS28550;Parent=gene-AC57_RS28550;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS28550;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000007.1 RefSeq pseudogene 535 648 . + . ID=gene-AC57_RS28555;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=pseudogene;locus_tag=AC57_RS28555;partial=true;pseudo=true;start_range=.,535 NZ_JJLR01000007.1 Protein Homology CDS 535 648 . + 0 ID=cds-AC57_RS28555;Parent=gene-AC57_RS28555;Note=activator for leuABCD operon%3B member of LysR family of transcriptional activators%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=leuO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AC57_RS28555;partial=true;product=transcriptional regulator LeuO;pseudo=true;start_range=.,535;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 803 847 . - . ID=gene-AC57_RS29540;Name=AC57_RS29540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29540 NZ_JJLR01000007.1 Protein Homology CDS 803 847 . - 0 ID=cds-WP_120795371.1;Parent=gene-AC57_RS29540;Dbxref=GenBank:WP_120795371.1;Name=WP_120795371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AC57_RS29540;product=protein YabR;protein_id=WP_120795371.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 966 2690 . + . ID=gene-AC57_RS22705;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AC57_RS22705;old_locus_tag=AC57_0067 NZ_JJLR01000007.1 Protein Homology CDS 966 2690 . + 0 ID=cds-WP_001295534.1;Parent=gene-AC57_RS22705;Dbxref=GenBank:WP_001295534.1;Name=WP_001295534.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AC57_RS22705;product=acetolactate synthase 3 large subunit;protein_id=WP_001295534.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 2693 3184 . + . ID=gene-AC57_RS22700;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AC57_RS22700;old_locus_tag=AC57_0068 NZ_JJLR01000007.1 Protein Homology CDS 2693 3184 . + 0 ID=cds-WP_001300383.1;Parent=gene-AC57_RS22700;Dbxref=GenBank:WP_001300383.1;Name=WP_001300383.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AC57_RS22700;product=acetolactate synthase small subunit;protein_id=WP_001300383.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 3196 3282 . + . ID=gene-AC57_RS0123045;Name=AC57_RS0123045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123045 NZ_JJLR01000007.1 Protein Homology CDS 3196 3282 . + 0 ID=cds-WP_001303787.1;Parent=gene-AC57_RS0123045;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AC57_RS0123045;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 3364 4368 . + . ID=gene-AC57_RS22695;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AC57_RS22695;old_locus_tag=AC57_0069 NZ_JJLR01000007.1 Protein Homology CDS 3364 4368 . + 0 ID=cds-WP_000762397.1;Parent=gene-AC57_RS22695;Dbxref=GenBank:WP_000762397.1;Name=WP_000762397.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AC57_RS22695;product=catabolite repressor/activator;protein_id=WP_000762397.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 4970 5428 . + . ID=gene-AC57_RS22690;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AC57_RS22690;old_locus_tag=AC57_0071 NZ_JJLR01000007.1 Protein Homology CDS 4970 5428 . + 0 ID=cds-WP_001295533.1;Parent=gene-AC57_RS22690;Dbxref=GenBank:WP_001295533.1;Name=WP_001295533.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AC57_RS22690;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295533.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 5430 6371 . + . ID=gene-AC57_RS22685;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AC57_RS22685;old_locus_tag=AC57_0072 NZ_JJLR01000007.1 Protein Homology CDS 5430 6371 . + 0 ID=cds-WP_000970479.1;Parent=gene-AC57_RS22685;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AC57_RS22685;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 6368 6733 . + . ID=gene-AC57_RS22680;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AC57_RS22680;old_locus_tag=AC57_0073 NZ_JJLR01000007.1 Protein Homology CDS 6368 6733 . + 0 ID=cds-WP_000625658.1;Parent=gene-AC57_RS22680;Dbxref=GenBank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AC57_RS22680;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 6749 8515 . + . ID=gene-AC57_RS22675;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AC57_RS22675;old_locus_tag=AC57_0074 NZ_JJLR01000007.1 Protein Homology CDS 6749 8515 . + 0 ID=cds-WP_000642196.1;Parent=gene-AC57_RS22675;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AC57_RS22675;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 8502 9989 . + . ID=gene-AC57_RS22670;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AC57_RS22670;old_locus_tag=AC57_0075 NZ_JJLR01000007.1 Protein Homology CDS 8502 9989 . + 0 ID=cds-WP_001399887.1;Parent=gene-AC57_RS22670;Dbxref=GenBank:WP_001399887.1;Name=WP_001399887.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308116.1;locus_tag=AC57_RS22670;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_001399887.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 9986 11344 . + . ID=gene-AC57_RS22665;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AC57_RS22665;old_locus_tag=AC57_0076 NZ_JJLR01000007.1 Protein Homology CDS 9986 11344 . + 0 ID=cds-WP_000626688.1;Parent=gene-AC57_RS22665;Dbxref=GenBank:WP_000626688.1;Name=WP_000626688.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=AC57_RS22665;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_000626688.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 11338 12420 . + . ID=gene-AC57_RS22660;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AC57_RS22660;old_locus_tag=AC57_0077 NZ_JJLR01000007.1 Protein Homology CDS 11338 12420 . + 0 ID=cds-WP_000964131.1;Parent=gene-AC57_RS22660;Dbxref=GenBank:WP_000964131.1;Name=WP_000964131.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AC57_RS22660;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964131.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 12423 13739 . + . ID=gene-AC57_RS22655;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AC57_RS22655;old_locus_tag=AC57_0078 NZ_JJLR01000007.1 Protein Homology CDS 12423 13739 . + 0 ID=cds-WP_000796481.1;Parent=gene-AC57_RS22655;Dbxref=GenBank:WP_000796481.1;Name=WP_000796481.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AC57_RS22655;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796481.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 13739 14983 . + . ID=gene-AC57_RS22650;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AC57_RS22650;old_locus_tag=AC57_0079 NZ_JJLR01000007.1 Protein Homology CDS 13739 14983 . + 0 ID=cds-WP_001295532.1;Parent=gene-AC57_RS22650;Dbxref=GenBank:WP_001295532.1;Name=WP_001295532.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AC57_RS22650;product=cell division protein FtsW;protein_id=WP_001295532.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 14980 16047 . + . ID=gene-AC57_RS22645;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AC57_RS22645;old_locus_tag=AC57_0080 NZ_JJLR01000007.1 Protein Homology CDS 14980 16047 . + 0 ID=cds-WP_001514908.1;Parent=gene-AC57_RS22645;Dbxref=GenBank:WP_001514908.1;Name=WP_001514908.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414632.1;locus_tag=AC57_RS22645;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_001514908.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 16101 17576 . + . ID=gene-AC57_RS22640;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AC57_RS22640;old_locus_tag=AC57_0081 NZ_JJLR01000007.1 Protein Homology CDS 16101 17576 . + 0 ID=cds-WP_001096050.1;Parent=gene-AC57_RS22640;Dbxref=GenBank:WP_001096050.1;Name=WP_001096050.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414633.1;locus_tag=AC57_RS22640;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096050.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 17569 18489 . + . ID=gene-AC57_RS22635;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AC57_RS22635;old_locus_tag=AC57_0082 NZ_JJLR01000007.1 Protein Homology CDS 17569 18489 . + 0 ID=cds-WP_000130056.1;Parent=gene-AC57_RS22635;Dbxref=GenBank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AC57_RS22635;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 18491 19321 . + . ID=gene-AC57_RS22630;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AC57_RS22630;old_locus_tag=AC57_0083 NZ_JJLR01000007.1 Protein Homology CDS 18491 19321 . + 0 ID=cds-WP_000075744.1;Parent=gene-AC57_RS22630;Dbxref=GenBank:WP_000075744.1;Name=WP_000075744.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308124.1;locus_tag=AC57_RS22630;product=cell division protein FtsQ;protein_id=WP_000075744.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 19318 20580 . + . ID=gene-AC57_RS22625;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AC57_RS22625;old_locus_tag=AC57_0084 NZ_JJLR01000007.1 Protein Homology CDS 19318 20580 . + 0 ID=cds-WP_000588474.1;Parent=gene-AC57_RS22625;Dbxref=GenBank:WP_000588474.1;Name=WP_000588474.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AC57_RS22625;product=cell division protein FtsA;protein_id=WP_000588474.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 20641 21792 . + . ID=gene-AC57_RS22620;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AC57_RS22620;old_locus_tag=AC57_0085 NZ_JJLR01000007.1 Protein Homology CDS 20641 21792 . + 0 ID=cds-WP_000462775.1;Parent=gene-AC57_RS22620;Dbxref=GenBank:WP_000462775.1;Name=WP_000462775.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AC57_RS22620;product=cell division protein FtsZ;protein_id=WP_000462775.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 21893 22810 . + . ID=gene-AC57_RS22615;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AC57_RS22615;old_locus_tag=AC57_0086 NZ_JJLR01000007.1 Protein Homology CDS 21893 22810 . + 0 ID=cds-WP_000595482.1;Parent=gene-AC57_RS22615;Dbxref=GenBank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AC57_RS22615;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 23041 23553 . + . ID=gene-AC57_RS22610;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AC57_RS22610;old_locus_tag=AC57_0087 NZ_JJLR01000007.1 Protein Homology CDS 23041 23553 . + 0 ID=cds-WP_000014320.1;Parent=gene-AC57_RS22610;Dbxref=GenBank:WP_000014320.1;Name=WP_000014320.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=AC57_RS22610;product=secA translation cis-regulator SecM;protein_id=WP_000014320.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 23615 26320 . + . ID=gene-AC57_RS22605;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AC57_RS22605;old_locus_tag=AC57_0088 NZ_JJLR01000007.1 Protein Homology CDS 23615 26320 . + 0 ID=cds-WP_000905780.1;Parent=gene-AC57_RS22605;Dbxref=GenBank:WP_000905780.1;Name=WP_000905780.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AC57_RS22605;product=preprotein translocase subunit SecA;protein_id=WP_000905780.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 26380 26769 . + . ID=gene-AC57_RS22600;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AC57_RS22600;old_locus_tag=AC57_0089 NZ_JJLR01000007.1 Protein Homology CDS 26380 26769 . + 0 ID=cds-WP_032279438.1;Parent=gene-AC57_RS22600;Dbxref=GenBank:WP_032279438.1;Name=WP_032279438.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AC57_RS22600;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_032279438.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 26985 27182 . - . ID=gene-AC57_RS22595;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AC57_RS22595;old_locus_tag=AC57_0090 NZ_JJLR01000007.1 Protein Homology CDS 26985 27182 . - 0 ID=cds-WP_000005042.1;Parent=gene-AC57_RS22595;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AC57_RS22595;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 27192 27935 . - . ID=gene-AC57_RS22590;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AC57_RS22590;old_locus_tag=AC57_0091 NZ_JJLR01000007.1 Protein Homology CDS 27192 27935 . - 0 ID=cds-WP_001194722.1;Parent=gene-AC57_RS22590;Dbxref=GenBank:WP_001194722.1;Name=WP_001194722.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AC57_RS22590;product=cell division protein ZapD;protein_id=WP_001194722.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 27935 28555 . - . ID=gene-AC57_RS22585;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AC57_RS22585;old_locus_tag=AC57_0092 NZ_JJLR01000007.1 Protein Homology CDS 27935 28555 . - 0 ID=cds-WP_001269527.1;Parent=gene-AC57_RS22585;Dbxref=GenBank:WP_001269527.1;Name=WP_001269527.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AC57_RS22585;product=dephospho-CoA kinase;protein_id=WP_001269527.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 28580 28624 . + . ID=gene-AC57_RS30145;Name=AC57_RS30145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30145 NZ_JJLR01000007.1 Protein Homology CDS 28580 28624 . + 0 ID=cds-WP_120795372.1;Parent=gene-AC57_RS30145;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AC57_RS30145;product=protein YacM;protein_id=WP_120795372.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 28780 29823 . + . ID=gene-AC57_RS22580;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AC57_RS22580;old_locus_tag=AC57_0093 NZ_JJLR01000007.1 Protein Homology CDS 28780 29823 . + 0 ID=cds-WP_001217338.1;Parent=gene-AC57_RS22580;Dbxref=GenBank:WP_001217338.1;Name=WP_001217338.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AC57_RS22580;product=GMP reductase;protein_id=WP_001217338.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 29858 31060 . - . ID=gene-AC57_RS22575;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AC57_RS22575;old_locus_tag=AC57_0094 NZ_JJLR01000007.1 Protein Homology CDS 29858 31060 . - 0 ID=cds-WP_000157262.1;Parent=gene-AC57_RS22575;Dbxref=GenBank:WP_000157262.1;Name=WP_000157262.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706061.1;locus_tag=AC57_RS22575;product=protein transport protein HofC;protein_id=WP_000157262.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 31050 32435 . - . ID=gene-AC57_RS22570;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AC57_RS22570;old_locus_tag=AC57_0095 NZ_JJLR01000007.1 Protein Homology CDS 31050 32435 . - 0 ID=cds-WP_032237004.1;Parent=gene-AC57_RS22570;Dbxref=GenBank:WP_032237004.1;Name=WP_032237004.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414649.1;locus_tag=AC57_RS22570;product=type II secretion system protein GspE;protein_id=WP_032237004.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 32445 32885 . - . ID=gene-AC57_RS22565;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AC57_RS22565;old_locus_tag=AC57_0096 NZ_JJLR01000007.1 Protein Homology CDS 32445 32885 . - 0 ID=cds-WP_000360904.1;Parent=gene-AC57_RS22565;Dbxref=GenBank:WP_000360904.1;Name=WP_000360904.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AC57_RS22565;product=prepilin peptidase-dependent pilin;protein_id=WP_000360904.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 33088 33981 . - . ID=gene-AC57_RS22560;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AC57_RS22560;old_locus_tag=AC57_0097 NZ_JJLR01000007.1 Protein Homology CDS 33088 33981 . - 0 ID=cds-WP_001135174.1;Parent=gene-AC57_RS22560;Dbxref=GenBank:WP_001135174.1;Name=WP_001135174.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414651.1;locus_tag=AC57_RS22560;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135174.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 34069 34620 . + . ID=gene-AC57_RS22555;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AC57_RS22555;old_locus_tag=AC57_0098 NZ_JJLR01000007.1 Protein Homology CDS 34069 34620 . + 0 ID=cds-WP_000923721.1;Parent=gene-AC57_RS22555;Dbxref=GenBank:WP_000923721.1;Name=WP_000923721.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414652.1;locus_tag=AC57_RS22555;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923721.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 34617 35471 . + . ID=gene-AC57_RS22550;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AC57_RS22550;old_locus_tag=AC57_0099 NZ_JJLR01000007.1 Protein Homology CDS 34617 35471 . + 0 ID=cds-WP_001371446.1;Parent=gene-AC57_RS22550;Dbxref=GenBank:WP_001371446.1;Name=WP_001371446.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AC57_RS22550;product=beta-lactamase regulator AmpE;protein_id=WP_001371446.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 35514 36887 . - . ID=gene-AC57_RS22545;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AC57_RS22545;old_locus_tag=AC57_0100 NZ_JJLR01000007.1 Protein Homology CDS 35514 36887 . - 0 ID=cds-WP_000969915.1;Parent=gene-AC57_RS22545;Dbxref=GenBank:WP_000969915.1;Name=WP_000969915.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AC57_RS22545;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 37428 38192 . + . ID=gene-AC57_RS22540;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AC57_RS22540;old_locus_tag=AC57_0101 NZ_JJLR01000007.1 Protein Homology CDS 37428 38192 . + 0 ID=cds-WP_000331776.1;Parent=gene-AC57_RS22540;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AC57_RS22540;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 38353 41016 . + . ID=gene-AC57_RS22535;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AC57_RS22535;old_locus_tag=AC57_0102 NZ_JJLR01000007.1 Protein Homology CDS 38353 41016 . + 0 ID=cds-WP_032279437.1;Parent=gene-AC57_RS22535;Dbxref=GenBank:WP_032279437.1;Name=WP_032279437.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AC57_RS22535;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_032279437.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 41031 42923 . + . ID=gene-AC57_RS22530;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AC57_RS22530;old_locus_tag=AC57_0103 NZ_JJLR01000007.1 Protein Homology CDS 41031 42923 . + 0 ID=cds-WP_000963518.1;Parent=gene-AC57_RS22530;Dbxref=GenBank:WP_000963518.1;Name=WP_000963518.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414657.1;locus_tag=AC57_RS22530;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_000963518.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 43248 44672 . + . ID=gene-AC57_RS22525;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AC57_RS22525;old_locus_tag=AC57_0104 NZ_JJLR01000007.1 Protein Homology CDS 43248 44672 . + 0 ID=cds-WP_000102485.1;Parent=gene-AC57_RS22525;Dbxref=GenBank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AC57_RS22525;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 44743 46500 . - . ID=gene-AC57_RS22520;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;locus_tag=AC57_RS22520;old_locus_tag=AC57_0105 NZ_JJLR01000007.1 Protein Homology CDS 44743 46500 . - 0 ID=cds-WP_032237005.1;Parent=gene-AC57_RS22520;Dbxref=GenBank:WP_032237005.1;Name=WP_032237005.1;gbkey=CDS;gene=yacH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308148.1;locus_tag=AC57_RS22520;product=DUF3300 domain-containing protein;protein_id=WP_032237005.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 46855 49452 . + . ID=gene-AC57_RS22515;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AC57_RS22515;old_locus_tag=AC57_0106 NZ_JJLR01000007.1 Protein Homology CDS 46855 49452 . + 0 ID=cds-WP_001307570.1;Parent=gene-AC57_RS22515;Dbxref=GenBank:WP_001307570.1;Name=WP_001307570.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AC57_RS22515;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_001307570.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 49628 49990 . + . ID=gene-AC57_RS22510;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AC57_RS22510;old_locus_tag=AC57_0107 NZ_JJLR01000007.1 Protein Homology CDS 49628 49990 . + 0 ID=cds-WP_000384306.1;Parent=gene-AC57_RS22510;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AC57_RS22510;product=protein YacL;protein_id=WP_000384306.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 50028 50822 . - . ID=gene-AC57_RS22505;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AC57_RS22505;old_locus_tag=AC57_0108 NZ_JJLR01000007.1 Protein Homology CDS 50028 50822 . - 0 ID=cds-WP_000734287.1;Parent=gene-AC57_RS22505;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AC57_RS22505;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 50838 51704 . - . ID=gene-AC57_RS22500;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AC57_RS22500;old_locus_tag=AC57_0109 NZ_JJLR01000007.1 Protein Homology CDS 50838 51704 . - 0 ID=cds-WP_032237006.1;Parent=gene-AC57_RS22500;Dbxref=GenBank:WP_032237006.1;Name=WP_032237006.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414663.1;locus_tag=AC57_RS22500;product=polyamine aminopropyltransferase;protein_id=WP_032237006.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 51810 52157 . - . ID=gene-AC57_RS22495;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AC57_RS22495;old_locus_tag=AC57_0110 NZ_JJLR01000007.1 Protein Homology CDS 51810 52157 . - 0 ID=cds-WP_001295568.1;Parent=gene-AC57_RS22495;Dbxref=GenBank:WP_001295568.1;Name=WP_001295568.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AC57_RS22495;product=YacC family pilotin-like protein;protein_id=WP_001295568.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 52323 53873 . + . ID=gene-AC57_RS22490;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AC57_RS22490;old_locus_tag=AC57_0111 NZ_JJLR01000007.1 Protein Homology CDS 52323 53873 . + 0 ID=cds-WP_001189647.1;Parent=gene-AC57_RS22490;Dbxref=GenBank:WP_001189647.1;Name=WP_001189647.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414665.1;locus_tag=AC57_RS22490;product=multicopper oxidase CueO;protein_id=WP_001189647.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 54075 56465 . - . ID=gene-AC57_RS22485;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AC57_RS22485;old_locus_tag=AC57_0112 NZ_JJLR01000007.1 Protein Homology CDS 54075 56465 . - 0 ID=cds-WP_001297052.1;Parent=gene-AC57_RS22485;Dbxref=GenBank:WP_001297052.1;Name=WP_001297052.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308155.1;locus_tag=AC57_RS22485;product=quinoprotein glucose dehydrogenase;protein_id=WP_001297052.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 56671 57207 . + . ID=gene-AC57_RS22480;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AC57_RS22480;old_locus_tag=AC57_0113 NZ_JJLR01000007.1 Protein Homology CDS 56671 57207 . + 0 ID=cds-WP_000683335.1;Parent=gene-AC57_RS22480;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AC57_RS22480;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 57248 57910 . - . ID=gene-AC57_RS22475;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AC57_RS22475;old_locus_tag=AC57_0114 NZ_JJLR01000007.1 Protein Homology CDS 57248 57910 . - 0 ID=cds-WP_000651599.1;Parent=gene-AC57_RS22475;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AC57_RS22475;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 58019 58945 . + . ID=gene-AC57_RS22470;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AC57_RS22470;old_locus_tag=AC57_0115 NZ_JJLR01000007.1 Protein Homology CDS 58019 58945 . + 0 ID=cds-WP_032237007.1;Parent=gene-AC57_RS22470;Dbxref=GenBank:WP_032237007.1;Name=WP_032237007.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AC57_RS22470;product=ABC transporter ATP-binding protein;protein_id=WP_032237007.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 58942 59712 . + . ID=gene-AC57_RS22465;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AC57_RS22465;old_locus_tag=AC57_0116 NZ_JJLR01000007.1 Protein Homology CDS 58942 59712 . + 0 ID=cds-WP_000972203.1;Parent=gene-AC57_RS22465;Dbxref=GenBank:WP_000972203.1;Name=WP_000972203.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AC57_RS22465;product=ABC transporter permease;protein_id=WP_000972203.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 59817 60257 . + . ID=gene-AC57_RS22460;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AC57_RS22460;old_locus_tag=AC57_0117 NZ_JJLR01000007.1 Protein Homology CDS 59817 60257 . + 0 ID=cds-WP_000901987.1;Parent=gene-AC57_RS22460;Dbxref=GenBank:WP_000901987.1;Name=WP_000901987.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AC57_RS22460;product=PTS sugar transporter subunit IIA;protein_id=WP_000901987.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 60321 61550 . + . ID=gene-AC57_RS22455;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AC57_RS22455;old_locus_tag=AC57_0118 NZ_JJLR01000007.1 Protein Homology CDS 60321 61550 . + 0 ID=cds-WP_000277917.1;Parent=gene-AC57_RS22455;Dbxref=GenBank:WP_000277917.1;Name=WP_000277917.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AC57_RS22455;product=polysaccharide deacetylase family protein;protein_id=WP_000277917.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 61554 61934 . - . ID=gene-AC57_RS22450;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AC57_RS22450;old_locus_tag=AC57_0119 NZ_JJLR01000007.1 Protein Homology CDS 61554 61934 . - 0 ID=cds-WP_000621515.1;Parent=gene-AC57_RS22450;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AC57_RS22450;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 62208 63110 . + . ID=gene-AC57_RS22445;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AC57_RS22445;old_locus_tag=AC57_0121 NZ_JJLR01000007.1 Protein Homology CDS 62208 63110 . + 0 ID=cds-WP_000339957.1;Parent=gene-AC57_RS22445;Dbxref=GenBank:WP_000339957.1;Name=WP_000339957.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706085.1;locus_tag=AC57_RS22445;product=recombination-promoting nuclease RpnC;protein_id=WP_000339957.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 63184 64035 . - . ID=gene-AC57_RS22440;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AC57_RS22440;old_locus_tag=AC57_0122 NZ_JJLR01000007.1 Protein Homology CDS 63184 64035 . - 0 ID=cds-WP_001543437.1;Parent=gene-AC57_RS22440;Dbxref=GenBank:WP_001543437.1;Name=WP_001543437.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414675.1;locus_tag=AC57_RS22440;product=pantoate--beta-alanine ligase;protein_id=WP_001543437.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 64047 64841 . - . ID=gene-AC57_RS22435;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AC57_RS22435;old_locus_tag=AC57_0123 NZ_JJLR01000007.1 Protein Homology CDS 64047 64841 . - 0 ID=cds-WP_032237008.1;Parent=gene-AC57_RS22435;Dbxref=GenBank:WP_032237008.1;Name=WP_032237008.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AC57_RS22435;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_032237008.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 64975 66087 . - . ID=gene-AC57_RS22430;Name=AC57_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22430;old_locus_tag=AC57_0124 NZ_JJLR01000007.1 Protein Homology CDS 64975 66087 . - 0 ID=cds-WP_001161724.1;Parent=gene-AC57_RS22430;Dbxref=GenBank:WP_001161724.1;Name=WP_001161724.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001489301.1;locus_tag=AC57_RS22430;product=fimbrial protein;protein_id=WP_001161724.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 66099 66689 . - . ID=gene-AC57_RS0123060;Name=AC57_RS0123060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123060 NZ_JJLR01000007.1 Protein Homology CDS 66099 66689 . - 0 ID=cds-WP_000898741.1;Parent=gene-AC57_RS0123060;Dbxref=GenBank:WP_000898741.1;Name=WP_000898741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543438.1;locus_tag=AC57_RS0123060;product=fimbrial-like protein;protein_id=WP_000898741.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 66710 67306 . - . ID=gene-AC57_RS22425;Name=AC57_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22425;old_locus_tag=AC57_0127 NZ_JJLR01000007.1 Protein Homology CDS 66710 67306 . - 0 ID=cds-WP_000767887.1;Parent=gene-AC57_RS22425;Dbxref=GenBank:WP_000767887.1;Name=WP_000767887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241844.1;locus_tag=AC57_RS22425;product=fimbrial protein;protein_id=WP_000767887.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 67321 67878 . - . ID=gene-AC57_RS0123065;Name=AC57_RS0123065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123065;old_locus_tag=AC57_0128 NZ_JJLR01000007.1 Protein Homology CDS 67321 67878 . - 0 ID=cds-WP_000821233.1;Parent=gene-AC57_RS0123065;Dbxref=GenBank:WP_000821233.1;Name=WP_000821233.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001624576.1;locus_tag=AC57_RS0123065;product=fimbrial protein;protein_id=WP_000821233.1;transl_table=11 NZ_JJLR01000007.1 RefSeq pseudogene 67892 70492 . - . ID=gene-AC57_RS0123070;Name=AC57_RS0123070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123070;pseudo=true NZ_JJLR01000007.1 Protein Homology CDS 67892 70492 . - 0 ID=cds-AC57_RS0123070;Parent=gene-AC57_RS0123070;Note=internal stop;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308170.1;locus_tag=AC57_RS0123070;product=outer membrane usher protein;pseudo=true;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 70533 71258 . - . ID=gene-AC57_RS22420;Name=AC57_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22420;old_locus_tag=AC57_0131 NZ_JJLR01000007.1 Protein Homology CDS 70533 71258 . - 0 ID=cds-WP_000483959.1;Parent=gene-AC57_RS22420;Dbxref=GenBank:WP_000483959.1;Name=WP_000483959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000483959.1;locus_tag=AC57_RS22420;product=fimbrial chaperone;protein_id=WP_000483959.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 71341 71934 . - . ID=gene-AC57_RS22415;Name=AC57_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22415;old_locus_tag=AC57_0132 NZ_JJLR01000007.1 Protein Homology CDS 71341 71934 . - 0 ID=cds-WP_032237011.1;Parent=gene-AC57_RS22415;Dbxref=GenBank:WP_032237011.1;Name=WP_032237011.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741203.1;locus_tag=AC57_RS22415;product=fimbrial protein;protein_id=WP_032237011.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 72283 72762 . - . ID=gene-AC57_RS22410;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AC57_RS22410;old_locus_tag=AC57_0133 NZ_JJLR01000007.1 Protein Homology CDS 72283 72762 . - 0 ID=cds-WP_000215137.1;Parent=gene-AC57_RS22410;Dbxref=GenBank:WP_000215137.1;Name=WP_000215137.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215162.1;locus_tag=AC57_RS22410;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215137.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 72759 74156 . - . ID=gene-AC57_RS22405;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AC57_RS22405;old_locus_tag=AC57_0134 NZ_JJLR01000007.1 Protein Homology CDS 72759 74156 . - 0 ID=cds-WP_010723084.1;Parent=gene-AC57_RS22405;Dbxref=GenBank:WP_010723084.1;Name=WP_010723084.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AC57_RS22405;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_010723084.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 74216 75112 . - . ID=gene-AC57_RS22400;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AC57_RS22400;old_locus_tag=AC57_0135 NZ_JJLR01000007.1 Protein Homology CDS 74216 75112 . - 0 ID=cds-WP_032237032.1;Parent=gene-AC57_RS22400;Dbxref=GenBank:WP_032237032.1;Name=WP_032237032.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AC57_RS22400;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_032237032.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 75179 75634 . - . ID=gene-AC57_RS22395;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AC57_RS22395;old_locus_tag=AC57_0136 NZ_JJLR01000007.1 Protein Homology CDS 75179 75634 . - 0 ID=cds-WP_001155227.1;Parent=gene-AC57_RS22395;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AC57_RS22395;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 75812 76516 . - . ID=gene-AC57_RS22390;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AC57_RS22390;old_locus_tag=AC57_0137 NZ_JJLR01000007.1 Protein Homology CDS 75812 76516 . - 0 ID=cds-WP_000396036.1;Parent=gene-AC57_RS22390;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AC57_RS22390;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 76531 77061 . - . ID=gene-AC57_RS22385;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AC57_RS22385;old_locus_tag=AC57_0138 NZ_JJLR01000007.1 Protein Homology CDS 76531 77061 . - 0 ID=cds-WP_001294700.1;Parent=gene-AC57_RS22385;Dbxref=GenBank:WP_001294700.1;Name=WP_001294700.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414689.4;locus_tag=AC57_RS22385;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001294700.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 77135 79564 . + . ID=gene-AC57_RS22380;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AC57_RS22380;old_locus_tag=AC57_0139 NZ_JJLR01000007.1 Protein Homology CDS 77135 79564 . + 0 ID=cds-WP_032237012.1;Parent=gene-AC57_RS22380;Dbxref=GenBank:WP_032237012.1;Name=WP_032237012.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=AC57_RS22380;product=ATP-dependent helicase HrpB;protein_id=WP_032237012.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 79658 82192 . + . ID=gene-AC57_RS22375;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AC57_RS22375;old_locus_tag=AC57_0140 NZ_JJLR01000007.1 Protein Homology CDS 79658 82192 . + 0 ID=cds-WP_032237013.1;Parent=gene-AC57_RS22375;Dbxref=GenBank:WP_032237013.1;Name=WP_032237013.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706097.2;locus_tag=AC57_RS22375;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_032237013.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 82412 84655 . + . ID=gene-AC57_RS22370;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AC57_RS22370;old_locus_tag=AC57_0142 NZ_JJLR01000007.1 Protein Homology CDS 82412 84655 . + 0 ID=cds-WP_032237014.1;Parent=gene-AC57_RS22370;Dbxref=GenBank:WP_032237014.1;Name=WP_032237014.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=AC57_RS22370;product=ferrichrome porin FhuA;protein_id=WP_032237014.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 84706 85503 . + . ID=gene-AC57_RS22365;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AC57_RS22365;old_locus_tag=AC57_0143 NZ_JJLR01000007.1 Protein Homology CDS 84706 85503 . + 0 ID=cds-WP_001158931.1;Parent=gene-AC57_RS22365;Dbxref=GenBank:WP_001158931.1;Name=WP_001158931.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414693.1;locus_tag=AC57_RS22365;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158931.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 85503 86393 . + . ID=gene-AC57_RS22360;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AC57_RS22360;old_locus_tag=AC57_0144 NZ_JJLR01000007.1 Protein Homology CDS 85503 86393 . + 0 ID=cds-WP_000015990.1;Parent=gene-AC57_RS22360;Dbxref=GenBank:WP_000015990.1;Name=WP_000015990.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=AC57_RS22360;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_000015990.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 86390 88372 . + . ID=gene-AC57_RS22355;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AC57_RS22355;old_locus_tag=AC57_0145 NZ_JJLR01000007.1 Protein Homology CDS 86390 88372 . + 0 ID=cds-WP_032279436.1;Parent=gene-AC57_RS22355;Dbxref=GenBank:WP_032279436.1;Name=WP_032279436.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414695.1;locus_tag=AC57_RS22355;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_032279436.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 88530 89810 . - . ID=gene-AC57_RS22350;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AC57_RS22350;old_locus_tag=AC57_0146 NZ_JJLR01000007.1 Protein Homology CDS 88530 89810 . - 0 ID=cds-WP_032237016.1;Parent=gene-AC57_RS22350;Dbxref=GenBank:WP_032237016.1;Name=WP_032237016.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AC57_RS22350;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_032237016.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 89976 90023 . + . ID=gene-AC57_RS30475;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AC57_RS30475 NZ_JJLR01000007.1 Protein Homology CDS 89976 90023 . + 0 ID=cds-WP_211180485.1;Parent=gene-AC57_RS30475;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AC57_RS30475;product=protein YadX;protein_id=WP_211180485.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 90035 91456 . + . ID=gene-AC57_RS22345;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AC57_RS22345;old_locus_tag=AC57_0147 NZ_JJLR01000007.1 Protein Homology CDS 90035 91456 . + 0 ID=cds-WP_000845394.1;Parent=gene-AC57_RS22345;Dbxref=GenBank:WP_000845394.1;Name=WP_000845394.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414697.1;locus_tag=AC57_RS22345;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_000845394.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 91480 91545 . + . ID=gene-AC57_RS29545;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AC57_RS29545 NZ_JJLR01000007.1 Protein Homology CDS 91480 91545 . + 0 ID=cds-WP_120795373.1;Parent=gene-AC57_RS29545;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AC57_RS29545;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 91538 91882 . + . ID=gene-AC57_RS22340;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AC57_RS22340;old_locus_tag=AC57_0148 NZ_JJLR01000007.1 Protein Homology CDS 91538 91882 . + 0 ID=cds-WP_001295564.1;Parent=gene-AC57_RS22340;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AC57_RS22340;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 91929 92552 . - . ID=gene-AC57_RS22335;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AC57_RS22335;old_locus_tag=AC57_0149 NZ_JJLR01000007.1 Protein Homology CDS 91929 92552 . - 0 ID=cds-WP_000964221.1;Parent=gene-AC57_RS22335;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AC57_RS22335;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 92590 93390 . - . ID=gene-AC57_RS22330;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AC57_RS22330;old_locus_tag=AC57_0150 NZ_JJLR01000007.1 Protein Homology CDS 92590 93390 . - 0 ID=cds-WP_001295563.1;Parent=gene-AC57_RS22330;Dbxref=GenBank:WP_001295563.1;Name=WP_001295563.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AC57_RS22330;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001295563.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 93383 94081 . - . ID=gene-AC57_RS22325;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AC57_RS22325;old_locus_tag=AC57_0151 NZ_JJLR01000007.1 Protein Homology CDS 93383 94081 . - 0 ID=cds-WP_000689842.1;Parent=gene-AC57_RS22325;Dbxref=GenBank:WP_000689842.1;Name=WP_000689842.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AC57_RS22325;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689842.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 94165 95682 . + . ID=gene-AC57_RS22320;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AC57_RS22320;old_locus_tag=AC57_0152 NZ_JJLR01000007.1 Protein Homology CDS 94165 95682 . + 0 ID=cds-WP_000057093.1;Parent=gene-AC57_RS22320;Dbxref=GenBank:WP_000057093.1;Name=WP_000057093.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AC57_RS22320;product=dGTPase;protein_id=WP_000057093.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 95812 97236 . + . ID=gene-AC57_RS22315;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AC57_RS22315;old_locus_tag=AC57_0153 NZ_JJLR01000007.1 Protein Homology CDS 95812 97236 . + 0 ID=cds-WP_000753946.1;Parent=gene-AC57_RS22315;Dbxref=GenBank:WP_000753946.1;Name=WP_000753946.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AC57_RS22315;product=serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 97391 98548 . + . ID=gene-AC57_RS22310;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AC57_RS22310;old_locus_tag=AC57_0154 NZ_JJLR01000007.1 Protein Homology CDS 97391 98548 . + 0 ID=cds-WP_000929439.1;Parent=gene-AC57_RS22310;Dbxref=GenBank:WP_000929439.1;Name=WP_000929439.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308193.1;locus_tag=AC57_RS22310;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_000929439.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 98637 99023 . - . ID=gene-AC57_RS22305;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AC57_RS22305;old_locus_tag=AC57_0155 NZ_JJLR01000007.1 Protein Homology CDS 98637 99023 . - 0 ID=cds-WP_000272188.1;Parent=gene-AC57_RS22305;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AC57_RS22305;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 99185 99997 . - . ID=gene-AC57_RS22300;Name=yaeI;gbkey=Gene;gene=yaeI;gene_biotype=protein_coding;locus_tag=AC57_RS22300;old_locus_tag=AC57_0156 NZ_JJLR01000007.1 Protein Homology CDS 99185 99997 . - 0 ID=cds-WP_032279435.1;Parent=gene-AC57_RS22300;Dbxref=GenBank:WP_032279435.1;Name=WP_032279435.1;gbkey=CDS;gene=yaeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414706.2;locus_tag=AC57_RS22300;product=phosphodiesterase YaeI;protein_id=WP_032279435.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 100052 100876 . - . ID=gene-AC57_RS22295;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AC57_RS22295;old_locus_tag=AC57_0157 NZ_JJLR01000007.1 Protein Homology CDS 100052 100876 . - 0 ID=cds-WP_001186650.1;Parent=gene-AC57_RS22295;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AC57_RS22295;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 100907 103579 . - . ID=gene-AC57_RS22290;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AC57_RS22290;old_locus_tag=AC57_0158 NZ_JJLR01000007.1 Protein Homology CDS 100907 103579 . - 0 ID=cds-WP_001094588.1;Parent=gene-AC57_RS22290;Dbxref=GenBank:WP_001094588.1;Name=WP_001094588.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414709.1;locus_tag=AC57_RS22290;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_001094588.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 103641 104435 . - . ID=gene-AC57_RS22285;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AC57_RS22285;old_locus_tag=AC57_0159 NZ_JJLR01000007.1 Protein Homology CDS 103641 104435 . - 0 ID=cds-WP_001018194.1;Parent=gene-AC57_RS22285;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AC57_RS22285;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 104803 105528 . + . ID=gene-AC57_RS22280;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AC57_RS22280;old_locus_tag=AC57_0160 NZ_JJLR01000007.1 Protein Homology CDS 104803 105528 . + 0 ID=cds-WP_000246882.1;Parent=gene-AC57_RS22280;Dbxref=GenBank:WP_000246882.1;Name=WP_000246882.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AC57_RS22280;product=30S ribosomal protein S2;protein_id=WP_000246882.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 105786 106637 . + . ID=gene-AC57_RS22275;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AC57_RS22275;old_locus_tag=AC57_0162 NZ_JJLR01000007.1 Protein Homology CDS 105786 106637 . + 0 ID=cds-WP_000818114.1;Parent=gene-AC57_RS22275;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AC57_RS22275;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 106784 107509 . + . ID=gene-AC57_RS22270;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AC57_RS22270;old_locus_tag=AC57_0163 NZ_JJLR01000007.1 Protein Homology CDS 106784 107509 . + 0 ID=cds-WP_000224573.1;Parent=gene-AC57_RS22270;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AC57_RS22270;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 107659 108216 . + . ID=gene-AC57_RS22265;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AC57_RS22265;old_locus_tag=AC57_0164 NZ_JJLR01000007.1 Protein Homology CDS 107659 108216 . + 0 ID=cds-WP_000622418.1;Parent=gene-AC57_RS22265;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AC57_RS22265;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 108308 109504 . + . ID=gene-AC57_RS22260;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AC57_RS22260;old_locus_tag=AC57_0165 NZ_JJLR01000007.1 Protein Homology CDS 108308 109504 . + 0 ID=cds-WP_001570702.1;Parent=gene-AC57_RS22260;Dbxref=GenBank:WP_001570702.1;Name=WP_001570702.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AC57_RS22260;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_001570702.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 109693 110451 . + . ID=gene-AC57_RS22255;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AC57_RS22255;old_locus_tag=AC57_0166 NZ_JJLR01000007.1 Protein Homology CDS 109693 110451 . + 0 ID=cds-WP_032279433.1;Parent=gene-AC57_RS22255;Dbxref=GenBank:WP_032279433.1;Name=WP_032279433.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AC57_RS22255;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_032279433.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 110464 111321 . + . ID=gene-AC57_RS22250;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AC57_RS22250;old_locus_tag=AC57_0168 NZ_JJLR01000007.1 Protein Homology CDS 110464 111321 . + 0 ID=cds-WP_000922446.1;Parent=gene-AC57_RS22250;Dbxref=GenBank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AC57_RS22250;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 111333 112685 . + . ID=gene-AC57_RS22245;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AC57_RS22245;old_locus_tag=AC57_0169 NZ_JJLR01000007.1 Protein Homology CDS 111333 112685 . + 0 ID=cds-WP_001295561.1;Parent=gene-AC57_RS22245;Dbxref=GenBank:WP_001295561.1;Name=WP_001295561.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AC57_RS22245;product=sigma E protease regulator RseP;protein_id=WP_001295561.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 112715 115147 . + . ID=gene-AC57_RS22240;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AC57_RS22240;old_locus_tag=AC57_0170 NZ_JJLR01000007.1 Protein Homology CDS 112715 115147 . + 0 ID=cds-WP_001240896.1;Parent=gene-AC57_RS22240;Dbxref=GenBank:WP_001240896.1;Name=WP_001240896.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AC57_RS22240;product=outer membrane protein assembly factor BamA;protein_id=WP_001240896.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 115269 115754 . + . ID=gene-AC57_RS22235;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AC57_RS22235;old_locus_tag=AC57_0171 NZ_JJLR01000007.1 Protein Homology CDS 115269 115754 . + 0 ID=cds-WP_000758956.1;Parent=gene-AC57_RS22235;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AC57_RS22235;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 115758 116783 . + . ID=gene-AC57_RS22230;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AC57_RS22230;old_locus_tag=AC57_0172 NZ_JJLR01000007.1 Protein Homology CDS 115758 116783 . + 0 ID=cds-WP_001139279.1;Parent=gene-AC57_RS22230;Dbxref=GenBank:WP_001139279.1;Name=WP_001139279.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AC57_RS22230;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 116888 117343 . + . ID=gene-AC57_RS22225;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AC57_RS22225;old_locus_tag=AC57_0173 NZ_JJLR01000007.1 Protein Homology CDS 116888 117343 . + 0 ID=cds-WP_000210739.1;Parent=gene-AC57_RS22225;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AC57_RS22225;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 117347 118135 . + . ID=gene-AC57_RS22220;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AC57_RS22220;old_locus_tag=AC57_0174 NZ_JJLR01000007.1 Protein Homology CDS 117347 118135 . + 0 ID=cds-WP_000565966.1;Parent=gene-AC57_RS22220;Dbxref=GenBank:WP_000565966.1;Name=WP_000565966.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AC57_RS22220;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_000565966.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 118135 119283 . + . ID=gene-AC57_RS22215;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AC57_RS22215;old_locus_tag=AC57_0175 NZ_JJLR01000007.1 Protein Homology CDS 118135 119283 . + 0 ID=cds-WP_032237020.1;Parent=gene-AC57_RS22215;Dbxref=GenBank:WP_032237020.1;Name=WP_032237020.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AC57_RS22215;product=lipid-A-disaccharide synthase;protein_id=WP_032237020.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 119280 119876 . + . ID=gene-AC57_RS22210;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AC57_RS22210;old_locus_tag=AC57_0176 NZ_JJLR01000007.1 Protein Homology CDS 119280 119876 . + 0 ID=cds-WP_000569400.1;Parent=gene-AC57_RS22210;Dbxref=GenBank:WP_000569400.1;Name=WP_000569400.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308212.1;locus_tag=AC57_RS22210;product=ribonuclease HII;protein_id=WP_000569400.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 119913 123395 . + . ID=gene-AC57_RS22205;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AC57_RS22205;old_locus_tag=AC57_0177 NZ_JJLR01000007.1 Protein Homology CDS 119913 123395 . + 0 ID=cds-WP_032237021.1;Parent=gene-AC57_RS22205;Dbxref=GenBank:WP_032237021.1;Name=WP_032237021.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414726.1;locus_tag=AC57_RS22205;product=DNA polymerase III subunit alpha;protein_id=WP_032237021.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 123408 124367 . + . ID=gene-AC57_RS22200;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AC57_RS22200;old_locus_tag=AC57_0178 NZ_JJLR01000007.1 Protein Homology CDS 123408 124367 . + 0 ID=cds-WP_000055741.1;Parent=gene-AC57_RS22200;Dbxref=GenBank:WP_000055741.1;Name=WP_000055741.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AC57_RS22200;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 124466 126607 . + . ID=gene-AC57_RS22195;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AC57_RS22195;old_locus_tag=AC57_0179 NZ_JJLR01000007.1 Protein Homology CDS 124466 126607 . + 0 ID=cds-WP_001020964.1;Parent=gene-AC57_RS22195;Dbxref=GenBank:WP_001020964.1;Name=WP_001020964.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AC57_RS22195;product=lysine decarboxylase LdcC;protein_id=WP_001020964.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 126664 127053 . + . ID=gene-AC57_RS22190;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AC57_RS22190;old_locus_tag=AC57_0180 NZ_JJLR01000007.1 Protein Homology CDS 126664 127053 . + 0 ID=cds-WP_000901098.1;Parent=gene-AC57_RS22190;Dbxref=GenBank:WP_000901098.1;Name=WP_000901098.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=AC57_RS22190;product=VOC family protein;protein_id=WP_000901098.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 127118 128413 . + . ID=gene-AC57_RS22185;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AC57_RS22185;old_locus_tag=AC57_0181 NZ_JJLR01000007.1 Protein Homology CDS 127118 128413 . + 0 ID=cds-WP_032267773.1;Parent=gene-AC57_RS22185;Dbxref=GenBank:WP_032267773.1;Name=WP_032267773.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308217.1;locus_tag=AC57_RS22185;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_032267773.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 128466 128726 . - . ID=gene-AC57_RS22180;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AC57_RS22180;old_locus_tag=AC57_0182 NZ_JJLR01000007.1 Protein Homology CDS 128466 128726 . - 0 ID=cds-WP_000062312.1;Parent=gene-AC57_RS22180;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AC57_RS22180;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 128713 128913 . - . ID=gene-AC57_RS22175;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AC57_RS22175;old_locus_tag=AC57_0183 NZ_JJLR01000007.1 Protein Homology CDS 128713 128913 . - 0 ID=cds-WP_000417058.1;Parent=gene-AC57_RS22175;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AC57_RS22175;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 129079 129624 . + . ID=gene-AC57_RS22170;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AC57_RS22170;old_locus_tag=AC57_0184 NZ_JJLR01000007.1 Protein Homology CDS 129079 129624 . + 0 ID=cds-WP_001185282.1;Parent=gene-AC57_RS22170;Dbxref=GenBank:WP_001185282.1;Name=WP_001185282.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AC57_RS22170;product=YaeQ family protein;protein_id=WP_001185282.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 129621 130043 . + . ID=gene-AC57_RS22165;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AC57_RS22165;old_locus_tag=AC57_0185 NZ_JJLR01000007.1 Protein Homology CDS 129621 130043 . + 0 ID=cds-WP_000635545.1;Parent=gene-AC57_RS22165;Dbxref=GenBank:WP_000635545.1;Name=WP_000635545.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308220.1;locus_tag=AC57_RS22165;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_000635545.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 130056 130766 . + . ID=gene-AC57_RS22160;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AC57_RS22160;old_locus_tag=AC57_0186 NZ_JJLR01000007.1 Protein Homology CDS 130056 130766 . + 0 ID=cds-WP_032237023.1;Parent=gene-AC57_RS22160;Dbxref=GenBank:WP_032237023.1;Name=WP_032237023.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308221.1;locus_tag=AC57_RS22160;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_032237023.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 130966 131790 . - . ID=gene-AC57_RS22155;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;locus_tag=AC57_RS22155;old_locus_tag=AC57_0187 NZ_JJLR01000007.1 Protein Homology CDS 130966 131790 . - 0 ID=cds-WP_032237024.1;Parent=gene-AC57_RS22155;Dbxref=GenBank:WP_032237024.1;Name=WP_032237024.1;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308222.1;locus_tag=AC57_RS22155;product=YaeF family permuted papain-like enzyme;protein_id=WP_032237024.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 131843 133561 . - . ID=gene-AC57_RS22150;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AC57_RS22150;old_locus_tag=AC57_0188 NZ_JJLR01000007.1 Protein Homology CDS 131843 133561 . - 0 ID=cds-WP_001260703.1;Parent=gene-AC57_RS22150;Dbxref=GenBank:WP_001260703.1;Name=WP_001260703.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AC57_RS22150;product=proline--tRNA ligase;protein_id=WP_001260703.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 133672 134379 . - . ID=gene-AC57_RS22145;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AC57_RS22145;old_locus_tag=AC57_0189 NZ_JJLR01000007.1 Protein Homology CDS 133672 134379 . - 0 ID=cds-WP_000094011.1;Parent=gene-AC57_RS22145;Dbxref=GenBank:WP_000094011.1;Name=WP_000094011.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AC57_RS22145;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_000094011.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 134376 134780 . - . ID=gene-AC57_RS22140;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AC57_RS22140;old_locus_tag=AC57_0190 NZ_JJLR01000007.1 Protein Homology CDS 134376 134780 . - 0 ID=cds-WP_032237026.1;Parent=gene-AC57_RS22140;Dbxref=GenBank:WP_032237026.1;Name=WP_032237026.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AC57_RS22140;product=Rcs stress response system protein RcsF;protein_id=WP_032237026.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 134898 135713 . - . ID=gene-AC57_RS22135;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AC57_RS22135;old_locus_tag=AC57_0191 NZ_JJLR01000007.1 Protein Homology CDS 134898 135713 . - 0 ID=cds-WP_000874224.1;Parent=gene-AC57_RS22135;Dbxref=GenBank:WP_000874224.1;Name=WP_000874224.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706143.1;locus_tag=AC57_RS22135;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874224.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 135753 136406 . - . ID=gene-AC57_RS22130;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AC57_RS22130;old_locus_tag=AC57_0192 NZ_JJLR01000007.1 Protein Homology CDS 135753 136406 . - 0 ID=cds-WP_001294600.1;Parent=gene-AC57_RS22130;Dbxref=GenBank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AC57_RS22130;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 136399 137430 . - . ID=gene-AC57_RS22125;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AC57_RS22125;old_locus_tag=AC57_0193 NZ_JJLR01000007.1 Protein Homology CDS 136399 137430 . - 0 ID=cds-WP_032237028.1;Parent=gene-AC57_RS22125;Dbxref=GenBank:WP_032237028.1;Name=WP_032237028.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AC57_RS22125;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_032237028.1;transl_table=11 NZ_JJLR01000007.1 RefSeq gene 137618 138193 . + . ID=gene-AC57_RS22120;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AC57_RS22120;old_locus_tag=AC57_0194 NZ_JJLR01000007.1 Protein Homology CDS 137618 138193 . + 0 ID=cds-WP_032246201.1;Parent=gene-AC57_RS22120;Dbxref=GenBank:WP_032246201.1;Name=WP_032246201.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308229.1;locus_tag=AC57_RS22120;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_032246201.1;transl_table=11 ##sequence-region NZ_JJLR01000008.1 1 1966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000008.1 RefSeq region 1 1966 . + . ID=NZ_JJLR01000008.1:1..1966;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000008.1 RefSeq gene 1 80 . - . ID=gene-AC57_RS26375;Name=AC57_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26375;partial=true;start_range=.,1 NZ_JJLR01000008.1 Protein Homology CDS 1 80 . - 0 ID=cds-WP_304529247.1;Parent=gene-AC57_RS26375;Dbxref=GenBank:WP_304529247.1;Name=WP_304529247.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26375;partial=true;product=IS1 family transposase;protein_id=WP_304529247.1;start_range=.,1;transl_table=11 NZ_JJLR01000008.1 RefSeq gene 753 1966 . + . ID=gene-AC57_RS22115;Name=tssI;end_range=1966,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AC57_RS22115;old_locus_tag=AC57_0195;partial=true NZ_JJLR01000008.1 Protein Homology CDS 753 1966 . + 0 ID=cds-WP_032285625.1;Parent=gene-AC57_RS22115;Dbxref=GenBank:WP_032285625.1;Name=WP_032285625.1;Ontology_term=GO:0033103;end_range=1966,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AC57_RS22115;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_032285625.1;transl_table=11 ##sequence-region NZ_JJLR01000009.1 1 1581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000009.1 RefSeq region 1 1581 . + . ID=NZ_JJLR01000009.1:1..1581;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000009.1 RefSeq pseudogene 1 340 . + . ID=gene-AC57_RS22110;Name=AC57_RS22110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS22110;old_locus_tag=AC57_0196;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000009.1 Protein Homology CDS 1 340 . + 1 ID=cds-AC57_RS22110;Parent=gene-AC57_RS22110;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS22110;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000009.1 RefSeq pseudogene 355 903 . + . ID=gene-AC57_RS22105;Name=AC57_RS22105;end_range=903,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS22105;old_locus_tag=AC57_0197;partial=true;pseudo=true;start_range=.,355 NZ_JJLR01000009.1 Protein Homology CDS 355 903 . + 0 ID=cds-AC57_RS22105;Parent=gene-AC57_RS22105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=903,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS22105;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,355;transl_table=11 NZ_JJLR01000009.1 RefSeq gene 952 1581 . + . ID=gene-AC57_RS22100;Name=AC57_RS22100;end_range=1581,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22100;old_locus_tag=AC57_0198;partial=true NZ_JJLR01000009.1 Protein Homology CDS 952 1201 . + 0 ID=cds-WP_249401506.1;Parent=gene-AC57_RS22100;Dbxref=GenBank:WP_249401506.1;Name=WP_249401506.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS22100;partial=true;product=IS1 family transposase;protein_id=WP_249401506.1;transl_table=11 NZ_JJLR01000009.1 Protein Homology CDS 1201 1581 . + 2 ID=cds-WP_249401506.1;Parent=gene-AC57_RS22100;Dbxref=GenBank:WP_249401506.1;Name=WP_249401506.1;Note=programmed frameshift;Ontology_term=GO:0004803;end_range=1581,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS22100;partial=true;product=IS1 family transposase;protein_id=WP_249401506.1;transl_table=11 ##sequence-region NZ_JJLR01000010.1 1 48872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000010.1 RefSeq region 1 48872 . + . ID=NZ_JJLR01000010.1:1..48872;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000010.1 RefSeq gene 85 161 . + . ID=gene-AC57_RS22095;Name=AC57_RS22095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS22095;old_locus_tag=AC57_0199 NZ_JJLR01000010.1 tRNAscan-SE tRNA 85 161 . + . ID=rna-AC57_RS22095;Parent=gene-AC57_RS22095;anticodon=(pos:119..121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS22095;product=tRNA-Asp NZ_JJLR01000010.1 tRNAscan-SE exon 85 161 . + . ID=exon-AC57_RS22095-1;Parent=rna-AC57_RS22095;anticodon=(pos:119..121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS22095;product=tRNA-Asp NZ_JJLR01000010.1 RefSeq gene 324 1127 . + . ID=gene-AC57_RS22090;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=AC57_RS22090;old_locus_tag=AC57_0200 NZ_JJLR01000010.1 Protein Homology CDS 324 1127 . + 0 ID=cds-WP_032237932.1;Parent=gene-AC57_RS22090;Dbxref=GenBank:WP_032237932.1;Name=WP_032237932.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AC57_RS22090;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_032237932.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 1124 2038 . - . ID=gene-AC57_RS22085;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AC57_RS22085;old_locus_tag=AC57_0201 NZ_JJLR01000010.1 Protein Homology CDS 1124 2038 . - 0 ID=cds-WP_000648565.1;Parent=gene-AC57_RS22085;Dbxref=GenBank:WP_000648565.1;Name=WP_000648565.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414744.1;locus_tag=AC57_RS22085;product=DNA-binding transcriptional regulator YafC;protein_id=WP_000648565.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 2279 3079 . + . ID=gene-AC57_RS22080;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=AC57_RS22080;old_locus_tag=AC57_0202 NZ_JJLR01000010.1 Protein Homology CDS 2279 3079 . + 0 ID=cds-WP_001230983.1;Parent=gene-AC57_RS22080;Dbxref=GenBank:WP_001230983.1;Name=WP_001230983.1;gbkey=CDS;gene=yafD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AC57_RS22080;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001230983.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 3157 3927 . + . ID=gene-AC57_RS22075;Name=AC57_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22075;old_locus_tag=AC57_0203 NZ_JJLR01000010.1 Protein Homology CDS 3157 3927 . + 0 ID=cds-WP_032285629.1;Parent=gene-AC57_RS22075;Dbxref=GenBank:WP_032285629.1;Name=WP_032285629.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308233.1;locus_tag=AC57_RS22075;product=class I SAM-dependent methyltransferase;protein_id=WP_032285629.1;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 3975 5334 . - . ID=gene-AC57_RS0123080;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=pseudogene;locus_tag=AC57_RS0123080;pseudo=true NZ_JJLR01000010.1 Protein Homology CDS 3975 5334 . - 0 ID=cds-AC57_RS0123080;Parent=gene-AC57_RS0123080;Note=frameshifted;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414747.1;locus_tag=AC57_RS0123080;product=murein transglycosylase D;pseudo=true;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 5406 6161 . - . ID=gene-AC57_RS22070;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AC57_RS22070;old_locus_tag=AC57_0206 NZ_JJLR01000010.1 Protein Homology CDS 5406 6161 . - 0 ID=cds-WP_001052752.1;Parent=gene-AC57_RS22070;Dbxref=GenBank:WP_001052752.1;Name=WP_001052752.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AC57_RS22070;product=hydroxyacylglutathione hydrolase;protein_id=WP_001052752.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 6195 6917 . + . ID=gene-AC57_RS22065;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=AC57_RS22065;old_locus_tag=AC57_0207 NZ_JJLR01000010.1 Protein Homology CDS 6195 6917 . + 0 ID=cds-WP_032237934.1;Parent=gene-AC57_RS22065;Dbxref=GenBank:WP_032237934.1;Name=WP_032237934.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yafS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AC57_RS22065;product=class I SAM-dependent methyltransferase;protein_id=WP_032237934.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 6914 7381 . - . ID=gene-AC57_RS22060;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AC57_RS22060;old_locus_tag=AC57_0208 NZ_JJLR01000010.1 Protein Homology CDS 6914 7381 . - 0 ID=cds-WP_032237935.1;Parent=gene-AC57_RS22060;Dbxref=GenBank:WP_032237935.1;Name=WP_032237935.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AC57_RS22060;product=ribonuclease HI;protein_id=WP_032237935.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 7446 8177 . + . ID=gene-AC57_RS22055;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AC57_RS22055;old_locus_tag=AC57_0209 NZ_JJLR01000010.1 Protein Homology CDS 7446 8177 . + 0 ID=cds-WP_001366128.1;Parent=gene-AC57_RS22055;Dbxref=GenBank:WP_001366128.1;Name=WP_001366128.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706156.2;locus_tag=AC57_RS22055;product=DNA polymerase III subunit epsilon;protein_id=WP_001366128.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 8310 8386 . + . ID=gene-AC57_RS22050;Name=AC57_RS22050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS22050;old_locus_tag=AC57_0210 NZ_JJLR01000010.1 tRNAscan-SE tRNA 8310 8386 . + . ID=rna-AC57_RS22050;Parent=gene-AC57_RS22050;anticodon=(pos:8344..8346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS22050;product=tRNA-Asp NZ_JJLR01000010.1 tRNAscan-SE exon 8310 8386 . + . ID=exon-AC57_RS22050-1;Parent=rna-AC57_RS22050;anticodon=(pos:8344..8346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS22050;product=tRNA-Asp NZ_JJLR01000010.1 RefSeq gene 8518 9564 . - . ID=gene-AC57_RS22045;Name=AC57_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22045;old_locus_tag=AC57_0211 NZ_JJLR01000010.1 Protein Homology CDS 8518 9564 . - 0 ID=cds-WP_032279691.1;Parent=gene-AC57_RS22045;Dbxref=GenBank:WP_032279691.1;Name=WP_032279691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706157.1;locus_tag=AC57_RS22045;product=ImpA family type VI secretion system protein;protein_id=WP_032279691.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 9575 10570 . - . ID=gene-AC57_RS22040;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=AC57_RS22040;old_locus_tag=AC57_0212 NZ_JJLR01000010.1 Protein Homology CDS 9575 10570 . - 0 ID=cds-WP_032237937.1;Parent=gene-AC57_RS22040;Dbxref=GenBank:WP_032237937.1;Name=WP_032237937.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601590.1;locus_tag=AC57_RS22040;product=type VI secretion system baseplate subunit TssG;protein_id=WP_032237937.1;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 10567 11697 . - . ID=gene-AC57_RS22035;Name=tssF;end_range=11697,.;gbkey=Gene;gene=tssF;gene_biotype=pseudogene;locus_tag=AC57_RS22035;old_locus_tag=AC57_0213;partial=true;pseudo=true NZ_JJLR01000010.1 Protein Homology CDS 10567 11697 . - 0 ID=cds-AC57_RS22035;Parent=gene-AC57_RS22035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0033103;end_range=11697,.;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706159.1;locus_tag=AC57_RS22035;partial=true;product=type VI secretion system baseplate subunit TssF;pseudo=true;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 11696 12016 . - . ID=gene-AC57_RS30595;Name=AC57_RS30595;end_range=12016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30595;old_locus_tag=AC57_0214;partial=true;pseudo=true;start_range=.,11696 NZ_JJLR01000010.1 Protein Homology CDS 11696 12016 . - 0 ID=cds-AC57_RS30595;Parent=gene-AC57_RS30595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=12016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_103253951.1;locus_tag=AC57_RS30595;partial=true;product=TagK domain-containing protein;pseudo=true;start_range=.,11696;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 12040 12243 . + . ID=gene-AC57_RS22030;Name=AC57_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22030;old_locus_tag=AC57_0215 NZ_JJLR01000010.1 Protein Homology CDS 12040 12243 . + 0 ID=cds-WP_077756399.1;Parent=gene-AC57_RS22030;Dbxref=GenBank:WP_077756399.1;Name=WP_077756399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662105.1;locus_tag=AC57_RS22030;product=hypothetical protein;protein_id=WP_077756399.1;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 12305 12469 . + . ID=gene-AC57_RS26380;Name=AC57_RS26380;end_range=12469,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26380;partial=true;pseudo=true NZ_JJLR01000010.1 Protein Homology CDS 12305 12469 . + 0 ID=cds-AC57_RS26380;Parent=gene-AC57_RS26380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12469,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459270.1;locus_tag=AC57_RS26380;partial=true;product=type VI secretion system contractile sheath small subunit;pseudo=true;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 12451 14324 . + . ID=gene-AC57_RS31155;Name=tssM;end_range=14324,.;gbkey=Gene;gene=tssM;gene_biotype=pseudogene;locus_tag=AC57_RS31155;old_locus_tag=AC57_0216;partial=true;pseudo=true;start_range=.,12451 NZ_JJLR01000010.1 Protein Homology CDS 12451 14324 . + 0 ID=cds-AC57_RS31155;Parent=gene-AC57_RS31155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0033103;end_range=14324,.;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459283.1;locus_tag=AC57_RS31155;partial=true;product=type VI secretion system membrane subunit TssM;pseudo=true;start_range=.,12451;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 15282 17024 . + . ID=gene-AC57_RS31160;Name=AC57_RS31160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31160;old_locus_tag=AC57_0218 NZ_JJLR01000010.1 Protein Homology CDS 15282 17024 . + 0 ID=cds-WP_432757402.1;Parent=gene-AC57_RS31160;Dbxref=GenBank:WP_432757402.1;Name=WP_432757402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC57_RS31160;product=RHS repeat-associated core domain-containing protein;protein_id=WP_432757402.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 17027 17278 . + . ID=gene-AC57_RS22025;Name=AC57_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS22025;old_locus_tag=AC57_0219 NZ_JJLR01000010.1 GeneMarkS-2+ CDS 17027 17278 . + 0 ID=cds-WP_032279692.1;Parent=gene-AC57_RS22025;Dbxref=GenBank:WP_032279692.1;Name=WP_032279692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS22025;product=hypothetical protein;protein_id=WP_032279692.1;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 17368 18168 . + . ID=gene-AC57_RS0123100;Name=AC57_RS0123100;end_range=18168,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123100;partial=true;pseudo=true;start_range=.,17368 NZ_JJLR01000010.1 Protein Homology CDS 17368 18168 . + 0 ID=cds-AC57_RS0123100;Parent=gene-AC57_RS0123100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=18168,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=AC57_RS0123100;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,17368;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 18534 18872 . + . ID=gene-AC57_RS0123105;Name=AC57_RS0123105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123105 NZ_JJLR01000010.1 Protein Homology CDS 18534 18872 . + 0 ID=cds-WP_032237316.1;Parent=gene-AC57_RS0123105;Dbxref=GenBank:WP_032237316.1;Name=WP_032237316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601612.1;locus_tag=AC57_RS0123105;product=hypothetical protein;protein_id=WP_032237316.1;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 19267 19641 . + . ID=gene-AC57_RS26390;Name=AC57_RS26390;end_range=19641,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26390;partial=true;pseudo=true NZ_JJLR01000010.1 Protein Homology CDS 19267 19641 . + 0 ID=cds-AC57_RS26390;Parent=gene-AC57_RS26390;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=19641,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS26390;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 19692 20462 . - . ID=gene-AC57_RS22020;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AC57_RS22020;old_locus_tag=AC57_0222 NZ_JJLR01000010.1 Protein Homology CDS 19692 20462 . - 0 ID=cds-WP_032237315.1;Parent=gene-AC57_RS22020;Dbxref=GenBank:WP_032237315.1;Name=WP_032237315.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000015781.1;locus_tag=AC57_RS22020;product=2-oxoglutaramate amidase;protein_id=WP_032237315.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 20643 21089 . + . ID=gene-AC57_RS22015;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AC57_RS22015;old_locus_tag=AC57_0223 NZ_JJLR01000010.1 Protein Homology CDS 20643 21089 . + 0 ID=cds-WP_001308392.1;Parent=gene-AC57_RS22015;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AC57_RS22015;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 21132 23576 . - . ID=gene-AC57_RS22010;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AC57_RS22010;old_locus_tag=AC57_0224 NZ_JJLR01000010.1 Protein Homology CDS 21132 23576 . - 0 ID=cds-WP_000973077.1;Parent=gene-AC57_RS22010;Dbxref=GenBank:WP_000973077.1;Name=WP_000973077.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AC57_RS22010;product=acyl-CoA dehydrogenase FadE;protein_id=WP_000973077.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 23816 24394 . + . ID=gene-AC57_RS22005;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AC57_RS22005;old_locus_tag=AC57_0225 NZ_JJLR01000010.1 Protein Homology CDS 23816 24394 . + 0 ID=cds-WP_000284050.1;Parent=gene-AC57_RS22005;Dbxref=GenBank:WP_000284050.1;Name=WP_000284050.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AC57_RS22005;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_000284050.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 24600 25367 . + . ID=gene-AC57_RS22000;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AC57_RS22000;old_locus_tag=AC57_0226 NZ_JJLR01000010.1 Protein Homology CDS 24600 25367 . + 0 ID=cds-WP_000333379.1;Parent=gene-AC57_RS22000;Dbxref=GenBank:WP_000333379.1;Name=WP_000333379.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706226.2;locus_tag=AC57_RS22000;product=class II glutamine amidotransferase;protein_id=WP_000333379.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 25338 26078 . - . ID=gene-AC57_RS21995;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AC57_RS21995;old_locus_tag=AC57_0227 NZ_JJLR01000010.1 Protein Homology CDS 25338 26078 . - 0 ID=cds-WP_001225679.1;Parent=gene-AC57_RS21995;Dbxref=GenBank:WP_001225679.1;Name=WP_001225679.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AC57_RS21995;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_001225679.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 26234 26512 . - . ID=gene-AC57_RS0123110;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=AC57_RS0123110;old_locus_tag=AC57_0228 NZ_JJLR01000010.1 Protein Homology CDS 26234 26512 . - 0 ID=cds-WP_000615976.1;Parent=gene-AC57_RS0123110;Dbxref=GenBank:WP_000615976.1;Name=WP_000615976.1;gbkey=CDS;gene=yafQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414760.1;locus_tag=AC57_RS0123110;product=type II toxin-antitoxin system mRNA interferase toxin YafQ;protein_id=WP_000615976.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 26515 26775 . - . ID=gene-AC57_RS21990;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=AC57_RS21990;old_locus_tag=AC57_0229 NZ_JJLR01000010.1 Protein Homology CDS 26515 26775 . - 0 ID=cds-WP_000729704.1;Parent=gene-AC57_RS21990;Dbxref=GenBank:WP_000729704.1;Name=WP_000729704.1;gbkey=CDS;gene=dinJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308280.1;locus_tag=AC57_RS21990;product=type II toxin-antitoxin system antitoxin DinJ;protein_id=WP_000729704.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 26991 27734 . + . ID=gene-AC57_RS21985;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AC57_RS21985;old_locus_tag=AC57_0231 NZ_JJLR01000010.1 Protein Homology CDS 26991 27734 . + 0 ID=cds-WP_248841533.1;Parent=gene-AC57_RS21985;Dbxref=GenBank:WP_248841533.1;Name=WP_248841533.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001382845.1;locus_tag=AC57_RS21985;product=C40 family peptidase;protein_id=WP_248841533.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 27910 28407 . + . ID=gene-AC57_RS21980;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AC57_RS21980;old_locus_tag=AC57_0232 NZ_JJLR01000010.1 Protein Homology CDS 27910 28407 . + 0 ID=cds-WP_000006256.1;Parent=gene-AC57_RS21980;Dbxref=GenBank:WP_000006256.1;Name=WP_000006256.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706228.1;locus_tag=AC57_RS21980;product=REP-associated tyrosine transposase RayT;protein_id=WP_000006256.1;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 28623 30341 . - . ID=gene-AC57_RS21975;Name=AC57_RS21975;end_range=30341,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS21975;old_locus_tag=AC57_0235;partial=true;pseudo=true NZ_JJLR01000010.1 Protein Homology CDS 28623 30341 . - 0 ID=cds-AC57_RS21975;Parent=gene-AC57_RS21975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0044780,GO:0071978;end_range=30341,.;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140833.1;locus_tag=AC57_RS21975;partial=true;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 30307 31092 . + . ID=gene-AC57_RS21970;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AC57_RS21970;old_locus_tag=AC57_0236 NZ_JJLR01000010.1 Protein Homology CDS 30307 31092 . + 0 ID=cds-WP_074520092.1;Parent=gene-AC57_RS21970;Dbxref=GenBank:WP_074520092.1;Name=WP_074520092.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706230.2;locus_tag=AC57_RS21970;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_074520092.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 31163 32218 . + . ID=gene-AC57_RS21965;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AC57_RS21965;old_locus_tag=AC57_0237 NZ_JJLR01000010.1 Protein Homology CDS 31163 32218 . + 0 ID=cds-WP_001226164.1;Parent=gene-AC57_RS21965;Dbxref=GenBank:WP_001226164.1;Name=WP_001226164.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AC57_RS21965;product=DNA polymerase IV;protein_id=WP_001226164.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 32270 32563 . + . ID=gene-AC57_RS21960;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;locus_tag=AC57_RS21960;old_locus_tag=AC57_0238 NZ_JJLR01000010.1 Protein Homology CDS 32270 32563 . + 0 ID=cds-WP_000554757.1;Parent=gene-AC57_RS21960;Dbxref=GenBank:WP_000554757.1;Name=WP_000554757.1;gbkey=CDS;gene=yafN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308286.1;locus_tag=AC57_RS21960;product=type I toxin-antitoxin system antitoxin YafN;protein_id=WP_000554757.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 32566 32964 . + . ID=gene-AC57_RS21955;Name=yafO;gbkey=Gene;gene=yafO;gene_biotype=protein_coding;locus_tag=AC57_RS21955;old_locus_tag=AC57_0239 NZ_JJLR01000010.1 Protein Homology CDS 32566 32964 . + 0 ID=cds-WP_001263493.1;Parent=gene-AC57_RS21955;Dbxref=GenBank:WP_001263493.1;Name=WP_001263493.1;gbkey=CDS;gene=yafO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706233.1;locus_tag=AC57_RS21955;product=type II toxin-antitoxin system mRNA interferase toxin YafO;protein_id=WP_001263493.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 32974 33426 . + . ID=gene-AC57_RS21950;Name=yafP;gbkey=Gene;gene=yafP;gene_biotype=protein_coding;locus_tag=AC57_RS21950;old_locus_tag=AC57_0240 NZ_JJLR01000010.1 Protein Homology CDS 32974 33426 . + 0 ID=cds-WP_001059847.1;Parent=gene-AC57_RS21950;Dbxref=GenBank:WP_001059847.1;Name=WP_001059847.1;gbkey=CDS;gene=yafP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706234.1;locus_tag=AC57_RS21950;product=GNAT family N-acetyltransferase;protein_id=WP_001059847.1;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 33672 33875 . + . ID=gene-AC57_RS21945;Name=AC57_RS21945;end_range=33875,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS21945;old_locus_tag=AC57_0241;partial=true;pseudo=true NZ_JJLR01000010.1 Protein Homology CDS 33672 33875 . + 0 ID=cds-AC57_RS21945;Parent=gene-AC57_RS21945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33875,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706235.2;locus_tag=AC57_RS21945;partial=true;product=RtcB family protein;pseudo=true;transl_table=11 NZ_JJLR01000010.1 RefSeq pseudogene 33889 34395 . + . ID=gene-AC57_RS21940;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=pseudogene;locus_tag=AC57_RS21940;old_locus_tag=AC57_0242;partial=true;pseudo=true;start_range=.,33889 NZ_JJLR01000010.1 Protein Homology CDS 33889 34395 . + 0 ID=cds-AC57_RS21940;Parent=gene-AC57_RS21940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AC57_RS21940;partial=true;product=peptide chain release factor H;pseudo=true;start_range=.,33889;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 34452 35909 . - . ID=gene-AC57_RS21935;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AC57_RS21935;old_locus_tag=AC57_0243 NZ_JJLR01000010.1 Protein Homology CDS 34452 35909 . - 0 ID=cds-WP_001293003.1;Parent=gene-AC57_RS21935;Dbxref=GenBank:WP_001293003.1;Name=WP_001293003.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=AC57_RS21935;product=cytosol nonspecific dipeptidase;protein_id=WP_001293003.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 36170 36628 . + . ID=gene-AC57_RS21930;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AC57_RS21930;old_locus_tag=AC57_0244 NZ_JJLR01000010.1 Protein Homology CDS 36170 36628 . + 0 ID=cds-WP_001291990.1;Parent=gene-AC57_RS21930;Dbxref=GenBank:WP_001291990.1;Name=WP_001291990.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AC57_RS21930;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 36720 37964 . + . ID=gene-AC57_RS21925;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AC57_RS21925;old_locus_tag=AC57_0245 NZ_JJLR01000010.1 Protein Homology CDS 36720 37964 . + 0 ID=cds-WP_000189541.1;Parent=gene-AC57_RS21925;Dbxref=GenBank:WP_000189541.1;Name=WP_000189541.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414774.1;locus_tag=AC57_RS21925;product=esterase FrsA;protein_id=WP_000189541.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 38022 38423 . + . ID=gene-AC57_RS21920;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AC57_RS21920;old_locus_tag=AC57_0246 NZ_JJLR01000010.1 Protein Homology CDS 38022 38423 . + 0 ID=cds-WP_000174689.1;Parent=gene-AC57_RS21920;Dbxref=GenBank:WP_000174689.1;Name=WP_000174689.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AC57_RS21920;product=sigma factor-binding protein Crl;protein_id=WP_000174689.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 38462 39517 . - . ID=gene-AC57_RS21915;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AC57_RS21915;old_locus_tag=AC57_0247 NZ_JJLR01000010.1 Protein Homology CDS 38462 39517 . - 0 ID=cds-WP_000749893.1;Parent=gene-AC57_RS21915;Dbxref=GenBank:WP_000749893.1;Name=WP_000749893.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308295.1;locus_tag=AC57_RS21915;product=phosphoporin PhoE;protein_id=WP_000749893.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 39805 40908 . + . ID=gene-AC57_RS21910;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AC57_RS21910;old_locus_tag=AC57_0248 NZ_JJLR01000010.1 Protein Homology CDS 39805 40908 . + 0 ID=cds-WP_001285288.1;Parent=gene-AC57_RS21910;Dbxref=GenBank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AC57_RS21910;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 40920 42173 . + . ID=gene-AC57_RS21905;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AC57_RS21905;old_locus_tag=AC57_0249 NZ_JJLR01000010.1 Protein Homology CDS 40920 42173 . + 0 ID=cds-WP_000893278.1;Parent=gene-AC57_RS21905;Dbxref=GenBank:WP_000893278.1;Name=WP_000893278.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414778.1;locus_tag=AC57_RS21905;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_000893278.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 42288 42363 . + . ID=gene-AC57_RS21900;Name=AC57_RS21900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS21900;old_locus_tag=AC57_0250 NZ_JJLR01000010.1 tRNAscan-SE tRNA 42288 42363 . + . ID=rna-AC57_RS21900;Parent=gene-AC57_RS21900;anticodon=(pos:42321..42323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS21900;product=tRNA-Thr NZ_JJLR01000010.1 tRNAscan-SE exon 42288 42363 . + . ID=exon-AC57_RS21900-1;Parent=rna-AC57_RS21900;anticodon=(pos:42321..42323);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS21900;product=tRNA-Thr NZ_JJLR01000010.1 RefSeq gene 42817 42999 . - . ID=gene-AC57_RS0123115;Name=AC57_RS0123115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123115 NZ_JJLR01000010.1 Protein Homology CDS 42817 42999 . - 0 ID=cds-WP_240743745.1;Parent=gene-AC57_RS0123115;Dbxref=GenBank:WP_240743745.1;Name=WP_240743745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000878752.1;locus_tag=AC57_RS0123115;product=hypothetical protein;protein_id=WP_240743745.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 43218 44303 . + . ID=gene-AC57_RS21895;Name=AC57_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21895;old_locus_tag=AC57_0251 NZ_JJLR01000010.1 Protein Homology CDS 43218 44303 . + 0 ID=cds-WP_032279694.1;Parent=gene-AC57_RS21895;Dbxref=GenBank:WP_032279694.1;Name=WP_032279694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724249.1;locus_tag=AC57_RS21895;product=DUF4297 domain-containing protein;protein_id=WP_032279694.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 44303 45955 . + . ID=gene-AC57_RS21890;Name=AC57_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21890;old_locus_tag=AC57_0252 NZ_JJLR01000010.1 Protein Homology CDS 44303 45955 . + 0 ID=cds-WP_032237310.1;Parent=gene-AC57_RS21890;Dbxref=GenBank:WP_032237310.1;Name=WP_032237310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000836622.1;locus_tag=AC57_RS21890;product=ATPase AAA;protein_id=WP_032237310.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 46257 47114 . - . ID=gene-AC57_RS21885;Name=AC57_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21885;old_locus_tag=AC57_0253 NZ_JJLR01000010.1 Protein Homology CDS 46257 47114 . - 0 ID=cds-WP_032237309.1;Parent=gene-AC57_RS21885;Dbxref=GenBank:WP_032237309.1;Name=WP_032237309.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001556896.1;locus_tag=AC57_RS21885;product=HNH endonuclease;protein_id=WP_032237309.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 47114 48562 . - . ID=gene-AC57_RS21880;Name=AC57_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21880;old_locus_tag=AC57_0254 NZ_JJLR01000010.1 Protein Homology CDS 47114 48562 . - 0 ID=cds-WP_248785409.1;Parent=gene-AC57_RS21880;Dbxref=GenBank:WP_248785409.1;Name=WP_248785409.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001543664.1;locus_tag=AC57_RS21880;product=AAA family ATPase;protein_id=WP_248785409.1;transl_table=11 NZ_JJLR01000010.1 RefSeq gene 48680 48872 . + . ID=gene-AC57_RS26405;Name=AC57_RS26405;end_range=48872,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26405;old_locus_tag=AC57_0255;partial=true NZ_JJLR01000010.1 Protein Homology CDS 48680 48872 . + 0 ID=cds-WP_001396889.1;Parent=gene-AC57_RS26405;Dbxref=GenBank:WP_001396889.1;Name=WP_001396889.1;Ontology_term=GO:0006313;end_range=48872,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26405;partial=true;product=IS1 family transposase;protein_id=WP_001396889.1;transl_table=11 ##sequence-region NZ_JJLR01000011.1 1 68944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000011.1 RefSeq region 1 68944 . + . ID=NZ_JJLR01000011.1:1..68944;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000011.1 RefSeq gene 1 200 . - . ID=gene-AC57_RS21875;Name=AC57_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21875;old_locus_tag=AC57_0256;partial=true;start_range=.,1 NZ_JJLR01000011.1 Protein Homology CDS 1 200 . - 0 ID=cds-WP_000179200.1;Parent=gene-AC57_RS21875;Dbxref=GenBank:WP_000179200.1;Name=WP_000179200.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS21875;partial=true;product=IS1 family transposase;protein_id=WP_000179200.1;start_range=.,1;transl_table=11 NZ_JJLR01000011.1 RefSeq pseudogene 249 3560 . + . ID=gene-AC57_RS0123125;Name=fdeC;gbkey=Gene;gene=fdeC;gene_biotype=pseudogene;locus_tag=AC57_RS0123125;old_locus_tag=AC57_0257;partial=true;pseudo=true;start_range=.,249 NZ_JJLR01000011.1 Protein Homology CDS 249 3560 . + 0 ID=cds-AC57_RS0123125;Parent=gene-AC57_RS0123125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=fdeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635811.1;locus_tag=AC57_RS0123125;partial=true;product=inverse autotransporter adhesin FdeC;pseudo=true;start_range=.,249;transl_table=11 NZ_JJLR01000011.1 RefSeq pseudogene 3700 4553 . - . ID=gene-AC57_RS0123130;Name=AC57_RS0123130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123130;pseudo=true NZ_JJLR01000011.1 Protein Homology CDS 3700 4553 . - 0 ID=cds-AC57_RS0123130;Parent=gene-AC57_RS0123130;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AC57_RS0123130;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000011.1 RefSeq pseudogene 4856 4984 . + . ID=gene-AC57_RS29570;Name=AC57_RS29570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29570;partial=true;pseudo=true;start_range=.,4856 NZ_JJLR01000011.1 Protein Homology CDS 4856 4984 . + 0 ID=cds-AC57_RS29570;Parent=gene-AC57_RS29570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AC57_RS29570;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,4856;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 5144 5737 . - . ID=gene-AC57_RS21870;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AC57_RS21870;old_locus_tag=AC57_0261 NZ_JJLR01000011.1 Protein Homology CDS 5144 5737 . - 0 ID=cds-WP_032279633.1;Parent=gene-AC57_RS21870;Dbxref=GenBank:WP_032279633.1;Name=WP_032279633.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AC57_RS21870;product=reactive chlorine species resistance protein RclC;protein_id=WP_032279633.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 5749 5985 . - . ID=gene-AC57_RS21865;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AC57_RS21865;old_locus_tag=AC57_0262 NZ_JJLR01000011.1 Protein Homology CDS 5749 5985 . - 0 ID=cds-WP_000474077.1;Parent=gene-AC57_RS21865;Dbxref=GenBank:WP_000474077.1;Name=WP_000474077.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AC57_RS21865;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_000474077.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 6094 7419 . - . ID=gene-AC57_RS21860;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AC57_RS21860;old_locus_tag=AC57_0263 NZ_JJLR01000011.1 Protein Homology CDS 6094 7419 . - 0 ID=cds-WP_001046307.1;Parent=gene-AC57_RS21860;Dbxref=GenBank:WP_001046307.1;Name=WP_001046307.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414838.2;locus_tag=AC57_RS21860;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_001046307.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 7645 8499 . + . ID=gene-AC57_RS21855;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AC57_RS21855;old_locus_tag=AC57_0264 NZ_JJLR01000011.1 Protein Homology CDS 7645 8499 . + 0 ID=cds-WP_000339594.1;Parent=gene-AC57_RS21855;Dbxref=GenBank:WP_000339594.1;Name=WP_000339594.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414839.1;locus_tag=AC57_RS21855;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339594.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 9026 9745 . + . ID=gene-AC57_RS21850;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AC57_RS21850;old_locus_tag=AC57_0266 NZ_JJLR01000011.1 Protein Homology CDS 9026 9745 . + 0 ID=cds-WP_001102108.1;Parent=gene-AC57_RS21850;Dbxref=GenBank:WP_001102108.1;Name=WP_001102108.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AC57_RS21850;product=(Fe-S)-binding protein;protein_id=WP_001102108.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 9756 11183 . + . ID=gene-AC57_RS21845;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AC57_RS21845;old_locus_tag=AC57_0267 NZ_JJLR01000011.1 Protein Homology CDS 9756 11183 . + 0 ID=cds-WP_000023927.1;Parent=gene-AC57_RS21845;Dbxref=GenBank:WP_000023927.1;Name=WP_000023927.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414841.1;locus_tag=AC57_RS21845;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_000023927.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 11176 11871 . + . ID=gene-AC57_RS21840;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AC57_RS21840;old_locus_tag=AC57_0268 NZ_JJLR01000011.1 Protein Homology CDS 11176 11871 . + 0 ID=cds-WP_032237665.1;Parent=gene-AC57_RS21840;Dbxref=GenBank:WP_032237665.1;Name=WP_032237665.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AC57_RS21840;product=LutC/YkgG family protein;protein_id=WP_032237665.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 12114 12782 . - . ID=gene-AC57_RS21830;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=AC57_RS21830;old_locus_tag=AC57_0270 NZ_JJLR01000011.1 Protein Homology CDS 12114 12782 . - 0 ID=cds-WP_032279632.1;Parent=gene-AC57_RS21830;Dbxref=GenBank:WP_032279632.1;Name=WP_032279632.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AC57_RS21830;product=protein YkgH;protein_id=WP_032279632.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 12995 14665 . - . ID=gene-AC57_RS21825;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AC57_RS21825;old_locus_tag=AC57_0271 NZ_JJLR01000011.1 Protein Homology CDS 12995 14665 . - 0 ID=cds-WP_001159094.1;Parent=gene-AC57_RS21825;Dbxref=GenBank:WP_001159094.1;Name=WP_001159094.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414845.1;locus_tag=AC57_RS21825;product=choline dehydrogenase;protein_id=WP_001159094.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 14679 16151 . - . ID=gene-AC57_RS21820;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AC57_RS21820;old_locus_tag=AC57_0272 NZ_JJLR01000011.1 Protein Homology CDS 14679 16151 . - 0 ID=cds-WP_000089110.1;Parent=gene-AC57_RS21820;Dbxref=GenBank:WP_000089110.1;Name=WP_000089110.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AC57_RS21820;product=betaine-aldehyde dehydrogenase;protein_id=WP_000089110.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 16165 16752 . - . ID=gene-AC57_RS21815;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AC57_RS21815;old_locus_tag=AC57_0273 NZ_JJLR01000011.1 Protein Homology CDS 16165 16752 . - 0 ID=cds-WP_001335745.1;Parent=gene-AC57_RS21815;Dbxref=GenBank:WP_001335745.1;Name=WP_001335745.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414847.3;locus_tag=AC57_RS21815;product=transcriptional regulator BetI;protein_id=WP_001335745.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 16881 18914 . + . ID=gene-AC57_RS21810;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AC57_RS21810;old_locus_tag=AC57_0274 NZ_JJLR01000011.1 Protein Homology CDS 16881 18914 . + 0 ID=cds-WP_032237667.1;Parent=gene-AC57_RS21810;Dbxref=GenBank:WP_032237667.1;Name=WP_032237667.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AC57_RS21810;product=choline BCCT transporter BetT;protein_id=WP_032237667.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 19220 19294 . + . ID=gene-AC57_RS29575;Name=AC57_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29575 NZ_JJLR01000011.1 Protein Homology CDS 19220 19294 . + 0 ID=cds-WP_120795374.1;Parent=gene-AC57_RS29575;Dbxref=GenBank:WP_120795374.1;Name=WP_120795374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518747.1;locus_tag=AC57_RS29575;product=protein YahV;protein_id=WP_120795374.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 19789 20877 . + . ID=gene-AC57_RS21805;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=AC57_RS21805;old_locus_tag=AC57_0275 NZ_JJLR01000011.1 Protein Homology CDS 19789 20877 . + 0 ID=cds-WP_032234341.1;Parent=gene-AC57_RS21805;Dbxref=GenBank:WP_032234341.1;Name=WP_032234341.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AC57_RS21805;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_032234341.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 20919 21851 . - . ID=gene-AC57_RS21800;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;locus_tag=AC57_RS21800;old_locus_tag=AC57_0276 NZ_JJLR01000011.1 Protein Homology CDS 20919 21851 . - 0 ID=cds-WP_001084399.1;Parent=gene-AC57_RS21800;Dbxref=GenBank:WP_001084399.1;Name=WP_001084399.1;gbkey=CDS;gene=yahB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AC57_RS21800;product=LysR substrate-binding domain-containing protein;protein_id=WP_001084399.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 21943 22440 . - . ID=gene-AC57_RS21795;Name=yahC;gbkey=Gene;gene=yahC;gene_biotype=protein_coding;locus_tag=AC57_RS21795;old_locus_tag=AC57_0277 NZ_JJLR01000011.1 Protein Homology CDS 21943 22440 . - 0 ID=cds-WP_001013892.1;Parent=gene-AC57_RS21795;Dbxref=GenBank:WP_001013892.1;Name=WP_001013892.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yahC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AC57_RS21795;product=DUF1097 domain-containing protein;protein_id=WP_001013892.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 22698 23303 . + . ID=gene-AC57_RS21790;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;locus_tag=AC57_RS21790;old_locus_tag=AC57_0278 NZ_JJLR01000011.1 Protein Homology CDS 22698 23303 . + 0 ID=cds-WP_000023635.1;Parent=gene-AC57_RS21790;Dbxref=GenBank:WP_000023635.1;Name=WP_000023635.1;Ontology_term=GO:0005515;gbkey=CDS;gene=yahD;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414852.1;locus_tag=AC57_RS21790;product=ankyrin repeat domain-containing protein;protein_id=WP_000023635.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 23343 24206 . + . ID=gene-AC57_RS21785;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;locus_tag=AC57_RS21785;old_locus_tag=AC57_0279 NZ_JJLR01000011.1 Protein Homology CDS 23343 24206 . + 0 ID=cds-WP_001310582.1;Parent=gene-AC57_RS21785;Dbxref=GenBank:WP_001310582.1;Name=WP_001310582.1;gbkey=CDS;gene=yahE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AC57_RS21785;product=DUF2877 domain-containing protein;protein_id=WP_001310582.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 24196 25743 . + . ID=gene-AC57_RS21780;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AC57_RS21780;old_locus_tag=AC57_0280 NZ_JJLR01000011.1 Protein Homology CDS 24196 25743 . + 0 ID=cds-WP_000111836.1;Parent=gene-AC57_RS21780;Dbxref=GenBank:WP_000111836.1;Name=WP_000111836.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AC57_RS21780;product=acyl-CoA synthetase FdrA;protein_id=WP_000111836.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 25743 27161 . + . ID=gene-AC57_RS21775;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;locus_tag=AC57_RS21775;old_locus_tag=AC57_0281 NZ_JJLR01000011.1 Protein Homology CDS 25743 27161 . + 0 ID=cds-WP_000083429.1;Parent=gene-AC57_RS21775;Dbxref=GenBank:WP_000083429.1;Name=WP_000083429.1;gbkey=CDS;gene=yahG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AC57_RS21775;product=DUF1116 domain-containing protein;protein_id=WP_000083429.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 27211 27507 . + . ID=gene-AC57_RS21770;Name=yahH;gbkey=Gene;gene=yahH;gene_biotype=protein_coding;locus_tag=AC57_RS21770;old_locus_tag=AC57_0282 NZ_JJLR01000011.1 GeneMarkS-2+ CDS 27211 27507 . + 0 ID=cds-WP_001295687.1;Parent=gene-AC57_RS21770;Dbxref=GenBank:WP_001295687.1;Name=WP_001295687.1;gbkey=CDS;gene=yahH;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS21770;product=protein YahH;protein_id=WP_001295687.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 27583 28533 . + . ID=gene-AC57_RS21765;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=AC57_RS21765;old_locus_tag=AC57_0283 NZ_JJLR01000011.1 Protein Homology CDS 27583 28533 . + 0 ID=cds-WP_000661672.1;Parent=gene-AC57_RS21765;Dbxref=GenBank:WP_000661672.1;Name=WP_000661672.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AC57_RS21765;product=carbamate kinase family protein;protein_id=WP_000661672.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 28543 29925 . + . ID=gene-AC57_RS21760;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=protein_coding;locus_tag=AC57_RS21760;old_locus_tag=AC57_0284 NZ_JJLR01000011.1 Protein Homology CDS 28543 29925 . + 0 ID=cds-WP_000665120.1;Parent=gene-AC57_RS21760;Dbxref=GenBank:WP_000665120.1;Name=WP_000665120.1;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AC57_RS21760;product=amidohydrolase family protein;protein_id=WP_000665120.1;transl_table=11 NZ_JJLR01000011.1 RefSeq pseudogene 30141 30215 . + . ID=gene-AC57_RS30605;Name=AC57_RS30605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30605;partial=true;pseudo=true;start_range=.,30141 NZ_JJLR01000011.1 Protein Homology CDS 30141 30215 . + 0 ID=cds-AC57_RS30605;Parent=gene-AC57_RS30605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308405.1;locus_tag=AC57_RS30605;partial=true;product=hypothetical protein;pseudo=true;start_range=.,30141;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 30302 31351 . + . ID=gene-AC57_RS21755;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AC57_RS21755;old_locus_tag=AC57_0285 NZ_JJLR01000011.1 Protein Homology CDS 30302 31351 . + 0 ID=cds-WP_001459488.1;Parent=gene-AC57_RS21755;Dbxref=GenBank:WP_001459488.1;Name=WP_001459488.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414859.1;locus_tag=AC57_RS21755;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_001459488.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 31594 32409 . + . ID=gene-AC57_RS21750;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=AC57_RS21750;old_locus_tag=AC57_0286 NZ_JJLR01000011.1 Protein Homology CDS 31594 32409 . + 0 ID=cds-WP_001299012.1;Parent=gene-AC57_RS21750;Dbxref=GenBank:WP_001299012.1;Name=WP_001299012.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414860.1;locus_tag=AC57_RS21750;product=protein YahL;protein_id=WP_001299012.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 32822 33067 . + . ID=gene-AC57_RS0123140;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=AC57_RS0123140 NZ_JJLR01000011.1 Protein Homology CDS 32822 33067 . + 0 ID=cds-WP_000290616.1;Parent=gene-AC57_RS0123140;Dbxref=GenBank:WP_000290616.1;Name=WP_000290616.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AC57_RS0123140;product=protein YahM;protein_id=WP_000290616.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 33060 33755 . - . ID=gene-AC57_RS21745;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AC57_RS21745;old_locus_tag=AC57_0289 NZ_JJLR01000011.1 Protein Homology CDS 33060 33755 . - 0 ID=cds-WP_077756404.1;Parent=gene-AC57_RS21745;Dbxref=GenBank:WP_077756404.1;Name=WP_077756404.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AC57_RS21745;product=LysE family transporter;protein_id=WP_077756404.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 33902 34177 . + . ID=gene-AC57_RS21740;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AC57_RS21740;old_locus_tag=AC57_0290 NZ_JJLR01000011.1 Protein Homology CDS 33902 34177 . + 0 ID=cds-WP_000691956.1;Parent=gene-AC57_RS21740;Dbxref=GenBank:WP_000691956.1;Name=WP_000691956.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414863.1;locus_tag=AC57_RS21740;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691956.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 34275 35861 . - . ID=gene-AC57_RS21735;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AC57_RS21735;old_locus_tag=AC57_0292 NZ_JJLR01000011.1 Protein Homology CDS 34275 35861 . - 0 ID=cds-WP_000941041.1;Parent=gene-AC57_RS21735;Dbxref=GenBank:WP_000941041.1;Name=WP_000941041.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414864.1;locus_tag=AC57_RS21735;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_000941041.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 36100 36990 . + . ID=gene-AC57_RS21730;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AC57_RS21730;old_locus_tag=AC57_0293 NZ_JJLR01000011.1 Protein Homology CDS 36100 36990 . + 0 ID=cds-WP_000052206.1;Parent=gene-AC57_RS21730;Dbxref=GenBank:WP_000052206.1;Name=WP_000052206.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414865.1;locus_tag=AC57_RS21730;product=methylisocitrate lyase;protein_id=WP_000052206.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 36936 37661 . - . ID=gene-AC57_RS29580;Name=AC57_RS29580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29580 NZ_JJLR01000011.1 GeneMarkS-2+ CDS 36936 37661 . - 0 ID=cds-WP_148725143.1;Parent=gene-AC57_RS29580;Dbxref=GenBank:WP_148725143.1;Name=WP_148725143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS29580;product=hypothetical protein;protein_id=WP_148725143.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 37709 38878 . + . ID=gene-AC57_RS21725;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AC57_RS21725;old_locus_tag=AC57_0294 NZ_JJLR01000011.1 Protein Homology CDS 37709 38878 . + 0 ID=cds-WP_001285927.1;Parent=gene-AC57_RS21725;Dbxref=GenBank:WP_001285927.1;Name=WP_001285927.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414867.1;locus_tag=AC57_RS21725;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285927.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 38912 40363 . + . ID=gene-AC57_RS21720;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AC57_RS21720;old_locus_tag=AC57_0295 NZ_JJLR01000011.1 Protein Homology CDS 38912 40363 . + 0 ID=cds-WP_001275859.1;Parent=gene-AC57_RS21720;Dbxref=GenBank:WP_001275859.1;Name=WP_001275859.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414868.1;locus_tag=AC57_RS21720;product=2-methylcitrate dehydratase;protein_id=WP_001275859.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 40403 42289 . + . ID=gene-AC57_RS21715;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AC57_RS21715;old_locus_tag=AC57_0296 NZ_JJLR01000011.1 Protein Homology CDS 40403 42289 . + 0 ID=cds-WP_000010285.1;Parent=gene-AC57_RS21715;Dbxref=GenBank:WP_000010285.1;Name=WP_000010285.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414869.1;locus_tag=AC57_RS21715;product=propionate--CoA ligase;protein_id=WP_000010285.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 42525 43784 . + . ID=gene-AC57_RS21710;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AC57_RS21710;old_locus_tag=AC57_0297 NZ_JJLR01000011.1 Protein Homology CDS 42525 43784 . + 0 ID=cds-WP_000076233.1;Parent=gene-AC57_RS21710;Dbxref=GenBank:WP_000076233.1;Name=WP_000076233.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AC57_RS21710;product=cytosine permease;protein_id=WP_000076233.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 43774 45057 . + . ID=gene-AC57_RS21705;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AC57_RS21705;old_locus_tag=AC57_0298 NZ_JJLR01000011.1 Protein Homology CDS 43774 45057 . + 0 ID=cds-WP_032237723.1;Parent=gene-AC57_RS21705;Dbxref=GenBank:WP_032237723.1;Name=WP_032237723.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AC57_RS21705;product=cytosine/isoguanine deaminase;protein_id=WP_032237723.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 45594 46493 . - . ID=gene-AC57_RS21700;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AC57_RS21700;old_locus_tag=AC57_0299 NZ_JJLR01000011.1 Protein Homology CDS 45594 46493 . - 0 ID=cds-WP_000952503.1;Parent=gene-AC57_RS21700;Dbxref=GenBank:WP_000952503.1;Name=WP_000952503.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414872.3;locus_tag=AC57_RS21700;product=transcriptional regulator CynR;protein_id=WP_000952503.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 46602 47261 . + . ID=gene-AC57_RS21695;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AC57_RS21695;old_locus_tag=AC57_0300 NZ_JJLR01000011.1 Protein Homology CDS 46602 47261 . + 0 ID=cds-WP_000658652.1;Parent=gene-AC57_RS21695;Dbxref=GenBank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AC57_RS21695;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 47292 47762 . + . ID=gene-AC57_RS21690;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AC57_RS21690;old_locus_tag=AC57_0301 NZ_JJLR01000011.1 Protein Homology CDS 47292 47762 . + 0 ID=cds-WP_000616243.1;Parent=gene-AC57_RS21690;Dbxref=GenBank:WP_000616243.1;Name=WP_000616243.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414874.1;locus_tag=AC57_RS21690;product=cyanase;protein_id=WP_000616243.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 47768 48949 . + . ID=gene-AC57_RS21685;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AC57_RS21685;old_locus_tag=AC57_0302 NZ_JJLR01000011.1 Protein Homology CDS 47768 48949 . + 0 ID=cds-WP_001333494.1;Parent=gene-AC57_RS21685;Dbxref=GenBank:WP_001333494.1;Name=WP_001333494.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AC57_RS21685;product=cyanate transporter CynX;protein_id=WP_001333494.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 49052 49663 . - . ID=gene-AC57_RS21680;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AC57_RS21680;old_locus_tag=AC57_0303 NZ_JJLR01000011.1 Protein Homology CDS 49052 49663 . - 0 ID=cds-WP_032279634.1;Parent=gene-AC57_RS21680;Dbxref=GenBank:WP_032279634.1;Name=WP_032279634.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414876.1;locus_tag=AC57_RS21680;product=galactoside O-acetyltransferase;protein_id=WP_032279634.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 49729 50982 . - . ID=gene-AC57_RS21675;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AC57_RS21675;old_locus_tag=AC57_0304 NZ_JJLR01000011.1 Protein Homology CDS 49729 50982 . - 0 ID=cds-WP_000291549.1;Parent=gene-AC57_RS21675;Dbxref=GenBank:WP_000291549.1;Name=WP_000291549.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414877.1;locus_tag=AC57_RS21675;product=lactose permease;protein_id=WP_000291549.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 51034 54108 . - . ID=gene-AC57_RS21670;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AC57_RS21670;old_locus_tag=AC57_0305 NZ_JJLR01000011.1 Protein Homology CDS 51034 54108 . - 0 ID=cds-WP_032237724.1;Parent=gene-AC57_RS21670;Dbxref=GenBank:WP_032237724.1;Name=WP_032237724.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308424.1;locus_tag=AC57_RS21670;product=beta-galactosidase;protein_id=WP_032237724.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 54231 55313 . - . ID=gene-AC57_RS21665;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AC57_RS21665;old_locus_tag=AC57_0306 NZ_JJLR01000011.1 Protein Homology CDS 54231 55313 . - 0 ID=cds-WP_000805885.1;Parent=gene-AC57_RS21665;Dbxref=GenBank:WP_000805885.1;Name=WP_000805885.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AC57_RS21665;product=DNA-binding transcriptional repressor LacI;protein_id=WP_000805885.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 55390 56223 . - . ID=gene-AC57_RS21660;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AC57_RS21660;old_locus_tag=AC57_0307 NZ_JJLR01000011.1 Protein Homology CDS 55390 56223 . - 0 ID=cds-WP_001306931.1;Parent=gene-AC57_RS21660;Dbxref=GenBank:WP_001306931.1;Name=WP_001306931.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AC57_RS21660;product=DNA-binding transcriptional regulator;protein_id=WP_001306931.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 56414 58078 . + . ID=gene-AC57_RS21655;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AC57_RS21655;old_locus_tag=AC57_0308 NZ_JJLR01000011.1 Protein Homology CDS 56414 58078 . + 0 ID=cds-WP_032279629.1;Parent=gene-AC57_RS21655;Dbxref=GenBank:WP_032279629.1;Name=WP_032279629.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308429.1;locus_tag=AC57_RS21655;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_032279629.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 58080 59024 . + . ID=gene-AC57_RS21650;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AC57_RS21650;old_locus_tag=AC57_0309 NZ_JJLR01000011.1 Protein Homology CDS 58080 59024 . + 0 ID=cds-WP_000543457.1;Parent=gene-AC57_RS21650;Dbxref=GenBank:WP_000543457.1;Name=WP_000543457.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AC57_RS21650;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_000543457.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 59042 59908 . + . ID=gene-AC57_RS21645;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AC57_RS21645;old_locus_tag=AC57_0310 NZ_JJLR01000011.1 Protein Homology CDS 59042 59908 . + 0 ID=cds-WP_000121898.1;Parent=gene-AC57_RS21645;Dbxref=GenBank:WP_000121898.1;Name=WP_000121898.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414883.5;locus_tag=AC57_RS21645;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121898.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 59918 60727 . + . ID=gene-AC57_RS21640;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AC57_RS21640;old_locus_tag=AC57_0311 NZ_JJLR01000011.1 Protein Homology CDS 59918 60727 . + 0 ID=cds-WP_000160710.1;Parent=gene-AC57_RS21640;Dbxref=GenBank:WP_000160710.1;Name=WP_000160710.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414884.2;locus_tag=AC57_RS21640;product=2-keto-4-pentenoate hydratase;protein_id=WP_000160710.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 60724 61674 . + . ID=gene-AC57_RS21635;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AC57_RS21635;old_locus_tag=AC57_0312 NZ_JJLR01000011.1 Protein Homology CDS 60724 61674 . + 0 ID=cds-WP_000044314.1;Parent=gene-AC57_RS21635;Dbxref=GenBank:WP_000044314.1;Name=WP_000044314.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414885.1;locus_tag=AC57_RS21635;product=acetaldehyde dehydrogenase;protein_id=WP_000044314.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 61671 62684 . + . ID=gene-AC57_RS21630;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AC57_RS21630;old_locus_tag=AC57_0313 NZ_JJLR01000011.1 Protein Homology CDS 61671 62684 . + 0 ID=cds-WP_032237726.1;Parent=gene-AC57_RS21630;Dbxref=GenBank:WP_032237726.1;Name=WP_032237726.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AC57_RS21630;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_032237726.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 63062 64273 . + . ID=gene-AC57_RS21625;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AC57_RS21625;old_locus_tag=AC57_0314 NZ_JJLR01000011.1 Protein Homology CDS 63062 64273 . + 0 ID=cds-WP_000107623.1;Parent=gene-AC57_RS21625;Dbxref=GenBank:WP_000107623.1;Name=WP_000107623.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414887.2;locus_tag=AC57_RS21625;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_000107623.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 64375 64914 . + . ID=gene-AC57_RS21620;Name=yaiL;gbkey=Gene;gene=yaiL;gene_biotype=protein_coding;locus_tag=AC57_RS21620;old_locus_tag=AC57_0315 NZ_JJLR01000011.1 Protein Homology CDS 64375 64914 . + 0 ID=cds-WP_001096705.1;Parent=gene-AC57_RS21620;Dbxref=GenBank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;gene=yaiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AC57_RS21620;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 65140 65973 . - . ID=gene-AC57_RS21615;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AC57_RS21615;old_locus_tag=AC57_0316 NZ_JJLR01000011.1 Protein Homology CDS 65140 65973 . - 0 ID=cds-WP_000419042.1;Parent=gene-AC57_RS21615;Dbxref=GenBank:WP_000419042.1;Name=WP_000419042.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414889.1;locus_tag=AC57_RS21615;product=S-formylglutathione hydrolase;protein_id=WP_000419042.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 66065 67174 . - . ID=gene-AC57_RS21610;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AC57_RS21610;old_locus_tag=AC57_0317 NZ_JJLR01000011.1 Protein Homology CDS 66065 67174 . - 0 ID=cds-WP_000842102.1;Parent=gene-AC57_RS21610;Dbxref=GenBank:WP_000842102.1;Name=WP_000842102.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AC57_RS21610;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_000842102.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 67209 67484 . - . ID=gene-AC57_RS21605;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AC57_RS21605;old_locus_tag=AC57_0318 NZ_JJLR01000011.1 Protein Homology CDS 67209 67484 . - 0 ID=cds-WP_001141271.1;Parent=gene-AC57_RS21605;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AC57_RS21605;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 67672 68445 . - . ID=gene-AC57_RS21600;Name=yaiO;gbkey=Gene;gene=yaiO;gene_biotype=protein_coding;locus_tag=AC57_RS21600;old_locus_tag=AC57_0319 NZ_JJLR01000011.1 Protein Homology CDS 67672 68445 . - 0 ID=cds-WP_000597113.1;Parent=gene-AC57_RS21600;Dbxref=GenBank:WP_000597113.1;Name=WP_000597113.1;gbkey=CDS;gene=yaiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414892.1;locus_tag=AC57_RS21600;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_000597113.1;transl_table=11 NZ_JJLR01000011.1 RefSeq pseudogene 68447 68701 . - . ID=gene-AC57_RS21595;Name=AC57_RS21595;end_range=68701,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS21595;old_locus_tag=AC57_0320;partial=true;pseudo=true NZ_JJLR01000011.1 Protein Homology CDS 68447 68701 . - 0 ID=cds-AC57_RS21595;Parent=gene-AC57_RS21595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=68701,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020231914.1;locus_tag=AC57_RS21595;partial=true;product=acetyltransferase;pseudo=true;transl_table=11 NZ_JJLR01000011.1 RefSeq gene 68719 68944 . - . ID=gene-AC57_RS21590;Name=AC57_RS21590;end_range=68944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21590;old_locus_tag=AC57_0321;partial=true NZ_JJLR01000011.1 Protein Homology CDS 68719 68944 . - 1 ID=cds-WP_024169623.1;Parent=gene-AC57_RS21590;Dbxref=GenBank:WP_024169623.1;Name=WP_024169623.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=68944,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS21590;partial=true;product=IS1 family transposase;protein_id=WP_024169623.1;transl_table=11 ##sequence-region NZ_JJLR01000012.1 1 1460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000012.1 RefSeq region 1 1460 . + . ID=NZ_JJLR01000012.1:1..1460;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000012.1 RefSeq gene 1 199 . - . ID=gene-AC57_RS21585;Name=AC57_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21585;old_locus_tag=AC57_0322;partial=true;start_range=.,1 NZ_JJLR01000012.1 Protein Homology CDS 1 199 . - 0 ID=cds-WP_000179198.1;Parent=gene-AC57_RS21585;Dbxref=GenBank:WP_000179198.1;Name=WP_000179198.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS21585;partial=true;product=IS1 family transposase;protein_id=WP_000179198.1;start_range=.,1;transl_table=11 NZ_JJLR01000012.1 RefSeq pseudogene 255 587 . - . ID=gene-AC57_RS26440;Name=AC57_RS26440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26440;partial=true;pseudo=true;start_range=.,255 NZ_JJLR01000012.1 Protein Homology CDS 255 587 . - 0 ID=cds-AC57_RS26440;Parent=gene-AC57_RS26440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001308433.1;locus_tag=AC57_RS26440;partial=true;product=acetyltransferase;pseudo=true;start_range=.,255;transl_table=11 NZ_JJLR01000012.1 RefSeq pseudogene 565 1197 . - . ID=gene-AC57_RS30160;Name=AC57_RS30160;end_range=1197,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30160;old_locus_tag=AC57_0324;partial=true;pseudo=true NZ_JJLR01000012.1 Protein Homology CDS 565 1197 . - 0 ID=cds-AC57_RS30160;Parent=gene-AC57_RS30160;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006486,GO:0016757;end_range=1197,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414897.1;locus_tag=AC57_RS30160;partial=true;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_JJLR01000012.1 RefSeq gene 1245 1460 . + . ID=gene-AC57_RS26450;Name=AC57_RS26450;end_range=1460,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26450;old_locus_tag=AC57_0325;partial=true NZ_JJLR01000012.1 Protein Homology CDS 1245 1460 . + 0 ID=cds-WP_001395569.1;Parent=gene-AC57_RS26450;Dbxref=GenBank:WP_001395569.1;Name=WP_001395569.1;Ontology_term=GO:0006313;end_range=1460,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26450;partial=true;product=IS1 family transposase;protein_id=WP_001395569.1;transl_table=11 ##sequence-region NZ_JJLR01000013.1 1 129829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000013.1 RefSeq region 1 129829 . + . ID=NZ_JJLR01000013.1:1..129829;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000013.1 RefSeq gene 1 212 . + . ID=gene-AC57_RS21570;Name=AC57_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21570;old_locus_tag=AC57_0326;partial=true;start_range=.,1 NZ_JJLR01000013.1 Protein Homology CDS 1 212 . + 2 ID=cds-WP_000129488.1;Parent=gene-AC57_RS21570;Dbxref=GenBank:WP_000129488.1;Name=WP_000129488.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC57_RS21570;partial=true;product=IS1 family transposase;protein_id=WP_000129488.1;start_range=.,1;transl_table=11 NZ_JJLR01000013.1 RefSeq pseudogene 721 1683 . + . ID=gene-AC57_RS21565;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=pseudogene;locus_tag=AC57_RS21565;old_locus_tag=AC57_0327;pseudo=true NZ_JJLR01000013.1 Protein Homology CDS 721 1683 . + 0 ID=cds-AC57_RS21565;Parent=gene-AC57_RS21565;Note=internal stop;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AC57_RS21565;product=taurine ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 1696 2427 . + . ID=gene-AC57_RS21560;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AC57_RS21560;old_locus_tag=AC57_0328 NZ_JJLR01000013.1 Protein Homology CDS 1696 2427 . + 0 ID=cds-WP_050440065.1;Parent=gene-AC57_RS21560;Dbxref=GenBank:WP_050440065.1;Name=WP_050440065.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308447.1;locus_tag=AC57_RS21560;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_050440065.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 2460 3287 . + . ID=gene-AC57_RS21555;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AC57_RS21555;old_locus_tag=AC57_0329 NZ_JJLR01000013.1 Protein Homology CDS 2460 3287 . + 0 ID=cds-WP_000114587.1;Parent=gene-AC57_RS21555;Dbxref=GenBank:WP_000114587.1;Name=WP_000114587.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706205.1;locus_tag=AC57_RS21555;product=taurine ABC transporter permease TauC;protein_id=WP_000114587.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 3284 4135 . + . ID=gene-AC57_RS21550;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AC57_RS21550;old_locus_tag=AC57_0330 NZ_JJLR01000013.1 Protein Homology CDS 3284 4135 . + 0 ID=cds-WP_000004049.1;Parent=gene-AC57_RS21550;Dbxref=GenBank:WP_000004049.1;Name=WP_000004049.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=AC57_RS21550;product=taurine dioxygenase;protein_id=WP_000004049.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 4241 5215 . - . ID=gene-AC57_RS21545;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AC57_RS21545;old_locus_tag=AC57_0331 NZ_JJLR01000013.1 Protein Homology CDS 4241 5215 . - 0 ID=cds-WP_001295337.1;Parent=gene-AC57_RS21545;Dbxref=GenBank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AC57_RS21545;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 5738 8716 . + . ID=gene-AC57_RS21540;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=AC57_RS21540;old_locus_tag=AC57_0332 NZ_JJLR01000013.1 Protein Homology CDS 5738 8716 . + 0 ID=cds-WP_032279448.1;Parent=gene-AC57_RS21540;Dbxref=GenBank:WP_032279448.1;Name=WP_032279448.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308451.1;locus_tag=AC57_RS21540;product=autotransporter adhesin EhaB;protein_id=WP_032279448.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 8804 9427 . + . ID=gene-AC57_RS21535;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AC57_RS21535;old_locus_tag=AC57_0333 NZ_JJLR01000013.1 Protein Homology CDS 8804 9427 . + 0 ID=cds-WP_001295817.1;Parent=gene-AC57_RS21535;Dbxref=GenBank:WP_001295817.1;Name=WP_001295817.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AC57_RS21535;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_001295817.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 9428 10585 . - . ID=gene-AC57_RS21530;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AC57_RS21530;old_locus_tag=AC57_0334 NZ_JJLR01000013.1 Protein Homology CDS 9428 10585 . - 0 ID=cds-WP_000830738.1;Parent=gene-AC57_RS21530;Dbxref=GenBank:WP_000830738.1;Name=WP_000830738.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AC57_RS21530;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830738.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 10937 12157 . + . ID=gene-AC57_RS21525;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AC57_RS21525;old_locus_tag=AC57_0335 NZ_JJLR01000013.1 Protein Homology CDS 10937 12157 . + 0 ID=cds-WP_000477009.1;Parent=gene-AC57_RS21525;Dbxref=GenBank:WP_000477009.1;Name=WP_000477009.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706191.2;locus_tag=AC57_RS21525;product=peptide antibiotic transporter SbmA;protein_id=WP_000477009.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 12170 13264 . + . ID=gene-AC57_RS21520;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AC57_RS21520;old_locus_tag=AC57_0336 NZ_JJLR01000013.1 Protein Homology CDS 12170 13264 . + 0 ID=cds-WP_032237793.1;Parent=gene-AC57_RS21520;Dbxref=GenBank:WP_032237793.1;Name=WP_032237793.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706190.1;locus_tag=AC57_RS21520;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_032237793.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 13323 13631 . - . ID=gene-AC57_RS21515;Name=yaiY;gbkey=Gene;gene=yaiY;gene_biotype=protein_coding;locus_tag=AC57_RS21515;old_locus_tag=AC57_0337 NZ_JJLR01000013.1 Protein Homology CDS 13323 13631 . - 0 ID=cds-WP_000763151.1;Parent=gene-AC57_RS21515;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;gene=yaiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AC57_RS21515;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 13891 14103 . + . ID=gene-AC57_RS29585;Name=yaiZ;gbkey=Gene;gene=yaiZ;gene_biotype=protein_coding;locus_tag=AC57_RS29585;old_locus_tag=AC57_0338 NZ_JJLR01000013.1 Protein Homology CDS 13891 14103 . + 0 ID=cds-WP_001295334.1;Parent=gene-AC57_RS29585;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;gene=yaiZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AC57_RS29585;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 14127 15221 . - . ID=gene-AC57_RS21505;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AC57_RS21505;old_locus_tag=AC57_0339 NZ_JJLR01000013.1 Protein Homology CDS 14127 15221 . - 0 ID=cds-WP_032237792.1;Parent=gene-AC57_RS21505;Dbxref=GenBank:WP_032237792.1;Name=WP_032237792.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AC57_RS21505;product=D-alanine--D-alanine ligase;protein_id=WP_032237792.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 15299 15502 . + . ID=gene-AC57_RS30165;Name=AC57_RS30165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30165 NZ_JJLR01000013.1 Protein Homology CDS 15299 15502 . + 0 ID=cds-WP_001300163.1;Parent=gene-AC57_RS30165;Dbxref=GenBank:WP_001300163.1;Name=WP_001300163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AC57_RS30165;product=hypothetical protein;protein_id=WP_001300163.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 15684 15944 . + . ID=gene-AC57_RS21500;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AC57_RS21500;old_locus_tag=AC57_0340 NZ_JJLR01000013.1 Protein Homology CDS 15684 15944 . + 0 ID=cds-WP_000792970.1;Parent=gene-AC57_RS21500;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AC57_RS21500;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 16045 17460 . + . ID=gene-AC57_RS21495;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AC57_RS21495;old_locus_tag=AC57_0341 NZ_JJLR01000013.1 Protein Homology CDS 16045 17460 . + 0 ID=cds-WP_001351635.1;Parent=gene-AC57_RS21495;Dbxref=GenBank:WP_001351635.1;Name=WP_001351635.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AC57_RS21495;product=alkaline phosphatase;protein_id=WP_001351635.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 17579 17899 . + . ID=gene-AC57_RS21490;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AC57_RS21490;old_locus_tag=AC57_0342 NZ_JJLR01000013.1 Protein Homology CDS 17579 17899 . + 0 ID=cds-WP_001295332.1;Parent=gene-AC57_RS21490;Dbxref=GenBank:WP_001295332.1;Name=WP_001295332.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AC57_RS21490;product=phosphate starvation-inducible protein PsiF;protein_id=WP_001295332.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 18001 19116 . + . ID=gene-AC57_RS21485;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AC57_RS21485;old_locus_tag=AC57_0343 NZ_JJLR01000013.1 Protein Homology CDS 18001 19116 . + 0 ID=cds-WP_000484048.1;Parent=gene-AC57_RS21485;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AC57_RS21485;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 19133 19942 . - . ID=gene-AC57_RS21480;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AC57_RS21480;old_locus_tag=AC57_0344 NZ_JJLR01000013.1 Protein Homology CDS 19133 19942 . - 0 ID=cds-WP_001295331.1;Parent=gene-AC57_RS21480;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AC57_RS21480;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 20062 20526 . + . ID=gene-AC57_RS21475;Name=yaiI;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=AC57_RS21475;old_locus_tag=AC57_0345 NZ_JJLR01000013.1 Protein Homology CDS 20062 20526 . + 0 ID=cds-WP_000158153.1;Parent=gene-AC57_RS21475;Dbxref=GenBank:WP_000158153.1;Name=WP_000158153.1;gbkey=CDS;gene=yaiI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619195.1;locus_tag=AC57_RS21475;product=YaiI/YqxD family protein;protein_id=WP_000158153.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 20703 21227 . + . ID=gene-AC57_RS21470;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AC57_RS21470;old_locus_tag=AC57_0346 NZ_JJLR01000013.1 Protein Homology CDS 20703 21227 . + 0 ID=cds-WP_000193393.1;Parent=gene-AC57_RS21470;Dbxref=GenBank:WP_000193393.1;Name=WP_000193393.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AC57_RS21470;product=shikimate kinase AroL;protein_id=WP_000193393.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 21277 21468 . + . ID=gene-AC57_RS21465;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AC57_RS21465;old_locus_tag=AC57_0347 NZ_JJLR01000013.1 Protein Homology CDS 21277 21468 . + 0 ID=cds-WP_001142439.1;Parent=gene-AC57_RS21465;Dbxref=GenBank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AC57_RS21465;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 21726 22403 . + . ID=gene-AC57_RS21460;Name=aroM;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=AC57_RS21460;old_locus_tag=AC57_0348 NZ_JJLR01000013.1 Protein Homology CDS 21726 22403 . + 0 ID=cds-WP_001276420.1;Parent=gene-AC57_RS21460;Dbxref=GenBank:WP_001276420.1;Name=WP_001276420.1;gbkey=CDS;gene=aroM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414924.1;locus_tag=AC57_RS21460;product=AroM family protein;protein_id=WP_001276420.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 22475 22759 . + . ID=gene-AC57_RS21455;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AC57_RS21455;old_locus_tag=AC57_0349 NZ_JJLR01000013.1 Protein Homology CDS 22475 22759 . + 0 ID=cds-WP_000941942.1;Parent=gene-AC57_RS21455;Dbxref=GenBank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AC57_RS21455;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11 NZ_JJLR01000013.1 RefSeq pseudogene 22907 23248 . + . ID=gene-AC57_RS21450;Name=AC57_RS21450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS21450;old_locus_tag=AC57_0350;partial=true;pseudo=true;start_range=.,22907 NZ_JJLR01000013.1 Protein Homology CDS 22907 23248 . + 0 ID=cds-AC57_RS21450;Parent=gene-AC57_RS21450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AC57_RS21450;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,22907;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 23245 23328 . + . ID=gene-AC57_RS29590;Name=AC57_RS29590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29590 NZ_JJLR01000013.1 Protein Homology CDS 23245 23328 . + 0 ID=cds-WP_120795376.1;Parent=gene-AC57_RS29590;Dbxref=GenBank:WP_120795376.1;Name=WP_120795376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518750.1;locus_tag=AC57_RS29590;product=protein YkiD;protein_id=WP_120795376.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 23406 24317 . - . ID=gene-AC57_RS21445;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AC57_RS21445;old_locus_tag=AC57_0351 NZ_JJLR01000013.1 Protein Homology CDS 23406 24317 . - 0 ID=cds-WP_001298537.1;Parent=gene-AC57_RS21445;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AC57_RS21445;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 24442 25350 . + . ID=gene-AC57_RS21440;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AC57_RS21440;old_locus_tag=AC57_0352 NZ_JJLR01000013.1 Protein Homology CDS 24442 25350 . + 0 ID=cds-WP_001219309.1;Parent=gene-AC57_RS21440;Dbxref=GenBank:WP_001219309.1;Name=WP_001219309.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414928.2;locus_tag=AC57_RS21440;product=fructokinase;protein_id=WP_001219309.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 25493 26677 . - . ID=gene-AC57_RS21435;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AC57_RS21435;old_locus_tag=AC57_0354 NZ_JJLR01000013.1 Protein Homology CDS 25493 26677 . - 0 ID=cds-WP_001326926.1;Parent=gene-AC57_RS21435;Dbxref=GenBank:WP_001326926.1;Name=WP_001326926.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AC57_RS21435;product=MFS transporter AraJ;protein_id=WP_001326926.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 26803 29949 . - . ID=gene-AC57_RS21430;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AC57_RS21430;old_locus_tag=AC57_0355 NZ_JJLR01000013.1 Protein Homology CDS 26803 29949 . - 0 ID=cds-WP_032237078.1;Parent=gene-AC57_RS21430;Dbxref=GenBank:WP_032237078.1;Name=WP_032237078.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414931.1;locus_tag=AC57_RS21430;product=exonuclease subunit SbcC;protein_id=WP_032237078.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 29946 31148 . - . ID=gene-AC57_RS21425;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AC57_RS21425;old_locus_tag=AC57_0356 NZ_JJLR01000013.1 Protein Homology CDS 29946 31148 . - 0 ID=cds-WP_001221318.1;Parent=gene-AC57_RS21425;Dbxref=GenBank:WP_001221318.1;Name=WP_001221318.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AC57_RS21425;product=exonuclease subunit SbcD;protein_id=WP_001221318.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 31338 32027 . + . ID=gene-AC57_RS21420;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AC57_RS21420;old_locus_tag=AC57_0358 NZ_JJLR01000013.1 Protein Homology CDS 31338 32027 . + 0 ID=cds-WP_000113933.1;Parent=gene-AC57_RS21420;Dbxref=GenBank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AC57_RS21420;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 32085 33380 . + . ID=gene-AC57_RS21415;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AC57_RS21415;old_locus_tag=AC57_0359 NZ_JJLR01000013.1 Protein Homology CDS 32085 33380 . + 0 ID=cds-WP_032246219.1;Parent=gene-AC57_RS21415;Dbxref=GenBank:WP_032246219.1;Name=WP_032246219.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414934.1;locus_tag=AC57_RS21415;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_032246219.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 33787 35106 . + . ID=gene-AC57_RS21410;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AC57_RS21410;old_locus_tag=AC57_0361 NZ_JJLR01000013.1 Protein Homology CDS 33787 35106 . + 0 ID=cds-WP_000149639.1;Parent=gene-AC57_RS21410;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AC57_RS21410;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 35182 36555 . + . ID=gene-AC57_RS21405;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AC57_RS21405;old_locus_tag=AC57_0362 NZ_JJLR01000013.1 Protein Homology CDS 35182 36555 . + 0 ID=cds-WP_032285631.1;Parent=gene-AC57_RS21405;Dbxref=GenBank:WP_032285631.1;Name=WP_032285631.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AC57_RS21405;product=proline-specific permease ProY;protein_id=WP_032285631.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 36711 38528 . + . ID=gene-AC57_RS21400;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AC57_RS21400;old_locus_tag=AC57_0363 NZ_JJLR01000013.1 Protein Homology CDS 36711 38528 . + 0 ID=cds-WP_032285632.1;Parent=gene-AC57_RS21400;Dbxref=GenBank:WP_032285632.1;Name=WP_032285632.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706291.1;locus_tag=AC57_RS21400;product=maltodextrin glucosidase;protein_id=WP_032285632.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 38533 39114 . - . ID=gene-AC57_RS21395;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AC57_RS21395;old_locus_tag=AC57_0364 NZ_JJLR01000013.1 Protein Homology CDS 38533 39114 . - 0 ID=cds-WP_001009885.1;Parent=gene-AC57_RS21395;Dbxref=GenBank:WP_001009885.1;Name=WP_001009885.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=AC57_RS21395;product=ACP phosphodiesterase;protein_id=WP_001009885.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 39207 40277 . + . ID=gene-AC57_RS21390;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AC57_RS21390;old_locus_tag=AC57_0365 NZ_JJLR01000013.1 Protein Homology CDS 39207 40277 . + 0 ID=cds-WP_001266503.1;Parent=gene-AC57_RS21390;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AC57_RS21390;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 40333 41460 . + . ID=gene-AC57_RS21385;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AC57_RS21385;old_locus_tag=AC57_0366 NZ_JJLR01000013.1 Protein Homology CDS 40333 41460 . + 0 ID=cds-WP_000667319.1;Parent=gene-AC57_RS21385;Dbxref=GenBank:WP_000667319.1;Name=WP_000667319.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AC57_RS21385;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_000667319.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 41483 41815 . + . ID=gene-AC57_RS21380;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AC57_RS21380;old_locus_tag=AC57_0367 NZ_JJLR01000013.1 Protein Homology CDS 41483 41815 . + 0 ID=cds-WP_000007629.1;Parent=gene-AC57_RS21380;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AC57_RS21380;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 41843 43690 . + . ID=gene-AC57_RS21375;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AC57_RS21375;old_locus_tag=AC57_0368 NZ_JJLR01000013.1 Protein Homology CDS 41843 43690 . + 0 ID=cds-WP_032237081.1;Parent=gene-AC57_RS21375;Dbxref=GenBank:WP_032237081.1;Name=WP_032237081.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AC57_RS21375;product=protein translocase subunit SecD;protein_id=WP_032237081.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 43701 44672 . + . ID=gene-AC57_RS21370;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AC57_RS21370;old_locus_tag=AC57_0369 NZ_JJLR01000013.1 Protein Homology CDS 43701 44672 . + 0 ID=cds-WP_000046637.1;Parent=gene-AC57_RS21370;Dbxref=GenBank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AC57_RS21370;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 44801 45148 . + . ID=gene-AC57_RS21365;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AC57_RS21365;old_locus_tag=AC57_0370 NZ_JJLR01000013.1 Protein Homology CDS 44801 45148 . + 0 ID=cds-WP_000974813.1;Parent=gene-AC57_RS21365;Dbxref=GenBank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AC57_RS21365;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 45325 46209 . - . ID=gene-AC57_RS21360;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AC57_RS21360;old_locus_tag=AC57_0371 NZ_JJLR01000013.1 Protein Homology CDS 45325 46209 . - 0 ID=cds-WP_001295328.1;Parent=gene-AC57_RS21360;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AC57_RS21360;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 46508 47047 . - . ID=gene-AC57_RS21355;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AC57_RS21355;old_locus_tag=AC57_0372 NZ_JJLR01000013.1 Protein Homology CDS 46508 47047 . - 0 ID=cds-WP_001301329.1;Parent=gene-AC57_RS21355;Dbxref=GenBank:WP_001301329.1;Name=WP_001301329.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001430049.1;locus_tag=AC57_RS21355;product=DUF3251 domain-containing protein;protein_id=WP_001301329.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 47198 47647 . + . ID=gene-AC57_RS21350;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AC57_RS21350;old_locus_tag=AC57_0373 NZ_JJLR01000013.1 Protein Homology CDS 47198 47647 . + 0 ID=cds-WP_000543535.1;Parent=gene-AC57_RS21350;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AC57_RS21350;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 47651 48754 . + . ID=gene-AC57_RS21345;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AC57_RS21345;old_locus_tag=AC57_0374 NZ_JJLR01000013.1 Protein Homology CDS 47651 48754 . + 0 ID=cds-WP_001150456.1;Parent=gene-AC57_RS21345;Dbxref=GenBank:WP_001150456.1;Name=WP_001150456.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414948.1;locus_tag=AC57_RS21345;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_001150456.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 48843 49313 . + . ID=gene-AC57_RS21340;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AC57_RS21340;old_locus_tag=AC57_0375 NZ_JJLR01000013.1 Protein Homology CDS 48843 49313 . + 0 ID=cds-WP_001021161.1;Parent=gene-AC57_RS21340;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AC57_RS21340;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 49333 49752 . + . ID=gene-AC57_RS21335;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AC57_RS21335;old_locus_tag=AC57_0376 NZ_JJLR01000013.1 Protein Homology CDS 49333 49752 . + 0 ID=cds-WP_000801125.1;Parent=gene-AC57_RS21335;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AC57_RS21335;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 49830 50807 . + . ID=gene-AC57_RS21330;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AC57_RS21330;old_locus_tag=AC57_0377 NZ_JJLR01000013.1 Protein Homology CDS 49830 50807 . + 0 ID=cds-WP_000742107.1;Parent=gene-AC57_RS21330;Dbxref=GenBank:WP_000742107.1;Name=WP_000742107.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AC57_RS21330;product=thiamine-phosphate kinase;protein_id=WP_000742107.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 50785 51303 . + . ID=gene-AC57_RS21325;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AC57_RS21325;old_locus_tag=AC57_0378 NZ_JJLR01000013.1 Protein Homology CDS 50785 51303 . + 0 ID=cds-WP_000154044.1;Parent=gene-AC57_RS21325;Dbxref=GenBank:WP_000154044.1;Name=WP_000154044.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414952.1;locus_tag=AC57_RS21325;product=phosphatidylglycerophosphatase A;protein_id=WP_000154044.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 51357 52331 . - . ID=gene-AC57_RS21320;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AC57_RS21320;old_locus_tag=AC57_0379 NZ_JJLR01000013.1 Protein Homology CDS 51357 52331 . - 0 ID=cds-WP_001199800.1;Parent=gene-AC57_RS21320;Dbxref=GenBank:WP_001199800.1;Name=WP_001199800.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414953.2;locus_tag=AC57_RS21320;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199800.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 52511 54373 . - . ID=gene-AC57_RS21315;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AC57_RS21315;old_locus_tag=AC57_0380 NZ_JJLR01000013.1 Protein Homology CDS 52511 54373 . - 0 ID=cds-WP_000006806.1;Parent=gene-AC57_RS21315;Dbxref=GenBank:WP_000006806.1;Name=WP_000006806.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=AC57_RS21315;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_000006806.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 54398 55297 . - . ID=gene-AC57_RS21310;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AC57_RS21310;old_locus_tag=AC57_0381 NZ_JJLR01000013.1 Protein Homology CDS 54398 55297 . - 0 ID=cds-WP_000347217.1;Parent=gene-AC57_RS21310;Dbxref=GenBank:WP_000347217.1;Name=WP_000347217.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AC57_RS21310;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347217.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 55297 55539 . - . ID=gene-AC57_RS21305;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AC57_RS21305;old_locus_tag=AC57_0382 NZ_JJLR01000013.1 Protein Homology CDS 55297 55539 . - 0 ID=cds-WP_001124935.1;Parent=gene-AC57_RS21305;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AC57_RS21305;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 55745 57193 . + . ID=gene-AC57_RS21300;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AC57_RS21300;old_locus_tag=AC57_0383 NZ_JJLR01000013.1 Protein Homology CDS 55745 57193 . + 0 ID=cds-WP_000668682.1;Parent=gene-AC57_RS21300;Dbxref=GenBank:WP_000668682.1;Name=WP_000668682.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AC57_RS21300;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668682.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 57247 57837 . - . ID=gene-AC57_RS21295;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AC57_RS21295;old_locus_tag=AC57_0384 NZ_JJLR01000013.1 Protein Homology CDS 57247 57837 . - 0 ID=cds-WP_001276305.1;Parent=gene-AC57_RS21295;Dbxref=GenBank:WP_001276305.1;Name=WP_001276305.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414958.4;locus_tag=AC57_RS21295;product=protein deglycase YajL;protein_id=WP_001276305.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 57800 58711 . - . ID=gene-AC57_RS21290;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AC57_RS21290;old_locus_tag=AC57_0385 NZ_JJLR01000013.1 Protein Homology CDS 57800 58711 . - 0 ID=cds-WP_000705865.1;Parent=gene-AC57_RS21290;Dbxref=GenBank:WP_000705865.1;Name=WP_000705865.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AC57_RS21290;product=2-dehydropantoate 2-reductase;protein_id=WP_000705865.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 58879 59370 . + . ID=gene-AC57_RS21285;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AC57_RS21285;old_locus_tag=AC57_0386 NZ_JJLR01000013.1 Protein Homology CDS 58879 59370 . + 0 ID=cds-WP_001138904.1;Parent=gene-AC57_RS21285;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AC57_RS21285;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 59498 60862 . - . ID=gene-AC57_RS21280;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AC57_RS21280;old_locus_tag=AC57_0387 NZ_JJLR01000013.1 Protein Homology CDS 59498 60862 . - 0 ID=cds-WP_001000956.1;Parent=gene-AC57_RS21280;Dbxref=GenBank:WP_001000956.1;Name=WP_001000956.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308508.2;locus_tag=AC57_RS21280;product=MFS transporter;protein_id=WP_001000956.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 61011 61901 . - . ID=gene-AC57_RS21275;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AC57_RS21275;old_locus_tag=AC57_0388 NZ_JJLR01000013.1 Protein Homology CDS 61011 61901 . - 0 ID=cds-WP_032279445.1;Parent=gene-AC57_RS21275;Dbxref=GenBank:WP_032279445.1;Name=WP_032279445.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AC57_RS21275;product=heme o synthase;protein_id=WP_032279445.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 61913 62242 . - . ID=gene-AC57_RS21270;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AC57_RS21270;old_locus_tag=AC57_0389 NZ_JJLR01000013.1 Protein Homology CDS 61913 62242 . - 0 ID=cds-WP_000019869.1;Parent=gene-AC57_RS21270;Dbxref=GenBank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AC57_RS21270;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 62242 62856 . - . ID=gene-AC57_RS21265;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AC57_RS21265;old_locus_tag=AC57_0390 NZ_JJLR01000013.1 Protein Homology CDS 62242 62856 . - 0 ID=cds-WP_000179819.1;Parent=gene-AC57_RS21265;Dbxref=GenBank:WP_000179819.1;Name=WP_000179819.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AC57_RS21265;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_000179819.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 62846 64837 . - . ID=gene-AC57_RS21260;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AC57_RS21260;old_locus_tag=AC57_0391 NZ_JJLR01000013.1 Protein Homology CDS 62846 64837 . - 0 ID=cds-WP_000467180.1;Parent=gene-AC57_RS21260;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AC57_RS21260;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 64859 65806 . - . ID=gene-AC57_RS21255;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AC57_RS21255;old_locus_tag=AC57_0392 NZ_JJLR01000013.1 Protein Homology CDS 64859 65806 . - 0 ID=cds-WP_001239436.1;Parent=gene-AC57_RS21255;Dbxref=GenBank:WP_001239436.1;Name=WP_001239436.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AC57_RS21255;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239436.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 66266 67741 . - . ID=gene-AC57_RS21250;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AC57_RS21250;old_locus_tag=AC57_0393 NZ_JJLR01000013.1 Protein Homology CDS 66266 67741 . - 0 ID=cds-WP_000098429.1;Parent=gene-AC57_RS21250;Dbxref=GenBank:WP_000098429.1;Name=WP_000098429.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308514.1;locus_tag=AC57_RS21250;product=muropeptide MFS transporter AmpG;protein_id=WP_000098429.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 67785 68363 . - . ID=gene-AC57_RS21245;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AC57_RS21245;old_locus_tag=AC57_0394 NZ_JJLR01000013.1 Protein Homology CDS 67785 68363 . - 0 ID=cds-WP_001295326.1;Parent=gene-AC57_RS21245;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AC57_RS21245;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 68668 68985 . + . ID=gene-AC57_RS21240;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AC57_RS21240;old_locus_tag=AC57_0395 NZ_JJLR01000013.1 Protein Homology CDS 68668 68985 . + 0 ID=cds-WP_000973448.1;Parent=gene-AC57_RS21240;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AC57_RS21240;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 69329 70627 . + . ID=gene-AC57_RS21230;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AC57_RS21230;old_locus_tag=AC57_0397 NZ_JJLR01000013.1 Protein Homology CDS 69329 70627 . + 0 ID=cds-WP_001198386.1;Parent=gene-AC57_RS21230;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AC57_RS21230;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 70873 71496 . + . ID=gene-AC57_RS21225;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AC57_RS21225;old_locus_tag=AC57_0398 NZ_JJLR01000013.1 Protein Homology CDS 70873 71496 . + 0 ID=cds-WP_000122253.1;Parent=gene-AC57_RS21225;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AC57_RS21225;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 71622 72896 . + . ID=gene-AC57_RS21220;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AC57_RS21220;old_locus_tag=AC57_0399 NZ_JJLR01000013.1 Protein Homology CDS 71622 72896 . + 0 ID=cds-WP_000130305.1;Parent=gene-AC57_RS21220;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AC57_RS21220;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 73084 75438 . + . ID=gene-AC57_RS21215;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AC57_RS21215;old_locus_tag=AC57_0400 NZ_JJLR01000013.1 Protein Homology CDS 73084 75438 . + 0 ID=cds-WP_001295325.1;Parent=gene-AC57_RS21215;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AC57_RS21215;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 75629 75919 . + . ID=gene-AC57_RS21210;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AC57_RS21210;old_locus_tag=AC57_0401 NZ_JJLR01000013.1 Protein Homology CDS 75629 75919 . + 0 ID=cds-WP_254892905.1;Parent=gene-AC57_RS21210;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=AC57_RS21210;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 76111 77982 . + . ID=gene-AC57_RS21205;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AC57_RS21205;old_locus_tag=AC57_0402 NZ_JJLR01000013.1 Protein Homology CDS 76111 77982 . + 0 ID=cds-WP_000969414.1;Parent=gene-AC57_RS21205;Dbxref=GenBank:WP_000969414.1;Name=WP_000969414.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AC57_RS21205;product=peptidylprolyl isomerase;protein_id=WP_000969414.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 78133 78504 . + . ID=gene-AC57_RS21200;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AC57_RS21200;old_locus_tag=AC57_0403 NZ_JJLR01000013.1 Protein Homology CDS 78133 78504 . + 0 ID=cds-WP_000680312.1;Parent=gene-AC57_RS21200;Dbxref=GenBank:WP_000680312.1;Name=WP_000680312.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AC57_RS21200;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680312.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 78598 78996 . + . ID=gene-AC57_RS21195;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AC57_RS21195;old_locus_tag=AC57_0404 NZ_JJLR01000013.1 Protein Homology CDS 78598 78996 . + 0 ID=cds-WP_001194534.1;Parent=gene-AC57_RS21195;Dbxref=GenBank:WP_001194534.1;Name=WP_001194534.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414977.1;locus_tag=AC57_RS21195;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194534.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 79048 79743 . - . ID=gene-AC57_RS21190;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AC57_RS21190;old_locus_tag=AC57_0405 NZ_JJLR01000013.1 Protein Homology CDS 79048 79743 . - 0 ID=cds-WP_000817229.1;Parent=gene-AC57_RS21190;Dbxref=GenBank:WP_000817229.1;Name=WP_000817229.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706338.1;locus_tag=AC57_RS21190;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817229.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 79808 81508 . - . ID=gene-AC57_RS21185;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AC57_RS21185;old_locus_tag=AC57_0406 NZ_JJLR01000013.1 Protein Homology CDS 79808 81508 . - 0 ID=cds-WP_032279444.1;Parent=gene-AC57_RS21185;Dbxref=GenBank:WP_032279444.1;Name=WP_032279444.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308526.1;locus_tag=AC57_RS21185;product=SgrR family transcriptional regulator;protein_id=WP_032279444.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 81608 82426 . + . ID=gene-AC57_RS21180;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AC57_RS21180;old_locus_tag=AC57_0407 NZ_JJLR01000013.1 Protein Homology CDS 81608 82426 . + 0 ID=cds-WP_000113027.1;Parent=gene-AC57_RS21180;Dbxref=GenBank:WP_000113027.1;Name=WP_000113027.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414980.2;locus_tag=AC57_RS21180;product=HMP-PP phosphatase;protein_id=WP_000113027.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 82579 83037 . + . ID=gene-AC57_RS21175;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AC57_RS21175;old_locus_tag=AC57_0408 NZ_JJLR01000013.1 Protein Homology CDS 82579 83037 . + 0 ID=cds-WP_000884589.1;Parent=gene-AC57_RS21175;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AC57_RS21175;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 83067 84839 . + . ID=gene-AC57_RS21170;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AC57_RS21170;old_locus_tag=AC57_0409 NZ_JJLR01000013.1 Protein Homology CDS 83067 84839 . + 0 ID=cds-WP_001235622.1;Parent=gene-AC57_RS21170;Dbxref=GenBank:WP_001235622.1;Name=WP_001235622.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308529.1;locus_tag=AC57_RS21170;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_001235622.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 84832 86613 . + . ID=gene-AC57_RS21165;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AC57_RS21165;old_locus_tag=AC57_0410 NZ_JJLR01000013.1 Protein Homology CDS 84832 86613 . + 0 ID=cds-WP_032237086.1;Parent=gene-AC57_RS21165;Dbxref=GenBank:WP_032237086.1;Name=WP_032237086.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AC57_RS21165;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_032237086.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 86794 87132 . + . ID=gene-AC57_RS21160;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AC57_RS21160;old_locus_tag=AC57_0412 NZ_JJLR01000013.1 Protein Homology CDS 86794 87132 . + 0 ID=cds-WP_000780338.1;Parent=gene-AC57_RS21160;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AC57_RS21160;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 87162 88448 . + . ID=gene-AC57_RS21155;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AC57_RS21155;old_locus_tag=AC57_0413 NZ_JJLR01000013.1 Protein Homology CDS 87162 88448 . + 0 ID=cds-WP_000685029.1;Parent=gene-AC57_RS21155;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AC57_RS21155;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 88497 89357 . - . ID=gene-AC57_RS21150;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AC57_RS21150;old_locus_tag=AC57_0414 NZ_JJLR01000013.1 Protein Homology CDS 88497 89357 . - 0 ID=cds-WP_032237087.1;Parent=gene-AC57_RS21150;Dbxref=GenBank:WP_032237087.1;Name=WP_032237087.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AC57_RS21150;product=acyl-CoA thioesterase II;protein_id=WP_032237087.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 89575 90147 . + . ID=gene-AC57_RS21145;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AC57_RS21145;old_locus_tag=AC57_0415 NZ_JJLR01000013.1 Protein Homology CDS 89575 90147 . + 0 ID=cds-WP_032237088.1;Parent=gene-AC57_RS21145;Dbxref=GenBank:WP_032237088.1;Name=WP_032237088.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AC57_RS21145;product=YbaY family lipoprotein;protein_id=WP_032237088.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 90178 90489 . - . ID=gene-AC57_RS21140;Name=AC57_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS21140;old_locus_tag=AC57_0416 NZ_JJLR01000013.1 Protein Homology CDS 90178 90489 . - 0 ID=cds-WP_000409911.1;Parent=gene-AC57_RS21140;Dbxref=GenBank:WP_000409911.1;Name=WP_000409911.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AC57_RS21140;product=MGMT family protein;protein_id=WP_000409911.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 90652 90748 . + . ID=gene-AC57_RS26145;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AC57_RS26145 NZ_JJLR01000013.1 cmsearch SRP_RNA 90652 90748 . + . ID=rna-AC57_RS26145;Parent=gene-AC57_RS26145;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26145;product=signal recognition particle sRNA small type NZ_JJLR01000013.1 cmsearch exon 90652 90748 . + . ID=exon-AC57_RS26145-1;Parent=rna-AC57_RS26145;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26145;product=signal recognition particle sRNA small type NZ_JJLR01000013.1 RefSeq gene 90868 91221 . + . ID=gene-AC57_RS21135;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AC57_RS21135;old_locus_tag=AC57_0417 NZ_JJLR01000013.1 Protein Homology CDS 90868 91221 . + 0 ID=cds-WP_000878140.1;Parent=gene-AC57_RS21135;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AC57_RS21135;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 91263 92813 . - . ID=gene-AC57_RS21130;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AC57_RS21130;old_locus_tag=AC57_0418 NZ_JJLR01000013.1 Protein Homology CDS 91263 92813 . - 0 ID=cds-WP_032279449.1;Parent=gene-AC57_RS21130;Dbxref=GenBank:WP_032279449.1;Name=WP_032279449.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414990.2;locus_tag=AC57_RS21130;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_032279449.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 92977 93447 . - . ID=gene-AC57_RS21125;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AC57_RS21125;old_locus_tag=AC57_0419 NZ_JJLR01000013.1 Protein Homology CDS 92977 93447 . - 0 ID=cds-WP_000136192.1;Parent=gene-AC57_RS21125;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AC57_RS21125;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 93563 94114 . - . ID=gene-AC57_RS21120;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AC57_RS21120;old_locus_tag=AC57_0420 NZ_JJLR01000013.1 Protein Homology CDS 93563 94114 . - 0 ID=cds-WP_000102564.1;Parent=gene-AC57_RS21120;Dbxref=GenBank:WP_000102564.1;Name=WP_000102564.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AC57_RS21120;product=maltose O-acetyltransferase;protein_id=WP_000102564.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 94286 94504 . - . ID=gene-AC57_RS21115;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AC57_RS21115;old_locus_tag=AC57_0421 NZ_JJLR01000013.1 Protein Homology CDS 94286 94504 . - 0 ID=cds-WP_001291435.1;Parent=gene-AC57_RS21115;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AC57_RS21115;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 94530 94904 . - . ID=gene-AC57_RS21110;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AC57_RS21110;old_locus_tag=AC57_0422 NZ_JJLR01000013.1 Protein Homology CDS 94530 94904 . - 0 ID=cds-WP_000344800.1;Parent=gene-AC57_RS21110;Dbxref=GenBank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AC57_RS21110;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 95450 98599 . - . ID=gene-AC57_RS21105;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AC57_RS21105;old_locus_tag=AC57_0423 NZ_JJLR01000013.1 Protein Homology CDS 95450 98599 . - 0 ID=cds-WP_032237090.1;Parent=gene-AC57_RS21105;Dbxref=GenBank:WP_032237090.1;Name=WP_032237090.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AC57_RS21105;product=efflux RND transporter permease AcrB;protein_id=WP_032237090.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 98622 99815 . - . ID=gene-AC57_RS21100;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AC57_RS21100;old_locus_tag=AC57_0424 NZ_JJLR01000013.1 Protein Homology CDS 98622 99815 . - 0 ID=cds-WP_001295324.1;Parent=gene-AC57_RS21100;Dbxref=GenBank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AC57_RS21100;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 99957 100604 . + . ID=gene-AC57_RS21095;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AC57_RS21095;old_locus_tag=AC57_0425 NZ_JJLR01000013.1 Protein Homology CDS 99957 100604 . + 0 ID=cds-WP_000101737.1;Parent=gene-AC57_RS21095;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AC57_RS21095;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 100732 104094 . + . ID=gene-AC57_RS21090;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AC57_RS21090;old_locus_tag=AC57_0426 NZ_JJLR01000013.1 Protein Homology CDS 100732 104094 . + 0 ID=cds-WP_000177726.1;Parent=gene-AC57_RS21090;Dbxref=GenBank:WP_000177726.1;Name=WP_000177726.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706358.1;locus_tag=AC57_RS21090;product=mechanosensitive channel MscK;protein_id=WP_000177726.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 104306 104467 . - . ID=gene-AC57_RS21085;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AC57_RS21085;old_locus_tag=AC57_0427 NZ_JJLR01000013.1 Protein Homology CDS 104306 104467 . - 0 ID=cds-WP_000051153.1;Parent=gene-AC57_RS21085;Dbxref=GenBank:WP_000051153.1;Name=WP_000051153.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414999.1;locus_tag=AC57_RS21085;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051153.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 104481 105008 . - . ID=gene-AC57_RS21080;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AC57_RS21080;old_locus_tag=AC57_0428 NZ_JJLR01000013.1 Protein Homology CDS 104481 105008 . - 0 ID=cds-WP_000844874.1;Parent=gene-AC57_RS21080;Dbxref=GenBank:WP_000844874.1;Name=WP_000844874.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AC57_RS21080;product=primosomal replication protein N'';protein_id=WP_000844874.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 105078 105455 . + . ID=gene-AC57_RS21075;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AC57_RS21075;old_locus_tag=AC57_0429 NZ_JJLR01000013.1 Protein Homology CDS 105078 105455 . + 0 ID=cds-WP_001188905.1;Parent=gene-AC57_RS21075;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AC57_RS21075;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 105608 106159 . + . ID=gene-AC57_RS21070;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AC57_RS21070;old_locus_tag=AC57_0430 NZ_JJLR01000013.1 Protein Homology CDS 105608 106159 . + 0 ID=cds-WP_000127356.1;Parent=gene-AC57_RS21070;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AC57_RS21070;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 106288 108219 . + . ID=gene-AC57_RS21065;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AC57_RS21065;old_locus_tag=AC57_0431 NZ_JJLR01000013.1 Protein Homology CDS 106288 108219 . + 0 ID=cds-WP_000122020.1;Parent=gene-AC57_RS21065;Dbxref=GenBank:WP_000122020.1;Name=WP_000122020.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308550.1;locus_tag=AC57_RS21065;product=DNA polymerase III subunit gamma/tau;protein_id=WP_000122020.1;transl_table=11 NZ_JJLR01000013.1 cmsearch sequence_feature 107552 107616 . + . ID=id-AC57_RS21065;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS21065 NZ_JJLR01000013.1 RefSeq gene 108272 108601 . + . ID=gene-AC57_RS21060;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AC57_RS21060;old_locus_tag=AC57_0432 NZ_JJLR01000013.1 Protein Homology CDS 108272 108601 . + 0 ID=cds-WP_000467098.1;Parent=gene-AC57_RS21060;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AC57_RS21060;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 108601 109206 . + . ID=gene-AC57_RS21055;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AC57_RS21055;old_locus_tag=AC57_0433 NZ_JJLR01000013.1 Protein Homology CDS 108601 109206 . + 0 ID=cds-WP_001195025.1;Parent=gene-AC57_RS21055;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AC57_RS21055;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 109316 111190 . + . ID=gene-AC57_RS21050;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AC57_RS21050;old_locus_tag=AC57_0434 NZ_JJLR01000013.1 Protein Homology CDS 109316 111190 . + 0 ID=cds-WP_000678201.1;Parent=gene-AC57_RS21050;Dbxref=GenBank:WP_000678201.1;Name=WP_000678201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AC57_RS21050;product=molecular chaperone HtpG;protein_id=WP_000678201.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 111371 112015 . + . ID=gene-AC57_RS21045;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AC57_RS21045;old_locus_tag=AC57_0435 NZ_JJLR01000013.1 Protein Homology CDS 111371 112015 . + 0 ID=cds-WP_001220233.1;Parent=gene-AC57_RS21045;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AC57_RS21045;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 112147 113109 . + . ID=gene-AC57_RS21040;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AC57_RS21040;old_locus_tag=AC57_0436 NZ_JJLR01000013.1 Protein Homology CDS 112147 113109 . + 0 ID=cds-WP_001250103.1;Parent=gene-AC57_RS21040;Dbxref=GenBank:WP_001250103.1;Name=WP_001250103.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415008.1;locus_tag=AC57_RS21040;product=ferrochelatase;protein_id=WP_001250103.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 113106 114065 . - . ID=gene-AC57_RS21035;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AC57_RS21035;old_locus_tag=AC57_0437 NZ_JJLR01000013.1 Protein Homology CDS 113106 114065 . - 0 ID=cds-WP_032237092.1;Parent=gene-AC57_RS21035;Dbxref=GenBank:WP_032237092.1;Name=WP_032237092.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AC57_RS21035;product=acetyl esterase;protein_id=WP_032237092.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 114217 115521 . + . ID=gene-AC57_RS21030;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AC57_RS21030;old_locus_tag=AC57_0438 NZ_JJLR01000013.1 Protein Homology CDS 114217 115521 . + 0 ID=cds-WP_000671574.1;Parent=gene-AC57_RS21030;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AC57_RS21030;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 115654 117330 . - . ID=gene-AC57_RS21025;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AC57_RS21025;old_locus_tag=AC57_0439 NZ_JJLR01000013.1 Protein Homology CDS 115654 117330 . - 0 ID=cds-WP_000546253.1;Parent=gene-AC57_RS21025;Dbxref=GenBank:WP_000546253.1;Name=WP_000546253.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706371.1;locus_tag=AC57_RS21025;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546253.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 117568 118788 . - . ID=gene-AC57_RS21020;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AC57_RS21020;old_locus_tag=AC57_0440 NZ_JJLR01000013.1 Protein Homology CDS 117568 118788 . - 0 ID=cds-WP_001251634.1;Parent=gene-AC57_RS21020;Dbxref=GenBank:WP_001251634.1;Name=WP_001251634.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308559.1;locus_tag=AC57_RS21020;product=fosmidomycin MFS transporter;protein_id=WP_001251634.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 119006 120658 . + . ID=gene-AC57_RS21015;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AC57_RS21015;old_locus_tag=AC57_0441 NZ_JJLR01000013.1 Protein Homology CDS 119006 120658 . + 0 ID=cds-WP_023281029.1;Parent=gene-AC57_RS21015;Dbxref=GenBank:WP_023281029.1;Name=WP_023281029.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308560.1;locus_tag=AC57_RS21015;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_023281029.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 120695 121174 . - . ID=gene-AC57_RS21010;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AC57_RS21010;old_locus_tag=AC57_0442 NZ_JJLR01000013.1 Protein Homology CDS 120695 121174 . - 0 ID=cds-WP_000186631.1;Parent=gene-AC57_RS21010;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AC57_RS21010;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 121378 122172 . - . ID=gene-AC57_RS21005;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AC57_RS21005;old_locus_tag=AC57_0443 NZ_JJLR01000013.1 Protein Homology CDS 121378 122172 . - 0 ID=cds-WP_000365135.1;Parent=gene-AC57_RS21005;Dbxref=GenBank:WP_000365135.1;Name=WP_000365135.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AC57_RS21005;product=TraB/GumN family protein;protein_id=WP_000365135.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 122310 122651 . + . ID=gene-AC57_RS21000;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AC57_RS21000;old_locus_tag=AC57_0444 NZ_JJLR01000013.1 Protein Homology CDS 122310 122651 . + 0 ID=cds-WP_001338329.1;Parent=gene-AC57_RS21000;Dbxref=GenBank:WP_001338329.1;Name=WP_001338329.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AC57_RS21000;product=HigA family addiction module antitoxin;protein_id=WP_001338329.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 122866 125370 . - . ID=gene-AC57_RS20995;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AC57_RS20995;old_locus_tag=AC57_0445 NZ_JJLR01000013.1 Protein Homology CDS 122866 125370 . - 0 ID=cds-WP_032237094.1;Parent=gene-AC57_RS20995;Dbxref=GenBank:WP_032237094.1;Name=WP_032237094.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308564.1;locus_tag=AC57_RS20995;product=copper-exporting P-type ATPase CopA;protein_id=WP_032237094.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 125632 126564 . + . ID=gene-AC57_RS20990;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AC57_RS20990;old_locus_tag=AC57_0446 NZ_JJLR01000013.1 Protein Homology CDS 125632 126564 . + 0 ID=cds-WP_032237095.1;Parent=gene-AC57_RS20990;Dbxref=GenBank:WP_032237095.1;Name=WP_032237095.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706378.1;locus_tag=AC57_RS20990;product=glutaminase A;protein_id=WP_032237095.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 126567 127859 . + . ID=gene-AC57_RS20985;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AC57_RS20985;old_locus_tag=AC57_0447 NZ_JJLR01000013.1 Protein Homology CDS 126567 127859 . + 0 ID=cds-WP_000982170.1;Parent=gene-AC57_RS20985;Dbxref=GenBank:WP_000982170.1;Name=WP_000982170.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308566.1;locus_tag=AC57_RS20985;product=APC family permease;protein_id=WP_000982170.1;transl_table=11 NZ_JJLR01000013.1 RefSeq pseudogene 127890 127987 . + . ID=gene-AC57_RS30610;Name=AC57_RS30610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30610;partial=true;pseudo=true;start_range=.,127890 NZ_JJLR01000013.1 Protein Homology CDS 127890 127987 . + 0 ID=cds-AC57_RS30610;Parent=gene-AC57_RS30610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AC57_RS30610;partial=true;product=hypothetical protein;pseudo=true;start_range=.,127890;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 127984 128391 . + . ID=gene-AC57_RS20980;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AC57_RS20980;old_locus_tag=AC57_0448 NZ_JJLR01000013.1 Protein Homology CDS 127984 128391 . + 0 ID=cds-WP_001026747.1;Parent=gene-AC57_RS20980;Dbxref=GenBank:WP_001026747.1;Name=WP_001026747.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415020.1;locus_tag=AC57_RS20980;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026747.1;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 128392 128850 . - . ID=gene-AC57_RS20975;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AC57_RS20975;old_locus_tag=AC57_0449 NZ_JJLR01000013.1 Protein Homology CDS 128392 128850 . - 0 ID=cds-WP_000970321.1;Parent=gene-AC57_RS20975;Dbxref=GenBank:WP_000970321.1;Name=WP_000970321.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415021.2;locus_tag=AC57_RS20975;product=NfeD family protein;protein_id=WP_000970321.1;transl_table=11 NZ_JJLR01000013.1 RefSeq pseudogene 128847 129572 . - . ID=gene-AC57_RS20970;Name=AC57_RS20970;end_range=129572,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20970;old_locus_tag=AC57_0450;partial=true;pseudo=true NZ_JJLR01000013.1 Protein Homology CDS 128847 129572 . - 0 ID=cds-AC57_RS20970;Parent=gene-AC57_RS20970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;end_range=129572,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AC57_RS20970;partial=true;product=SPFH domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000013.1 RefSeq gene 129583 129829 . - . ID=gene-AC57_RS29600;Name=AC57_RS29600;end_range=129829,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29600;old_locus_tag=AC57_0451;partial=true NZ_JJLR01000013.1 Protein Homology CDS 129583 129829 . - 1 ID=cds-WP_000696888.1;Parent=gene-AC57_RS29600;Dbxref=GenBank:WP_000696888.1;Name=WP_000696888.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=129829,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS29600;partial=true;product=IS1 family transposase;protein_id=WP_000696888.1;transl_table=11 ##sequence-region NZ_JJLR01000014.1 1 12104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000014.1 RefSeq region 1 12104 . + . ID=NZ_JJLR01000014.1:1..12104;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000014.1 RefSeq pseudogene 1 287 . - . ID=gene-AC57_RS0123170;Name=AC57_RS0123170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123170;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000014.1 Protein Homology CDS 1 287 . - 0 ID=cds-AC57_RS0123170;Parent=gene-AC57_RS0123170;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0123170;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000014.1 RefSeq pseudogene 342 548 . - . ID=gene-AC57_RS20960;Name=AC57_RS20960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20960;old_locus_tag=AC57_0453;partial=true;pseudo=true;start_range=.,342 NZ_JJLR01000014.1 Protein Homology CDS 342 548 . - 0 ID=cds-AC57_RS20960;Parent=gene-AC57_RS20960;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AC57_RS20960;partial=true;product=SPFH domain-containing protein;pseudo=true;start_range=.,342;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 694 1371 . + . ID=gene-AC57_RS20955;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AC57_RS20955;old_locus_tag=AC57_0454 NZ_JJLR01000014.1 Protein Homology CDS 694 1371 . + 0 ID=cds-WP_001157540.1;Parent=gene-AC57_RS20955;Dbxref=GenBank:WP_001157540.1;Name=WP_001157540.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415023.1;locus_tag=AC57_RS20955;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_001157540.1;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 1358 2137 . + . ID=gene-AC57_RS20950;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AC57_RS20950;old_locus_tag=AC57_0455 NZ_JJLR01000014.1 Protein Homology CDS 1358 2137 . + 0 ID=cds-WP_032280080.1;Parent=gene-AC57_RS20950;Dbxref=GenBank:WP_032280080.1;Name=WP_032280080.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AC57_RS20950;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_032280080.1;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 2200 3054 . - . ID=gene-AC57_RS20945;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AC57_RS20945;old_locus_tag=AC57_0456 NZ_JJLR01000014.1 Protein Homology CDS 2200 3054 . - 0 ID=cds-WP_001300573.1;Parent=gene-AC57_RS20945;Dbxref=GenBank:WP_001300573.1;Name=WP_001300573.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415025.4;locus_tag=AC57_RS20945;product=chaperedoxin;protein_id=WP_001300573.1;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 3115 3924 . - . ID=gene-AC57_RS20940;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AC57_RS20940;old_locus_tag=AC57_0457 NZ_JJLR01000014.1 Protein Homology CDS 3115 3924 . - 0 ID=cds-WP_000148959.1;Parent=gene-AC57_RS20940;Dbxref=GenBank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AC57_RS20940;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 3914 4537 . - . ID=gene-AC57_RS20935;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AC57_RS20935;old_locus_tag=AC57_0458 NZ_JJLR01000014.1 Protein Homology CDS 3914 4537 . - 0 ID=cds-WP_001295836.1;Parent=gene-AC57_RS20935;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AC57_RS20935;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 4508 5194 . + . ID=gene-AC57_RS20930;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AC57_RS20930;old_locus_tag=AC57_0459 NZ_JJLR01000014.1 Protein Homology CDS 4508 5194 . + 0 ID=cds-WP_032237096.1;Parent=gene-AC57_RS20930;Dbxref=GenBank:WP_032237096.1;Name=WP_032237096.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AC57_RS20930;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_032237096.1;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 5191 7605 . + . ID=gene-AC57_RS20925;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AC57_RS20925;old_locus_tag=AC57_0460 NZ_JJLR01000014.1 Protein Homology CDS 5191 7605 . + 0 ID=cds-WP_000561872.1;Parent=gene-AC57_RS20925;Dbxref=GenBank:WP_000561872.1;Name=WP_000561872.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AC57_RS20925;product=putative ABC transporter permease subunit YbbP;protein_id=WP_000561872.1;transl_table=11 NZ_JJLR01000014.1 RefSeq pseudogene 8036 11815 . + . ID=gene-AC57_RS20920;Name=rhsD;end_range=11815,.;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AC57_RS20920;old_locus_tag=AC57_0461;partial=true;pseudo=true NZ_JJLR01000014.1 Protein Homology CDS 8036 11815 . + 0 ID=cds-AC57_RS20920;Parent=gene-AC57_RS20920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11815,.;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312891.1;locus_tag=AC57_RS20920;partial=true;product=rhs element protein RhsD;pseudo=true;transl_table=11 NZ_JJLR01000014.1 RefSeq gene 11893 12104 . - . ID=gene-AC57_RS20915;Name=AC57_RS20915;end_range=12104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20915;old_locus_tag=AC57_0462;partial=true NZ_JJLR01000014.1 Protein Homology CDS 11893 12104 . - 2 ID=cds-WP_000320526.1;Parent=gene-AC57_RS20915;Dbxref=GenBank:WP_000320526.1;Name=WP_000320526.1;end_range=12104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC57_RS20915;partial=true;product=transposase domain-containing protein;protein_id=WP_000320526.1;transl_table=11 ##sequence-region NZ_JJLR01000015.1 1 8408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000015.1 RefSeq region 1 8408 . + . ID=NZ_JJLR01000015.1:1..8408;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000015.1 RefSeq gene 1 181 . - . ID=gene-AC57_RS20910;Name=AC57_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20910;old_locus_tag=AC57_0463;partial=true;start_range=.,1 NZ_JJLR01000015.1 Protein Homology CDS 1 181 . - 0 ID=cds-WP_000179194.1;Parent=gene-AC57_RS20910;Dbxref=GenBank:WP_000179194.1;Name=WP_000179194.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20910;partial=true;product=IS1 family transposase;protein_id=WP_000179194.1;start_range=.,1;transl_table=11 NZ_JJLR01000015.1 RefSeq pseudogene 238 429 . + . ID=gene-AC57_RS26515;Name=AC57_RS26515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26515;partial=true;pseudo=true;start_range=.,238 NZ_JJLR01000015.1 Protein Homology CDS 238 429 . + 0 ID=cds-AC57_RS26515;Parent=gene-AC57_RS26515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AC57_RS26515;partial=true;product=hypothetical protein;pseudo=true;start_range=.,238;transl_table=11 NZ_JJLR01000015.1 RefSeq gene 410 670 . + . ID=gene-AC57_RS28650;Name=AC57_RS28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28650 NZ_JJLR01000015.1 Protein Homology CDS 410 670 . + 0 ID=cds-WP_001320180.1;Parent=gene-AC57_RS28650;Dbxref=GenBank:WP_001320180.1;Name=WP_001320180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308588.1;locus_tag=AC57_RS28650;product=hypothetical protein;protein_id=WP_001320180.1;transl_table=11 NZ_JJLR01000015.1 RefSeq gene 727 900 . + . ID=gene-AC57_RS30170;Name=AC57_RS30170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30170 NZ_JJLR01000015.1 Protein Homology CDS 727 900 . + 0 ID=cds-WP_001297301.1;Parent=gene-AC57_RS30170;Dbxref=GenBank:WP_001297301.1;Name=WP_001297301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297301.1;locus_tag=AC57_RS30170;product=hypothetical protein;protein_id=WP_001297301.1;transl_table=11 NZ_JJLR01000015.1 RefSeq pseudogene 1267 1362 . + . ID=gene-AC57_RS31165;Name=AC57_RS31165;end_range=1362,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31165;partial=true;pseudo=true NZ_JJLR01000015.1 Protein Homology CDS 1267 1362 . + 0 ID=cds-AC57_RS31165;Parent=gene-AC57_RS31165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AC57_RS31165;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000015.1 RefSeq pseudogene 1421 1786 . - . ID=gene-AC57_RS20905;Name=ylbG;gbkey=Gene;gene=ylbG;gene_biotype=pseudogene;locus_tag=AC57_RS20905;old_locus_tag=AC57_0464;partial=true;pseudo=true;start_range=.,1421 NZ_JJLR01000015.1 Protein Homology CDS 1421 1786 . - 0 ID=cds-AC57_RS20905;Parent=gene-AC57_RS20905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=ylbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AC57_RS20905;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1421;transl_table=11 NZ_JJLR01000015.1 RefSeq gene 1902 2996 . - . ID=gene-AC57_RS20900;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AC57_RS20900;old_locus_tag=AC57_0465 NZ_JJLR01000015.1 Protein Homology CDS 1902 2996 . - 0 ID=cds-WP_001157938.1;Parent=gene-AC57_RS20900;Dbxref=GenBank:WP_001157938.1;Name=WP_001157938.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415036.1;locus_tag=AC57_RS20900;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_001157938.1;transl_table=11 NZ_JJLR01000015.1 RefSeq gene 3065 3991 . - . ID=gene-AC57_RS20895;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AC57_RS20895;old_locus_tag=AC57_0466 NZ_JJLR01000015.1 Protein Homology CDS 3065 3991 . - 0 ID=cds-WP_000460145.1;Parent=gene-AC57_RS20895;Dbxref=GenBank:WP_000460145.1;Name=WP_000460145.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AC57_RS20895;product=HTH-type transcriptional activator AllS;protein_id=WP_000460145.1;transl_table=11 NZ_JJLR01000015.1 RefSeq gene 4221 4703 . + . ID=gene-AC57_RS20890;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AC57_RS20890;old_locus_tag=AC57_0467 NZ_JJLR01000015.1 Protein Homology CDS 4221 4703 . + 0 ID=cds-WP_000776388.1;Parent=gene-AC57_RS20890;Dbxref=GenBank:WP_000776388.1;Name=WP_000776388.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AC57_RS20890;product=ureidoglycolate lyase;protein_id=WP_000776388.1;transl_table=11 NZ_JJLR01000015.1 RefSeq gene 4781 5596 . + . ID=gene-AC57_RS20885;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AC57_RS20885;old_locus_tag=AC57_0468 NZ_JJLR01000015.1 Protein Homology CDS 4781 5596 . + 0 ID=cds-WP_000141275.1;Parent=gene-AC57_RS20885;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AC57_RS20885;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11 NZ_JJLR01000015.1 RefSeq gene 5686 7467 . + . ID=gene-AC57_RS20880;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AC57_RS20880;old_locus_tag=AC57_0469 NZ_JJLR01000015.1 Protein Homology CDS 5686 7467 . + 0 ID=cds-WP_001096881.1;Parent=gene-AC57_RS20880;Dbxref=GenBank:WP_001096881.1;Name=WP_001096881.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AC57_RS20880;product=glyoxylate carboligase;protein_id=WP_001096881.1;transl_table=11 NZ_JJLR01000015.1 RefSeq pseudogene 7480 8037 . + . ID=gene-AC57_RS20875;Name=AC57_RS20875;end_range=8037,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20875;old_locus_tag=AC57_0470;partial=true;pseudo=true NZ_JJLR01000015.1 Protein Homology CDS 7480 8037 . + 0 ID=cds-AC57_RS20875;Parent=gene-AC57_RS20875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8037,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415041.1;locus_tag=AC57_RS20875;partial=true;product=TIM barrel protein;pseudo=true;transl_table=11 NZ_JJLR01000015.1 RefSeq pseudogene 8052 8408 . - . ID=gene-AC57_RS20870;Name=AC57_RS20870;end_range=8408,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20870;old_locus_tag=AC57_0471;partial=true;pseudo=true NZ_JJLR01000015.1 Protein Homology CDS 8052 8408 . - 0 ID=cds-AC57_RS20870;Parent=gene-AC57_RS20870;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=8408,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20870;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000016.1 1 7590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000016.1 RefSeq region 1 7590 . + . ID=NZ_JJLR01000016.1:1..7590;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000016.1 RefSeq gene 1 236 . - . ID=gene-AC57_RS0123180;Name=AC57_RS0123180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123180;old_locus_tag=AC57_0472;partial=true;start_range=.,1 NZ_JJLR01000016.1 Protein Homology CDS 1 236 . - 0 ID=cds-WP_000179207.1-2;Parent=gene-AC57_RS0123180;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123180;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;start_range=.,1;transl_table=11 NZ_JJLR01000016.1 RefSeq pseudogene 293 520 . + . ID=gene-AC57_RS20865;Name=AC57_RS20865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20865;old_locus_tag=AC57_0473;partial=true;pseudo=true;start_range=.,293 NZ_JJLR01000016.1 Protein Homology CDS 293 520 . + 0 ID=cds-AC57_RS20865;Parent=gene-AC57_RS20865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308596.1;locus_tag=AC57_RS20865;partial=true;product=TIM barrel protein;pseudo=true;start_range=.,293;transl_table=11 NZ_JJLR01000016.1 RefSeq gene 620 1498 . + . ID=gene-AC57_RS20860;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AC57_RS20860;old_locus_tag=AC57_0474 NZ_JJLR01000016.1 Protein Homology CDS 620 1498 . + 0 ID=cds-WP_000765839.1;Parent=gene-AC57_RS20860;Dbxref=GenBank:WP_000765839.1;Name=WP_000765839.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AC57_RS20860;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_000765839.1;transl_table=11 NZ_JJLR01000016.1 RefSeq gene 1667 3121 . + . ID=gene-AC57_RS20855;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AC57_RS20855;old_locus_tag=AC57_0475 NZ_JJLR01000016.1 Protein Homology CDS 1667 3121 . + 0 ID=cds-WP_032237603.1;Parent=gene-AC57_RS20855;Dbxref=GenBank:WP_032237603.1;Name=WP_032237603.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AC57_RS20855;product=allantoin transporter;protein_id=WP_032237603.1;transl_table=11 NZ_JJLR01000016.1 RefSeq gene 3181 4542 . + . ID=gene-AC57_RS20850;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AC57_RS20850;old_locus_tag=AC57_0476 NZ_JJLR01000016.1 Protein Homology CDS 3181 4542 . + 0 ID=cds-WP_000006900.1;Parent=gene-AC57_RS20850;Dbxref=GenBank:WP_000006900.1;Name=WP_000006900.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AC57_RS20850;product=allantoinase AllB;protein_id=WP_000006900.1;transl_table=11 NZ_JJLR01000016.1 RefSeq gene 4599 5900 . + . ID=gene-AC57_RS20845;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=AC57_RS20845;old_locus_tag=AC57_0477 NZ_JJLR01000016.1 Protein Homology CDS 4599 5900 . + 0 ID=cds-WP_032280092.1;Parent=gene-AC57_RS20845;Dbxref=GenBank:WP_032280092.1;Name=WP_032280092.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AC57_RS20845;product=uracil/xanthine transporter;protein_id=WP_032280092.1;transl_table=11 NZ_JJLR01000016.1 RefSeq gene 5922 7067 . + . ID=gene-AC57_RS20840;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AC57_RS20840;old_locus_tag=AC57_0478 NZ_JJLR01000016.1 Protein Homology CDS 5922 7067 . + 0 ID=cds-WP_000706344.1;Parent=gene-AC57_RS20840;Dbxref=GenBank:WP_000706344.1;Name=WP_000706344.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415047.1;locus_tag=AC57_RS20840;product=glycerate 3-kinase;protein_id=WP_000706344.1;transl_table=11 NZ_JJLR01000016.1 RefSeq gene 7323 7590 . + . ID=gene-AC57_RS20835;Name=AC57_RS20835;end_range=7590,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20835;old_locus_tag=AC57_0479;partial=true NZ_JJLR01000016.1 Protein Homology CDS 7323 7590 . + 0 ID=cds-WP_001483704.1;Parent=gene-AC57_RS20835;Dbxref=GenBank:WP_001483704.1;Name=WP_001483704.1;end_range=7590,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20835;partial=true;product=IS1-like element transposase;protein_id=WP_001483704.1;transl_table=11 ##sequence-region NZ_JJLR01000017.1 1 18588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000017.1 RefSeq region 1 18588 . + . ID=NZ_JJLR01000017.1:1..18588;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000017.1 RefSeq pseudogene 1 285 . + . ID=gene-AC57_RS20830;Name=AC57_RS20830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20830;old_locus_tag=AC57_0480;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000017.1 Protein Homology CDS 1 285 . + 0 ID=cds-AC57_RS20830;Parent=gene-AC57_RS20830;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20830;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 337 1122 . - . ID=gene-AC57_RS20825;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AC57_RS20825;old_locus_tag=AC57_0481 NZ_JJLR01000017.1 Protein Homology CDS 337 1122 . - 0 ID=cds-WP_000540947.1;Parent=gene-AC57_RS20825;Dbxref=GenBank:WP_000540947.1;Name=WP_000540947.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308604.1;locus_tag=AC57_RS20825;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540947.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 1133 2368 . - . ID=gene-AC57_RS20820;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AC57_RS20820;old_locus_tag=AC57_0482 NZ_JJLR01000017.1 Protein Homology CDS 1133 2368 . - 0 ID=cds-WP_032237601.1;Parent=gene-AC57_RS20820;Dbxref=GenBank:WP_032237601.1;Name=WP_032237601.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415049.1;locus_tag=AC57_RS20820;product=allantoate deiminase;protein_id=WP_032237601.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 2390 3439 . - . ID=gene-AC57_RS20815;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AC57_RS20815;old_locus_tag=AC57_0483 NZ_JJLR01000017.1 Protein Homology CDS 2390 3439 . - 0 ID=cds-WP_000703889.1;Parent=gene-AC57_RS20815;Dbxref=GenBank:WP_000703889.1;Name=WP_000703889.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308606.1;locus_tag=AC57_RS20815;product=ureidoglycolate dehydrogenase;protein_id=WP_000703889.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 3756 5423 . + . ID=gene-AC57_RS20810;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AC57_RS20810;old_locus_tag=AC57_0484 NZ_JJLR01000017.1 Protein Homology CDS 3756 5423 . + 0 ID=cds-WP_000580893.1;Parent=gene-AC57_RS20810;Dbxref=GenBank:WP_000580893.1;Name=WP_000580893.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415051.1;locus_tag=AC57_RS20810;product=acyl-CoA synthetase FdrA;protein_id=WP_000580893.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 5433 6692 . + . ID=gene-AC57_RS20805;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AC57_RS20805;old_locus_tag=AC57_0485 NZ_JJLR01000017.1 Protein Homology CDS 5433 6692 . + 0 ID=cds-WP_032279988.1;Parent=gene-AC57_RS20805;Dbxref=GenBank:WP_032279988.1;Name=WP_032279988.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AC57_RS20805;product=DUF1116 domain-containing protein;protein_id=WP_032279988.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 6703 7518 . + . ID=gene-AC57_RS20800;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AC57_RS20800;old_locus_tag=AC57_0486 NZ_JJLR01000017.1 Protein Homology CDS 6703 7518 . + 0 ID=cds-WP_001306952.1;Parent=gene-AC57_RS20800;Dbxref=GenBank:WP_001306952.1;Name=WP_001306952.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AC57_RS20800;product=DUF2877 domain-containing protein;protein_id=WP_001306952.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 7515 8408 . + . ID=gene-AC57_RS20795;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AC57_RS20795;old_locus_tag=AC57_0487 NZ_JJLR01000017.1 Protein Homology CDS 7515 8408 . + 0 ID=cds-WP_000855384.1;Parent=gene-AC57_RS20795;Dbxref=GenBank:WP_000855384.1;Name=WP_000855384.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706399.1;locus_tag=AC57_RS20795;product=carbamate kinase;protein_id=WP_000855384.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 8603 9670 . - . ID=gene-AC57_RS20790;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AC57_RS20790;old_locus_tag=AC57_0488 NZ_JJLR01000017.1 Protein Homology CDS 8603 9670 . - 0 ID=cds-WP_000815566.1;Parent=gene-AC57_RS20790;Dbxref=GenBank:WP_000815566.1;Name=WP_000815566.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415055.1;locus_tag=AC57_RS20790;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_000815566.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 9667 10176 . - . ID=gene-AC57_RS20785;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AC57_RS20785;old_locus_tag=AC57_0489 NZ_JJLR01000017.1 Protein Homology CDS 9667 10176 . - 0 ID=cds-WP_001295318.1;Parent=gene-AC57_RS20785;Dbxref=GenBank:WP_001295318.1;Name=WP_001295318.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AC57_RS20785;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 10294 11016 . - . ID=gene-AC57_RS20780;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AC57_RS20780;old_locus_tag=AC57_0490 NZ_JJLR01000017.1 Protein Homology CDS 10294 11016 . - 0 ID=cds-WP_000212247.1;Parent=gene-AC57_RS20780;Dbxref=GenBank:WP_000212247.1;Name=WP_000212247.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415057.1;locus_tag=AC57_RS20780;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_000212247.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 11019 11513 . - . ID=gene-AC57_RS20775;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AC57_RS20775;old_locus_tag=AC57_0491 NZ_JJLR01000017.1 Protein Homology CDS 11019 11513 . - 0 ID=cds-WP_000255997.1;Parent=gene-AC57_RS20775;Dbxref=GenBank:WP_000255997.1;Name=WP_000255997.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AC57_RS20775;product=peptidylprolyl isomerase B;protein_id=WP_000255997.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 11687 13072 . + . ID=gene-AC57_RS20770;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AC57_RS20770;old_locus_tag=AC57_0492 NZ_JJLR01000017.1 Protein Homology CDS 11687 13072 . + 0 ID=cds-WP_000912345.1;Parent=gene-AC57_RS20770;Dbxref=GenBank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AC57_RS20770;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 13108 13629 . - . ID=gene-AC57_RS20765;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=AC57_RS20765;old_locus_tag=AC57_0493 NZ_JJLR01000017.1 Protein Homology CDS 13108 13629 . - 0 ID=cds-WP_001143558.1;Parent=gene-AC57_RS20765;Dbxref=GenBank:WP_001143558.1;Name=WP_001143558.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;gene=ybcI;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308616.1;locus_tag=AC57_RS20765;product=metal-dependent hydrolase;protein_id=WP_001143558.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 13737 13949 . - . ID=gene-AC57_RS20760;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AC57_RS20760;old_locus_tag=AC57_0494 NZ_JJLR01000017.1 Protein Homology CDS 13737 13949 . - 0 ID=cds-WP_000190288.1;Parent=gene-AC57_RS20760;Dbxref=GenBank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AC57_RS20760;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 13951 14817 . - . ID=gene-AC57_RS20755;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AC57_RS20755;old_locus_tag=AC57_0495 NZ_JJLR01000017.1 Protein Homology CDS 13951 14817 . - 0 ID=cds-WP_000729160.1;Parent=gene-AC57_RS20755;Dbxref=GenBank:WP_000729160.1;Name=WP_000729160.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415062.1;locus_tag=AC57_RS20755;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729160.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 15288 15830 . + . ID=gene-AC57_RS20750;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AC57_RS20750;old_locus_tag=AC57_0496 NZ_JJLR01000017.1 Protein Homology CDS 15288 15830 . + 0 ID=cds-WP_000776555.1;Parent=gene-AC57_RS20750;Dbxref=GenBank:WP_000776555.1;Name=WP_000776555.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AC57_RS20750;product=type 1 fimbrial major subunit FimA;protein_id=WP_000776555.1;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 16050 16742 . + . ID=gene-AC57_RS20745;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AC57_RS20745;old_locus_tag=AC57_0498 NZ_JJLR01000017.1 Protein Homology CDS 16050 16742 . + 0 ID=cds-WP_032237599.1;Parent=gene-AC57_RS20745;Dbxref=GenBank:WP_032237599.1;Name=WP_032237599.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AC57_RS20745;product=type 1 fimbria chaperone FimC;protein_id=WP_032237599.1;transl_table=11 NZ_JJLR01000017.1 RefSeq pseudogene 16773 18281 . + . ID=gene-AC57_RS20740;Name=fimD;end_range=18281,.;gbkey=Gene;gene=fimD;gene_biotype=pseudogene;locus_tag=AC57_RS20740;old_locus_tag=AC57_0499;partial=true;pseudo=true NZ_JJLR01000017.1 Protein Homology CDS 16773 18281 . + 0 ID=cds-AC57_RS20740;Parent=gene-AC57_RS20740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18281,.;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AC57_RS20740;partial=true;product=outer membrane usher protein FimD;pseudo=true;transl_table=11 NZ_JJLR01000017.1 RefSeq gene 18337 18588 . + . ID=gene-AC57_RS26530;Name=AC57_RS26530;end_range=18588,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26530;old_locus_tag=AC57_0500;partial=true NZ_JJLR01000017.1 Protein Homology CDS 18337 18588 . + 0 ID=cds-WP_001483354.1;Parent=gene-AC57_RS26530;Dbxref=GenBank:WP_001483354.1;Name=WP_001483354.1;end_range=18588,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26530;partial=true;product=IS1-like element transposase;protein_id=WP_001483354.1;transl_table=11 ##sequence-region NZ_JJLR01000018.1 1 8573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000018.1 RefSeq region 1 8573 . + . ID=NZ_JJLR01000018.1:1..8573;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000018.1 RefSeq gene 1 270 . + . ID=gene-AC57_RS20735;Name=AC57_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20735;old_locus_tag=AC57_0501;partial=true;start_range=.,1 NZ_JJLR01000018.1 Protein Homology CDS 1 270 . + 0 ID=cds-WP_000317619.1;Parent=gene-AC57_RS20735;Dbxref=GenBank:WP_000317619.1;Name=WP_000317619.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20735;partial=true;product=IS1 family transposase;protein_id=WP_000317619.1;start_range=.,1;transl_table=11 NZ_JJLR01000018.1 RefSeq pseudogene 280 510 . - . ID=gene-AC57_RS0123190;Name=AC57_RS0123190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123190;partial=true;pseudo=true;start_range=.,280 NZ_JJLR01000018.1 Protein Homology CDS 280 510 . - 0 ID=cds-AC57_RS0123190;Parent=gene-AC57_RS0123190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AC57_RS0123190;partial=true;product=response regulator;pseudo=true;start_range=.,280;transl_table=11 NZ_JJLR01000018.1 RefSeq gene 753 829 . + . ID=gene-AC57_RS20730;Name=AC57_RS20730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20730;old_locus_tag=AC57_0502 NZ_JJLR01000018.1 tRNAscan-SE tRNA 753 829 . + . ID=rna-AC57_RS20730;Parent=gene-AC57_RS20730;anticodon=(pos:787..789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20730;product=tRNA-Arg NZ_JJLR01000018.1 tRNAscan-SE exon 753 829 . + . ID=exon-AC57_RS20730-1;Parent=rna-AC57_RS20730;anticodon=(pos:787..789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20730;product=tRNA-Arg NZ_JJLR01000018.1 RefSeq gene 875 1636 . - . ID=gene-AC57_RS20725;Name=envY;gbkey=Gene;gene=envY;gene_biotype=protein_coding;locus_tag=AC57_RS20725;old_locus_tag=AC57_0503 NZ_JJLR01000018.1 Protein Homology CDS 875 1636 . - 0 ID=cds-WP_032237597.1;Parent=gene-AC57_RS20725;Dbxref=GenBank:WP_032237597.1;Name=WP_032237597.1;gbkey=CDS;gene=envY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308625.1;locus_tag=AC57_RS20725;product=DNA-binding transcriptional regulator EnvY;protein_id=WP_032237597.1;transl_table=11 NZ_JJLR01000018.1 RefSeq gene 1819 2709 . - . ID=gene-AC57_RS20720;Name=ybcH;gbkey=Gene;gene=ybcH;gene_biotype=protein_coding;locus_tag=AC57_RS20720;old_locus_tag=AC57_0504 NZ_JJLR01000018.1 Protein Homology CDS 1819 2709 . - 0 ID=cds-WP_001224575.1;Parent=gene-AC57_RS20720;Dbxref=GenBank:WP_001224575.1;Name=WP_001224575.1;gbkey=CDS;gene=ybcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308626.1;locus_tag=AC57_RS20720;product=DUF4434 family protein;protein_id=WP_001224575.1;transl_table=11 NZ_JJLR01000018.1 RefSeq gene 2710 5682 . - . ID=gene-AC57_RS20715;Name=nfrA;gbkey=Gene;gene=nfrA;gene_biotype=protein_coding;locus_tag=AC57_RS20715;old_locus_tag=AC57_0505 NZ_JJLR01000018.1 Protein Homology CDS 2710 5682 . - 0 ID=cds-WP_032285639.1;Parent=gene-AC57_RS20715;Dbxref=GenBank:WP_032285639.1;Name=WP_032285639.1;gbkey=CDS;gene=nfrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415100.1;locus_tag=AC57_RS20715;product=bacteriophage adsorption protein NfrA;protein_id=WP_032285639.1;transl_table=11 NZ_JJLR01000018.1 RefSeq pseudogene 5669 7905 . - . ID=gene-AC57_RS0123195;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=pseudogene;locus_tag=AC57_RS0123195;old_locus_tag=AC57_0507;pseudo=true NZ_JJLR01000018.1 Protein Homology CDS 5669 7905 . - 0 ID=cds-AC57_RS0123195;Parent=gene-AC57_RS0123195;Note=frameshifted%3B internal stop;gbkey=CDS;gene=nrfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=AC57_RS0123195;product=cyclic di-3'%2C5'-guanylate-activated glycosyltransferase NrfB;pseudo=true;transl_table=11 NZ_JJLR01000018.1 RefSeq pseudogene 8176 8295 . - . ID=gene-AC57_RS29605;Name=AC57_RS29605;end_range=8295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29605;partial=true;pseudo=true NZ_JJLR01000018.1 Protein Homology CDS 8176 8295 . - 0 ID=cds-AC57_RS29605;Parent=gene-AC57_RS29605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS29605;partial=true;product=ISAs1 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000018.1 RefSeq gene 8312 8573 . - . ID=gene-AC57_RS20710;Name=AC57_RS20710;end_range=8573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20710;old_locus_tag=AC57_0509;partial=true NZ_JJLR01000018.1 Protein Homology CDS 8312 8573 . - 1 ID=cds-WP_000317683.1;Parent=gene-AC57_RS20710;Dbxref=GenBank:WP_000317683.1;Name=WP_000317683.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=8573,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20710;partial=true;product=IS1 family transposase;protein_id=WP_000317683.1;transl_table=11 ##sequence-region NZ_JJLR01000019.1 1 8327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000019.1 RefSeq region 1 8327 . + . ID=NZ_JJLR01000019.1:1..8327;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000019.1 RefSeq gene 1 208 . - . ID=gene-AC57_RS0123200;Name=AC57_RS0123200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123200;old_locus_tag=AC57_0510;partial=true;start_range=.,1 NZ_JJLR01000019.1 Protein Homology CDS 1 208 . - 0 ID=cds-WP_000179203.1;Parent=gene-AC57_RS0123200;Dbxref=GenBank:WP_000179203.1;Name=WP_000179203.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558261.1;locus_tag=AC57_RS0123200;partial=true;product=IS1 family transposase;protein_id=WP_000179203.1;start_range=.,1;transl_table=11 NZ_JJLR01000019.1 RefSeq pseudogene 264 755 . - . ID=gene-AC57_RS20705;Name=AC57_RS20705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20705;old_locus_tag=AC57_0511;partial=true;pseudo=true;start_range=.,264 NZ_JJLR01000019.1 Protein Homology CDS 264 755 . - 0 ID=cds-AC57_RS20705;Parent=gene-AC57_RS20705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS20705;partial=true;product=ISAs1 family transposase;pseudo=true;start_range=.,264;transl_table=11 NZ_JJLR01000019.1 RefSeq gene 1720 2007 . - . ID=gene-AC57_RS30620;Name=AC57_RS30620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30620 NZ_JJLR01000019.1 Protein Homology CDS 1720 2007 . - 0 ID=cds-WP_001021473.1;Parent=gene-AC57_RS30620;Dbxref=GenBank:WP_001021473.1;Name=WP_001021473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001021472.1;locus_tag=AC57_RS30620;product=hypothetical protein;protein_id=WP_001021473.1;transl_table=11 NZ_JJLR01000019.1 RefSeq gene 2007 2267 . - . ID=gene-AC57_RS0123210;Name=AC57_RS0123210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123210 NZ_JJLR01000019.1 Protein Homology CDS 2007 2267 . - 0 ID=cds-WP_000889443.1;Parent=gene-AC57_RS0123210;Dbxref=GenBank:WP_000889443.1;Name=WP_000889443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889444.1;locus_tag=AC57_RS0123210;product=hypothetical protein;protein_id=WP_000889443.1;transl_table=11 NZ_JJLR01000019.1 RefSeq gene 2300 6817 . - . ID=gene-AC57_RS20695;Name=AC57_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20695;old_locus_tag=AC57_0513 NZ_JJLR01000019.1 Protein Homology CDS 2300 6817 . - 0 ID=cds-WP_032285640.1;Parent=gene-AC57_RS20695;Dbxref=GenBank:WP_032285640.1;Name=WP_032285640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001470092.1;locus_tag=AC57_RS20695;product=RHS repeat-associated core domain-containing protein;protein_id=WP_032285640.1;transl_table=11 NZ_JJLR01000019.1 RefSeq gene 6837 7298 . - . ID=gene-AC57_RS20690;Name=AC57_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20690;old_locus_tag=AC57_0514 NZ_JJLR01000019.1 Protein Homology CDS 6837 7298 . - 0 ID=cds-WP_001160804.1;Parent=gene-AC57_RS20690;Dbxref=GenBank:WP_001160804.1;Name=WP_001160804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308633.1;locus_tag=AC57_RS20690;product=DcrB-related protein;protein_id=WP_001160804.1;transl_table=11 NZ_JJLR01000019.1 RefSeq gene 7326 8327 . - . ID=gene-AC57_RS20685;Name=tssI;end_range=8327,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AC57_RS20685;old_locus_tag=AC57_0515;partial=true NZ_JJLR01000019.1 Protein Homology CDS 7326 8327 . - 0 ID=cds-WP_024202841.1;Parent=gene-AC57_RS20685;Dbxref=GenBank:WP_024202841.1;Name=WP_024202841.1;Ontology_term=GO:0033103;end_range=8327,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AC57_RS20685;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_024202841.1;transl_table=11 ##sequence-region NZ_JJLR01000020.1 1 15408 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000020.1 RefSeq region 1 15408 . + . ID=NZ_JJLR01000020.1:1..15408;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000020.1 RefSeq gene 1 251 . + . ID=gene-AC57_RS20680;Name=AC57_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20680;old_locus_tag=AC57_0516;partial=true;start_range=.,1 NZ_JJLR01000020.1 Protein Homology CDS 1 251 . + 2 ID=cds-WP_000674744.1-2;Parent=gene-AC57_RS20680;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20680;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;start_range=.,1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 394 1842 . - . ID=gene-AC57_RS20675;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AC57_RS20675;old_locus_tag=AC57_0517 NZ_JJLR01000020.1 Protein Homology CDS 394 1842 . - 0 ID=cds-WP_000253838.1;Parent=gene-AC57_RS20675;Dbxref=GenBank:WP_000253838.1;Name=WP_000253838.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739168.1;locus_tag=AC57_RS20675;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_000253838.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 1832 2515 . - . ID=gene-AC57_RS20670;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AC57_RS20670;old_locus_tag=AC57_0518 NZ_JJLR01000020.1 Protein Homology CDS 1832 2515 . - 0 ID=cds-WP_000770953.1;Parent=gene-AC57_RS20670;Dbxref=GenBank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AC57_RS20670;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 2672 4045 . + . ID=gene-AC57_RS20665;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AC57_RS20665;old_locus_tag=AC57_0520 NZ_JJLR01000020.1 Protein Homology CDS 2672 4045 . + 0 ID=cds-WP_000074234.1;Parent=gene-AC57_RS20665;Dbxref=GenBank:WP_000074234.1;Name=WP_000074234.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415104.1;locus_tag=AC57_RS20665;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_000074234.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 4203 4535 . + . ID=gene-AC57_RS20660;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AC57_RS20660;old_locus_tag=AC57_0521 NZ_JJLR01000020.1 Protein Homology CDS 4203 4535 . + 0 ID=cds-WP_000709870.1;Parent=gene-AC57_RS20660;Dbxref=GenBank:WP_000709870.1;Name=WP_000709870.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415105.1;locus_tag=AC57_RS20660;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_000709870.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 4551 5774 . + . ID=gene-AC57_RS20655;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AC57_RS20655;old_locus_tag=AC57_0522 NZ_JJLR01000020.1 Protein Homology CDS 4551 5774 . + 0 ID=cds-WP_000717157.1;Parent=gene-AC57_RS20655;Dbxref=GenBank:WP_000717157.1;Name=WP_000717157.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415106.1;locus_tag=AC57_RS20655;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_000717157.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 5786 8929 . + . ID=gene-AC57_RS20650;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AC57_RS20650;old_locus_tag=AC57_0523 NZ_JJLR01000020.1 Protein Homology CDS 5786 8929 . + 0 ID=cds-WP_032280011.1;Parent=gene-AC57_RS20650;Dbxref=GenBank:WP_032280011.1;Name=WP_032280011.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AC57_RS20650;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_032280011.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 9031 10407 . + . ID=gene-AC57_RS20645;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AC57_RS20645;old_locus_tag=AC57_0524 NZ_JJLR01000020.1 Protein Homology CDS 9031 10407 . + 0 ID=cds-WP_000786320.1;Parent=gene-AC57_RS20645;Dbxref=GenBank:WP_000786320.1;Name=WP_000786320.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AC57_RS20645;product=phenylalanine transporter;protein_id=WP_000786320.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 10475 11722 . - . ID=gene-AC57_RS20640;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AC57_RS20640;old_locus_tag=AC57_0525 NZ_JJLR01000020.1 Protein Homology CDS 10475 11722 . - 0 ID=cds-WP_001153148.1;Parent=gene-AC57_RS20640;Dbxref=GenBank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AC57_RS20640;product=mechanosensitive ion channel YbdG;protein_id=WP_001153148.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 11830 12483 . - . ID=gene-AC57_RS20635;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AC57_RS20635;old_locus_tag=AC57_0526 NZ_JJLR01000020.1 Protein Homology CDS 11830 12483 . - 0 ID=cds-WP_000351480.1;Parent=gene-AC57_RS20635;Dbxref=GenBank:WP_000351480.1;Name=WP_000351480.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=AC57_RS20635;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351480.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 12577 12945 . - . ID=gene-AC57_RS20630;Name=AC57_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20630;old_locus_tag=AC57_0527 NZ_JJLR01000020.1 Protein Homology CDS 12577 12945 . - 0 ID=cds-WP_000360951.1;Parent=gene-AC57_RS20630;Dbxref=GenBank:WP_000360951.1;Name=WP_000360951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AC57_RS20630;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000360951.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 13010 13258 . - . ID=gene-AC57_RS20625;Name=AC57_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20625;old_locus_tag=AC57_0528 NZ_JJLR01000020.1 Protein Homology CDS 13010 13258 . - 0 ID=cds-WP_000682524.1;Parent=gene-AC57_RS20625;Dbxref=GenBank:WP_000682524.1;Name=WP_000682524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=AC57_RS20625;product=DUF1158 domain-containing protein;protein_id=WP_000682524.1;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 13324 14442 . - . ID=gene-AC57_RS20620;Name=AC57_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20620;old_locus_tag=AC57_0529 NZ_JJLR01000020.1 Protein Homology CDS 13324 14442 . - 0 ID=cds-WP_001130653.1;Parent=gene-AC57_RS20620;Dbxref=GenBank:WP_001130653.1;Name=WP_001130653.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AC57_RS20620;product=YbdK family carboxylate-amine ligase;protein_id=WP_001130653.1;transl_table=11 NZ_JJLR01000020.1 RefSeq pseudogene 14658 14926 . - . ID=gene-AC57_RS31095;Name=AC57_RS31095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31095;pseudo=true NZ_JJLR01000020.1 Protein Homology CDS 14658 14926 . - 0 ID=cds-AC57_RS31095;Parent=gene-AC57_RS31095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008364.1;locus_tag=AC57_RS31095;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000020.1 RefSeq gene 14895 15047 . + . ID=gene-AC57_RS20615;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AC57_RS20615;old_locus_tag=AC57_0530 NZ_JJLR01000020.1 Protein Homology CDS 14895 15047 . + 0 ID=cds-WP_000956455.1;Parent=gene-AC57_RS20615;Dbxref=GenBank:WP_000956455.1;Name=WP_000956455.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025295.1;locus_tag=AC57_RS20615;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956455.1;transl_table=11 NZ_JJLR01000020.1 RefSeq pseudogene 15124 15408 . + . ID=gene-AC57_RS20610;Name=AC57_RS20610;end_range=15408,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20610;old_locus_tag=AC57_0531;partial=true;pseudo=true NZ_JJLR01000020.1 Protein Homology CDS 15124 15408 . + 0 ID=cds-AC57_RS20610;Parent=gene-AC57_RS20610;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=15408,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS20610;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000021.1 1 551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000021.1 RefSeq region 1 551 . + . ID=NZ_JJLR01000021.1:1..551;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000021.1 RefSeq pseudogene 1 551 . + . ID=gene-AC57_RS20605;Name=AC57_RS20605;end_range=551,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20605;old_locus_tag=AC57_0532;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000021.1 Protein Homology CDS 1 551 . + 1 ID=cds-AC57_RS20605;Parent=gene-AC57_RS20605;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=551,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS20605;partial=true;product=IS4-like element IS421 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000022.1 1 9424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000022.1 RefSeq region 1 9424 . + . ID=NZ_JJLR01000022.1:1..9424;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000022.1 RefSeq pseudogene 1 124 . + . ID=gene-AC57_RS0123220;Name=AC57_RS0123220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123220;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000022.1 Protein Homology CDS 1 124 . + 1 ID=cds-AC57_RS0123220;Parent=gene-AC57_RS0123220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0123220;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000022.1 RefSeq gene 406 1026 . - . ID=gene-AC57_RS20600;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AC57_RS20600;old_locus_tag=AC57_0534 NZ_JJLR01000022.1 Protein Homology CDS 406 1026 . - 0 ID=cds-WP_077756409.1;Parent=gene-AC57_RS20600;Dbxref=GenBank:WP_077756409.1;Name=WP_077756409.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AC57_RS20600;product=enterobactin synthase subunit EntD;protein_id=WP_077756409.1;transl_table=11 NZ_JJLR01000022.1 RefSeq gene 1201 3441 . - . ID=gene-AC57_RS20595;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AC57_RS20595;old_locus_tag=AC57_0535 NZ_JJLR01000022.1 Protein Homology CDS 1201 3441 . - 0 ID=cds-WP_032237956.1;Parent=gene-AC57_RS20595;Dbxref=GenBank:WP_032237956.1;Name=WP_032237956.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415116.1;locus_tag=AC57_RS20595;product=siderophore enterobactin receptor FepA;protein_id=WP_032237956.1;transl_table=11 NZ_JJLR01000022.1 RefSeq gene 3684 4886 . + . ID=gene-AC57_RS20590;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AC57_RS20590;old_locus_tag=AC57_0537 NZ_JJLR01000022.1 Protein Homology CDS 3684 4886 . + 0 ID=cds-WP_000125843.1;Parent=gene-AC57_RS20590;Dbxref=GenBank:WP_000125843.1;Name=WP_000125843.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415117.2;locus_tag=AC57_RS20590;product=enterochelin esterase;protein_id=WP_000125843.1;transl_table=11 NZ_JJLR01000022.1 RefSeq gene 4889 5107 . + . ID=gene-AC57_RS20585;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AC57_RS20585;old_locus_tag=AC57_0538 NZ_JJLR01000022.1 Protein Homology CDS 4889 5107 . + 0 ID=cds-WP_000885801.1;Parent=gene-AC57_RS20585;Dbxref=GenBank:WP_000885801.1;Name=WP_000885801.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588441.1;locus_tag=AC57_RS20585;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_000885801.1;transl_table=11 NZ_JJLR01000022.1 RefSeq gene 5104 8985 . + . ID=gene-AC57_RS20580;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AC57_RS20580;old_locus_tag=AC57_0539 NZ_JJLR01000022.1 Protein Homology CDS 5104 8985 . + 0 ID=cds-WP_032280049.1;Parent=gene-AC57_RS20580;Dbxref=GenBank:WP_032280049.1;Name=WP_032280049.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415118.1;locus_tag=AC57_RS20580;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_032280049.1;transl_table=11 NZ_JJLR01000022.1 RefSeq gene 9260 9424 . + . ID=gene-AC57_RS26560;Name=AC57_RS26560;end_range=9424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26560;old_locus_tag=AC57_0540;partial=true NZ_JJLR01000022.1 Protein Homology CDS 9260 9424 . + 0 ID=cds-WP_000179192.1;Parent=gene-AC57_RS26560;Dbxref=GenBank:WP_000179192.1;Name=WP_000179192.1;Ontology_term=GO:0006313;end_range=9424,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26560;partial=true;product=IS1 family transposase;protein_id=WP_000179192.1;transl_table=11 ##sequence-region NZ_JJLR01000023.1 1 57907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000023.1 RefSeq region 1 57907 . + . ID=NZ_JJLR01000023.1:1..57907;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000023.1 RefSeq pseudogene 1 285 . + . ID=gene-AC57_RS20575;Name=AC57_RS20575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20575;old_locus_tag=AC57_0541;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000023.1 Protein Homology CDS 1 285 . + 0 ID=cds-AC57_RS20575;Parent=gene-AC57_RS20575;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS20575;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000023.1 RefSeq pseudogene 300 470 . + . ID=gene-AC57_RS20570;Name=AC57_RS20570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS20570;old_locus_tag=AC57_0542;partial=true;pseudo=true;start_range=.,300 NZ_JJLR01000023.1 Protein Homology CDS 300 470 . + 0 ID=cds-AC57_RS20570;Parent=gene-AC57_RS20570;Note=in Salmonella is responsible for long O-antigen polymerization%3B may be part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415119.1;locus_tag=AC57_RS20570;partial=true;product=LPS O-antigen length regulator Wzz(fepE);pseudo=true;start_range=.,300;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 467 1282 . - . ID=gene-AC57_RS20565;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AC57_RS20565;old_locus_tag=AC57_0543 NZ_JJLR01000023.1 Protein Homology CDS 467 1282 . - 0 ID=cds-WP_000140646.1;Parent=gene-AC57_RS20565;Dbxref=GenBank:WP_000140646.1;Name=WP_000140646.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601847.1;locus_tag=AC57_RS20565;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_000140646.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 1279 2271 . - . ID=gene-AC57_RS20560;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AC57_RS20560;old_locus_tag=AC57_0544 NZ_JJLR01000023.1 Protein Homology CDS 1279 2271 . - 0 ID=cds-WP_032237439.1;Parent=gene-AC57_RS20560;Dbxref=GenBank:WP_032237439.1;Name=WP_032237439.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415121.1;locus_tag=AC57_RS20560;product=iron-enterobactin ABC transporter permease;protein_id=WP_032237439.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 2268 3272 . - . ID=gene-AC57_RS20555;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AC57_RS20555;old_locus_tag=AC57_0545 NZ_JJLR01000023.1 Protein Homology CDS 2268 3272 . - 0 ID=cds-WP_001298899.1;Parent=gene-AC57_RS20555;Dbxref=GenBank:WP_001298899.1;Name=WP_001298899.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308656.1;locus_tag=AC57_RS20555;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001298899.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 3383 4633 . + . ID=gene-AC57_RS20550;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AC57_RS20550;old_locus_tag=AC57_0546 NZ_JJLR01000023.1 Protein Homology CDS 3383 4633 . + 0 ID=cds-WP_032237440.1;Parent=gene-AC57_RS20550;Dbxref=GenBank:WP_032237440.1;Name=WP_032237440.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415123.1;locus_tag=AC57_RS20550;product=enterobactin transporter EntS;protein_id=WP_032237440.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 4637 5593 . - . ID=gene-AC57_RS20545;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AC57_RS20545;old_locus_tag=AC57_0547 NZ_JJLR01000023.1 Protein Homology CDS 4637 5593 . - 0 ID=cds-WP_001234311.1;Parent=gene-AC57_RS20545;Dbxref=GenBank:WP_001234311.1;Name=WP_001234311.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415124.1;locus_tag=AC57_RS20545;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_001234311.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 5968 7143 . + . ID=gene-AC57_RS20540;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AC57_RS20540;old_locus_tag=AC57_0548 NZ_JJLR01000023.1 Protein Homology CDS 5968 7143 . + 0 ID=cds-WP_032237441.1;Parent=gene-AC57_RS20540;Dbxref=GenBank:WP_032237441.1;Name=WP_032237441.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AC57_RS20540;product=isochorismate synthase EntC;protein_id=WP_032237441.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 7153 8763 . + . ID=gene-AC57_RS20535;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AC57_RS20535;old_locus_tag=AC57_0549 NZ_JJLR01000023.1 Protein Homology CDS 7153 8763 . + 0 ID=cds-WP_000026804.1;Parent=gene-AC57_RS20535;Dbxref=GenBank:WP_000026804.1;Name=WP_000026804.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415126.1;locus_tag=AC57_RS20535;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_000026804.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 8777 9634 . + . ID=gene-AC57_RS20530;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AC57_RS20530;old_locus_tag=AC57_0550 NZ_JJLR01000023.1 Protein Homology CDS 8777 9634 . + 0 ID=cds-WP_032258701.1;Parent=gene-AC57_RS20530;Dbxref=GenBank:WP_032258701.1;Name=WP_032258701.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AC57_RS20530;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_032258701.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 9634 10380 . + . ID=gene-AC57_RS20525;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AC57_RS20525;old_locus_tag=AC57_0551 NZ_JJLR01000023.1 Protein Homology CDS 9634 10380 . + 0 ID=cds-WP_000347664.1;Parent=gene-AC57_RS20525;Dbxref=GenBank:WP_000347664.1;Name=WP_000347664.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706451.2;locus_tag=AC57_RS20525;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_000347664.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 10383 10796 . + . ID=gene-AC57_RS20520;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AC57_RS20520;old_locus_tag=AC57_0552 NZ_JJLR01000023.1 Protein Homology CDS 10383 10796 . + 0 ID=cds-WP_000637953.1;Parent=gene-AC57_RS20520;Dbxref=GenBank:WP_000637953.1;Name=WP_000637953.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AC57_RS20520;product=proofreading thioesterase EntH;protein_id=WP_000637953.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 10977 13082 . + . ID=gene-AC57_RS20515;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AC57_RS20515;old_locus_tag=AC57_0553 NZ_JJLR01000023.1 Protein Homology CDS 10977 13082 . + 0 ID=cds-WP_001043156.1;Parent=gene-AC57_RS20515;Dbxref=GenBank:WP_001043156.1;Name=WP_001043156.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AC57_RS20515;product=pyruvate/proton symporter CstA;protein_id=WP_001043156.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 13265 13462 . + . ID=gene-AC57_RS20510;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AC57_RS20510;old_locus_tag=AC57_0554 NZ_JJLR01000023.1 Protein Homology CDS 13265 13462 . + 0 ID=cds-WP_000460431.1;Parent=gene-AC57_RS20510;Dbxref=GenBank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AC57_RS20510;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 13472 14560 . - . ID=gene-AC57_RS20505;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AC57_RS20505;old_locus_tag=AC57_0555 NZ_JJLR01000023.1 Protein Homology CDS 13472 14560 . - 0 ID=cds-WP_001120441.1;Parent=gene-AC57_RS20505;Dbxref=GenBank:WP_001120441.1;Name=WP_001120441.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415132.1;locus_tag=AC57_RS20505;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_001120441.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 14669 15829 . + . ID=gene-AC57_RS20500;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AC57_RS20500;old_locus_tag=AC57_0556 NZ_JJLR01000023.1 Protein Homology CDS 14669 15829 . + 0 ID=cds-WP_000183907.1;Parent=gene-AC57_RS20500;Dbxref=GenBank:WP_000183907.1;Name=WP_000183907.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415133.1;locus_tag=AC57_RS20500;product=methionine-oxo-acid transaminase;protein_id=WP_000183907.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 15830 16459 . - . ID=gene-AC57_RS20495;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=AC57_RS20495;old_locus_tag=AC57_0557 NZ_JJLR01000023.1 Protein Homology CDS 15830 16459 . - 0 ID=cds-WP_000502945.1;Parent=gene-AC57_RS20495;Dbxref=GenBank:WP_000502945.1;Name=WP_000502945.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415134.1;locus_tag=AC57_RS20495;product=IbrB-like domain-containing protein;protein_id=WP_000502945.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 16432 17652 . - . ID=gene-AC57_RS20490;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=AC57_RS20490;old_locus_tag=AC57_0558 NZ_JJLR01000023.1 Protein Homology CDS 16432 17652 . - 0 ID=cds-WP_032237443.1;Parent=gene-AC57_RS20490;Dbxref=GenBank:WP_032237443.1;Name=WP_032237443.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415135.1;locus_tag=AC57_RS20490;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_032237443.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 17799 18701 . - . ID=gene-AC57_RS20485;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=AC57_RS20485;old_locus_tag=AC57_0559 NZ_JJLR01000023.1 Protein Homology CDS 17799 18701 . - 0 ID=cds-WP_032237444.1;Parent=gene-AC57_RS20485;Dbxref=GenBank:WP_032237444.1;Name=WP_032237444.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415136.1;locus_tag=AC57_RS20485;product=DNA-binding transcriptional repressor CitR;protein_id=WP_032237444.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 18910 19656 . - . ID=gene-AC57_RS20480;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AC57_RS20480;old_locus_tag=AC57_0560 NZ_JJLR01000023.1 Protein Homology CDS 18910 19656 . - 0 ID=cds-WP_000913829.1;Parent=gene-AC57_RS20480;Dbxref=GenBank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AC57_RS20480;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 20028 20591 . + . ID=gene-AC57_RS20475;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AC57_RS20475;old_locus_tag=AC57_0561 NZ_JJLR01000023.1 Protein Homology CDS 20028 20591 . + 0 ID=cds-WP_000052796.1;Parent=gene-AC57_RS20475;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AC57_RS20475;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 20836 22401 . + . ID=gene-AC57_RS20470;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AC57_RS20470;old_locus_tag=AC57_0563 NZ_JJLR01000023.1 Protein Homology CDS 20836 22401 . + 0 ID=cds-WP_000887629.1;Parent=gene-AC57_RS20470;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AC57_RS20470;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 22522 22950 . - . ID=gene-AC57_RS20465;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AC57_RS20465;old_locus_tag=AC57_0564 NZ_JJLR01000023.1 Protein Homology CDS 22522 22950 . - 0 ID=cds-WP_000278509.1;Parent=gene-AC57_RS20465;Dbxref=GenBank:WP_000278509.1;Name=WP_000278509.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415140.1;locus_tag=AC57_RS20465;product=universal stress protein UspG;protein_id=WP_000278509.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 23171 24409 . + . ID=gene-AC57_RS20460;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AC57_RS20460;old_locus_tag=AC57_0565 NZ_JJLR01000023.1 Protein Homology CDS 23171 24409 . + 0 ID=cds-WP_000646137.1;Parent=gene-AC57_RS20460;Dbxref=GenBank:WP_000646137.1;Name=WP_000646137.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415141.1;locus_tag=AC57_RS20460;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646137.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 24413 24601 . - . ID=gene-AC57_RS31170;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AC57_RS31170;old_locus_tag=AC57_0566 NZ_JJLR01000023.1 Protein Homology CDS 24413 24601 . - 0 ID=cds-WP_001301130.1;Parent=gene-AC57_RS31170;Dbxref=GenBank:WP_001301130.1;Name=WP_001301130.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AC57_RS31170;product=small membrane protein YldA;protein_id=WP_001301130.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 24640 25050 . - . ID=gene-AC57_RS20455;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AC57_RS20455;old_locus_tag=AC57_0567 NZ_JJLR01000023.1 Protein Homology CDS 24640 25050 . - 0 ID=cds-WP_000089731.1;Parent=gene-AC57_RS20455;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AC57_RS20455;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 25280 26086 . - . ID=gene-AC57_RS20450;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AC57_RS20450;old_locus_tag=AC57_0568 NZ_JJLR01000023.1 Protein Homology CDS 25280 26086 . - 0 ID=cds-WP_000643397.1;Parent=gene-AC57_RS20450;Dbxref=GenBank:WP_000643397.1;Name=WP_000643397.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415144.1;locus_tag=AC57_RS20450;product=ribonuclease I;protein_id=WP_000643397.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 26200 27663 . - . ID=gene-AC57_RS20445;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AC57_RS20445;old_locus_tag=AC57_0569 NZ_JJLR01000023.1 Protein Homology CDS 26200 27663 . - 0 ID=cds-WP_001432638.1;Parent=gene-AC57_RS20445;Dbxref=GenBank:WP_001432638.1;Name=WP_001432638.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AC57_RS20445;product=citrate/succinate antiporter CitT;protein_id=WP_001432638.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 27714 28592 . - . ID=gene-AC57_RS20440;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AC57_RS20440;old_locus_tag=AC57_0570 NZ_JJLR01000023.1 Protein Homology CDS 27714 28592 . - 0 ID=cds-WP_000062457.1;Parent=gene-AC57_RS20440;Dbxref=GenBank:WP_000062457.1;Name=WP_000062457.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AC57_RS20440;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_000062457.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 28567 29118 . - . ID=gene-AC57_RS20435;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AC57_RS20435;old_locus_tag=AC57_0571 NZ_JJLR01000023.1 Protein Homology CDS 28567 29118 . - 0 ID=cds-WP_000550414.1;Parent=gene-AC57_RS20435;Dbxref=GenBank:WP_000550414.1;Name=WP_000550414.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AC57_RS20435;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_000550414.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 29122 30654 . - . ID=gene-AC57_RS20430;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AC57_RS20430;old_locus_tag=AC57_0572 NZ_JJLR01000023.1 Protein Homology CDS 29122 30654 . - 0 ID=cds-WP_000192245.1;Parent=gene-AC57_RS20430;Dbxref=GenBank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AC57_RS20430;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 30665 31573 . - . ID=gene-AC57_RS20425;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AC57_RS20425;old_locus_tag=AC57_0573 NZ_JJLR01000023.1 Protein Homology CDS 30665 31573 . - 0 ID=cds-WP_000622357.1;Parent=gene-AC57_RS20425;Dbxref=GenBank:WP_000622357.1;Name=WP_000622357.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AC57_RS20425;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_000622357.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 31570 31866 . - . ID=gene-AC57_RS20420;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AC57_RS20420;old_locus_tag=AC57_0574 NZ_JJLR01000023.1 Protein Homology CDS 31570 31866 . - 0 ID=cds-WP_000700703.1;Parent=gene-AC57_RS20420;Dbxref=GenBank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AC57_RS20420;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 31881 32939 . - . ID=gene-AC57_RS20415;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AC57_RS20415;old_locus_tag=AC57_0575 NZ_JJLR01000023.1 Protein Homology CDS 31881 32939 . - 0 ID=cds-WP_000467705.1;Parent=gene-AC57_RS20415;Dbxref=GenBank:WP_000467705.1;Name=WP_000467705.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AC57_RS20415;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467705.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 33319 34977 . + . ID=gene-AC57_RS20410;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AC57_RS20410;old_locus_tag=AC57_0576 NZ_JJLR01000023.1 Protein Homology CDS 33319 34977 . + 0 ID=cds-WP_000939767.1;Parent=gene-AC57_RS20410;Dbxref=GenBank:WP_000939767.1;Name=WP_000939767.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415152.1;locus_tag=AC57_RS20410;product=sensor histidine kinase DpiB;protein_id=WP_000939767.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 34946 35626 . + . ID=gene-AC57_RS20405;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AC57_RS20405;old_locus_tag=AC57_0577 NZ_JJLR01000023.1 Protein Homology CDS 34946 35626 . + 0 ID=cds-WP_000126500.1;Parent=gene-AC57_RS20405;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AC57_RS20405;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 35667 37052 . - . ID=gene-AC57_RS20400;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC57_RS20400;old_locus_tag=AC57_0578 NZ_JJLR01000023.1 Protein Homology CDS 35667 37052 . - 0 ID=cds-WP_000955063.1;Parent=gene-AC57_RS20400;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AC57_RS20400;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 37640 38200 . + . ID=gene-AC57_RS20395;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AC57_RS20395;old_locus_tag=AC57_0579 NZ_JJLR01000023.1 Protein Homology CDS 37640 38200 . + 0 ID=cds-WP_032279653.1;Parent=gene-AC57_RS20395;Dbxref=GenBank:WP_032279653.1;Name=WP_032279653.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AC57_RS20395;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_032279653.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 38375 38584 . + . ID=gene-AC57_RS20390;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC57_RS20390;old_locus_tag=AC57_0580 NZ_JJLR01000023.1 Protein Homology CDS 38375 38584 . + 0 ID=cds-WP_000034825.1;Parent=gene-AC57_RS20390;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AC57_RS20390;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 38638 39021 . - . ID=gene-AC57_RS20385;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AC57_RS20385;old_locus_tag=AC57_0581 NZ_JJLR01000023.1 Protein Homology CDS 38638 39021 . - 0 ID=cds-WP_000939749.1;Parent=gene-AC57_RS20385;Dbxref=GenBank:WP_000939749.1;Name=WP_000939749.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=AC57_RS20385;product=fluoride efflux transporter CrcB;protein_id=WP_000939749.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 39114 39902 . + . ID=gene-AC57_RS20380;Name=AC57_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20380;old_locus_tag=AC57_0582 NZ_JJLR01000023.1 Protein Homology CDS 39114 39902 . + 0 ID=cds-WP_000959109.1;Parent=gene-AC57_RS20380;Dbxref=GenBank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AC57_RS20380;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 40031 40234 . + . ID=gene-AC57_RS20375;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AC57_RS20375;old_locus_tag=AC57_0583 NZ_JJLR01000023.1 Protein Homology CDS 40031 40234 . + 0 ID=cds-WP_000503931.1;Parent=gene-AC57_RS20375;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AC57_RS20375;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 40335 41300 . - . ID=gene-AC57_RS20370;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AC57_RS20370;old_locus_tag=AC57_0584 NZ_JJLR01000023.1 Protein Homology CDS 40335 41300 . - 0 ID=cds-WP_000042622.1;Parent=gene-AC57_RS20370;Dbxref=GenBank:WP_000042622.1;Name=WP_000042622.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AC57_RS20370;product=lipoyl synthase;protein_id=WP_000042622.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 41509 42462 . - . ID=gene-AC57_RS20365;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AC57_RS20365;old_locus_tag=AC57_0585 NZ_JJLR01000023.1 Protein Homology CDS 41509 42462 . - 0 ID=cds-WP_001619222.1;Parent=gene-AC57_RS20365;Dbxref=GenBank:WP_001619222.1;Name=WP_001619222.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415162.4;locus_tag=AC57_RS20365;product=YbeF family transcriptional regulator;protein_id=WP_001619222.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 42721 43362 . - . ID=gene-AC57_RS20360;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AC57_RS20360;old_locus_tag=AC57_0586 NZ_JJLR01000023.1 Protein Homology CDS 42721 43362 . - 0 ID=cds-WP_000284027.1;Parent=gene-AC57_RS20360;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AC57_RS20360;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 43463 43726 . - . ID=gene-AC57_RS20355;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AC57_RS20355;old_locus_tag=AC57_0587 NZ_JJLR01000023.1 Protein Homology CDS 43463 43726 . - 0 ID=cds-WP_032237447.1;Parent=gene-AC57_RS20355;Dbxref=GenBank:WP_032237447.1;Name=WP_032237447.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AC57_RS20355;product=DUF493 family protein YbeD;protein_id=WP_032237447.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 43836 45047 . - . ID=gene-AC57_RS20350;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AC57_RS20350;old_locus_tag=AC57_0588 NZ_JJLR01000023.1 Protein Homology CDS 43836 45047 . - 0 ID=cds-WP_001092082.1;Parent=gene-AC57_RS20350;Dbxref=GenBank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AC57_RS20350;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 45186 46274 . - . ID=gene-AC57_RS20345;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AC57_RS20345;old_locus_tag=AC57_0590 NZ_JJLR01000023.1 Protein Homology CDS 45186 46274 . - 0 ID=cds-WP_001619223.1;Parent=gene-AC57_RS20345;Dbxref=GenBank:WP_001619223.1;Name=WP_001619223.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415166.1;locus_tag=AC57_RS20345;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_001619223.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 46285 47397 . - . ID=gene-AC57_RS20340;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AC57_RS20340;old_locus_tag=AC57_0591 NZ_JJLR01000023.1 Protein Homology CDS 46285 47397 . - 0 ID=cds-WP_032237449.1;Parent=gene-AC57_RS20340;Dbxref=GenBank:WP_032237449.1;Name=WP_032237449.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AC57_RS20340;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_032237449.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 47400 49301 . - . ID=gene-AC57_RS20335;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AC57_RS20335;old_locus_tag=AC57_0592 NZ_JJLR01000023.1 Protein Homology CDS 47400 49301 . - 0 ID=cds-WP_000776191.1;Parent=gene-AC57_RS20335;Dbxref=GenBank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AC57_RS20335;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 49332 49799 . - . ID=gene-AC57_RS20330;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AC57_RS20330;old_locus_tag=AC57_0593 NZ_JJLR01000023.1 Protein Homology CDS 49332 49799 . - 0 ID=cds-WP_000776104.1;Parent=gene-AC57_RS20330;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AC57_RS20330;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 49803 50120 . - . ID=gene-AC57_RS20325;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AC57_RS20325;old_locus_tag=AC57_0594 NZ_JJLR01000023.1 Protein Homology CDS 49803 50120 . - 0 ID=cds-WP_001161664.1;Parent=gene-AC57_RS20325;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AC57_RS20325;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 50380 50991 . - . ID=gene-AC57_RS20320;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AC57_RS20320;old_locus_tag=AC57_0595 NZ_JJLR01000023.1 Protein Homology CDS 50380 50991 . - 0 ID=cds-WP_001241883.1;Parent=gene-AC57_RS20320;Dbxref=GenBank:WP_001241883.1;Name=WP_001241883.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308703.1;locus_tag=AC57_RS20320;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_001241883.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 51015 51656 . - . ID=gene-AC57_RS20315;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AC57_RS20315;old_locus_tag=AC57_0596 NZ_JJLR01000023.1 Protein Homology CDS 51015 51656 . - 0 ID=cds-WP_000838889.1;Parent=gene-AC57_RS20315;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AC57_RS20315;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 51658 52689 . - . ID=gene-AC57_RS20310;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AC57_RS20310;old_locus_tag=AC57_0597 NZ_JJLR01000023.1 Protein Homology CDS 51658 52689 . - 0 ID=cds-WP_000620529.1;Parent=gene-AC57_RS20310;Dbxref=GenBank:WP_000620529.1;Name=WP_000620529.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=AC57_RS20310;product=DNA polymerase III subunit delta;protein_id=WP_000620529.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 52689 53270 . - . ID=gene-AC57_RS20305;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AC57_RS20305;old_locus_tag=AC57_0598 NZ_JJLR01000023.1 Protein Homology CDS 52689 53270 . - 0 ID=cds-WP_032237450.1;Parent=gene-AC57_RS20305;Dbxref=GenBank:WP_032237450.1;Name=WP_032237450.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AC57_RS20305;product=LPS assembly lipoprotein LptE;protein_id=WP_032237450.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 53285 55867 . - . ID=gene-AC57_RS20300;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AC57_RS20300;old_locus_tag=AC57_0599 NZ_JJLR01000023.1 Protein Homology CDS 53285 55867 . - 0 ID=cds-WP_032246286.1;Parent=gene-AC57_RS20300;Dbxref=GenBank:WP_032246286.1;Name=WP_032246286.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AC57_RS20300;product=leucine--tRNA ligase;protein_id=WP_032246286.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 56102 56584 . + . ID=gene-AC57_RS20295;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AC57_RS20295;old_locus_tag=AC57_0600 NZ_JJLR01000023.1 Protein Homology CDS 56102 56584 . + 0 ID=cds-WP_001044880.1;Parent=gene-AC57_RS20295;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AC57_RS20295;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 56649 57626 . - . ID=gene-AC57_RS20290;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=AC57_RS20290;old_locus_tag=AC57_0601 NZ_JJLR01000023.1 Protein Homology CDS 56649 57626 . - 0 ID=cds-WP_032237451.1;Parent=gene-AC57_RS20290;Dbxref=GenBank:WP_032237451.1;Name=WP_032237451.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AC57_RS20290;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_032237451.1;transl_table=11 NZ_JJLR01000023.1 RefSeq gene 57722 57907 . + . ID=gene-AC57_RS26590;Name=AC57_RS26590;end_range=57907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26590;old_locus_tag=AC57_0602;partial=true NZ_JJLR01000023.1 Protein Homology CDS 57722 57907 . + 0 ID=cds-WP_001397581.1;Parent=gene-AC57_RS26590;Dbxref=GenBank:WP_001397581.1;Name=WP_001397581.1;Ontology_term=GO:0006313;end_range=57907,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26590;partial=true;product=IS1 family transposase;protein_id=WP_001397581.1;transl_table=11 ##sequence-region NZ_JJLR01000024.1 1 18735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000024.1 RefSeq region 1 18735 . + . ID=NZ_JJLR01000024.1:1..18735;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000024.1 RefSeq pseudogene 1 333 . + . ID=gene-AC57_RS29610;Name=AC57_RS29610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29610;old_locus_tag=AC57_0603;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000024.1 Protein Homology CDS 1 333 . + 0 ID=cds-AC57_RS29610;Parent=gene-AC57_RS29610;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS29610;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000024.1 RefSeq pseudogene 349 1638 . + . ID=gene-AC57_RS20280;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=pseudogene;locus_tag=AC57_RS20280;old_locus_tag=AC57_0604;partial=true;pseudo=true;start_range=.,349 NZ_JJLR01000024.1 Protein Homology CDS 349 1638 . + 0 ID=cds-AC57_RS20280;Parent=gene-AC57_RS20280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=djlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AC57_RS20280;partial=true;product=J domain-containing protein;pseudo=true;start_range=.,349;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 1648 2202 . - . ID=gene-AC57_RS20275;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AC57_RS20275;old_locus_tag=AC57_0605 NZ_JJLR01000024.1 Protein Homology CDS 1648 2202 . - 0 ID=cds-WP_001035673.1;Parent=gene-AC57_RS20275;Dbxref=GenBank:WP_001035673.1;Name=WP_001035673.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AC57_RS20275;product=tetratricopeptide repeat protein;protein_id=WP_001035673.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 2304 3011 . + . ID=gene-AC57_RS20270;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AC57_RS20270;old_locus_tag=AC57_0606 NZ_JJLR01000024.1 Protein Homology CDS 2304 3011 . + 0 ID=cds-WP_001030925.1;Parent=gene-AC57_RS20270;Dbxref=GenBank:WP_001030925.1;Name=WP_001030925.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308713.1;locus_tag=AC57_RS20270;product=DUF1266 domain-containing protein;protein_id=WP_001030925.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 3008 4459 . + . ID=gene-AC57_RS20265;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AC57_RS20265;old_locus_tag=AC57_0607 NZ_JJLR01000024.1 Protein Homology CDS 3008 4459 . + 0 ID=cds-WP_032237887.1;Parent=gene-AC57_RS20265;Dbxref=GenBank:WP_032237887.1;Name=WP_032237887.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415182.1;locus_tag=AC57_RS20265;product=co-chaperone DjlC;protein_id=WP_032237887.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 4518 6188 . - . ID=gene-AC57_RS20260;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=AC57_RS20260;old_locus_tag=AC57_0608 NZ_JJLR01000024.1 Protein Homology CDS 4518 6188 . - 0 ID=cds-WP_032237886.1;Parent=gene-AC57_RS20260;Dbxref=GenBank:WP_032237886.1;Name=WP_032237886.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415183.1;locus_tag=AC57_RS20260;product=molecular chaperone HscC;protein_id=WP_032237886.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 6272 7207 . - . ID=gene-AC57_RS20255;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AC57_RS20255;old_locus_tag=AC57_0609 NZ_JJLR01000024.1 Protein Homology CDS 6272 7207 . - 0 ID=cds-WP_032237885.1;Parent=gene-AC57_RS20255;Dbxref=GenBank:WP_032237885.1;Name=WP_032237885.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308717.1;locus_tag=AC57_RS20255;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_032237885.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 7325 8050 . - . ID=gene-AC57_RS20250;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AC57_RS20250;old_locus_tag=AC57_0610 NZ_JJLR01000024.1 Protein Homology CDS 7325 8050 . - 0 ID=cds-WP_000631384.1;Parent=gene-AC57_RS20250;Dbxref=GenBank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AC57_RS20250;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 8050 8724 . - . ID=gene-AC57_RS20245;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AC57_RS20245;old_locus_tag=AC57_0611 NZ_JJLR01000024.1 Protein Homology CDS 8050 8724 . - 0 ID=cds-WP_000272824.1;Parent=gene-AC57_RS20245;Dbxref=GenBank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AC57_RS20245;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 8724 9464 . - . ID=gene-AC57_RS20240;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=AC57_RS20240;old_locus_tag=AC57_0612 NZ_JJLR01000024.1 Protein Homology CDS 8724 9464 . - 0 ID=cds-WP_000020944.1;Parent=gene-AC57_RS20240;Dbxref=GenBank:WP_000020944.1;Name=WP_000020944.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AC57_RS20240;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_000020944.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 9635 10543 . - . ID=gene-AC57_RS20235;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AC57_RS20235;old_locus_tag=AC57_0613 NZ_JJLR01000024.1 Protein Homology CDS 9635 10543 . - 0 ID=cds-WP_001177085.1;Parent=gene-AC57_RS20235;Dbxref=GenBank:WP_001177085.1;Name=WP_001177085.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=AC57_RS20235;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001177085.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 10940 12478 . - . ID=gene-AC57_RS20230;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AC57_RS20230;old_locus_tag=AC57_0614 NZ_JJLR01000024.1 Protein Homology CDS 10940 12478 . - 0 ID=cds-WP_000853024.1;Parent=gene-AC57_RS20230;Dbxref=GenBank:WP_000853024.1;Name=WP_000853024.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415190.1;locus_tag=AC57_RS20230;product=apolipoprotein N-acyltransferase;protein_id=WP_000853024.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 12503 13381 . - . ID=gene-AC57_RS20225;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AC57_RS20225;old_locus_tag=AC57_0615 NZ_JJLR01000024.1 Protein Homology CDS 12503 13381 . - 0 ID=cds-WP_001278605.1;Parent=gene-AC57_RS20225;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AC57_RS20225;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 13471 13938 . - . ID=gene-AC57_RS20220;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AC57_RS20220;old_locus_tag=AC57_0616 NZ_JJLR01000024.1 Protein Homology CDS 13471 13938 . - 0 ID=cds-WP_000084469.1;Parent=gene-AC57_RS20220;Dbxref=GenBank:WP_000084469.1;Name=WP_000084469.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AC57_RS20220;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 13935 14975 . - . ID=gene-AC57_RS20215;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AC57_RS20215;old_locus_tag=AC57_0617 NZ_JJLR01000024.1 Protein Homology CDS 13935 14975 . - 0 ID=cds-WP_001018040.1;Parent=gene-AC57_RS20215;Dbxref=GenBank:WP_001018040.1;Name=WP_001018040.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AC57_RS20215;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 15128 16552 . - . ID=gene-AC57_RS20210;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AC57_RS20210;old_locus_tag=AC57_0619 NZ_JJLR01000024.1 Protein Homology CDS 15128 16552 . - 0 ID=cds-WP_000162737.1;Parent=gene-AC57_RS20210;Dbxref=GenBank:WP_000162737.1;Name=WP_000162737.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AC57_RS20210;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162737.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 16698 17873 . + . ID=gene-AC57_RS20205;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC57_RS20205;old_locus_tag=AC57_0620 NZ_JJLR01000024.1 Protein Homology CDS 16698 17873 . + 0 ID=cds-WP_000184541.1;Parent=gene-AC57_RS20205;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC57_RS20205;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JJLR01000024.1 RefSeq gene 18027 18101 . - . ID=gene-AC57_RS20200;Name=AC57_RS20200;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20200;old_locus_tag=AC57_0621 NZ_JJLR01000024.1 tRNAscan-SE tRNA 18027 18101 . - . ID=rna-AC57_RS20200;Parent=gene-AC57_RS20200;anticodon=(pos:complement(18067..18069));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20200;product=tRNA-Gln NZ_JJLR01000024.1 tRNAscan-SE exon 18027 18101 . - . ID=exon-AC57_RS20200-1;Parent=rna-AC57_RS20200;anticodon=(pos:complement(18067..18069));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20200;product=tRNA-Gln NZ_JJLR01000024.1 RefSeq gene 18139 18213 . - . ID=gene-AC57_RS20195;Name=AC57_RS20195;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20195;old_locus_tag=AC57_0622 NZ_JJLR01000024.1 tRNAscan-SE tRNA 18139 18213 . - . ID=rna-AC57_RS20195;Parent=gene-AC57_RS20195;anticodon=(pos:complement(18179..18181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20195;product=tRNA-Gln NZ_JJLR01000024.1 tRNAscan-SE exon 18139 18213 . - . ID=exon-AC57_RS20195-1;Parent=rna-AC57_RS20195;anticodon=(pos:complement(18179..18181));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20195;product=tRNA-Gln NZ_JJLR01000024.1 RefSeq gene 18251 18325 . - . ID=gene-AC57_RS20190;Name=AC57_RS20190;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20190;old_locus_tag=AC57_0623 NZ_JJLR01000024.1 tRNAscan-SE tRNA 18251 18325 . - . ID=rna-AC57_RS20190;Parent=gene-AC57_RS20190;anticodon=(pos:complement(18291..18293));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20190;product=tRNA-Gln NZ_JJLR01000024.1 tRNAscan-SE exon 18251 18325 . - . ID=exon-AC57_RS20190-1;Parent=rna-AC57_RS20190;anticodon=(pos:complement(18291..18293));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20190;product=tRNA-Gln NZ_JJLR01000024.1 RefSeq gene 18363 18437 . - . ID=gene-AC57_RS20185;Name=AC57_RS20185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20185;old_locus_tag=AC57_0624 NZ_JJLR01000024.1 tRNAscan-SE tRNA 18363 18437 . - . ID=rna-AC57_RS20185;Parent=gene-AC57_RS20185;anticodon=(pos:complement(18403..18405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20185;product=tRNA-Gln NZ_JJLR01000024.1 tRNAscan-SE exon 18363 18437 . - . ID=exon-AC57_RS20185-1;Parent=rna-AC57_RS20185;anticodon=(pos:complement(18403..18405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20185;product=tRNA-Gln NZ_JJLR01000024.1 RefSeq gene 18475 18549 . - . ID=gene-AC57_RS20180;Name=AC57_RS20180;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20180;old_locus_tag=AC57_0625 NZ_JJLR01000024.1 tRNAscan-SE tRNA 18475 18549 . - . ID=rna-AC57_RS20180;Parent=gene-AC57_RS20180;anticodon=(pos:complement(18515..18517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20180;product=tRNA-Gln NZ_JJLR01000024.1 tRNAscan-SE exon 18475 18549 . - . ID=exon-AC57_RS20180-1;Parent=rna-AC57_RS20180;anticodon=(pos:complement(18515..18517));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20180;product=tRNA-Gln NZ_JJLR01000024.1 RefSeq gene 18597 18673 . - . ID=gene-AC57_RS20175;Name=AC57_RS20175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20175;old_locus_tag=AC57_0626 NZ_JJLR01000024.1 tRNAscan-SE tRNA 18597 18673 . - . ID=rna-AC57_RS20175;Parent=gene-AC57_RS20175;anticodon=(pos:complement(18637..18639));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20175;product=tRNA-Met NZ_JJLR01000024.1 tRNAscan-SE exon 18597 18673 . - . ID=exon-AC57_RS20175-1;Parent=rna-AC57_RS20175;anticodon=(pos:complement(18637..18639));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20175;product=tRNA-Met ##sequence-region NZ_JJLR01000025.1 1 552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000025.1 RefSeq region 1 552 . + . ID=NZ_JJLR01000025.1:1..552;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000025.1 RefSeq gene 101 177 . - . ID=gene-AC57_RS20170;Name=AC57_RS20170;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20170;old_locus_tag=AC57_0628 NZ_JJLR01000025.1 tRNAscan-SE tRNA 101 177 . - . ID=rna-AC57_RS20170;Parent=gene-AC57_RS20170;anticodon=(pos:complement(141..143));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20170;product=tRNA-Met NZ_JJLR01000025.1 tRNAscan-SE exon 101 177 . - . ID=exon-AC57_RS20170-1;Parent=rna-AC57_RS20170;anticodon=(pos:complement(141..143));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20170;product=tRNA-Met NZ_JJLR01000025.1 RefSeq gene 193 267 . - . ID=gene-AC57_RS20165;Name=AC57_RS20165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20165;old_locus_tag=AC57_0629 NZ_JJLR01000025.1 tRNAscan-SE tRNA 193 267 . - . ID=rna-AC57_RS20165;Parent=gene-AC57_RS20165;anticodon=(pos:complement(233..235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20165;product=tRNA-Gln NZ_JJLR01000025.1 tRNAscan-SE exon 193 267 . - . ID=exon-AC57_RS20165-1;Parent=rna-AC57_RS20165;anticodon=(pos:complement(233..235));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20165;product=tRNA-Gln NZ_JJLR01000025.1 RefSeq gene 291 375 . - . ID=gene-AC57_RS20160;Name=AC57_RS20160;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20160;old_locus_tag=AC57_0630 NZ_JJLR01000025.1 tRNAscan-SE tRNA 291 375 . - . ID=rna-AC57_RS20160;Parent=gene-AC57_RS20160;anticodon=(pos:complement(339..341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20160;product=tRNA-Leu NZ_JJLR01000025.1 tRNAscan-SE exon 291 375 . - . ID=exon-AC57_RS20160-1;Parent=rna-AC57_RS20160;anticodon=(pos:complement(339..341));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20160;product=tRNA-Leu NZ_JJLR01000025.1 RefSeq gene 386 462 . - . ID=gene-AC57_RS20155;Name=AC57_RS20155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20155;old_locus_tag=AC57_0631 NZ_JJLR01000025.1 tRNAscan-SE tRNA 386 462 . - . ID=rna-AC57_RS20155;Parent=gene-AC57_RS20155;anticodon=(pos:complement(426..428));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20155;product=tRNA-Met NZ_JJLR01000025.1 tRNAscan-SE exon 386 462 . - . ID=exon-AC57_RS20155-1;Parent=rna-AC57_RS20155;anticodon=(pos:complement(426..428));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20155;product=tRNA-Met NZ_JJLR01000025.1 RefSeq gene 478 552 . - . ID=gene-AC57_RS20150;Name=AC57_RS20150;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20150;old_locus_tag=AC57_0632 NZ_JJLR01000025.1 tRNAscan-SE tRNA 478 552 . - . ID=rna-AC57_RS20150;Parent=gene-AC57_RS20150;anticodon=(pos:complement(518..520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20150;product=tRNA-Gln NZ_JJLR01000025.1 tRNAscan-SE exon 478 552 . - . ID=exon-AC57_RS20150-1;Parent=rna-AC57_RS20150;anticodon=(pos:complement(518..520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20150;product=tRNA-Gln ##sequence-region NZ_JJLR01000026.1 1 864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000026.1 RefSeq region 1 864 . + . ID=NZ_JJLR01000026.1:1..864;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000026.1 RefSeq gene 95 171 . - . ID=gene-AC57_RS20145;Name=AC57_RS20145;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20145;old_locus_tag=AC57_0633 NZ_JJLR01000026.1 tRNAscan-SE tRNA 95 171 . - . ID=rna-AC57_RS20145;Parent=gene-AC57_RS20145;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20145;product=tRNA-Met NZ_JJLR01000026.1 tRNAscan-SE exon 95 171 . - . ID=exon-AC57_RS20145-1;Parent=rna-AC57_RS20145;anticodon=(pos:complement(135..137));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20145;product=tRNA-Met NZ_JJLR01000026.1 RefSeq gene 187 261 . - . ID=gene-AC57_RS20140;Name=AC57_RS20140;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20140;old_locus_tag=AC57_0634 NZ_JJLR01000026.1 tRNAscan-SE tRNA 187 261 . - . ID=rna-AC57_RS20140;Parent=gene-AC57_RS20140;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20140;product=tRNA-Gln NZ_JJLR01000026.1 tRNAscan-SE exon 187 261 . - . ID=exon-AC57_RS20140-1;Parent=rna-AC57_RS20140;anticodon=(pos:complement(227..229));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20140;product=tRNA-Gln NZ_JJLR01000026.1 RefSeq gene 296 370 . - . ID=gene-AC57_RS20135;Name=AC57_RS20135;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20135;old_locus_tag=AC57_0635 NZ_JJLR01000026.1 tRNAscan-SE tRNA 296 370 . - . ID=rna-AC57_RS20135;Parent=gene-AC57_RS20135;anticodon=(pos:complement(336..338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20135;product=tRNA-Gln NZ_JJLR01000026.1 tRNAscan-SE exon 296 370 . - . ID=exon-AC57_RS20135-1;Parent=rna-AC57_RS20135;anticodon=(pos:complement(336..338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20135;product=tRNA-Gln NZ_JJLR01000026.1 RefSeq gene 405 479 . - . ID=gene-AC57_RS20130;Name=AC57_RS20130;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20130;old_locus_tag=AC57_0636 NZ_JJLR01000026.1 tRNAscan-SE tRNA 405 479 . - . ID=rna-AC57_RS20130;Parent=gene-AC57_RS20130;anticodon=(pos:complement(445..447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20130;product=tRNA-Gln NZ_JJLR01000026.1 tRNAscan-SE exon 405 479 . - . ID=exon-AC57_RS20130-1;Parent=rna-AC57_RS20130;anticodon=(pos:complement(445..447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20130;product=tRNA-Gln NZ_JJLR01000026.1 RefSeq gene 514 588 . - . ID=gene-AC57_RS20125;Name=AC57_RS20125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20125;old_locus_tag=AC57_0637 NZ_JJLR01000026.1 tRNAscan-SE tRNA 514 588 . - . ID=rna-AC57_RS20125;Parent=gene-AC57_RS20125;anticodon=(pos:complement(554..556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20125;product=tRNA-Gln NZ_JJLR01000026.1 tRNAscan-SE exon 514 588 . - . ID=exon-AC57_RS20125-1;Parent=rna-AC57_RS20125;anticodon=(pos:complement(554..556));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20125;product=tRNA-Gln NZ_JJLR01000026.1 RefSeq gene 623 697 . - . ID=gene-AC57_RS20120;Name=AC57_RS20120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20120;old_locus_tag=AC57_0638 NZ_JJLR01000026.1 tRNAscan-SE tRNA 623 697 . - . ID=rna-AC57_RS20120;Parent=gene-AC57_RS20120;anticodon=(pos:complement(663..665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20120;product=tRNA-Gln NZ_JJLR01000026.1 tRNAscan-SE exon 623 697 . - . ID=exon-AC57_RS20120-1;Parent=rna-AC57_RS20120;anticodon=(pos:complement(663..665));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20120;product=tRNA-Gln NZ_JJLR01000026.1 RefSeq gene 721 805 . - . ID=gene-AC57_RS20115;Name=AC57_RS20115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20115;old_locus_tag=AC57_0639 NZ_JJLR01000026.1 tRNAscan-SE tRNA 721 805 . - . ID=rna-AC57_RS20115;Parent=gene-AC57_RS20115;anticodon=(pos:complement(769..771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20115;product=tRNA-Leu NZ_JJLR01000026.1 tRNAscan-SE exon 721 805 . - . ID=exon-AC57_RS20115-1;Parent=rna-AC57_RS20115;anticodon=(pos:complement(769..771));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20115;product=tRNA-Leu ##sequence-region NZ_JJLR01000027.1 1 34162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000027.1 RefSeq region 1 34162 . + . ID=NZ_JJLR01000027.1:1..34162;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000027.1 RefSeq gene 73 157 . - . ID=gene-AC57_RS20110;Name=AC57_RS20110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20110;old_locus_tag=AC57_0640 NZ_JJLR01000027.1 tRNAscan-SE tRNA 73 157 . - . ID=rna-AC57_RS20110;Parent=gene-AC57_RS20110;anticodon=(pos:complement(121..123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20110;product=tRNA-Leu NZ_JJLR01000027.1 tRNAscan-SE exon 73 157 . - . ID=exon-AC57_RS20110-1;Parent=rna-AC57_RS20110;anticodon=(pos:complement(121..123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20110;product=tRNA-Leu NZ_JJLR01000027.1 RefSeq gene 168 244 . - . ID=gene-AC57_RS20105;Name=AC57_RS20105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20105;old_locus_tag=AC57_0641 NZ_JJLR01000027.1 tRNAscan-SE tRNA 168 244 . - . ID=rna-AC57_RS20105;Parent=gene-AC57_RS20105;anticodon=(pos:complement(208..210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20105;product=tRNA-Met NZ_JJLR01000027.1 tRNAscan-SE exon 168 244 . - . ID=exon-AC57_RS20105-1;Parent=rna-AC57_RS20105;anticodon=(pos:complement(208..210));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20105;product=tRNA-Met NZ_JJLR01000027.1 RefSeq gene 260 334 . - . ID=gene-AC57_RS20100;Name=AC57_RS20100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20100;old_locus_tag=AC57_0642 NZ_JJLR01000027.1 tRNAscan-SE tRNA 260 334 . - . ID=rna-AC57_RS20100;Parent=gene-AC57_RS20100;anticodon=(pos:complement(300..302));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20100;product=tRNA-Gln NZ_JJLR01000027.1 tRNAscan-SE exon 260 334 . - . ID=exon-AC57_RS20100-1;Parent=rna-AC57_RS20100;anticodon=(pos:complement(300..302));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20100;product=tRNA-Gln NZ_JJLR01000027.1 RefSeq gene 358 442 . - . ID=gene-AC57_RS20095;Name=AC57_RS20095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20095;old_locus_tag=AC57_0643 NZ_JJLR01000027.1 tRNAscan-SE tRNA 358 442 . - . ID=rna-AC57_RS20095;Parent=gene-AC57_RS20095;anticodon=(pos:complement(406..408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20095;product=tRNA-Leu NZ_JJLR01000027.1 tRNAscan-SE exon 358 442 . - . ID=exon-AC57_RS20095-1;Parent=rna-AC57_RS20095;anticodon=(pos:complement(406..408));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20095;product=tRNA-Leu NZ_JJLR01000027.1 RefSeq gene 453 529 . - . ID=gene-AC57_RS20090;Name=AC57_RS20090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS20090;old_locus_tag=AC57_0644 NZ_JJLR01000027.1 tRNAscan-SE tRNA 453 529 . - . ID=rna-AC57_RS20090;Parent=gene-AC57_RS20090;anticodon=(pos:complement(493..495));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20090;product=tRNA-Met NZ_JJLR01000027.1 tRNAscan-SE exon 453 529 . - . ID=exon-AC57_RS20090-1;Parent=rna-AC57_RS20090;anticodon=(pos:complement(493..495));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS20090;product=tRNA-Met NZ_JJLR01000027.1 RefSeq gene 909 2573 . - . ID=gene-AC57_RS20085;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AC57_RS20085;old_locus_tag=AC57_0645 NZ_JJLR01000027.1 Protein Homology CDS 909 2573 . - 0 ID=cds-WP_000337066.1;Parent=gene-AC57_RS20085;Dbxref=GenBank:WP_000337066.1;Name=WP_000337066.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AC57_RS20085;product=asparagine synthase B;protein_id=WP_000337066.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 2970 3722 . - . ID=gene-AC57_RS20080;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AC57_RS20080;old_locus_tag=AC57_0647 NZ_JJLR01000027.1 Protein Homology CDS 2970 3722 . - 0 ID=cds-WP_000153129.1;Parent=gene-AC57_RS20080;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AC57_RS20080;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 3770 4990 . - . ID=gene-AC57_RS20075;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AC57_RS20075;old_locus_tag=AC57_0648 NZ_JJLR01000027.1 Protein Homology CDS 3770 4990 . - 0 ID=cds-WP_000187594.1;Parent=gene-AC57_RS20075;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AC57_RS20075;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 4999 6147 . - . ID=gene-AC57_RS20070;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AC57_RS20070;old_locus_tag=AC57_0649 NZ_JJLR01000027.1 Protein Homology CDS 4999 6147 . - 0 ID=cds-WP_032285643.1;Parent=gene-AC57_RS20070;Dbxref=GenBank:WP_032285643.1;Name=WP_032285643.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AC57_RS20070;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_032285643.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 6207 7007 . - . ID=gene-AC57_RS20065;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AC57_RS20065;old_locus_tag=AC57_0650 NZ_JJLR01000027.1 Protein Homology CDS 6207 7007 . - 0 ID=cds-WP_001237072.1;Parent=gene-AC57_RS20065;Dbxref=GenBank:WP_001237072.1;Name=WP_001237072.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AC57_RS20065;product=glucosamine-6-phosphate deaminase;protein_id=WP_001237072.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 7340 9286 . + . ID=gene-AC57_RS20060;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AC57_RS20060;old_locus_tag=AC57_0652 NZ_JJLR01000027.1 Protein Homology CDS 7340 9286 . + 0 ID=cds-WP_001023104.1;Parent=gene-AC57_RS20060;Dbxref=GenBank:WP_001023104.1;Name=WP_001023104.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=AC57_RS20060;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_001023104.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 9554 11218 . + . ID=gene-AC57_RS20055;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AC57_RS20055;old_locus_tag=AC57_0653 NZ_JJLR01000027.1 Protein Homology CDS 9554 11218 . + 0 ID=cds-WP_001287154.1;Parent=gene-AC57_RS20055;Dbxref=GenBank:WP_001287154.1;Name=WP_001287154.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415206.1;locus_tag=AC57_RS20055;product=glutamine--tRNA ligase;protein_id=WP_001287154.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 11380 11538 . - . ID=gene-AC57_RS30175;Name=AC57_RS30175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30175;old_locus_tag=AC57_0654 NZ_JJLR01000027.1 GeneMarkS-2+ CDS 11380 11538 . - 0 ID=cds-WP_152914850.1;Parent=gene-AC57_RS30175;Dbxref=GenBank:WP_152914850.1;Name=WP_152914850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30175;product=hypothetical protein;protein_id=WP_152914850.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 11798 13204 . + . ID=gene-AC57_RS20050;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AC57_RS20050;old_locus_tag=AC57_0655 NZ_JJLR01000027.1 Protein Homology CDS 11798 13204 . + 0 ID=cds-WP_001258839.1;Parent=gene-AC57_RS20050;Dbxref=GenBank:WP_001258839.1;Name=WP_001258839.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AC57_RS20050;product=chitoporin ChiP;protein_id=WP_001258839.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 13254 13580 . + . ID=gene-AC57_RS20045;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AC57_RS20045;old_locus_tag=AC57_0656 NZ_JJLR01000027.1 Protein Homology CDS 13254 13580 . + 0 ID=cds-WP_000733592.1;Parent=gene-AC57_RS20045;Dbxref=GenBank:WP_000733592.1;Name=WP_000733592.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308740.1;locus_tag=AC57_RS20045;product=ChiQ/YbfN family lipoprotein;protein_id=WP_000733592.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 13664 14110 . - . ID=gene-AC57_RS20040;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AC57_RS20040;old_locus_tag=AC57_0657 NZ_JJLR01000027.1 Protein Homology CDS 13664 14110 . - 0 ID=cds-WP_032285644.1;Parent=gene-AC57_RS20040;Dbxref=GenBank:WP_032285644.1;Name=WP_032285644.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AC57_RS20040;product=ferric iron uptake transcriptional regulator;protein_id=WP_032285644.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 14103 14189 . - . ID=gene-AC57_RS0123235;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AC57_RS0123235 NZ_JJLR01000027.1 Protein Homology CDS 14103 14189 . - 0 ID=cds-WP_001406816.1;Parent=gene-AC57_RS0123235;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AC57_RS0123235;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 14399 14929 . - . ID=gene-AC57_RS20035;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AC57_RS20035;old_locus_tag=AC57_0658 NZ_JJLR01000027.1 Protein Homology CDS 14399 14929 . - 0 ID=cds-WP_001018618.1;Parent=gene-AC57_RS20035;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AC57_RS20035;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 15069 15362 . - . ID=gene-AC57_RS20030;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AC57_RS20030;old_locus_tag=AC57_0659 NZ_JJLR01000027.1 Protein Homology CDS 15069 15362 . - 0 ID=cds-WP_001300829.1;Parent=gene-AC57_RS20030;Dbxref=GenBank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AC57_RS20030;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 15502 16266 . - . ID=gene-AC57_RS20025;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AC57_RS20025;old_locus_tag=AC57_0660 NZ_JJLR01000027.1 Protein Homology CDS 15502 16266 . - 0 ID=cds-WP_000773301.1;Parent=gene-AC57_RS20025;Dbxref=GenBank:WP_000773301.1;Name=WP_000773301.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706538.1;locus_tag=AC57_RS20025;product=esterase;protein_id=WP_000773301.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 16451 16996 . + . ID=gene-AC57_RS20020;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AC57_RS20020;old_locus_tag=AC57_0661 NZ_JJLR01000027.1 Protein Homology CDS 16451 16996 . + 0 ID=cds-WP_001424151.1;Parent=gene-AC57_RS20020;Dbxref=GenBank:WP_001424151.1;Name=WP_001424151.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AC57_RS20020;product=replication initiation negative regulator SeqA;protein_id=WP_001424151.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 17022 18662 . + . ID=gene-AC57_RS20015;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AC57_RS20015;old_locus_tag=AC57_0662 NZ_JJLR01000027.1 Protein Homology CDS 17022 18662 . + 0 ID=cds-WP_001297249.1;Parent=gene-AC57_RS20015;Dbxref=GenBank:WP_001297249.1;Name=WP_001297249.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=AC57_RS20015;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_001297249.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 18877 19371 . + . ID=gene-AC57_RS20010;Name=AC57_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20010;old_locus_tag=AC57_0663 NZ_JJLR01000027.1 Protein Homology CDS 18877 19371 . + 0 ID=cds-WP_000856355.1;Parent=gene-AC57_RS20010;Dbxref=GenBank:WP_000856355.1;Name=WP_000856355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415215.1;locus_tag=AC57_RS20010;product=hypothetical protein;protein_id=WP_000856355.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 19412 20062 . - . ID=gene-AC57_RS20005;Name=AC57_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS20005;old_locus_tag=AC57_0664 NZ_JJLR01000027.1 Protein Homology CDS 19412 20062 . - 0 ID=cds-WP_001208814.1;Parent=gene-AC57_RS20005;Dbxref=GenBank:WP_001208814.1;Name=WP_001208814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001208812.1;locus_tag=AC57_RS20005;product=DUF2625 domain-containing protein;protein_id=WP_001208814.1;transl_table=11 NZ_JJLR01000027.1 RefSeq pseudogene 20186 20320 . - . ID=gene-AC57_RS0123245;Name=AC57_RS0123245;end_range=20320,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123245;partial=true;pseudo=true NZ_JJLR01000027.1 Protein Homology CDS 20186 20320 . - 0 ID=cds-AC57_RS0123245;Parent=gene-AC57_RS0123245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000160,GO:0006355,GO:0003677;end_range=20320,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AC57_RS0123245;partial=true;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 20411 21730 . - . ID=gene-AC57_RS20000;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AC57_RS20000;old_locus_tag=AC57_0665 NZ_JJLR01000027.1 Protein Homology CDS 20411 21730 . - 0 ID=cds-WP_000075845.1;Parent=gene-AC57_RS20000;Dbxref=GenBank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AC57_RS20000;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 21727 23925 . - . ID=gene-AC57_RS19995;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AC57_RS19995;old_locus_tag=AC57_0666 NZ_JJLR01000027.1 Protein Homology CDS 21727 23925 . - 0 ID=cds-WP_001424153.1;Parent=gene-AC57_RS19995;Dbxref=GenBank:WP_001424153.1;Name=WP_001424153.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308748.1;locus_tag=AC57_RS19995;product=ornithine decarboxylase SpeF;protein_id=WP_001424153.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 24236 24340 . - . ID=gene-AC57_RS29620;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AC57_RS29620 NZ_JJLR01000027.1 Protein Homology CDS 24236 24340 . - 0 ID=cds-WP_001312672.1;Parent=gene-AC57_RS29620;Dbxref=GenBank:WP_001312672.1;Name=WP_001312672.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AC57_RS29620;product=leader peptide SpeFL;protein_id=WP_001312672.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 24319 24453 . - . ID=gene-AC57_RS31100;Name=AC57_RS31100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31100 NZ_JJLR01000027.1 Protein Homology CDS 24319 24453 . - 0 ID=cds-WP_001299172.1;Parent=gene-AC57_RS31100;Dbxref=GenBank:WP_001299172.1;Name=WP_001299172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001417766.1;locus_tag=AC57_RS31100;product=hypothetical protein;protein_id=WP_001299172.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 24615 25292 . - . ID=gene-AC57_RS19990;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AC57_RS19990;old_locus_tag=AC57_0667 NZ_JJLR01000027.1 Protein Homology CDS 24615 25292 . - 0 ID=cds-WP_032237698.1;Parent=gene-AC57_RS19990;Dbxref=GenBank:WP_032237698.1;Name=WP_032237698.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AC57_RS19990;product=two-component system response regulator KdpE;protein_id=WP_032237698.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 25289 27973 . - . ID=gene-AC57_RS19985;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AC57_RS19985;old_locus_tag=AC57_0668 NZ_JJLR01000027.1 Protein Homology CDS 25289 27973 . - 0 ID=cds-WP_032237699.1;Parent=gene-AC57_RS19985;Dbxref=GenBank:WP_032237699.1;Name=WP_032237699.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415223.1;locus_tag=AC57_RS19985;product=two-component system sensor histidine kinase KdpD;protein_id=WP_032237699.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 27966 28538 . - . ID=gene-AC57_RS19980;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AC57_RS19980;old_locus_tag=AC57_0669 NZ_JJLR01000027.1 Protein Homology CDS 27966 28538 . - 0 ID=cds-WP_001300431.1;Parent=gene-AC57_RS19980;Dbxref=GenBank:WP_001300431.1;Name=WP_001300431.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AC57_RS19980;product=K(+)-transporting ATPase subunit C;protein_id=WP_001300431.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 28547 30595 . - . ID=gene-AC57_RS19975;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AC57_RS19975;old_locus_tag=AC57_0670 NZ_JJLR01000027.1 Protein Homology CDS 28547 30595 . - 0 ID=cds-WP_000087939.1;Parent=gene-AC57_RS19975;Dbxref=GenBank:WP_000087939.1;Name=WP_000087939.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AC57_RS19975;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_000087939.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 30618 32291 . - . ID=gene-AC57_RS19970;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AC57_RS19970;old_locus_tag=AC57_0671 NZ_JJLR01000027.1 Protein Homology CDS 30618 32291 . - 0 ID=cds-WP_000741131.1;Parent=gene-AC57_RS19970;Dbxref=GenBank:WP_000741131.1;Name=WP_000741131.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415226.1;locus_tag=AC57_RS19970;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_000741131.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 32291 32380 . - . ID=gene-AC57_RS0123255;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AC57_RS0123255 NZ_JJLR01000027.1 Protein Homology CDS 32291 32380 . - 0 ID=cds-WP_001272653.1;Parent=gene-AC57_RS0123255;Dbxref=GenBank:WP_001272653.1;Name=WP_001272653.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AC57_RS0123255;product=K(+)-transporting ATPase subunit F;protein_id=WP_001272653.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 32693 32899 . + . ID=gene-AC57_RS19965;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AC57_RS19965;old_locus_tag=AC57_0673 NZ_JJLR01000027.1 Protein Homology CDS 32693 32899 . + 0 ID=cds-WP_000424924.1;Parent=gene-AC57_RS19965;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AC57_RS19965;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 NZ_JJLR01000027.1 RefSeq gene 33142 34162 . + . ID=gene-AC57_RS19960;Name=AC57_RS19960;end_range=34162,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19960;old_locus_tag=AC57_0674;partial=true NZ_JJLR01000027.1 Protein Homology CDS 33142 34162 . + 0 ID=cds-WP_032285645.1;Parent=gene-AC57_RS19960;Dbxref=GenBank:WP_032285645.1;Name=WP_032285645.1;end_range=34162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC57_RS19960;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_032285645.1;transl_table=11 ##sequence-region NZ_JJLR01000028.1 1 12276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000028.1 RefSeq region 1 12276 . + . ID=NZ_JJLR01000028.1:1..12276;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000028.1 RefSeq gene 1 696 . + . ID=gene-AC57_RS19955;Name=AC57_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19955;old_locus_tag=AC57_0675;partial=true;start_range=.,1 NZ_JJLR01000028.1 Protein Homology CDS 1 696 . + 0 ID=cds-WP_148725145.1;Parent=gene-AC57_RS19955;Dbxref=GenBank:WP_148725145.1;Name=WP_148725145.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS19955;partial=true;product=IS1 family transposase;protein_id=WP_148725145.1;start_range=.,1;transl_table=11 NZ_JJLR01000028.1 RefSeq pseudogene 713 973 . + . ID=gene-AC57_RS26640;Name=AC57_RS26640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26640;partial=true;pseudo=true;start_range=.,713 NZ_JJLR01000028.1 Protein Homology CDS 713 973 . + 0 ID=cds-AC57_RS26640;Parent=gene-AC57_RS26640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001390635.1;locus_tag=AC57_RS26640;partial=true;product=alpha/beta hydrolase-fold protein;pseudo=true;start_range=.,713;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 1115 2239 . - . ID=gene-AC57_RS19950;Name=AC57_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19950;old_locus_tag=AC57_0677 NZ_JJLR01000028.1 Protein Homology CDS 1115 2239 . - 0 ID=cds-WP_001231529.1;Parent=gene-AC57_RS19950;Dbxref=GenBank:WP_001231529.1;Name=WP_001231529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309397.1;locus_tag=AC57_RS19950;product=nucleotide disphospho-sugar-binding domain-containing protein;protein_id=WP_001231529.1;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 2969 3166 . - . ID=gene-AC57_RS19945;Name=AC57_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19945;old_locus_tag=AC57_0679 NZ_JJLR01000028.1 Protein Homology CDS 2969 3166 . - 0 ID=cds-WP_000958487.1;Parent=gene-AC57_RS19945;Dbxref=GenBank:WP_000958487.1;Name=WP_000958487.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502603.1;locus_tag=AC57_RS19945;product=helix-turn-helix transcriptional regulator;protein_id=WP_000958487.1;transl_table=11 NZ_JJLR01000028.1 RefSeq pseudogene 3232 3502 . - . ID=gene-AC57_RS30180;Name=AC57_RS30180;end_range=3502,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30180;old_locus_tag=AC57_0680;partial=true;pseudo=true NZ_JJLR01000028.1 Protein Homology CDS 3232 3502 . - 0 ID=cds-AC57_RS30180;Parent=gene-AC57_RS30180;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3502,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593693.1;locus_tag=AC57_RS30180;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 3812 4000 . + . ID=gene-AC57_RS30185;Name=AC57_RS30185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30185 NZ_JJLR01000028.1 GeneMarkS-2+ CDS 3812 4000 . + 0 ID=cds-WP_000180465.1;Parent=gene-AC57_RS30185;Dbxref=GenBank:WP_000180465.1;Name=WP_000180465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30185;product=hypothetical protein;protein_id=WP_000180465.1;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 4328 4522 . + . ID=gene-AC57_RS19935;Name=AC57_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19935;old_locus_tag=AC57_0684 NZ_JJLR01000028.1 Protein Homology CDS 4328 4522 . + 0 ID=cds-WP_001004881.1;Parent=gene-AC57_RS19935;Dbxref=GenBank:WP_001004881.1;Name=WP_001004881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309391.1;locus_tag=AC57_RS19935;product=hypothetical protein;protein_id=WP_001004881.1;transl_table=11 NZ_JJLR01000028.1 RefSeq pseudogene 4835 5196 . + . ID=gene-AC57_RS31175;Name=AC57_RS31175;end_range=5196,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31175;partial=true;pseudo=true;start_range=.,4835 NZ_JJLR01000028.1 Protein Homology CDS 4835 5196 . + 0 ID=cds-AC57_RS31175;Parent=gene-AC57_RS31175;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=5196,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=AC57_RS31175;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,4835;transl_table=11 NZ_JJLR01000028.1 RefSeq pseudogene 5321 5657 . - . ID=gene-AC57_RS26655;Name=AC57_RS26655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26655;pseudo=true NZ_JJLR01000028.1 Protein Homology CDS 5321 5657 . - 0 ID=cds-AC57_RS26655;Parent=gene-AC57_RS26655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502602.1;locus_tag=AC57_RS26655;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 6291 6509 . - . ID=gene-AC57_RS19925;Name=AC57_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19925;old_locus_tag=AC57_0687 NZ_JJLR01000028.1 Protein Homology CDS 6291 6509 . - 0 ID=cds-WP_000477616.1;Parent=gene-AC57_RS19925;Dbxref=GenBank:WP_000477616.1;Name=WP_000477616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309389.2;locus_tag=AC57_RS19925;product=hypothetical protein;protein_id=WP_000477616.1;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 7841 8023 . - . ID=gene-AC57_RS31105;Name=AC57_RS31105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31105 NZ_JJLR01000028.1 Protein Homology CDS 7841 8023 . - 0 ID=cds-WP_000922606.1;Parent=gene-AC57_RS31105;Dbxref=GenBank:WP_000922606.1;Name=WP_000922606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922600.1;locus_tag=AC57_RS31105;product=hypothetical protein;protein_id=WP_000922606.1;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 7962 10052 . + . ID=gene-AC57_RS19920;Name=iha;gbkey=Gene;gene=iha;gene_biotype=protein_coding;locus_tag=AC57_RS19920;old_locus_tag=AC57_0688 NZ_JJLR01000028.1 Protein Homology CDS 7962 10052 . + 0 ID=cds-WP_032180431.1;Parent=gene-AC57_RS19920;Dbxref=GenBank:WP_032180431.1;Name=WP_032180431.1;gbkey=CDS;gene=iha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309387.1;locus_tag=AC57_RS19920;product=bifunctional siderophore receptor/adhesin Iha;protein_id=WP_032180431.1;transl_table=11 NZ_JJLR01000028.1 RefSeq pseudogene 10270 10420 . - . ID=gene-AC57_RS29630;Name=AC57_RS29630;end_range=10420,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29630;partial=true;pseudo=true NZ_JJLR01000028.1 Protein Homology CDS 10270 10420 . - 0 ID=cds-AC57_RS29630;Parent=gene-AC57_RS29630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=10420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562684.1;locus_tag=AC57_RS29630;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 10748 11152 . + . ID=gene-AC57_RS19910;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS19910;old_locus_tag=AC57_0690 NZ_JJLR01000028.1 Protein Homology CDS 10748 11152 . + 0 ID=cds-WP_000839179.1;Parent=gene-AC57_RS19910;Dbxref=GenBank:WP_000839179.1;Name=WP_000839179.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AC57_RS19910;product=IS66-like element accessory protein TnpA;protein_id=WP_000839179.1;transl_table=11 NZ_JJLR01000028.1 RefSeq gene 11149 11496 . + . ID=gene-AC57_RS19905;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS19905;old_locus_tag=AC57_0691 NZ_JJLR01000028.1 Protein Homology CDS 11149 11496 . + 0 ID=cds-WP_000612626.1;Parent=gene-AC57_RS19905;Dbxref=GenBank:WP_000612626.1;Name=WP_000612626.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC57_RS19905;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612626.1;transl_table=11 NZ_JJLR01000028.1 RefSeq pseudogene 11545 11637 . + . ID=gene-AC57_RS30625;Name=AC57_RS30625;end_range=11637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30625;partial=true;pseudo=true NZ_JJLR01000028.1 Protein Homology CDS 11545 11637 . + 0 ID=cds-AC57_RS30625;Parent=gene-AC57_RS30625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC57_RS30625;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000028.1 RefSeq pseudogene 11741 12276 . + . ID=gene-AC57_RS19900;Name=AC57_RS19900;end_range=12276,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS19900;old_locus_tag=AC57_0693;partial=true;pseudo=true NZ_JJLR01000028.1 Protein Homology CDS 11741 12276 . + 0 ID=cds-AC57_RS19900;Parent=gene-AC57_RS19900;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=12276,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS19900;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000029.1 1 730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000029.1 RefSeq region 1 730 . + . ID=NZ_JJLR01000029.1:1..730;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000029.1 RefSeq pseudogene 1 730 . + . ID=gene-AC57_RS19895;Name=AC57_RS19895;end_range=730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS19895;old_locus_tag=AC57_0694;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000029.1 Protein Homology CDS 1 730 . + 2 ID=cds-AC57_RS19895;Parent=gene-AC57_RS19895;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=730,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312891.1;locus_tag=AC57_RS19895;partial=true;product=RHS repeat domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000030.1 1 2486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000030.1 RefSeq region 1 2486 . + . ID=NZ_JJLR01000030.1:1..2486;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000030.1 RefSeq pseudogene 1 2120 . + . ID=gene-AC57_RS29635;Name=AC57_RS29635;end_range=2120,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29635;old_locus_tag=AC57_0695;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000030.1 Protein Homology CDS 1 2120 . + 2 ID=cds-AC57_RS29635;Parent=gene-AC57_RS29635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AC57_RS29635;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000030.1 RefSeq gene 2326 2486 . + . ID=gene-AC57_RS26680;Name=AC57_RS26680;end_range=2486,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26680;old_locus_tag=AC57_0696;partial=true NZ_JJLR01000030.1 Protein Homology CDS 2326 2486 . + 0 ID=cds-WP_001392608.1;Parent=gene-AC57_RS26680;Dbxref=GenBank:WP_001392608.1;Name=WP_001392608.1;Ontology_term=GO:0006313;end_range=2486,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26680;partial=true;product=IS1 family transposase;protein_id=WP_001392608.1;transl_table=11 ##sequence-region NZ_JJLR01000031.1 1 485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000031.1 RefSeq region 1 485 . + . ID=NZ_JJLR01000031.1:1..485;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000031.1 RefSeq pseudogene 1 224 . + . ID=gene-AC57_RS19885;Name=AC57_RS19885;end_range=224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS19885;old_locus_tag=AC57_0697;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000031.1 Protein Homology CDS 1 224 . + 2 ID=cds-AC57_RS19885;Parent=gene-AC57_RS19885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=224,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC57_RS19885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000031.1 RefSeq pseudogene 279 485 . + . ID=gene-AC57_RS19880;Name=AC57_RS19880;end_range=485,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS19880;old_locus_tag=AC57_0698;partial=true;pseudo=true NZ_JJLR01000031.1 Protein Homology CDS 279 485 . + 0 ID=cds-AC57_RS19880;Parent=gene-AC57_RS19880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=485,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS19880;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000032.1 1 2806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000032.1 RefSeq region 1 2806 . + . ID=NZ_JJLR01000032.1:1..2806;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000032.1 RefSeq gene 1 1183 . + . ID=gene-AC57_RS26685;Name=AC57_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26685;old_locus_tag=AC57_0699;partial=true;start_range=.,1 NZ_JJLR01000032.1 Protein Homology CDS 1 1183 . + 1 ID=cds-WP_148725146.1;Parent=gene-AC57_RS26685;Dbxref=GenBank:WP_148725146.1;Name=WP_148725146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310088.2;locus_tag=AC57_RS26685;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_148725146.1;start_range=.,1;transl_table=11 NZ_JJLR01000032.1 RefSeq gene 1195 1380 . + . ID=gene-AC57_RS31110;Name=AC57_RS31110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31110 NZ_JJLR01000032.1 Protein Homology CDS 1195 1380 . + 0 ID=cds-WP_032238000.1;Parent=gene-AC57_RS31110;Dbxref=GenBank:WP_032238000.1;Name=WP_032238000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000759878.1;locus_tag=AC57_RS31110;product=hypothetical protein;protein_id=WP_032238000.1;transl_table=11 NZ_JJLR01000032.1 RefSeq gene 1380 1589 . + . ID=gene-AC57_RS31115;Name=AC57_RS31115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31115;old_locus_tag=AC57_0700 NZ_JJLR01000032.1 Protein Homology CDS 1380 1589 . + 0 ID=cds-WP_032279790.1;Parent=gene-AC57_RS31115;Dbxref=GenBank:WP_032279790.1;Name=WP_032279790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001702891.1;locus_tag=AC57_RS31115;product=hypothetical protein;protein_id=WP_032279790.1;transl_table=11 NZ_JJLR01000032.1 RefSeq pseudogene 1611 1709 . - . ID=gene-AC57_RS26690;Name=AC57_RS26690;end_range=1709,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26690;partial=true;pseudo=true NZ_JJLR01000032.1 Protein Homology CDS 1611 1709 . - 0 ID=cds-AC57_RS26690;Parent=gene-AC57_RS26690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1709,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AC57_RS26690;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000032.1 RefSeq gene 2037 2806 . + . ID=gene-AC57_RS19870;Name=AC57_RS19870;end_range=2806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19870;old_locus_tag=AC57_0701;partial=true NZ_JJLR01000032.1 Protein Homology CDS 2037 2806 . + 0 ID=cds-WP_032285650.1;Parent=gene-AC57_RS19870;Dbxref=GenBank:WP_032285650.1;Name=WP_032285650.1;Ontology_term=GO:0006313,GO:0004803;end_range=2806,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS19870;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032285650.1;transl_table=11 ##sequence-region NZ_JJLR01000033.1 1 2617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000033.1 RefSeq region 1 2617 . + . ID=NZ_JJLR01000033.1:1..2617;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000033.1 RefSeq gene 1 896 . + . ID=gene-AC57_RS19865;Name=AC57_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19865;old_locus_tag=AC57_0702;partial=true;start_range=.,1 NZ_JJLR01000033.1 Protein Homology CDS 1 896 . + 2 ID=cds-WP_032285652.1;Parent=gene-AC57_RS19865;Dbxref=GenBank:WP_032285652.1;Name=WP_032285652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026224.1;locus_tag=AC57_RS19865;partial=true;product=DUF4329 domain-containing protein;protein_id=WP_032285652.1;start_range=.,1;transl_table=11 NZ_JJLR01000033.1 RefSeq gene 986 1252 . + . ID=gene-AC57_RS0123305;Name=AC57_RS0123305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123305 NZ_JJLR01000033.1 Protein Homology CDS 986 1252 . + 0 ID=cds-WP_001233785.1;Parent=gene-AC57_RS0123305;Dbxref=GenBank:WP_001233785.1;Name=WP_001233785.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026967.6;locus_tag=AC57_RS0123305;product=YbbC/YhhH family protein;protein_id=WP_001233785.1;transl_table=11 NZ_JJLR01000033.1 RefSeq pseudogene 1357 1707 . + . ID=gene-AC57_RS0123310;Name=AC57_RS0123310;end_range=1707,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123310;partial=true;pseudo=true NZ_JJLR01000033.1 Protein Homology CDS 1357 1707 . + 0 ID=cds-AC57_RS0123310;Parent=gene-AC57_RS0123310;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AC57_RS0123310;partial=true;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000033.1 RefSeq gene 1848 2617 . + . ID=gene-AC57_RS19860;Name=AC57_RS19860;end_range=2617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19860;old_locus_tag=AC57_0703;partial=true NZ_JJLR01000033.1 Protein Homology CDS 1848 2617 . + 0 ID=cds-WP_032285653.1;Parent=gene-AC57_RS19860;Dbxref=GenBank:WP_032285653.1;Name=WP_032285653.1;Ontology_term=GO:0006313,GO:0004803;end_range=2617,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS19860;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032285653.1;transl_table=11 ##sequence-region NZ_JJLR01000034.1 1 62315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000034.1 RefSeq region 1 62315 . + . ID=NZ_JJLR01000034.1:1..62315;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000034.1 RefSeq gene 1 261 . + . ID=gene-AC57_RS19855;Name=AC57_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19855;old_locus_tag=AC57_0704;partial=true;start_range=.,1 NZ_JJLR01000034.1 Protein Homology CDS 1 261 . + 0 ID=cds-WP_000317683.1-2;Parent=gene-AC57_RS19855;Dbxref=GenBank:WP_000317683.1;Name=WP_000317683.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS19855;partial=true;product=IS1 family transposase;protein_id=WP_000317683.1;start_range=.,1;transl_table=11 NZ_JJLR01000034.1 RefSeq pseudogene 240 332 . + . ID=gene-AC57_RS31180;Name=AC57_RS31180;end_range=332,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31180;partial=true;pseudo=true;start_range=.,240 NZ_JJLR01000034.1 Protein Homology CDS 240 332 . + 0 ID=cds-AC57_RS31180;Parent=gene-AC57_RS31180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=332,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS31180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,240;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 483 992 . + . ID=gene-AC57_RS19850;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=AC57_RS19850;old_locus_tag=AC57_0705 NZ_JJLR01000034.1 Protein Homology CDS 483 992 . + 0 ID=cds-WP_001053305.1;Parent=gene-AC57_RS19850;Dbxref=GenBank:WP_001053305.1;Name=WP_001053305.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AC57_RS19850;product=YbgA family protein;protein_id=WP_001053305.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 989 2407 . + . ID=gene-AC57_RS19845;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AC57_RS19845;old_locus_tag=AC57_0706 NZ_JJLR01000034.1 Protein Homology CDS 989 2407 . + 0 ID=cds-WP_023281127.1;Parent=gene-AC57_RS19845;Dbxref=GenBank:WP_023281127.1;Name=WP_023281127.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415236.1;locus_tag=AC57_RS19845;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_023281127.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 2557 4038 . - . ID=gene-AC57_RS19840;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AC57_RS19840;old_locus_tag=AC57_0707 NZ_JJLR01000034.1 Protein Homology CDS 2557 4038 . - 0 ID=cds-WP_001032689.1;Parent=gene-AC57_RS19840;Dbxref=GenBank:WP_001032689.1;Name=WP_001032689.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415237.1;locus_tag=AC57_RS19840;product=dipeptide permease DtpD;protein_id=WP_001032689.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 4309 5052 . + . ID=gene-AC57_RS19835;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AC57_RS19835;old_locus_tag=AC57_0708 NZ_JJLR01000034.1 Protein Homology CDS 4309 5052 . + 0 ID=cds-WP_000798871.1;Parent=gene-AC57_RS19835;Dbxref=GenBank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AC57_RS19835;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 5075 5731 . + . ID=gene-AC57_RS19830;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AC57_RS19830;old_locus_tag=AC57_0709 NZ_JJLR01000034.1 Protein Homology CDS 5075 5731 . + 0 ID=cds-WP_001188343.1;Parent=gene-AC57_RS19830;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AC57_RS19830;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 5725 6657 . + . ID=gene-AC57_RS19825;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AC57_RS19825;old_locus_tag=AC57_0710 NZ_JJLR01000034.1 Protein Homology CDS 5725 6657 . + 0 ID=cds-WP_000912724.1;Parent=gene-AC57_RS19825;Dbxref=GenBank:WP_000912724.1;Name=WP_000912724.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415240.1;locus_tag=AC57_RS19825;product=5-oxoprolinase subunit PxpC;protein_id=WP_000912724.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 6647 7381 . + . ID=gene-AC57_RS19820;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AC57_RS19820;old_locus_tag=AC57_0711 NZ_JJLR01000034.1 Protein Homology CDS 6647 7381 . + 0 ID=cds-WP_032279783.1;Parent=gene-AC57_RS19820;Dbxref=GenBank:WP_032279783.1;Name=WP_032279783.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415241.1;locus_tag=AC57_RS19820;product=5-oxoprolinase subunit PxpA;protein_id=WP_032279783.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 7417 8208 . + . ID=gene-AC57_RS19815;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AC57_RS19815;old_locus_tag=AC57_0712 NZ_JJLR01000034.1 Protein Homology CDS 7417 8208 . + 0 ID=cds-WP_032279784.1;Parent=gene-AC57_RS19815;Dbxref=GenBank:WP_032279784.1;Name=WP_032279784.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415242.1;locus_tag=AC57_RS19815;product=endonuclease VIII;protein_id=WP_032279784.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 8205 9251 . - . ID=gene-AC57_RS19810;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=AC57_RS19810;old_locus_tag=AC57_0713 NZ_JJLR01000034.1 Protein Homology CDS 8205 9251 . - 0 ID=cds-WP_001336221.1;Parent=gene-AC57_RS19810;Dbxref=GenBank:WP_001336221.1;Name=WP_001336221.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=abrB;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AC57_RS19810;product=AbrB family transcriptional regulator;protein_id=WP_001336221.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 9403 10464 . - . ID=gene-AC57_RS19805;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=AC57_RS19805;old_locus_tag=AC57_0714 NZ_JJLR01000034.1 Protein Homology CDS 9403 10464 . - 0 ID=cds-WP_001272410.1;Parent=gene-AC57_RS19805;Dbxref=GenBank:WP_001272410.1;Name=WP_001272410.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgO;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415244.4;locus_tag=AC57_RS19805;product=fimbrial protein;protein_id=WP_001272410.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 10461 11189 . - . ID=gene-AC57_RS19800;Name=ybgP;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=AC57_RS19800;old_locus_tag=AC57_0715 NZ_JJLR01000034.1 Protein Homology CDS 10461 11189 . - 0 ID=cds-WP_032237421.1;Parent=gene-AC57_RS19800;Dbxref=GenBank:WP_032237421.1;Name=WP_032237421.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=ybgP;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415245.1;locus_tag=AC57_RS19800;product=fimbrial biogenesis chaperone;protein_id=WP_032237421.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 11204 13660 . - . ID=gene-AC57_RS19795;Name=ybgQ;gbkey=Gene;gene=ybgQ;gene_biotype=protein_coding;locus_tag=AC57_RS19795;old_locus_tag=AC57_0716 NZ_JJLR01000034.1 Protein Homology CDS 11204 13660 . - 0 ID=cds-WP_187439610.1;Parent=gene-AC57_RS19795;Dbxref=GenBank:WP_187439610.1;Name=WP_187439610.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;gene=ybgQ;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AC57_RS19795;product=fimbria/pilus outer membrane usher protein;protein_id=WP_187439610.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 13711 14277 . - . ID=gene-AC57_RS19790;Name=ybgD;gbkey=Gene;gene=ybgD;gene_biotype=protein_coding;locus_tag=AC57_RS19790;old_locus_tag=AC57_0717 NZ_JJLR01000034.1 Protein Homology CDS 13711 14277 . - 0 ID=cds-WP_000472412.1;Parent=gene-AC57_RS19790;Dbxref=GenBank:WP_000472412.1;Name=WP_000472412.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415247.1;locus_tag=AC57_RS19790;product=fimbrial protein;protein_id=WP_000472412.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 14667 15950 . - . ID=gene-AC57_RS19785;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AC57_RS19785;old_locus_tag=AC57_0718 NZ_JJLR01000034.1 Protein Homology CDS 14667 15950 . - 0 ID=cds-WP_000785834.1;Parent=gene-AC57_RS19785;Dbxref=GenBank:WP_000785834.1;Name=WP_000785834.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=AC57_RS19785;product=citrate synthase;protein_id=WP_000785834.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 16156 16263 . - . ID=gene-AC57_RS29640;Name=AC57_RS29640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29640 NZ_JJLR01000034.1 Protein Homology CDS 16156 16263 . - 0 ID=cds-WP_001305582.1;Parent=gene-AC57_RS29640;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AC57_RS29640;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 16644 17048 . + . ID=gene-AC57_RS0123320;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AC57_RS0123320;old_locus_tag=AC57_0719 NZ_JJLR01000034.1 Protein Homology CDS 16644 17048 . + 0 ID=cds-WP_000263347.1;Parent=gene-AC57_RS0123320;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AC57_RS0123320;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 17042 17389 . + . ID=gene-AC57_RS19780;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AC57_RS19780;old_locus_tag=AC57_0720 NZ_JJLR01000034.1 Protein Homology CDS 17042 17389 . + 0 ID=cds-WP_000254365.1;Parent=gene-AC57_RS19780;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AC57_RS19780;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 17389 19155 . + . ID=gene-AC57_RS19775;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AC57_RS19775;old_locus_tag=AC57_0721 NZ_JJLR01000034.1 Protein Homology CDS 17389 19155 . + 0 ID=cds-WP_000775540.1;Parent=gene-AC57_RS19775;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AC57_RS19775;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 19171 19887 . + . ID=gene-AC57_RS19770;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AC57_RS19770;old_locus_tag=AC57_0722 NZ_JJLR01000034.1 Protein Homology CDS 19171 19887 . + 0 ID=cds-WP_001235254.1;Parent=gene-AC57_RS19770;Dbxref=GenBank:WP_001235254.1;Name=WP_001235254.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AC57_RS19770;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235254.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 20188 22989 . + . ID=gene-AC57_RS19765;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AC57_RS19765;old_locus_tag=AC57_0724 NZ_JJLR01000034.1 Protein Homology CDS 20188 22989 . + 0 ID=cds-WP_001181473.1;Parent=gene-AC57_RS19765;Dbxref=GenBank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AC57_RS19765;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 23004 24221 . + . ID=gene-AC57_RS19760;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AC57_RS19760;old_locus_tag=AC57_0725 NZ_JJLR01000034.1 Protein Homology CDS 23004 24221 . + 0 ID=cds-WP_032279786.1;Parent=gene-AC57_RS19760;Dbxref=GenBank:WP_032279786.1;Name=WP_032279786.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AC57_RS19760;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_032279786.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 24587 25753 . + . ID=gene-AC57_RS19755;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AC57_RS19755;old_locus_tag=AC57_0726 NZ_JJLR01000034.1 Protein Homology CDS 24587 25753 . + 0 ID=cds-WP_032279787.1;Parent=gene-AC57_RS19755;Dbxref=GenBank:WP_032279787.1;Name=WP_032279787.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AC57_RS19755;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_032279787.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 25753 26622 . + . ID=gene-AC57_RS19750;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AC57_RS19750;old_locus_tag=AC57_0727 NZ_JJLR01000034.1 Protein Homology CDS 25753 26622 . + 0 ID=cds-WP_000025458.1;Parent=gene-AC57_RS19750;Dbxref=GenBank:WP_000025458.1;Name=WP_000025458.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AC57_RS19750;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 26726 27448 . - . ID=gene-AC57_RS19745;Name=mngR;gbkey=Gene;gene=mngR;gene_biotype=protein_coding;locus_tag=AC57_RS19745;old_locus_tag=AC57_0728 NZ_JJLR01000034.1 Protein Homology CDS 26726 27448 . - 0 ID=cds-WP_000509902.1;Parent=gene-AC57_RS19745;Dbxref=GenBank:WP_000509902.1;Name=WP_000509902.1;gbkey=CDS;gene=mngR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415258.1;locus_tag=AC57_RS19745;product=mannosyl-D-glycerate transport/metabolism system transcriptional repressor MngR;protein_id=WP_000509902.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 27617 29533 . + . ID=gene-AC57_RS19740;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=AC57_RS19740;old_locus_tag=AC57_0729 NZ_JJLR01000034.1 Protein Homology CDS 27617 29533 . + 0 ID=cds-WP_001054864.1;Parent=gene-AC57_RS19740;Dbxref=GenBank:WP_001054864.1;Name=WP_001054864.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001393949.1;locus_tag=AC57_RS19740;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_001054864.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 29551 32184 . + . ID=gene-AC57_RS19735;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=AC57_RS19735;old_locus_tag=AC57_0730 NZ_JJLR01000034.1 Protein Homology CDS 29551 32184 . + 0 ID=cds-WP_032237424.1;Parent=gene-AC57_RS19735;Dbxref=GenBank:WP_032237424.1;Name=WP_032237424.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415260.1;locus_tag=AC57_RS19735;product=mannosylglycerate hydrolase;protein_id=WP_032237424.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 33031 34599 . + . ID=gene-AC57_RS19725;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AC57_RS19725;old_locus_tag=AC57_0732 NZ_JJLR01000034.1 Protein Homology CDS 33031 34599 . + 0 ID=cds-WP_000884361.1;Parent=gene-AC57_RS19725;Dbxref=GenBank:WP_000884361.1;Name=WP_000884361.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AC57_RS19725;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 34615 35754 . + . ID=gene-AC57_RS19720;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AC57_RS19720;old_locus_tag=AC57_0733 NZ_JJLR01000034.1 Protein Homology CDS 34615 35754 . + 0 ID=cds-WP_032237425.1;Parent=gene-AC57_RS19720;Dbxref=GenBank:WP_032237425.1;Name=WP_032237425.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AC57_RS19720;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_032237425.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 35769 35882 . + . ID=gene-AC57_RS19715;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AC57_RS19715;old_locus_tag=AC57_0734 NZ_JJLR01000034.1 Protein Homology CDS 35769 35882 . + 0 ID=cds-WP_000270282.1;Parent=gene-AC57_RS19715;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AC57_RS19715;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 35882 36175 . + . ID=gene-AC57_RS19710;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AC57_RS19710;old_locus_tag=AC57_0735 NZ_JJLR01000034.1 Protein Homology CDS 35882 36175 . + 0 ID=cds-WP_000034602.1;Parent=gene-AC57_RS19710;Dbxref=GenBank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AC57_RS19710;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 36325 36729 . + . ID=gene-AC57_RS19705;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AC57_RS19705;old_locus_tag=AC57_0736 NZ_JJLR01000034.1 Protein Homology CDS 36325 36729 . + 0 ID=cds-WP_001098384.1;Parent=gene-AC57_RS19705;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AC57_RS19705;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 36726 37418 . + . ID=gene-AC57_RS19700;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AC57_RS19700;old_locus_tag=AC57_0737 NZ_JJLR01000034.1 Protein Homology CDS 36726 37418 . + 0 ID=cds-WP_000131314.1;Parent=gene-AC57_RS19700;Dbxref=GenBank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AC57_RS19700;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 37422 37850 . + . ID=gene-AC57_RS19695;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AC57_RS19695;old_locus_tag=AC57_0738 NZ_JJLR01000034.1 Protein Homology CDS 37422 37850 . + 0 ID=cds-WP_000090097.1;Parent=gene-AC57_RS19695;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AC57_RS19695;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 37915 39180 . + . ID=gene-AC57_RS19690;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AC57_RS19690;old_locus_tag=AC57_0739 NZ_JJLR01000034.1 Protein Homology CDS 37915 39180 . + 0 ID=cds-WP_000030637.1;Parent=gene-AC57_RS19690;Dbxref=GenBank:WP_000030637.1;Name=WP_000030637.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AC57_RS19690;product=cell envelope integrity protein TolA;protein_id=WP_000030637.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 39313 40605 . + . ID=gene-AC57_RS19685;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AC57_RS19685;old_locus_tag=AC57_0740 NZ_JJLR01000034.1 Protein Homology CDS 39313 40605 . + 0 ID=cds-WP_001295307.1;Parent=gene-AC57_RS19685;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AC57_RS19685;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 40640 41161 . + . ID=gene-AC57_RS19680;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AC57_RS19680;old_locus_tag=AC57_0741 NZ_JJLR01000034.1 Protein Homology CDS 40640 41161 . + 0 ID=cds-WP_001295306.1;Parent=gene-AC57_RS19680;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AC57_RS19680;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 41171 41962 . + . ID=gene-AC57_RS19675;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AC57_RS19675;old_locus_tag=AC57_0742 NZ_JJLR01000034.1 Protein Homology CDS 41171 41962 . + 0 ID=cds-WP_000097580.1;Parent=gene-AC57_RS19675;Dbxref=GenBank:WP_000097580.1;Name=WP_000097580.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AC57_RS19675;product=cell division protein CpoB;protein_id=WP_000097580.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 42127 42202 . + . ID=gene-AC57_RS19670;Name=AC57_RS19670;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19670;old_locus_tag=AC57_0743 NZ_JJLR01000034.1 tRNAscan-SE tRNA 42127 42202 . + . ID=rna-AC57_RS19670;Parent=gene-AC57_RS19670;anticodon=(pos:42160..42162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19670;product=tRNA-Lys NZ_JJLR01000034.1 tRNAscan-SE exon 42127 42202 . + . ID=exon-AC57_RS19670-1;Parent=rna-AC57_RS19670;anticodon=(pos:42160..42162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19670;product=tRNA-Lys NZ_JJLR01000034.1 RefSeq gene 42338 42413 . + . ID=gene-AC57_RS19665;Name=AC57_RS19665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19665;old_locus_tag=AC57_0744 NZ_JJLR01000034.1 tRNAscan-SE tRNA 42338 42413 . + . ID=rna-AC57_RS19665;Parent=gene-AC57_RS19665;anticodon=(pos:42371..42373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19665;product=tRNA-Val NZ_JJLR01000034.1 tRNAscan-SE exon 42338 42413 . + . ID=exon-AC57_RS19665-1;Parent=rna-AC57_RS19665;anticodon=(pos:42371..42373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19665;product=tRNA-Val NZ_JJLR01000034.1 RefSeq gene 42417 42492 . + . ID=gene-AC57_RS19660;Name=AC57_RS19660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19660;old_locus_tag=AC57_0745 NZ_JJLR01000034.1 tRNAscan-SE tRNA 42417 42492 . + . ID=rna-AC57_RS19660;Parent=gene-AC57_RS19660;anticodon=(pos:42450..42452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19660;product=tRNA-Lys NZ_JJLR01000034.1 tRNAscan-SE exon 42417 42492 . + . ID=exon-AC57_RS19660-1;Parent=rna-AC57_RS19660;anticodon=(pos:42450..42452);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19660;product=tRNA-Lys NZ_JJLR01000034.1 RefSeq gene 42544 42619 . + . ID=gene-AC57_RS19655;Name=AC57_RS19655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19655;old_locus_tag=AC57_0746 NZ_JJLR01000034.1 tRNAscan-SE tRNA 42544 42619 . + . ID=rna-AC57_RS19655;Parent=gene-AC57_RS19655;anticodon=(pos:42577..42579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19655;product=tRNA-Val NZ_JJLR01000034.1 tRNAscan-SE exon 42544 42619 . + . ID=exon-AC57_RS19655-1;Parent=rna-AC57_RS19655;anticodon=(pos:42577..42579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19655;product=tRNA-Val NZ_JJLR01000034.1 RefSeq gene 42623 42698 . + . ID=gene-AC57_RS19650;Name=AC57_RS19650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19650;old_locus_tag=AC57_0747 NZ_JJLR01000034.1 tRNAscan-SE tRNA 42623 42698 . + . ID=rna-AC57_RS19650;Parent=gene-AC57_RS19650;anticodon=(pos:42656..42658);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19650;product=tRNA-Lys NZ_JJLR01000034.1 tRNAscan-SE exon 42623 42698 . + . ID=exon-AC57_RS19650-1;Parent=rna-AC57_RS19650;anticodon=(pos:42656..42658);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19650;product=tRNA-Lys NZ_JJLR01000034.1 RefSeq gene 42845 42920 . + . ID=gene-AC57_RS19645;Name=AC57_RS19645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19645;old_locus_tag=AC57_0748 NZ_JJLR01000034.1 tRNAscan-SE tRNA 42845 42920 . + . ID=rna-AC57_RS19645;Parent=gene-AC57_RS19645;anticodon=(pos:42878..42880);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19645;product=tRNA-Lys NZ_JJLR01000034.1 tRNAscan-SE exon 42845 42920 . + . ID=exon-AC57_RS19645-1;Parent=rna-AC57_RS19645;anticodon=(pos:42878..42880);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19645;product=tRNA-Lys NZ_JJLR01000034.1 RefSeq gene 43067 43142 . + . ID=gene-AC57_RS19640;Name=AC57_RS19640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19640;old_locus_tag=AC57_0749 NZ_JJLR01000034.1 tRNAscan-SE tRNA 43067 43142 . + . ID=rna-AC57_RS19640;Parent=gene-AC57_RS19640;anticodon=(pos:43100..43102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19640;product=tRNA-Lys NZ_JJLR01000034.1 tRNAscan-SE exon 43067 43142 . + . ID=exon-AC57_RS19640-1;Parent=rna-AC57_RS19640;anticodon=(pos:43100..43102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19640;product=tRNA-Lys NZ_JJLR01000034.1 RefSeq gene 43275 43350 . + . ID=gene-AC57_RS19635;Name=AC57_RS19635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19635;old_locus_tag=AC57_0750 NZ_JJLR01000034.1 tRNAscan-SE tRNA 43275 43350 . + . ID=rna-AC57_RS19635;Parent=gene-AC57_RS19635;anticodon=(pos:43308..43310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19635;product=tRNA-Lys NZ_JJLR01000034.1 tRNAscan-SE exon 43275 43350 . + . ID=exon-AC57_RS19635-1;Parent=rna-AC57_RS19635;anticodon=(pos:43308..43310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19635;product=tRNA-Lys NZ_JJLR01000034.1 RefSeq gene 43483 43558 . + . ID=gene-AC57_RS19630;Name=AC57_RS19630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS19630;old_locus_tag=AC57_0751 NZ_JJLR01000034.1 tRNAscan-SE tRNA 43483 43558 . + . ID=rna-AC57_RS19630;Parent=gene-AC57_RS19630;anticodon=(pos:43516..43518);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19630;product=tRNA-Lys NZ_JJLR01000034.1 tRNAscan-SE exon 43483 43558 . + . ID=exon-AC57_RS19630-1;Parent=rna-AC57_RS19630;anticodon=(pos:43516..43518);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS19630;product=tRNA-Lys NZ_JJLR01000034.1 RefSeq gene 43836 44879 . + . ID=gene-AC57_RS19625;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AC57_RS19625;old_locus_tag=AC57_0753 NZ_JJLR01000034.1 Protein Homology CDS 43836 44879 . + 0 ID=cds-WP_000115290.1;Parent=gene-AC57_RS19625;Dbxref=GenBank:WP_000115290.1;Name=WP_000115290.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AC57_RS19625;product=quinolinate synthase NadA;protein_id=WP_000115290.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 44917 45636 . + . ID=gene-AC57_RS19620;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AC57_RS19620;old_locus_tag=AC57_0754 NZ_JJLR01000034.1 Protein Homology CDS 44917 45636 . + 0 ID=cds-WP_032237427.1;Parent=gene-AC57_RS19620;Dbxref=GenBank:WP_032237427.1;Name=WP_032237427.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415272.1;locus_tag=AC57_RS19620;product=nicotinamide riboside transporter PnuC;protein_id=WP_032237427.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 45633 46574 . - . ID=gene-AC57_RS19615;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AC57_RS19615;old_locus_tag=AC57_0755 NZ_JJLR01000034.1 Protein Homology CDS 45633 46574 . - 0 ID=cds-WP_000951292.1;Parent=gene-AC57_RS19615;Dbxref=GenBank:WP_000951292.1;Name=WP_000951292.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AC57_RS19615;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 46688 47068 . - . ID=gene-AC57_RS19610;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AC57_RS19610;old_locus_tag=AC57_0756 NZ_JJLR01000034.1 Protein Homology CDS 46688 47068 . - 0 ID=cds-WP_000784351.1;Parent=gene-AC57_RS19610;Dbxref=GenBank:WP_000784351.1;Name=WP_000784351.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415274.1;locus_tag=AC57_RS19610;product=YbgS-like family protein;protein_id=WP_000784351.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 47384 48436 . + . ID=gene-AC57_RS19605;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AC57_RS19605;old_locus_tag=AC57_0757 NZ_JJLR01000034.1 Protein Homology CDS 47384 48436 . + 0 ID=cds-WP_001109196.1;Parent=gene-AC57_RS19605;Dbxref=GenBank:WP_001109196.1;Name=WP_001109196.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AC57_RS19605;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_001109196.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 48594 49346 . - . ID=gene-AC57_RS19600;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AC57_RS19600;old_locus_tag=AC57_0758 NZ_JJLR01000034.1 Protein Homology CDS 48594 49346 . - 0 ID=cds-WP_001295305.1;Parent=gene-AC57_RS19600;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AC57_RS19600;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 49548 50588 . - . ID=gene-AC57_RS19595;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AC57_RS19595;old_locus_tag=AC57_0760 NZ_JJLR01000034.1 Protein Homology CDS 49548 50588 . - 0 ID=cds-WP_032237428.1;Parent=gene-AC57_RS19595;Dbxref=GenBank:WP_032237428.1;Name=WP_032237428.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AC57_RS19595;product=galactose-1-epimerase;protein_id=WP_032237428.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 50582 51730 . - . ID=gene-AC57_RS19590;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AC57_RS19590;old_locus_tag=AC57_0761 NZ_JJLR01000034.1 Protein Homology CDS 50582 51730 . - 0 ID=cds-WP_001427167.1;Parent=gene-AC57_RS19590;Dbxref=GenBank:WP_001427167.1;Name=WP_001427167.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AC57_RS19590;product=galactokinase;protein_id=WP_001427167.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 51734 52780 . - . ID=gene-AC57_RS19585;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AC57_RS19585;old_locus_tag=AC57_0762 NZ_JJLR01000034.1 Protein Homology CDS 51734 52780 . - 0 ID=cds-WP_000191497.1;Parent=gene-AC57_RS19585;Dbxref=GenBank:WP_000191497.1;Name=WP_000191497.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415279.1;locus_tag=AC57_RS19585;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_000191497.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 52790 53806 . - . ID=gene-AC57_RS19580;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AC57_RS19580;old_locus_tag=AC57_0763 NZ_JJLR01000034.1 Protein Homology CDS 52790 53806 . - 0 ID=cds-WP_001265438.1;Parent=gene-AC57_RS19580;Dbxref=GenBank:WP_001265438.1;Name=WP_001265438.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415280.3;locus_tag=AC57_RS19580;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265438.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 54067 55539 . - . ID=gene-AC57_RS19575;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AC57_RS19575;old_locus_tag=AC57_0764 NZ_JJLR01000034.1 Protein Homology CDS 54067 55539 . - 0 ID=cds-WP_032237429.1;Parent=gene-AC57_RS19575;Dbxref=GenBank:WP_032237429.1;Name=WP_032237429.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AC57_RS19575;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_032237429.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 55607 56395 . - . ID=gene-AC57_RS19570;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AC57_RS19570;old_locus_tag=AC57_0765 NZ_JJLR01000034.1 Protein Homology CDS 55607 56395 . - 0 ID=cds-WP_001147439.1;Parent=gene-AC57_RS19570;Dbxref=GenBank:WP_001147439.1;Name=WP_001147439.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AC57_RS19570;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 56524 56673 . + . ID=gene-AC57_RS19565;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AC57_RS19565;old_locus_tag=AC57_0766 NZ_JJLR01000034.1 Protein Homology CDS 56524 56673 . + 0 ID=cds-WP_000891515.1;Parent=gene-AC57_RS19565;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AC57_RS19565;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 56840 57613 . + . ID=gene-AC57_RS19560;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AC57_RS19560;old_locus_tag=AC57_0767 NZ_JJLR01000034.1 Protein Homology CDS 56840 57613 . + 0 ID=cds-WP_000101984.1;Parent=gene-AC57_RS19560;Dbxref=GenBank:WP_000101984.1;Name=WP_000101984.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415284.1;locus_tag=AC57_RS19560;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101984.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 57613 58302 . + . ID=gene-AC57_RS19555;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AC57_RS19555;old_locus_tag=AC57_0768 NZ_JJLR01000034.1 Protein Homology CDS 57613 58302 . + 0 ID=cds-WP_000604034.1;Parent=gene-AC57_RS19555;Dbxref=GenBank:WP_000604034.1;Name=WP_000604034.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AC57_RS19555;product=molybdate ABC transporter permease subunit;protein_id=WP_000604034.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 58305 59363 . + . ID=gene-AC57_RS19550;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AC57_RS19550;old_locus_tag=AC57_0769 NZ_JJLR01000034.1 Protein Homology CDS 58305 59363 . + 0 ID=cds-WP_000891692.1;Parent=gene-AC57_RS19550;Dbxref=GenBank:WP_000891692.1;Name=WP_000891692.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415286.1;locus_tag=AC57_RS19550;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891692.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 59364 60182 . - . ID=gene-AC57_RS19545;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AC57_RS19545;old_locus_tag=AC57_0770 NZ_JJLR01000034.1 Protein Homology CDS 59364 60182 . - 0 ID=cds-WP_001300666.1;Parent=gene-AC57_RS19545;Dbxref=GenBank:WP_001300666.1;Name=WP_001300666.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415287.1;locus_tag=AC57_RS19545;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_001300666.1;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 60337 61332 . + . ID=gene-AC57_RS19540;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AC57_RS19540;old_locus_tag=AC57_0771 NZ_JJLR01000034.1 Protein Homology CDS 60337 61332 . + 0 ID=cds-WP_000815435.1;Parent=gene-AC57_RS19540;Dbxref=GenBank:WP_000815435.1;Name=WP_000815435.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=AC57_RS19540;product=6-phosphogluconolactonase;protein_id=WP_000815435.1;transl_table=11 NZ_JJLR01000034.1 RefSeq pseudogene 61373 62029 . - . ID=gene-AC57_RS0123340;Name=AC57_RS0123340;end_range=62029,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123340;partial=true;pseudo=true NZ_JJLR01000034.1 Protein Homology CDS 61373 62029 . - 0 ID=cds-AC57_RS0123340;Parent=gene-AC57_RS0123340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=62029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415289.4;locus_tag=AC57_RS0123340;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000034.1 RefSeq gene 62036 62315 . - . ID=gene-AC57_RS26710;Name=AC57_RS26710;end_range=62315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26710;old_locus_tag=AC57_0773;partial=true NZ_JJLR01000034.1 Protein Homology CDS 62036 62315 . - 1 ID=cds-WP_005129930.1-2;Parent=gene-AC57_RS26710;Dbxref=GenBank:WP_005129930.1;Name=WP_005129930.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=62315,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26710;partial=true;product=IS1 family transposase;protein_id=WP_005129930.1;transl_table=11 ##sequence-region NZ_JJLR01000035.1 1 5813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000035.1 RefSeq region 1 5813 . + . ID=NZ_JJLR01000035.1:1..5813;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000035.1 RefSeq gene 1 269 . - . ID=gene-AC57_RS19535;Name=AC57_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19535;old_locus_tag=AC57_0774;partial=true;start_range=.,1 NZ_JJLR01000035.1 Protein Homology CDS 1 269 . - 0 ID=cds-WP_001483704.1-2;Parent=gene-AC57_RS19535;Dbxref=GenBank:WP_001483704.1;Name=WP_001483704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS19535;partial=true;product=IS1-like element transposase;protein_id=WP_001483704.1;start_range=.,1;transl_table=11 NZ_JJLR01000035.1 RefSeq gene 302 2467 . + . ID=gene-AC57_RS19530;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=protein_coding;locus_tag=AC57_RS19530;old_locus_tag=AC57_0775 NZ_JJLR01000035.1 Protein Homology CDS 302 2467 . + 0 ID=cds-WP_071999860.1;Parent=gene-AC57_RS19530;Dbxref=GenBank:WP_071999860.1;Name=WP_071999860.1;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000741440.1;locus_tag=AC57_RS19530;product=hydratase;protein_id=WP_071999860.1;transl_table=11 NZ_JJLR01000035.1 RefSeq gene 2701 3984 . - . ID=gene-AC57_RS19525;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AC57_RS19525;old_locus_tag=AC57_0776 NZ_JJLR01000035.1 Protein Homology CDS 2701 3984 . - 0 ID=cds-WP_001091569.1;Parent=gene-AC57_RS19525;Dbxref=GenBank:WP_001091569.1;Name=WP_001091569.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415293.1;locus_tag=AC57_RS19525;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091569.1;transl_table=11 NZ_JJLR01000035.1 RefSeq gene 4119 5189 . - . ID=gene-AC57_RS19520;Name=AC57_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19520;old_locus_tag=AC57_0777 NZ_JJLR01000035.1 Protein Homology CDS 4119 5189 . - 0 ID=cds-WP_032237980.1;Parent=gene-AC57_RS19520;Dbxref=GenBank:WP_032237980.1;Name=WP_032237980.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533644.1;locus_tag=AC57_RS19520;product=tyrosine-type recombinase/integrase;protein_id=WP_032237980.1;transl_table=11 NZ_JJLR01000035.1 RefSeq gene 5167 5385 . - . ID=gene-AC57_RS0123360;Name=AC57_RS0123360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123360 NZ_JJLR01000035.1 Protein Homology CDS 5167 5385 . - 0 ID=cds-WP_001303849.1;Parent=gene-AC57_RS0123360;Dbxref=GenBank:WP_001303849.1;Name=WP_001303849.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001325331.1;locus_tag=AC57_RS0123360;product=excisionase;protein_id=WP_001303849.1;transl_table=11 NZ_JJLR01000035.1 RefSeq gene 5546 5813 . + . ID=gene-AC57_RS19515;Name=AC57_RS19515;end_range=5813,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19515;old_locus_tag=AC57_0778;partial=true NZ_JJLR01000035.1 Protein Homology CDS 5546 5813 . + 0 ID=cds-WP_001483704.1-3;Parent=gene-AC57_RS19515;Dbxref=GenBank:WP_001483704.1;Name=WP_001483704.1;end_range=5813,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS19515;partial=true;product=IS1-like element transposase;protein_id=WP_001483704.1;transl_table=11 ##sequence-region NZ_JJLR01000036.1 1 37033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000036.1 RefSeq region 1 37033 . + . ID=NZ_JJLR01000036.1:1..37033;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000036.1 RefSeq gene 1 2163 . + . ID=gene-AC57_RS30635;Name=AC57_RS30635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30635;old_locus_tag=AC57_0780;partial=true;start_range=.,1 NZ_JJLR01000036.1 Protein Homology CDS 1 2163 . + 0 ID=cds-WP_077756415.1;Parent=gene-AC57_RS30635;Dbxref=GenBank:WP_077756415.1;Name=WP_077756415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001569831.1;locus_tag=AC57_RS30635;partial=true;product=phage tail protein;protein_id=WP_077756415.1;start_range=.,1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 2163 2747 . + . ID=gene-AC57_RS19505;Name=AC57_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19505;old_locus_tag=AC57_0781 NZ_JJLR01000036.1 Protein Homology CDS 2163 2747 . + 0 ID=cds-WP_032236975.1;Parent=gene-AC57_RS19505;Dbxref=GenBank:WP_032236975.1;Name=WP_032236975.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AC57_RS19505;product=tail fiber assembly protein;protein_id=WP_032236975.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 2821 4152 . - . ID=gene-AC57_RS19500;Name=AC57_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS19500;old_locus_tag=AC57_0782 NZ_JJLR01000036.1 Protein Homology CDS 2821 4152 . - 0 ID=cds-WP_032236976.1;Parent=gene-AC57_RS19500;Dbxref=GenBank:WP_032236976.1;Name=WP_032236976.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586336.1;locus_tag=AC57_RS19500;product=sensor domain-containing diguanylate cyclase;protein_id=WP_032236976.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 4898 5374 . - . ID=gene-AC57_RS19495;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AC57_RS19495;old_locus_tag=AC57_0783 NZ_JJLR01000036.1 Protein Homology CDS 4898 5374 . - 0 ID=cds-WP_000767389.1;Parent=gene-AC57_RS19495;Dbxref=GenBank:WP_000767389.1;Name=WP_000767389.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415294.1;locus_tag=AC57_RS19495;product=kinase inhibitor;protein_id=WP_000767389.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 5433 6722 . - . ID=gene-AC57_RS19490;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AC57_RS19490;old_locus_tag=AC57_0784 NZ_JJLR01000036.1 Protein Homology CDS 5433 6722 . - 0 ID=cds-WP_071999861.1;Parent=gene-AC57_RS19490;Dbxref=GenBank:WP_071999861.1;Name=WP_071999861.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415295.1;locus_tag=AC57_RS19490;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_071999861.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 6809 7849 . + . ID=gene-AC57_RS19485;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AC57_RS19485;old_locus_tag=AC57_0785 NZ_JJLR01000036.1 Protein Homology CDS 6809 7849 . + 0 ID=cds-WP_000951213.1;Parent=gene-AC57_RS19485;Dbxref=GenBank:WP_000951213.1;Name=WP_000951213.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AC57_RS19485;product=biotin synthase BioB;protein_id=WP_000951213.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 7846 9000 . + . ID=gene-AC57_RS19480;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AC57_RS19480;old_locus_tag=AC57_0786 NZ_JJLR01000036.1 Protein Homology CDS 7846 9000 . + 0 ID=cds-WP_000118826.1;Parent=gene-AC57_RS19480;Dbxref=GenBank:WP_000118826.1;Name=WP_000118826.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415297.1;locus_tag=AC57_RS19480;product=8-amino-7-oxononanoate synthase;protein_id=WP_000118826.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 8987 9742 . + . ID=gene-AC57_RS19475;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AC57_RS19475;old_locus_tag=AC57_0787 NZ_JJLR01000036.1 Protein Homology CDS 8987 9742 . + 0 ID=cds-WP_000246761.1;Parent=gene-AC57_RS19475;Dbxref=GenBank:WP_000246761.1;Name=WP_000246761.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415298.1;locus_tag=AC57_RS19475;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_000246761.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 9735 10412 . + . ID=gene-AC57_RS19470;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AC57_RS19470;old_locus_tag=AC57_0788 NZ_JJLR01000036.1 Protein Homology CDS 9735 10412 . + 0 ID=cds-WP_000044843.1;Parent=gene-AC57_RS19470;Dbxref=GenBank:WP_000044843.1;Name=WP_000044843.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415299.1;locus_tag=AC57_RS19470;product=dethiobiotin synthase;protein_id=WP_000044843.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 10991 13012 . + . ID=gene-AC57_RS19465;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AC57_RS19465;old_locus_tag=AC57_0789 NZ_JJLR01000036.1 Protein Homology CDS 10991 13012 . + 0 ID=cds-WP_000042533.1;Parent=gene-AC57_RS19465;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AC57_RS19465;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 13204 14112 . - . ID=gene-AC57_RS19460;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AC57_RS19460;old_locus_tag=AC57_0790 NZ_JJLR01000036.1 Protein Homology CDS 13204 14112 . - 0 ID=cds-WP_001295302.1;Parent=gene-AC57_RS19460;Dbxref=GenBank:WP_001295302.1;Name=WP_001295302.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415301.1;locus_tag=AC57_RS19460;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_001295302.1;transl_table=11 NZ_JJLR01000036.1 cmsearch riboswitch 14377 14521 . + . ID=id-NZ_JJLR01000036.1:14377..14521;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLR01000036.1 RefSeq gene 14509 15498 . + . ID=gene-AC57_RS19455;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AC57_RS19455;old_locus_tag=AC57_0791 NZ_JJLR01000036.1 Protein Homology CDS 14509 15498 . + 0 ID=cds-WP_001340186.1;Parent=gene-AC57_RS19455;Dbxref=GenBank:WP_001340186.1;Name=WP_001340186.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AC57_RS19455;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001340186.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 15520 16032 . + . ID=gene-AC57_RS19450;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AC57_RS19450;old_locus_tag=AC57_0792 NZ_JJLR01000036.1 Protein Homology CDS 15520 16032 . + 0 ID=cds-WP_000084639.1;Parent=gene-AC57_RS19450;Dbxref=GenBank:WP_000084639.1;Name=WP_000084639.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AC57_RS19450;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 16035 16520 . + . ID=gene-AC57_RS19445;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AC57_RS19445;old_locus_tag=AC57_0793 NZ_JJLR01000036.1 Protein Homology CDS 16035 16520 . + 0 ID=cds-WP_000080885.1;Parent=gene-AC57_RS19445;Dbxref=GenBank:WP_000080885.1;Name=WP_000080885.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AC57_RS19445;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 16513 16758 . + . ID=gene-AC57_RS19440;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AC57_RS19440;old_locus_tag=AC57_0794 NZ_JJLR01000036.1 Protein Homology CDS 16513 16758 . + 0 ID=cds-WP_000598619.1;Parent=gene-AC57_RS19440;Dbxref=GenBank:WP_000598619.1;Name=WP_000598619.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415305.1;locus_tag=AC57_RS19440;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598619.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 16760 17212 . + . ID=gene-AC57_RS19435;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AC57_RS19435;old_locus_tag=AC57_0795 NZ_JJLR01000036.1 Protein Homology CDS 16760 17212 . + 0 ID=cds-WP_000852296.1;Parent=gene-AC57_RS19435;Dbxref=GenBank:WP_000852296.1;Name=WP_000852296.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AC57_RS19435;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852296.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 17349 18053 . + . ID=gene-AC57_RS19430;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AC57_RS19430;old_locus_tag=AC57_0796 NZ_JJLR01000036.1 Protein Homology CDS 17349 18053 . + 0 ID=cds-WP_032236978.1;Parent=gene-AC57_RS19430;Dbxref=GenBank:WP_032236978.1;Name=WP_032236978.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AC57_RS19430;product=Bax inhibitor-1/YccA family protein;protein_id=WP_032236978.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 18258 18971 . + . ID=gene-AC57_RS19425;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AC57_RS19425;old_locus_tag=AC57_0797 NZ_JJLR01000036.1 Protein Homology CDS 18258 18971 . + 0 ID=cds-WP_000446917.1;Parent=gene-AC57_RS19425;Dbxref=GenBank:WP_000446917.1;Name=WP_000446917.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706665.2;locus_tag=AC57_RS19425;product=Bax inhibitor-1/YccA family protein;protein_id=WP_000446917.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 19007 19963 . - . ID=gene-AC57_RS19420;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AC57_RS19420;old_locus_tag=AC57_0798 NZ_JJLR01000036.1 Protein Homology CDS 19007 19963 . - 0 ID=cds-WP_000045450.1;Parent=gene-AC57_RS19420;Dbxref=GenBank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AC57_RS19420;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045450.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 19963 21204 . - . ID=gene-AC57_RS19415;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AC57_RS19415;old_locus_tag=AC57_0799 NZ_JJLR01000036.1 Protein Homology CDS 19963 21204 . - 0 ID=cds-WP_032236979.1;Parent=gene-AC57_RS19415;Dbxref=GenBank:WP_032236979.1;Name=WP_032236979.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AC57_RS19415;product=cardiolipin synthase ClsB;protein_id=WP_032236979.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 21201 21962 . - . ID=gene-AC57_RS19410;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AC57_RS19410;old_locus_tag=AC57_0800 NZ_JJLR01000036.1 Protein Homology CDS 21201 21962 . - 0 ID=cds-WP_001113348.1;Parent=gene-AC57_RS19410;Dbxref=GenBank:WP_001113348.1;Name=WP_001113348.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AC57_RS19410;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113348.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 22095 22505 . + . ID=gene-AC57_RS19405;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AC57_RS19405;old_locus_tag=AC57_0801 NZ_JJLR01000036.1 Protein Homology CDS 22095 22505 . + 0 ID=cds-WP_000871982.1;Parent=gene-AC57_RS19405;Dbxref=GenBank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AC57_RS19405;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 22467 23573 . - . ID=gene-AC57_RS19400;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AC57_RS19400;old_locus_tag=AC57_0802 NZ_JJLR01000036.1 Protein Homology CDS 22467 23573 . - 0 ID=cds-WP_000469031.1;Parent=gene-AC57_RS19400;Dbxref=GenBank:WP_000469031.1;Name=WP_000469031.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AC57_RS19400;product=ABC transporter permease;protein_id=WP_000469031.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 23584 24717 . - . ID=gene-AC57_RS19395;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AC57_RS19395;old_locus_tag=AC57_0803 NZ_JJLR01000036.1 Protein Homology CDS 23584 24717 . - 0 ID=cds-WP_000070131.1;Parent=gene-AC57_RS19395;Dbxref=GenBank:WP_000070131.1;Name=WP_000070131.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AC57_RS19395;product=ABC transporter permease;protein_id=WP_000070131.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 24710 26446 . - . ID=gene-AC57_RS19390;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AC57_RS19390;old_locus_tag=AC57_0804 NZ_JJLR01000036.1 Protein Homology CDS 24710 26446 . - 0 ID=cds-WP_000996107.1;Parent=gene-AC57_RS19390;Dbxref=GenBank:WP_000996107.1;Name=WP_000996107.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415315.4;locus_tag=AC57_RS19390;product=ATP-binding cassette domain-containing protein;protein_id=WP_000996107.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 26439 27434 . - . ID=gene-AC57_RS19385;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AC57_RS19385;old_locus_tag=AC57_0805 NZ_JJLR01000036.1 Protein Homology CDS 26439 27434 . - 0 ID=cds-WP_000743444.1;Parent=gene-AC57_RS19385;Dbxref=GenBank:WP_000743444.1;Name=WP_000743444.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AC57_RS19385;product=secretion protein HlyD;protein_id=WP_000743444.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 27437 28108 . - . ID=gene-AC57_RS19380;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AC57_RS19380;old_locus_tag=AC57_0806 NZ_JJLR01000036.1 Protein Homology CDS 27437 28108 . - 0 ID=cds-WP_001296991.1;Parent=gene-AC57_RS19380;Dbxref=GenBank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AC57_RS19380;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 28337 29701 . + . ID=gene-AC57_RS19375;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AC57_RS19375;old_locus_tag=AC57_0807 NZ_JJLR01000036.1 Protein Homology CDS 28337 29701 . + 0 ID=cds-WP_000007101.1;Parent=gene-AC57_RS19375;Dbxref=GenBank:WP_000007101.1;Name=WP_000007101.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AC57_RS19375;product=ATP-dependent RNA helicase RhlE;protein_id=WP_000007101.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 29933 30415 . - . ID=gene-AC57_RS19370;Name=ybiA;gbkey=Gene;gene=ybiA;gene_biotype=protein_coding;locus_tag=AC57_RS19370;old_locus_tag=AC57_0808 NZ_JJLR01000036.1 Protein Homology CDS 29933 30415 . - 0 ID=cds-WP_001145127.1;Parent=gene-AC57_RS19370;Dbxref=GenBank:WP_001145127.1;Name=WP_001145127.1;gbkey=CDS;gene=ybiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415319.1;locus_tag=AC57_RS19370;product=N-glycosidase YbiA;protein_id=WP_001145127.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 30535 32685 . + . ID=gene-AC57_RS19365;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AC57_RS19365;old_locus_tag=AC57_0809 NZ_JJLR01000036.1 Protein Homology CDS 30535 32685 . + 0 ID=cds-WP_032237000.1;Parent=gene-AC57_RS19365;Dbxref=GenBank:WP_032237000.1;Name=WP_032237000.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415320.1;locus_tag=AC57_RS19365;product=ATP-dependent DNA helicase DinG;protein_id=WP_032237000.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 32713 33675 . + . ID=gene-AC57_RS19360;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AC57_RS19360;old_locus_tag=AC57_0810 NZ_JJLR01000036.1 Protein Homology CDS 32713 33675 . + 0 ID=cds-WP_000386551.1;Parent=gene-AC57_RS19360;Dbxref=GenBank:WP_000386551.1;Name=WP_000386551.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AC57_RS19360;product=DNA-binding protein YbiB;protein_id=WP_000386551.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 33816 34901 . + . ID=gene-AC57_RS19355;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AC57_RS19355;old_locus_tag=AC57_0811 NZ_JJLR01000036.1 Protein Homology CDS 33816 34901 . + 0 ID=cds-WP_000443530.1;Parent=gene-AC57_RS19355;Dbxref=GenBank:WP_000443530.1;Name=WP_000443530.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415322.1;locus_tag=AC57_RS19355;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443530.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 34968 35027 . + . ID=gene-AC57_RS30480;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AC57_RS30480 NZ_JJLR01000036.1 Protein Homology CDS 34968 35027 . + 0 ID=cds-WP_211180490.1;Parent=gene-AC57_RS30480;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AC57_RS30480;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 35130 35390 . - . ID=gene-AC57_RS19350;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AC57_RS19350;old_locus_tag=AC57_0812 NZ_JJLR01000036.1 Protein Homology CDS 35130 35390 . - 0 ID=cds-WP_000849301.1;Parent=gene-AC57_RS19350;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AC57_RS19350;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 35655 35921 . - . ID=gene-AC57_RS19345;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AC57_RS19345;old_locus_tag=AC57_0813 NZ_JJLR01000036.1 Protein Homology CDS 35655 35921 . - 0 ID=cds-WP_000146343.1;Parent=gene-AC57_RS19345;Dbxref=GenBank:WP_000146343.1;Name=WP_000146343.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415324.1;locus_tag=AC57_RS19345;product=C4-type zinc finger protein YbiI;protein_id=WP_000146343.1;transl_table=11 NZ_JJLR01000036.1 RefSeq gene 35995 36672 . - . ID=gene-AC57_RS19340;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AC57_RS19340;old_locus_tag=AC57_0814 NZ_JJLR01000036.1 Protein Homology CDS 35995 36672 . - 0 ID=cds-WP_032236981.1;Parent=gene-AC57_RS19340;Dbxref=GenBank:WP_032236981.1;Name=WP_032236981.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AC57_RS19340;product=PKHD-type hydroxylase YbiX;protein_id=WP_032236981.1;transl_table=11 NZ_JJLR01000036.1 RefSeq pseudogene 36874 37033 . - . ID=gene-AC57_RS0123380;Name=AC57_RS0123380;end_range=37033,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123380;partial=true;pseudo=true NZ_JJLR01000036.1 Protein Homology CDS 36874 37033 . - 1 ID=cds-AC57_RS0123380;Parent=gene-AC57_RS0123380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=37033,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0123380;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000037.1 1 77698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000037.1 RefSeq region 1 77698 . + . ID=NZ_JJLR01000037.1:1..77698;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000037.1 RefSeq pseudogene 1 536 . - . ID=gene-AC57_RS19335;Name=AC57_RS19335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS19335;old_locus_tag=AC57_0815;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000037.1 Protein Homology CDS 1 536 . - 0 ID=cds-AC57_RS19335;Parent=gene-AC57_RS19335;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS19335;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 613 2895 . - . ID=gene-AC57_RS19330;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=AC57_RS19330;old_locus_tag=AC57_0816 NZ_JJLR01000037.1 Protein Homology CDS 613 2895 . - 0 ID=cds-WP_000430057.1;Parent=gene-AC57_RS19330;Dbxref=GenBank:WP_000430057.1;Name=WP_000430057.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=AC57_RS19330;product=catecholate siderophore receptor Fiu;protein_id=WP_000430057.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 3160 3420 . - . ID=gene-AC57_RS29655;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AC57_RS29655;old_locus_tag=AC57_0817 NZ_JJLR01000037.1 Protein Homology CDS 3160 3420 . - 0 ID=cds-WP_000710619.1;Parent=gene-AC57_RS29655;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AC57_RS29655;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 3696 4622 . + . ID=gene-AC57_RS19320;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AC57_RS19320;old_locus_tag=AC57_0818 NZ_JJLR01000037.1 Protein Homology CDS 3696 4622 . + 0 ID=cds-WP_001295299.1;Parent=gene-AC57_RS19320;Dbxref=GenBank:WP_001295299.1;Name=WP_001295299.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AC57_RS19320;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_001295299.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 4619 6844 . - . ID=gene-AC57_RS19315;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AC57_RS19315;old_locus_tag=AC57_0819 NZ_JJLR01000037.1 Protein Homology CDS 4619 6844 . - 0 ID=cds-WP_032236982.1;Parent=gene-AC57_RS19315;Dbxref=GenBank:WP_032236982.1;Name=WP_032236982.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AC57_RS19315;product=mechanosensitive channel protein;protein_id=WP_032236982.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 7105 7827 . - . ID=gene-AC57_RS19310;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AC57_RS19310;old_locus_tag=AC57_0820 NZ_JJLR01000037.1 Protein Homology CDS 7105 7827 . - 0 ID=cds-WP_000569083.1;Parent=gene-AC57_RS19310;Dbxref=GenBank:WP_000569083.1;Name=WP_000569083.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AC57_RS19310;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569083.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 7824 8483 . - . ID=gene-AC57_RS19305;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AC57_RS19305;old_locus_tag=AC57_0821 NZ_JJLR01000037.1 Protein Homology CDS 7824 8483 . - 0 ID=cds-WP_001159065.1;Parent=gene-AC57_RS19305;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AC57_RS19305;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 8622 9368 . - . ID=gene-AC57_RS19300;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AC57_RS19300;old_locus_tag=AC57_0822 NZ_JJLR01000037.1 Protein Homology CDS 8622 9368 . - 0 ID=cds-WP_000843866.1;Parent=gene-AC57_RS19300;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AC57_RS19300;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 9772 10275 . - . ID=gene-AC57_RS19295;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AC57_RS19295;old_locus_tag=AC57_0823 NZ_JJLR01000037.1 Protein Homology CDS 9772 10275 . - 0 ID=cds-WP_000100800.1;Parent=gene-AC57_RS19295;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AC57_RS19295;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 10574 11461 . - . ID=gene-AC57_RS19290;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AC57_RS19290;old_locus_tag=AC57_0824 NZ_JJLR01000037.1 Protein Homology CDS 10574 11461 . - 0 ID=cds-WP_032236984.1;Parent=gene-AC57_RS19290;Dbxref=GenBank:WP_032236984.1;Name=WP_032236984.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AC57_RS19290;product=threonine/homoserine exporter RhtA;protein_id=WP_032236984.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 11696 11761 . + . ID=gene-AC57_RS29660;Name=AC57_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29660 NZ_JJLR01000037.1 Protein Homology CDS 11696 11761 . + 0 ID=cds-WP_120795379.1;Parent=gene-AC57_RS29660;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AC57_RS29660;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 11814 12329 . + . ID=gene-AC57_RS19285;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AC57_RS19285;old_locus_tag=AC57_0825 NZ_JJLR01000037.1 Protein Homology CDS 11814 12329 . + 0 ID=cds-WP_001295296.1;Parent=gene-AC57_RS19285;Dbxref=GenBank:WP_001295296.1;Name=WP_001295296.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AC57_RS19285;product=outer membrane protein OmpX;protein_id=WP_001295296.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 12378 13961 . - . ID=gene-AC57_RS19280;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AC57_RS19280;old_locus_tag=AC57_0826 NZ_JJLR01000037.1 Protein Homology CDS 12378 13961 . - 0 ID=cds-WP_001054678.1;Parent=gene-AC57_RS19280;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AC57_RS19280;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 14233 14361 . - . ID=gene-AC57_RS19275;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AC57_RS19275;old_locus_tag=AC57_0827 NZ_JJLR01000037.1 Protein Homology CDS 14233 14361 . - 0 ID=cds-WP_001001761.1;Parent=gene-AC57_RS19275;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AC57_RS19275;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 14547 15014 . + . ID=gene-AC57_RS19270;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AC57_RS19270;old_locus_tag=AC57_0828 NZ_JJLR01000037.1 Protein Homology CDS 14547 15014 . + 0 ID=cds-WP_000091016.1;Parent=gene-AC57_RS19270;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AC57_RS19270;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 15011 16129 . + . ID=gene-AC57_RS19265;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AC57_RS19265;old_locus_tag=AC57_0829 NZ_JJLR01000037.1 Protein Homology CDS 15011 16129 . + 0 ID=cds-WP_000056442.1;Parent=gene-AC57_RS19265;Dbxref=GenBank:WP_000056442.1;Name=WP_000056442.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415339.1;locus_tag=AC57_RS19265;product=anion transporter;protein_id=WP_000056442.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 16188 17108 . - . ID=gene-AC57_RS19260;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AC57_RS19260;old_locus_tag=AC57_0830 NZ_JJLR01000037.1 Protein Homology CDS 16188 17108 . - 0 ID=cds-WP_001056384.1;Parent=gene-AC57_RS19260;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AC57_RS19260;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 17327 18919 . + . ID=gene-AC57_RS19255;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AC57_RS19255;old_locus_tag=AC57_0831 NZ_JJLR01000037.1 Protein Homology CDS 17327 18919 . + 0 ID=cds-WP_000961458.1;Parent=gene-AC57_RS19255;Dbxref=GenBank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AC57_RS19255;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 19160 20425 . - . ID=gene-AC57_RS19250;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AC57_RS19250;old_locus_tag=AC57_0832 NZ_JJLR01000037.1 Protein Homology CDS 19160 20425 . - 0 ID=cds-WP_000168797.1;Parent=gene-AC57_RS19250;Dbxref=GenBank:WP_000168797.1;Name=WP_000168797.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415342.1;locus_tag=AC57_RS19250;product=DUF1479 domain-containing protein;protein_id=WP_000168797.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 20577 21392 . - . ID=gene-AC57_RS19245;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AC57_RS19245;old_locus_tag=AC57_0833 NZ_JJLR01000037.1 Protein Homology CDS 20577 21392 . - 0 ID=cds-WP_000114276.1;Parent=gene-AC57_RS19245;Dbxref=GenBank:WP_000114276.1;Name=WP_000114276.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415343.1;locus_tag=AC57_RS19245;product=sugar-phosphatase YbiV;protein_id=WP_000114276.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 21538 23970 . - . ID=gene-AC57_RS19240;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AC57_RS19240;old_locus_tag=AC57_0834 NZ_JJLR01000037.1 Protein Homology CDS 21538 23970 . - 0 ID=cds-WP_000209343.1;Parent=gene-AC57_RS19240;Dbxref=GenBank:WP_000209343.1;Name=WP_000209343.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AC57_RS19240;product=glycyl radical protein;protein_id=WP_000209343.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 23976 24875 . - . ID=gene-AC57_RS19235;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AC57_RS19235;old_locus_tag=AC57_0835 NZ_JJLR01000037.1 Protein Homology CDS 23976 24875 . - 0 ID=cds-WP_032236985.1;Parent=gene-AC57_RS19235;Dbxref=GenBank:WP_032236985.1;Name=WP_032236985.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AC57_RS19235;product=glycyl-radical enzyme activating protein;protein_id=WP_032236985.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 25006 25668 . + . ID=gene-AC57_RS19230;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AC57_RS19230;old_locus_tag=AC57_0836 NZ_JJLR01000037.1 Protein Homology CDS 25006 25668 . + 0 ID=cds-WP_001336208.1;Parent=gene-AC57_RS19230;Dbxref=GenBank:WP_001336208.1;Name=WP_001336208.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AC57_RS19230;product=fructose-6-phosphate aldolase;protein_id=WP_001336208.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 25744 26493 . - . ID=gene-AC57_RS19225;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AC57_RS19225;old_locus_tag=AC57_0837 NZ_JJLR01000037.1 Protein Homology CDS 25744 26493 . - 0 ID=cds-WP_000829217.1;Parent=gene-AC57_RS19225;Dbxref=GenBank:WP_000829217.1;Name=WP_000829217.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415347.1;locus_tag=AC57_RS19225;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_000829217.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 26493 27728 . - . ID=gene-AC57_RS19220;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AC57_RS19220;old_locus_tag=AC57_0838 NZ_JJLR01000037.1 Protein Homology CDS 26493 27728 . - 0 ID=cds-WP_000397340.1;Parent=gene-AC57_RS19220;Dbxref=GenBank:WP_000397340.1;Name=WP_000397340.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415348.1;locus_tag=AC57_RS19220;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397340.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 27932 28897 . + . ID=gene-AC57_RS19215;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AC57_RS19215;old_locus_tag=AC57_0839 NZ_JJLR01000037.1 Protein Homology CDS 27932 28897 . + 0 ID=cds-WP_000513775.1;Parent=gene-AC57_RS19215;Dbxref=GenBank:WP_000513775.1;Name=WP_000513775.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415349.1;locus_tag=AC57_RS19215;product=beta-aspartyl-peptidase;protein_id=WP_000513775.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 28884 30755 . + . ID=gene-AC57_RS19210;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AC57_RS19210;old_locus_tag=AC57_0840 NZ_JJLR01000037.1 Protein Homology CDS 28884 30755 . + 0 ID=cds-WP_032236986.1;Parent=gene-AC57_RS19210;Dbxref=GenBank:WP_032236986.1;Name=WP_032236986.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415350.2;locus_tag=AC57_RS19210;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_032236986.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 30775 32313 . + . ID=gene-AC57_RS19205;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AC57_RS19205;old_locus_tag=AC57_0841 NZ_JJLR01000037.1 Protein Homology CDS 30775 32313 . + 0 ID=cds-WP_032285656.1;Parent=gene-AC57_RS19205;Dbxref=GenBank:WP_032285656.1;Name=WP_032285656.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415351.1;locus_tag=AC57_RS19205;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_032285656.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 32331 33251 . + . ID=gene-AC57_RS19200;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AC57_RS19200;old_locus_tag=AC57_0842 NZ_JJLR01000037.1 Protein Homology CDS 32331 33251 . + 0 ID=cds-WP_000936043.1;Parent=gene-AC57_RS19200;Dbxref=GenBank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AC57_RS19200;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 33254 34165 . + . ID=gene-AC57_RS19195;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AC57_RS19195;old_locus_tag=AC57_0843 NZ_JJLR01000037.1 Protein Homology CDS 33254 34165 . + 0 ID=cds-WP_001236051.1;Parent=gene-AC57_RS19195;Dbxref=GenBank:WP_001236051.1;Name=WP_001236051.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415353.1;locus_tag=AC57_RS19195;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236051.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 34343 36691 . + . ID=gene-AC57_RS19190;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AC57_RS19190;old_locus_tag=AC57_0844 NZ_JJLR01000037.1 Protein Homology CDS 34343 36691 . + 0 ID=cds-WP_001459603.1;Parent=gene-AC57_RS19190;Dbxref=GenBank:WP_001459603.1;Name=WP_001459603.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AC57_RS19190;product=sensor domain-containing phosphodiesterase;protein_id=WP_001459603.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 36699 38027 . + . ID=gene-AC57_RS19185;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AC57_RS19185;old_locus_tag=AC57_0845 NZ_JJLR01000037.1 Protein Homology CDS 36699 38027 . + 0 ID=cds-WP_032236987.1;Parent=gene-AC57_RS19185;Dbxref=GenBank:WP_032236987.1;Name=WP_032236987.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415355.1;locus_tag=AC57_RS19185;product=GGDEF domain-containing protein;protein_id=WP_032236987.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 38074 39399 . - . ID=gene-AC57_RS19180;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AC57_RS19180;old_locus_tag=AC57_0846 NZ_JJLR01000037.1 Protein Homology CDS 38074 39399 . - 0 ID=cds-WP_000049367.1;Parent=gene-AC57_RS19180;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AC57_RS19180;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 39612 39995 . + . ID=gene-AC57_RS19175;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AC57_RS19175;old_locus_tag=AC57_0847 NZ_JJLR01000037.1 Protein Homology CDS 39612 39995 . + 0 ID=cds-WP_000497137.1;Parent=gene-AC57_RS19175;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AC57_RS19175;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 40106 41221 . + . ID=gene-AC57_RS19170;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AC57_RS19170;old_locus_tag=AC57_0848 NZ_JJLR01000037.1 Protein Homology CDS 40106 41221 . + 0 ID=cds-WP_000554946.1;Parent=gene-AC57_RS19170;Dbxref=GenBank:WP_000554946.1;Name=WP_000554946.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308944.1;locus_tag=AC57_RS19170;product=aldose sugar dehydrogenase YliI;protein_id=WP_000554946.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 41218 41844 . - . ID=gene-AC57_RS19165;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AC57_RS19165;old_locus_tag=AC57_0849 NZ_JJLR01000037.1 Protein Homology CDS 41218 41844 . - 0 ID=cds-WP_032236988.1;Parent=gene-AC57_RS19165;Dbxref=GenBank:WP_032236988.1;Name=WP_032236988.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AC57_RS19165;product=glutathione S-transferase GstB;protein_id=WP_032236988.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 42091 43293 . + . ID=gene-AC57_RS19160;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AC57_RS19160;old_locus_tag=AC57_0850 NZ_JJLR01000037.1 Protein Homology CDS 42091 43293 . + 0 ID=cds-WP_001300708.1;Parent=gene-AC57_RS19160;Dbxref=GenBank:WP_001300708.1;Name=WP_001300708.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415360.1;locus_tag=AC57_RS19160;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001300708.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 43340 44098 . - . ID=gene-AC57_RS19155;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AC57_RS19155;old_locus_tag=AC57_0851 NZ_JJLR01000037.1 Protein Homology CDS 43340 44098 . - 0 ID=cds-WP_000450121.1;Parent=gene-AC57_RS19155;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AC57_RS19155;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 44156 44752 . - . ID=gene-AC57_RS19150;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AC57_RS19150;old_locus_tag=AC57_0852 NZ_JJLR01000037.1 Protein Homology CDS 44156 44752 . - 0 ID=cds-WP_001295291.1;Parent=gene-AC57_RS19150;Dbxref=GenBank:WP_001295291.1;Name=WP_001295291.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415362.1;locus_tag=AC57_RS19150;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001295291.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 45037 46269 . + . ID=gene-AC57_RS19145;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AC57_RS19145;old_locus_tag=AC57_0853 NZ_JJLR01000037.1 Protein Homology CDS 45037 46269 . + 0 ID=cds-WP_001180089.1;Parent=gene-AC57_RS19145;Dbxref=GenBank:WP_001180089.1;Name=WP_001180089.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AC57_RS19145;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180089.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 46310 46594 . - . ID=gene-AC57_RS19140;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AC57_RS19140;old_locus_tag=AC57_0854 NZ_JJLR01000037.1 Protein Homology CDS 46310 46594 . - 0 ID=cds-WP_000605480.1;Parent=gene-AC57_RS19140;Dbxref=GenBank:WP_000605480.1;Name=WP_000605480.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AC57_RS19140;product=protein YbjH;protein_id=WP_000605480.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 46680 47495 . - . ID=gene-AC57_RS19135;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AC57_RS19135;old_locus_tag=AC57_0855 NZ_JJLR01000037.1 Protein Homology CDS 46680 47495 . - 0 ID=cds-WP_000023565.1;Parent=gene-AC57_RS19135;Dbxref=GenBank:WP_000023565.1;Name=WP_000023565.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415365.4;locus_tag=AC57_RS19135;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_000023565.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 47495 48703 . - . ID=gene-AC57_RS19130;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AC57_RS19130;old_locus_tag=AC57_0856 NZ_JJLR01000037.1 Protein Homology CDS 47495 48703 . - 0 ID=cds-WP_032236990.1;Parent=gene-AC57_RS19130;Dbxref=GenBank:WP_032236990.1;Name=WP_032236990.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415366.1;locus_tag=AC57_RS19130;product=MFS transporter;protein_id=WP_032236990.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 48787 49323 . + . ID=gene-AC57_RS19125;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AC57_RS19125;old_locus_tag=AC57_0857 NZ_JJLR01000037.1 Protein Homology CDS 48787 49323 . + 0 ID=cds-WP_001295289.1;Parent=gene-AC57_RS19125;Dbxref=GenBank:WP_001295289.1;Name=WP_001295289.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415367.1;locus_tag=AC57_RS19125;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_001295289.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 49498 51183 . - . ID=gene-AC57_RS19120;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AC57_RS19120;old_locus_tag=AC57_0858 NZ_JJLR01000037.1 Protein Homology CDS 49498 51183 . - 0 ID=cds-WP_001024876.1;Parent=gene-AC57_RS19120;Dbxref=GenBank:WP_001024876.1;Name=WP_001024876.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AC57_RS19120;product=aspartate:alanine antiporter;protein_id=WP_001024876.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 51453 51830 . + . ID=gene-AC57_RS19115;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AC57_RS19115;old_locus_tag=AC57_0859 NZ_JJLR01000037.1 Protein Homology CDS 51453 51830 . + 0 ID=cds-WP_000681108.1;Parent=gene-AC57_RS19115;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AC57_RS19115;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 51860 52117 . - . ID=gene-AC57_RS19110;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AC57_RS19110;old_locus_tag=AC57_0860 NZ_JJLR01000037.1 Protein Homology CDS 51860 52117 . - 0 ID=cds-WP_001195240.1;Parent=gene-AC57_RS19110;Dbxref=GenBank:WP_001195240.1;Name=WP_001195240.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415370.1;locus_tag=AC57_RS19110;product=glutaredoxin 1;protein_id=WP_001195240.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 52277 52564 . + . ID=gene-AC57_RS19105;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AC57_RS19105;old_locus_tag=AC57_0861 NZ_JJLR01000037.1 Protein Homology CDS 52277 52564 . + 0 ID=cds-WP_001201560.1;Parent=gene-AC57_RS19105;Dbxref=GenBank:WP_001201560.1;Name=WP_001201560.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415371.1;locus_tag=AC57_RS19105;product=DUF1418 family protein;protein_id=WP_001201560.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 52548 53270 . + . ID=gene-AC57_RS19100;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=AC57_RS19100;old_locus_tag=AC57_0862 NZ_JJLR01000037.1 Protein Homology CDS 52548 53270 . + 0 ID=cds-WP_001501153.1;Parent=gene-AC57_RS19100;Dbxref=GenBank:WP_001501153.1;Name=WP_001501153.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415372.1;locus_tag=AC57_RS19100;product=nitroreductase NfsA;protein_id=WP_001501153.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 53331 54233 . + . ID=gene-AC57_RS19095;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AC57_RS19095;old_locus_tag=AC57_0863 NZ_JJLR01000037.1 Protein Homology CDS 53331 54233 . + 0 ID=cds-WP_000684321.1;Parent=gene-AC57_RS19095;Dbxref=GenBank:WP_000684321.1;Name=WP_000684321.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AC57_RS19095;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 54321 54797 . + . ID=gene-AC57_RS19090;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AC57_RS19090;old_locus_tag=AC57_0864 NZ_JJLR01000037.1 Protein Homology CDS 54321 54797 . + 0 ID=cds-WP_000203025.1;Parent=gene-AC57_RS19090;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AC57_RS19090;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 55148 56260 . + . ID=gene-AC57_RS19080;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AC57_RS19080;old_locus_tag=AC57_0867 NZ_JJLR01000037.1 Protein Homology CDS 55148 56260 . + 0 ID=cds-WP_032279560.1;Parent=gene-AC57_RS19080;Dbxref=GenBank:WP_032279560.1;Name=WP_032279560.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415375.1;locus_tag=AC57_RS19080;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_032279560.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 56355 57488 . + . ID=gene-AC57_RS19075;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AC57_RS19075;old_locus_tag=AC57_0868 NZ_JJLR01000037.1 Protein Homology CDS 56355 57488 . + 0 ID=cds-WP_000996005.1;Parent=gene-AC57_RS19075;Dbxref=GenBank:WP_000996005.1;Name=WP_000996005.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AC57_RS19075;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_000996005.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 57498 58451 . + . ID=gene-AC57_RS19070;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AC57_RS19070;old_locus_tag=AC57_0869 NZ_JJLR01000037.1 Protein Homology CDS 57498 58451 . + 0 ID=cds-WP_000105430.1;Parent=gene-AC57_RS19070;Dbxref=GenBank:WP_000105430.1;Name=WP_000105430.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415377.1;locus_tag=AC57_RS19070;product=putrescine ABC transporter permease PotH;protein_id=WP_000105430.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 58448 59293 . + . ID=gene-AC57_RS19065;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AC57_RS19065;old_locus_tag=AC57_0870 NZ_JJLR01000037.1 Protein Homology CDS 58448 59293 . + 0 ID=cds-WP_032236991.1;Parent=gene-AC57_RS19065;Dbxref=GenBank:WP_032236991.1;Name=WP_032236991.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AC57_RS19065;product=putrescine ABC transporter permease PotI;protein_id=WP_032236991.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 59353 59841 . + . ID=gene-AC57_RS19060;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AC57_RS19060;old_locus_tag=AC57_0871 NZ_JJLR01000037.1 Protein Homology CDS 59353 59841 . + 0 ID=cds-WP_000389260.1;Parent=gene-AC57_RS19060;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AC57_RS19060;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 59882 61009 . + . ID=gene-AC57_RS19055;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AC57_RS19055;old_locus_tag=AC57_0872 NZ_JJLR01000037.1 Protein Homology CDS 59882 61009 . + 0 ID=cds-WP_032279558.1;Parent=gene-AC57_RS19055;Dbxref=GenBank:WP_032279558.1;Name=WP_032279558.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415380.1;locus_tag=AC57_RS19055;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_032279558.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 61208 61939 . - . ID=gene-AC57_RS19050;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AC57_RS19050;old_locus_tag=AC57_0873 NZ_JJLR01000037.1 Protein Homology CDS 61208 61939 . - 0 ID=cds-WP_001295339.1;Parent=gene-AC57_RS19050;Dbxref=GenBank:WP_001295339.1;Name=WP_001295339.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AC57_RS19050;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_001295339.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 62230 62898 . - . ID=gene-AC57_RS19045;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AC57_RS19045;old_locus_tag=AC57_0874 NZ_JJLR01000037.1 Protein Homology CDS 62230 62898 . - 0 ID=cds-WP_000464491.1;Parent=gene-AC57_RS19045;Dbxref=GenBank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AC57_RS19045;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 62898 63614 . - . ID=gene-AC57_RS19040;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AC57_RS19040;old_locus_tag=AC57_0875 NZ_JJLR01000037.1 Protein Homology CDS 62898 63614 . - 0 ID=cds-WP_001001691.1;Parent=gene-AC57_RS19040;Dbxref=GenBank:WP_001001691.1;Name=WP_001001691.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AC57_RS19040;product=arginine ABC transporter permease ArtQ;protein_id=WP_001001691.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 63621 64352 . - . ID=gene-AC57_RS19035;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AC57_RS19035;old_locus_tag=AC57_0876 NZ_JJLR01000037.1 Protein Homology CDS 63621 64352 . - 0 ID=cds-WP_000756569.1;Parent=gene-AC57_RS19035;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AC57_RS19035;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 64370 65098 . - . ID=gene-AC57_RS19030;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AC57_RS19030;old_locus_tag=AC57_0877 NZ_JJLR01000037.1 Protein Homology CDS 64370 65098 . - 0 ID=cds-WP_000027205.1;Parent=gene-AC57_RS19030;Dbxref=GenBank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AC57_RS19030;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 65316 65831 . - . ID=gene-AC57_RS19025;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AC57_RS19025;old_locus_tag=AC57_0878 NZ_JJLR01000037.1 Protein Homology CDS 65316 65831 . - 0 ID=cds-WP_001398834.1;Parent=gene-AC57_RS19025;Dbxref=GenBank:WP_001398834.1;Name=WP_001398834.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=AC57_RS19025;product=lipoprotein;protein_id=WP_001398834.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 65957 66280 . + . ID=gene-AC57_RS19020;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AC57_RS19020;old_locus_tag=AC57_0879 NZ_JJLR01000037.1 Protein Homology CDS 65957 66280 . + 0 ID=cds-WP_001160737.1;Parent=gene-AC57_RS19020;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AC57_RS19020;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 66277 67107 . + . ID=gene-AC57_RS19015;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AC57_RS19015;old_locus_tag=AC57_0880 NZ_JJLR01000037.1 Protein Homology CDS 66277 67107 . + 0 ID=cds-WP_001255167.1;Parent=gene-AC57_RS19015;Dbxref=GenBank:WP_001255167.1;Name=WP_001255167.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AC57_RS19015;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001255167.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 67104 68117 . - . ID=gene-AC57_RS19010;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AC57_RS19010;old_locus_tag=AC57_0881 NZ_JJLR01000037.1 Protein Homology CDS 67104 68117 . - 0 ID=cds-WP_001338420.1;Parent=gene-AC57_RS19010;Dbxref=GenBank:WP_001338420.1;Name=WP_001338420.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AC57_RS19010;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001338420.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 68216 69646 . - . ID=gene-AC57_RS19005;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AC57_RS19005;old_locus_tag=AC57_0882 NZ_JJLR01000037.1 Protein Homology CDS 68216 69646 . - 0 ID=cds-WP_032285657.1;Parent=gene-AC57_RS19005;Dbxref=GenBank:WP_032285657.1;Name=WP_032285657.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AC57_RS19005;product=SDR family oxidoreductase;protein_id=WP_032285657.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 69657 70658 . - . ID=gene-AC57_RS19000;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AC57_RS19000;old_locus_tag=AC57_0883 NZ_JJLR01000037.1 Protein Homology CDS 69657 70658 . - 0 ID=cds-WP_000566372.1;Parent=gene-AC57_RS19000;Dbxref=GenBank:WP_000566372.1;Name=WP_000566372.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706751.1;locus_tag=AC57_RS19000;product=low-specificity L-threonine aldolase;protein_id=WP_000566372.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 70695 72413 . - . ID=gene-AC57_RS18995;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AC57_RS18995;old_locus_tag=AC57_0884 NZ_JJLR01000037.1 Protein Homology CDS 70695 72413 . - 0 ID=cds-WP_032279555.1;Parent=gene-AC57_RS18995;Dbxref=GenBank:WP_032279555.1;Name=WP_032279555.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=AC57_RS18995;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_032279555.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 72546 73514 . - . ID=gene-AC57_RS18990;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AC57_RS18990;old_locus_tag=AC57_0885 NZ_JJLR01000037.1 Protein Homology CDS 72546 73514 . - 0 ID=cds-WP_032236994.1;Parent=gene-AC57_RS18990;Dbxref=GenBank:WP_032236994.1;Name=WP_032236994.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415393.1;locus_tag=AC57_RS18990;product=NADH oxidoreductase;protein_id=WP_032236994.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 73526 75178 . - . ID=gene-AC57_RS18985;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AC57_RS18985;old_locus_tag=AC57_0886 NZ_JJLR01000037.1 Protein Homology CDS 73526 75178 . - 0 ID=cds-WP_000458809.1;Parent=gene-AC57_RS18985;Dbxref=GenBank:WP_000458809.1;Name=WP_000458809.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AC57_RS18985;product=hydroxylamine reductase;protein_id=WP_000458809.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 75322 76221 . - . ID=gene-AC57_RS18980;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AC57_RS18980;old_locus_tag=AC57_0887 NZ_JJLR01000037.1 Protein Homology CDS 75322 76221 . - 0 ID=cds-WP_001338421.1;Parent=gene-AC57_RS18980;Dbxref=GenBank:WP_001338421.1;Name=WP_001338421.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308987.1;locus_tag=AC57_RS18980;product=L-lysine exporter LysO;protein_id=WP_001338421.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 76716 77411 . - . ID=gene-AC57_RS18975;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=AC57_RS18975;old_locus_tag=AC57_0888 NZ_JJLR01000037.1 Protein Homology CDS 76716 77411 . - 0 ID=cds-WP_001298299.1;Parent=gene-AC57_RS18975;Dbxref=GenBank:WP_001298299.1;Name=WP_001298299.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415396.1;locus_tag=AC57_RS18975;product=aquaporin Z;protein_id=WP_001298299.1;transl_table=11 NZ_JJLR01000037.1 RefSeq gene 77599 77698 . + . ID=gene-AC57_RS26750;Name=AC57_RS26750;end_range=77698,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26750;old_locus_tag=AC57_0889;partial=true NZ_JJLR01000037.1 Protein Homology CDS 77599 77698 . + 0 ID=cds-WP_001413871.1;Parent=gene-AC57_RS26750;Dbxref=GenBank:WP_001413871.1;Name=WP_001413871.1;Ontology_term=GO:0006313;end_range=77698,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26750;partial=true;product=IS1 family transposase;protein_id=WP_001413871.1;transl_table=11 ##sequence-region NZ_JJLR01000038.1 1 29681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000038.1 RefSeq region 1 29681 . + . ID=NZ_JJLR01000038.1:1..29681;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000038.1 RefSeq gene 1 214 . + . ID=gene-AC57_RS18970;Name=AC57_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18970;old_locus_tag=AC57_0890;partial=true;start_range=.,1 NZ_JJLR01000038.1 Protein Homology CDS 1 214 . + 1 ID=cds-WP_000327107.1;Parent=gene-AC57_RS18970;Dbxref=GenBank:WP_000327107.1;Name=WP_000327107.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS18970;partial=true;product=IS1 family transposase;protein_id=WP_000327107.1;start_range=.,1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 531 2189 . + . ID=gene-AC57_RS18965;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AC57_RS18965;old_locus_tag=AC57_0891 NZ_JJLR01000038.1 Protein Homology CDS 531 2189 . + 0 ID=cds-WP_000599802.1;Parent=gene-AC57_RS18965;Dbxref=GenBank:WP_000599802.1;Name=WP_000599802.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415397.1;locus_tag=AC57_RS18965;product=ATP-dependent endonuclease;protein_id=WP_000599802.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 2186 3142 . - . ID=gene-AC57_RS18960;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AC57_RS18960;old_locus_tag=AC57_0892 NZ_JJLR01000038.1 Protein Homology CDS 2186 3142 . - 0 ID=cds-WP_001380339.1;Parent=gene-AC57_RS18960;Dbxref=GenBank:WP_001380339.1;Name=WP_001380339.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AC57_RS18960;product=VirK/YbjX family protein;protein_id=WP_001380339.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 3293 4408 . + . ID=gene-AC57_RS18955;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AC57_RS18955;old_locus_tag=AC57_0893 NZ_JJLR01000038.1 Protein Homology CDS 3293 4408 . + 0 ID=cds-WP_000746460.1;Parent=gene-AC57_RS18955;Dbxref=GenBank:WP_000746460.1;Name=WP_000746460.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308991.2;locus_tag=AC57_RS18955;product=macrolide transporter subunit MacA;protein_id=WP_000746460.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 4405 6351 . + . ID=gene-AC57_RS18950;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AC57_RS18950;old_locus_tag=AC57_0894 NZ_JJLR01000038.1 Protein Homology CDS 4405 6351 . + 0 ID=cds-WP_032279889.1;Parent=gene-AC57_RS18950;Dbxref=GenBank:WP_032279889.1;Name=WP_032279889.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415400.1;locus_tag=AC57_RS18950;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_032279889.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 6424 6648 . - . ID=gene-AC57_RS18945;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AC57_RS18945;old_locus_tag=AC57_0895 NZ_JJLR01000038.1 Protein Homology CDS 6424 6648 . - 0 ID=cds-WP_000410785.1;Parent=gene-AC57_RS18945;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AC57_RS18945;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 6798 6872 . + . ID=gene-AC57_RS30485;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AC57_RS30485 NZ_JJLR01000038.1 Protein Homology CDS 6798 6872 . + 0 ID=cds-WP_001406719.1;Parent=gene-AC57_RS30485;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AC57_RS30485;product=protein YljB;protein_id=WP_001406719.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 6971 7291 . + . ID=gene-AC57_RS18940;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AC57_RS18940;old_locus_tag=AC57_0896 NZ_JJLR01000038.1 Protein Homology CDS 6971 7291 . + 0 ID=cds-WP_000520781.1;Parent=gene-AC57_RS18940;Dbxref=GenBank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AC57_RS18940;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 7322 9598 . + . ID=gene-AC57_RS18935;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AC57_RS18935;old_locus_tag=AC57_0897 NZ_JJLR01000038.1 Protein Homology CDS 7322 9598 . + 0 ID=cds-WP_000934040.1;Parent=gene-AC57_RS18935;Dbxref=GenBank:WP_000934040.1;Name=WP_000934040.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AC57_RS18935;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934040.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 10058 10145 . - . ID=gene-AC57_RS18930;Name=AC57_RS18930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS18930;old_locus_tag=AC57_0898 NZ_JJLR01000038.1 tRNAscan-SE tRNA 10058 10145 . - . ID=rna-AC57_RS18930;Parent=gene-AC57_RS18930;anticodon=(pos:complement(10109..10111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS18930;product=tRNA-Ser NZ_JJLR01000038.1 tRNAscan-SE exon 10058 10145 . - . ID=exon-AC57_RS18930-1;Parent=rna-AC57_RS18930;anticodon=(pos:complement(10109..10111));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS18930;product=tRNA-Ser NZ_JJLR01000038.1 RefSeq gene 10399 10617 . - . ID=gene-AC57_RS18925;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AC57_RS18925;old_locus_tag=AC57_0899 NZ_JJLR01000038.1 Protein Homology CDS 10399 10617 . - 0 ID=cds-WP_001040187.1;Parent=gene-AC57_RS18925;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AC57_RS18925;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 10902 11606 . - . ID=gene-AC57_RS18920;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AC57_RS18920;old_locus_tag=AC57_0900 NZ_JJLR01000038.1 Protein Homology CDS 10902 11606 . - 0 ID=cds-WP_001241678.1;Parent=gene-AC57_RS18920;Dbxref=GenBank:WP_001241678.1;Name=WP_001241678.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AC57_RS18920;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_001241678.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 11648 13369 . - . ID=gene-AC57_RS18915;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AC57_RS18915;old_locus_tag=AC57_0901 NZ_JJLR01000038.1 Protein Homology CDS 11648 13369 . - 0 ID=cds-WP_032236996.1;Parent=gene-AC57_RS18915;Dbxref=GenBank:WP_032236996.1;Name=WP_032236996.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AC57_RS18915;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_032236996.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 13370 15136 . - . ID=gene-AC57_RS18910;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AC57_RS18910;old_locus_tag=AC57_0902 NZ_JJLR01000038.1 Protein Homology CDS 13370 15136 . - 0 ID=cds-WP_001043577.1;Parent=gene-AC57_RS18910;Dbxref=GenBank:WP_001043577.1;Name=WP_001043577.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706772.1;locus_tag=AC57_RS18910;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_001043577.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 15259 16224 . - . ID=gene-AC57_RS18905;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AC57_RS18905;old_locus_tag=AC57_0903 NZ_JJLR01000038.1 Protein Homology CDS 15259 16224 . - 0 ID=cds-WP_000537418.1;Parent=gene-AC57_RS18905;Dbxref=GenBank:WP_000537418.1;Name=WP_000537418.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AC57_RS18905;product=thioredoxin-disulfide reductase;protein_id=WP_000537418.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 16769 17263 . + . ID=gene-AC57_RS18900;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AC57_RS18900;old_locus_tag=AC57_0905 NZ_JJLR01000038.1 Protein Homology CDS 16769 17263 . + 0 ID=cds-WP_000228473.1;Parent=gene-AC57_RS18900;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AC57_RS18900;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 17398 21387 . + . ID=gene-AC57_RS18895;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AC57_RS18895;old_locus_tag=AC57_0906 NZ_JJLR01000038.1 Protein Homology CDS 17398 21387 . + 0 ID=cds-WP_032279890.1;Parent=gene-AC57_RS18895;Dbxref=GenBank:WP_032279890.1;Name=WP_032279890.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AC57_RS18895;product=DNA translocase FtsK;protein_id=WP_032279890.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 21542 22153 . + . ID=gene-AC57_RS18890;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AC57_RS18890;old_locus_tag=AC57_0907 NZ_JJLR01000038.1 Protein Homology CDS 21542 22153 . + 0 ID=cds-WP_001295343.1;Parent=gene-AC57_RS18890;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AC57_RS18890;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 22164 23507 . + . ID=gene-AC57_RS18885;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AC57_RS18885;old_locus_tag=AC57_0908 NZ_JJLR01000038.1 Protein Homology CDS 22164 23507 . + 0 ID=cds-WP_000067755.1;Parent=gene-AC57_RS18885;Dbxref=GenBank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AC57_RS18885;product=replication-associated recombination protein RarA;protein_id=WP_000067755.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 23598 24890 . + . ID=gene-AC57_RS18880;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AC57_RS18880;old_locus_tag=AC57_0909 NZ_JJLR01000038.1 Protein Homology CDS 23598 24890 . + 0 ID=cds-WP_000886683.1;Parent=gene-AC57_RS18880;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AC57_RS18880;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JJLR01000038.1 RefSeq pseudogene 25129 27574 . + . ID=gene-AC57_RS0123395;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=pseudogene;locus_tag=AC57_RS0123395;old_locus_tag=AC57_0911;pseudo=true NZ_JJLR01000038.1 Protein Homology CDS 25129 27574 . + 0 ID=cds-AC57_RS0123395;Parent=gene-AC57_RS0123395;Note=frameshifted;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309006.2;locus_tag=AC57_RS0123395;product=dimethylsulfoxide reductase subunit A;pseudo=true;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 27585 28202 . + . ID=gene-AC57_RS18875;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AC57_RS18875;old_locus_tag=AC57_0912 NZ_JJLR01000038.1 Protein Homology CDS 27585 28202 . + 0 ID=cds-WP_000213098.1;Parent=gene-AC57_RS18875;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AC57_RS18875;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11 NZ_JJLR01000038.1 RefSeq gene 28204 29067 . + . ID=gene-AC57_RS18870;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AC57_RS18870;old_locus_tag=AC57_0913 NZ_JJLR01000038.1 Protein Homology CDS 28204 29067 . + 0 ID=cds-WP_000534639.1;Parent=gene-AC57_RS18870;Dbxref=GenBank:WP_000534639.1;Name=WP_000534639.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415416.1;locus_tag=AC57_RS18870;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_000534639.1;transl_table=11 NZ_JJLR01000038.1 RefSeq pseudogene 29146 29681 . + . ID=gene-AC57_RS18865;Name=AC57_RS18865;end_range=29681,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS18865;old_locus_tag=AC57_0914;partial=true;pseudo=true NZ_JJLR01000038.1 Protein Homology CDS 29146 29681 . + 0 ID=cds-AC57_RS18865;Parent=gene-AC57_RS18865;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=29681,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS18865;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000039.1 1 118880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000039.1 RefSeq region 1 118880 . + . ID=NZ_JJLR01000039.1:1..118880;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000039.1 RefSeq gene 1 87 . + . ID=gene-AC57_RS30640;Name=AC57_RS30640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30640;partial=true;start_range=.,1 NZ_JJLR01000039.1 Protein Homology CDS 1 87 . + 0 ID=cds-WP_032245147.1;Parent=gene-AC57_RS30640;Dbxref=GenBank:WP_032245147.1;Name=WP_032245147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30640;partial=true;product=hypothetical protein;protein_id=WP_032245147.1;start_range=.,1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 280 906 . - . ID=gene-AC57_RS18860;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AC57_RS18860;old_locus_tag=AC57_0915 NZ_JJLR01000039.1 Protein Homology CDS 280 906 . - 0 ID=cds-WP_000165879.1;Parent=gene-AC57_RS18860;Dbxref=GenBank:WP_000165879.1;Name=WP_000165879.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415417.1;locus_tag=AC57_RS18860;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165879.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 1220 2368 . + . ID=gene-AC57_RS18855;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AC57_RS18855;old_locus_tag=AC57_0917 NZ_JJLR01000039.1 Protein Homology CDS 1220 2368 . + 0 ID=cds-WP_032237503.1;Parent=gene-AC57_RS18855;Dbxref=GenBank:WP_032237503.1;Name=WP_032237503.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309010.1;locus_tag=AC57_RS18855;product=MFS transporter;protein_id=WP_032237503.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 2578 4008 . + . ID=gene-AC57_RS18850;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=AC57_RS18850;old_locus_tag=AC57_0918 NZ_JJLR01000039.1 Protein Homology CDS 2578 4008 . + 0 ID=cds-WP_001430220.1;Parent=gene-AC57_RS18850;Dbxref=GenBank:WP_001430220.1;Name=WP_001430220.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AC57_RS18850;product=APC family permease;protein_id=WP_001430220.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 4009 4917 . - . ID=gene-AC57_RS18845;Name=ycaN;gbkey=Gene;gene=ycaN;gene_biotype=protein_coding;locus_tag=AC57_RS18845;old_locus_tag=AC57_0919 NZ_JJLR01000039.1 Protein Homology CDS 4009 4917 . - 0 ID=cds-WP_032279466.1;Parent=gene-AC57_RS18845;Dbxref=GenBank:WP_032279466.1;Name=WP_032279466.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycaN;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AC57_RS18845;product=LysR family transcriptional regulator;protein_id=WP_032279466.1;transl_table=11 NZ_JJLR01000039.1 RefSeq pseudogene 5017 5606 . + . ID=gene-AC57_RS18840;Name=ycaK;gbkey=Gene;gene=ycaK;gene_biotype=pseudogene;locus_tag=AC57_RS18840;old_locus_tag=AC57_0920;pseudo=true NZ_JJLR01000039.1 Protein Homology CDS 5017 5606 . + 0 ID=cds-AC57_RS18840;Parent=gene-AC57_RS18840;Note=frameshifted;gbkey=CDS;gene=ycaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415421.1;locus_tag=AC57_RS18840;product=NAD(P)H oxidoreductase;pseudo=true;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 5688 6428 . - . ID=gene-AC57_RS18835;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AC57_RS18835;old_locus_tag=AC57_0921 NZ_JJLR01000039.1 Protein Homology CDS 5688 6428 . - 0 ID=cds-WP_000111043.1;Parent=gene-AC57_RS18835;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AC57_RS18835;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 6620 8902 . - . ID=gene-AC57_RS18830;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AC57_RS18830;old_locus_tag=AC57_0922 NZ_JJLR01000039.1 Protein Homology CDS 6620 8902 . - 0 ID=cds-WP_001292822.1;Parent=gene-AC57_RS18830;Dbxref=GenBank:WP_001292822.1;Name=WP_001292822.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415423.1;locus_tag=AC57_RS18830;product=formate C-acetyltransferase;protein_id=WP_001292822.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 8957 9814 . - . ID=gene-AC57_RS29670;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AC57_RS29670;old_locus_tag=AC57_0923 NZ_JJLR01000039.1 Protein Homology CDS 8957 9814 . - 0 ID=cds-WP_000642546.1;Parent=gene-AC57_RS29670;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AC57_RS29670;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 10220 11980 . - . ID=gene-AC57_RS18820;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AC57_RS18820;old_locus_tag=AC57_0924 NZ_JJLR01000039.1 Protein Homology CDS 10220 11980 . - 0 ID=cds-WP_001295344.1;Parent=gene-AC57_RS18820;Dbxref=GenBank:WP_001295344.1;Name=WP_001295344.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AC57_RS18820;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_001295344.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 12110 12802 . + . ID=gene-AC57_RS18815;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AC57_RS18815;old_locus_tag=AC57_0925 NZ_JJLR01000039.1 Protein Homology CDS 12110 12802 . + 0 ID=cds-WP_032237500.1;Parent=gene-AC57_RS18815;Dbxref=GenBank:WP_032237500.1;Name=WP_032237500.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AC57_RS18815;product=DUF421 domain-containing protein;protein_id=WP_032237500.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 13001 14089 . + . ID=gene-AC57_RS18810;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AC57_RS18810;old_locus_tag=AC57_0926 NZ_JJLR01000039.1 Protein Homology CDS 13001 14089 . + 0 ID=cds-WP_000057138.1;Parent=gene-AC57_RS18810;Dbxref=GenBank:WP_000057138.1;Name=WP_000057138.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415427.1;locus_tag=AC57_RS18810;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057138.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 14160 15443 . + . ID=gene-AC57_RS18805;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AC57_RS18805;old_locus_tag=AC57_0927 NZ_JJLR01000039.1 Protein Homology CDS 14160 15443 . + 0 ID=cds-WP_032279467.1;Parent=gene-AC57_RS18805;Dbxref=GenBank:WP_032279467.1;Name=WP_032279467.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AC57_RS18805;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_032279467.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 15612 16376 . + . ID=gene-AC57_RS18800;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AC57_RS18800;old_locus_tag=AC57_0928 NZ_JJLR01000039.1 Protein Homology CDS 15612 16376 . + 0 ID=cds-WP_001295345.1;Parent=gene-AC57_RS18800;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AC57_RS18800;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 16549 17232 . + . ID=gene-AC57_RS18795;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AC57_RS18795;old_locus_tag=AC57_0929 NZ_JJLR01000039.1 Protein Homology CDS 16549 17232 . + 0 ID=cds-WP_000125016.1;Parent=gene-AC57_RS18795;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AC57_RS18795;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 17343 19016 . + . ID=gene-AC57_RS18790;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AC57_RS18790;old_locus_tag=AC57_0930 NZ_JJLR01000039.1 Protein Homology CDS 17343 19016 . + 0 ID=cds-WP_000140327.1;Parent=gene-AC57_RS18790;Dbxref=GenBank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AC57_RS18790;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 19176 19460 . + . ID=gene-AC57_RS18785;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AC57_RS18785;old_locus_tag=AC57_0931 NZ_JJLR01000039.1 Protein Homology CDS 19176 19460 . + 0 ID=cds-WP_000167336.1;Parent=gene-AC57_RS18785;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AC57_RS18785;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 19668 21932 . + . ID=gene-AC57_RS18780;Name=ycaI;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=AC57_RS18780;old_locus_tag=AC57_0932 NZ_JJLR01000039.1 Protein Homology CDS 19668 21932 . + 0 ID=cds-WP_000705764.1;Parent=gene-AC57_RS18780;Dbxref=GenBank:WP_000705764.1;Name=WP_000705764.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;gene=ycaI;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415433.4;locus_tag=AC57_RS18780;product=ComEC family protein;protein_id=WP_000705764.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 21969 23717 . + . ID=gene-AC57_RS18775;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AC57_RS18775;old_locus_tag=AC57_0933 NZ_JJLR01000039.1 Protein Homology CDS 21969 23717 . + 0 ID=cds-WP_000551270.1;Parent=gene-AC57_RS18775;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AC57_RS18775;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 23714 24700 . + . ID=gene-AC57_RS18770;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AC57_RS18770;old_locus_tag=AC57_0934 NZ_JJLR01000039.1 Protein Homology CDS 23714 24700 . + 0 ID=cds-WP_000570539.1;Parent=gene-AC57_RS18770;Dbxref=GenBank:WP_000570539.1;Name=WP_000570539.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415435.1;locus_tag=AC57_RS18770;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570539.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 24737 25969 . + . ID=gene-AC57_RS18765;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AC57_RS18765;old_locus_tag=AC57_0935 NZ_JJLR01000039.1 Protein Homology CDS 24737 25969 . + 0 ID=cds-WP_001752386.1;Parent=gene-AC57_RS18765;Dbxref=GenBank:WP_001752386.1;Name=WP_001752386.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415436.1;locus_tag=AC57_RS18765;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_001752386.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 26021 26203 . + . ID=gene-AC57_RS18760;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AC57_RS18760;old_locus_tag=AC57_0936 NZ_JJLR01000039.1 Protein Homology CDS 26021 26203 . + 0 ID=cds-WP_000350058.1;Parent=gene-AC57_RS18760;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AC57_RS18760;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 26200 26946 . + . ID=gene-AC57_RS18755;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AC57_RS18755;old_locus_tag=AC57_0937 NZ_JJLR01000039.1 Protein Homology CDS 26200 26946 . + 0 ID=cds-WP_000011603.1;Parent=gene-AC57_RS18755;Dbxref=GenBank:WP_000011603.1;Name=WP_000011603.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415438.1;locus_tag=AC57_RS18755;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_000011603.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 27100 27993 . + . ID=gene-AC57_RS18750;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AC57_RS18750;old_locus_tag=AC57_0938 NZ_JJLR01000039.1 Protein Homology CDS 27100 27993 . + 0 ID=cds-WP_000436922.1;Parent=gene-AC57_RS18750;Dbxref=GenBank:WP_000436922.1;Name=WP_000436922.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AC57_RS18750;product=YcbJ family phosphotransferase;protein_id=WP_000436922.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 27970 28749 . - . ID=gene-AC57_RS18745;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AC57_RS18745;old_locus_tag=AC57_0939 NZ_JJLR01000039.1 Protein Homology CDS 27970 28749 . - 0 ID=cds-WP_000899600.1;Parent=gene-AC57_RS18745;Dbxref=GenBank:WP_000899600.1;Name=WP_000899600.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309030.1;locus_tag=AC57_RS18745;product=envelope biogenesis factor ElyC;protein_id=WP_000899600.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 28885 29670 . + . ID=gene-AC57_RS18740;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AC57_RS18740;old_locus_tag=AC57_0940 NZ_JJLR01000039.1 Protein Homology CDS 28885 29670 . + 0 ID=cds-WP_001298300.1;Parent=gene-AC57_RS18740;Dbxref=GenBank:WP_001298300.1;Name=WP_001298300.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AC57_RS18740;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_001298300.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 29667 30989 . + . ID=gene-AC57_RS18735;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AC57_RS18735;old_locus_tag=AC57_0941 NZ_JJLR01000039.1 Protein Homology CDS 29667 30989 . + 0 ID=cds-WP_001288850.1;Parent=gene-AC57_RS18735;Dbxref=GenBank:WP_001288850.1;Name=WP_001288850.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AC57_RS18735;product=chromosome partition protein MukF;protein_id=WP_001288850.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 30970 31674 . + . ID=gene-AC57_RS18730;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AC57_RS18730;old_locus_tag=AC57_0942 NZ_JJLR01000039.1 Protein Homology CDS 30970 31674 . + 0 ID=cds-WP_001295347.1;Parent=gene-AC57_RS18730;Dbxref=GenBank:WP_001295347.1;Name=WP_001295347.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=AC57_RS18730;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 31674 36134 . + . ID=gene-AC57_RS18725;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AC57_RS18725;old_locus_tag=AC57_0943 NZ_JJLR01000039.1 Protein Homology CDS 31674 36134 . + 0 ID=cds-WP_032279469.1;Parent=gene-AC57_RS18725;Dbxref=GenBank:WP_032279469.1;Name=WP_032279469.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415444.1;locus_tag=AC57_RS18725;product=chromosome partition protein MukB;protein_id=WP_032279469.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 36394 38241 . + . ID=gene-AC57_RS18720;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AC57_RS18720;old_locus_tag=AC57_0944 NZ_JJLR01000039.1 Protein Homology CDS 36394 38241 . + 0 ID=cds-WP_000925985.1;Parent=gene-AC57_RS18720;Dbxref=GenBank:WP_000925985.1;Name=WP_000925985.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AC57_RS18720;product=L%2CD-transpeptidase;protein_id=WP_000925985.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 38422 38970 . + . ID=gene-AC57_RS18715;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AC57_RS18715;old_locus_tag=AC57_0945 NZ_JJLR01000039.1 Protein Homology CDS 38422 38970 . + 0 ID=cds-WP_001295932.1;Parent=gene-AC57_RS18715;Dbxref=GenBank:WP_001295932.1;Name=WP_001295932.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AC57_RS18715;product=YcbK family protein;protein_id=WP_001295932.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 38997 39644 . + . ID=gene-AC57_RS18710;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AC57_RS18710;old_locus_tag=AC57_0946 NZ_JJLR01000039.1 Protein Homology CDS 38997 39644 . + 0 ID=cds-WP_001109487.1;Parent=gene-AC57_RS18710;Dbxref=GenBank:WP_001109487.1;Name=WP_001109487.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AC57_RS18710;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109487.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 39866 41056 . - . ID=gene-AC57_RS18705;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AC57_RS18705;old_locus_tag=AC57_0947 NZ_JJLR01000039.1 Protein Homology CDS 39866 41056 . - 0 ID=cds-WP_000462687.1;Parent=gene-AC57_RS18705;Dbxref=GenBank:WP_000462687.1;Name=WP_000462687.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AC57_RS18705;product=aspartate transaminase;protein_id=WP_000462687.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 41241 42329 . - . ID=gene-AC57_RS18700;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AC57_RS18700;old_locus_tag=AC57_0948 NZ_JJLR01000039.1 Protein Homology CDS 41241 42329 . - 0 ID=cds-WP_032237498.1;Parent=gene-AC57_RS18700;Dbxref=GenBank:WP_032237498.1;Name=WP_032237498.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415449.1;locus_tag=AC57_RS18700;product=porin OmpF;protein_id=WP_032237498.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 42932 44332 . - . ID=gene-AC57_RS18695;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AC57_RS18695;old_locus_tag=AC57_0950 NZ_JJLR01000039.1 Protein Homology CDS 42932 44332 . - 0 ID=cds-WP_032285658.1;Parent=gene-AC57_RS18695;Dbxref=GenBank:WP_032285658.1;Name=WP_032285658.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AC57_RS18695;product=asparagine--tRNA ligase;protein_id=WP_032285658.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 44501 45703 . - . ID=gene-AC57_RS18690;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AC57_RS18690;old_locus_tag=AC57_0951 NZ_JJLR01000039.1 Protein Homology CDS 44501 45703 . - 0 ID=cds-WP_001307697.1;Parent=gene-AC57_RS18690;Dbxref=GenBank:WP_001307697.1;Name=WP_001307697.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=AC57_RS18690;product=nicotinate phosphoribosyltransferase;protein_id=WP_001307697.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 45969 48581 . + . ID=gene-AC57_RS18685;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AC57_RS18685;old_locus_tag=AC57_0953 NZ_JJLR01000039.1 Protein Homology CDS 45969 48581 . + 0 ID=cds-WP_032246295.1;Parent=gene-AC57_RS18685;Dbxref=GenBank:WP_032246295.1;Name=WP_032246295.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AC57_RS18685;product=aminopeptidase N;protein_id=WP_032246295.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 48624 49391 . - . ID=gene-AC57_RS18680;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AC57_RS18680;old_locus_tag=AC57_0954 NZ_JJLR01000039.1 Protein Homology CDS 48624 49391 . - 0 ID=cds-WP_001090506.1;Parent=gene-AC57_RS18680;Dbxref=GenBank:WP_001090506.1;Name=WP_001090506.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309043.1;locus_tag=AC57_RS18680;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090506.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 49388 50179 . - . ID=gene-AC57_RS18675;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AC57_RS18675;old_locus_tag=AC57_0955 NZ_JJLR01000039.1 Protein Homology CDS 49388 50179 . - 0 ID=cds-WP_000235203.1;Parent=gene-AC57_RS18675;Dbxref=GenBank:WP_000235203.1;Name=WP_000235203.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AC57_RS18675;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235203.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 50190 51335 . - . ID=gene-AC57_RS18670;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AC57_RS18670;old_locus_tag=AC57_0956 NZ_JJLR01000039.1 Protein Homology CDS 50190 51335 . - 0 ID=cds-WP_000056007.1;Parent=gene-AC57_RS18670;Dbxref=GenBank:WP_000056007.1;Name=WP_000056007.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=AC57_RS18670;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_000056007.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 51332 52291 . - . ID=gene-AC57_RS18665;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AC57_RS18665;old_locus_tag=AC57_0957 NZ_JJLR01000039.1 Protein Homology CDS 51332 52291 . - 0 ID=cds-WP_001244342.1;Parent=gene-AC57_RS18665;Dbxref=GenBank:WP_001244342.1;Name=WP_001244342.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309046.1;locus_tag=AC57_RS18665;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_001244342.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 52284 52859 . - . ID=gene-AC57_RS18660;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AC57_RS18660;old_locus_tag=AC57_0958 NZ_JJLR01000039.1 Protein Homology CDS 52284 52859 . - 0 ID=cds-WP_032237495.1;Parent=gene-AC57_RS18660;Dbxref=GenBank:WP_032237495.1;Name=WP_032237495.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415457.1;locus_tag=AC57_RS18660;product=NADPH-dependent FMN reductase;protein_id=WP_032237495.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 53215 53754 . + . ID=gene-AC57_RS18655;Name=elfA;gbkey=Gene;gene=elfA;gene_biotype=protein_coding;locus_tag=AC57_RS18655;old_locus_tag=AC57_0959 NZ_JJLR01000039.1 Protein Homology CDS 53215 53754 . + 0 ID=cds-WP_000750304.1;Parent=gene-AC57_RS18655;Dbxref=GenBank:WP_000750304.1;Name=WP_000750304.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AC57_RS18655;product=fimbrial protein;protein_id=WP_000750304.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 53837 54538 . + . ID=gene-AC57_RS18650;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=AC57_RS18650;old_locus_tag=AC57_0960 NZ_JJLR01000039.1 Protein Homology CDS 53837 54538 . + 0 ID=cds-WP_016242023.1;Parent=gene-AC57_RS18650;Dbxref=GenBank:WP_016242023.1;Name=WP_016242023.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AC57_RS18650;product=fimbrial biogenesis chaperone;protein_id=WP_016242023.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 54563 57163 . + . ID=gene-AC57_RS18645;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AC57_RS18645;old_locus_tag=AC57_0961 NZ_JJLR01000039.1 Protein Homology CDS 54563 57163 . + 0 ID=cds-WP_000286333.1;Parent=gene-AC57_RS18645;Dbxref=GenBank:WP_000286333.1;Name=WP_000286333.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415460.1;locus_tag=AC57_RS18645;product=fimbrial biogenesis usher protein;protein_id=WP_000286333.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 57154 58224 . + . ID=gene-AC57_RS18640;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=AC57_RS18640;old_locus_tag=AC57_0962 NZ_JJLR01000039.1 Protein Homology CDS 57154 58224 . + 0 ID=cds-WP_001165668.1;Parent=gene-AC57_RS18640;Dbxref=GenBank:WP_001165668.1;Name=WP_001165668.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AC57_RS18640;product=fimbrial protein;protein_id=WP_001165668.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 58236 58778 . + . ID=gene-AC57_RS18635;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=AC57_RS18635;old_locus_tag=AC57_0963 NZ_JJLR01000039.1 Protein Homology CDS 58236 58778 . + 0 ID=cds-WP_000730614.1;Parent=gene-AC57_RS18635;Dbxref=GenBank:WP_000730614.1;Name=WP_000730614.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AC57_RS18635;product=fimbrial protein;protein_id=WP_000730614.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 58786 59301 . + . ID=gene-AC57_RS18630;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AC57_RS18630;old_locus_tag=AC57_0964 NZ_JJLR01000039.1 Protein Homology CDS 58786 59301 . + 0 ID=cds-WP_000919497.1;Parent=gene-AC57_RS18630;Dbxref=GenBank:WP_000919497.1;Name=WP_000919497.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415463.2;locus_tag=AC57_RS18630;product=fimbrial protein;protein_id=WP_000919497.1;transl_table=11 NZ_JJLR01000039.1 RefSeq pseudogene 59267 60004 . + . ID=gene-AC57_RS0123410;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=pseudogene;locus_tag=AC57_RS0123410;pseudo=true NZ_JJLR01000039.1 Protein Homology CDS 59267 60004 . + 0 ID=cds-AC57_RS0123410;Parent=gene-AC57_RS0123410;Note=internal stop;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AC57_RS0123410;product=fimbrial chaperone;pseudo=true;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 60115 61125 . + . ID=gene-AC57_RS18625;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AC57_RS18625;old_locus_tag=AC57_0967 NZ_JJLR01000039.1 Protein Homology CDS 60115 61125 . + 0 ID=cds-WP_001295352.1;Parent=gene-AC57_RS18625;Dbxref=GenBank:WP_001295352.1;Name=WP_001295352.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AC57_RS18625;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001295352.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 61299 61841 . + . ID=gene-AC57_RS18620;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AC57_RS18620;old_locus_tag=AC57_0968 NZ_JJLR01000039.1 Protein Homology CDS 61299 61841 . + 0 ID=cds-WP_032237235.1;Parent=gene-AC57_RS18620;Dbxref=GenBank:WP_032237235.1;Name=WP_032237235.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AC57_RS18620;product=cell division protein ZapC;protein_id=WP_032237235.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 61838 62947 . - . ID=gene-AC57_RS18615;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AC57_RS18615;old_locus_tag=AC57_0969 NZ_JJLR01000039.1 Protein Homology CDS 61838 62947 . - 0 ID=cds-WP_001619284.1;Parent=gene-AC57_RS18615;Dbxref=GenBank:WP_001619284.1;Name=WP_001619284.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706870.1;locus_tag=AC57_RS18615;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_001619284.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 63191 65299 . + . ID=gene-AC57_RS18610;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AC57_RS18610;old_locus_tag=AC57_0970 NZ_JJLR01000039.1 Protein Homology CDS 63191 65299 . + 0 ID=cds-WP_001086539.1;Parent=gene-AC57_RS18610;Dbxref=GenBank:WP_001086539.1;Name=WP_001086539.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415468.1;locus_tag=AC57_RS18610;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_001086539.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 65311 67218 . + . ID=gene-AC57_RS18605;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AC57_RS18605;old_locus_tag=AC57_0971 NZ_JJLR01000039.1 Protein Homology CDS 65311 67218 . + 0 ID=cds-WP_000053099.1;Parent=gene-AC57_RS18605;Dbxref=GenBank:WP_000053099.1;Name=WP_000053099.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415469.1;locus_tag=AC57_RS18605;product=ABC transporter ATP-binding protein;protein_id=WP_000053099.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 67348 68601 . + . ID=gene-AC57_RS18600;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AC57_RS18600;old_locus_tag=AC57_0972 NZ_JJLR01000039.1 Protein Homology CDS 67348 68601 . + 0 ID=cds-WP_000333176.1;Parent=gene-AC57_RS18600;Dbxref=GenBank:WP_000333176.1;Name=WP_000333176.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415470.1;locus_tag=AC57_RS18600;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_000333176.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 68606 70246 . + . ID=gene-AC57_RS18595;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AC57_RS18595;old_locus_tag=AC57_0973 NZ_JJLR01000039.1 Protein Homology CDS 68606 70246 . + 0 ID=cds-WP_032237238.1;Parent=gene-AC57_RS18595;Dbxref=GenBank:WP_032237238.1;Name=WP_032237238.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415471.1;locus_tag=AC57_RS18595;product=intermembrane transport protein PqiB;protein_id=WP_032237238.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 70243 70806 . + . ID=gene-AC57_RS18590;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AC57_RS18590;old_locus_tag=AC57_0974 NZ_JJLR01000039.1 Protein Homology CDS 70243 70806 . + 0 ID=cds-WP_000759118.1;Parent=gene-AC57_RS18590;Dbxref=GenBank:WP_000759118.1;Name=WP_000759118.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706875.1;locus_tag=AC57_RS18590;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759118.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 71062 71229 . + . ID=gene-AC57_RS0123415;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AC57_RS0123415 NZ_JJLR01000039.1 Protein Homology CDS 71062 71229 . + 0 ID=cds-WP_000828648.1;Parent=gene-AC57_RS0123415;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AC57_RS0123415;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 71299 71817 . - . ID=gene-AC57_RS18585;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AC57_RS18585;old_locus_tag=AC57_0975 NZ_JJLR01000039.1 Protein Homology CDS 71299 71817 . - 0 ID=cds-WP_000227927.1;Parent=gene-AC57_RS18585;Dbxref=GenBank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AC57_RS18585;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 71886 73646 . - . ID=gene-AC57_RS18580;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AC57_RS18580;old_locus_tag=AC57_0976 NZ_JJLR01000039.1 Protein Homology CDS 71886 73646 . - 0 ID=cds-WP_032279471.1;Parent=gene-AC57_RS18580;Dbxref=GenBank:WP_032279471.1;Name=WP_032279471.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415475.1;locus_tag=AC57_RS18580;product=AAA family ATPase;protein_id=WP_032279471.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 73832 74284 . + . ID=gene-AC57_RS18575;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AC57_RS18575;old_locus_tag=AC57_0977 NZ_JJLR01000039.1 Protein Homology CDS 73832 74284 . + 0 ID=cds-WP_000877161.1;Parent=gene-AC57_RS18575;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AC57_RS18575;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 74360 75400 . - . ID=gene-AC57_RS18570;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AC57_RS18570;old_locus_tag=AC57_0978 NZ_JJLR01000039.1 Protein Homology CDS 74360 75400 . - 0 ID=cds-WP_000750416.1;Parent=gene-AC57_RS18570;Dbxref=GenBank:WP_000750416.1;Name=WP_000750416.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=AC57_RS18570;product=porin OmpA;protein_id=WP_000750416.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 75757 76266 . - . ID=gene-AC57_RS18565;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AC57_RS18565;old_locus_tag=AC57_0979 NZ_JJLR01000039.1 Protein Homology CDS 75757 76266 . - 0 ID=cds-WP_000288710.1;Parent=gene-AC57_RS18565;Dbxref=GenBank:WP_000288710.1;Name=WP_000288710.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AC57_RS18565;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288710.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 76485 77114 . + . ID=gene-AC57_RS18560;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AC57_RS18560;old_locus_tag=AC57_0980 NZ_JJLR01000039.1 Protein Homology CDS 76485 77114 . + 0 ID=cds-WP_000839153.1;Parent=gene-AC57_RS18560;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AC57_RS18560;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 77077 79239 . - . ID=gene-AC57_RS18555;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AC57_RS18555;old_locus_tag=AC57_0981 NZ_JJLR01000039.1 Protein Homology CDS 77077 79239 . - 0 ID=cds-WP_000875061.1;Parent=gene-AC57_RS18555;Dbxref=GenBank:WP_000875061.1;Name=WP_000875061.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AC57_RS18555;product=YccS family putative transporter;protein_id=WP_000875061.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 79249 79695 . - . ID=gene-AC57_RS18550;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AC57_RS18550;old_locus_tag=AC57_0982 NZ_JJLR01000039.1 Protein Homology CDS 79249 79695 . - 0 ID=cds-WP_001261235.1;Parent=gene-AC57_RS18550;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AC57_RS18550;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 79818 81872 . + . ID=gene-AC57_RS18545;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AC57_RS18545;old_locus_tag=AC57_0983 NZ_JJLR01000039.1 Protein Homology CDS 79818 81872 . + 0 ID=cds-WP_000420536.1;Parent=gene-AC57_RS18545;Dbxref=GenBank:WP_000420536.1;Name=WP_000420536.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AC57_RS18545;product=DNA helicase IV;protein_id=WP_000420536.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 81904 82362 . - . ID=gene-AC57_RS18540;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AC57_RS18540;old_locus_tag=AC57_0984 NZ_JJLR01000039.1 Protein Homology CDS 81904 82362 . - 0 ID=cds-WP_000424181.1;Parent=gene-AC57_RS18540;Dbxref=GenBank:WP_000424181.1;Name=WP_000424181.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AC57_RS18540;product=methylglyoxal synthase;protein_id=WP_000424181.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 82458 83120 . - . ID=gene-AC57_RS18535;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AC57_RS18535;old_locus_tag=AC57_0985 NZ_JJLR01000039.1 Protein Homology CDS 82458 83120 . - 0 ID=cds-WP_032237239.1;Parent=gene-AC57_RS18535;Dbxref=GenBank:WP_032237239.1;Name=WP_032237239.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AC57_RS18535;product=DUF2057 family protein;protein_id=WP_032237239.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 83293 83706 . + . ID=gene-AC57_RS18525;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AC57_RS18525;old_locus_tag=AC57_0987 NZ_JJLR01000039.1 Protein Homology CDS 83293 83706 . + 0 ID=cds-WP_001301418.1;Parent=gene-AC57_RS18525;Dbxref=GenBank:WP_001301418.1;Name=WP_001301418.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415485.4;locus_tag=AC57_RS18525;product=CoA-binding protein;protein_id=WP_001301418.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 83751 84068 . - . ID=gene-AC57_RS18520;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AC57_RS18520;old_locus_tag=AC57_0988 NZ_JJLR01000039.1 Protein Homology CDS 83751 84068 . - 0 ID=cds-WP_001295356.1;Parent=gene-AC57_RS18520;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AC57_RS18520;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 84126 85316 . - . ID=gene-AC57_RS18515;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AC57_RS18515;old_locus_tag=AC57_0989 NZ_JJLR01000039.1 Protein Homology CDS 84126 85316 . - 0 ID=cds-WP_000116297.1;Parent=gene-AC57_RS18515;Dbxref=GenBank:WP_000116297.1;Name=WP_000116297.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AC57_RS18515;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_000116297.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 85411 85689 . + . ID=gene-AC57_RS18510;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AC57_RS18510;old_locus_tag=AC57_0990 NZ_JJLR01000039.1 Protein Homology CDS 85411 85689 . + 0 ID=cds-WP_000048252.1;Parent=gene-AC57_RS18510;Dbxref=GenBank:WP_000048252.1;Name=WP_000048252.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AC57_RS18510;product=acylphosphatase;protein_id=WP_000048252.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 85686 86015 . - . ID=gene-AC57_RS18505;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AC57_RS18505;old_locus_tag=AC57_0991 NZ_JJLR01000039.1 Protein Homology CDS 85686 86015 . - 0 ID=cds-WP_000904442.1;Parent=gene-AC57_RS18505;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AC57_RS18505;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 86106 86765 . - . ID=gene-AC57_RS18500;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AC57_RS18500;old_locus_tag=AC57_0992 NZ_JJLR01000039.1 Protein Homology CDS 86106 86765 . - 0 ID=cds-WP_000375136.1;Parent=gene-AC57_RS18500;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AC57_RS18500;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 86972 87059 . - . ID=gene-AC57_RS18495;Name=AC57_RS18495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS18495;old_locus_tag=AC57_0993 NZ_JJLR01000039.1 tRNAscan-SE tRNA 86972 87059 . - . ID=rna-AC57_RS18495;Parent=gene-AC57_RS18495;anticodon=(pos:complement(87023..87025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS18495;product=tRNA-Ser NZ_JJLR01000039.1 tRNAscan-SE exon 86972 87059 . - . ID=exon-AC57_RS18495-1;Parent=rna-AC57_RS18495;anticodon=(pos:complement(87023..87025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS18495;product=tRNA-Ser NZ_JJLR01000039.1 RefSeq gene 87486 88604 . + . ID=gene-AC57_RS18490;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AC57_RS18490;old_locus_tag=AC57_0994 NZ_JJLR01000039.1 Protein Homology CDS 87486 88604 . + 0 ID=cds-WP_001058323.1;Parent=gene-AC57_RS18490;Dbxref=GenBank:WP_001058323.1;Name=WP_001058323.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AC57_RS18490;product=hydrogenase 1 small subunit;protein_id=WP_001058323.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 88601 90394 . + . ID=gene-AC57_RS18485;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AC57_RS18485;old_locus_tag=AC57_0995 NZ_JJLR01000039.1 Protein Homology CDS 88601 90394 . + 0 ID=cds-WP_000107384.1;Parent=gene-AC57_RS18485;Dbxref=GenBank:WP_000107384.1;Name=WP_000107384.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415492.1;locus_tag=AC57_RS18485;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107384.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 90413 91120 . + . ID=gene-AC57_RS18480;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AC57_RS18480;old_locus_tag=AC57_0996 NZ_JJLR01000039.1 Protein Homology CDS 90413 91120 . + 0 ID=cds-WP_001186424.1;Parent=gene-AC57_RS18480;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AC57_RS18480;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 91117 91704 . + . ID=gene-AC57_RS18475;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AC57_RS18475;old_locus_tag=AC57_0997 NZ_JJLR01000039.1 Protein Homology CDS 91117 91704 . + 0 ID=cds-WP_000003671.1;Parent=gene-AC57_RS18475;Dbxref=GenBank:WP_000003671.1;Name=WP_000003671.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415494.1;locus_tag=AC57_RS18475;product=hydrogenase 1 maturation protease;protein_id=WP_000003671.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 91701 92099 . + . ID=gene-AC57_RS18470;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AC57_RS18470;old_locus_tag=AC57_0998 NZ_JJLR01000039.1 Protein Homology CDS 91701 92099 . + 0 ID=cds-WP_032237240.1;Parent=gene-AC57_RS18470;Dbxref=GenBank:WP_032237240.1;Name=WP_032237240.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415495.1;locus_tag=AC57_RS18470;product=hydrogenase-1 operon protein HyaE;protein_id=WP_032237240.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 92096 92953 . + . ID=gene-AC57_RS18465;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AC57_RS18465;old_locus_tag=AC57_0999 NZ_JJLR01000039.1 Protein Homology CDS 92096 92953 . + 0 ID=cds-WP_000004899.1;Parent=gene-AC57_RS18465;Dbxref=GenBank:WP_000004899.1;Name=WP_000004899.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AC57_RS18465;product=hydrogenase expression/formation protein;protein_id=WP_000004899.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 93087 94631 . + . ID=gene-AC57_RS18460;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AC57_RS18460;old_locus_tag=AC57_1000 NZ_JJLR01000039.1 Protein Homology CDS 93087 94631 . + 0 ID=cds-WP_032237241.1;Parent=gene-AC57_RS18460;Dbxref=GenBank:WP_032237241.1;Name=WP_032237241.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415497.1;locus_tag=AC57_RS18460;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_032237241.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 94643 95779 . + . ID=gene-AC57_RS18455;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AC57_RS18455;old_locus_tag=AC57_1001 NZ_JJLR01000039.1 Protein Homology CDS 94643 95779 . + 0 ID=cds-WP_000460803.1;Parent=gene-AC57_RS18455;Dbxref=GenBank:WP_000460803.1;Name=WP_000460803.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415498.1;locus_tag=AC57_RS18455;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460803.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 95792 95884 . + . ID=gene-AC57_RS0123425;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AC57_RS0123425 NZ_JJLR01000039.1 Protein Homology CDS 95792 95884 . + 0 ID=cds-WP_000270305.1;Parent=gene-AC57_RS0123425;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AC57_RS0123425;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 95964 97262 . + . ID=gene-AC57_RS18450;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AC57_RS18450;old_locus_tag=AC57_1002 NZ_JJLR01000039.1 Protein Homology CDS 95964 97262 . + 0 ID=cds-WP_001300464.1;Parent=gene-AC57_RS18450;Dbxref=GenBank:WP_001300464.1;Name=WP_001300464.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AC57_RS18450;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_001300464.1;transl_table=11 NZ_JJLR01000039.1 RefSeq pseudogene 97377 99557 . - . ID=gene-AC57_RS0123430;Name=etk;gbkey=Gene;gene=etk;gene_biotype=pseudogene;locus_tag=AC57_RS0123430;pseudo=true NZ_JJLR01000039.1 Protein Homology CDS 97377 99557 . - 0 ID=cds-AC57_RS0123430;Parent=gene-AC57_RS0123430;Note=internal stop;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415501.1;locus_tag=AC57_RS0123430;product=tyrosine-protein kinase;pseudo=true;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 99577 100023 . - . ID=gene-AC57_RS18445;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AC57_RS18445;old_locus_tag=AC57_1005 NZ_JJLR01000039.1 Protein Homology CDS 99577 100023 . - 0 ID=cds-WP_000057871.1;Parent=gene-AC57_RS18445;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AC57_RS18445;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 100011 101150 . - . ID=gene-AC57_RS18440;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AC57_RS18440;old_locus_tag=AC57_1006 NZ_JJLR01000039.1 Protein Homology CDS 100011 101150 . - 0 ID=cds-WP_001295357.1;Parent=gene-AC57_RS18440;Dbxref=GenBank:WP_001295357.1;Name=WP_001295357.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AC57_RS18440;product=polysaccharide export protein;protein_id=WP_001295357.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 101196 103292 . - . ID=gene-AC57_RS18435;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AC57_RS18435;old_locus_tag=AC57_1007 NZ_JJLR01000039.1 Protein Homology CDS 101196 103292 . - 0 ID=cds-WP_000742329.1;Parent=gene-AC57_RS18435;Dbxref=GenBank:WP_000742329.1;Name=WP_000742329.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309167.1;locus_tag=AC57_RS18435;product=YjbH domain-containing protein;protein_id=WP_000742329.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 103292 104038 . - . ID=gene-AC57_RS18430;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AC57_RS18430;old_locus_tag=AC57_1008 NZ_JJLR01000039.1 Protein Homology CDS 103292 104038 . - 0 ID=cds-WP_001038079.1;Parent=gene-AC57_RS18430;Dbxref=GenBank:WP_001038079.1;Name=WP_001038079.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415505.1;locus_tag=AC57_RS18430;product=capsule biosynthesis GfcC family protein;protein_id=WP_001038079.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 104035 104679 . - . ID=gene-AC57_RS18425;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AC57_RS18425;old_locus_tag=AC57_1009 NZ_JJLR01000039.1 Protein Homology CDS 104035 104679 . - 0 ID=cds-WP_001247610.1;Parent=gene-AC57_RS18425;Dbxref=GenBank:WP_001247610.1;Name=WP_001247610.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415506.1;locus_tag=AC57_RS18425;product=lipoprotein GfcB;protein_id=WP_001247610.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 104786 105091 . - . ID=gene-AC57_RS18420;Name=AC57_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18420;old_locus_tag=AC57_1010 NZ_JJLR01000039.1 Protein Homology CDS 104786 105091 . - 0 ID=cds-WP_001424190.1;Parent=gene-AC57_RS18420;Dbxref=GenBank:WP_001424190.1;Name=WP_001424190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001424190.1;locus_tag=AC57_RS18420;product=hypothetical protein;protein_id=WP_001424190.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 105534 105746 . - . ID=gene-AC57_RS18415;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AC57_RS18415;old_locus_tag=AC57_1011 NZ_JJLR01000039.1 Protein Homology CDS 105534 105746 . - 0 ID=cds-WP_000087763.1;Parent=gene-AC57_RS18415;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AC57_RS18415;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 106032 106244 . + . ID=gene-AC57_RS18410;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AC57_RS18410;old_locus_tag=AC57_1012 NZ_JJLR01000039.1 Protein Homology CDS 106032 106244 . + 0 ID=cds-WP_000066490.1;Parent=gene-AC57_RS18410;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AC57_RS18410;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 106255 106443 . + . ID=gene-AC57_RS26770;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AC57_RS26770 NZ_JJLR01000039.1 Protein Homology CDS 106255 106443 . + 0 ID=cds-WP_071524879.1;Parent=gene-AC57_RS26770;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AC57_RS26770;product=cold shock small protein YmcF;protein_id=WP_071524879.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 106418 106648 . + . ID=gene-AC57_RS0123435;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AC57_RS0123435 NZ_JJLR01000039.1 Protein Homology CDS 106418 106648 . + 0 ID=cds-WP_001309400.1;Parent=gene-AC57_RS0123435;Dbxref=GenBank:WP_001309400.1;Name=WP_001309400.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415511.1;locus_tag=AC57_RS0123435;product=protein YmcE;protein_id=WP_001309400.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 106638 106811 . + . ID=gene-AC57_RS18405;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AC57_RS18405;old_locus_tag=AC57_1013 NZ_JJLR01000039.1 Protein Homology CDS 106638 106811 . + 0 ID=cds-WP_001019197.1;Parent=gene-AC57_RS18405;Dbxref=GenBank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AC57_RS18405;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019197.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 106859 107932 . - . ID=gene-AC57_RS18400;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AC57_RS18400;old_locus_tag=AC57_1014 NZ_JJLR01000039.1 Protein Homology CDS 106859 107932 . - 0 ID=cds-WP_000829661.1;Parent=gene-AC57_RS18400;Dbxref=GenBank:WP_000829661.1;Name=WP_000829661.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415512.1;locus_tag=AC57_RS18400;product=4Fe-4S binding protein;protein_id=WP_000829661.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 108004 110748 . - . ID=gene-AC57_RS18395;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AC57_RS18395;old_locus_tag=AC57_1015 NZ_JJLR01000039.1 Protein Homology CDS 108004 110748 . - 0 ID=cds-WP_071999862.1;Parent=gene-AC57_RS18395;Dbxref=GenBank:WP_071999862.1;Name=WP_071999862.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AC57_RS18395;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_071999862.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 110831 111859 . + . ID=gene-AC57_RS18390;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AC57_RS18390;old_locus_tag=AC57_1016 NZ_JJLR01000039.1 Protein Homology CDS 110831 111859 . + 0 ID=cds-WP_001264933.1;Parent=gene-AC57_RS18390;Dbxref=GenBank:WP_001264933.1;Name=WP_001264933.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415514.1;locus_tag=AC57_RS18390;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_001264933.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 111832 112524 . - . ID=gene-AC57_RS18385;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AC57_RS18385;old_locus_tag=AC57_1017 NZ_JJLR01000039.1 Protein Homology CDS 111832 112524 . - 0 ID=cds-WP_001120125.1;Parent=gene-AC57_RS18385;Dbxref=GenBank:WP_001120125.1;Name=WP_001120125.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415515.1;locus_tag=AC57_RS18385;product=two-component system response regulator TorR;protein_id=WP_001120125.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 112654 113826 . + . ID=gene-AC57_RS18380;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AC57_RS18380;old_locus_tag=AC57_1018 NZ_JJLR01000039.1 Protein Homology CDS 112654 113826 . + 0 ID=cds-WP_032169882.1;Parent=gene-AC57_RS18380;Dbxref=GenBank:WP_032169882.1;Name=WP_032169882.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415516.1;locus_tag=AC57_RS18380;product=pentaheme c-type cytochrome TorC;protein_id=WP_032169882.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 113826 116372 . + . ID=gene-AC57_RS18375;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AC57_RS18375;old_locus_tag=AC57_1019 NZ_JJLR01000039.1 Protein Homology CDS 113826 116372 . + 0 ID=cds-WP_032279475.1;Parent=gene-AC57_RS18375;Dbxref=GenBank:WP_032279475.1;Name=WP_032279475.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415517.1;locus_tag=AC57_RS18375;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_032279475.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 116369 116968 . + . ID=gene-AC57_RS18370;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AC57_RS18370;old_locus_tag=AC57_1020 NZ_JJLR01000039.1 Protein Homology CDS 116369 116968 . + 0 ID=cds-WP_000209894.1;Parent=gene-AC57_RS18370;Dbxref=GenBank:WP_000209894.1;Name=WP_000209894.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415518.1;locus_tag=AC57_RS18370;product=molecular chaperone TorD;protein_id=WP_000209894.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 117120 117425 . - . ID=gene-AC57_RS18365;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AC57_RS18365;old_locus_tag=AC57_1021 NZ_JJLR01000039.1 Protein Homology CDS 117120 117425 . - 0 ID=cds-WP_000024560.1;Parent=gene-AC57_RS18365;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AC57_RS18365;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 117425 118345 . - . ID=gene-AC57_RS18360;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AC57_RS18360;old_locus_tag=AC57_1022 NZ_JJLR01000039.1 Protein Homology CDS 117425 118345 . - 0 ID=cds-WP_000420621.1;Parent=gene-AC57_RS18360;Dbxref=GenBank:WP_000420621.1;Name=WP_000420621.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AC57_RS18360;product=curved DNA-binding protein;protein_id=WP_000420621.1;transl_table=11 NZ_JJLR01000039.1 RefSeq gene 118632 118880 . - . ID=gene-AC57_RS18355;Name=AC57_RS18355;end_range=118880,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18355;old_locus_tag=AC57_1023;partial=true NZ_JJLR01000039.1 Protein Homology CDS 118632 118880 . - 0 ID=cds-WP_000674744.1-3;Parent=gene-AC57_RS18355;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=118880,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS18355;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;transl_table=11 ##sequence-region NZ_JJLR01000040.1 1 23019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000040.1 RefSeq region 1 23019 . + . ID=NZ_JJLR01000040.1:1..23019;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000040.1 RefSeq gene 1 237 . - . ID=gene-AC57_RS0123440;Name=AC57_RS0123440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123440;old_locus_tag=AC57_1024;partial=true;start_range=.,1 NZ_JJLR01000040.1 Protein Homology CDS 1 237 . - 0 ID=cds-WP_000179207.1-3;Parent=gene-AC57_RS0123440;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123440;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;start_range=.,1;transl_table=11 NZ_JJLR01000040.1 RefSeq pseudogene 279 1546 . + . ID=gene-AC57_RS0123445;Name=yccE;gbkey=Gene;gene=yccE;gene_biotype=pseudogene;locus_tag=AC57_RS0123445;pseudo=true NZ_JJLR01000040.1 Protein Homology CDS 279 1546 . + 0 ID=cds-AC57_RS0123445;Parent=gene-AC57_RS0123445;Note=frameshifted;gbkey=CDS;gene=yccE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415521.1;locus_tag=AC57_RS0123445;product=YccE family protein;pseudo=true;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 1839 3080 . + . ID=gene-AC57_RS18350;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AC57_RS18350;old_locus_tag=AC57_1027 NZ_JJLR01000040.1 Protein Homology CDS 1839 3080 . + 0 ID=cds-WP_001044279.1;Parent=gene-AC57_RS18350;Dbxref=GenBank:WP_001044279.1;Name=WP_001044279.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AC57_RS18350;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_001044279.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 3120 3347 . - . ID=gene-AC57_RS18345;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AC57_RS18345;old_locus_tag=AC57_1028 NZ_JJLR01000040.1 Protein Homology CDS 3120 3347 . - 0 ID=cds-WP_001143120.1;Parent=gene-AC57_RS18345;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AC57_RS18345;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 3368 3964 . - . ID=gene-AC57_RS18340;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AC57_RS18340;old_locus_tag=AC57_1029 NZ_JJLR01000040.1 Protein Homology CDS 3368 3964 . - 0 ID=cds-WP_032237244.1;Parent=gene-AC57_RS18340;Dbxref=GenBank:WP_032237244.1;Name=WP_032237244.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AC57_RS18340;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_032237244.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 4337 4510 . + . ID=gene-AC57_RS0123455;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AC57_RS0123455;old_locus_tag=AC57_1030 NZ_JJLR01000040.1 Protein Homology CDS 4337 4510 . + 0 ID=cds-WP_001273658.1;Parent=gene-AC57_RS0123455;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AC57_RS0123455;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 4768 6096 . - . ID=gene-AC57_RS18335;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AC57_RS18335;old_locus_tag=AC57_1031 NZ_JJLR01000040.1 Protein Homology CDS 4768 6096 . - 0 ID=cds-WP_001459639.1;Parent=gene-AC57_RS18335;Dbxref=GenBank:WP_001459639.1;Name=WP_001459639.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415526.4;locus_tag=AC57_RS18335;product=pyrimidine utilization transport protein G;protein_id=WP_001459639.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 6117 6611 . - . ID=gene-AC57_RS18330;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AC57_RS18330;old_locus_tag=AC57_1032 NZ_JJLR01000040.1 Protein Homology CDS 6117 6611 . - 0 ID=cds-WP_001028095.1;Parent=gene-AC57_RS18330;Dbxref=GenBank:WP_001028095.1;Name=WP_001028095.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309280.2;locus_tag=AC57_RS18330;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028095.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 6622 7212 . - . ID=gene-AC57_RS18325;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=protein_coding;locus_tag=AC57_RS18325;old_locus_tag=AC57_1033 NZ_JJLR01000040.1 Protein Homology CDS 6622 7212 . - 0 ID=cds-WP_001001185.1;Parent=gene-AC57_RS18325;Dbxref=GenBank:WP_001001185.1;Name=WP_001001185.1;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706930.1;locus_tag=AC57_RS18325;product=malonic semialdehyde reductase;protein_id=WP_001001185.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 7222 8022 . - . ID=gene-AC57_RS18320;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AC57_RS18320;old_locus_tag=AC57_1034 NZ_JJLR01000040.1 Protein Homology CDS 7222 8022 . - 0 ID=cds-WP_001459640.1;Parent=gene-AC57_RS18320;Dbxref=GenBank:WP_001459640.1;Name=WP_001459640.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309282.1;locus_tag=AC57_RS18320;product=pyrimidine utilization protein D;protein_id=WP_001459640.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 8030 8416 . - . ID=gene-AC57_RS18315;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AC57_RS18315;old_locus_tag=AC57_1035 NZ_JJLR01000040.1 Protein Homology CDS 8030 8416 . - 0 ID=cds-WP_032285659.1;Parent=gene-AC57_RS18315;Dbxref=GenBank:WP_032285659.1;Name=WP_032285659.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AC57_RS18315;product=3-aminoacrylate deaminase;protein_id=WP_032285659.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 8428 9120 . - . ID=gene-AC57_RS18310;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AC57_RS18310;old_locus_tag=AC57_1036 NZ_JJLR01000040.1 Protein Homology CDS 8428 9120 . - 0 ID=cds-WP_001307708.1;Parent=gene-AC57_RS18310;Dbxref=GenBank:WP_001307708.1;Name=WP_001307708.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AC57_RS18310;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_001307708.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 9120 10211 . - . ID=gene-AC57_RS18305;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AC57_RS18305;old_locus_tag=AC57_1037 NZ_JJLR01000040.1 Protein Homology CDS 9120 10211 . - 0 ID=cds-WP_021546859.1;Parent=gene-AC57_RS18305;Dbxref=GenBank:WP_021546859.1;Name=WP_021546859.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AC57_RS18305;product=pyrimidine utilization protein A;protein_id=WP_021546859.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 10499 11137 . + . ID=gene-AC57_RS18300;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AC57_RS18300;old_locus_tag=AC57_1038 NZ_JJLR01000040.1 Protein Homology CDS 10499 11137 . + 0 ID=cds-WP_000191700.1;Parent=gene-AC57_RS18300;Dbxref=GenBank:WP_000191700.1;Name=WP_000191700.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AC57_RS18300;product=HTH-type transcriptional regulator RutR;protein_id=WP_000191700.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 11177 15139 . - . ID=gene-AC57_RS18295;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AC57_RS18295;old_locus_tag=AC57_1039 NZ_JJLR01000040.1 Protein Homology CDS 11177 15139 . - 0 ID=cds-WP_001424200.1;Parent=gene-AC57_RS18295;Dbxref=GenBank:WP_001424200.1;Name=WP_001424200.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=AC57_RS18295;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_001424200.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 15194 15403 . + . ID=gene-AC57_RS0123460;Name=AC57_RS0123460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123460;old_locus_tag=AC57_1040 NZ_JJLR01000040.1 GeneMarkS-2+ CDS 15194 15403 . + 0 ID=cds-WP_000979516.1;Parent=gene-AC57_RS0123460;Dbxref=GenBank:WP_000979516.1;Name=WP_000979516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0123460;product=hypothetical protein;protein_id=WP_000979516.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 15562 17070 . + . ID=gene-AC57_RS18290;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AC57_RS18290;old_locus_tag=AC57_1042 NZ_JJLR01000040.1 Protein Homology CDS 15562 17070 . + 0 ID=cds-WP_001018489.1;Parent=gene-AC57_RS18290;Dbxref=GenBank:WP_001018489.1;Name=WP_001018489.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415535.1;locus_tag=AC57_RS18290;product=sodium/proline symporter PutP;protein_id=WP_001018489.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 17612 18442 . + . ID=gene-AC57_RS18285;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AC57_RS18285;old_locus_tag=AC57_1043 NZ_JJLR01000040.1 Protein Homology CDS 17612 18442 . + 0 ID=cds-WP_032237245.1;Parent=gene-AC57_RS18285;Dbxref=GenBank:WP_032237245.1;Name=WP_032237245.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AC57_RS18285;product=iron uptake transporter permease EfeU;protein_id=WP_032237245.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 18500 19627 . + . ID=gene-AC57_RS18280;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AC57_RS18280;old_locus_tag=AC57_1044 NZ_JJLR01000040.1 Protein Homology CDS 18500 19627 . + 0 ID=cds-WP_000154394.1;Parent=gene-AC57_RS18280;Dbxref=GenBank:WP_000154394.1;Name=WP_000154394.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309291.1;locus_tag=AC57_RS18280;product=iron uptake system protein EfeO;protein_id=WP_000154394.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 19633 20904 . + . ID=gene-AC57_RS18275;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AC57_RS18275;old_locus_tag=AC57_1045 NZ_JJLR01000040.1 Protein Homology CDS 19633 20904 . + 0 ID=cds-WP_001199463.1;Parent=gene-AC57_RS18275;Dbxref=GenBank:WP_001199463.1;Name=WP_001199463.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415538.1;locus_tag=AC57_RS18275;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_001199463.1;transl_table=11 NZ_JJLR01000040.1 RefSeq gene 21525 22313 . + . ID=gene-AC57_RS18270;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AC57_RS18270;old_locus_tag=AC57_1046 NZ_JJLR01000040.1 Protein Homology CDS 21525 22313 . + 0 ID=cds-WP_000533534.1;Parent=gene-AC57_RS18270;Dbxref=GenBank:WP_000533534.1;Name=WP_000533534.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AC57_RS18270;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533534.1;transl_table=11 NZ_JJLR01000040.1 RefSeq pseudogene 22748 23019 . + . ID=gene-AC57_RS18265;Name=AC57_RS18265;end_range=23019,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS18265;old_locus_tag=AC57_1048;partial=true;pseudo=true NZ_JJLR01000040.1 Protein Homology CDS 22748 23019 . + 0 ID=cds-AC57_RS18265;Parent=gene-AC57_RS18265;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=23019,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS18265;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000041.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000041.1 RefSeq region 1 2047 . + . ID=NZ_JJLR01000041.1:1..2047;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000041.1 RefSeq gene 203 889 . + . ID=gene-AC57_RS0123475;Name=AC57_RS0123475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123475;old_locus_tag=AC57_1049 NZ_JJLR01000041.1 Protein Homology CDS 203 889 . + 0 ID=cds-WP_000009225.1;Parent=gene-AC57_RS0123475;Dbxref=GenBank:WP_000009225.1;Name=WP_000009225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232851.1;locus_tag=AC57_RS0123475;product=DUF2726 domain-containing protein;protein_id=WP_000009225.1;transl_table=11 NZ_JJLR01000041.1 RefSeq gene 1336 2047 . + . ID=gene-AC57_RS18260;Name=AC57_RS18260;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18260;old_locus_tag=AC57_1050;partial=true NZ_JJLR01000041.1 Protein Homology CDS 1336 2047 . + 0 ID=cds-WP_032285660.1;Parent=gene-AC57_RS18260;Dbxref=GenBank:WP_032285660.1;Name=WP_032285660.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=2047,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=AC57_RS18260;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_032285660.1;transl_table=11 ##sequence-region NZ_JJLR01000042.1 1 18780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000042.1 RefSeq region 1 18780 . + . ID=NZ_JJLR01000042.1:1..18780;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000042.1 RefSeq pseudogene 1 301 . + . ID=gene-AC57_RS18255;Name=AC57_RS18255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS18255;old_locus_tag=AC57_1051;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000042.1 Protein Homology CDS 1 301 . + 1 ID=cds-AC57_RS18255;Parent=gene-AC57_RS18255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS18255;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 449 1321 . + . ID=gene-AC57_RS18250;Name=AC57_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18250;old_locus_tag=AC57_1052 NZ_JJLR01000042.1 Protein Homology CDS 449 1321 . + 0 ID=cds-WP_001069768.1;Parent=gene-AC57_RS18250;Dbxref=GenBank:WP_001069768.1;Name=WP_001069768.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AC57_RS18250;product=GTPase family protein;protein_id=WP_001069768.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 1693 4542 . + . ID=gene-AC57_RS18245;Name=cah;gbkey=Gene;gene=cah;gene_biotype=protein_coding;locus_tag=AC57_RS18245;old_locus_tag=AC57_1054 NZ_JJLR01000042.1 Protein Homology CDS 1693 4542 . + 0 ID=cds-WP_032237177.1;Parent=gene-AC57_RS18245;Dbxref=GenBank:WP_032237177.1;Name=WP_032237177.1;gbkey=CDS;gene=cah;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AC57_RS18245;product=calcium-binding autotransporter Cah;protein_id=WP_032237177.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 4653 7037 . + . ID=gene-AC57_RS18240;Name=AC57_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18240;old_locus_tag=AC57_1055 NZ_JJLR01000042.1 Protein Homology CDS 4653 7037 . + 0 ID=cds-WP_021528116.1;Parent=gene-AC57_RS18240;Dbxref=GenBank:WP_021528116.1;Name=WP_021528116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309424.1;locus_tag=AC57_RS18240;product=dynamin family protein;protein_id=WP_021528116.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 7034 7939 . + . ID=gene-AC57_RS18235;Name=AC57_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18235;old_locus_tag=AC57_1056 NZ_JJLR01000042.1 Protein Homology CDS 7034 7939 . + 0 ID=cds-WP_032237176.1;Parent=gene-AC57_RS18235;Dbxref=GenBank:WP_032237176.1;Name=WP_032237176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309425.1;locus_tag=AC57_RS18235;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_032237176.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 7936 9006 . + . ID=gene-AC57_RS18230;Name=AC57_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18230;old_locus_tag=AC57_1057 NZ_JJLR01000042.1 Protein Homology CDS 7936 9006 . + 0 ID=cds-WP_032234084.1;Parent=gene-AC57_RS18230;Dbxref=GenBank:WP_032234084.1;Name=WP_032234084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309426.1;locus_tag=AC57_RS18230;product=patatin-like phospholipase family protein;protein_id=WP_032234084.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 9111 9275 . - . ID=gene-AC57_RS30195;Name=AC57_RS30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30195;old_locus_tag=AC57_1058 NZ_JJLR01000042.1 Protein Homology CDS 9111 9275 . - 0 ID=cds-WP_000504322.1;Parent=gene-AC57_RS30195;Dbxref=GenBank:WP_000504322.1;Name=WP_000504322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001386164.1;locus_tag=AC57_RS30195;product=hypothetical protein;protein_id=WP_000504322.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 9346 10164 . + . ID=gene-AC57_RS18220;Name=AC57_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18220;old_locus_tag=AC57_1059 NZ_JJLR01000042.1 Protein Homology CDS 9346 10164 . + 0 ID=cds-WP_001234682.1;Parent=gene-AC57_RS18220;Dbxref=GenBank:WP_001234682.1;Name=WP_001234682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309428.1;locus_tag=AC57_RS18220;product=DUF932 domain-containing protein;protein_id=WP_001234682.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 10255 10740 . + . ID=gene-AC57_RS18215;Name=AC57_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18215;old_locus_tag=AC57_1060 NZ_JJLR01000042.1 Protein Homology CDS 10255 10740 . + 0 ID=cds-WP_000214398.1;Parent=gene-AC57_RS18215;Dbxref=GenBank:WP_000214398.1;Name=WP_000214398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AC57_RS18215;product=antirestriction protein;protein_id=WP_000214398.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 10756 11232 . + . ID=gene-AC57_RS18210;Name=AC57_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18210;old_locus_tag=AC57_1061 NZ_JJLR01000042.1 Protein Homology CDS 10756 11232 . + 0 ID=cds-WP_032237175.1;Parent=gene-AC57_RS18210;Dbxref=GenBank:WP_032237175.1;Name=WP_032237175.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AC57_RS18210;product=JAB domain-containing protein;protein_id=WP_032237175.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 11295 11516 . + . ID=gene-AC57_RS18205;Name=AC57_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18205;old_locus_tag=AC57_1062 NZ_JJLR01000042.1 Protein Homology CDS 11295 11516 . + 0 ID=cds-WP_001220314.1;Parent=gene-AC57_RS18205;Dbxref=GenBank:WP_001220314.1;Name=WP_001220314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AC57_RS18205;product=DUF987 domain-containing protein;protein_id=WP_001220314.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 11679 12053 . + . ID=gene-AC57_RS0123480;Name=AC57_RS0123480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123480;old_locus_tag=AC57_1064 NZ_JJLR01000042.1 Protein Homology CDS 11679 12053 . + 0 ID=cds-WP_001280955.1;Parent=gene-AC57_RS0123480;Dbxref=GenBank:WP_001280955.1;Name=WP_001280955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309432.1;locus_tag=AC57_RS0123480;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001280955.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 12100 12474 . + . ID=gene-AC57_RS18195;Name=AC57_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18195;old_locus_tag=AC57_1065 NZ_JJLR01000042.1 Protein Homology CDS 12100 12474 . + 0 ID=cds-WP_000854914.1;Parent=gene-AC57_RS18195;Dbxref=GenBank:WP_000854914.1;Name=WP_000854914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AC57_RS18195;product=TA system toxin CbtA family protein;protein_id=WP_000854914.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 12471 12962 . + . ID=gene-AC57_RS18190;Name=AC57_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18190;old_locus_tag=AC57_1066 NZ_JJLR01000042.1 Protein Homology CDS 12471 12962 . + 0 ID=cds-WP_000976857.1;Parent=gene-AC57_RS18190;Dbxref=GenBank:WP_000976857.1;Name=WP_000976857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309434.3;locus_tag=AC57_RS18190;product=DUF5983 family protein;protein_id=WP_000976857.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 12974 13171 . + . ID=gene-AC57_RS18185;Name=AC57_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18185;old_locus_tag=AC57_1067 NZ_JJLR01000042.1 Protein Homology CDS 12974 13171 . + 0 ID=cds-WP_000839282.1;Parent=gene-AC57_RS18185;Dbxref=GenBank:WP_000839282.1;Name=WP_000839282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AC57_RS18185;product=DUF957 domain-containing protein;protein_id=WP_000839282.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 13256 14098 . + . ID=gene-AC57_RS18180;Name=AC57_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18180;old_locus_tag=AC57_1068 NZ_JJLR01000042.1 Protein Homology CDS 13256 14098 . + 0 ID=cds-WP_001280481.1;Parent=gene-AC57_RS18180;Dbxref=GenBank:WP_001280481.1;Name=WP_001280481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309436.1;locus_tag=AC57_RS18180;product=DUF4942 domain-containing protein;protein_id=WP_001280481.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 14248 14335 . - . ID=gene-AC57_RS18175;Name=AC57_RS18175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS18175;old_locus_tag=AC57_1069 NZ_JJLR01000042.1 tRNAscan-SE tRNA 14248 14335 . - . ID=rna-AC57_RS18175;Parent=gene-AC57_RS18175;anticodon=(pos:complement(14299..14301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS18175;product=tRNA-Ser NZ_JJLR01000042.1 tRNAscan-SE exon 14248 14335 . - . ID=exon-AC57_RS18175-1;Parent=rna-AC57_RS18175;anticodon=(pos:complement(14299..14301));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS18175;product=tRNA-Ser NZ_JJLR01000042.1 RefSeq pseudogene 14569 15507 . + . ID=gene-AC57_RS29680;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=pseudogene;locus_tag=AC57_RS29680;pseudo=true NZ_JJLR01000042.1 Protein Homology CDS 14569 15507 . + 0 ID=cds-AC57_RS29680;Parent=gene-AC57_RS29680;Note=internal stop;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AC57_RS29680;product=glyoxylate/hydroxypyruvate reductase GhrA;pseudo=true;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 15562 16299 . + . ID=gene-AC57_RS18170;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AC57_RS18170;old_locus_tag=AC57_1072 NZ_JJLR01000042.1 Protein Homology CDS 15562 16299 . + 0 ID=cds-WP_000283667.1;Parent=gene-AC57_RS18170;Dbxref=GenBank:WP_000283667.1;Name=WP_000283667.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415552.1;locus_tag=AC57_RS18170;product=zinc-binding phosphatase;protein_id=WP_000283667.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 16323 16877 . + . ID=gene-AC57_RS18165;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AC57_RS18165;old_locus_tag=AC57_1073 NZ_JJLR01000042.1 Protein Homology CDS 16323 16877 . + 0 ID=cds-WP_001001921.1;Parent=gene-AC57_RS18165;Dbxref=GenBank:WP_001001921.1;Name=WP_001001921.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=AC57_RS18165;product=molecular chaperone YcdY;protein_id=WP_001001921.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 16979 17470 . + . ID=gene-AC57_RS18160;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AC57_RS18160;old_locus_tag=AC57_1074 NZ_JJLR01000042.1 Protein Homology CDS 16979 17470 . + 0 ID=cds-WP_001297187.1;Parent=gene-AC57_RS18160;Dbxref=GenBank:WP_001297187.1;Name=WP_001297187.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AC57_RS18160;product=DUF1097 domain-containing protein;protein_id=WP_001297187.1;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 17534 18367 . - . ID=gene-AC57_RS18155;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AC57_RS18155;old_locus_tag=AC57_1075 NZ_JJLR01000042.1 Protein Homology CDS 17534 18367 . - 0 ID=cds-WP_001189321.1;Parent=gene-AC57_RS18155;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AC57_RS18155;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JJLR01000042.1 RefSeq pseudogene 18394 18537 . - . ID=gene-AC57_RS18150;Name=AC57_RS18150;end_range=18537,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS18150;old_locus_tag=AC57_1076;partial=true;pseudo=true NZ_JJLR01000042.1 Protein Homology CDS 18394 18537 . - 0 ID=cds-AC57_RS18150;Parent=gene-AC57_RS18150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=18537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AC57_RS18150;partial=true;product=curli assembly protein CsgF;pseudo=true;transl_table=11 NZ_JJLR01000042.1 RefSeq gene 18552 18780 . - . ID=gene-AC57_RS18145;Name=AC57_RS18145;end_range=18780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18145;old_locus_tag=AC57_1077;partial=true NZ_JJLR01000042.1 Protein Homology CDS 18552 18780 . - 1 ID=cds-WP_000385869.1;Parent=gene-AC57_RS18145;Dbxref=GenBank:WP_000385869.1;Name=WP_000385869.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=18780,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS18145;partial=true;product=IS1 family transposase;protein_id=WP_000385869.1;transl_table=11 ##sequence-region NZ_JJLR01000043.1 1 12440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000043.1 RefSeq region 1 12440 . + . ID=NZ_JJLR01000043.1:1..12440;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000043.1 RefSeq pseudogene 1 600 . - . ID=gene-AC57_RS0123490;Name=AC57_RS0123490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123490;old_locus_tag=AC57_1078;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000043.1 Protein Homology CDS 1 600 . - 0 ID=cds-AC57_RS0123490;Parent=gene-AC57_RS0123490;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC57_RS0123490;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000043.1 RefSeq pseudogene 656 738 . - . ID=gene-AC57_RS31185;Name=AC57_RS31185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31185;partial=true;pseudo=true;start_range=.,656 NZ_JJLR01000043.1 Protein Homology CDS 656 738 . - 0 ID=cds-AC57_RS31185;Parent=gene-AC57_RS31185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406625.1;locus_tag=AC57_RS31185;partial=true;product=CPBP family intramembrane glutamic endopeptidase;pseudo=true;start_range=.,656;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 838 1296 . - . ID=gene-AC57_RS18140;Name=AC57_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18140;old_locus_tag=AC57_1079 NZ_JJLR01000043.1 Protein Homology CDS 838 1296 . - 0 ID=cds-WP_001301456.1;Parent=gene-AC57_RS18140;Dbxref=GenBank:WP_001301456.1;Name=WP_001301456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309401.1;locus_tag=AC57_RS18140;product=hypothetical protein;protein_id=WP_001301456.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 1754 2263 . + . ID=gene-AC57_RS28785;Name=AC57_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28785 NZ_JJLR01000043.1 Protein Homology CDS 1754 2263 . + 0 ID=cds-WP_001167434.1;Parent=gene-AC57_RS28785;Dbxref=GenBank:WP_001167434.1;Name=WP_001167434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309403.1;locus_tag=AC57_RS28785;product=hypothetical protein;protein_id=WP_001167434.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 2352 2975 . + . ID=gene-AC57_RS18135;Name=AC57_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18135;old_locus_tag=AC57_1082 NZ_JJLR01000043.1 Protein Homology CDS 2352 2975 . + 0 ID=cds-WP_001260386.1;Parent=gene-AC57_RS18135;Dbxref=GenBank:WP_001260386.1;Name=WP_001260386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309404.1;locus_tag=AC57_RS18135;product=hypothetical protein;protein_id=WP_001260386.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 3071 3304 . + . ID=gene-AC57_RS18130;Name=AC57_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18130;old_locus_tag=AC57_1083 NZ_JJLR01000043.1 Protein Homology CDS 3071 3304 . + 0 ID=cds-WP_000124179.1;Parent=gene-AC57_RS18130;Dbxref=GenBank:WP_000124179.1;Name=WP_000124179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309405.1;locus_tag=AC57_RS18130;product=hypothetical protein;protein_id=WP_000124179.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 3357 3548 . - . ID=gene-AC57_RS18125;Name=AC57_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18125;old_locus_tag=AC57_1084 NZ_JJLR01000043.1 Protein Homology CDS 3357 3548 . - 0 ID=cds-WP_032237958.1;Parent=gene-AC57_RS18125;Dbxref=GenBank:WP_032237958.1;Name=WP_032237958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502604.1;locus_tag=AC57_RS18125;product=DUF4222 domain-containing protein;protein_id=WP_032237958.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 3970 4119 . + . ID=gene-AC57_RS30200;Name=AC57_RS30200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30200;old_locus_tag=AC57_1086 NZ_JJLR01000043.1 Protein Homology CDS 3970 4119 . + 0 ID=cds-WP_000590537.1;Parent=gene-AC57_RS30200;Dbxref=GenBank:WP_000590537.1;Name=WP_000590537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590537.1;locus_tag=AC57_RS30200;product=hypothetical protein;protein_id=WP_000590537.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 4223 5269 . + . ID=gene-AC57_RS18120;Name=AC57_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18120;old_locus_tag=AC57_1087 NZ_JJLR01000043.1 Protein Homology CDS 4223 5269 . + 0 ID=cds-WP_001335711.1;Parent=gene-AC57_RS18120;Dbxref=GenBank:WP_001335711.1;Name=WP_001335711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309409.2;locus_tag=AC57_RS18120;product=POTRA domain-containing protein;protein_id=WP_001335711.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 5510 8191 . + . ID=gene-AC57_RS18115;Name=AC57_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18115;old_locus_tag=AC57_1089 NZ_JJLR01000043.1 Protein Homology CDS 5510 8191 . + 0 ID=cds-WP_000256231.1;Parent=gene-AC57_RS18115;Dbxref=GenBank:WP_000256231.1;Name=WP_000256231.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536548.1;locus_tag=AC57_RS18115;product=AAA domain-containing protein;protein_id=WP_000256231.1;transl_table=11 NZ_JJLR01000043.1 RefSeq pseudogene 8692 9923 . + . ID=gene-AC57_RS0123520;Name=AC57_RS0123520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123520;old_locus_tag=AC57_1091;pseudo=true NZ_JJLR01000043.1 Protein Homology CDS 8692 9923 . + 0 ID=cds-AC57_RS0123520;Parent=gene-AC57_RS0123520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309413.1;locus_tag=AC57_RS0123520;product=phosphoadenosine phosphosulfate reductase;pseudo=true;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 9908 10546 . + . ID=gene-AC57_RS18110;Name=AC57_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18110;old_locus_tag=AC57_1093 NZ_JJLR01000043.1 Protein Homology CDS 9908 10546 . + 0 ID=cds-WP_000502842.1;Parent=gene-AC57_RS18110;Dbxref=GenBank:WP_000502842.1;Name=WP_000502842.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309414.1;locus_tag=AC57_RS18110;product=IbrB-like domain-containing protein;protein_id=WP_000502842.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 10625 10894 . + . ID=gene-AC57_RS18105;Name=AC57_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18105;old_locus_tag=AC57_1094 NZ_JJLR01000043.1 Protein Homology CDS 10625 10894 . + 0 ID=cds-WP_000226519.1;Parent=gene-AC57_RS18105;Dbxref=GenBank:WP_000226519.1;Name=WP_000226519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309415.1;locus_tag=AC57_RS18105;product=PerC family transcriptional regulator;protein_id=WP_000226519.1;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 10915 11559 . + . ID=gene-AC57_RS18100;Name=AC57_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS18100;old_locus_tag=AC57_1095 NZ_JJLR01000043.1 Protein Homology CDS 10915 11559 . + 0 ID=cds-WP_032234155.1;Parent=gene-AC57_RS18100;Dbxref=GenBank:WP_032234155.1;Name=WP_032234155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309416.1;locus_tag=AC57_RS18100;product=hypothetical protein;protein_id=WP_032234155.1;transl_table=11 NZ_JJLR01000043.1 RefSeq pseudogene 11875 12214 . + . ID=gene-AC57_RS18095;Name=AC57_RS18095;end_range=12214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS18095;old_locus_tag=AC57_1096;partial=true;pseudo=true NZ_JJLR01000043.1 Protein Homology CDS 11875 12214 . + 0 ID=cds-AC57_RS18095;Parent=gene-AC57_RS18095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347735.1;locus_tag=AC57_RS18095;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000043.1 RefSeq gene 12257 12440 . - . ID=gene-AC57_RS0123530;Name=AC57_RS0123530;end_range=12440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123530;old_locus_tag=AC57_1097;partial=true NZ_JJLR01000043.1 Protein Homology CDS 12257 12440 . - 1 ID=cds-WP_016230625.1;Parent=gene-AC57_RS0123530;Dbxref=GenBank:WP_016230625.1;Name=WP_016230625.1;Ontology_term=GO:0015074;end_range=12440,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS0123530;partial=true;product=IS3 family transposase;protein_id=WP_016230625.1;transl_table=11 ##sequence-region NZ_JJLR01000044.1 1 78298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000044.1 RefSeq region 1 78298 . + . ID=NZ_JJLR01000044.1:1..78298;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000044.1 RefSeq gene 1 233 . - . ID=gene-AC57_RS0123535;Name=AC57_RS0123535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123535;old_locus_tag=AC57_1098;partial=true;start_range=.,1 NZ_JJLR01000044.1 Protein Homology CDS 1 233 . - 0 ID=cds-WP_001397795.1;Parent=gene-AC57_RS0123535;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123535;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;start_range=.,1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 687 1142 . + . ID=gene-AC57_RS18085;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AC57_RS18085;old_locus_tag=AC57_1100 NZ_JJLR01000044.1 Protein Homology CDS 687 1142 . + 0 ID=cds-WP_032237174.1;Parent=gene-AC57_RS18085;Dbxref=GenBank:WP_032237174.1;Name=WP_032237174.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AC57_RS18085;product=curli minor subunit CsgB;protein_id=WP_032237174.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 1183 1638 . + . ID=gene-AC57_RS18080;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AC57_RS18080;old_locus_tag=AC57_1101 NZ_JJLR01000044.1 Protein Homology CDS 1183 1638 . + 0 ID=cds-WP_000771437.1;Parent=gene-AC57_RS18080;Dbxref=GenBank:WP_000771437.1;Name=WP_000771437.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415560.1;locus_tag=AC57_RS18080;product=curli major subunit CsgA;protein_id=WP_000771437.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 1697 2029 . + . ID=gene-AC57_RS18075;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AC57_RS18075;old_locus_tag=AC57_1102 NZ_JJLR01000044.1 Protein Homology CDS 1697 2029 . + 0 ID=cds-WP_032279553.1;Parent=gene-AC57_RS18075;Dbxref=GenBank:WP_032279553.1;Name=WP_032279553.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415561.1;locus_tag=AC57_RS18075;product=curli assembly chaperone CsgC;protein_id=WP_032279553.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 2150 2461 . + . ID=gene-AC57_RS18070;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AC57_RS18070;old_locus_tag=AC57_1103 NZ_JJLR01000044.1 Protein Homology CDS 2150 2461 . + 0 ID=cds-WP_000489587.1;Parent=gene-AC57_RS18070;Dbxref=GenBank:WP_000489587.1;Name=WP_000489587.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415562.1;locus_tag=AC57_RS18070;product=protein YmdA;protein_id=WP_000489587.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 2556 3089 . + . ID=gene-AC57_RS18065;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AC57_RS18065;old_locus_tag=AC57_1104 NZ_JJLR01000044.1 Protein Homology CDS 2556 3089 . + 0 ID=cds-WP_000857405.1;Parent=gene-AC57_RS18065;Dbxref=GenBank:WP_000857405.1;Name=WP_000857405.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AC57_RS18065;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 3031 4512 . + . ID=gene-AC57_RS18060;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AC57_RS18060;old_locus_tag=AC57_1105 NZ_JJLR01000044.1 Protein Homology CDS 3031 4512 . + 0 ID=cds-WP_001307714.1;Parent=gene-AC57_RS18060;Dbxref=GenBank:WP_001307714.1;Name=WP_001307714.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AC57_RS18060;product=cardiolipin synthase ClsC;protein_id=WP_001307714.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 4520 5677 . - . ID=gene-AC57_RS18055;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AC57_RS18055;old_locus_tag=AC57_1106 NZ_JJLR01000044.1 Protein Homology CDS 4520 5677 . - 0 ID=cds-WP_001070375.1;Parent=gene-AC57_RS18055;Dbxref=GenBank:WP_001070375.1;Name=WP_001070375.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415565.1;locus_tag=AC57_RS18055;product=glucans biosynthesis protein MdoC;protein_id=WP_001070375.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 6071 7606 . + . ID=gene-AC57_RS18040;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AC57_RS18040;old_locus_tag=AC57_1109 NZ_JJLR01000044.1 Protein Homology CDS 6071 7606 . + 0 ID=cds-WP_001343212.1;Parent=gene-AC57_RS18040;Dbxref=GenBank:WP_001343212.1;Name=WP_001343212.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AC57_RS18040;product=glucans biosynthesis protein MdoG;protein_id=WP_001343212.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 7599 10142 . + . ID=gene-AC57_RS18035;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AC57_RS18035;old_locus_tag=AC57_1110 NZ_JJLR01000044.1 Protein Homology CDS 7599 10142 . + 0 ID=cds-WP_001295445.1;Parent=gene-AC57_RS18035;Dbxref=GenBank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AC57_RS18035;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 10315 10542 . + . ID=gene-AC57_RS18030;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AC57_RS18030;old_locus_tag=AC57_1111 NZ_JJLR01000044.1 Protein Homology CDS 10315 10542 . + 0 ID=cds-WP_001237205.1;Parent=gene-AC57_RS18030;Dbxref=GenBank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AC57_RS18030;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 10543 10917 . - . ID=gene-AC57_RS18025;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AC57_RS18025;old_locus_tag=AC57_1112 NZ_JJLR01000044.1 Protein Homology CDS 10543 10917 . - 0 ID=cds-WP_000180056.1;Parent=gene-AC57_RS18025;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AC57_RS18025;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 11000 12226 . - . ID=gene-AC57_RS18020;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AC57_RS18020;old_locus_tag=AC57_1113 NZ_JJLR01000044.1 Protein Homology CDS 11000 12226 . - 0 ID=cds-WP_000074172.1;Parent=gene-AC57_RS18020;Dbxref=GenBank:WP_000074172.1;Name=WP_000074172.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AC57_RS18020;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 12398 13318 . - . ID=gene-AC57_RS18015;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AC57_RS18015;old_locus_tag=AC57_1114 NZ_JJLR01000044.1 Protein Homology CDS 12398 13318 . - 0 ID=cds-WP_000183364.1;Parent=gene-AC57_RS18015;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AC57_RS18015;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 13543 14595 . + . ID=gene-AC57_RS18010;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=AC57_RS18010;old_locus_tag=AC57_1115 NZ_JJLR01000044.1 Protein Homology CDS 13543 14595 . + 0 ID=cds-WP_032279551.1;Parent=gene-AC57_RS18010;Dbxref=GenBank:WP_032279551.1;Name=WP_032279551.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415573.1;locus_tag=AC57_RS18010;product=rhodanese-related sulfurtransferase;protein_id=WP_032279551.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 14637 15212 . - . ID=gene-AC57_RS18005;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AC57_RS18005;old_locus_tag=AC57_1116 NZ_JJLR01000044.1 Protein Homology CDS 14637 15212 . - 0 ID=cds-WP_000749261.1;Parent=gene-AC57_RS18005;Dbxref=GenBank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AC57_RS18005;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JJLR01000044.1 RefSeq pseudogene 15216 15782 . - . ID=gene-AC57_RS18000;Name=yceJ;gbkey=Gene;gene=yceJ;gene_biotype=pseudogene;locus_tag=AC57_RS18000;old_locus_tag=AC57_1117;pseudo=true NZ_JJLR01000044.1 Protein Homology CDS 15216 15782 . - 0 ID=cds-AC57_RS18000;Parent=gene-AC57_RS18000;Note=internal stop;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yceJ;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415575.1;locus_tag=AC57_RS18000;product=cytochrome b;pseudo=true;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 16043 16156 . - . ID=gene-AC57_RS17995;Name=AC57_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17995;old_locus_tag=AC57_1119 NZ_JJLR01000044.1 Protein Homology CDS 16043 16156 . - 0 ID=cds-WP_001253418.1;Parent=gene-AC57_RS17995;Dbxref=GenBank:WP_001253418.1;Name=WP_001253418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AC57_RS17995;product=YceO family protein;protein_id=WP_001253418.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 16204 17322 . - . ID=gene-AC57_RS17990;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AC57_RS17990;old_locus_tag=AC57_1120 NZ_JJLR01000044.1 Protein Homology CDS 16204 17322 . - 0 ID=cds-WP_000872833.1;Parent=gene-AC57_RS17990;Dbxref=GenBank:WP_000872833.1;Name=WP_000872833.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415577.1;locus_tag=AC57_RS17990;product=N-methyl-L-tryptophan oxidase;protein_id=WP_000872833.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 17437 17691 . - . ID=gene-AC57_RS17985;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AC57_RS17985;old_locus_tag=AC57_1121 NZ_JJLR01000044.1 Protein Homology CDS 17437 17691 . - 0 ID=cds-WP_000414438.1;Parent=gene-AC57_RS17985;Dbxref=GenBank:WP_000414438.1;Name=WP_000414438.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415578.3;locus_tag=AC57_RS17985;product=biofilm formation regulator BssS;protein_id=WP_000414438.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 17980 18225 . - . ID=gene-AC57_RS17980;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AC57_RS17980;old_locus_tag=AC57_1122 NZ_JJLR01000044.1 Protein Homology CDS 17980 18225 . - 0 ID=cds-WP_001217754.1;Parent=gene-AC57_RS17980;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AC57_RS17980;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 18299 19345 . - . ID=gene-AC57_RS17975;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AC57_RS17975;old_locus_tag=AC57_1123 NZ_JJLR01000044.1 Protein Homology CDS 18299 19345 . - 0 ID=cds-WP_000126534.1;Parent=gene-AC57_RS17975;Dbxref=GenBank:WP_000126534.1;Name=WP_000126534.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AC57_RS17975;product=dihydroorotase;protein_id=WP_000126534.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 19451 20011 . - . ID=gene-AC57_RS17970;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=AC57_RS17970;old_locus_tag=AC57_1124 NZ_JJLR01000044.1 Protein Homology CDS 19451 20011 . - 0 ID=cds-WP_001295443.1;Parent=gene-AC57_RS17970;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AC57_RS17970;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 20145 20792 . - . ID=gene-AC57_RS17965;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AC57_RS17965;old_locus_tag=AC57_1125 NZ_JJLR01000044.1 Protein Homology CDS 20145 20792 . - 0 ID=cds-WP_000780912.1;Parent=gene-AC57_RS17965;Dbxref=GenBank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AC57_RS17965;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 20856 22064 . - . ID=gene-AC57_RS17960;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AC57_RS17960;old_locus_tag=AC57_1126 NZ_JJLR01000044.1 Protein Homology CDS 20856 22064 . - 0 ID=cds-WP_000092206.1;Parent=gene-AC57_RS17960;Dbxref=GenBank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AC57_RS17960;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 22300 22884 . + . ID=gene-AC57_RS17955;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AC57_RS17955;old_locus_tag=AC57_1127 NZ_JJLR01000044.1 Protein Homology CDS 22300 22884 . + 0 ID=cds-WP_000468186.1;Parent=gene-AC57_RS17955;Dbxref=GenBank:WP_000468186.1;Name=WP_000468186.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AC57_RS17955;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_000468186.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 22895 23542 . + . ID=gene-AC57_RS17950;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=AC57_RS17950;old_locus_tag=AC57_1128 NZ_JJLR01000044.1 Protein Homology CDS 22895 23542 . + 0 ID=cds-WP_000877107.1;Parent=gene-AC57_RS17950;Dbxref=GenBank:WP_000877107.1;Name=WP_000877107.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415585.1;locus_tag=AC57_RS17950;product=YceH family protein;protein_id=WP_000877107.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 23544 24467 . + . ID=gene-AC57_RS17945;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=AC57_RS17945;old_locus_tag=AC57_1129 NZ_JJLR01000044.1 Protein Homology CDS 23544 24467 . + 0 ID=cds-WP_000736158.1;Parent=gene-AC57_RS17945;Dbxref=GenBank:WP_000736158.1;Name=WP_000736158.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=yceM;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415586.1;locus_tag=AC57_RS17945;product=Gfo/Idh/MocA family protein;protein_id=WP_000736158.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 24577 26112 . + . ID=gene-AC57_RS17940;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AC57_RS17940;old_locus_tag=AC57_1130 NZ_JJLR01000044.1 Protein Homology CDS 24577 26112 . + 0 ID=cds-WP_001050683.1;Parent=gene-AC57_RS17940;Dbxref=GenBank:WP_001050683.1;Name=WP_001050683.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AC57_RS17940;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_001050683.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 26152 26568 . - . ID=gene-AC57_RS17935;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AC57_RS17935;old_locus_tag=AC57_1131 NZ_JJLR01000044.1 Protein Homology CDS 26152 26568 . - 0 ID=cds-WP_000197363.1;Parent=gene-AC57_RS17935;Dbxref=GenBank:WP_000197363.1;Name=WP_000197363.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415588.1;locus_tag=AC57_RS17935;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197363.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 26573 26866 . - . ID=gene-AC57_RS17930;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AC57_RS17930;old_locus_tag=AC57_1132 NZ_JJLR01000044.1 Protein Homology CDS 26573 26866 . - 0 ID=cds-WP_000020880.1;Parent=gene-AC57_RS17930;Dbxref=GenBank:WP_000020880.1;Name=WP_000020880.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415589.1;locus_tag=AC57_RS17930;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020880.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 26942 27601 . - . ID=gene-AC57_RS0123545;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AC57_RS0123545;old_locus_tag=AC57_1133 NZ_JJLR01000044.1 Protein Homology CDS 26942 27601 . - 0 ID=cds-WP_000905458.1;Parent=gene-AC57_RS0123545;Dbxref=GenBank:WP_000905458.1;Name=WP_000905458.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415590.1;locus_tag=AC57_RS0123545;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000905458.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 27756 28172 . + . ID=gene-AC57_RS17925;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AC57_RS17925;old_locus_tag=AC57_1135 NZ_JJLR01000044.1 Protein Homology CDS 27756 28172 . + 0 ID=cds-WP_000884702.1;Parent=gene-AC57_RS17925;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AC57_RS17925;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 28176 28580 . + . ID=gene-AC57_RS17920;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AC57_RS17920;old_locus_tag=AC57_1136 NZ_JJLR01000044.1 Protein Homology CDS 28176 28580 . + 0 ID=cds-WP_001196460.1;Parent=gene-AC57_RS17920;Dbxref=GenBank:WP_001196460.1;Name=WP_001196460.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AC57_RS17920;product=flagellar basal body rod protein FlgC;protein_id=WP_001196460.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 28592 29287 . + . ID=gene-AC57_RS17915;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AC57_RS17915;old_locus_tag=AC57_1137 NZ_JJLR01000044.1 Protein Homology CDS 28592 29287 . + 0 ID=cds-WP_000020486.1;Parent=gene-AC57_RS17915;Dbxref=GenBank:WP_000020486.1;Name=WP_000020486.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415593.1;locus_tag=AC57_RS17915;product=flagellar hook assembly protein FlgD;protein_id=WP_000020486.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 29312 30520 . + . ID=gene-AC57_RS17910;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AC57_RS17910;old_locus_tag=AC57_1138 NZ_JJLR01000044.1 Protein Homology CDS 29312 30520 . + 0 ID=cds-WP_000885873.1;Parent=gene-AC57_RS17910;Dbxref=GenBank:WP_000885873.1;Name=WP_000885873.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415594.1;locus_tag=AC57_RS17910;product=flagellar hook protein FlgE;protein_id=WP_000885873.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 30540 31295 . + . ID=gene-AC57_RS17905;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AC57_RS17905;old_locus_tag=AC57_1139 NZ_JJLR01000044.1 Protein Homology CDS 30540 31295 . + 0 ID=cds-WP_000349316.1;Parent=gene-AC57_RS17905;Dbxref=GenBank:WP_000349316.1;Name=WP_000349316.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AC57_RS17905;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349316.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 31467 32249 . + . ID=gene-AC57_RS17900;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AC57_RS17900;old_locus_tag=AC57_1140 NZ_JJLR01000044.1 Protein Homology CDS 31467 32249 . + 0 ID=cds-WP_000625837.1;Parent=gene-AC57_RS17900;Dbxref=GenBank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AC57_RS17900;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 32302 33000 . + . ID=gene-AC57_RS17895;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AC57_RS17895;old_locus_tag=AC57_1141 NZ_JJLR01000044.1 Protein Homology CDS 32302 33000 . + 0 ID=cds-WP_001295442.1;Parent=gene-AC57_RS17895;Dbxref=GenBank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AC57_RS17895;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 33012 34109 . + . ID=gene-AC57_RS17890;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AC57_RS17890;old_locus_tag=AC57_1142 NZ_JJLR01000044.1 Protein Homology CDS 33012 34109 . + 0 ID=cds-WP_000589326.1;Parent=gene-AC57_RS17890;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AC57_RS17890;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 34109 35050 . + . ID=gene-AC57_RS17885;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AC57_RS17885;old_locus_tag=AC57_1143 NZ_JJLR01000044.1 Protein Homology CDS 34109 35050 . + 0 ID=cds-WP_032237172.1;Parent=gene-AC57_RS17885;Dbxref=GenBank:WP_032237172.1;Name=WP_032237172.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309486.1;locus_tag=AC57_RS17885;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_032237172.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 35116 36759 . + . ID=gene-AC57_RS17880;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AC57_RS17880;old_locus_tag=AC57_1144 NZ_JJLR01000044.1 Protein Homology CDS 35116 36759 . + 0 ID=cds-WP_032237171.1;Parent=gene-AC57_RS17880;Dbxref=GenBank:WP_032237171.1;Name=WP_032237171.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415600.1;locus_tag=AC57_RS17880;product=flagellar hook-associated protein FlgK;protein_id=WP_032237171.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 36771 37724 . + . ID=gene-AC57_RS17875;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AC57_RS17875;old_locus_tag=AC57_1145 NZ_JJLR01000044.1 Protein Homology CDS 36771 37724 . + 0 ID=cds-WP_032237170.1;Parent=gene-AC57_RS17875;Dbxref=GenBank:WP_032237170.1;Name=WP_032237170.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415601.1;locus_tag=AC57_RS17875;product=flagellar hook-associated protein FlgL;protein_id=WP_032237170.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 37920 41105 . - . ID=gene-AC57_RS17870;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AC57_RS17870;old_locus_tag=AC57_1146 NZ_JJLR01000044.1 Protein Homology CDS 37920 41105 . - 0 ID=cds-WP_001752415.1;Parent=gene-AC57_RS17870;Dbxref=GenBank:WP_001752415.1;Name=WP_001752415.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415602.1;locus_tag=AC57_RS17870;product=ribonuclease E;protein_id=WP_001752415.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 41678 42637 . + . ID=gene-AC57_RS17865;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AC57_RS17865;old_locus_tag=AC57_1148 NZ_JJLR01000044.1 Protein Homology CDS 41678 42637 . + 0 ID=cds-WP_000846343.1;Parent=gene-AC57_RS17865;Dbxref=GenBank:WP_000846343.1;Name=WP_000846343.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415604.1;locus_tag=AC57_RS17865;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846343.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 42749 43333 . - . ID=gene-AC57_RS17860;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AC57_RS17860;old_locus_tag=AC57_1150 NZ_JJLR01000044.1 Protein Homology CDS 42749 43333 . - 0 ID=cds-WP_001125202.1;Parent=gene-AC57_RS17860;Dbxref=GenBank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AC57_RS17860;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 43532 44053 . + . ID=gene-AC57_RS17855;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AC57_RS17855;old_locus_tag=AC57_1151 NZ_JJLR01000044.1 Protein Homology CDS 43532 44053 . + 0 ID=cds-WP_001174481.1;Parent=gene-AC57_RS17855;Dbxref=GenBank:WP_001174481.1;Name=WP_001174481.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AC57_RS17855;product=23S rRNA accumulation protein YceD;protein_id=WP_001174481.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 44105 44278 . + . ID=gene-AC57_RS17850;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AC57_RS17850;old_locus_tag=AC57_1152 NZ_JJLR01000044.1 Protein Homology CDS 44105 44278 . + 0 ID=cds-WP_000290727.1;Parent=gene-AC57_RS17850;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AC57_RS17850;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 44359 45429 . + . ID=gene-AC57_RS17845;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AC57_RS17845;old_locus_tag=AC57_1153 NZ_JJLR01000044.1 Protein Homology CDS 44359 45429 . + 0 ID=cds-WP_000197578.1;Parent=gene-AC57_RS17845;Dbxref=GenBank:WP_000197578.1;Name=WP_000197578.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AC57_RS17845;product=phosphate acyltransferase PlsX;protein_id=WP_000197578.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 45497 46450 . + . ID=gene-AC57_RS17840;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AC57_RS17840;old_locus_tag=AC57_1154 NZ_JJLR01000044.1 Protein Homology CDS 45497 46450 . + 0 ID=cds-WP_000288146.1;Parent=gene-AC57_RS17840;Dbxref=GenBank:WP_000288146.1;Name=WP_000288146.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AC57_RS17840;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288146.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 46466 47395 . + . ID=gene-AC57_RS17835;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AC57_RS17835;old_locus_tag=AC57_1155 NZ_JJLR01000044.1 Protein Homology CDS 46466 47395 . + 0 ID=cds-WP_000191372.1;Parent=gene-AC57_RS17835;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AC57_RS17835;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 47408 48142 . + . ID=gene-AC57_RS17830;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AC57_RS17830;old_locus_tag=AC57_1156 NZ_JJLR01000044.1 Protein Homology CDS 47408 48142 . + 0 ID=cds-WP_032279549.1;Parent=gene-AC57_RS17830;Dbxref=GenBank:WP_032279549.1;Name=WP_032279549.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AC57_RS17830;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_032279549.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 48353 48589 . + . ID=gene-AC57_RS17825;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AC57_RS17825;old_locus_tag=AC57_1157 NZ_JJLR01000044.1 Protein Homology CDS 48353 48589 . + 0 ID=cds-WP_000103754.1;Parent=gene-AC57_RS17825;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AC57_RS17825;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 48677 49918 . + . ID=gene-AC57_RS17820;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AC57_RS17820;old_locus_tag=AC57_1158 NZ_JJLR01000044.1 Protein Homology CDS 48677 49918 . + 0 ID=cds-WP_000044679.1;Parent=gene-AC57_RS17820;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AC57_RS17820;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 50038 50847 . + . ID=gene-AC57_RS17815;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AC57_RS17815;old_locus_tag=AC57_1159 NZ_JJLR01000044.1 Protein Homology CDS 50038 50847 . + 0 ID=cds-WP_000478709.1;Parent=gene-AC57_RS17815;Dbxref=GenBank:WP_000478709.1;Name=WP_000478709.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707012.1;locus_tag=AC57_RS17815;product=aminodeoxychorismate lyase;protein_id=WP_000478709.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 50850 51872 . + . ID=gene-AC57_RS17810;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AC57_RS17810;old_locus_tag=AC57_1160 NZ_JJLR01000044.1 Protein Homology CDS 50850 51872 . + 0 ID=cds-WP_000756827.1;Parent=gene-AC57_RS17810;Dbxref=GenBank:WP_000756827.1;Name=WP_000756827.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AC57_RS17810;product=cell division protein YceG;protein_id=WP_000756827.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 51862 52503 . + . ID=gene-AC57_RS17805;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AC57_RS17805;old_locus_tag=AC57_1161 NZ_JJLR01000044.1 Protein Homology CDS 51862 52503 . + 0 ID=cds-WP_001257000.1;Parent=gene-AC57_RS17805;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AC57_RS17805;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 52500 53504 . + . ID=gene-AC57_RS17800;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AC57_RS17800;old_locus_tag=AC57_1162 NZ_JJLR01000044.1 Protein Homology CDS 52500 53504 . + 0 ID=cds-WP_001267956.1;Parent=gene-AC57_RS17800;Dbxref=GenBank:WP_001267956.1;Name=WP_001267956.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415617.1;locus_tag=AC57_RS17800;product=DNA polymerase III subunit delta';protein_id=WP_001267956.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 53515 54312 . + . ID=gene-AC57_RS17795;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=AC57_RS17795;old_locus_tag=AC57_1163 NZ_JJLR01000044.1 Protein Homology CDS 53515 54312 . + 0 ID=cds-WP_000480245.1;Parent=gene-AC57_RS17795;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AC57_RS17795;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 54607 56040 . + . ID=gene-AC57_RS17790;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AC57_RS17790;old_locus_tag=AC57_1164 NZ_JJLR01000044.1 Protein Homology CDS 54607 56040 . + 0 ID=cds-WP_000475719.1;Parent=gene-AC57_RS17790;Dbxref=GenBank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AC57_RS17790;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 56100 58289 . - . ID=gene-AC57_RS17785;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=AC57_RS17785;old_locus_tag=AC57_1165 NZ_JJLR01000044.1 Protein Homology CDS 56100 58289 . - 0 ID=cds-WP_032279548.1;Parent=gene-AC57_RS17785;Dbxref=GenBank:WP_032279548.1;Name=WP_032279548.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415620.1;locus_tag=AC57_RS17785;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_032279548.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 58623 58982 . + . ID=gene-AC57_RS17780;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AC57_RS17780;old_locus_tag=AC57_1167 NZ_JJLR01000044.1 Protein Homology CDS 58623 58982 . + 0 ID=cds-WP_000807125.1;Parent=gene-AC57_RS17780;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AC57_RS17780;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 58985 59362 . + . ID=gene-AC57_RS17775;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=AC57_RS17775;old_locus_tag=AC57_1168 NZ_JJLR01000044.1 Protein Homology CDS 58985 59362 . + 0 ID=cds-WP_001225295.1;Parent=gene-AC57_RS17775;Dbxref=GenBank:WP_001225295.1;Name=WP_001225295.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415622.1;locus_tag=AC57_RS17775;product=YcfL family protein;protein_id=WP_001225295.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 59376 60017 . + . ID=gene-AC57_RS17770;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AC57_RS17770;old_locus_tag=AC57_1169 NZ_JJLR01000044.1 Protein Homology CDS 59376 60017 . + 0 ID=cds-WP_000164439.1;Parent=gene-AC57_RS17770;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AC57_RS17770;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 59998 60822 . + . ID=gene-AC57_RS17765;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AC57_RS17765;old_locus_tag=AC57_1170 NZ_JJLR01000044.1 Protein Homology CDS 59998 60822 . + 0 ID=cds-WP_032246243.1;Parent=gene-AC57_RS17765;Dbxref=GenBank:WP_032246243.1;Name=WP_032246243.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415624.1;locus_tag=AC57_RS17765;product=thiamine kinase;protein_id=WP_032246243.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 60833 61858 . + . ID=gene-AC57_RS17760;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AC57_RS17760;old_locus_tag=AC57_1171 NZ_JJLR01000044.1 Protein Homology CDS 60833 61858 . + 0 ID=cds-WP_000529320.1;Parent=gene-AC57_RS17760;Dbxref=GenBank:WP_000529320.1;Name=WP_000529320.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415625.1;locus_tag=AC57_RS17760;product=beta-N-acetylhexosaminidase;protein_id=WP_000529320.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 61881 62423 . + . ID=gene-AC57_RS17755;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AC57_RS17755;old_locus_tag=AC57_1172 NZ_JJLR01000044.1 Protein Homology CDS 61881 62423 . + 0 ID=cds-WP_000587933.1;Parent=gene-AC57_RS17755;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AC57_RS17755;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 62823 64127 . + . ID=gene-AC57_RS17750;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AC57_RS17750;old_locus_tag=AC57_1173 NZ_JJLR01000044.1 Protein Homology CDS 62823 64127 . + 0 ID=cds-WP_000211045.1;Parent=gene-AC57_RS17750;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AC57_RS17750;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 64354 64893 . + . ID=gene-AC57_RS17745;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=AC57_RS17745;old_locus_tag=AC57_1174 NZ_JJLR01000044.1 Protein Homology CDS 64354 64893 . + 0 ID=cds-WP_001043459.1;Parent=gene-AC57_RS17745;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AC57_RS17745;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 64955 65587 . - . ID=gene-AC57_RS17740;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AC57_RS17740;old_locus_tag=AC57_1175 NZ_JJLR01000044.1 Protein Homology CDS 64955 65587 . - 0 ID=cds-WP_001336528.1;Parent=gene-AC57_RS17740;Dbxref=GenBank:WP_001336528.1;Name=WP_001336528.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AC57_RS17740;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_001336528.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 65828 66085 . + . ID=gene-AC57_RS17735;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AC57_RS17735;old_locus_tag=AC57_1176 NZ_JJLR01000044.1 Protein Homology CDS 65828 66085 . + 0 ID=cds-WP_000800153.1;Parent=gene-AC57_RS17735;Dbxref=GenBank:WP_000800153.1;Name=WP_000800153.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AC57_RS17735;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 66168 67130 . - . ID=gene-AC57_RS17730;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AC57_RS17730;old_locus_tag=AC57_1177 NZ_JJLR01000044.1 Protein Homology CDS 66168 67130 . - 0 ID=cds-WP_001300895.1;Parent=gene-AC57_RS17730;Dbxref=GenBank:WP_001300895.1;Name=WP_001300895.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AC57_RS17730;product=L%2CD-transpeptidase LdtC;protein_id=WP_001300895.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 67274 70720 . - . ID=gene-AC57_RS17725;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AC57_RS17725;old_locus_tag=AC57_1178 NZ_JJLR01000044.1 Protein Homology CDS 67274 70720 . - 0 ID=cds-WP_001752427.1;Parent=gene-AC57_RS17725;Dbxref=GenBank:WP_001752427.1;Name=WP_001752427.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AC57_RS17725;product=transcription-repair coupling factor;protein_id=WP_001752427.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 70848 71921 . - . ID=gene-AC57_RS17720;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=AC57_RS17720;old_locus_tag=AC57_1179 NZ_JJLR01000044.1 Protein Homology CDS 70848 71921 . - 0 ID=cds-WP_000810253.1;Parent=gene-AC57_RS17720;Dbxref=GenBank:WP_000810253.1;Name=WP_000810253.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415633.1;locus_tag=AC57_RS17720;product=acyltransferase family protein;protein_id=WP_000810253.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 72183 73382 . + . ID=gene-AC57_RS17715;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AC57_RS17715;old_locus_tag=AC57_1180 NZ_JJLR01000044.1 Protein Homology CDS 72183 73382 . + 0 ID=cds-WP_000284714.1;Parent=gene-AC57_RS17715;Dbxref=GenBank:WP_000284714.1;Name=WP_000284714.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AC57_RS17715;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_000284714.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 73375 74076 . + . ID=gene-AC57_RS17710;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AC57_RS17710;old_locus_tag=AC57_1181 NZ_JJLR01000044.1 Protein Homology CDS 73375 74076 . + 0 ID=cds-WP_001033695.1;Parent=gene-AC57_RS17710;Dbxref=GenBank:WP_001033695.1;Name=WP_001033695.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309522.2;locus_tag=AC57_RS17710;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033695.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 74076 75320 . + . ID=gene-AC57_RS17705;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AC57_RS17705;old_locus_tag=AC57_1182 NZ_JJLR01000044.1 Protein Homology CDS 74076 75320 . + 0 ID=cds-WP_001251384.1;Parent=gene-AC57_RS17705;Dbxref=GenBank:WP_001251384.1;Name=WP_001251384.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707033.1;locus_tag=AC57_RS17705;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251384.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 75349 76260 . + . ID=gene-AC57_RS17700;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AC57_RS17700;old_locus_tag=AC57_1183 NZ_JJLR01000044.1 Protein Homology CDS 75349 76260 . + 0 ID=cds-WP_000291268.1;Parent=gene-AC57_RS17700;Dbxref=GenBank:WP_000291268.1;Name=WP_000291268.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AC57_RS17700;product=N-acetylglucosamine kinase;protein_id=WP_000291268.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 76276 77115 . + . ID=gene-AC57_RS17695;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AC57_RS17695;old_locus_tag=AC57_1184 NZ_JJLR01000044.1 Protein Homology CDS 76276 77115 . + 0 ID=cds-WP_000952737.1;Parent=gene-AC57_RS17695;Dbxref=GenBank:WP_000952737.1;Name=WP_000952737.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415638.3;locus_tag=AC57_RS17695;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952737.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 77235 78023 . - . ID=gene-AC57_RS17690;Name=ycfZ;gbkey=Gene;gene=ycfZ;gene_biotype=protein_coding;locus_tag=AC57_RS17690;old_locus_tag=AC57_1185 NZ_JJLR01000044.1 Protein Homology CDS 77235 78023 . - 0 ID=cds-WP_000713462.1;Parent=gene-AC57_RS17690;Dbxref=GenBank:WP_000713462.1;Name=WP_000713462.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ycfZ;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AC57_RS17690;product=TPM domain-containing protein;protein_id=WP_000713462.1;transl_table=11 NZ_JJLR01000044.1 RefSeq gene 78085 78298 . - . ID=gene-AC57_RS17685;Name=AC57_RS17685;end_range=78298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17685;old_locus_tag=AC57_1186;partial=true NZ_JJLR01000044.1 Protein Homology CDS 78085 78298 . - 1 ID=cds-WP_000327107.1-2;Parent=gene-AC57_RS17685;Dbxref=GenBank:WP_000327107.1;Name=WP_000327107.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=78298,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS17685;partial=true;product=IS1 family transposase;protein_id=WP_000327107.1;transl_table=11 ##sequence-region NZ_JJLR01000045.1 1 19714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000045.1 RefSeq region 1 19714 . + . ID=NZ_JJLR01000045.1:1..19714;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000045.1 RefSeq gene 1 241 . - . ID=gene-AC57_RS0123555;Name=AC57_RS0123555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123555;old_locus_tag=AC57_1187;partial=true;start_range=.,1 NZ_JJLR01000045.1 Protein Homology CDS 1 241 . - 0 ID=cds-WP_000179208.1;Parent=gene-AC57_RS0123555;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123555;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;start_range=.,1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 292 717 . - . ID=gene-AC57_RS17680;Name=ymfA;gbkey=Gene;gene=ymfA;gene_biotype=protein_coding;locus_tag=AC57_RS17680;old_locus_tag=AC57_1188 NZ_JJLR01000045.1 Protein Homology CDS 292 717 . - 0 ID=cds-WP_050440067.1;Parent=gene-AC57_RS17680;Dbxref=GenBank:WP_050440067.1;Name=WP_050440067.1;gbkey=CDS;gene=ymfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001442351.1;locus_tag=AC57_RS17680;product=DUF3592 domain-containing protein;protein_id=WP_050440067.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 775 1821 . - . ID=gene-AC57_RS17675;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AC57_RS17675;old_locus_tag=AC57_1189 NZ_JJLR01000045.1 Protein Homology CDS 775 1821 . - 0 ID=cds-WP_032279978.1;Parent=gene-AC57_RS17675;Dbxref=GenBank:WP_032279978.1;Name=WP_032279978.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AC57_RS17675;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_032279978.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 1818 2612 . - . ID=gene-AC57_RS17670;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AC57_RS17670;old_locus_tag=AC57_1190 NZ_JJLR01000045.1 Protein Homology CDS 1818 2612 . - 0 ID=cds-WP_000580316.1;Parent=gene-AC57_RS17670;Dbxref=GenBank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AC57_RS17670;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 2609 3466 . - . ID=gene-AC57_RS17665;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AC57_RS17665;old_locus_tag=AC57_1191 NZ_JJLR01000045.1 Protein Homology CDS 2609 3466 . - 0 ID=cds-WP_000799401.1;Parent=gene-AC57_RS17665;Dbxref=GenBank:WP_000799401.1;Name=WP_000799401.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=AC57_RS17665;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 3450 4586 . - . ID=gene-AC57_RS17660;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AC57_RS17660;old_locus_tag=AC57_1192 NZ_JJLR01000045.1 Protein Homology CDS 3450 4586 . - 0 ID=cds-WP_000531601.1;Parent=gene-AC57_RS17660;Dbxref=GenBank:WP_000531601.1;Name=WP_000531601.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AC57_RS17660;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531601.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 4836 6065 . + . ID=gene-AC57_RS17650;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AC57_RS17650;old_locus_tag=AC57_1194 NZ_JJLR01000045.1 Protein Homology CDS 4836 6065 . + 0 ID=cds-WP_032279977.1;Parent=gene-AC57_RS17650;Dbxref=GenBank:WP_032279977.1;Name=WP_032279977.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359435.1;locus_tag=AC57_RS17650;product=peptidase T;protein_id=WP_032279977.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 6211 7332 . - . ID=gene-AC57_RS17645;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AC57_RS17645;old_locus_tag=AC57_1195 NZ_JJLR01000045.1 Protein Homology CDS 6211 7332 . - 0 ID=cds-WP_001295435.1;Parent=gene-AC57_RS17645;Dbxref=GenBank:WP_001295435.1;Name=WP_001295435.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309600.2;locus_tag=AC57_RS17645;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_001295435.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 7408 8868 . - . ID=gene-AC57_RS17640;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AC57_RS17640;old_locus_tag=AC57_1196 NZ_JJLR01000045.1 Protein Homology CDS 7408 8868 . - 0 ID=cds-WP_000735411.1;Parent=gene-AC57_RS17640;Dbxref=GenBank:WP_000735411.1;Name=WP_000735411.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AC57_RS17640;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735411.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 8868 9539 . - . ID=gene-AC57_RS17635;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AC57_RS17635;old_locus_tag=AC57_1197 NZ_JJLR01000045.1 Protein Homology CDS 8868 9539 . - 0 ID=cds-WP_001265481.1;Parent=gene-AC57_RS17635;Dbxref=GenBank:WP_001265481.1;Name=WP_001265481.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=AC57_RS17635;product=two-component system response regulator PhoP;protein_id=WP_001265481.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 9707 11077 . - . ID=gene-AC57_RS17630;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AC57_RS17630;old_locus_tag=AC57_1198 NZ_JJLR01000045.1 Protein Homology CDS 9707 11077 . - 0 ID=cds-WP_000423742.1;Parent=gene-AC57_RS17630;Dbxref=GenBank:WP_000423742.1;Name=WP_000423742.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AC57_RS17630;product=adenylosuccinate lyase;protein_id=WP_000423742.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 11081 11722 . - . ID=gene-AC57_RS17625;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AC57_RS17625;old_locus_tag=AC57_1199 NZ_JJLR01000045.1 Protein Homology CDS 11081 11722 . - 0 ID=cds-WP_001297479.1;Parent=gene-AC57_RS17625;Dbxref=GenBank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AC57_RS17625;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 11758 12864 . - . ID=gene-AC57_RS17620;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AC57_RS17620;old_locus_tag=AC57_1200 NZ_JJLR01000045.1 Protein Homology CDS 11758 12864 . - 0 ID=cds-WP_032279976.1;Parent=gene-AC57_RS17620;Dbxref=GenBank:WP_032279976.1;Name=WP_032279976.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AC57_RS17620;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_032279976.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 12917 13378 . - . ID=gene-AC57_RS17615;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AC57_RS17615;old_locus_tag=AC57_1201 NZ_JJLR01000045.1 Protein Homology CDS 12917 13378 . - 0 ID=cds-WP_000476093.1;Parent=gene-AC57_RS17615;Dbxref=GenBank:WP_000476093.1;Name=WP_000476093.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AC57_RS17615;product=phosphatase NudJ;protein_id=WP_000476093.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 13388 14041 . - . ID=gene-AC57_RS17610;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AC57_RS17610;old_locus_tag=AC57_1202 NZ_JJLR01000045.1 Protein Homology CDS 13388 14041 . - 0 ID=cds-WP_001248691.1;Parent=gene-AC57_RS17610;Dbxref=GenBank:WP_001248691.1;Name=WP_001248691.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415653.4;locus_tag=AC57_RS17610;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_001248691.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 14213 15463 . + . ID=gene-AC57_RS17605;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AC57_RS17605;old_locus_tag=AC57_1203 NZ_JJLR01000045.1 Protein Homology CDS 14213 15463 . + 0 ID=cds-WP_000444488.1;Parent=gene-AC57_RS17605;Dbxref=GenBank:WP_000444488.1;Name=WP_000444488.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AC57_RS17605;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444488.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 15566 15889 . - . ID=gene-AC57_RS0123560;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AC57_RS0123560 NZ_JJLR01000045.1 Protein Homology CDS 15566 15889 . - 0 ID=cds-WP_024238699.1;Parent=gene-AC57_RS0123560;Dbxref=GenBank:WP_024238699.1;Name=WP_024238699.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AC57_RS0123560;product=anti-adapter protein IraM;protein_id=WP_024238699.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 16142 16186 . - . ID=gene-AC57_RS30205;Name=AC57_RS30205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30205 NZ_JJLR01000045.1 Protein Homology CDS 16142 16186 . - 0 ID=cds-WP_120795380.1;Parent=gene-AC57_RS30205;Dbxref=GenBank:WP_120795380.1;Name=WP_120795380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AC57_RS30205;product=protein YmgK;protein_id=WP_120795380.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 16422 16532 . - . ID=gene-AC57_RS29685;Name=AC57_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29685 NZ_JJLR01000045.1 Protein Homology CDS 16422 16532 . - 0 ID=cds-WP_032237861.1;Parent=gene-AC57_RS29685;Dbxref=GenBank:WP_032237861.1;Name=WP_032237861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AC57_RS29685;product=protein YmgL;protein_id=WP_032237861.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 16585 16989 . - . ID=gene-AC57_RS17600;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=AC57_RS17600;old_locus_tag=AC57_1204 NZ_JJLR01000045.1 Protein Homology CDS 16585 16989 . - 0 ID=cds-WP_000373101.1;Parent=gene-AC57_RS17600;Dbxref=GenBank:WP_000373101.1;Name=WP_000373101.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AC57_RS17600;product=DUF1398 domain-containing protein;protein_id=WP_000373101.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 17210 17941 . - . ID=gene-AC57_RS17595;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AC57_RS17595;old_locus_tag=AC57_1205 NZ_JJLR01000045.1 Protein Homology CDS 17210 17941 . - 0 ID=cds-WP_001752432.1;Parent=gene-AC57_RS17595;Dbxref=GenBank:WP_001752432.1;Name=WP_001752432.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AC57_RS17595;product=DNA-binding transcriptional repressor BluR;protein_id=WP_001752432.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 18146 19357 . - . ID=gene-AC57_RS17590;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=protein_coding;locus_tag=AC57_RS17590;old_locus_tag=AC57_1206 NZ_JJLR01000045.1 Protein Homology CDS 18146 19357 . - 0 ID=cds-WP_001299269.1;Parent=gene-AC57_RS17590;Dbxref=GenBank:WP_001299269.1;Name=WP_001299269.1;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AC57_RS17590;product=blue light-responsive regulator BluF;protein_id=WP_001299269.1;transl_table=11 NZ_JJLR01000045.1 RefSeq gene 19468 19714 . + . ID=gene-AC57_RS0123570;Name=AC57_RS0123570;end_range=19714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123570;old_locus_tag=AC57_1207;partial=true NZ_JJLR01000045.1 Protein Homology CDS 19468 19714 . + 0 ID=cds-WP_001473862.1;Parent=gene-AC57_RS0123570;Dbxref=GenBank:WP_001473862.1;Name=WP_001473862.1;end_range=19714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123570;partial=true;product=IS1-like element transposase;protein_id=WP_001473862.1;transl_table=11 ##sequence-region NZ_JJLR01000046.1 1 5365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000046.1 RefSeq region 1 5365 . + . ID=NZ_JJLR01000046.1:1..5365;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000046.1 RefSeq gene 1 257 . + . ID=gene-AC57_RS17585;Name=AC57_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17585;old_locus_tag=AC57_1208;partial=true;start_range=.,1 NZ_JJLR01000046.1 Protein Homology CDS 1 257 . + 2 ID=cds-WP_000363925.1;Parent=gene-AC57_RS17585;Dbxref=GenBank:WP_000363925.1;Name=WP_000363925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS17585;partial=true;product=IS1 family transposase;protein_id=WP_000363925.1;start_range=.,1;transl_table=11 NZ_JJLR01000046.1 RefSeq gene 540 776 . + . ID=gene-AC57_RS0123575;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=AC57_RS0123575 NZ_JJLR01000046.1 Protein Homology CDS 540 776 . + 0 ID=cds-WP_000554153.1;Parent=gene-AC57_RS0123575;Dbxref=GenBank:WP_000554153.1;Name=WP_000554153.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AC57_RS0123575;product=regulatory protein YcgZ;protein_id=WP_000554153.1;transl_table=11 NZ_JJLR01000046.1 RefSeq gene 819 1091 . + . ID=gene-AC57_RS0123580;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AC57_RS0123580 NZ_JJLR01000046.1 Protein Homology CDS 819 1091 . + 0 ID=cds-WP_024171489.1;Parent=gene-AC57_RS0123580;Dbxref=GenBank:WP_024171489.1;Name=WP_024171489.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AC57_RS0123580;product=hypothetical protein;protein_id=WP_024171489.1;transl_table=11 NZ_JJLR01000046.1 RefSeq gene 1120 1386 . + . ID=gene-AC57_RS0123585;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ymgB;locus_tag=AC57_RS0123585 NZ_JJLR01000046.1 Protein Homology CDS 1120 1386 . + 0 ID=cds-WP_032237996.1;Parent=gene-AC57_RS0123585;Dbxref=GenBank:WP_032237996.1;Name=WP_032237996.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AC57_RS0123585;product=biofilm/acid-resistance regulator AriR;protein_id=WP_032237996.1;transl_table=11 NZ_JJLR01000046.1 RefSeq gene 1499 1747 . + . ID=gene-AC57_RS0123590;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=AC57_RS0123590;old_locus_tag=AC57_1210 NZ_JJLR01000046.1 Protein Homology CDS 1499 1747 . + 0 ID=cds-WP_001065752.1;Parent=gene-AC57_RS0123590;Dbxref=GenBank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AC57_RS0123590;product=protein YmgC;protein_id=WP_001065752.1;transl_table=11 NZ_JJLR01000046.1 RefSeq gene 2079 3602 . + . ID=gene-AC57_RS0123595;Name=pdeG;gbkey=Gene;gene=pdeG;gene_biotype=protein_coding;locus_tag=AC57_RS0123595 NZ_JJLR01000046.1 Protein Homology CDS 2079 3602 . + 0 ID=cds-WP_032231010.1;Parent=gene-AC57_RS0123595;Dbxref=GenBank:WP_032231010.1;Name=WP_032231010.1;gbkey=CDS;gene=pdeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AC57_RS0123595;product=EAL domain-containing protein;protein_id=WP_032231010.1;transl_table=11 NZ_JJLR01000046.1 RefSeq gene 3734 3952 . + . ID=gene-AC57_RS17580;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=AC57_RS17580;old_locus_tag=AC57_1212 NZ_JJLR01000046.1 Protein Homology CDS 3734 3952 . + 0 ID=cds-WP_001065861.1;Parent=gene-AC57_RS17580;Dbxref=GenBank:WP_001065861.1;Name=WP_001065861.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ymgF;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AC57_RS17580;product=cell division-associated protein YmgF;protein_id=WP_001065861.1;transl_table=11 NZ_JJLR01000046.1 RefSeq pseudogene 4352 5092 . + . ID=gene-AC57_RS17575;Name=ycgH;end_range=5092,.;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AC57_RS17575;old_locus_tag=AC57_1214;partial=true;pseudo=true NZ_JJLR01000046.1 Protein Homology CDS 4352 5092 . + 0 ID=cds-AC57_RS17575;Parent=gene-AC57_RS17575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5092,.;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AC57_RS17575;partial=true;product=autotransporter YcgH;pseudo=true;transl_table=11 NZ_JJLR01000046.1 RefSeq gene 5109 5365 . - . ID=gene-AC57_RS17570;Name=AC57_RS17570;end_range=5365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17570;old_locus_tag=AC57_1215;partial=true NZ_JJLR01000046.1 Protein Homology CDS 5109 5365 . - 2 ID=cds-WP_000363925.1-2;Parent=gene-AC57_RS17570;Dbxref=GenBank:WP_000363925.1;Name=WP_000363925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=5365,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS17570;partial=true;product=IS1 family transposase;protein_id=WP_000363925.1;transl_table=11 ##sequence-region NZ_JJLR01000047.1 1 2467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000047.1 RefSeq region 1 2467 . + . ID=NZ_JJLR01000047.1:1..2467;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000047.1 RefSeq gene 1 269 . - . ID=gene-AC57_RS17565;Name=AC57_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17565;old_locus_tag=AC57_1216;partial=true;start_range=.,1 NZ_JJLR01000047.1 Protein Homology CDS 1 269 . - 0 ID=cds-WP_001483704.1-4;Parent=gene-AC57_RS17565;Dbxref=GenBank:WP_001483704.1;Name=WP_001483704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS17565;partial=true;product=IS1-like element transposase;protein_id=WP_001483704.1;start_range=.,1;transl_table=11 NZ_JJLR01000047.1 RefSeq pseudogene 326 2200 . + . ID=gene-AC57_RS0123605;Name=ycgH;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AC57_RS0123605;partial=true;pseudo=true;start_range=.,326 NZ_JJLR01000047.1 Protein Homology CDS 326 2200 . + 0 ID=cds-AC57_RS0123605;Parent=gene-AC57_RS0123605;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AC57_RS0123605;partial=true;product=autotransporter YcgH;pseudo=true;start_range=.,326;transl_table=11 NZ_JJLR01000047.1 RefSeq gene 2211 2467 . - . ID=gene-AC57_RS0123610;Name=AC57_RS0123610;end_range=2467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123610;partial=true NZ_JJLR01000047.1 Protein Homology CDS 2211 2467 . - 2 ID=cds-WP_000363925.1-3;Parent=gene-AC57_RS0123610;Dbxref=GenBank:WP_000363925.1;Name=WP_000363925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2467,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123610;partial=true;product=IS1 family transposase;protein_id=WP_000363925.1;transl_table=11 ##sequence-region NZ_JJLR01000048.1 1 31432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000048.1 RefSeq region 1 31432 . + . ID=NZ_JJLR01000048.1:1..31432;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000048.1 RefSeq gene 1 175 . - . ID=gene-AC57_RS26815;Name=AC57_RS26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26815;old_locus_tag=AC57_1218;partial=true;start_range=.,1 NZ_JJLR01000048.1 Protein Homology CDS 1 175 . - 0 ID=cds-WP_001348133.1;Parent=gene-AC57_RS26815;Dbxref=GenBank:WP_001348133.1;Name=WP_001348133.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26815;partial=true;product=IS1 family transposase;protein_id=WP_001348133.1;start_range=.,1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 342 677 . - . ID=gene-AC57_RS17560;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AC57_RS17560;old_locus_tag=AC57_1219 NZ_JJLR01000048.1 Protein Homology CDS 342 677 . - 0 ID=cds-WP_000979977.1;Parent=gene-AC57_RS17560;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AC57_RS17560;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 681 1025 . - . ID=gene-AC57_RS17555;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AC57_RS17555;old_locus_tag=AC57_1220 NZ_JJLR01000048.1 Protein Homology CDS 681 1025 . - 0 ID=cds-WP_000726974.1;Parent=gene-AC57_RS17555;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AC57_RS17555;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 1027 1200 . - . ID=gene-AC57_RS17550;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AC57_RS17550;old_locus_tag=AC57_1221 NZ_JJLR01000048.1 Protein Homology CDS 1027 1200 . - 0 ID=cds-WP_000122462.1;Parent=gene-AC57_RS17550;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AC57_RS17550;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 1301 1486 . + . ID=gene-AC57_RS26820;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AC57_RS26820 NZ_JJLR01000048.1 Protein Homology CDS 1301 1486 . + 0 ID=cds-WP_001325005.1;Parent=gene-AC57_RS26820;Dbxref=GenBank:WP_001325005.1;Name=WP_001325005.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AC57_RS26820;product=protein YmgJ;protein_id=WP_001325005.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 1447 1566 . + . ID=gene-AC57_RS29690;Name=AC57_RS29690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29690;old_locus_tag=AC57_1222 NZ_JJLR01000048.1 Protein Homology CDS 1447 1566 . + 0 ID=cds-WP_001131446.1;Parent=gene-AC57_RS29690;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AC57_RS29690;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JJLR01000048.1 RefSeq pseudogene 1601 1944 . + . ID=gene-AC57_RS0123615;Name=AC57_RS0123615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123615;partial=true;pseudo=true;start_range=.,1601 NZ_JJLR01000048.1 Protein Homology CDS 1601 1944 . + 0 ID=cds-AC57_RS0123615;Parent=gene-AC57_RS0123615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AC57_RS0123615;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,1601;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 2316 2582 . - . ID=gene-AC57_RS17545;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AC57_RS17545;old_locus_tag=AC57_1224 NZ_JJLR01000048.1 Protein Homology CDS 2316 2582 . - 0 ID=cds-WP_001185665.1;Parent=gene-AC57_RS17545;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AC57_RS17545;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 2586 3398 . - . ID=gene-AC57_RS17540;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AC57_RS17540;old_locus_tag=AC57_1225 NZ_JJLR01000048.1 Protein Homology CDS 2586 3398 . - 0 ID=cds-WP_000101055.1;Parent=gene-AC57_RS17540;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AC57_RS17540;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 3422 4117 . - . ID=gene-AC57_RS17535;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AC57_RS17535;old_locus_tag=AC57_1226 NZ_JJLR01000048.1 Protein Homology CDS 3422 4117 . - 0 ID=cds-WP_032237719.1;Parent=gene-AC57_RS17535;Dbxref=GenBank:WP_032237719.1;Name=WP_032237719.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=AC57_RS17535;product=septum site-determining protein MinC;protein_id=WP_032237719.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 4637 5005 . + . ID=gene-AC57_RS17530;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AC57_RS17530;old_locus_tag=AC57_1227 NZ_JJLR01000048.1 Protein Homology CDS 4637 5005 . + 0 ID=cds-WP_001056840.1;Parent=gene-AC57_RS17530;Dbxref=GenBank:WP_001056840.1;Name=WP_001056840.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415695.1;locus_tag=AC57_RS17530;product=YcgJ family protein;protein_id=WP_001056840.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 5108 5509 . - . ID=gene-AC57_RS17525;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AC57_RS17525;old_locus_tag=AC57_1228 NZ_JJLR01000048.1 Protein Homology CDS 5108 5509 . - 0 ID=cds-WP_000695215.1;Parent=gene-AC57_RS17525;Dbxref=GenBank:WP_000695215.1;Name=WP_000695215.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415696.1;locus_tag=AC57_RS17525;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695215.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 5751 6044 . + . ID=gene-AC57_RS17520;Name=AC57_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17520;old_locus_tag=AC57_1230 NZ_JJLR01000048.1 Protein Homology CDS 5751 6044 . + 0 ID=cds-WP_001295992.1;Parent=gene-AC57_RS17520;Dbxref=GenBank:WP_001295992.1;Name=WP_001295992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AC57_RS17520;product=YcgL domain-containing protein;protein_id=WP_001295992.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 6116 6775 . + . ID=gene-AC57_RS17515;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AC57_RS17515;old_locus_tag=AC57_1231 NZ_JJLR01000048.1 Protein Homology CDS 6116 6775 . + 0 ID=cds-WP_000284277.1;Parent=gene-AC57_RS17515;Dbxref=GenBank:WP_000284277.1;Name=WP_000284277.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=AC57_RS17515;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284277.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 6867 7313 . + . ID=gene-AC57_RS17510;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AC57_RS17510;old_locus_tag=AC57_1232 NZ_JJLR01000048.1 Protein Homology CDS 6867 7313 . + 0 ID=cds-WP_001306825.1;Parent=gene-AC57_RS17510;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AC57_RS17510;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 7520 8422 . - . ID=gene-AC57_RS17505;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=AC57_RS17505;old_locus_tag=AC57_1233 NZ_JJLR01000048.1 Protein Homology CDS 7520 8422 . - 0 ID=cds-WP_032279886.1;Parent=gene-AC57_RS17505;Dbxref=GenBank:WP_032279886.1;Name=WP_032279886.1;Ontology_term=GO:0044179,GO:0090729;gbkey=CDS;gene=hlyE;go_function=toxin activity|0090729||IEA;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AC57_RS17505;product=hemolysin HlyE;protein_id=WP_032279886.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 8795 9214 . + . ID=gene-AC57_RS17500;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AC57_RS17500;old_locus_tag=AC57_1234 NZ_JJLR01000048.1 Protein Homology CDS 8795 9214 . + 0 ID=cds-WP_000897378.1;Parent=gene-AC57_RS17500;Dbxref=GenBank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AC57_RS17500;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 9214 10482 . + . ID=gene-AC57_RS17495;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AC57_RS17495;old_locus_tag=AC57_1235 NZ_JJLR01000048.1 Protein Homology CDS 9214 10482 . + 0 ID=cds-WP_000457616.1;Parent=gene-AC57_RS17495;Dbxref=GenBank:WP_000457616.1;Name=WP_000457616.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AC57_RS17495;product=DNA polymerase V catalytic protein;protein_id=WP_000457616.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 10528 11058 . - . ID=gene-AC57_RS17490;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AC57_RS17490;old_locus_tag=AC57_1236 NZ_JJLR01000048.1 Protein Homology CDS 10528 11058 . - 0 ID=cds-WP_000943459.1;Parent=gene-AC57_RS17490;Dbxref=GenBank:WP_000943459.1;Name=WP_000943459.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=AC57_RS17490;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 11204 12745 . - . ID=gene-AC57_RS17485;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AC57_RS17485;old_locus_tag=AC57_1237 NZ_JJLR01000048.1 Protein Homology CDS 11204 12745 . - 0 ID=cds-WP_000406391.1;Parent=gene-AC57_RS17485;Dbxref=GenBank:WP_000406391.1;Name=WP_000406391.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AC57_RS17485;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_000406391.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 12966 13685 . + . ID=gene-AC57_RS17480;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AC57_RS17480;old_locus_tag=AC57_1238 NZ_JJLR01000048.1 Protein Homology CDS 12966 13685 . + 0 ID=cds-WP_000234823.1;Parent=gene-AC57_RS17480;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AC57_RS17480;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 13737 15269 . - . ID=gene-AC57_RS17475;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AC57_RS17475;old_locus_tag=AC57_1239 NZ_JJLR01000048.1 Protein Homology CDS 13737 15269 . - 0 ID=cds-WP_000190854.1;Parent=gene-AC57_RS17475;Dbxref=GenBank:WP_000190854.1;Name=WP_000190854.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415706.1;locus_tag=AC57_RS17475;product=SpoVR family protein;protein_id=WP_000190854.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 15599 16897 . + . ID=gene-AC57_RS17470;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AC57_RS17470;old_locus_tag=AC57_1240 NZ_JJLR01000048.1 Protein Homology CDS 15599 16897 . + 0 ID=cds-WP_001566340.1;Parent=gene-AC57_RS17470;Dbxref=GenBank:WP_001566340.1;Name=WP_001566340.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AC57_RS17470;product=D-amino acid dehydrogenase;protein_id=WP_001566340.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 16907 17977 . + . ID=gene-AC57_RS17465;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AC57_RS17465;old_locus_tag=AC57_1241 NZ_JJLR01000048.1 Protein Homology CDS 16907 17977 . + 0 ID=cds-WP_032237718.1;Parent=gene-AC57_RS17465;Dbxref=GenBank:WP_032237718.1;Name=WP_032237718.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309712.2;locus_tag=AC57_RS17465;product=catabolic alanine racemase DadX;protein_id=WP_032237718.1;transl_table=11 NZ_JJLR01000048.1 RefSeq pseudogene 18288 18428 . + . ID=gene-AC57_RS31190;Name=AC57_RS31190;end_range=18428,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31190;partial=true;pseudo=true NZ_JJLR01000048.1 Protein Homology CDS 18288 18428 . + 0 ID=cds-AC57_RS31190;Parent=gene-AC57_RS31190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=18428,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AC57_RS31190;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 18363 20099 . - . ID=gene-AC57_RS17460;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;locus_tag=AC57_RS17460;old_locus_tag=AC57_1243 NZ_JJLR01000048.1 Protein Homology CDS 18363 20099 . - 0 ID=cds-WP_000340194.1;Parent=gene-AC57_RS17460;Dbxref=GenBank:WP_000340194.1;Name=WP_000340194.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415709.2;locus_tag=AC57_RS17460;product=potassium/proton antiporter;protein_id=WP_000340194.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 20194 21108 . - . ID=gene-AC57_RS17455;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AC57_RS17455;old_locus_tag=AC57_1244 NZ_JJLR01000048.1 Protein Homology CDS 20194 21108 . - 0 ID=cds-WP_000051560.1;Parent=gene-AC57_RS17455;Dbxref=GenBank:WP_000051560.1;Name=WP_000051560.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415710.1;locus_tag=AC57_RS17455;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_000051560.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 21208 21819 . + . ID=gene-AC57_RS17450;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AC57_RS17450;old_locus_tag=AC57_1245 NZ_JJLR01000048.1 Protein Homology CDS 21208 21819 . + 0 ID=cds-WP_001301104.1;Parent=gene-AC57_RS17450;Dbxref=GenBank:WP_001301104.1;Name=WP_001301104.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415711.2;locus_tag=AC57_RS17450;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001301104.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 21821 22555 . - . ID=gene-AC57_RS17445;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AC57_RS17445;old_locus_tag=AC57_1246 NZ_JJLR01000048.1 Protein Homology CDS 21821 22555 . - 0 ID=cds-WP_000020163.1;Parent=gene-AC57_RS17445;Dbxref=GenBank:WP_000020163.1;Name=WP_000020163.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AC57_RS17445;product=flagellar brake protein YcgR;protein_id=WP_000020163.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 22756 23010 . + . ID=gene-AC57_RS17440;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AC57_RS17440;old_locus_tag=AC57_1247 NZ_JJLR01000048.1 Protein Homology CDS 22756 23010 . + 0 ID=cds-WP_000511313.1;Parent=gene-AC57_RS17440;Dbxref=GenBank:WP_000511313.1;Name=WP_000511313.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309719.1;locus_tag=AC57_RS17440;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511313.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 23188 23628 . + . ID=gene-AC57_RS17435;Name=ycgY;gbkey=Gene;gene=ycgY;gene_biotype=protein_coding;locus_tag=AC57_RS17435;old_locus_tag=AC57_1248 NZ_JJLR01000048.1 Protein Homology CDS 23188 23628 . + 0 ID=cds-WP_023281190.1;Parent=gene-AC57_RS17435;Dbxref=GenBank:WP_023281190.1;Name=WP_023281190.1;gbkey=CDS;gene=ycgY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415714.1;locus_tag=AC57_RS17435;product=protein YcgY;protein_id=WP_023281190.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 23707 25404 . - . ID=gene-AC57_RS17430;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AC57_RS17430;old_locus_tag=AC57_1249 NZ_JJLR01000048.1 Protein Homology CDS 23707 25404 . - 0 ID=cds-WP_000841714.1;Parent=gene-AC57_RS17430;Dbxref=GenBank:WP_000841714.1;Name=WP_000841714.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AC57_RS17430;product=alpha%2Calpha-trehalase;protein_id=WP_000841714.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 25724 27142 . - . ID=gene-AC57_RS17425;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AC57_RS17425;old_locus_tag=AC57_1250 NZ_JJLR01000048.1 Protein Homology CDS 25724 27142 . - 0 ID=cds-WP_032237717.1;Parent=gene-AC57_RS17425;Dbxref=GenBank:WP_032237717.1;Name=WP_032237717.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AC57_RS17425;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_032237717.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 27153 27785 . - . ID=gene-AC57_RS17420;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AC57_RS17420;old_locus_tag=AC57_1251 NZ_JJLR01000048.1 Protein Homology CDS 27153 27785 . - 0 ID=cds-WP_000059411.1;Parent=gene-AC57_RS17420;Dbxref=GenBank:WP_000059411.1;Name=WP_000059411.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415717.1;locus_tag=AC57_RS17420;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_000059411.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 27796 28866 . - . ID=gene-AC57_RS17415;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AC57_RS17415;old_locus_tag=AC57_1252 NZ_JJLR01000048.1 Protein Homology CDS 27796 28866 . - 0 ID=cds-WP_000733715.1;Parent=gene-AC57_RS17415;Dbxref=GenBank:WP_000733715.1;Name=WP_000733715.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415718.6;locus_tag=AC57_RS17415;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733715.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 29094 31013 . + . ID=gene-AC57_RS17410;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AC57_RS17410;old_locus_tag=AC57_1253 NZ_JJLR01000048.1 Protein Homology CDS 29094 31013 . + 0 ID=cds-WP_001499625.1;Parent=gene-AC57_RS17410;Dbxref=GenBank:WP_001499625.1;Name=WP_001499625.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AC57_RS17410;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_001499625.1;transl_table=11 NZ_JJLR01000048.1 RefSeq gene 31193 31432 . + . ID=gene-AC57_RS0123625;Name=AC57_RS0123625;end_range=31432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123625;old_locus_tag=AC57_1254;partial=true NZ_JJLR01000048.1 Protein Homology CDS 31193 31432 . + 0 ID=cds-WP_000179208.1-2;Parent=gene-AC57_RS0123625;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;end_range=31432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123625;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;transl_table=11 ##sequence-region NZ_JJLR01000049.1 1 18247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000049.1 RefSeq region 1 18247 . + . ID=NZ_JJLR01000049.1:1..18247;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000049.1 RefSeq gene 1 250 . + . ID=gene-AC57_RS17405;Name=AC57_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17405;old_locus_tag=AC57_1255;partial=true;start_range=.,1 NZ_JJLR01000049.1 Protein Homology CDS 1 250 . + 1 ID=cds-WP_000674744.1-4;Parent=gene-AC57_RS17405;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS17405;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;start_range=.,1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 265 3117 . - . ID=gene-AC57_RS17400;Name=ycgV;gbkey=Gene;gene=ycgV;gene_biotype=protein_coding;locus_tag=AC57_RS17400;old_locus_tag=AC57_1256 NZ_JJLR01000049.1 Protein Homology CDS 265 3117 . - 0 ID=cds-WP_032237897.1;Parent=gene-AC57_RS17400;Dbxref=GenBank:WP_032237897.1;Name=WP_032237897.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ycgV;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AC57_RS17400;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_032237897.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 3886 4977 . - . ID=gene-AC57_RS17390;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AC57_RS17390;old_locus_tag=AC57_1258 NZ_JJLR01000049.1 Protein Homology CDS 3886 4977 . - 0 ID=cds-WP_000505866.1;Parent=gene-AC57_RS17390;Dbxref=GenBank:WP_000505866.1;Name=WP_000505866.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AC57_RS17390;product=redox-regulated ATPase YchF;protein_id=WP_000505866.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 5094 5678 . - . ID=gene-AC57_RS17385;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AC57_RS17385;old_locus_tag=AC57_1259 NZ_JJLR01000049.1 Protein Homology CDS 5094 5678 . - 0 ID=cds-WP_032237898.1;Parent=gene-AC57_RS17385;Dbxref=GenBank:WP_032237898.1;Name=WP_032237898.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AC57_RS17385;product=aminoacyl-tRNA hydrolase;protein_id=WP_032237898.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 5956 6234 . + . ID=gene-AC57_RS17380;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AC57_RS17380;old_locus_tag=AC57_1260 NZ_JJLR01000049.1 Protein Homology CDS 5956 6234 . + 0 ID=cds-WP_000823885.1;Parent=gene-AC57_RS17380;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AC57_RS17380;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 6289 7968 . - . ID=gene-AC57_RS17375;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AC57_RS17375;old_locus_tag=AC57_1261 NZ_JJLR01000049.1 Protein Homology CDS 6289 7968 . - 0 ID=cds-WP_001033352.1;Parent=gene-AC57_RS17375;Dbxref=GenBank:WP_001033352.1;Name=WP_001033352.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AC57_RS17375;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_001033352.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 8093 9040 . - . ID=gene-AC57_RS17370;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AC57_RS17370;old_locus_tag=AC57_1262 NZ_JJLR01000049.1 Protein Homology CDS 8093 9040 . - 0 ID=cds-WP_001298109.1;Parent=gene-AC57_RS17370;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AC57_RS17370;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 9191 10042 . - . ID=gene-AC57_RS17365;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AC57_RS17365;old_locus_tag=AC57_1263 NZ_JJLR01000049.1 Protein Homology CDS 9191 10042 . - 0 ID=cds-WP_001260323.1;Parent=gene-AC57_RS17365;Dbxref=GenBank:WP_001260323.1;Name=WP_001260323.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707117.1;locus_tag=AC57_RS17365;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260323.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 10042 10665 . - . ID=gene-AC57_RS17360;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AC57_RS17360;old_locus_tag=AC57_1264 NZ_JJLR01000049.1 Protein Homology CDS 10042 10665 . - 0 ID=cds-WP_032237899.1;Parent=gene-AC57_RS17360;Dbxref=GenBank:WP_032237899.1;Name=WP_032237899.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AC57_RS17360;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_032237899.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 10879 12135 . + . ID=gene-AC57_RS17355;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AC57_RS17355;old_locus_tag=AC57_1265 NZ_JJLR01000049.1 Protein Homology CDS 10879 12135 . + 0 ID=cds-WP_001295619.1;Parent=gene-AC57_RS17355;Dbxref=GenBank:WP_001295619.1;Name=WP_001295619.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AC57_RS17355;product=glutamyl-tRNA reductase;protein_id=WP_001295619.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 12177 13259 . + . ID=gene-AC57_RS17350;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AC57_RS17350;old_locus_tag=AC57_1266 NZ_JJLR01000049.1 Protein Homology CDS 12177 13259 . + 0 ID=cds-WP_000804726.1;Parent=gene-AC57_RS17350;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AC57_RS17350;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 13259 14092 . + . ID=gene-AC57_RS17345;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AC57_RS17345;old_locus_tag=AC57_1267 NZ_JJLR01000049.1 Protein Homology CDS 13259 14092 . + 0 ID=cds-WP_000456454.1;Parent=gene-AC57_RS17345;Dbxref=GenBank:WP_000456454.1;Name=WP_000456454.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309744.1;locus_tag=AC57_RS17345;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456454.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 14089 14481 . + . ID=gene-AC57_RS17340;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AC57_RS17340;old_locus_tag=AC57_1268 NZ_JJLR01000049.1 Protein Homology CDS 14089 14481 . + 0 ID=cds-WP_000200373.1;Parent=gene-AC57_RS17340;Dbxref=GenBank:WP_000200373.1;Name=WP_000200373.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415731.1;locus_tag=AC57_RS17340;product=invasion regulator SirB2;protein_id=WP_000200373.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 14485 15294 . + . ID=gene-AC57_RS17335;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AC57_RS17335;old_locus_tag=AC57_1269 NZ_JJLR01000049.1 Protein Homology CDS 14485 15294 . + 0 ID=cds-WP_001257044.1;Parent=gene-AC57_RS17335;Dbxref=GenBank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AC57_RS17335;product=invasion regulator SirB1;protein_id=WP_001257044.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 15330 16184 . + . ID=gene-AC57_RS17330;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AC57_RS17330;old_locus_tag=AC57_1270 NZ_JJLR01000049.1 Protein Homology CDS 15330 16184 . + 0 ID=cds-WP_000811065.1;Parent=gene-AC57_RS17330;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AC57_RS17330;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 16331 16438 . - . ID=gene-AC57_RS17325;Name=AC57_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17325;old_locus_tag=AC57_1271 NZ_JJLR01000049.1 Protein Homology CDS 16331 16438 . - 0 ID=cds-WP_000170951.1;Parent=gene-AC57_RS17325;Dbxref=GenBank:WP_000170951.1;Name=WP_000170951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502614.1;locus_tag=AC57_RS17325;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170951.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 16866 16973 . - . ID=gene-AC57_RS17320;Name=AC57_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17320;old_locus_tag=AC57_1272 NZ_JJLR01000049.1 Protein Homology CDS 16866 16973 . - 0 ID=cds-WP_000170963.1;Parent=gene-AC57_RS17320;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AC57_RS17320;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11 NZ_JJLR01000049.1 RefSeq gene 17401 17508 . - . ID=gene-AC57_RS17315;Name=AC57_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17315;old_locus_tag=AC57_1273 NZ_JJLR01000049.1 Protein Homology CDS 17401 17508 . - 0 ID=cds-WP_000170965.1;Parent=gene-AC57_RS17315;Dbxref=GenBank:WP_000170965.1;Name=WP_000170965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AC57_RS17315;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170965.1;transl_table=11 NZ_JJLR01000049.1 RefSeq pseudogene 17712 18247 . + . ID=gene-AC57_RS17310;Name=AC57_RS17310;end_range=18247,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS17310;old_locus_tag=AC57_1274;partial=true;pseudo=true NZ_JJLR01000049.1 Protein Homology CDS 17712 18247 . + 0 ID=cds-AC57_RS17310;Parent=gene-AC57_RS17310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=18247,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS17310;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000050.1 1 45626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000050.1 RefSeq region 1 45626 . + . ID=NZ_JJLR01000050.1:1..45626;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000050.1 RefSeq pseudogene 1 153 . + . ID=gene-AC57_RS0123630;Name=AC57_RS0123630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123630;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000050.1 Protein Homology CDS 1 153 . + 0 ID=cds-AC57_RS0123630;Parent=gene-AC57_RS0123630;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0123630;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 591 1691 . - . ID=gene-AC57_RS17305;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AC57_RS17305;old_locus_tag=AC57_1275 NZ_JJLR01000050.1 Protein Homology CDS 591 1691 . - 0 ID=cds-WP_001563968.1;Parent=gene-AC57_RS17305;Dbxref=GenBank:WP_001563968.1;Name=WP_001563968.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309748.1;locus_tag=AC57_RS17305;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_001563968.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 1961 2191 . + . ID=gene-AC57_RS17300;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AC57_RS17300;old_locus_tag=AC57_1276 NZ_JJLR01000050.1 Protein Homology CDS 1961 2191 . + 0 ID=cds-WP_001146444.1;Parent=gene-AC57_RS17300;Dbxref=GenBank:WP_001146444.1;Name=WP_001146444.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AC57_RS17300;product=putative cation transport regulator ChaB;protein_id=WP_001146444.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 2349 3044 . + . ID=gene-AC57_RS17295;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AC57_RS17295;old_locus_tag=AC57_1277 NZ_JJLR01000050.1 Protein Homology CDS 2349 3044 . + 0 ID=cds-WP_001297117.1;Parent=gene-AC57_RS17295;Dbxref=GenBank:WP_001297117.1;Name=WP_001297117.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AC57_RS17295;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001297117.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 3088 3441 . - . ID=gene-AC57_RS17290;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AC57_RS17290;old_locus_tag=AC57_1278 NZ_JJLR01000050.1 Protein Homology CDS 3088 3441 . - 0 ID=cds-WP_001169669.1;Parent=gene-AC57_RS17290;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AC57_RS17290;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 3627 5021 . + . ID=gene-AC57_RS17285;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AC57_RS17285;old_locus_tag=AC57_1279 NZ_JJLR01000050.1 Protein Homology CDS 3627 5021 . + 0 ID=cds-WP_001400233.1;Parent=gene-AC57_RS17285;Dbxref=GenBank:WP_001400233.1;Name=WP_001400233.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AC57_RS17285;product=inverse autotransporter invasin YchO;protein_id=WP_001400233.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 5022 5672 . - . ID=gene-AC57_RS17280;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AC57_RS17280;old_locus_tag=AC57_1280 NZ_JJLR01000050.1 Protein Homology CDS 5022 5672 . - 0 ID=cds-WP_000070491.1;Parent=gene-AC57_RS17280;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AC57_RS17280;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 5665 7461 . - . ID=gene-AC57_RS17275;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AC57_RS17275;old_locus_tag=AC57_1281 NZ_JJLR01000050.1 Protein Homology CDS 5665 7461 . - 0 ID=cds-WP_000918073.1;Parent=gene-AC57_RS17275;Dbxref=GenBank:WP_000918073.1;Name=WP_000918073.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AC57_RS17275;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000918073.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 7800 9191 . + . ID=gene-AC57_RS17265;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AC57_RS17265;old_locus_tag=AC57_1283 NZ_JJLR01000050.1 Protein Homology CDS 7800 9191 . + 0 ID=cds-WP_000019827.1;Parent=gene-AC57_RS17265;Dbxref=GenBank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AC57_RS17265;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 9707 13450 . + . ID=gene-AC57_RS17260;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AC57_RS17260;old_locus_tag=AC57_1284 NZ_JJLR01000050.1 Protein Homology CDS 9707 13450 . + 0 ID=cds-WP_032279703.1;Parent=gene-AC57_RS17260;Dbxref=GenBank:WP_032279703.1;Name=WP_032279703.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=AC57_RS17260;product=nitrate reductase subunit alpha;protein_id=WP_032279703.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 13447 14985 . + . ID=gene-AC57_RS17255;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AC57_RS17255;old_locus_tag=AC57_1285 NZ_JJLR01000050.1 Protein Homology CDS 13447 14985 . + 0 ID=cds-WP_000702660.1;Parent=gene-AC57_RS17255;Dbxref=GenBank:WP_000702660.1;Name=WP_000702660.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309757.1;locus_tag=AC57_RS17255;product=nitrate reductase subunit beta;protein_id=WP_000702660.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 14982 15692 . + . ID=gene-AC57_RS17250;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AC57_RS17250;old_locus_tag=AC57_1286 NZ_JJLR01000050.1 Protein Homology CDS 14982 15692 . + 0 ID=cds-WP_000571699.1;Parent=gene-AC57_RS17250;Dbxref=GenBank:WP_000571699.1;Name=WP_000571699.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707135.1;locus_tag=AC57_RS17250;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571699.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 15692 16369 . + . ID=gene-AC57_RS17245;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AC57_RS17245;old_locus_tag=AC57_1287 NZ_JJLR01000050.1 Protein Homology CDS 15692 16369 . + 0 ID=cds-WP_001160110.1;Parent=gene-AC57_RS17245;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AC57_RS17245;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 16553 16684 . - . ID=gene-AC57_RS26000;Name=AC57_RS26000;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC57_RS26000 NZ_JJLR01000050.1 cmsearch ncRNA 16553 16684 . - . ID=rna-AC57_RS26000;Parent=gene-AC57_RS26000;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26000;product=RtT sRNA NZ_JJLR01000050.1 cmsearch exon 16553 16684 . - . ID=exon-AC57_RS26000-1;Parent=rna-AC57_RS26000;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26000;product=RtT sRNA NZ_JJLR01000050.1 RefSeq gene 16732 16863 . - . ID=gene-AC57_RS26005;Name=AC57_RS26005;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC57_RS26005 NZ_JJLR01000050.1 cmsearch ncRNA 16732 16863 . - . ID=rna-AC57_RS26005;Parent=gene-AC57_RS26005;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26005;product=RtT sRNA NZ_JJLR01000050.1 cmsearch exon 16732 16863 . - . ID=exon-AC57_RS26005-1;Parent=rna-AC57_RS26005;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26005;product=RtT sRNA NZ_JJLR01000050.1 RefSeq gene 16910 17041 . - . ID=gene-AC57_RS26010;Name=AC57_RS26010;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC57_RS26010 NZ_JJLR01000050.1 cmsearch ncRNA 16910 17041 . - . ID=rna-AC57_RS26010;Parent=gene-AC57_RS26010;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26010;product=RtT sRNA NZ_JJLR01000050.1 cmsearch exon 16910 17041 . - . ID=exon-AC57_RS26010-1;Parent=rna-AC57_RS26010;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26010;product=RtT sRNA NZ_JJLR01000050.1 RefSeq gene 17088 17172 . - . ID=gene-AC57_RS17235;Name=AC57_RS17235;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS17235;old_locus_tag=AC57_1290 NZ_JJLR01000050.1 tRNAscan-SE tRNA 17088 17172 . - . ID=rna-AC57_RS17235;Parent=gene-AC57_RS17235;anticodon=(pos:complement(17136..17138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS17235;product=tRNA-Tyr NZ_JJLR01000050.1 tRNAscan-SE exon 17088 17172 . - . ID=exon-AC57_RS17235-1;Parent=rna-AC57_RS17235;anticodon=(pos:complement(17136..17138));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS17235;product=tRNA-Tyr NZ_JJLR01000050.1 RefSeq gene 17207 17338 . - . ID=gene-AC57_RS26015;Name=AC57_RS26015;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC57_RS26015 NZ_JJLR01000050.1 cmsearch ncRNA 17207 17338 . - . ID=rna-AC57_RS26015;Parent=gene-AC57_RS26015;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26015;product=RtT sRNA NZ_JJLR01000050.1 cmsearch exon 17207 17338 . - . ID=exon-AC57_RS26015-1;Parent=rna-AC57_RS26015;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26015;product=RtT sRNA NZ_JJLR01000050.1 RefSeq gene 17382 17466 . - . ID=gene-AC57_RS17230;Name=AC57_RS17230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS17230;old_locus_tag=AC57_1291 NZ_JJLR01000050.1 tRNAscan-SE tRNA 17382 17466 . - . ID=rna-AC57_RS17230;Parent=gene-AC57_RS17230;anticodon=(pos:complement(17430..17432));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS17230;product=tRNA-Tyr NZ_JJLR01000050.1 tRNAscan-SE exon 17382 17466 . - . ID=exon-AC57_RS17230-1;Parent=rna-AC57_RS17230;anticodon=(pos:complement(17430..17432));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS17230;product=tRNA-Tyr NZ_JJLR01000050.1 RefSeq gene 17501 17632 . - . ID=gene-AC57_RS26020;Name=AC57_RS26020;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC57_RS26020 NZ_JJLR01000050.1 cmsearch ncRNA 17501 17632 . - . ID=rna-AC57_RS26020;Parent=gene-AC57_RS26020;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26020;product=RtT sRNA NZ_JJLR01000050.1 cmsearch exon 17501 17632 . - . ID=exon-AC57_RS26020-1;Parent=rna-AC57_RS26020;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26020;product=RtT sRNA NZ_JJLR01000050.1 RefSeq gene 17676 17760 . - . ID=gene-AC57_RS17225;Name=AC57_RS17225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS17225;old_locus_tag=AC57_1292 NZ_JJLR01000050.1 tRNAscan-SE tRNA 17676 17760 . - . ID=rna-AC57_RS17225;Parent=gene-AC57_RS17225;anticodon=(pos:complement(17724..17726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS17225;product=tRNA-Tyr NZ_JJLR01000050.1 tRNAscan-SE exon 17676 17760 . - . ID=exon-AC57_RS17225-1;Parent=rna-AC57_RS17225;anticodon=(pos:complement(17724..17726));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS17225;product=tRNA-Tyr NZ_JJLR01000050.1 RefSeq gene 17920 18762 . - . ID=gene-AC57_RS17220;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AC57_RS17220;old_locus_tag=AC57_1293 NZ_JJLR01000050.1 Protein Homology CDS 17920 18762 . - 0 ID=cds-WP_000555857.1;Parent=gene-AC57_RS17220;Dbxref=GenBank:WP_000555857.1;Name=WP_000555857.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415748.1;locus_tag=AC57_RS17220;product=formyltetrahydrofolate deformylase;protein_id=WP_000555857.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 18812 19270 . - . ID=gene-AC57_RS0123635;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AC57_RS0123635;old_locus_tag=AC57_1294 NZ_JJLR01000050.1 Protein Homology CDS 18812 19270 . - 0 ID=cds-WP_001307143.1;Parent=gene-AC57_RS0123635;Dbxref=GenBank:WP_001307143.1;Name=WP_001307143.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=AC57_RS0123635;product=YchJ family protein;protein_id=WP_001307143.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 19383 20288 . + . ID=gene-AC57_RS17215;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AC57_RS17215;old_locus_tag=AC57_1295 NZ_JJLR01000050.1 Protein Homology CDS 19383 20288 . + 0 ID=cds-WP_001295622.1;Parent=gene-AC57_RS17215;Dbxref=GenBank:WP_001295622.1;Name=WP_001295622.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AC57_RS17215;product=patatin-like phospholipase RssA;protein_id=WP_001295622.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 20380 21393 . + . ID=gene-AC57_RS17210;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AC57_RS17210;old_locus_tag=AC57_1296 NZ_JJLR01000050.1 Protein Homology CDS 20380 21393 . + 0 ID=cds-WP_000193447.1;Parent=gene-AC57_RS17210;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AC57_RS17210;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 21595 22503 . + . ID=gene-AC57_RS17205;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AC57_RS17205;old_locus_tag=AC57_1297 NZ_JJLR01000050.1 Protein Homology CDS 21595 22503 . + 0 ID=cds-WP_000718995.1;Parent=gene-AC57_RS17205;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AC57_RS17205;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 22647 23060 . - . ID=gene-AC57_RS17200;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AC57_RS17200;old_locus_tag=AC57_1298 NZ_JJLR01000050.1 Protein Homology CDS 22647 23060 . - 0 ID=cds-WP_001287378.1;Parent=gene-AC57_RS17200;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AC57_RS17200;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 23664 24281 . + . ID=gene-AC57_RS17195;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AC57_RS17195;old_locus_tag=AC57_1300 NZ_JJLR01000050.1 Protein Homology CDS 23664 24281 . + 0 ID=cds-WP_000068089.1;Parent=gene-AC57_RS17195;Dbxref=GenBank:WP_000068089.1;Name=WP_000068089.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309767.1;locus_tag=AC57_RS17195;product=thymidine kinase;protein_id=WP_000068089.1;transl_table=11 NZ_JJLR01000050.1 RefSeq pseudogene 24562 25458 . - . ID=gene-AC57_RS17190;Name=AC57_RS17190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS17190;old_locus_tag=AC57_1301;pseudo=true NZ_JJLR01000050.1 Protein Homology CDS 24562 25458 . - 0 ID=cds-AC57_RS17190;Parent=gene-AC57_RS17190;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AC57_RS17190;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 25582 28257 . - . ID=gene-AC57_RS17185;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AC57_RS17185;old_locus_tag=AC57_1304 NZ_JJLR01000050.1 Protein Homology CDS 25582 28257 . - 0 ID=cds-WP_000301651.1;Parent=gene-AC57_RS17185;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AC57_RS17185;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 28650 28703 . + . ID=gene-AC57_RS30490;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AC57_RS30490 NZ_JJLR01000050.1 Protein Homology CDS 28650 28703 . + 0 ID=cds-WP_211180492.1;Parent=gene-AC57_RS30490;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AC57_RS30490;product=protein YchT;protein_id=WP_211180492.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 28734 29381 . + . ID=gene-AC57_RS17180;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AC57_RS17180;old_locus_tag=AC57_1305 NZ_JJLR01000050.1 Protein Homology CDS 28734 29381 . + 0 ID=cds-WP_000616554.1;Parent=gene-AC57_RS17180;Dbxref=GenBank:WP_000616554.1;Name=WP_000616554.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415758.1;locus_tag=AC57_RS17180;product=NAAT family transporter YchE;protein_id=WP_000616554.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 29539 29700 . - . ID=gene-AC57_RS30210;Name=AC57_RS30210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30210;old_locus_tag=AC57_1306 NZ_JJLR01000050.1 GeneMarkS-2+ CDS 29539 29700 . - 0 ID=cds-WP_000021850.1;Parent=gene-AC57_RS30210;Dbxref=GenBank:WP_000021850.1;Name=WP_000021850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30210;product=hypothetical protein;protein_id=WP_000021850.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 30119 31750 . + . ID=gene-AC57_RS17175;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AC57_RS17175;old_locus_tag=AC57_1307 NZ_JJLR01000050.1 Protein Homology CDS 30119 31750 . + 0 ID=cds-WP_001297114.1;Parent=gene-AC57_RS17175;Dbxref=GenBank:WP_001297114.1;Name=WP_001297114.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AC57_RS17175;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_001297114.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 31836 32756 . + . ID=gene-AC57_RS17170;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AC57_RS17170;old_locus_tag=AC57_1308 NZ_JJLR01000050.1 Protein Homology CDS 31836 32756 . + 0 ID=cds-WP_000911112.1;Parent=gene-AC57_RS17170;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AC57_RS17170;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 32771 33679 . + . ID=gene-AC57_RS17165;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AC57_RS17165;old_locus_tag=AC57_1309 NZ_JJLR01000050.1 Protein Homology CDS 32771 33679 . + 0 ID=cds-WP_032237591.1;Parent=gene-AC57_RS17165;Dbxref=GenBank:WP_032237591.1;Name=WP_032237591.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AC57_RS17165;product=oligopeptide ABC transporter permease OppC;protein_id=WP_032237591.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 33691 34704 . + . ID=gene-AC57_RS17160;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AC57_RS17160;old_locus_tag=AC57_1310 NZ_JJLR01000050.1 Protein Homology CDS 33691 34704 . + 0 ID=cds-WP_000110945.1;Parent=gene-AC57_RS17160;Dbxref=GenBank:WP_000110945.1;Name=WP_000110945.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AC57_RS17160;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_000110945.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 34701 35705 . + . ID=gene-AC57_RS17155;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AC57_RS17155;old_locus_tag=AC57_1311 NZ_JJLR01000050.1 Protein Homology CDS 34701 35705 . + 0 ID=cds-WP_000994905.1;Parent=gene-AC57_RS17155;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AC57_RS17155;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 35758 36087 . - . ID=gene-AC57_RS17150;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AC57_RS17150;old_locus_tag=AC57_1312 NZ_JJLR01000050.1 Protein Homology CDS 35758 36087 . - 0 ID=cds-WP_000366959.1;Parent=gene-AC57_RS17150;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AC57_RS17150;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 36122 37582 . - . ID=gene-AC57_RS17145;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AC57_RS17145;old_locus_tag=AC57_1313 NZ_JJLR01000050.1 Protein Homology CDS 36122 37582 . - 0 ID=cds-WP_032237592.1;Parent=gene-AC57_RS17145;Dbxref=GenBank:WP_032237592.1;Name=WP_032237592.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AC57_RS17145;product=cardiolipin synthase;protein_id=WP_032237592.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 37725 37898 . + . ID=gene-AC57_RS29700;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AC57_RS29700 NZ_JJLR01000050.1 Protein Homology CDS 37725 37898 . + 0 ID=cds-WP_001309467.1;Parent=gene-AC57_RS29700;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AC57_RS29700;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 37953 39206 . - . ID=gene-AC57_RS17140;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AC57_RS17140;old_locus_tag=AC57_1314 NZ_JJLR01000050.1 Protein Homology CDS 37953 39206 . - 0 ID=cds-WP_000020078.1;Parent=gene-AC57_RS17140;Dbxref=GenBank:WP_000020078.1;Name=WP_000020078.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309777.1;locus_tag=AC57_RS17140;product=voltage-gated potassium channel protein;protein_id=WP_000020078.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 39506 39802 . - . ID=gene-AC57_RS17135;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AC57_RS17135;old_locus_tag=AC57_1315 NZ_JJLR01000050.1 Protein Homology CDS 39506 39802 . - 0 ID=cds-WP_000967595.1;Parent=gene-AC57_RS17135;Dbxref=GenBank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AC57_RS17135;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 40026 40745 . + . ID=gene-AC57_RS17130;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AC57_RS17130;old_locus_tag=AC57_1316 NZ_JJLR01000050.1 Protein Homology CDS 40026 40745 . + 0 ID=cds-WP_001300409.1;Parent=gene-AC57_RS17130;Dbxref=GenBank:WP_001300409.1;Name=WP_001300409.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415768.1;locus_tag=AC57_RS17130;product=TonB system transport protein TonB;protein_id=WP_001300409.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 40785 41183 . - . ID=gene-AC57_RS17125;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AC57_RS17125;old_locus_tag=AC57_1317 NZ_JJLR01000050.1 Protein Homology CDS 40785 41183 . - 0 ID=cds-WP_000108160.1;Parent=gene-AC57_RS17125;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AC57_RS17125;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 41288 41827 . - . ID=gene-AC57_RS17120;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AC57_RS17120;old_locus_tag=AC57_1318 NZ_JJLR01000050.1 Protein Homology CDS 41288 41827 . - 0 ID=cds-WP_000808667.1;Parent=gene-AC57_RS17120;Dbxref=GenBank:WP_000808667.1;Name=WP_000808667.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AC57_RS17120;product=septation protein A;protein_id=WP_000808667.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 41857 42600 . - . ID=gene-AC57_RS17115;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AC57_RS17115;old_locus_tag=AC57_1319 NZ_JJLR01000050.1 Protein Homology CDS 41857 42600 . - 0 ID=cds-WP_032237594.1;Parent=gene-AC57_RS17115;Dbxref=GenBank:WP_032237594.1;Name=WP_032237594.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AC57_RS17115;product=YciC family protein;protein_id=WP_032237594.1;transl_table=11 NZ_JJLR01000050.1 RefSeq pseudogene 42628 42717 . - . ID=gene-AC57_RS29705;Name=AC57_RS29705;end_range=42717,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29705;partial=true;pseudo=true NZ_JJLR01000050.1 Protein Homology CDS 42628 42717 . - 0 ID=cds-AC57_RS29705;Parent=gene-AC57_RS29705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=42717,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AC57_RS29705;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 42957 43595 . + . ID=gene-AC57_RS17110;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AC57_RS17110;old_locus_tag=AC57_1320 NZ_JJLR01000050.1 Protein Homology CDS 42957 43595 . + 0 ID=cds-WP_000737224.1;Parent=gene-AC57_RS17110;Dbxref=GenBank:WP_000737224.1;Name=WP_000737224.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=AC57_RS17110;product=outer membrane protein OmpW;protein_id=WP_000737224.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 43641 44771 . - . ID=gene-AC57_RS17105;Name=AC57_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17105;old_locus_tag=AC57_1321 NZ_JJLR01000050.1 Protein Homology CDS 43641 44771 . - 0 ID=cds-WP_000113674.1;Parent=gene-AC57_RS17105;Dbxref=GenBank:WP_000113674.1;Name=WP_000113674.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309784.1;locus_tag=AC57_RS17105;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_000113674.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 44749 44997 . - . ID=gene-AC57_RS0123650;Name=AC57_RS0123650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123650 NZ_JJLR01000050.1 Protein Homology CDS 44749 44997 . - 0 ID=cds-WP_000113189.1;Parent=gene-AC57_RS0123650;Dbxref=GenBank:WP_000113189.1;Name=WP_000113189.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309785.1;locus_tag=AC57_RS0123650;product=excisionase;protein_id=WP_000113189.1;transl_table=11 NZ_JJLR01000050.1 RefSeq gene 45062 45626 . - . ID=gene-AC57_RS17100;Name=AC57_RS17100;end_range=45626,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17100;old_locus_tag=AC57_1322;partial=true NZ_JJLR01000050.1 Protein Homology CDS 45062 45626 . - 1 ID=cds-WP_148725147.1;Parent=gene-AC57_RS17100;Dbxref=GenBank:WP_148725147.1;Name=WP_148725147.1;Ontology_term=GO:0003676,GO:0008408;end_range=45626,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AC57_RS17100;partial=true;product=3'-5' exonuclease;protein_id=WP_148725147.1;transl_table=11 ##sequence-region NZ_JJLR01000051.1 1 1204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000051.1 RefSeq region 1 1204 . + . ID=NZ_JJLR01000051.1:1..1204;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000051.1 RefSeq gene 1 194 . + . ID=gene-AC57_RS17095;Name=AC57_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17095;old_locus_tag=AC57_1323;partial=true;start_range=.,1 NZ_JJLR01000051.1 Protein Homology CDS 1 194 . + 2 ID=cds-WP_000718190.1;Parent=gene-AC57_RS17095;Dbxref=GenBank:WP_000718190.1;Name=WP_000718190.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS17095;partial=true;product=IS1 family transposase;protein_id=WP_000718190.1;start_range=.,1;transl_table=11 NZ_JJLR01000051.1 RefSeq gene 422 1108 . + . ID=gene-AC57_RS0123680;Name=AC57_RS0123680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123680;old_locus_tag=AC57_1324 NZ_JJLR01000051.1 Protein Homology CDS 422 1108 . + 0 ID=cds-WP_000009225.1-2;Parent=gene-AC57_RS0123680;Dbxref=GenBank:WP_000009225.1;Name=WP_000009225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232851.1;locus_tag=AC57_RS0123680;product=DUF2726 domain-containing protein;protein_id=WP_000009225.1;transl_table=11 ##sequence-region NZ_JJLR01000052.1 1 41964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000052.1 RefSeq region 1 41964 . + . ID=NZ_JJLR01000052.1:1..41964;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000052.1 RefSeq gene 1 249 . + . ID=gene-AC57_RS17090;Name=AC57_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS17090;old_locus_tag=AC57_1325;partial=true;start_range=.,1 NZ_JJLR01000052.1 Protein Homology CDS 1 249 . + 0 ID=cds-WP_000674744.1-5;Parent=gene-AC57_RS17090;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS17090;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;start_range=.,1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 616 1422 . - . ID=gene-AC57_RS17085;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AC57_RS17085;old_locus_tag=AC57_1326 NZ_JJLR01000052.1 Protein Homology CDS 616 1422 . - 0 ID=cds-WP_000443067.1;Parent=gene-AC57_RS17085;Dbxref=GenBank:WP_000443067.1;Name=WP_000443067.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AC57_RS17085;product=tryptophan synthase subunit alpha;protein_id=WP_000443067.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 1422 2615 . - . ID=gene-AC57_RS17080;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AC57_RS17080;old_locus_tag=AC57_1327 NZ_JJLR01000052.1 Protein Homology CDS 1422 2615 . - 0 ID=cds-WP_000209520.1;Parent=gene-AC57_RS17080;Dbxref=GenBank:WP_000209520.1;Name=WP_000209520.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415777.1;locus_tag=AC57_RS17080;product=tryptophan synthase subunit beta;protein_id=WP_000209520.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 2627 3988 . - . ID=gene-AC57_RS17075;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AC57_RS17075;old_locus_tag=AC57_1328 NZ_JJLR01000052.1 Protein Homology CDS 2627 3988 . - 0 ID=cds-WP_074518923.1;Parent=gene-AC57_RS17075;Dbxref=GenBank:WP_074518923.1;Name=WP_074518923.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415778.3;locus_tag=AC57_RS17075;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_074518923.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 3989 5584 . - . ID=gene-AC57_RS17070;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AC57_RS17070;old_locus_tag=AC57_1329 NZ_JJLR01000052.1 Protein Homology CDS 3989 5584 . - 0 ID=cds-WP_000763511.1;Parent=gene-AC57_RS17070;Dbxref=GenBank:WP_000763511.1;Name=WP_000763511.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AC57_RS17070;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763511.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 5584 7146 . - . ID=gene-AC57_RS17065;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AC57_RS17065;old_locus_tag=AC57_1330 NZ_JJLR01000052.1 Protein Homology CDS 5584 7146 . - 0 ID=cds-WP_001752448.1;Parent=gene-AC57_RS17065;Dbxref=GenBank:WP_001752448.1;Name=WP_001752448.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415780.1;locus_tag=AC57_RS17065;product=anthranilate synthase component I;protein_id=WP_001752448.1;transl_table=11 NZ_JJLR01000052.1 cmsearch sequence_feature 7168 7261 . - . ID=id-NZ_JJLR01000052.1:7168..7261;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLR01000052.1 RefSeq gene 7238 7282 . - . ID=gene-AC57_RS26885;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AC57_RS26885 NZ_JJLR01000052.1 Protein Homology CDS 7238 7282 . - 0 ID=cds-WP_001700591.1;Parent=gene-AC57_RS26885;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AC57_RS26885;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 7420 8301 . + . ID=gene-AC57_RS17060;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AC57_RS17060;old_locus_tag=AC57_1331 NZ_JJLR01000052.1 Protein Homology CDS 7420 8301 . + 0 ID=cds-WP_001285663.1;Parent=gene-AC57_RS17060;Dbxref=GenBank:WP_001285663.1;Name=WP_001285663.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415782.1;locus_tag=AC57_RS17060;product=RNase RNM;protein_id=WP_001285663.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 8298 8918 . + . ID=gene-AC57_RS17055;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AC57_RS17055;old_locus_tag=AC57_1332 NZ_JJLR01000052.1 Protein Homology CDS 8298 8918 . + 0 ID=cds-WP_001295575.1;Parent=gene-AC57_RS17055;Dbxref=GenBank:WP_001295575.1;Name=WP_001295575.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AC57_RS17055;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001295575.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 8946 10841 . + . ID=gene-AC57_RS17050;Name=yciQ;gbkey=Gene;gene=yciQ;gene_biotype=protein_coding;locus_tag=AC57_RS17050;old_locus_tag=AC57_1333 NZ_JJLR01000052.1 Protein Homology CDS 8946 10841 . + 0 ID=cds-WP_001301109.1;Parent=gene-AC57_RS17050;Dbxref=GenBank:WP_001301109.1;Name=WP_001301109.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yciQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415784.1;locus_tag=AC57_RS17050;product=DUF2207 domain-containing protein;protein_id=WP_001301109.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 11054 11929 . + . ID=gene-AC57_RS17045;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AC57_RS17045;old_locus_tag=AC57_1334 NZ_JJLR01000052.1 Protein Homology CDS 11054 11929 . + 0 ID=cds-WP_001291217.1;Parent=gene-AC57_RS17045;Dbxref=GenBank:WP_001291217.1;Name=WP_001291217.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415785.1;locus_tag=AC57_RS17045;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291217.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 11969 12559 . - . ID=gene-AC57_RS17040;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AC57_RS17040;old_locus_tag=AC57_1335 NZ_JJLR01000052.1 Protein Homology CDS 11969 12559 . - 0 ID=cds-WP_001278907.1;Parent=gene-AC57_RS17040;Dbxref=GenBank:WP_001278907.1;Name=WP_001278907.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AC57_RS17040;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278907.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 12556 13314 . - . ID=gene-AC57_RS17035;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AC57_RS17035;old_locus_tag=AC57_1336 NZ_JJLR01000052.1 Protein Homology CDS 12556 13314 . - 0 ID=cds-WP_000559280.1;Parent=gene-AC57_RS17035;Dbxref=GenBank:WP_000559280.1;Name=WP_000559280.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309870.1;locus_tag=AC57_RS17035;product=YciK family oxidoreductase;protein_id=WP_000559280.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 13534 14583 . + . ID=gene-AC57_RS17030;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AC57_RS17030;old_locus_tag=AC57_1337 NZ_JJLR01000052.1 Protein Homology CDS 13534 14583 . + 0 ID=cds-WP_000422045.1;Parent=gene-AC57_RS17030;Dbxref=GenBank:WP_000422045.1;Name=WP_000422045.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415788.1;locus_tag=AC57_RS17030;product=protease SohB;protein_id=WP_000422045.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 14619 14870 . - . ID=gene-AC57_RS17025;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AC57_RS17025;old_locus_tag=AC57_1338 NZ_JJLR01000052.1 Protein Homology CDS 14619 14870 . - 0 ID=cds-WP_001031530.1;Parent=gene-AC57_RS17025;Dbxref=GenBank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AC57_RS17025;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 15250 17847 . + . ID=gene-AC57_RS17020;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AC57_RS17020;old_locus_tag=AC57_1339 NZ_JJLR01000052.1 Protein Homology CDS 15250 17847 . + 0 ID=cds-WP_001297122.1;Parent=gene-AC57_RS17020;Dbxref=GenBank:WP_001297122.1;Name=WP_001297122.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AC57_RS17020;product=type I DNA topoisomerase;protein_id=WP_001297122.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 18057 19031 . + . ID=gene-AC57_RS17015;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AC57_RS17015;old_locus_tag=AC57_1340 NZ_JJLR01000052.1 Protein Homology CDS 18057 19031 . + 0 ID=cds-WP_000776253.1;Parent=gene-AC57_RS17015;Dbxref=GenBank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AC57_RS17015;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 19350 19490 . + . ID=gene-AC57_RS17010;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AC57_RS17010;old_locus_tag=AC57_1341 NZ_JJLR01000052.1 Protein Homology CDS 19350 19490 . + 0 ID=cds-WP_001300896.1;Parent=gene-AC57_RS17010;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AC57_RS17010;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 19493 19660 . + . ID=gene-AC57_RS17005;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=AC57_RS17005;old_locus_tag=AC57_1342 NZ_JJLR01000052.1 Protein Homology CDS 19493 19660 . + 0 ID=cds-WP_001297116.1;Parent=gene-AC57_RS17005;Dbxref=GenBank:WP_001297116.1;Name=WP_001297116.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588450.2;locus_tag=AC57_RS17005;product=protein YciX;protein_id=WP_001297116.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 19774 19869 . + . ID=gene-AC57_RS29715;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AC57_RS29715 NZ_JJLR01000052.1 Protein Homology CDS 19774 19869 . + 0 ID=cds-WP_001310756.1;Parent=gene-AC57_RS29715;Dbxref=GenBank:WP_001310756.1;Name=WP_001310756.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AC57_RS29715;product=small membrane protein YmiC;protein_id=WP_001310756.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 20033 22708 . + . ID=gene-AC57_RS17000;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AC57_RS17000;old_locus_tag=AC57_1343 NZ_JJLR01000052.1 Protein Homology CDS 20033 22708 . + 0 ID=cds-WP_000099534.1;Parent=gene-AC57_RS17000;Dbxref=GenBank:WP_000099534.1;Name=WP_000099534.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415792.1;locus_tag=AC57_RS17000;product=aconitate hydratase AcnA;protein_id=WP_000099534.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 22772 23362 . - . ID=gene-AC57_RS16995;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AC57_RS16995;old_locus_tag=AC57_1344 NZ_JJLR01000052.1 Protein Homology CDS 22772 23362 . - 0 ID=cds-WP_001176295.1;Parent=gene-AC57_RS16995;Dbxref=GenBank:WP_001176295.1;Name=WP_001176295.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AC57_RS16995;product=GTP cyclohydrolase II;protein_id=WP_001176295.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 23532 24296 . + . ID=gene-AC57_RS16990;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AC57_RS16990;old_locus_tag=AC57_1345 NZ_JJLR01000052.1 Protein Homology CDS 23532 24296 . + 0 ID=cds-WP_001256538.1;Parent=gene-AC57_RS16990;Dbxref=GenBank:WP_001256538.1;Name=WP_001256538.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AC57_RS16990;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 24445 24753 . + . ID=gene-AC57_RS16985;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AC57_RS16985;old_locus_tag=AC57_1346 NZ_JJLR01000052.1 Protein Homology CDS 24445 24753 . + 0 ID=cds-WP_000876286.1;Parent=gene-AC57_RS16985;Dbxref=GenBank:WP_000876286.1;Name=WP_000876286.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415795.1;locus_tag=AC57_RS16985;product=lipopolysaccharide assembly protein LapA;protein_id=WP_000876286.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 24760 25929 . + . ID=gene-AC57_RS16980;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AC57_RS16980;old_locus_tag=AC57_1347 NZ_JJLR01000052.1 Protein Homology CDS 24760 25929 . + 0 ID=cds-WP_000891353.1;Parent=gene-AC57_RS16980;Dbxref=GenBank:WP_000891353.1;Name=WP_000891353.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AC57_RS16980;product=lipopolysaccharide assembly protein LapB;protein_id=WP_000891353.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 26123 26860 . + . ID=gene-AC57_RS16975;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AC57_RS16975;old_locus_tag=AC57_1349 NZ_JJLR01000052.1 Protein Homology CDS 26123 26860 . + 0 ID=cds-WP_000176270.1;Parent=gene-AC57_RS16975;Dbxref=GenBank:WP_000176270.1;Name=WP_000176270.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AC57_RS16975;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_000176270.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 26860 27186 . + . ID=gene-AC57_RS16970;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AC57_RS16970;old_locus_tag=AC57_1350 NZ_JJLR01000052.1 Protein Homology CDS 26860 27186 . + 0 ID=cds-WP_001295580.1;Parent=gene-AC57_RS16970;Dbxref=GenBank:WP_001295580.1;Name=WP_001295580.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AC57_RS16970;product=stress response translation initiation inhibitor YciH;protein_id=WP_001295580.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 27312 27530 . - . ID=gene-AC57_RS16965;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AC57_RS16965;old_locus_tag=AC57_1351 NZ_JJLR01000052.1 Protein Homology CDS 27312 27530 . - 0 ID=cds-WP_000498253.1;Parent=gene-AC57_RS16965;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AC57_RS16965;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 27799 28548 . - . ID=gene-AC57_RS16960;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=AC57_RS16960;old_locus_tag=AC57_1352 NZ_JJLR01000052.1 Protein Homology CDS 27799 28548 . - 0 ID=cds-WP_001088621.1;Parent=gene-AC57_RS16960;Dbxref=GenBank:WP_001088621.1;Name=WP_001088621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AC57_RS16960;product=DNA-binding transcriptional regulator YciT;protein_id=WP_001088621.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 28638 28811 . - . ID=gene-AC57_RS16955;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AC57_RS16955;old_locus_tag=AC57_1353 NZ_JJLR01000052.1 Protein Homology CDS 28638 28811 . - 0 ID=cds-WP_001288368.1;Parent=gene-AC57_RS16955;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AC57_RS16955;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 28848 28976 . + . ID=gene-AC57_RS30495;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AC57_RS30495 NZ_JJLR01000052.1 Protein Homology CDS 28848 28976 . + 0 ID=cds-WP_023157074.1;Parent=gene-AC57_RS30495;Dbxref=GenBank:WP_023157074.1;Name=WP_023157074.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AC57_RS30495;product=protein YmiD;protein_id=WP_023157074.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 28958 30943 . - . ID=gene-AC57_RS16950;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AC57_RS16950;old_locus_tag=AC57_1354 NZ_JJLR01000052.1 Protein Homology CDS 28958 30943 . - 0 ID=cds-WP_000859983.1;Parent=gene-AC57_RS16950;Dbxref=GenBank:WP_000859983.1;Name=WP_000859983.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309885.1;locus_tag=AC57_RS16950;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000859983.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 30997 31101 . + . ID=gene-AC57_RS0123705;Name=AC57_RS0123705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123705 NZ_JJLR01000052.1 Protein Homology CDS 30997 31101 . + 0 ID=cds-WP_000221855.1;Parent=gene-AC57_RS0123705;Dbxref=GenBank:WP_000221855.1;Name=WP_000221855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AC57_RS0123705;product=hypothetical protein;protein_id=WP_000221855.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 31178 33112 . - . ID=gene-AC57_RS16945;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AC57_RS16945;old_locus_tag=AC57_1355 NZ_JJLR01000052.1 Protein Homology CDS 31178 33112 . - 0 ID=cds-WP_000484985.1;Parent=gene-AC57_RS16945;Dbxref=GenBank:WP_000484985.1;Name=WP_000484985.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415802.1;locus_tag=AC57_RS16945;product=exoribonuclease II;protein_id=WP_000484985.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 33180 34307 . - . ID=gene-AC57_RS16940;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AC57_RS16940;old_locus_tag=AC57_1356 NZ_JJLR01000052.1 Protein Homology CDS 33180 34307 . - 0 ID=cds-WP_001335988.1;Parent=gene-AC57_RS16940;Dbxref=GenBank:WP_001335988.1;Name=WP_001335988.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415803.2;locus_tag=AC57_RS16940;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_001335988.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 34451 35239 . - . ID=gene-AC57_RS16935;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AC57_RS16935;old_locus_tag=AC57_1357 NZ_JJLR01000052.1 Protein Homology CDS 34451 35239 . - 0 ID=cds-WP_000506490.1;Parent=gene-AC57_RS16935;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AC57_RS16935;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 35609 35962 . - . ID=gene-AC57_RS16930;Name=ycjD;gbkey=Gene;gene=ycjD;gene_biotype=protein_coding;locus_tag=AC57_RS16930;old_locus_tag=AC57_1358 NZ_JJLR01000052.1 Protein Homology CDS 35609 35962 . - 0 ID=cds-WP_000968857.1;Parent=gene-AC57_RS16930;Dbxref=GenBank:WP_000968857.1;Name=WP_000968857.1;gbkey=CDS;gene=ycjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415805.1;locus_tag=AC57_RS16930;product=DUF559 domain-containing protein;protein_id=WP_000968857.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 36030 36836 . - . ID=gene-AC57_RS16925;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AC57_RS16925;old_locus_tag=AC57_1359 NZ_JJLR01000052.1 Protein Homology CDS 36030 36836 . - 0 ID=cds-WP_000573407.1;Parent=gene-AC57_RS16925;Dbxref=GenBank:WP_000573407.1;Name=WP_000573407.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=AC57_RS16925;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_000573407.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 36838 37830 . - . ID=gene-AC57_RS16920;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AC57_RS16920;old_locus_tag=AC57_1360 NZ_JJLR01000052.1 Protein Homology CDS 36838 37830 . - 0 ID=cds-WP_001128858.1;Parent=gene-AC57_RS16920;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AC57_RS16920;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 37830 38720 . - . ID=gene-AC57_RS16915;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AC57_RS16915;old_locus_tag=AC57_1361 NZ_JJLR01000052.1 Protein Homology CDS 37830 38720 . - 0 ID=cds-WP_001146163.1;Parent=gene-AC57_RS16915;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AC57_RS16915;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 38707 39672 . - . ID=gene-AC57_RS16910;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AC57_RS16910;old_locus_tag=AC57_1362 NZ_JJLR01000052.1 Protein Homology CDS 38707 39672 . - 0 ID=cds-WP_000583277.1;Parent=gene-AC57_RS16910;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AC57_RS16910;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JJLR01000052.1 RefSeq gene 39669 41312 . - . ID=gene-AC57_RS16905;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AC57_RS16905;old_locus_tag=AC57_1363 NZ_JJLR01000052.1 Protein Homology CDS 39669 41312 . - 0 ID=cds-WP_032279782.1;Parent=gene-AC57_RS16905;Dbxref=GenBank:WP_032279782.1;Name=WP_032279782.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AC57_RS16905;product=ABC transporter substrate-binding protein SapA;protein_id=WP_032279782.1;transl_table=11 NZ_JJLR01000052.1 RefSeq pseudogene 41625 41687 . - . ID=gene-AC57_RS29720;Name=AC57_RS29720;end_range=41687,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29720;partial=true;pseudo=true NZ_JJLR01000052.1 Protein Homology CDS 41625 41687 . - 0 ID=cds-AC57_RS29720;Parent=gene-AC57_RS29720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309899.1;locus_tag=AC57_RS29720;partial=true;product=DUF2543 family protein;pseudo=true;transl_table=11 NZ_JJLR01000052.1 RefSeq pseudogene 41742 41964 . + . ID=gene-AC57_RS16900;Name=AC57_RS16900;end_range=41964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS16900;old_locus_tag=AC57_1365;partial=true;pseudo=true NZ_JJLR01000052.1 Protein Homology CDS 41742 41964 . + 0 ID=cds-AC57_RS16900;Parent=gene-AC57_RS16900;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=41964,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS16900;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000053.1 1 47478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000053.1 RefSeq region 1 47478 . + . ID=NZ_JJLR01000053.1:1..47478;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000053.1 RefSeq pseudogene 1 167 . + . ID=gene-AC57_RS30215;Name=AC57_RS30215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30215;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000053.1 Protein Homology CDS 1 167 . + 2 ID=cds-AC57_RS30215;Parent=gene-AC57_RS30215;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30215;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 278 532 . - . ID=gene-AC57_RS16895;Name=AC57_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16895;old_locus_tag=AC57_1366 NZ_JJLR01000053.1 Protein Homology CDS 278 532 . - 0 ID=cds-WP_032279746.1;Parent=gene-AC57_RS16895;Dbxref=GenBank:WP_032279746.1;Name=WP_032279746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=AC57_RS16895;product=DUF2543 family protein;protein_id=WP_032279746.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 666 2051 . - . ID=gene-AC57_RS16890;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AC57_RS16890;old_locus_tag=AC57_1367 NZ_JJLR01000053.1 Protein Homology CDS 666 2051 . - 0 ID=cds-WP_032285668.1;Parent=gene-AC57_RS16890;Dbxref=GenBank:WP_032285668.1;Name=WP_032285668.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415812.4;locus_tag=AC57_RS16890;product=putrescine/proton symporter PuuP;protein_id=WP_032285668.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 2041 2205 . - . ID=gene-AC57_RS29725;Name=AC57_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29725 NZ_JJLR01000053.1 Protein Homology CDS 2041 2205 . - 0 ID=cds-WP_148725148.1;Parent=gene-AC57_RS29725;Dbxref=GenBank:WP_148725148.1;Name=WP_148725148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AC57_RS29725;product=hypothetical protein;protein_id=WP_148725148.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 2354 3772 . - . ID=gene-AC57_RS16885;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AC57_RS16885;old_locus_tag=AC57_1368 NZ_JJLR01000053.1 Protein Homology CDS 2354 3772 . - 0 ID=cds-WP_032246362.1;Parent=gene-AC57_RS16885;Dbxref=GenBank:WP_032246362.1;Name=WP_032246362.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415813.4;locus_tag=AC57_RS16885;product=glutamate-putrescine ligase;protein_id=WP_032246362.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 3984 4748 . + . ID=gene-AC57_RS16880;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AC57_RS16880;old_locus_tag=AC57_1369 NZ_JJLR01000053.1 Protein Homology CDS 3984 4748 . + 0 ID=cds-WP_001300506.1;Parent=gene-AC57_RS16880;Dbxref=GenBank:WP_001300506.1;Name=WP_001300506.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AC57_RS16880;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001300506.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 4775 5332 . + . ID=gene-AC57_RS16875;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AC57_RS16875;old_locus_tag=AC57_1370 NZ_JJLR01000053.1 Protein Homology CDS 4775 5332 . + 0 ID=cds-WP_032279747.1;Parent=gene-AC57_RS16875;Dbxref=GenBank:WP_032279747.1;Name=WP_032279747.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AC57_RS16875;product=HTH-type transcriptional regulator PuuR;protein_id=WP_032279747.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 5607 7094 . + . ID=gene-AC57_RS16870;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AC57_RS16870;old_locus_tag=AC57_1371 NZ_JJLR01000053.1 Protein Homology CDS 5607 7094 . + 0 ID=cds-WP_001009090.1;Parent=gene-AC57_RS16870;Dbxref=GenBank:WP_001009090.1;Name=WP_001009090.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AC57_RS16870;product=aldehyde dehydrogenase PuuC;protein_id=WP_001009090.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 7096 8376 . + . ID=gene-AC57_RS16865;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AC57_RS16865;old_locus_tag=AC57_1372 NZ_JJLR01000053.1 Protein Homology CDS 7096 8376 . + 0 ID=cds-WP_000134870.1;Parent=gene-AC57_RS16865;Dbxref=GenBank:WP_000134870.1;Name=WP_000134870.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AC57_RS16865;product=gamma-glutamylputrescine oxidase;protein_id=WP_000134870.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 8414 9679 . + . ID=gene-AC57_RS16860;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AC57_RS16860;old_locus_tag=AC57_1373 NZ_JJLR01000053.1 Protein Homology CDS 8414 9679 . + 0 ID=cds-WP_032237224.1;Parent=gene-AC57_RS16860;Dbxref=GenBank:WP_032237224.1;Name=WP_032237224.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415818.1;locus_tag=AC57_RS16860;product=4-aminobutyrate transaminase;protein_id=WP_032237224.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 9799 10776 . - . ID=gene-AC57_RS16855;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AC57_RS16855;old_locus_tag=AC57_1374 NZ_JJLR01000053.1 Protein Homology CDS 9799 10776 . - 0 ID=cds-WP_000852835.1;Parent=gene-AC57_RS16855;Dbxref=GenBank:WP_000852835.1;Name=WP_000852835.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=AC57_RS16855;product=phage shock protein operon transcriptional activator;protein_id=WP_000852835.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 10943 11611 . + . ID=gene-AC57_RS16850;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AC57_RS16850;old_locus_tag=AC57_1375 NZ_JJLR01000053.1 Protein Homology CDS 10943 11611 . + 0 ID=cds-WP_032279748.1;Parent=gene-AC57_RS16850;Dbxref=GenBank:WP_032279748.1;Name=WP_032279748.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AC57_RS16850;product=phage shock protein PspA;protein_id=WP_032279748.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 11665 11889 . + . ID=gene-AC57_RS16845;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AC57_RS16845;old_locus_tag=AC57_1376 NZ_JJLR01000053.1 Protein Homology CDS 11665 11889 . + 0 ID=cds-WP_001274963.1;Parent=gene-AC57_RS16845;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AC57_RS16845;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 11889 12248 . + . ID=gene-AC57_RS16840;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AC57_RS16840;old_locus_tag=AC57_1377 NZ_JJLR01000053.1 Protein Homology CDS 11889 12248 . + 0 ID=cds-WP_000907387.1;Parent=gene-AC57_RS16840;Dbxref=GenBank:WP_000907387.1;Name=WP_000907387.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AC57_RS16840;product=envelope stress response membrane protein PspC;protein_id=WP_000907387.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 12257 12478 . + . ID=gene-AC57_RS16835;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AC57_RS16835;old_locus_tag=AC57_1378 NZ_JJLR01000053.1 Protein Homology CDS 12257 12478 . + 0 ID=cds-WP_001295585.1;Parent=gene-AC57_RS16835;Dbxref=GenBank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AC57_RS16835;product=phage shock protein PspD;protein_id=WP_001295585.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 12553 12867 . + . ID=gene-AC57_RS16830;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AC57_RS16830;old_locus_tag=AC57_1379 NZ_JJLR01000053.1 Protein Homology CDS 12553 12867 . + 0 ID=cds-WP_000473109.1;Parent=gene-AC57_RS16830;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AC57_RS16830;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 13080 14759 . + . ID=gene-AC57_RS16825;Name=ycjM;gbkey=Gene;gene=ycjM;gene_biotype=protein_coding;locus_tag=AC57_RS16825;old_locus_tag=AC57_1380 NZ_JJLR01000053.1 Protein Homology CDS 13080 14759 . + 0 ID=cds-WP_000810500.1;Parent=gene-AC57_RS16825;Dbxref=GenBank:WP_000810500.1;Name=WP_000810500.1;gbkey=CDS;gene=ycjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415825.4;locus_tag=AC57_RS16825;product=glucosylglycerate phosphorylase;protein_id=WP_000810500.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 14773 16065 . + . ID=gene-AC57_RS16820;Name=ycjN;gbkey=Gene;gene=ycjN;gene_biotype=protein_coding;locus_tag=AC57_RS16820;old_locus_tag=AC57_1381 NZ_JJLR01000053.1 Protein Homology CDS 14773 16065 . + 0 ID=cds-WP_032237222.1;Parent=gene-AC57_RS16820;Dbxref=GenBank:WP_032237222.1;Name=WP_032237222.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ycjN;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415826.1;locus_tag=AC57_RS16820;product=ABC transporter substrate-binding protein;protein_id=WP_032237222.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 16086 16967 . + . ID=gene-AC57_RS16815;Name=ycjO;gbkey=Gene;gene=ycjO;gene_biotype=protein_coding;locus_tag=AC57_RS16815;old_locus_tag=AC57_1382 NZ_JJLR01000053.1 Protein Homology CDS 16086 16967 . + 0 ID=cds-WP_032279749.1;Parent=gene-AC57_RS16815;Dbxref=GenBank:WP_032279749.1;Name=WP_032279749.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;gene=ycjO;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=AC57_RS16815;product=carbohydrate ABC transporter permease;protein_id=WP_032279749.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 16954 17796 . + . ID=gene-AC57_RS16810;Name=ycjP;gbkey=Gene;gene=ycjP;gene_biotype=protein_coding;locus_tag=AC57_RS16810;old_locus_tag=AC57_1383 NZ_JJLR01000053.1 Protein Homology CDS 16954 17796 . + 0 ID=cds-WP_032231058.1;Parent=gene-AC57_RS16810;Dbxref=GenBank:WP_032231058.1;Name=WP_032231058.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;gene=ycjP;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415828.1;locus_tag=AC57_RS16810;product=carbohydrate ABC transporter permease;protein_id=WP_032231058.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 17827 18879 . + . ID=gene-AC57_RS16805;Name=ycjQ;gbkey=Gene;gene=ycjQ;gene_biotype=protein_coding;locus_tag=AC57_RS16805;old_locus_tag=AC57_1384 NZ_JJLR01000053.1 Protein Homology CDS 17827 18879 . + 0 ID=cds-WP_000737347.1;Parent=gene-AC57_RS16805;Dbxref=GenBank:WP_000737347.1;Name=WP_000737347.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ycjQ;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=AC57_RS16805;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000737347.1;transl_table=11 NZ_JJLR01000053.1 RefSeq pseudogene 18898 19473 . + . ID=gene-AC57_RS31195;Name=AC57_RS31195;end_range=19473,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31195;old_locus_tag=AC57_1385;partial=true;pseudo=true NZ_JJLR01000053.1 Protein Homology CDS 18898 19473 . + 0 ID=cds-AC57_RS31195;Parent=gene-AC57_RS31195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824,GO:0016853;end_range=19473,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=AC57_RS31195;partial=true;product=sugar phosphate isomerase/epimerase family protein;pseudo=true;transl_table=11 NZ_JJLR01000053.1 RefSeq pseudogene 19468 20643 . + . ID=gene-AC57_RS28840;Name=ycjT;gbkey=Gene;gene=ycjT;gene_biotype=pseudogene;locus_tag=AC57_RS28840;old_locus_tag=AC57_1386;partial=true;pseudo=true;start_range=.,19468 NZ_JJLR01000053.1 Protein Homology CDS 19468 20643 . + 0 ID=cds-AC57_RS28840;Parent=gene-AC57_RS28840;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=ycjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415832.1;locus_tag=AC57_RS28840;partial=true;product=kojibiose phosphorylase;pseudo=true;start_range=.,19468;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 20640 21299 . + . ID=gene-AC57_RS16790;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=AC57_RS16790;old_locus_tag=AC57_1387 NZ_JJLR01000053.1 Protein Homology CDS 20640 21299 . + 0 ID=cds-WP_000775794.1;Parent=gene-AC57_RS16790;Dbxref=GenBank:WP_000775794.1;Name=WP_000775794.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415833.1;locus_tag=AC57_RS16790;product=beta-phosphoglucomutase;protein_id=WP_000775794.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 21313 22395 . + . ID=gene-AC57_RS16785;Name=AC57_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16785;old_locus_tag=AC57_1388 NZ_JJLR01000053.1 Protein Homology CDS 21313 22395 . + 0 ID=cds-WP_000057985.1;Parent=gene-AC57_RS16785;Dbxref=GenBank:WP_000057985.1;Name=WP_000057985.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309924.1;locus_tag=AC57_RS16785;product=ABC transporter ATP-binding protein;protein_id=WP_000057985.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 22440 23345 . + . ID=gene-AC57_RS16780;Name=ompG;gbkey=Gene;gene=ompG;gene_biotype=protein_coding;locus_tag=AC57_RS16780;old_locus_tag=AC57_1389 NZ_JJLR01000053.1 Protein Homology CDS 22440 23345 . + 0 ID=cds-WP_032279751.1;Parent=gene-AC57_RS16780;Dbxref=GenBank:WP_032279751.1;Name=WP_032279751.1;gbkey=CDS;gene=ompG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415835.1;locus_tag=AC57_RS16780;product=monomeric porin OmpG;protein_id=WP_032279751.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 23456 24454 . - . ID=gene-AC57_RS16775;Name=ycjW;gbkey=Gene;gene=ycjW;gene_biotype=protein_coding;locus_tag=AC57_RS16775;old_locus_tag=AC57_1390 NZ_JJLR01000053.1 Protein Homology CDS 23456 24454 . - 0 ID=cds-WP_032237217.1;Parent=gene-AC57_RS16775;Dbxref=GenBank:WP_032237217.1;Name=WP_032237217.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ycjW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415836.1;locus_tag=AC57_RS16775;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032237217.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 24610 26007 . + . ID=gene-AC57_RS16770;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AC57_RS16770;old_locus_tag=AC57_1391 NZ_JJLR01000053.1 Protein Homology CDS 24610 26007 . + 0 ID=cds-WP_000825775.1;Parent=gene-AC57_RS16770;Dbxref=GenBank:WP_000825775.1;Name=WP_000825775.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AC57_RS16770;product=YcjX family protein;protein_id=WP_000825775.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 26004 27065 . + . ID=gene-AC57_RS16765;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AC57_RS16765;old_locus_tag=AC57_1392 NZ_JJLR01000053.1 Protein Homology CDS 26004 27065 . + 0 ID=cds-WP_000138728.1;Parent=gene-AC57_RS16765;Dbxref=GenBank:WP_000138728.1;Name=WP_000138728.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AC57_RS16765;product=YcjF family protein;protein_id=WP_000138728.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 27213 28754 . + . ID=gene-AC57_RS16760;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AC57_RS16760;old_locus_tag=AC57_1393 NZ_JJLR01000053.1 Protein Homology CDS 27213 28754 . + 0 ID=cds-WP_032237215.1;Parent=gene-AC57_RS16760;Dbxref=GenBank:WP_032237215.1;Name=WP_032237215.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415839.1;locus_tag=AC57_RS16760;product=transcriptional regulator TyrR;protein_id=WP_032237215.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 28798 29304 . - . ID=gene-AC57_RS16755;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AC57_RS16755;old_locus_tag=AC57_1394 NZ_JJLR01000053.1 Protein Homology CDS 28798 29304 . - 0 ID=cds-WP_000084387.1;Parent=gene-AC57_RS16755;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AC57_RS16755;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 29423 30394 . + . ID=gene-AC57_RS16750;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AC57_RS16750;old_locus_tag=AC57_1395 NZ_JJLR01000053.1 Protein Homology CDS 29423 30394 . + 0 ID=cds-WP_004998404.1;Parent=gene-AC57_RS16750;Dbxref=GenBank:WP_004998404.1;Name=WP_004998404.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415841.4;locus_tag=AC57_RS16750;product=L-Ala-D/L-Glu epimerase;protein_id=WP_004998404.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 30369 31097 . - . ID=gene-AC57_RS16745;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AC57_RS16745;old_locus_tag=AC57_1396 NZ_JJLR01000053.1 Protein Homology CDS 30369 31097 . - 0 ID=cds-WP_000219122.1;Parent=gene-AC57_RS16745;Dbxref=GenBank:WP_000219122.1;Name=WP_000219122.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AC57_RS16745;product=murein tripeptide amidase MpaA;protein_id=WP_000219122.1;transl_table=11 NZ_JJLR01000053.1 RefSeq pseudogene 31224 31361 . - . ID=gene-AC57_RS16740;Name=AC57_RS16740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS16740;old_locus_tag=AC57_1397;partial=true;pseudo=true;start_range=.,31224 NZ_JJLR01000053.1 Protein Homology CDS 31224 31361 . - 0 ID=cds-AC57_RS16740;Parent=gene-AC57_RS16740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AC57_RS16740;partial=true;product=NAD-dependent dehydratase;pseudo=true;start_range=.,31224;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 31432 32352 . - . ID=gene-AC57_RS16735;Name=ycjY;gbkey=Gene;gene=ycjY;gene_biotype=protein_coding;locus_tag=AC57_RS16735;old_locus_tag=AC57_1398 NZ_JJLR01000053.1 Protein Homology CDS 31432 32352 . - 0 ID=cds-WP_001300523.1;Parent=gene-AC57_RS16735;Dbxref=GenBank:WP_001300523.1;Name=WP_001300523.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycjY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415843.2;locus_tag=AC57_RS16735;product=alpha/beta hydrolase;protein_id=WP_001300523.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 32490 33389 . + . ID=gene-AC57_RS16730;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AC57_RS16730;old_locus_tag=AC57_1399 NZ_JJLR01000053.1 Protein Homology CDS 32490 33389 . + 0 ID=cds-WP_000817708.1;Parent=gene-AC57_RS16730;Dbxref=GenBank:WP_000817708.1;Name=WP_000817708.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415844.1;locus_tag=AC57_RS16730;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_000817708.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 33726 35339 . + . ID=gene-AC57_RS16725;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AC57_RS16725;old_locus_tag=AC57_1400 NZ_JJLR01000053.1 Protein Homology CDS 33726 35339 . + 0 ID=cds-WP_000683020.1;Parent=gene-AC57_RS16725;Dbxref=GenBank:WP_000683020.1;Name=WP_000683020.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AC57_RS16725;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683020.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 35390 36421 . - . ID=gene-AC57_RS16720;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AC57_RS16720;old_locus_tag=AC57_1401 NZ_JJLR01000053.1 Protein Homology CDS 35390 36421 . - 0 ID=cds-WP_000559900.1;Parent=gene-AC57_RS16720;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AC57_RS16720;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 36665 36922 . + . ID=gene-AC57_RS16715;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AC57_RS16715;old_locus_tag=AC57_1402 NZ_JJLR01000053.1 Protein Homology CDS 36665 36922 . + 0 ID=cds-WP_032237214.1;Parent=gene-AC57_RS16715;Dbxref=GenBank:WP_032237214.1;Name=WP_032237214.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AC57_RS16715;product=DUF2534 family protein;protein_id=WP_032237214.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 36972 37922 . - . ID=gene-AC57_RS16710;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AC57_RS16710;old_locus_tag=AC57_1403 NZ_JJLR01000053.1 Protein Homology CDS 36972 37922 . - 0 ID=cds-WP_001262123.1;Parent=gene-AC57_RS16710;Dbxref=GenBank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AC57_RS16710;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 38074 38826 . - . ID=gene-AC57_RS16705;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AC57_RS16705;old_locus_tag=AC57_1404 NZ_JJLR01000053.1 Protein Homology CDS 38074 38826 . - 0 ID=cds-WP_000611911.1;Parent=gene-AC57_RS16705;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AC57_RS16705;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 39021 39536 . - . ID=gene-AC57_RS16700;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AC57_RS16700;old_locus_tag=AC57_1405 NZ_JJLR01000053.1 Protein Homology CDS 39021 39536 . - 0 ID=cds-WP_000945021.1;Parent=gene-AC57_RS16700;Dbxref=GenBank:WP_000945021.1;Name=WP_000945021.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AC57_RS16700;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945021.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 39547 41073 . - . ID=gene-AC57_RS16695;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=AC57_RS16695;old_locus_tag=AC57_1406 NZ_JJLR01000053.1 Protein Homology CDS 39547 41073 . - 0 ID=cds-WP_000062967.1;Parent=gene-AC57_RS16695;Dbxref=GenBank:WP_000062967.1;Name=WP_000062967.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AC57_RS16695;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_000062967.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 41107 42552 . - . ID=gene-AC57_RS16690;Name=abgB;gbkey=Gene;gene=abgB;gene_biotype=protein_coding;locus_tag=AC57_RS16690;old_locus_tag=AC57_1407 NZ_JJLR01000053.1 Protein Homology CDS 41107 42552 . - 0 ID=cds-WP_032279753.1;Parent=gene-AC57_RS16690;Dbxref=GenBank:WP_032279753.1;Name=WP_032279753.1;gbkey=CDS;gene=abgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415853.1;locus_tag=AC57_RS16690;product=p-aminobenzoyl-glutamate hydrolase subunit AbgB;protein_id=WP_032279753.1;transl_table=11 NZ_JJLR01000053.1 RefSeq pseudogene 42552 43863 . - . ID=gene-AC57_RS16685;Name=abgA;gbkey=Gene;gene=abgA;gene_biotype=pseudogene;locus_tag=AC57_RS16685;old_locus_tag=AC57_1408;pseudo=true NZ_JJLR01000053.1 Protein Homology CDS 42552 43863 . - 0 ID=cds-AC57_RS16685;Parent=gene-AC57_RS16685;Note=frameshifted;gbkey=CDS;gene=abgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415854.4;locus_tag=AC57_RS16685;product=p-aminobenzoyl-glutamate hydrolase subunit AbgA;pseudo=true;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 44039 44947 . + . ID=gene-AC57_RS16680;Name=abgR;gbkey=Gene;gene=abgR;gene_biotype=protein_coding;locus_tag=AC57_RS16680;old_locus_tag=AC57_1409 NZ_JJLR01000053.1 Protein Homology CDS 44039 44947 . + 0 ID=cds-WP_000885446.1;Parent=gene-AC57_RS16680;Dbxref=GenBank:WP_000885446.1;Name=WP_000885446.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=abgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309950.1;locus_tag=AC57_RS16680;product=LysR family transcriptional regulator;protein_id=WP_000885446.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 45277 45840 . + . ID=gene-AC57_RS16675;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=AC57_RS16675;old_locus_tag=AC57_1410 NZ_JJLR01000053.1 Protein Homology CDS 45277 45840 . + 0 ID=cds-WP_001046829.1;Parent=gene-AC57_RS16675;Dbxref=GenBank:WP_001046829.1;Name=WP_001046829.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415856.1;locus_tag=AC57_RS16675;product=DNA endonuclease SmrA;protein_id=WP_001046829.1;transl_table=11 NZ_JJLR01000053.1 RefSeq gene 45861 47093 . - . ID=gene-AC57_RS16670;Name=dgcM;gbkey=Gene;gene=dgcM;gene_biotype=protein_coding;locus_tag=AC57_RS16670;old_locus_tag=AC57_1411 NZ_JJLR01000053.1 Protein Homology CDS 45861 47093 . - 0 ID=cds-WP_000628058.1;Parent=gene-AC57_RS16670;Dbxref=GenBank:WP_000628058.1;Name=WP_000628058.1;gbkey=CDS;gene=dgcM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415857.2;locus_tag=AC57_RS16670;product=diguanylate cyclase DgcM;protein_id=WP_000628058.1;transl_table=11 NZ_JJLR01000053.1 RefSeq pseudogene 47160 47478 . - . ID=gene-AC57_RS16665;Name=AC57_RS16665;end_range=47478,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS16665;old_locus_tag=AC57_1412;partial=true;pseudo=true NZ_JJLR01000053.1 Protein Homology CDS 47160 47478 . - 1 ID=cds-AC57_RS16665;Parent=gene-AC57_RS16665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=47478,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS16665;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000054.1 1 15742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000054.1 RefSeq region 1 15742 . + . ID=NZ_JJLR01000054.1:1..15742;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000054.1 RefSeq gene 1 229 . - . ID=gene-AC57_RS0123740;Name=AC57_RS0123740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123740;old_locus_tag=AC57_1413;partial=true;start_range=.,1 NZ_JJLR01000054.1 Protein Homology CDS 1 229 . - 0 ID=cds-WP_001396637.1;Parent=gene-AC57_RS0123740;Dbxref=GenBank:WP_001396637.1;Name=WP_001396637.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123740;partial=true;product=IS1 family transposase;protein_id=WP_001396637.1;start_range=.,1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 435 482 . + . ID=gene-AC57_RS30500;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AC57_RS30500 NZ_JJLR01000054.1 Protein Homology CDS 435 482 . + 0 ID=cds-WP_211180494.1;Parent=gene-AC57_RS30500;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AC57_RS30500;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 496 1479 . + . ID=gene-AC57_RS16660;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AC57_RS16660;old_locus_tag=AC57_1414 NZ_JJLR01000054.1 Protein Homology CDS 496 1479 . + 0 ID=cds-WP_000387388.1;Parent=gene-AC57_RS16660;Dbxref=GenBank:WP_000387388.1;Name=WP_000387388.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AC57_RS16660;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 1754 1927 . + . ID=gene-AC57_RS30985;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AC57_RS30985 NZ_JJLR01000054.1 Protein Homology CDS 1754 1927 . + 0 ID=cds-WP_001296046.1;Parent=gene-AC57_RS30985;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AC57_RS30985;product=proline-rich small protein YnaL;protein_id=WP_001296046.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 1957 3330 . + . ID=gene-AC57_RS16655;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AC57_RS16655;old_locus_tag=AC57_1415 NZ_JJLR01000054.1 Protein Homology CDS 1957 3330 . + 0 ID=cds-WP_032280019.1;Parent=gene-AC57_RS16655;Dbxref=GenBank:WP_032280019.1;Name=WP_032280019.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415859.1;locus_tag=AC57_RS16655;product=ATP-dependent RNA helicase DbpA;protein_id=WP_032280019.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 3459 4394 . - . ID=gene-AC57_RS16650;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AC57_RS16650;old_locus_tag=AC57_1416 NZ_JJLR01000054.1 Protein Homology CDS 3459 4394 . - 0 ID=cds-WP_032237675.1;Parent=gene-AC57_RS16650;Dbxref=GenBank:WP_032237675.1;Name=WP_032237675.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707683.1;locus_tag=AC57_RS16650;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_032237675.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 4570 5004 . - . ID=gene-AC57_RS16645;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AC57_RS16645;old_locus_tag=AC57_1417 NZ_JJLR01000054.1 Protein Homology CDS 4570 5004 . - 0 ID=cds-WP_001295593.1;Parent=gene-AC57_RS16645;Dbxref=GenBank:WP_001295593.1;Name=WP_001295593.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310024.2;locus_tag=AC57_RS16645;product=universal stress protein UspF;protein_id=WP_001295593.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 5145 6278 . - . ID=gene-AC57_RS16640;Name=ompN;gbkey=Gene;gene=ompN;gene_biotype=protein_coding;locus_tag=AC57_RS16640;old_locus_tag=AC57_1418 NZ_JJLR01000054.1 Protein Homology CDS 5145 6278 . - 0 ID=cds-WP_032285669.1;Parent=gene-AC57_RS16640;Dbxref=GenBank:WP_032285669.1;Name=WP_032285669.1;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AC57_RS16640;product=porin OmpN;protein_id=WP_032285669.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 6645 10169 . - . ID=gene-AC57_RS16635;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AC57_RS16635;old_locus_tag=AC57_1419 NZ_JJLR01000054.1 Protein Homology CDS 6645 10169 . - 0 ID=cds-WP_032237676.1;Parent=gene-AC57_RS16635;Dbxref=GenBank:WP_032237676.1;Name=WP_032237676.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415896.1;locus_tag=AC57_RS16635;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_032237676.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 10443 10709 . + . ID=gene-AC57_RS16630;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=AC57_RS16630;old_locus_tag=AC57_1420 NZ_JJLR01000054.1 Protein Homology CDS 10443 10709 . + 0 ID=cds-WP_001295715.1;Parent=gene-AC57_RS16630;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AC57_RS16630;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 10706 11128 . - . ID=gene-AC57_RS16625;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AC57_RS16625;old_locus_tag=AC57_1421 NZ_JJLR01000054.1 Protein Homology CDS 10706 11128 . - 0 ID=cds-WP_001296048.1;Parent=gene-AC57_RS16625;Dbxref=GenBank:WP_001296048.1;Name=WP_001296048.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AC57_RS16625;product=heat shock protein HslJ;protein_id=WP_001296048.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 11239 12228 . - . ID=gene-AC57_RS16620;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AC57_RS16620;old_locus_tag=AC57_1422 NZ_JJLR01000054.1 Protein Homology CDS 11239 12228 . - 0 ID=cds-WP_000762229.1;Parent=gene-AC57_RS16620;Dbxref=GenBank:WP_000762229.1;Name=WP_000762229.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310029.1;locus_tag=AC57_RS16620;product=D-lactate dehydrogenase;protein_id=WP_000762229.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 12436 15075 . + . ID=gene-AC57_RS16615;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=AC57_RS16615;old_locus_tag=AC57_1423 NZ_JJLR01000054.1 Protein Homology CDS 12436 15075 . + 0 ID=cds-WP_032280018.1;Parent=gene-AC57_RS16615;Dbxref=GenBank:WP_032280018.1;Name=WP_032280018.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415899.1;locus_tag=AC57_RS16615;product=YdbH family protein;protein_id=WP_032280018.1;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 15072 15257 . + . ID=gene-AC57_RS16610;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=AC57_RS16610;old_locus_tag=AC57_1424 NZ_JJLR01000054.1 Protein Homology CDS 15072 15257 . + 0 ID=cds-WP_000698145.1;Parent=gene-AC57_RS16610;Dbxref=GenBank:WP_000698145.1;Name=WP_000698145.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415900.1;locus_tag=AC57_RS16610;product=YnbE family lipoprotein;protein_id=WP_000698145.1;transl_table=11 NZ_JJLR01000054.1 RefSeq pseudogene 15265 15453 . + . ID=gene-AC57_RS16605;Name=AC57_RS16605;end_range=15453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS16605;old_locus_tag=AC57_1425;partial=true;pseudo=true NZ_JJLR01000054.1 Protein Homology CDS 15265 15453 . + 0 ID=cds-AC57_RS16605;Parent=gene-AC57_RS16605;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=15453,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415901.2;locus_tag=AC57_RS16605;partial=true;product=DUF1318 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000054.1 RefSeq gene 15509 15742 . + . ID=gene-AC57_RS0123750;Name=AC57_RS0123750;end_range=15742,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123750;old_locus_tag=AC57_1426;partial=true NZ_JJLR01000054.1 Protein Homology CDS 15509 15742 . + 0 ID=cds-WP_001408888.1;Parent=gene-AC57_RS0123750;Dbxref=GenBank:WP_001408888.1;Name=WP_001408888.1;end_range=15742,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123750;partial=true;product=IS1-like element transposase;protein_id=WP_001408888.1;transl_table=11 ##sequence-region NZ_JJLR01000055.1 1 4528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000055.1 RefSeq region 1 4528 . + . ID=NZ_JJLR01000055.1:1..4528;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000055.1 RefSeq gene 1 249 . + . ID=gene-AC57_RS16600;Name=AC57_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16600;old_locus_tag=AC57_1427;partial=true;start_range=.,1 NZ_JJLR01000055.1 Protein Homology CDS 1 249 . + 0 ID=cds-WP_000674744.1-6;Parent=gene-AC57_RS16600;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS16600;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;start_range=.,1;transl_table=11 NZ_JJLR01000055.1 RefSeq pseudogene 260 1405 . + . ID=gene-AC57_RS16595;Name=AC57_RS16595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS16595;old_locus_tag=AC57_1428;partial=true;pseudo=true;start_range=.,260 NZ_JJLR01000055.1 Protein Homology CDS 260 1405 . + 0 ID=cds-AC57_RS16595;Parent=gene-AC57_RS16595;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415925.2;locus_tag=AC57_RS16595;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,260;transl_table=11 NZ_JJLR01000055.1 RefSeq pseudogene 1576 1776 . + . ID=gene-AC57_RS30225;Name=AC57_RS30225;end_range=1776,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30225;partial=true;pseudo=true NZ_JJLR01000055.1 Protein Homology CDS 1576 1776 . + 0 ID=cds-AC57_RS30225;Parent=gene-AC57_RS30225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1776,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310037.2;locus_tag=AC57_RS30225;partial=true;product=CDP-alcohol phosphatidyltransferase family protein;pseudo=true;transl_table=11 NZ_JJLR01000055.1 RefSeq pseudogene 1762 3225 . + . ID=gene-AC57_RS30645;Name=AC57_RS30645;end_range=3225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30645;partial=true;pseudo=true;start_range=.,1762 NZ_JJLR01000055.1 Protein Homology CDS 1762 3225 . + 0 ID=cds-AC57_RS30645;Parent=gene-AC57_RS30645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310039.1;locus_tag=AC57_RS30645;partial=true;product=class I SAM-dependent methyltransferase family protein;pseudo=true;start_range=.,1762;transl_table=11 NZ_JJLR01000055.1 RefSeq pseudogene 3223 4182 . + . ID=gene-AC57_RS30650;Name=AC57_RS30650;end_range=4182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30650;partial=true;pseudo=true NZ_JJLR01000055.1 Protein Homology CDS 3223 4182 . + 0 ID=cds-AC57_RS30650;Parent=gene-AC57_RS30650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008610;end_range=4182,.;gbkey=CDS;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310040.2;locus_tag=AC57_RS30650;partial=true;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 NZ_JJLR01000055.1 RefSeq pseudogene 4197 4528 . - . ID=gene-AC57_RS16590;Name=AC57_RS16590;end_range=4528,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS16590;old_locus_tag=AC57_1430;partial=true;pseudo=true NZ_JJLR01000055.1 Protein Homology CDS 4197 4528 . - 2 ID=cds-AC57_RS16590;Parent=gene-AC57_RS16590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=4528,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS16590;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000056.1 1 22547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000056.1 RefSeq region 1 22547 . + . ID=NZ_JJLR01000056.1:1..22547;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000056.1 RefSeq gene 1 237 . - . ID=gene-AC57_RS0123765;Name=AC57_RS0123765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123765;old_locus_tag=AC57_1431;partial=true;start_range=.,1 NZ_JJLR01000056.1 Protein Homology CDS 1 237 . - 0 ID=cds-WP_000179207.1-4;Parent=gene-AC57_RS0123765;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123765;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;start_range=.,1;transl_table=11 NZ_JJLR01000056.1 RefSeq pseudogene 293 658 . + . ID=gene-AC57_RS16585;Name=AC57_RS16585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS16585;old_locus_tag=AC57_1432;partial=true;pseudo=true;start_range=.,293 NZ_JJLR01000056.1 Protein Homology CDS 293 658 . + 0 ID=cds-AC57_RS16585;Parent=gene-AC57_RS16585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004721,GO:0008138;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA,protein tyrosine/serine/threonine phosphatase activity|0008138||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415929.1;locus_tag=AC57_RS16585;partial=true;product=dual specificity protein phosphatase family protein;pseudo=true;start_range=.,293;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 712 1317 . - . ID=gene-AC57_RS16580;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AC57_RS16580;old_locus_tag=AC57_1433 NZ_JJLR01000056.1 Protein Homology CDS 712 1317 . - 0 ID=cds-WP_000048950.1;Parent=gene-AC57_RS16580;Dbxref=GenBank:WP_000048950.1;Name=WP_000048950.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415930.1;locus_tag=AC57_RS16580;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048950.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 1518 5420 . + . ID=gene-AC57_RS16575;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AC57_RS16575;old_locus_tag=AC57_1434 NZ_JJLR01000056.1 Protein Homology CDS 1518 5420 . + 0 ID=cds-WP_032237541.1;Parent=gene-AC57_RS16575;Dbxref=GenBank:WP_032237541.1;Name=WP_032237541.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AC57_RS16575;product=ATP-dependent RNA helicase HrpA;protein_id=WP_032237541.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 5692 6492 . + . ID=gene-AC57_RS16570;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AC57_RS16570;old_locus_tag=AC57_1435 NZ_JJLR01000056.1 Protein Homology CDS 5692 6492 . + 0 ID=cds-WP_032237542.1;Parent=gene-AC57_RS16570;Dbxref=GenBank:WP_032237542.1;Name=WP_032237542.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415932.1;locus_tag=AC57_RS16570;product=DUF218 domain-containing protein YdcF;protein_id=WP_032237542.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 6689 8128 . + . ID=gene-AC57_RS16565;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AC57_RS16565;old_locus_tag=AC57_1436 NZ_JJLR01000056.1 Protein Homology CDS 6689 8128 . + 0 ID=cds-WP_032279948.1;Parent=gene-AC57_RS16565;Dbxref=GenBank:WP_032279948.1;Name=WP_032279948.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415933.1;locus_tag=AC57_RS16565;product=aldehyde dehydrogenase;protein_id=WP_032279948.1;transl_table=11 NZ_JJLR01000056.1 RefSeq pseudogene 8170 9170 . - . ID=gene-AC57_RS29735;Name=gap;gbkey=Gene;gene=gap;gene_biotype=pseudogene;locus_tag=AC57_RS29735;pseudo=true NZ_JJLR01000056.1 Protein Homology CDS 8170 9170 . - 0 ID=cds-AC57_RS29735;Parent=gene-AC57_RS29735;Note=frameshifted%3B internal stop;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AC57_RS29735;product=type I glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 9359 9889 . + . ID=gene-AC57_RS16545;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AC57_RS16545;old_locus_tag=AC57_1440 NZ_JJLR01000056.1 Protein Homology CDS 9359 9889 . + 0 ID=cds-WP_000428998.1;Parent=gene-AC57_RS16545;Dbxref=GenBank:WP_000428998.1;Name=WP_000428998.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AC57_RS16545;product=cytochrome b561;protein_id=WP_000428998.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 10134 10307 . + . ID=gene-AC57_RS16540;Name=AC57_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16540;old_locus_tag=AC57_1441 NZ_JJLR01000056.1 Protein Homology CDS 10134 10307 . + 0 ID=cds-WP_000731833.1;Parent=gene-AC57_RS16540;Dbxref=GenBank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AC57_RS16540;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 10333 10401 . + . ID=gene-AC57_RS30505;Name=yncP;gbkey=Gene;gene=yncP;gene_biotype=protein_coding;locus_tag=AC57_RS30505 NZ_JJLR01000056.1 Protein Homology CDS 10333 10401 . + 0 ID=cds-WP_212976465.1;Parent=gene-AC57_RS30505;Dbxref=GenBank:WP_212976465.1;Name=WP_212976465.1;gbkey=CDS;gene=yncP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AC57_RS30505;product=hypothetical protein;protein_id=WP_212976465.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 10379 10528 . - . ID=gene-AC57_RS0123770;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AC57_RS0123770 NZ_JJLR01000056.1 Protein Homology CDS 10379 10528 . - 0 ID=cds-WP_001320773.1;Parent=gene-AC57_RS0123770;Dbxref=GenBank:WP_001320773.1;Name=WP_001320773.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AC57_RS0123770;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001320773.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 10927 12567 . + . ID=gene-AC57_RS16535;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AC57_RS16535;old_locus_tag=AC57_1442 NZ_JJLR01000056.1 Protein Homology CDS 10927 12567 . + 0 ID=cds-WP_001098557.1;Parent=gene-AC57_RS16535;Dbxref=GenBank:WP_001098557.1;Name=WP_001098557.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AC57_RS16535;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_001098557.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 12605 13528 . - . ID=gene-AC57_RS16530;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AC57_RS16530;old_locus_tag=AC57_1443 NZ_JJLR01000056.1 Protein Homology CDS 12605 13528 . - 0 ID=cds-WP_000414567.1;Parent=gene-AC57_RS16530;Dbxref=GenBank:WP_000414567.1;Name=WP_000414567.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415939.2;locus_tag=AC57_RS16530;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414567.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 13745 15088 . + . ID=gene-AC57_RS16525;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AC57_RS16525;old_locus_tag=AC57_1444 NZ_JJLR01000056.1 Protein Homology CDS 13745 15088 . + 0 ID=cds-WP_000013789.1;Parent=gene-AC57_RS16525;Dbxref=GenBank:WP_000013789.1;Name=WP_000013789.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415940.1;locus_tag=AC57_RS16525;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_000013789.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 15313 16968 . + . ID=gene-AC57_RS16520;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AC57_RS16520;old_locus_tag=AC57_1445 NZ_JJLR01000056.1 Protein Homology CDS 15313 16968 . + 0 ID=cds-WP_000375956.1;Parent=gene-AC57_RS16520;Dbxref=GenBank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=AC57_RS16520;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 17108 17332 . + . ID=gene-AC57_RS16515;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AC57_RS16515;old_locus_tag=AC57_1446 NZ_JJLR01000056.1 Protein Homology CDS 17108 17332 . + 0 ID=cds-WP_001296778.1;Parent=gene-AC57_RS16515;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AC57_RS16515;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 17395 17934 . + . ID=gene-AC57_RS16510;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AC57_RS16510;old_locus_tag=AC57_1447 NZ_JJLR01000056.1 Protein Homology CDS 17395 17934 . + 0 ID=cds-WP_000140873.1;Parent=gene-AC57_RS16510;Dbxref=GenBank:WP_000140873.1;Name=WP_000140873.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415944.1;locus_tag=AC57_RS16510;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000140873.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 17926 18906 . - . ID=gene-AC57_RS16505;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=AC57_RS16505;old_locus_tag=AC57_1448 NZ_JJLR01000056.1 Protein Homology CDS 17926 18906 . - 0 ID=cds-WP_001234040.1;Parent=gene-AC57_RS16505;Dbxref=GenBank:WP_001234040.1;Name=WP_001234040.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415945.1;locus_tag=AC57_RS16505;product=YdcK family protein;protein_id=WP_001234040.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 19030 20022 . + . ID=gene-AC57_RS16500;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AC57_RS16500;old_locus_tag=AC57_1449 NZ_JJLR01000056.1 Protein Homology CDS 19030 20022 . + 0 ID=cds-WP_032237544.1;Parent=gene-AC57_RS16500;Dbxref=GenBank:WP_032237544.1;Name=WP_032237544.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=AC57_RS16500;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_032237544.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 20019 20612 . + . ID=gene-AC57_RS16495;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AC57_RS16495;old_locus_tag=AC57_1450 NZ_JJLR01000056.1 Protein Homology CDS 20019 20612 . + 0 ID=cds-WP_000586732.1;Parent=gene-AC57_RS16495;Dbxref=GenBank:WP_000586732.1;Name=WP_000586732.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AC57_RS16495;product=tellurite resistance methyltransferase TehB;protein_id=WP_000586732.1;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 20914 21582 . + . ID=gene-AC57_RS16490;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AC57_RS16490;old_locus_tag=AC57_1452 NZ_JJLR01000056.1 Protein Homology CDS 20914 21582 . + 0 ID=cds-WP_001261013.1;Parent=gene-AC57_RS16490;Dbxref=GenBank:WP_001261013.1;Name=WP_001261013.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AC57_RS16490;product=DUF3313 domain-containing protein;protein_id=WP_001261013.1;transl_table=11 NZ_JJLR01000056.1 RefSeq pseudogene 21681 22106 . - . ID=gene-AC57_RS26910;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC57_RS26910;partial=true;pseudo=true;start_range=.,21681 NZ_JJLR01000056.1 Protein Homology CDS 21681 22106 . - 0 ID=cds-AC57_RS26910;Parent=gene-AC57_RS26910;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=AC57_RS26910;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,21681;transl_table=11 NZ_JJLR01000056.1 RefSeq gene 22114 22547 . + . ID=gene-AC57_RS16480;Name=AC57_RS16480;end_range=22547,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16480;old_locus_tag=AC57_1455;partial=true NZ_JJLR01000056.1 Protein Homology CDS 22114 22547 . + 0 ID=cds-WP_032285671.1;Parent=gene-AC57_RS16480;Dbxref=GenBank:WP_032285671.1;Name=WP_032285671.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;end_range=22547,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AC57_RS16480;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_032285671.1;transl_table=11 ##sequence-region NZ_JJLR01000057.1 1 23703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000057.1 RefSeq region 1 23703 . + . ID=NZ_JJLR01000057.1:1..23703;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000057.1 RefSeq gene 1 310 . + . ID=gene-AC57_RS16475;Name=AC57_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16475;old_locus_tag=AC57_1456;partial=true;start_range=.,1 NZ_JJLR01000057.1 Protein Homology CDS 1 310 . + 1 ID=cds-WP_001329103.1;Parent=gene-AC57_RS16475;Dbxref=GenBank:WP_001329103.1;Name=WP_001329103.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AC57_RS16475;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_001329103.1;start_range=.,1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 350 1564 . - . ID=gene-AC57_RS16470;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AC57_RS16470;old_locus_tag=AC57_1457 NZ_JJLR01000057.1 Protein Homology CDS 350 1564 . - 0 ID=cds-WP_071703446.1;Parent=gene-AC57_RS16470;Dbxref=GenBank:WP_071703446.1;Name=WP_071703446.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748359.1;locus_tag=AC57_RS16470;product=BenE family transporter YdcO;protein_id=WP_071703446.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 1617 2153 . + . ID=gene-AC57_RS16465;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AC57_RS16465;old_locus_tag=AC57_1458 NZ_JJLR01000057.1 Protein Homology CDS 1617 2153 . + 0 ID=cds-WP_000429155.1;Parent=gene-AC57_RS16465;Dbxref=GenBank:WP_000429155.1;Name=WP_000429155.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AC57_RS16465;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429155.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 2226 4187 . + . ID=gene-AC57_RS16460;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AC57_RS16460;old_locus_tag=AC57_1459 NZ_JJLR01000057.1 Protein Homology CDS 2226 4187 . + 0 ID=cds-WP_001463389.1;Parent=gene-AC57_RS16460;Dbxref=GenBank:WP_001463389.1;Name=WP_001463389.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AC57_RS16460;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_001463389.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 4279 4509 . - . ID=gene-AC57_RS16455;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AC57_RS16455;old_locus_tag=AC57_1460 NZ_JJLR01000057.1 Protein Homology CDS 4279 4509 . - 0 ID=cds-WP_000494244.1;Parent=gene-AC57_RS16455;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AC57_RS16455;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 4731 4907 . + . ID=gene-AC57_RS0123785;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;locus_tag=AC57_RS0123785 NZ_JJLR01000057.1 Protein Homology CDS 4731 4907 . + 0 ID=cds-WP_000813794.1;Parent=gene-AC57_RS0123785;Dbxref=GenBank:WP_000813794.1;Name=WP_000813794.1;gbkey=CDS;gene=hicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AC57_RS0123785;product=type II toxin-antitoxin system mRNA interferase toxin HicA;protein_id=WP_000813794.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 4953 5369 . + . ID=gene-AC57_RS16450;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AC57_RS16450;old_locus_tag=AC57_1462 NZ_JJLR01000057.1 Protein Homology CDS 4953 5369 . + 0 ID=cds-WP_001270286.1;Parent=gene-AC57_RS16450;Dbxref=GenBank:WP_001270286.1;Name=WP_001270286.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AC57_RS16450;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_001270286.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 5448 6857 . + . ID=gene-AC57_RS16445;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AC57_RS16445;old_locus_tag=AC57_1463 NZ_JJLR01000057.1 Protein Homology CDS 5448 6857 . + 0 ID=cds-WP_032279864.1;Parent=gene-AC57_RS16445;Dbxref=GenBank:WP_032279864.1;Name=WP_032279864.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000760649.1;locus_tag=AC57_RS16445;product=PLP-dependent aminotransferase family protein;protein_id=WP_032279864.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 7099 8244 . + . ID=gene-AC57_RS16440;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AC57_RS16440;old_locus_tag=AC57_1464 NZ_JJLR01000057.1 Protein Homology CDS 7099 8244 . + 0 ID=cds-WP_000047429.1;Parent=gene-AC57_RS16440;Dbxref=GenBank:WP_000047429.1;Name=WP_000047429.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AC57_RS16440;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_000047429.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 8262 9275 . + . ID=gene-AC57_RS16435;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AC57_RS16435;old_locus_tag=AC57_1465 NZ_JJLR01000057.1 Protein Homology CDS 8262 9275 . + 0 ID=cds-WP_032237545.1;Parent=gene-AC57_RS16435;Dbxref=GenBank:WP_032237545.1;Name=WP_032237545.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415958.1;locus_tag=AC57_RS16435;product=ABC transporter ATP-binding protein;protein_id=WP_032237545.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 9276 10217 . + . ID=gene-AC57_RS16430;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=AC57_RS16430;old_locus_tag=AC57_1466 NZ_JJLR01000057.1 Protein Homology CDS 9276 10217 . + 0 ID=cds-WP_032219734.1;Parent=gene-AC57_RS16430;Dbxref=GenBank:WP_032219734.1;Name=WP_032219734.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310073.1;locus_tag=AC57_RS16430;product=ABC transporter permease;protein_id=WP_032219734.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 10207 10968 . + . ID=gene-AC57_RS16425;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AC57_RS16425;old_locus_tag=AC57_1467 NZ_JJLR01000057.1 Protein Homology CDS 10207 10968 . + 0 ID=cds-WP_032279865.1;Parent=gene-AC57_RS16425;Dbxref=GenBank:WP_032279865.1;Name=WP_032279865.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310074.1;locus_tag=AC57_RS16425;product=ABC transporter permease;protein_id=WP_032279865.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 11023 12447 . + . ID=gene-AC57_RS16420;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AC57_RS16420;old_locus_tag=AC57_1468 NZ_JJLR01000057.1 Protein Homology CDS 11023 12447 . + 0 ID=cds-WP_001163875.1;Parent=gene-AC57_RS16420;Dbxref=GenBank:WP_001163875.1;Name=WP_001163875.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415961.1;locus_tag=AC57_RS16420;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163875.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 12544 12639 . - . ID=gene-AC57_RS26915;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AC57_RS26915 NZ_JJLR01000057.1 Protein Homology CDS 12544 12639 . - 0 ID=cds-WP_001310798.1;Parent=gene-AC57_RS26915;Dbxref=GenBank:WP_001310798.1;Name=WP_001310798.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AC57_RS26915;product=stress response membrane protein YncL;protein_id=WP_001310798.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 12834 13007 . + . ID=gene-AC57_RS0123795;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AC57_RS0123795;old_locus_tag=AC57_1470 NZ_JJLR01000057.1 Protein Homology CDS 12834 13007 . + 0 ID=cds-WP_000061178.1;Parent=gene-AC57_RS0123795;Dbxref=GenBank:WP_000061178.1;Name=WP_000061178.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AC57_RS0123795;product=orphan toxin OrtT;protein_id=WP_000061178.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 13093 13326 . + . ID=gene-AC57_RS16415;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AC57_RS16415;old_locus_tag=AC57_1471 NZ_JJLR01000057.1 Protein Homology CDS 13093 13326 . + 0 ID=cds-WP_000018633.1;Parent=gene-AC57_RS16415;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AC57_RS16415;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 13327 13776 . - . ID=gene-AC57_RS16410;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AC57_RS16410;old_locus_tag=AC57_1472 NZ_JJLR01000057.1 Protein Homology CDS 13327 13776 . - 0 ID=cds-WP_001076535.1;Parent=gene-AC57_RS16410;Dbxref=GenBank:WP_001076535.1;Name=WP_001076535.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415964.1;locus_tag=AC57_RS16410;product=DMT family transporter;protein_id=WP_001076535.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 13773 14291 . - . ID=gene-AC57_RS16405;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AC57_RS16405;old_locus_tag=AC57_1473 NZ_JJLR01000057.1 Protein Homology CDS 13773 14291 . - 0 ID=cds-WP_000027563.1;Parent=gene-AC57_RS16405;Dbxref=GenBank:WP_000027563.1;Name=WP_000027563.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310079.1;locus_tag=AC57_RS16405;product=GNAT family N-acetyltransferase;protein_id=WP_000027563.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 14472 15509 . + . ID=gene-AC57_RS16400;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AC57_RS16400;old_locus_tag=AC57_1474 NZ_JJLR01000057.1 Protein Homology CDS 14472 15509 . + 0 ID=cds-WP_000531452.1;Parent=gene-AC57_RS16400;Dbxref=GenBank:WP_000531452.1;Name=WP_000531452.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AC57_RS16400;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_000531452.1;transl_table=11 NZ_JJLR01000057.1 RefSeq pseudogene 15707 16371 . + . ID=gene-AC57_RS0123800;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=pseudogene;locus_tag=AC57_RS0123800;pseudo=true NZ_JJLR01000057.1 Protein Homology CDS 15707 16371 . + 0 ID=cds-AC57_RS0123800;Parent=gene-AC57_RS0123800;Note=frameshifted;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415967.2;locus_tag=AC57_RS0123800;product=colanic acid/biofilm transcriptional regulator McbR;pseudo=true;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 16407 18509 . - . ID=gene-AC57_RS16395;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AC57_RS16395;old_locus_tag=AC57_1477 NZ_JJLR01000057.1 Protein Homology CDS 16407 18509 . - 0 ID=cds-WP_001340251.1;Parent=gene-AC57_RS16395;Dbxref=GenBank:WP_001340251.1;Name=WP_001340251.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=AC57_RS16395;product=TonB-dependent receptor PqqU;protein_id=WP_001340251.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 18751 19812 . + . ID=gene-AC57_RS16390;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AC57_RS16390;old_locus_tag=AC57_1478 NZ_JJLR01000057.1 Protein Homology CDS 18751 19812 . + 0 ID=cds-WP_032279866.1;Parent=gene-AC57_RS16390;Dbxref=GenBank:WP_032279866.1;Name=WP_032279866.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=AC57_RS16390;product=YncE family protein;protein_id=WP_032279866.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 19927 21426 . - . ID=gene-AC57_RS16385;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AC57_RS16385;old_locus_tag=AC57_1479 NZ_JJLR01000057.1 Protein Homology CDS 19927 21426 . - 0 ID=cds-WP_032253531.1;Parent=gene-AC57_RS16385;Dbxref=GenBank:WP_032253531.1;Name=WP_032253531.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AC57_RS16385;product=L-asparagine permease;protein_id=WP_032253531.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 21693 22310 . + . ID=gene-AC57_RS16380;Name=yncG;gbkey=Gene;gene=yncG;gene_biotype=protein_coding;locus_tag=AC57_RS16380;old_locus_tag=AC57_1481 NZ_JJLR01000057.1 Protein Homology CDS 21693 22310 . + 0 ID=cds-WP_000598850.1;Parent=gene-AC57_RS16380;Dbxref=GenBank:WP_000598850.1;Name=WP_000598850.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yncG;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415971.1;locus_tag=AC57_RS16380;product=glutathione S-transferase family protein;protein_id=WP_000598850.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 22386 22598 . + . ID=gene-AC57_RS16375;Name=yncH;gbkey=Gene;gene=yncH;gene_biotype=protein_coding;locus_tag=AC57_RS16375;old_locus_tag=AC57_1482 NZ_JJLR01000057.1 Protein Homology CDS 22386 22598 . + 0 ID=cds-WP_000226995.1;Parent=gene-AC57_RS16375;Dbxref=GenBank:WP_000226995.1;Name=WP_000226995.1;gbkey=CDS;gene=yncH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415972.1;locus_tag=AC57_RS16375;product=YncH family protein;protein_id=WP_000226995.1;transl_table=11 NZ_JJLR01000057.1 RefSeq gene 23418 23703 . + . ID=gene-AC57_RS16370;Name=AC57_RS16370;end_range=23703,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16370;old_locus_tag=AC57_1484;partial=true NZ_JJLR01000057.1 Protein Homology CDS 23418 23703 . + 0 ID=cds-WP_000103171.1;Parent=gene-AC57_RS16370;Dbxref=GenBank:WP_000103171.1;Name=WP_000103171.1;end_range=23703,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308634.1;locus_tag=AC57_RS16370;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_000103171.1;transl_table=11 ##sequence-region NZ_JJLR01000058.1 1 8398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000058.1 RefSeq region 1 8398 . + . ID=NZ_JJLR01000058.1:1..8398;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000058.1 RefSeq gene 1 194 . + . ID=gene-AC57_RS16365;Name=AC57_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16365;old_locus_tag=AC57_1485;partial=true;start_range=.,1 NZ_JJLR01000058.1 Protein Homology CDS 1 194 . + 2 ID=cds-WP_000718190.1-2;Parent=gene-AC57_RS16365;Dbxref=GenBank:WP_000718190.1;Name=WP_000718190.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS16365;partial=true;product=IS1 family transposase;protein_id=WP_000718190.1;start_range=.,1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 255 656 . - . ID=gene-AC57_RS16360;Name=AC57_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16360;old_locus_tag=AC57_1486 NZ_JJLR01000058.1 Protein Homology CDS 255 656 . - 0 ID=cds-WP_001339605.1;Parent=gene-AC57_RS16360;Dbxref=GenBank:WP_001339605.1;Name=WP_001339605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394555.1;locus_tag=AC57_RS16360;product=hypothetical protein;protein_id=WP_001339605.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 668 820 . - . ID=gene-AC57_RS16355;Name=AC57_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16355;old_locus_tag=AC57_1487 NZ_JJLR01000058.1 Protein Homology CDS 668 820 . - 0 ID=cds-WP_072183904.1;Parent=gene-AC57_RS16355;Dbxref=GenBank:WP_072183904.1;Name=WP_072183904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379546.1;locus_tag=AC57_RS16355;product=DUF1391 family protein;protein_id=WP_072183904.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 1139 1615 . - . ID=gene-AC57_RS0123805;Name=racR;gbkey=Gene;gene=racR;gene_biotype=protein_coding;locus_tag=AC57_RS0123805 NZ_JJLR01000058.1 Protein Homology CDS 1139 1615 . - 0 ID=cds-WP_000948454.1;Parent=gene-AC57_RS0123805;Dbxref=GenBank:WP_000948454.1;Name=WP_000948454.1;Ontology_term=GO:2000143,GO:0001217;gbkey=CDS;gene=racR;go_function=DNA-binding transcription repressor activity|0001217||IEA;go_process=negative regulation of DNA-templated transcription initiation|2000143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309533.1;locus_tag=AC57_RS0123805;product=DNA-binding transcriptional repressor RacR;protein_id=WP_000948454.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 1740 2063 . + . ID=gene-AC57_RS0123810;Name=AC57_RS0123810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123810 NZ_JJLR01000058.1 Protein Homology CDS 1740 2063 . + 0 ID=cds-WP_000711018.1;Parent=gene-AC57_RS0123810;Dbxref=GenBank:WP_000711018.1;Name=WP_000711018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309534.1;locus_tag=AC57_RS0123810;product=helix-turn-helix domain-containing protein;protein_id=WP_000711018.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 2047 2472 . + . ID=gene-AC57_RS16350;Name=AC57_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16350;old_locus_tag=AC57_1488 NZ_JJLR01000058.1 Protein Homology CDS 2047 2472 . + 0 ID=cds-WP_000693906.1;Parent=gene-AC57_RS16350;Dbxref=GenBank:WP_000693906.1;Name=WP_000693906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310304.1;locus_tag=AC57_RS16350;product=toxin YdaT family protein;protein_id=WP_000693906.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 2495 3457 . + . ID=gene-AC57_RS16345;Name=AC57_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16345;old_locus_tag=AC57_1489 NZ_JJLR01000058.1 Protein Homology CDS 2495 3457 . + 0 ID=cds-WP_071999867.1;Parent=gene-AC57_RS16345;Dbxref=GenBank:WP_071999867.1;Name=WP_071999867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310303.2;locus_tag=AC57_RS16345;product=helix-turn-helix domain-containing protein;protein_id=WP_071999867.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 3464 4210 . + . ID=gene-AC57_RS16340;Name=AC57_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16340;old_locus_tag=AC57_1490 NZ_JJLR01000058.1 Protein Homology CDS 3464 4210 . + 0 ID=cds-WP_000788950.1;Parent=gene-AC57_RS16340;Dbxref=GenBank:WP_000788950.1;Name=WP_000788950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309101.1;locus_tag=AC57_RS16340;product=ATP-binding protein;protein_id=WP_000788950.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 4232 5002 . + . ID=gene-AC57_RS16335;Name=AC57_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16335;old_locus_tag=AC57_1491 NZ_JJLR01000058.1 Protein Homology CDS 4232 5002 . + 0 ID=cds-WP_000451007.1;Parent=gene-AC57_RS16335;Dbxref=GenBank:WP_000451007.1;Name=WP_000451007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309102.1;locus_tag=AC57_RS16335;product=DUF1627 domain-containing protein;protein_id=WP_000451007.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 5018 5440 . + . ID=gene-AC57_RS16330;Name=AC57_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16330;old_locus_tag=AC57_1492 NZ_JJLR01000058.1 Protein Homology CDS 5018 5440 . + 0 ID=cds-WP_032280071.1;Parent=gene-AC57_RS16330;Dbxref=GenBank:WP_032280071.1;Name=WP_032280071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151251.1;locus_tag=AC57_RS16330;product=DUF977 family protein;protein_id=WP_032280071.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 5608 6246 . + . ID=gene-AC57_RS16325;Name=AC57_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16325;old_locus_tag=AC57_1493 NZ_JJLR01000058.1 Protein Homology CDS 5608 6246 . + 0 ID=cds-WP_050440068.1;Parent=gene-AC57_RS16325;Dbxref=GenBank:WP_050440068.1;Name=WP_050440068.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782641.1;locus_tag=AC57_RS16325;product=NUDIX hydrolase;protein_id=WP_050440068.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 6276 6914 . + . ID=gene-AC57_RS16320;Name=AC57_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16320;old_locus_tag=AC57_1494 NZ_JJLR01000058.1 Protein Homology CDS 6276 6914 . + 0 ID=cds-WP_000576900.1;Parent=gene-AC57_RS16320;Dbxref=GenBank:WP_000576900.1;Name=WP_000576900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001532459.1;locus_tag=AC57_RS16320;product=HAD family hydrolase;protein_id=WP_000576900.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 7479 7634 . + . ID=gene-AC57_RS0123820;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AC57_RS0123820 NZ_JJLR01000058.1 Protein Homology CDS 7479 7634 . + 0 ID=cds-WP_199265906.1;Parent=gene-AC57_RS0123820;Dbxref=GenBank:WP_199265906.1;Name=WP_199265906.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AC57_RS0123820;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_199265906.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 7802 8080 . + . ID=gene-AC57_RS28875;Name=AC57_RS28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28875 NZ_JJLR01000058.1 Protein Homology CDS 7802 8080 . + 0 ID=cds-WP_053892436.1;Parent=gene-AC57_RS28875;Dbxref=GenBank:WP_053892436.1;Name=WP_053892436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707878.1;locus_tag=AC57_RS28875;product=hypothetical protein;protein_id=WP_053892436.1;transl_table=11 NZ_JJLR01000058.1 RefSeq gene 8082 8398 . + . ID=gene-AC57_RS16315;Name=AC57_RS16315;end_range=8398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16315;old_locus_tag=AC57_1495;partial=true NZ_JJLR01000058.1 Protein Homology CDS 8082 8398 . + 0 ID=cds-WP_032285672.1;Parent=gene-AC57_RS16315;Dbxref=GenBank:WP_032285672.1;Name=WP_032285672.1;end_range=8398,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707428.1;locus_tag=AC57_RS16315;partial=true;product=hypothetical protein;protein_id=WP_032285672.1;transl_table=11 ##sequence-region NZ_JJLR01000059.1 1 39654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000059.1 RefSeq region 1 39654 . + . ID=NZ_JJLR01000059.1:1..39654;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000059.1 RefSeq pseudogene 1 971 . + . ID=gene-AC57_RS28880;Name=AC57_RS28880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28880;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000059.1 Protein Homology CDS 1 971 . + 2 ID=cds-AC57_RS28880;Parent=gene-AC57_RS28880;Note=internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421020.1;locus_tag=AC57_RS28880;partial=true;product=ISAs1-like element ISEc5 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 1071 1304 . + . ID=gene-AC57_RS16310;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AC57_RS16310;old_locus_tag=AC57_1498 NZ_JJLR01000059.1 Protein Homology CDS 1071 1304 . + 0 ID=cds-WP_001120143.1;Parent=gene-AC57_RS16310;Dbxref=GenBank:WP_001120143.1;Name=WP_001120143.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415978.1;locus_tag=AC57_RS16310;product=tautomerase PptA;protein_id=WP_001120143.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 1301 1870 . - . ID=gene-AC57_RS16305;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=AC57_RS16305;old_locus_tag=AC57_1499 NZ_JJLR01000059.1 Protein Homology CDS 1301 1870 . - 0 ID=cds-WP_032237654.1;Parent=gene-AC57_RS16305;Dbxref=GenBank:WP_032237654.1;Name=WP_032237654.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=yddH;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AC57_RS16305;product=flavin reductase family protein;protein_id=WP_032237654.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 2043 2888 . + . ID=gene-AC57_RS16300;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AC57_RS16300;old_locus_tag=AC57_1500 NZ_JJLR01000059.1 Protein Homology CDS 2043 2888 . + 0 ID=cds-WP_000187925.1;Parent=gene-AC57_RS16300;Dbxref=GenBank:WP_000187925.1;Name=WP_000187925.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AC57_RS16300;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_000187925.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 2984 3877 . - . ID=gene-AC57_RS16295;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=AC57_RS16295;old_locus_tag=AC57_1501 NZ_JJLR01000059.1 Protein Homology CDS 2984 3877 . - 0 ID=cds-WP_032202717.1;Parent=gene-AC57_RS16295;Dbxref=GenBank:WP_032202717.1;Name=WP_032202717.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310094.1;locus_tag=AC57_RS16295;product=PhzF family isomerase;protein_id=WP_032202717.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 3956 4636 . - . ID=gene-AC57_RS16290;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AC57_RS16290;old_locus_tag=AC57_1502 NZ_JJLR01000059.1 Protein Homology CDS 3956 4636 . - 0 ID=cds-WP_032279792.1;Parent=gene-AC57_RS16290;Dbxref=GenBank:WP_032279792.1;Name=WP_032279792.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AC57_RS16290;product=respiratory nitrate reductase subunit gamma;protein_id=WP_032279792.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 4633 5328 . - . ID=gene-AC57_RS16285;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AC57_RS16285;old_locus_tag=AC57_1503 NZ_JJLR01000059.1 Protein Homology CDS 4633 5328 . - 0 ID=cds-WP_001166353.1;Parent=gene-AC57_RS16285;Dbxref=GenBank:WP_001166353.1;Name=WP_001166353.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415983.1;locus_tag=AC57_RS16285;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_001166353.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 5328 6872 . - . ID=gene-AC57_RS16280;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AC57_RS16280;old_locus_tag=AC57_1504 NZ_JJLR01000059.1 Protein Homology CDS 5328 6872 . - 0 ID=cds-WP_000702542.1;Parent=gene-AC57_RS16280;Dbxref=GenBank:WP_000702542.1;Name=WP_000702542.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310097.1;locus_tag=AC57_RS16280;product=nitrate reductase subunit beta;protein_id=WP_000702542.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 6869 10609 . - . ID=gene-AC57_RS16275;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AC57_RS16275;old_locus_tag=AC57_1505 NZ_JJLR01000059.1 Protein Homology CDS 6869 10609 . - 0 ID=cds-WP_032267838.1;Parent=gene-AC57_RS16275;Dbxref=GenBank:WP_032267838.1;Name=WP_032267838.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415985.1;locus_tag=AC57_RS16275;product=nitrate reductase Z subunit alpha;protein_id=WP_032267838.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 10691 12079 . - . ID=gene-AC57_RS16270;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AC57_RS16270;old_locus_tag=AC57_1506 NZ_JJLR01000059.1 Protein Homology CDS 10691 12079 . - 0 ID=cds-WP_001207905.1;Parent=gene-AC57_RS16270;Dbxref=GenBank:WP_001207905.1;Name=WP_001207905.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415986.1;locus_tag=AC57_RS16270;product=nitrate/nitrite transporter NarU;protein_id=WP_001207905.1;transl_table=11 NZ_JJLR01000059.1 RefSeq pseudogene 12403 13733 . - . ID=gene-AC57_RS0123835;Name=AC57_RS0123835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123835;old_locus_tag=AC57_1507;pseudo=true NZ_JJLR01000059.1 Protein Homology CDS 12403 13733 . - 0 ID=cds-AC57_RS0123835;Parent=gene-AC57_RS0123835;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627100.1;locus_tag=AC57_RS0123835;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000059.1 RefSeq pseudogene 13772 14047 . - . ID=gene-AC57_RS16265;Name=yddL;gbkey=Gene;gene=yddL;gene_biotype=pseudogene;locus_tag=AC57_RS16265;old_locus_tag=AC57_1508;partial=true;pseudo=true;start_range=.,13772 NZ_JJLR01000059.1 Protein Homology CDS 13772 14047 . - 0 ID=cds-AC57_RS16265;Parent=gene-AC57_RS16265;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0034220,GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;gene=yddL;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=AC57_RS16265;partial=true;product=porin;pseudo=true;start_range=.,13772;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 14307 15188 . - . ID=gene-AC57_RS16260;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AC57_RS16260;old_locus_tag=AC57_1509 NZ_JJLR01000059.1 Protein Homology CDS 14307 15188 . - 0 ID=cds-WP_000198205.1;Parent=gene-AC57_RS16260;Dbxref=GenBank:WP_000198205.1;Name=WP_000198205.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=AC57_RS16260;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_000198205.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 15420 18467 . + . ID=gene-AC57_RS16250;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AC57_RS16250;old_locus_tag=AC57_1512 NZ_JJLR01000059.1 Protein Homology CDS 15420 18467 . + 0 ID=cds-WP_077759952.1;Parent=gene-AC57_RS16250;Dbxref=GenBank:WP_077759952.1;Name=WP_077759952.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310105.1;locus_tag=AC57_RS16250;product=formate dehydrogenase-N subunit alpha;protein_id=WP_077759952.1;transl_except=(pos:16005..16007%2Caa:Sec);transl_table=11 NZ_JJLR01000059.1 RefSeq gene 18480 19364 . + . ID=gene-AC57_RS16245;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AC57_RS16245;old_locus_tag=AC57_1513 NZ_JJLR01000059.1 Protein Homology CDS 18480 19364 . + 0 ID=cds-WP_001391970.1;Parent=gene-AC57_RS16245;Dbxref=GenBank:WP_001391970.1;Name=WP_001391970.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AC57_RS16245;product=formate dehydrogenase N subunit beta;protein_id=WP_001391970.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 19357 20010 . + . ID=gene-AC57_RS16240;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AC57_RS16240;old_locus_tag=AC57_1514 NZ_JJLR01000059.1 Protein Homology CDS 19357 20010 . + 0 ID=cds-WP_000045648.1;Parent=gene-AC57_RS16240;Dbxref=GenBank:WP_000045648.1;Name=WP_000045648.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AC57_RS16240;product=formate dehydrogenase-N subunit gamma;protein_id=WP_000045648.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 20239 20523 . - . ID=gene-AC57_RS16235;Name=yddM;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=AC57_RS16235;old_locus_tag=AC57_1515 NZ_JJLR01000059.1 Protein Homology CDS 20239 20523 . - 0 ID=cds-WP_000781370.1;Parent=gene-AC57_RS16235;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yddM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AC57_RS16235;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 20668 21678 . - . ID=gene-AC57_RS16230;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AC57_RS16230;old_locus_tag=AC57_1516 NZ_JJLR01000059.1 Protein Homology CDS 20668 21678 . - 0 ID=cds-WP_032279794.1;Parent=gene-AC57_RS16230;Dbxref=GenBank:WP_032279794.1;Name=WP_032279794.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415995.4;locus_tag=AC57_RS16230;product=alcohol dehydrogenase AdhP;protein_id=WP_032279794.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 21812 23509 . - . ID=gene-AC57_RS16225;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AC57_RS16225;old_locus_tag=AC57_1517 NZ_JJLR01000059.1 Protein Homology CDS 21812 23509 . - 0 ID=cds-WP_000433476.1;Parent=gene-AC57_RS16225;Dbxref=GenBank:WP_000433476.1;Name=WP_000433476.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415996.2;locus_tag=AC57_RS16225;product=malate dehydrogenase;protein_id=WP_000433476.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 23666 23803 . - . ID=gene-AC57_RS16220;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AC57_RS16220;old_locus_tag=AC57_1518 NZ_JJLR01000059.1 Protein Homology CDS 23666 23803 . - 0 ID=cds-WP_000841554.1;Parent=gene-AC57_RS16220;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AC57_RS16220;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 23905 24120 . - . ID=gene-AC57_RS16215;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AC57_RS16215;old_locus_tag=AC57_1519 NZ_JJLR01000059.1 Protein Homology CDS 23905 24120 . - 0 ID=cds-WP_000495771.1;Parent=gene-AC57_RS16215;Dbxref=GenBank:WP_000495771.1;Name=WP_000495771.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415998.4;locus_tag=AC57_RS16215;product=biofilm-dependent modulation protein;protein_id=WP_000495771.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 24465 24896 . + . ID=gene-AC57_RS16210;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AC57_RS16210;old_locus_tag=AC57_1520 NZ_JJLR01000059.1 Protein Homology CDS 24465 24896 . + 0 ID=cds-WP_000152305.1;Parent=gene-AC57_RS16210;Dbxref=GenBank:WP_000152305.1;Name=WP_000152305.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AC57_RS16210;product=peroxiredoxin OsmC;protein_id=WP_000152305.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 24952 25878 . - . ID=gene-AC57_RS16205;Name=ddpF;gbkey=Gene;gene=ddpF;gene_biotype=protein_coding;locus_tag=AC57_RS16205;old_locus_tag=AC57_1521 NZ_JJLR01000059.1 Protein Homology CDS 24952 25878 . - 0 ID=cds-WP_001285555.1;Parent=gene-AC57_RS16205;Dbxref=GenBank:WP_001285555.1;Name=WP_001285555.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;gene=ddpF;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AC57_RS16205;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_001285555.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 25871 26857 . - . ID=gene-AC57_RS16200;Name=ddpD;gbkey=Gene;gene=ddpD;gene_biotype=protein_coding;locus_tag=AC57_RS16200;old_locus_tag=AC57_1522 NZ_JJLR01000059.1 Protein Homology CDS 25871 26857 . - 0 ID=cds-WP_000193568.1;Parent=gene-AC57_RS16200;Dbxref=GenBank:WP_000193568.1;Name=WP_000193568.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ddpD;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416001.1;locus_tag=AC57_RS16200;product=ABC transporter ATP-binding protein;protein_id=WP_000193568.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 26854 27750 . - . ID=gene-AC57_RS16195;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AC57_RS16195;old_locus_tag=AC57_1523 NZ_JJLR01000059.1 Protein Homology CDS 26854 27750 . - 0 ID=cds-WP_000979629.1;Parent=gene-AC57_RS16195;Dbxref=GenBank:WP_000979629.1;Name=WP_000979629.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=AC57_RS16195;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_000979629.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 27747 28769 . - . ID=gene-AC57_RS16190;Name=ddpB;gbkey=Gene;gene=ddpB;gene_biotype=protein_coding;locus_tag=AC57_RS16190;old_locus_tag=AC57_1524 NZ_JJLR01000059.1 Protein Homology CDS 27747 28769 . - 0 ID=cds-WP_000145104.1;Parent=gene-AC57_RS16190;Dbxref=GenBank:WP_000145104.1;Name=WP_000145104.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ddpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AC57_RS16190;product=ABC transporter permease;protein_id=WP_000145104.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 28771 30321 . - . ID=gene-AC57_RS16185;Name=ddpA;gbkey=Gene;gene=ddpA;gene_biotype=protein_coding;locus_tag=AC57_RS16185;old_locus_tag=AC57_1525 NZ_JJLR01000059.1 Protein Homology CDS 28771 30321 . - 0 ID=cds-WP_000830565.1;Parent=gene-AC57_RS16185;Dbxref=GenBank:WP_000830565.1;Name=WP_000830565.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;gene=ddpA;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310118.1;locus_tag=AC57_RS16185;product=ABC transporter substrate-binding protein;protein_id=WP_000830565.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 30335 30916 . - . ID=gene-AC57_RS16180;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AC57_RS16180;old_locus_tag=AC57_1526 NZ_JJLR01000059.1 Protein Homology CDS 30335 30916 . - 0 ID=cds-WP_032285673.1;Parent=gene-AC57_RS16180;Dbxref=GenBank:WP_032285673.1;Name=WP_032285673.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310119.1;locus_tag=AC57_RS16180;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_032285673.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 31174 33585 . - . ID=gene-AC57_RS16175;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AC57_RS16175;old_locus_tag=AC57_1527 NZ_JJLR01000059.1 Protein Homology CDS 31174 33585 . - 0 ID=cds-WP_077756420.1;Parent=gene-AC57_RS16175;Dbxref=GenBank:WP_077756420.1;Name=WP_077756420.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AC57_RS16175;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;protein_id=WP_077756420.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 33610 34992 . - . ID=gene-AC57_RS16170;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AC57_RS16170;old_locus_tag=AC57_1528 NZ_JJLR01000059.1 Protein Homology CDS 33610 34992 . - 0 ID=cds-WP_000426292.1;Parent=gene-AC57_RS16170;Dbxref=GenBank:WP_000426292.1;Name=WP_000426292.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AC57_RS16170;product=diguanylate cyclase DosC;protein_id=WP_000426292.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 35356 36675 . - . ID=gene-AC57_RS16165;Name=digH;gbkey=Gene;gene=digH;gene_biotype=protein_coding;locus_tag=AC57_RS16165;old_locus_tag=AC57_1529 NZ_JJLR01000059.1 Protein Homology CDS 35356 36675 . - 0 ID=cds-WP_000350395.1;Parent=gene-AC57_RS16165;Dbxref=GenBank:WP_000350395.1;Name=WP_000350395.1;Ontology_term=GO:0016798;gbkey=CDS;gene=digH;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AC57_RS16165;product=family 10 glycosylhydrolase;protein_id=WP_000350395.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 36806 38341 . - . ID=gene-AC57_RS16160;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AC57_RS16160;old_locus_tag=AC57_1530 NZ_JJLR01000059.1 Protein Homology CDS 36806 38341 . - 0 ID=cds-WP_000246019.1;Parent=gene-AC57_RS16160;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AC57_RS16160;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JJLR01000059.1 RefSeq gene 38497 39654 . - . ID=gene-AC57_RS16155;Name=AC57_RS16155;end_range=39654,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16155;old_locus_tag=AC57_1531;partial=true NZ_JJLR01000059.1 Protein Homology CDS 38497 39654 . - 0 ID=cds-WP_000607602.1;Parent=gene-AC57_RS16155;Dbxref=GenBank:WP_000607602.1;Name=WP_000607602.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;end_range=39654,.;gbkey=CDS;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC57_RS16155;partial=true;product=glutamate decarboxylase;protein_id=WP_000607602.1;transl_table=11 ##sequence-region NZ_JJLR01000060.1 1 50530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000060.1 RefSeq region 1 50530 . + . ID=NZ_JJLR01000060.1:1..50530;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000060.1 RefSeq gene 1 1139 . - . ID=gene-AC57_RS16150;Name=AC57_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16150;old_locus_tag=AC57_1532;partial=true;start_range=.,1 NZ_JJLR01000060.1 Protein Homology CDS 1 1139 . - 0 ID=cds-WP_050440070.1;Parent=gene-AC57_RS16150;Dbxref=GenBank:WP_050440070.1;Name=WP_050440070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575699.1;locus_tag=AC57_RS16150;partial=true;product=type II secretion system protein GspD;protein_id=WP_050440070.1;start_range=.,1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 1587 2798 . - . ID=gene-AC57_RS16145;Name=AC57_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16145;old_locus_tag=AC57_1534 NZ_JJLR01000060.1 Protein Homology CDS 1587 2798 . - 0 ID=cds-WP_032268386.1;Parent=gene-AC57_RS16145;Dbxref=GenBank:WP_032268386.1;Name=WP_032268386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575701.1;locus_tag=AC57_RS16145;product=zonular occludens toxin domain-containing protein;protein_id=WP_032268386.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 2801 3157 . - . ID=gene-AC57_RS0123840;Name=AC57_RS0123840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123840;old_locus_tag=AC57_1535 NZ_JJLR01000060.1 GeneMarkS-2+ CDS 2801 3157 . - 0 ID=cds-WP_000494577.1;Parent=gene-AC57_RS0123840;Dbxref=GenBank:WP_000494577.1;Name=WP_000494577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0123840;product=hypothetical protein;protein_id=WP_000494577.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 3160 4467 . - . ID=gene-AC57_RS26025;Name=AC57_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26025;old_locus_tag=AC57_1536 NZ_JJLR01000060.1 GeneMarkS-2+ CDS 3160 4467 . - 0 ID=cds-WP_148725149.1;Parent=gene-AC57_RS26025;Dbxref=GenBank:WP_148725149.1;Name=WP_148725149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS26025;product=hypothetical protein;protein_id=WP_148725149.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 4528 4770 . - . ID=gene-AC57_RS16140;Name=AC57_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16140;old_locus_tag=AC57_1537 NZ_JJLR01000060.1 Protein Homology CDS 4528 4770 . - 0 ID=cds-WP_032179868.1;Parent=gene-AC57_RS16140;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AC57_RS16140;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 4795 4965 . - . ID=gene-AC57_RS30240;Name=AC57_RS30240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30240;old_locus_tag=AC57_1538 NZ_JJLR01000060.1 Protein Homology CDS 4795 4965 . - 0 ID=cds-WP_000134226.1;Parent=gene-AC57_RS30240;Dbxref=GenBank:WP_000134226.1;Name=WP_000134226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AC57_RS30240;product=hypothetical protein;protein_id=WP_000134226.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 4958 5098 . - . ID=gene-AC57_RS30245;Name=AC57_RS30245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30245;old_locus_tag=AC57_1539 NZ_JJLR01000060.1 Protein Homology CDS 4958 5098 . - 0 ID=cds-WP_001422058.1;Parent=gene-AC57_RS30245;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AC57_RS30245;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 5103 5528 . - . ID=gene-AC57_RS16135;Name=AC57_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16135;old_locus_tag=AC57_1540 NZ_JJLR01000060.1 Protein Homology CDS 5103 5528 . - 0 ID=cds-WP_032179869.1;Parent=gene-AC57_RS16135;Dbxref=GenBank:WP_032179869.1;Name=WP_032179869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AC57_RS16135;product=hypothetical protein;protein_id=WP_032179869.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 5559 7559 . - . ID=gene-AC57_RS16130;Name=AC57_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16130;old_locus_tag=AC57_1541 NZ_JJLR01000060.1 Protein Homology CDS 5559 7559 . - 0 ID=cds-WP_032279731.1;Parent=gene-AC57_RS16130;Dbxref=GenBank:WP_032279731.1;Name=WP_032279731.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575774.1;locus_tag=AC57_RS16130;product=replication endonuclease;protein_id=WP_032279731.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 8318 9640 . - . ID=gene-AC57_RS0123855;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AC57_RS0123855;old_locus_tag=AC57_1543 NZ_JJLR01000060.1 Protein Homology CDS 8318 9640 . - 0 ID=cds-WP_001125439.1;Parent=gene-AC57_RS0123855;Dbxref=GenBank:WP_001125439.1;Name=WP_001125439.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AC57_RS0123855;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_001125439.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 9640 9906 . - . ID=gene-AC57_RS16120;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AC57_RS16120;old_locus_tag=AC57_1544 NZ_JJLR01000060.1 Protein Homology CDS 9640 9906 . - 0 ID=cds-WP_001301023.1;Parent=gene-AC57_RS16120;Dbxref=GenBank:WP_001301023.1;Name=WP_001301023.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AC57_RS16120;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001301023.1;transl_table=11 NZ_JJLR01000060.1 RefSeq pseudogene 10129 13051 . - . ID=gene-AC57_RS29745;Name=AC57_RS29745;end_range=13051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29745;partial=true;pseudo=true NZ_JJLR01000060.1 Protein Homology CDS 10129 13051 . - 0 ID=cds-AC57_RS29745;Parent=gene-AC57_RS29745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;end_range=13051,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AC57_RS29745;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000060.1 RefSeq pseudogene 13125 13256 . - . ID=gene-AC57_RS31200;Name=AC57_RS31200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31200;partial=true;pseudo=true;start_range=.,13125 NZ_JJLR01000060.1 Protein Homology CDS 13125 13256 . - 0 ID=cds-AC57_RS31200;Parent=gene-AC57_RS31200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.6;locus_tag=AC57_RS31200;partial=true;product=ESPR-type extended signal peptide-containing protein;pseudo=true;start_range=.,13125;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 13787 15379 . - . ID=gene-AC57_RS16110;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AC57_RS16110;old_locus_tag=AC57_1548 NZ_JJLR01000060.1 Protein Homology CDS 13787 15379 . - 0 ID=cds-WP_000113145.1;Parent=gene-AC57_RS16110;Dbxref=GenBank:WP_000113145.1;Name=WP_000113145.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416028.3;locus_tag=AC57_RS16110;product=autoinducer-2 kinase;protein_id=WP_000113145.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 15458 16411 . - . ID=gene-AC57_RS16105;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AC57_RS16105;old_locus_tag=AC57_1549 NZ_JJLR01000060.1 Protein Homology CDS 15458 16411 . - 0 ID=cds-WP_000154339.1;Parent=gene-AC57_RS16105;Dbxref=GenBank:WP_000154339.1;Name=WP_000154339.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707462.1;locus_tag=AC57_RS16105;product=transcriptional regulator LsrR;protein_id=WP_000154339.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 16660 18195 . + . ID=gene-AC57_RS16100;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=AC57_RS16100;old_locus_tag=AC57_1550 NZ_JJLR01000060.1 Protein Homology CDS 16660 18195 . + 0 ID=cds-WP_032237692.1;Parent=gene-AC57_RS16100;Dbxref=GenBank:WP_032237692.1;Name=WP_032237692.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416030.1;locus_tag=AC57_RS16100;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_032237692.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 18189 19217 . + . ID=gene-AC57_RS16095;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AC57_RS16095;old_locus_tag=AC57_1551 NZ_JJLR01000060.1 Protein Homology CDS 18189 19217 . + 0 ID=cds-WP_000911192.1;Parent=gene-AC57_RS16095;Dbxref=GenBank:WP_000911192.1;Name=WP_000911192.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AC57_RS16095;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_000911192.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 19217 20209 . + . ID=gene-AC57_RS16090;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AC57_RS16090;old_locus_tag=AC57_1552 NZ_JJLR01000060.1 Protein Homology CDS 19217 20209 . + 0 ID=cds-WP_001433011.1;Parent=gene-AC57_RS16090;Dbxref=GenBank:WP_001433011.1;Name=WP_001433011.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AC57_RS16090;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_001433011.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 20221 21243 . + . ID=gene-AC57_RS16085;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AC57_RS16085;old_locus_tag=AC57_1553 NZ_JJLR01000060.1 Protein Homology CDS 20221 21243 . + 0 ID=cds-WP_000172488.1;Parent=gene-AC57_RS16085;Dbxref=GenBank:WP_000172488.1;Name=WP_000172488.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AC57_RS16085;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_000172488.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 21270 22145 . + . ID=gene-AC57_RS16080;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AC57_RS16080;old_locus_tag=AC57_1554 NZ_JJLR01000060.1 Protein Homology CDS 21270 22145 . + 0 ID=cds-WP_000774189.1;Parent=gene-AC57_RS16080;Dbxref=GenBank:WP_000774189.1;Name=WP_000774189.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310151.1;locus_tag=AC57_RS16080;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_000774189.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 22169 22459 . + . ID=gene-AC57_RS16075;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AC57_RS16075;old_locus_tag=AC57_1555 NZ_JJLR01000060.1 Protein Homology CDS 22169 22459 . + 0 ID=cds-WP_000558527.1;Parent=gene-AC57_RS16075;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AC57_RS16075;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 22516 23274 . + . ID=gene-AC57_RS16070;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AC57_RS16070;old_locus_tag=AC57_1556 NZ_JJLR01000060.1 Protein Homology CDS 22516 23274 . + 0 ID=cds-WP_001286597.1;Parent=gene-AC57_RS16070;Dbxref=GenBank:WP_001286597.1;Name=WP_001286597.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416036.1;locus_tag=AC57_RS16070;product=trans-aconitate 2-methyltransferase;protein_id=WP_001286597.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 23278 24192 . - . ID=gene-AC57_RS16065;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=AC57_RS16065;old_locus_tag=AC57_1557 NZ_JJLR01000060.1 Protein Homology CDS 23278 24192 . - 0 ID=cds-WP_001351738.1;Parent=gene-AC57_RS16065;Dbxref=GenBank:WP_001351738.1;Name=WP_001351738.1;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AC57_RS16065;product=bestrophin family protein;protein_id=WP_001351738.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 24399 25850 . - . ID=gene-AC57_RS16060;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AC57_RS16060;old_locus_tag=AC57_1558 NZ_JJLR01000060.1 Protein Homology CDS 24399 25850 . - 0 ID=cds-WP_000854624.1;Parent=gene-AC57_RS16060;Dbxref=GenBank:WP_000854624.1;Name=WP_000854624.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AC57_RS16060;product=tagaturonate reductase;protein_id=WP_000854624.1;transl_table=11 NZ_JJLR01000060.1 RefSeq pseudogene 26076 27062 . - . ID=gene-AC57_RS16055;Name=dgcF;end_range=27062,.;gbkey=Gene;gene=dgcF;gene_biotype=pseudogene;locus_tag=AC57_RS16055;old_locus_tag=AC57_1560;partial=true;pseudo=true NZ_JJLR01000060.1 Protein Homology CDS 26076 27062 . - 0 ID=cds-AC57_RS16055;Parent=gene-AC57_RS16055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;end_range=27062,.;gbkey=CDS;gene=dgcF;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AC57_RS16055;partial=true;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 27135 27494 . - . ID=gene-AC57_RS16050;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AC57_RS16050;old_locus_tag=AC57_1561 NZ_JJLR01000060.1 Protein Homology CDS 27135 27494 . - 0 ID=cds-WP_001191019.1;Parent=gene-AC57_RS16050;Dbxref=GenBank:WP_001191019.1;Name=WP_001191019.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416040.1;locus_tag=AC57_RS16050;product=DUF4186 domain-containing protein;protein_id=WP_001191019.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 27494 28420 . - . ID=gene-AC57_RS16045;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AC57_RS16045;old_locus_tag=AC57_1562 NZ_JJLR01000060.1 Protein Homology CDS 27494 28420 . - 0 ID=cds-WP_000257409.1;Parent=gene-AC57_RS16045;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AC57_RS16045;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 28484 29872 . - . ID=gene-AC57_RS16040;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AC57_RS16040;old_locus_tag=AC57_1563 NZ_JJLR01000060.1 Protein Homology CDS 28484 29872 . - 0 ID=cds-WP_000156615.1;Parent=gene-AC57_RS16040;Dbxref=GenBank:WP_000156615.1;Name=WP_000156615.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AC57_RS16040;product=succinate-semialdehyde dehydrogenase;protein_id=WP_000156615.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 29973 30854 . + . ID=gene-AC57_RS16035;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AC57_RS16035;old_locus_tag=AC57_1564 NZ_JJLR01000060.1 Protein Homology CDS 29973 30854 . + 0 ID=cds-WP_000366501.1;Parent=gene-AC57_RS16035;Dbxref=GenBank:WP_000366501.1;Name=WP_000366501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416043.1;locus_tag=AC57_RS16035;product=putrescine utilization regulator PtrR;protein_id=WP_000366501.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 30932 32047 . + . ID=gene-AC57_RS16030;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;locus_tag=AC57_RS16030;old_locus_tag=AC57_1565 NZ_JJLR01000060.1 Protein Homology CDS 30932 32047 . + 0 ID=cds-WP_000258600.1;Parent=gene-AC57_RS16030;Dbxref=GenBank:WP_000258600.1;Name=WP_000258600.1;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=AC57_RS16030;product=putative protein YneK;protein_id=WP_000258600.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 32197 33387 . + . ID=gene-AC57_RS16025;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AC57_RS16025;old_locus_tag=AC57_1567 NZ_JJLR01000060.1 Protein Homology CDS 32197 33387 . + 0 ID=cds-WP_000210799.1;Parent=gene-AC57_RS16025;Dbxref=GenBank:WP_000210799.1;Name=WP_000210799.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AC57_RS16025;product=L-arabinose MFS transporter;protein_id=WP_000210799.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 33412 34077 . - . ID=gene-AC57_RS16020;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AC57_RS16020;old_locus_tag=AC57_1568 NZ_JJLR01000060.1 Protein Homology CDS 33412 34077 . - 0 ID=cds-WP_032279730.1;Parent=gene-AC57_RS16020;Dbxref=GenBank:WP_032279730.1;Name=WP_032279730.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AC57_RS16020;product=NAAT family transporter MarC;protein_id=WP_032279730.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 34198 34482 . - . ID=gene-AC57_RS16015;Name=AC57_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS16015;old_locus_tag=AC57_1569 NZ_JJLR01000060.1 Protein Homology CDS 34198 34482 . - 0 ID=cds-WP_000268704.1;Parent=gene-AC57_RS16015;Dbxref=GenBank:WP_000268704.1;Name=WP_000268704.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000268704.1;locus_tag=AC57_RS16015;product=helix-turn-helix domain-containing protein;protein_id=WP_000268704.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 34472 34792 . - . ID=gene-AC57_RS0123870;Name=AC57_RS0123870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123870 NZ_JJLR01000060.1 Protein Homology CDS 34472 34792 . - 0 ID=cds-WP_000273128.1;Parent=gene-AC57_RS0123870;Dbxref=GenBank:WP_000273128.1;Name=WP_000273128.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000273128.1;locus_tag=AC57_RS0123870;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000273128.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 35012 35446 . + . ID=gene-AC57_RS16010;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AC57_RS16010;old_locus_tag=AC57_1570 NZ_JJLR01000060.1 Protein Homology CDS 35012 35446 . + 0 ID=cds-WP_000843419.1;Parent=gene-AC57_RS16010;Dbxref=GenBank:WP_000843419.1;Name=WP_000843419.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310164.2;locus_tag=AC57_RS16010;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843419.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 35467 35850 . + . ID=gene-AC57_RS16005;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AC57_RS16005;old_locus_tag=AC57_1571 NZ_JJLR01000060.1 Protein Homology CDS 35467 35850 . + 0 ID=cds-WP_000091199.1;Parent=gene-AC57_RS16005;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AC57_RS16005;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 35882 36100 . + . ID=gene-AC57_RS0123875;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AC57_RS0123875 NZ_JJLR01000060.1 Protein Homology CDS 35882 36100 . + 0 ID=cds-WP_000803654.1;Parent=gene-AC57_RS0123875;Dbxref=GenBank:WP_000803654.1;Name=WP_000803654.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416049.1;locus_tag=AC57_RS0123875;product=multiple antibiotic resistance protein MarB;protein_id=WP_000803654.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 36131 37030 . - . ID=gene-AC57_RS16000;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AC57_RS16000;old_locus_tag=AC57_1572 NZ_JJLR01000060.1 Protein Homology CDS 36131 37030 . - 0 ID=cds-WP_000087211.1;Parent=gene-AC57_RS16000;Dbxref=GenBank:WP_000087211.1;Name=WP_000087211.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416050.4;locus_tag=AC57_RS16000;product=O-acetylserine/cysteine exporter;protein_id=WP_000087211.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 37225 38412 . + . ID=gene-AC57_RS15995;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AC57_RS15995;old_locus_tag=AC57_1573 NZ_JJLR01000060.1 Protein Homology CDS 37225 38412 . + 0 ID=cds-WP_001054196.1;Parent=gene-AC57_RS15995;Dbxref=GenBank:WP_001054196.1;Name=WP_001054196.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AC57_RS15995;product=efflux MFS transporter YdeE;protein_id=WP_001054196.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 38539 38634 . + . ID=gene-AC57_RS0123880;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AC57_RS0123880 NZ_JJLR01000060.1 Protein Homology CDS 38539 38634 . + 0 ID=cds-WP_000901367.1;Parent=gene-AC57_RS0123880;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AC57_RS0123880;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 38634 38738 . + . ID=gene-AC57_RS30510;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=AC57_RS30510 NZ_JJLR01000060.1 Protein Homology CDS 38634 38738 . + 0 ID=cds-WP_211180496.1;Parent=gene-AC57_RS30510;Dbxref=GenBank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AC57_RS30510;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 38853 39743 . - . ID=gene-AC57_RS15990;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AC57_RS15990;old_locus_tag=AC57_1574 NZ_JJLR01000060.1 Protein Homology CDS 38853 39743 . - 0 ID=cds-WP_001598469.1;Parent=gene-AC57_RS15990;Dbxref=GenBank:WP_001598469.1;Name=WP_001598469.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AC57_RS15990;product=diguanylate cyclase DgcZ;protein_id=WP_001598469.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 39998 40390 . - . ID=gene-AC57_RS15985;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AC57_RS15985;old_locus_tag=AC57_1575 NZ_JJLR01000060.1 Protein Homology CDS 39998 40390 . - 0 ID=cds-WP_032237929.1;Parent=gene-AC57_RS15985;Dbxref=GenBank:WP_032237929.1;Name=WP_032237929.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AC57_RS15985;product=YdeI family stress tolerance OB fold protein;protein_id=WP_032237929.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 40666 41184 . + . ID=gene-AC57_RS15980;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=AC57_RS15980;old_locus_tag=AC57_1576 NZ_JJLR01000060.1 Protein Homology CDS 40666 41184 . + 0 ID=cds-WP_001024808.1;Parent=gene-AC57_RS15980;Dbxref=GenBank:WP_001024808.1;Name=WP_001024808.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707440.1;locus_tag=AC57_RS15980;product=2-oxo-tetronate isomerase;protein_id=WP_001024808.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 41229 43274 . - . ID=gene-AC57_RS15975;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AC57_RS15975;old_locus_tag=AC57_1577 NZ_JJLR01000060.1 Protein Homology CDS 41229 43274 . - 0 ID=cds-WP_001437709.1;Parent=gene-AC57_RS15975;Dbxref=GenBank:WP_001437709.1;Name=WP_001437709.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310174.1;locus_tag=AC57_RS15975;product=peptidyl-dipeptidase Dcp;protein_id=WP_001437709.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 43411 44157 . + . ID=gene-AC57_RS15970;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AC57_RS15970;old_locus_tag=AC57_1578 NZ_JJLR01000060.1 Protein Homology CDS 43411 44157 . + 0 ID=cds-WP_000636571.1;Parent=gene-AC57_RS15970;Dbxref=GenBank:WP_000636571.1;Name=WP_000636571.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416057.1;locus_tag=AC57_RS15970;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_000636571.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 44246 44932 . + . ID=gene-AC57_RS15965;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AC57_RS15965;old_locus_tag=AC57_1579 NZ_JJLR01000060.1 Protein Homology CDS 44246 44932 . + 0 ID=cds-WP_000215549.1;Parent=gene-AC57_RS15965;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AC57_RS15965;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 45110 45313 . + . ID=gene-AC57_RS15960;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AC57_RS15960;old_locus_tag=AC57_1580 NZ_JJLR01000060.1 Protein Homology CDS 45110 45313 . + 0 ID=cds-WP_000214712.1;Parent=gene-AC57_RS15960;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AC57_RS15960;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 45349 46809 . - . ID=gene-AC57_RS15955;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=AC57_RS15955;old_locus_tag=AC57_1581 NZ_JJLR01000060.1 Protein Homology CDS 45349 46809 . - 0 ID=cds-WP_001752530.1;Parent=gene-AC57_RS15955;Dbxref=GenBank:WP_001752530.1;Name=WP_001752530.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ydfI;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707435.1;locus_tag=AC57_RS15955;product=mannitol dehydrogenase family protein;protein_id=WP_001752530.1;transl_table=11 NZ_JJLR01000060.1 RefSeq pseudogene 46898 48181 . - . ID=gene-AC57_RS15950;Name=ydfJ;end_range=48181,.;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;locus_tag=AC57_RS15950;old_locus_tag=AC57_1582;partial=true;pseudo=true NZ_JJLR01000060.1 Protein Homology CDS 46898 48181 . - 0 ID=cds-AC57_RS15950;Parent=gene-AC57_RS15950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=48181,.;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AC57_RS15950;partial=true;product=MHS family MFS transporter YdfJ;pseudo=true;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 48785 48898 . + . ID=gene-AC57_RS29755;Name=ynfT;gbkey=Gene;gene=ynfT;gene_biotype=protein_coding;locus_tag=AC57_RS29755 NZ_JJLR01000060.1 Protein Homology CDS 48785 48898 . + 0 ID=cds-WP_120795384.1;Parent=gene-AC57_RS29755;Dbxref=GenBank:WP_120795384.1;Name=WP_120795384.1;gbkey=CDS;gene=ynfT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518779.1;locus_tag=AC57_RS29755;product=YnaM/YnfT family protein;protein_id=WP_120795384.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 48967 49200 . + . ID=gene-AC57_RS0123885;Name=ydfK;gbkey=Gene;gene=ydfK;gene_biotype=protein_coding;locus_tag=AC57_RS0123885;old_locus_tag=AC57_1583 NZ_JJLR01000060.1 Protein Homology CDS 48967 49200 . + 0 ID=cds-WP_000836767.1;Parent=gene-AC57_RS0123885;Dbxref=GenBank:WP_000836767.1;Name=WP_000836767.1;gbkey=CDS;gene=ydfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416062.2;locus_tag=AC57_RS0123885;product=cold shock protein YdfK;protein_id=WP_000836767.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 49517 50107 . + . ID=gene-AC57_RS15945;Name=pinQ;gbkey=Gene;gene=pinQ;gene_biotype=protein_coding;locus_tag=AC57_RS15945;old_locus_tag=AC57_1584 NZ_JJLR01000060.1 Protein Homology CDS 49517 50107 . + 0 ID=cds-WP_000086525.1;Parent=gene-AC57_RS15945;Dbxref=GenBank:WP_000086525.1;Name=WP_000086525.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;gene=pinQ;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415892.1;locus_tag=AC57_RS15945;product=recombinase family protein;protein_id=WP_000086525.1;transl_table=11 NZ_JJLR01000060.1 RefSeq gene 50205 50530 . - . ID=gene-AC57_RS15940;Name=AC57_RS15940;end_range=50530,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15940;old_locus_tag=AC57_1585;partial=true NZ_JJLR01000060.1 Protein Homology CDS 50205 50530 . - 2 ID=cds-WP_032285676.1;Parent=gene-AC57_RS15940;Dbxref=GenBank:WP_032285676.1;Name=WP_032285676.1;Ontology_term=GO:0098004;end_range=50530,.;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AC57_RS15940;partial=true;product=tail fiber assembly protein;protein_id=WP_032285676.1;transl_table=11 ##sequence-region NZ_JJLR01000061.1 1 34744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000061.1 RefSeq region 1 34744 . + . ID=NZ_JJLR01000061.1:1..34744;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000061.1 RefSeq gene 1 182 . - . ID=gene-AC57_RS15935;Name=AC57_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15935;old_locus_tag=AC57_1586;partial=true;start_range=.,1 NZ_JJLR01000061.1 Protein Homology CDS 1 182 . - 0 ID=cds-WP_000179194.1-2;Parent=gene-AC57_RS15935;Dbxref=GenBank:WP_000179194.1;Name=WP_000179194.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS15935;partial=true;product=IS1 family transposase;protein_id=WP_000179194.1;start_range=.,1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 276 455 . + . ID=gene-AC57_RS15930;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AC57_RS15930;old_locus_tag=AC57_1587 NZ_JJLR01000061.1 Protein Homology CDS 276 455 . + 0 ID=cds-WP_000807651.1;Parent=gene-AC57_RS15930;Dbxref=GenBank:WP_000807651.1;Name=WP_000807651.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AC57_RS15930;product=general stress protein;protein_id=WP_000807651.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 541 1041 . + . ID=gene-AC57_RS15925;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AC57_RS15925;old_locus_tag=AC57_1588 NZ_JJLR01000061.1 Protein Homology CDS 541 1041 . + 0 ID=cds-WP_001056490.1;Parent=gene-AC57_RS15925;Dbxref=GenBank:WP_001056490.1;Name=WP_001056490.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415774.1;locus_tag=AC57_RS15925;product=ferritin-like domain-containing protein;protein_id=WP_001056490.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 1087 1593 . + . ID=gene-AC57_RS15920;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=AC57_RS15920;old_locus_tag=AC57_1589 NZ_JJLR01000061.1 Protein Homology CDS 1087 1593 . + 0 ID=cds-WP_001079505.1;Parent=gene-AC57_RS15920;Dbxref=GenBank:WP_001079505.1;Name=WP_001079505.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415773.1;locus_tag=AC57_RS15920;product=ferritin-like domain-containing protein;protein_id=WP_001079505.1;transl_table=11 NZ_JJLR01000061.1 RefSeq pseudogene 1653 1778 . - . ID=gene-AC57_RS26975;Name=AC57_RS26975;end_range=1778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26975;old_locus_tag=AC57_1590;partial=true;pseudo=true NZ_JJLR01000061.1 Protein Homology CDS 1653 1778 . - 0 ID=cds-AC57_RS26975;Parent=gene-AC57_RS26975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;end_range=1778,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AC57_RS26975;partial=true;product=OmpW family outer membrane protein;pseudo=true;transl_table=11 NZ_JJLR01000061.1 RefSeq pseudogene 2001 2270 . - . ID=gene-AC57_RS31205;Name=AC57_RS31205;end_range=2270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31205;partial=true;pseudo=true NZ_JJLR01000061.1 Protein Homology CDS 2001 2270 . - 0 ID=cds-AC57_RS31205;Parent=gene-AC57_RS31205;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701868.1;locus_tag=AC57_RS31205;partial=true;product=DUF4376 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000061.1 RefSeq pseudogene 2367 2543 . - . ID=gene-AC57_RS30665;Name=AC57_RS30665;end_range=2543,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30665;old_locus_tag=AC57_1592;partial=true;pseudo=true NZ_JJLR01000061.1 Protein Homology CDS 2367 2543 . - 0 ID=cds-AC57_RS30665;Parent=gene-AC57_RS30665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2543,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AC57_RS30665;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 2693 3361 . + . ID=gene-AC57_RS0123890;Name=AC57_RS0123890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123890 NZ_JJLR01000061.1 Protein Homology CDS 2693 3361 . + 0 ID=cds-WP_000240999.1;Parent=gene-AC57_RS0123890;Dbxref=GenBank:WP_000240999.1;Name=WP_000240999.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AC57_RS0123890;product=class I SAM-dependent methyltransferase;protein_id=WP_000240999.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 3306 3443 . - . ID=gene-AC57_RS31125;Name=AC57_RS31125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31125 NZ_JJLR01000061.1 Protein Homology CDS 3306 3443 . - 0 ID=cds-WP_001309429.1;Parent=gene-AC57_RS31125;Dbxref=GenBank:WP_001309429.1;Name=WP_001309429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309429.1;locus_tag=AC57_RS31125;product=hypothetical protein;protein_id=WP_001309429.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 3416 4000 . - . ID=gene-AC57_RS15905;Name=AC57_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15905;old_locus_tag=AC57_1593 NZ_JJLR01000061.1 Protein Homology CDS 3416 4000 . - 0 ID=cds-WP_032285678.1;Parent=gene-AC57_RS15905;Dbxref=GenBank:WP_032285678.1;Name=WP_032285678.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AC57_RS15905;product=tail fiber assembly protein;protein_id=WP_032285678.1;transl_table=11 NZ_JJLR01000061.1 RefSeq pseudogene 4000 4149 . - . ID=gene-AC57_RS31210;Name=AC57_RS31210;end_range=4149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31210;partial=true;pseudo=true NZ_JJLR01000061.1 Protein Homology CDS 4000 4149 . - 0 ID=cds-AC57_RS31210;Parent=gene-AC57_RS31210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309677.1;locus_tag=AC57_RS31210;partial=true;product=phage tail protein;pseudo=true;transl_table=11 NZ_JJLR01000061.1 RefSeq pseudogene 4342 6801 . - . ID=gene-AC57_RS0123895;Name=AC57_RS0123895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123895;partial=true;pseudo=true;start_range=.,4342 NZ_JJLR01000061.1 Protein Homology CDS 4342 6801 . - 0 ID=cds-AC57_RS0123895;Parent=gene-AC57_RS0123895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309677.1;locus_tag=AC57_RS0123895;partial=true;product=prophage tail fiber N-terminal domain-containing protein;pseudo=true;start_range=.,4342;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 6953 7552 . - . ID=gene-AC57_RS15900;Name=AC57_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15900;old_locus_tag=AC57_1597 NZ_JJLR01000061.1 Protein Homology CDS 6953 7552 . - 0 ID=cds-WP_001228316.1;Parent=gene-AC57_RS15900;Dbxref=GenBank:WP_001228316.1;Name=WP_001228316.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309834.1;locus_tag=AC57_RS15900;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001228316.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 7620 11093 . - . ID=gene-AC57_RS15895;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AC57_RS15895;old_locus_tag=AC57_1598 NZ_JJLR01000061.1 Protein Homology CDS 7620 11093 . - 0 ID=cds-WP_032279877.1;Parent=gene-AC57_RS15895;Dbxref=GenBank:WP_032279877.1;Name=WP_032279877.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309833.1;locus_tag=AC57_RS15895;product=phage attachment tail tip protein J;protein_id=WP_032279877.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 11436 12017 . - . ID=gene-AC57_RS15890;Name=AC57_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15890;old_locus_tag=AC57_1599 NZ_JJLR01000061.1 Protein Homology CDS 11436 12017 . - 0 ID=cds-WP_032279876.1;Parent=gene-AC57_RS15890;Dbxref=GenBank:WP_032279876.1;Name=WP_032279876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310263.2;locus_tag=AC57_RS15890;product=tail assembly protein;protein_id=WP_032279876.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 12014 12757 . - . ID=gene-AC57_RS15885;Name=AC57_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15885;old_locus_tag=AC57_1600 NZ_JJLR01000061.1 Protein Homology CDS 12014 12757 . - 0 ID=cds-WP_000194723.1;Parent=gene-AC57_RS15885;Dbxref=GenBank:WP_000194723.1;Name=WP_000194723.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310264.2;locus_tag=AC57_RS15885;product=C40 family peptidase;protein_id=WP_000194723.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 12768 13466 . - . ID=gene-AC57_RS15880;Name=AC57_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15880;old_locus_tag=AC57_1601 NZ_JJLR01000061.1 Protein Homology CDS 12768 13466 . - 0 ID=cds-WP_001296027.1;Parent=gene-AC57_RS15880;Dbxref=GenBank:WP_001296027.1;Name=WP_001296027.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310191.1;locus_tag=AC57_RS15880;product=phage minor tail protein L;protein_id=WP_001296027.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 13466 13807 . - . ID=gene-AC57_RS15875;Name=AC57_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15875;old_locus_tag=AC57_1602 NZ_JJLR01000061.1 Protein Homology CDS 13466 13807 . - 0 ID=cds-WP_000807937.1;Parent=gene-AC57_RS15875;Dbxref=GenBank:WP_000807937.1;Name=WP_000807937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309831.1;locus_tag=AC57_RS15875;product=phage tail protein;protein_id=WP_000807937.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 13800 17042 . - . ID=gene-AC57_RS15870;Name=AC57_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15870;old_locus_tag=AC57_1603 NZ_JJLR01000061.1 Protein Homology CDS 13800 17042 . - 0 ID=cds-WP_032279874.1;Parent=gene-AC57_RS15870;Dbxref=GenBank:WP_032279874.1;Name=WP_032279874.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304285.1;locus_tag=AC57_RS15870;product=phage tail tape measure protein;protein_id=WP_032279874.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 17090 17371 . - . ID=gene-AC57_RS0123900;Name=AC57_RS0123900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123900;old_locus_tag=AC57_1604 NZ_JJLR01000061.1 Protein Homology CDS 17090 17371 . - 0 ID=cds-WP_001234278.1;Parent=gene-AC57_RS0123900;Dbxref=GenBank:WP_001234278.1;Name=WP_001234278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234272.1;locus_tag=AC57_RS0123900;product=phage tail assembly protein T;protein_id=WP_001234278.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 17395 17769 . - . ID=gene-AC57_RS15865;Name=AC57_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15865;old_locus_tag=AC57_1605 NZ_JJLR01000061.1 Protein Homology CDS 17395 17769 . - 0 ID=cds-WP_000710949.1;Parent=gene-AC57_RS15865;Dbxref=GenBank:WP_000710949.1;Name=WP_000710949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310269.1;locus_tag=AC57_RS15865;product=phage tail assembly chaperone;protein_id=WP_000710949.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 17784 18500 . - . ID=gene-AC57_RS15860;Name=AC57_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15860;old_locus_tag=AC57_1606 NZ_JJLR01000061.1 Protein Homology CDS 17784 18500 . - 0 ID=cds-WP_001275441.1;Parent=gene-AC57_RS15860;Dbxref=GenBank:WP_001275441.1;Name=WP_001275441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310270.1;locus_tag=AC57_RS15860;product=major tail subunit;protein_id=WP_001275441.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 18567 18911 . - . ID=gene-AC57_RS15855;Name=gp17;gbkey=Gene;gene=gp17;gene_biotype=protein_coding;locus_tag=AC57_RS15855;old_locus_tag=AC57_1607 NZ_JJLR01000061.1 Protein Homology CDS 18567 18911 . - 0 ID=cds-WP_000133388.1;Parent=gene-AC57_RS15855;Dbxref=GenBank:WP_000133388.1;Name=WP_000133388.1;gbkey=CDS;gene=gp17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309575.1;locus_tag=AC57_RS15855;product=tail completion protein gp17;protein_id=WP_000133388.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 18908 19354 . - . ID=gene-AC57_RS15850;Name=AC57_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15850;old_locus_tag=AC57_1608 NZ_JJLR01000061.1 Protein Homology CDS 18908 19354 . - 0 ID=cds-WP_032279873.1;Parent=gene-AC57_RS15850;Dbxref=GenBank:WP_032279873.1;Name=WP_032279873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309825.1;locus_tag=AC57_RS15850;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_032279873.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 19351 19701 . - . ID=gene-AC57_RS15845;Name=AC57_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15845;old_locus_tag=AC57_1609 NZ_JJLR01000061.1 Protein Homology CDS 19351 19701 . - 0 ID=cds-WP_001007905.1;Parent=gene-AC57_RS15845;Dbxref=GenBank:WP_001007905.1;Name=WP_001007905.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309824.1;locus_tag=AC57_RS15845;product=phage head closure protein;protein_id=WP_001007905.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 19711 20037 . - . ID=gene-AC57_RS15840;Name=AC57_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15840;old_locus_tag=AC57_1610 NZ_JJLR01000061.1 Protein Homology CDS 19711 20037 . - 0 ID=cds-WP_000125990.1;Parent=gene-AC57_RS15840;Dbxref=GenBank:WP_000125990.1;Name=WP_000125990.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309823.1;locus_tag=AC57_RS15840;product=head-tail connector protein;protein_id=WP_000125990.1;transl_table=11 NZ_JJLR01000061.1 RefSeq pseudogene 20034 22780 . - . ID=gene-AC57_RS26985;Name=AC57_RS26985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26985;pseudo=true NZ_JJLR01000061.1 Protein Homology CDS 20034 22780 . - 0 ID=cds-AC57_RS26985;Parent=gene-AC57_RS26985;Note=frameshifted;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309822.1;locus_tag=AC57_RS26985;product=phage portal protein;pseudo=true;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 22726 22947 . - . ID=gene-AC57_RS15825;Name=AC57_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15825;old_locus_tag=AC57_1613 NZ_JJLR01000061.1 Protein Homology CDS 22726 22947 . - 0 ID=cds-WP_001063099.1;Parent=gene-AC57_RS15825;Dbxref=GenBank:WP_001063099.1;Name=WP_001063099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502610.1;locus_tag=AC57_RS15825;product=hypothetical protein;protein_id=WP_001063099.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 22992 24929 . - . ID=gene-AC57_RS15820;Name=AC57_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15820;old_locus_tag=AC57_1614 NZ_JJLR01000061.1 Protein Homology CDS 22992 24929 . - 0 ID=cds-WP_000173031.1;Parent=gene-AC57_RS15820;Dbxref=GenBank:WP_000173031.1;Name=WP_000173031.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309570.1;locus_tag=AC57_RS15820;product=phage major capsid protein;protein_id=WP_000173031.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 24993 26654 . - . ID=gene-AC57_RS15815;Name=AC57_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15815;old_locus_tag=AC57_1615 NZ_JJLR01000061.1 Protein Homology CDS 24993 26654 . - 0 ID=cds-WP_001299337.1;Parent=gene-AC57_RS15815;Dbxref=GenBank:WP_001299337.1;Name=WP_001299337.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309569.1;locus_tag=AC57_RS15815;product=terminase large subunit;protein_id=WP_001299337.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 26651 27214 . - . ID=gene-AC57_RS15810;Name=AC57_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15810;old_locus_tag=AC57_1616 NZ_JJLR01000061.1 Protein Homology CDS 26651 27214 . - 0 ID=cds-WP_000958366.1;Parent=gene-AC57_RS15810;Dbxref=GenBank:WP_000958366.1;Name=WP_000958366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309568.1;locus_tag=AC57_RS15810;product=terminase small subunit;protein_id=WP_000958366.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 27505 27870 . - . ID=gene-AC57_RS0123910;Name=AC57_RS0123910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123910 NZ_JJLR01000061.1 Protein Homology CDS 27505 27870 . - 0 ID=cds-WP_032279871.1;Parent=gene-AC57_RS0123910;Dbxref=GenBank:WP_032279871.1;Name=WP_032279871.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309567.1;locus_tag=AC57_RS0123910;product=HNH endonuclease;protein_id=WP_032279871.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 27912 28112 . + . ID=gene-AC57_RS15805;Name=AC57_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15805;old_locus_tag=AC57_1617 NZ_JJLR01000061.1 Protein Homology CDS 27912 28112 . + 0 ID=cds-WP_000095741.1;Parent=gene-AC57_RS15805;Dbxref=GenBank:WP_000095741.1;Name=WP_000095741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AC57_RS15805;product=YlcI/YnfO family protein;protein_id=WP_000095741.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 28311 28535 . - . ID=gene-AC57_RS15800;Name=AC57_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15800;old_locus_tag=AC57_1618 NZ_JJLR01000061.1 Protein Homology CDS 28311 28535 . - 0 ID=cds-WP_000736383.1;Parent=gene-AC57_RS15800;Dbxref=GenBank:WP_000736383.1;Name=WP_000736383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309563.1;locus_tag=AC57_RS15800;product=hypothetical protein;protein_id=WP_000736383.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 28532 29026 . - . ID=gene-AC57_RS31215;Name=AC57_RS31215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31215;old_locus_tag=AC57_1619 NZ_JJLR01000061.1 Protein Homology CDS 28532 29026 . - 0 ID=cds-WP_032279870.1;Parent=gene-AC57_RS31215;Dbxref=GenBank:WP_032279870.1;Name=WP_032279870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530006.1;locus_tag=AC57_RS31215;product=lysis protein;protein_id=WP_032279870.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 29028 29114 . - . ID=gene-AC57_RS0123920;Name=AC57_RS0123920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123920 NZ_JJLR01000061.1 Protein Homology CDS 29028 29114 . - 0 ID=cds-WP_032140280.1;Parent=gene-AC57_RS0123920;Dbxref=GenBank:WP_032140280.1;Name=WP_032140280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AC57_RS0123920;product=hypothetical protein;protein_id=WP_032140280.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 29126 29281 . - . ID=gene-AC57_RS30670;Name=AC57_RS30670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30670;old_locus_tag=AC57_1620 NZ_JJLR01000061.1 Protein Homology CDS 29126 29281 . - 0 ID=cds-WP_042004856.1;Parent=gene-AC57_RS30670;Dbxref=GenBank:WP_042004856.1;Name=WP_042004856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000788411.1;locus_tag=AC57_RS30670;product=hypothetical protein;protein_id=WP_042004856.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 29245 29376 . - . ID=gene-AC57_RS30990;Name=AC57_RS30990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30990;old_locus_tag=AC57_1621 NZ_JJLR01000061.1 Protein Homology CDS 29245 29376 . - 0 ID=cds-WP_001280933.1;Parent=gene-AC57_RS30990;Dbxref=GenBank:WP_001280933.1;Name=WP_001280933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280968.1;locus_tag=AC57_RS30990;product=hypothetical protein;protein_id=WP_001280933.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 29669 30202 . - . ID=gene-AC57_RS15780;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AC57_RS15780;old_locus_tag=AC57_1622 NZ_JJLR01000061.1 Protein Homology CDS 29669 30202 . - 0 ID=cds-WP_001092855.1;Parent=gene-AC57_RS15780;Dbxref=GenBank:WP_001092855.1;Name=WP_001092855.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309123.1;locus_tag=AC57_RS15780;product=lysozyme;protein_id=WP_001092855.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 30266 30616 . - . ID=gene-AC57_RS15775;Name=AC57_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15775;old_locus_tag=AC57_1623 NZ_JJLR01000061.1 Protein Homology CDS 30266 30616 . - 0 ID=cds-WP_000193290.1;Parent=gene-AC57_RS15775;Dbxref=GenBank:WP_000193290.1;Name=WP_000193290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193290.1;locus_tag=AC57_RS15775;product=YdfR family protein;protein_id=WP_000193290.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 30621 30836 . - . ID=gene-AC57_RS15770;Name=AC57_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15770;old_locus_tag=AC57_1624 NZ_JJLR01000061.1 Protein Homology CDS 30621 30836 . - 0 ID=cds-WP_000284510.1;Parent=gene-AC57_RS15770;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AC57_RS15770;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 30987 32843 . - . ID=gene-AC57_RS15765;Name=AC57_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15765;old_locus_tag=AC57_1625 NZ_JJLR01000061.1 Protein Homology CDS 30987 32843 . - 0 ID=cds-WP_000874316.1;Parent=gene-AC57_RS15765;Dbxref=GenBank:WP_000874316.1;Name=WP_000874316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309808.1;locus_tag=AC57_RS15765;product=SASA family carbohydrate esterase;protein_id=WP_000874316.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 33104 33439 . + . ID=gene-AC57_RS0123930;Name=AC57_RS0123930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123930 NZ_JJLR01000061.1 Protein Homology CDS 33104 33439 . + 0 ID=cds-WP_000871291.1;Parent=gene-AC57_RS0123930;Dbxref=GenBank:WP_000871291.1;Name=WP_000871291.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707425.1;locus_tag=AC57_RS0123930;product=anti-adapter protein IraM;protein_id=WP_000871291.1;transl_table=11 NZ_JJLR01000061.1 RefSeq pseudogene 33510 33635 . + . ID=gene-AC57_RS30675;Name=AC57_RS30675;end_range=33635,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30675;partial=true;pseudo=true NZ_JJLR01000061.1 Protein Homology CDS 33510 33635 . + 0 ID=cds-AC57_RS30675;Parent=gene-AC57_RS30675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=33635,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311526.1;locus_tag=AC57_RS30675;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 33720 33851 . - . ID=gene-AC57_RS29765;Name=AC57_RS29765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29765;old_locus_tag=AC57_1627 NZ_JJLR01000061.1 Protein Homology CDS 33720 33851 . - 0 ID=cds-WP_001438304.1;Parent=gene-AC57_RS29765;Dbxref=GenBank:WP_001438304.1;Name=WP_001438304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216624.1;locus_tag=AC57_RS29765;product=DUF3927 family protein;protein_id=WP_001438304.1;transl_table=11 NZ_JJLR01000061.1 RefSeq gene 34351 34427 . - . ID=gene-AC57_RS15755;Name=AC57_RS15755;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS15755;old_locus_tag=AC57_1628 NZ_JJLR01000061.1 tRNAscan-SE tRNA 34351 34427 . - . ID=rna-AC57_RS15755;Parent=gene-AC57_RS15755;anticodon=(pos:complement(34391..34393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS15755;product=tRNA-Arg NZ_JJLR01000061.1 tRNAscan-SE exon 34351 34427 . - . ID=exon-AC57_RS15755-1;Parent=rna-AC57_RS15755;anticodon=(pos:complement(34391..34393));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS15755;product=tRNA-Arg NZ_JJLR01000061.1 RefSeq gene 34636 34744 . - . ID=gene-AC57_RS30680;Name=AC57_RS30680;end_range=34744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30680;partial=true NZ_JJLR01000061.1 Protein Homology CDS 34636 34744 . - 1 ID=cds-WP_024202182.1;Parent=gene-AC57_RS30680;Dbxref=GenBank:WP_024202182.1;Name=WP_024202182.1;end_range=34744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30680;partial=true;product=hypothetical protein;protein_id=WP_024202182.1;transl_table=11 ##sequence-region NZ_JJLR01000062.1 1 30310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000062.1 RefSeq region 1 30310 . + . ID=NZ_JJLR01000062.1:1..30310;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000062.1 RefSeq gene 1 2151 . - . ID=gene-AC57_RS15750;Name=AC57_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15750;old_locus_tag=AC57_1629;partial=true;start_range=.,1 NZ_JJLR01000062.1 Protein Homology CDS 1 2151 . - 0 ID=cds-WP_032285683.1;Parent=gene-AC57_RS15750;Dbxref=GenBank:WP_032285683.1;Name=WP_032285683.1;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=AC57_RS15750;partial=true;product=host specificity protein J;protein_id=WP_032285683.1;start_range=.,1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 2212 2784 . - . ID=gene-AC57_RS15745;Name=AC57_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15745;old_locus_tag=AC57_1630 NZ_JJLR01000062.1 Protein Homology CDS 2212 2784 . - 0 ID=cds-WP_000847680.1;Parent=gene-AC57_RS15745;Dbxref=GenBank:WP_000847680.1;Name=WP_000847680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309674.2;locus_tag=AC57_RS15745;product=tail assembly protein;protein_id=WP_000847680.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 2781 3524 . - . ID=gene-AC57_RS15740;Name=AC57_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15740;old_locus_tag=AC57_1631 NZ_JJLR01000062.1 Protein Homology CDS 2781 3524 . - 0 ID=cds-WP_000140696.1;Parent=gene-AC57_RS15740;Dbxref=GenBank:WP_000140696.1;Name=WP_000140696.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309673.1;locus_tag=AC57_RS15740;product=C40 family peptidase;protein_id=WP_000140696.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 3530 4228 . - . ID=gene-AC57_RS15735;Name=AC57_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15735;old_locus_tag=AC57_1632 NZ_JJLR01000062.1 Protein Homology CDS 3530 4228 . - 0 ID=cds-WP_001152432.1;Parent=gene-AC57_RS15735;Dbxref=GenBank:WP_001152432.1;Name=WP_001152432.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309672.1;locus_tag=AC57_RS15735;product=phage minor tail protein L;protein_id=WP_001152432.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 4228 4566 . - . ID=gene-AC57_RS15730;Name=AC57_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15730;old_locus_tag=AC57_1633 NZ_JJLR01000062.1 Protein Homology CDS 4228 4566 . - 0 ID=cds-WP_000024051.1;Parent=gene-AC57_RS15730;Dbxref=GenBank:WP_000024051.1;Name=WP_000024051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000024053.1;locus_tag=AC57_RS15730;product=phage tail protein;protein_id=WP_000024051.1;transl_table=11 NZ_JJLR01000062.1 RefSeq pseudogene 4559 7792 . - . ID=gene-AC57_RS0123940;Name=AC57_RS0123940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0123940;old_locus_tag=AC57_1634;pseudo=true NZ_JJLR01000062.1 Protein Homology CDS 4559 7792 . - 0 ID=cds-AC57_RS0123940;Parent=gene-AC57_RS0123940;Note=internal stop;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231723.1;locus_tag=AC57_RS0123940;product=phage tail tape measure protein;pseudo=true;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 7956 8156 . - . ID=gene-AC57_RS0123945;Name=AC57_RS0123945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123945;old_locus_tag=AC57_1636 NZ_JJLR01000062.1 Protein Homology CDS 7956 8156 . - 0 ID=cds-WP_032139919.1;Parent=gene-AC57_RS0123945;Dbxref=GenBank:WP_032139919.1;Name=WP_032139919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564323.1;locus_tag=AC57_RS0123945;product=hypothetical protein;protein_id=WP_032139919.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 8264 8623 . - . ID=gene-AC57_RS15725;Name=ydaY;gbkey=Gene;gene=ydaY;gene_biotype=protein_coding;locus_tag=AC57_RS15725;old_locus_tag=AC57_1637 NZ_JJLR01000062.1 Protein Homology CDS 8264 8623 . - 0 ID=cds-WP_122452218.1;Parent=gene-AC57_RS15725;Dbxref=GenBank:WP_122452218.1;Name=WP_122452218.1;gbkey=CDS;gene=ydaY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518777.1;locus_tag=AC57_RS15725;product=protein YdaY;protein_id=WP_122452218.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 8774 9736 . - . ID=gene-AC57_RS15720;Name=AC57_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15720;old_locus_tag=AC57_1638 NZ_JJLR01000062.1 Protein Homology CDS 8774 9736 . - 0 ID=cds-WP_001328756.1;Parent=gene-AC57_RS15720;Dbxref=GenBank:WP_001328756.1;Name=WP_001328756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233030.1;locus_tag=AC57_RS15720;product=phage tail tube protein;protein_id=WP_001328756.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 9763 10155 . - . ID=gene-AC57_RS15715;Name=AC57_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15715;old_locus_tag=AC57_1639 NZ_JJLR01000062.1 Protein Homology CDS 9763 10155 . - 0 ID=cds-WP_032237746.1;Parent=gene-AC57_RS15715;Dbxref=GenBank:WP_032237746.1;Name=WP_032237746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121013.1;locus_tag=AC57_RS15715;product=phage tail terminator-like protein;protein_id=WP_032237746.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 10152 10532 . - . ID=gene-AC57_RS15710;Name=AC57_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15710;old_locus_tag=AC57_1640 NZ_JJLR01000062.1 Protein Homology CDS 10152 10532 . - 0 ID=cds-WP_001029819.1;Parent=gene-AC57_RS15710;Dbxref=GenBank:WP_001029819.1;Name=WP_001029819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029817.1;locus_tag=AC57_RS15710;product=hypothetical protein;protein_id=WP_001029819.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 10533 10916 . - . ID=gene-AC57_RS15705;Name=AC57_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15705;old_locus_tag=AC57_1641 NZ_JJLR01000062.1 Protein Homology CDS 10533 10916 . - 0 ID=cds-WP_000524259.1;Parent=gene-AC57_RS15705;Dbxref=GenBank:WP_000524259.1;Name=WP_000524259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231725.1;locus_tag=AC57_RS15705;product=hypothetical protein;protein_id=WP_000524259.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 10916 11311 . - . ID=gene-AC57_RS15700;Name=AC57_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15700;old_locus_tag=AC57_1642 NZ_JJLR01000062.1 Protein Homology CDS 10916 11311 . - 0 ID=cds-WP_000634211.1;Parent=gene-AC57_RS15700;Dbxref=GenBank:WP_000634211.1;Name=WP_000634211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000634213.1;locus_tag=AC57_RS15700;product=hypothetical protein;protein_id=WP_000634211.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 11315 11491 . - . ID=gene-AC57_RS30255;Name=AC57_RS30255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30255;old_locus_tag=AC57_1643 NZ_JJLR01000062.1 Protein Homology CDS 11315 11491 . - 0 ID=cds-WP_000908084.1;Parent=gene-AC57_RS30255;Dbxref=GenBank:WP_000908084.1;Name=WP_000908084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004121546.1;locus_tag=AC57_RS30255;product=hypothetical protein;protein_id=WP_000908084.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 11534 12673 . - . ID=gene-AC57_RS15695;Name=AC57_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15695;old_locus_tag=AC57_1644 NZ_JJLR01000062.1 Protein Homology CDS 11534 12673 . - 0 ID=cds-WP_000918487.1;Parent=gene-AC57_RS15695;Dbxref=GenBank:WP_000918487.1;Name=WP_000918487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000918482.1;locus_tag=AC57_RS15695;product=P22 phage major capsid protein family protein;protein_id=WP_000918487.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 12772 13536 . - . ID=gene-AC57_RS15690;Name=AC57_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15690;old_locus_tag=AC57_1645 NZ_JJLR01000062.1 Protein Homology CDS 12772 13536 . - 0 ID=cds-WP_000770042.1;Parent=gene-AC57_RS15690;Dbxref=GenBank:WP_000770042.1;Name=WP_000770042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000770040.1;locus_tag=AC57_RS15690;product=DUF6651 domain-containing protein;protein_id=WP_000770042.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 13641 14753 . - . ID=gene-AC57_RS15685;Name=AC57_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15685;old_locus_tag=AC57_1646 NZ_JJLR01000062.1 Protein Homology CDS 13641 14753 . - 0 ID=cds-WP_001470067.1;Parent=gene-AC57_RS15685;Dbxref=GenBank:WP_001470067.1;Name=WP_001470067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001645719.1;locus_tag=AC57_RS15685;product=phage minor head protein;protein_id=WP_001470067.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 14737 16143 . - . ID=gene-AC57_RS15680;Name=AC57_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15680;old_locus_tag=AC57_1647 NZ_JJLR01000062.1 Protein Homology CDS 14737 16143 . - 0 ID=cds-WP_000763702.1;Parent=gene-AC57_RS15680;Dbxref=GenBank:WP_000763702.1;Name=WP_000763702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469190.1;locus_tag=AC57_RS15680;product=DUF4055 domain-containing protein;protein_id=WP_000763702.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 16146 17447 . - . ID=gene-AC57_RS15675;Name=AC57_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15675;old_locus_tag=AC57_1648 NZ_JJLR01000062.1 Protein Homology CDS 16146 17447 . - 0 ID=cds-WP_000625348.1;Parent=gene-AC57_RS15675;Dbxref=GenBank:WP_000625348.1;Name=WP_000625348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625349.1;locus_tag=AC57_RS15675;product=terminase large subunit domain-containing protein;protein_id=WP_000625348.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 17428 18522 . - . ID=gene-AC57_RS15670;Name=AC57_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15670;old_locus_tag=AC57_1649 NZ_JJLR01000062.1 Protein Homology CDS 17428 18522 . - 0 ID=cds-WP_000089447.1;Parent=gene-AC57_RS15670;Dbxref=GenBank:WP_000089447.1;Name=WP_000089447.1;Ontology_term=GO:0051276;gbkey=CDS;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000089437.1;locus_tag=AC57_RS15670;product=terminase small subunit;protein_id=WP_000089447.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 18526 18735 . - . ID=gene-AC57_RS15665;Name=AC57_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15665;old_locus_tag=AC57_1650 NZ_JJLR01000062.1 Protein Homology CDS 18526 18735 . - 0 ID=cds-WP_000126788.1;Parent=gene-AC57_RS15665;Dbxref=GenBank:WP_000126788.1;Name=WP_000126788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000126789.1;locus_tag=AC57_RS15665;product=hypothetical protein;protein_id=WP_000126788.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 18713 19645 . - . ID=gene-AC57_RS15660;Name=AC57_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15660;old_locus_tag=AC57_1651 NZ_JJLR01000062.1 Protein Homology CDS 18713 19645 . - 0 ID=cds-WP_001204028.1;Parent=gene-AC57_RS15660;Dbxref=GenBank:WP_001204028.1;Name=WP_001204028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001204026.1;locus_tag=AC57_RS15660;product=hypothetical protein;protein_id=WP_001204028.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 19638 20429 . - . ID=gene-AC57_RS30995;Name=AC57_RS30995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30995;old_locus_tag=AC57_1652 NZ_JJLR01000062.1 Protein Homology CDS 19638 20429 . - 0 ID=cds-WP_001291105.1;Parent=gene-AC57_RS30995;Dbxref=GenBank:WP_001291105.1;Name=WP_001291105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415883.1;locus_tag=AC57_RS30995;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_001291105.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 20567 22024 . - . ID=gene-AC57_RS15650;Name=trkG;gbkey=Gene;gene=trkG;gene_biotype=protein_coding;locus_tag=AC57_RS15650;old_locus_tag=AC57_1653 NZ_JJLR01000062.1 Protein Homology CDS 20567 22024 . - 0 ID=cds-WP_032279943.1;Parent=gene-AC57_RS15650;Dbxref=GenBank:WP_032279943.1;Name=WP_032279943.1;gbkey=CDS;gene=trkG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415881.1;locus_tag=AC57_RS15650;product=Trk system potassium transporter TrkG;protein_id=WP_032279943.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 22162 22626 . - . ID=gene-AC57_RS31220;Name=rzpD;gbkey=Gene;gene=rzpD;gene_biotype=protein_coding;locus_tag=AC57_RS31220;old_locus_tag=AC57_1654 NZ_JJLR01000062.1 Protein Homology CDS 22162 22626 . - 0 ID=cds-WP_032237748.1;Parent=gene-AC57_RS31220;Dbxref=GenBank:WP_032237748.1;Name=WP_032237748.1;gbkey=CDS;gene=rzpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001082741.1;locus_tag=AC57_RS31220;product=lysis protein;protein_id=WP_032237748.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 22623 23099 . - . ID=gene-AC57_RS15640;Name=AC57_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15640;old_locus_tag=AC57_1655 NZ_JJLR01000062.1 Protein Homology CDS 22623 23099 . - 0 ID=cds-WP_001194112.1;Parent=gene-AC57_RS15640;Dbxref=GenBank:WP_001194112.1;Name=WP_001194112.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309649.1;locus_tag=AC57_RS15640;product=glycoside hydrolase family 24 protein;protein_id=WP_001194112.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 23103 23438 . - . ID=gene-AC57_RS15635;Name=AC57_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15635;old_locus_tag=AC57_1656 NZ_JJLR01000062.1 Protein Homology CDS 23103 23438 . - 0 ID=cds-WP_001766841.1;Parent=gene-AC57_RS15635;Dbxref=GenBank:WP_001766841.1;Name=WP_001766841.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001120497.1;locus_tag=AC57_RS15635;product=phage holin%2C lambda family;protein_id=WP_001766841.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 23515 24567 . - . ID=gene-AC57_RS15630;Name=AC57_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15630;old_locus_tag=AC57_1657 NZ_JJLR01000062.1 Protein Homology CDS 23515 24567 . - 0 ID=cds-WP_032246417.1;Parent=gene-AC57_RS15630;Dbxref=GenBank:WP_032246417.1;Name=WP_032246417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799668.1;locus_tag=AC57_RS15630;product=DNA-methyltransferase;protein_id=WP_032246417.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 24717 24911 . - . ID=gene-AC57_RS15625;Name=AC57_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15625;old_locus_tag=AC57_1658 NZ_JJLR01000062.1 Protein Homology CDS 24717 24911 . - 0 ID=cds-WP_032192725.1;Parent=gene-AC57_RS15625;Dbxref=GenBank:WP_032192725.1;Name=WP_032192725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001317671.1;locus_tag=AC57_RS15625;product=hypothetical protein;protein_id=WP_032192725.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 25486 26568 . + . ID=gene-AC57_RS15620;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AC57_RS15620;old_locus_tag=AC57_1659 NZ_JJLR01000062.1 Protein Homology CDS 25486 26568 . + 0 ID=cds-WP_000737263.1;Parent=gene-AC57_RS15620;Dbxref=GenBank:WP_000737263.1;Name=WP_000737263.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707819.1;locus_tag=AC57_RS15620;product=porin OmpC;protein_id=WP_000737263.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 26757 27140 . - . ID=gene-AC57_RS15615;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=protein_coding;locus_tag=AC57_RS15615;old_locus_tag=AC57_1660 NZ_JJLR01000062.1 Protein Homology CDS 26757 27140 . - 0 ID=cds-WP_001204774.1;Parent=gene-AC57_RS15615;Dbxref=GenBank:WP_001204774.1;Name=WP_001204774.1;gbkey=CDS;gene=quuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415083.1;locus_tag=AC57_RS15615;product=antitermination protein QuuD;protein_id=WP_001204774.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 27226 27366 . - . ID=gene-AC57_RS15610;Name=AC57_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15610;old_locus_tag=AC57_1661 NZ_JJLR01000062.1 Protein Homology CDS 27226 27366 . - 0 ID=cds-WP_032145910.1;Parent=gene-AC57_RS15610;Dbxref=GenBank:WP_032145910.1;Name=WP_032145910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588439.1;locus_tag=AC57_RS15610;product=YlcG family protein;protein_id=WP_032145910.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 27363 27725 . - . ID=gene-AC57_RS15605;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=AC57_RS15605;old_locus_tag=AC57_1662 NZ_JJLR01000062.1 Protein Homology CDS 27363 27725 . - 0 ID=cds-WP_001099516.1;Parent=gene-AC57_RS15605;Dbxref=GenBank:WP_001099516.1;Name=WP_001099516.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309646.1;locus_tag=AC57_RS15605;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_001099516.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 27722 28012 . - . ID=gene-AC57_RS15600;Name=ybcO;gbkey=Gene;gene=ybcO;gene_biotype=protein_coding;locus_tag=AC57_RS15600;old_locus_tag=AC57_1663 NZ_JJLR01000062.1 Protein Homology CDS 27722 28012 . - 0 ID=cds-WP_000774504.1;Parent=gene-AC57_RS15600;Dbxref=GenBank:WP_000774504.1;Name=WP_000774504.1;gbkey=CDS;gene=ybcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309645.1;locus_tag=AC57_RS15600;product=DUF1364 domain-containing protein;protein_id=WP_000774504.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 28005 28175 . - . ID=gene-AC57_RS15595;Name=ninE;gbkey=Gene;gene=ninE;gene_biotype=protein_coding;locus_tag=AC57_RS15595;old_locus_tag=AC57_1664 NZ_JJLR01000062.1 Protein Homology CDS 28005 28175 . - 0 ID=cds-WP_000224912.1;Parent=gene-AC57_RS15595;Dbxref=GenBank:WP_000224912.1;Name=WP_000224912.1;gbkey=CDS;gene=ninE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309644.1;locus_tag=AC57_RS15595;product=NinE family protein;protein_id=WP_000224912.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 28175 28630 . - . ID=gene-AC57_RS15590;Name=ybcN;gbkey=Gene;gene=ybcN;gene_biotype=protein_coding;locus_tag=AC57_RS15590;old_locus_tag=AC57_1665 NZ_JJLR01000062.1 Protein Homology CDS 28175 28630 . - 0 ID=cds-WP_001053034.1;Parent=gene-AC57_RS15590;Dbxref=GenBank:WP_001053034.1;Name=WP_001053034.1;gbkey=CDS;gene=ybcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415079.1;locus_tag=AC57_RS15590;product=DNA base-flipping protein YbcN;protein_id=WP_001053034.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 28627 28728 . - . ID=gene-AC57_RS28920;Name=AC57_RS28920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28920 NZ_JJLR01000062.1 Protein Homology CDS 28627 28728 . - 0 ID=cds-WP_072130332.1;Parent=gene-AC57_RS28920;Dbxref=GenBank:WP_072130332.1;Name=WP_072130332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165308.1;locus_tag=AC57_RS28920;product=hypothetical protein;protein_id=WP_072130332.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 28818 29174 . - . ID=gene-AC57_RS0123950;Name=AC57_RS0123950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123950 NZ_JJLR01000062.1 Protein Homology CDS 28818 29174 . - 0 ID=cds-WP_000379700.1;Parent=gene-AC57_RS0123950;Dbxref=GenBank:WP_000379700.1;Name=WP_000379700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379700.1;locus_tag=AC57_RS0123950;product=hypothetical protein;protein_id=WP_000379700.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 29636 29959 . - . ID=gene-AC57_RS0123955;Name=AC57_RS0123955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123955;old_locus_tag=AC57_1666 NZ_JJLR01000062.1 Protein Homology CDS 29636 29959 . - 0 ID=cds-WP_001351655.1;Parent=gene-AC57_RS0123955;Dbxref=GenBank:WP_001351655.1;Name=WP_001351655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000338660.1;locus_tag=AC57_RS0123955;product=P22AR C-terminal domain-containing protein;protein_id=WP_001351655.1;transl_table=11 NZ_JJLR01000062.1 RefSeq gene 30054 30310 . - . ID=gene-AC57_RS15585;Name=AC57_RS15585;end_range=30310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15585;old_locus_tag=AC57_1667;partial=true NZ_JJLR01000062.1 Protein Homology CDS 30054 30310 . - 2 ID=cds-WP_000363925.1-4;Parent=gene-AC57_RS15585;Dbxref=GenBank:WP_000363925.1;Name=WP_000363925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=30310,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS15585;partial=true;product=IS1 family transposase;protein_id=WP_000363925.1;transl_table=11 ##sequence-region NZ_JJLR01000063.1 1 6518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000063.1 RefSeq region 1 6518 . + . ID=NZ_JJLR01000063.1:1..6518;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000063.1 RefSeq pseudogene 1 331 . + . ID=gene-AC57_RS15580;Name=AC57_RS15580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS15580;old_locus_tag=AC57_1668;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000063.1 Protein Homology CDS 1 331 . + 1 ID=cds-AC57_RS15580;Parent=gene-AC57_RS15580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS15580;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000063.1 RefSeq pseudogene 661 996 . - . ID=gene-AC57_RS30690;Name=AC57_RS30690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30690;partial=true;pseudo=true;start_range=.,661 NZ_JJLR01000063.1 Protein Homology CDS 661 996 . - 0 ID=cds-AC57_RS30690;Parent=gene-AC57_RS30690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193290.1;locus_tag=AC57_RS30690;partial=true;product=YdfR family protein;pseudo=true;start_range=.,661;transl_table=11 NZ_JJLR01000063.1 RefSeq gene 1001 1216 . - . ID=gene-AC57_RS15575;Name=AC57_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15575;old_locus_tag=AC57_1670 NZ_JJLR01000063.1 Protein Homology CDS 1001 1216 . - 0 ID=cds-WP_000839588.1;Parent=gene-AC57_RS15575;Dbxref=GenBank:WP_000839588.1;Name=WP_000839588.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415086.1;locus_tag=AC57_RS15575;product=class II holin family protein;protein_id=WP_000839588.1;transl_table=11 NZ_JJLR01000063.1 RefSeq gene 1407 2120 . - . ID=gene-AC57_RS0123965;Name=AC57_RS0123965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123965 NZ_JJLR01000063.1 Protein Homology CDS 1407 2120 . - 0 ID=cds-WP_001146313.1;Parent=gene-AC57_RS0123965;Dbxref=GenBank:WP_001146313.1;Name=WP_001146313.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843086.1;locus_tag=AC57_RS0123965;product=helix-turn-helix domain-containing protein;protein_id=WP_001146313.1;transl_table=11 NZ_JJLR01000063.1 RefSeq gene 2527 3486 . - . ID=gene-AC57_RS15570;Name=AC57_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15570;old_locus_tag=AC57_1672 NZ_JJLR01000063.1 Protein Homology CDS 2527 3486 . - 0 ID=cds-WP_000592549.1;Parent=gene-AC57_RS15570;Dbxref=GenBank:WP_000592549.1;Name=WP_000592549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242627.1;locus_tag=AC57_RS15570;product=YbgA family protein;protein_id=WP_000592549.1;transl_table=11 NZ_JJLR01000063.1 RefSeq gene 3679 4203 . + . ID=gene-AC57_RS15565;Name=AC57_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15565;old_locus_tag=AC57_1673 NZ_JJLR01000063.1 Protein Homology CDS 3679 4203 . + 0 ID=cds-WP_000780584.1;Parent=gene-AC57_RS15565;Dbxref=GenBank:WP_000780584.1;Name=WP_000780584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587087.1;locus_tag=AC57_RS15565;product=lipocalin family protein;protein_id=WP_000780584.1;transl_table=11 NZ_JJLR01000063.1 RefSeq gene 4294 4728 . + . ID=gene-AC57_RS15560;Name=AC57_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15560;old_locus_tag=AC57_1674 NZ_JJLR01000063.1 Protein Homology CDS 4294 4728 . + 0 ID=cds-WP_001309734.1;Parent=gene-AC57_RS15560;Dbxref=GenBank:WP_001309734.1;Name=WP_001309734.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS15560;product=transposase;protein_id=WP_001309734.1;transl_table=11 NZ_JJLR01000063.1 RefSeq gene 4725 5075 . + . ID=gene-AC57_RS15555;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS15555;old_locus_tag=AC57_1675 NZ_JJLR01000063.1 Protein Homology CDS 4725 5075 . + 0 ID=cds-WP_032285684.1;Parent=gene-AC57_RS15555;Dbxref=GenBank:WP_032285684.1;Name=WP_032285684.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS15555;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032285684.1;transl_table=11 NZ_JJLR01000063.1 RefSeq gene 5106 6518 . + . ID=gene-AC57_RS15550;Name=AC57_RS15550;end_range=6518,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15550;old_locus_tag=AC57_1676;partial=true NZ_JJLR01000063.1 Protein Homology CDS 5106 6518 . + 0 ID=cds-WP_032285685.1;Parent=gene-AC57_RS15550;Dbxref=GenBank:WP_032285685.1;Name=WP_032285685.1;Ontology_term=GO:0006313,GO:0004803;end_range=6518,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS15550;partial=true;product=IS66-like element ISEc43 family transposase;protein_id=WP_032285685.1;transl_table=11 ##sequence-region NZ_JJLR01000064.1 1 1328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000064.1 RefSeq region 1 1328 . + . ID=NZ_JJLR01000064.1:1..1328;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000064.1 RefSeq gene 1 220 . - . ID=gene-AC57_RS0123970;Name=AC57_RS0123970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123970;old_locus_tag=AC57_1677;partial=true;start_range=.,1 NZ_JJLR01000064.1 Protein Homology CDS 1 220 . - 0 ID=cds-WP_001397283.1;Parent=gene-AC57_RS0123970;Dbxref=GenBank:WP_001397283.1;Name=WP_001397283.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0123970;partial=true;product=IS1 family transposase;protein_id=WP_001397283.1;start_range=.,1;transl_table=11 NZ_JJLR01000064.1 RefSeq pseudogene 274 369 . - . ID=gene-AC57_RS27005;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=pseudogene;locus_tag=AC57_RS27005;old_locus_tag=AC57_1678;partial=true;pseudo=true;start_range=.,274 NZ_JJLR01000064.1 Protein Homology CDS 274 369 . - 0 ID=cds-AC57_RS27005;Parent=gene-AC57_RS27005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=quuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415083.1;locus_tag=AC57_RS27005;partial=true;product=antitermination protein QuuD;pseudo=true;start_range=.,274;transl_table=11 NZ_JJLR01000064.1 RefSeq gene 387 1328 . - . ID=gene-AC57_RS15545;Name=AC57_RS15545;end_range=1328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15545;old_locus_tag=AC57_1679;partial=true NZ_JJLR01000064.1 Protein Homology CDS 387 1328 . - 0 ID=cds-WP_050440072.1;Parent=gene-AC57_RS15545;Dbxref=GenBank:WP_050440072.1;Name=WP_050440072.1;end_range=1328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416078.4;locus_tag=AC57_RS15545;partial=true;product=DUF968 domain-containing protein;protein_id=WP_050440072.1;transl_table=11 ##sequence-region NZ_JJLR01000065.1 1 491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000065.1 RefSeq region 1 491 . + . ID=NZ_JJLR01000065.1:1..491;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000065.1 RefSeq pseudogene 1 491 . - . ID=gene-AC57_RS15540;Name=AC57_RS15540;end_range=491,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS15540;old_locus_tag=AC57_1680;partial=true;pseudo=true NZ_JJLR01000065.1 Protein Homology CDS 1 491 . - 0 ID=cds-AC57_RS15540;Parent=gene-AC57_RS15540;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;end_range=491,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS15540;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000066.1 1 117732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000066.1 RefSeq region 1 117732 . + . ID=NZ_JJLR01000066.1:1..117732;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000066.1 RefSeq gene 1 317 . - . ID=gene-AC57_RS15535;Name=AC57_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15535;old_locus_tag=AC57_1681;partial=true;start_range=.,1 NZ_JJLR01000066.1 Protein Homology CDS 1 317 . - 0 ID=cds-WP_032285691.1;Parent=gene-AC57_RS15535;Dbxref=GenBank:WP_032285691.1;Name=WP_032285691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707428.1;locus_tag=AC57_RS15535;partial=true;product=hypothetical protein;protein_id=WP_032285691.1;start_range=.,1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 319 597 . - . ID=gene-AC57_RS0123975;Name=AC57_RS0123975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0123975 NZ_JJLR01000066.1 Protein Homology CDS 319 597 . - 0 ID=cds-WP_023147795.1;Parent=gene-AC57_RS0123975;Dbxref=GenBank:WP_023147795.1;Name=WP_023147795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707878.1;locus_tag=AC57_RS0123975;product=hypothetical protein;protein_id=WP_023147795.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 664 915 . - . ID=gene-AC57_RS15530;Name=rem;gbkey=Gene;gene=rem;gene_biotype=protein_coding;locus_tag=AC57_RS15530;old_locus_tag=AC57_1682 NZ_JJLR01000066.1 Protein Homology CDS 664 915 . - 0 ID=cds-WP_000980999.1;Parent=gene-AC57_RS15530;Dbxref=GenBank:WP_000980999.1;Name=WP_000980999.1;gbkey=CDS;gene=rem;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416079.1;locus_tag=AC57_RS15530;product=protein Rem;protein_id=WP_000980999.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 1132 1287 . - . ID=gene-AC57_RS0123980;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AC57_RS0123980 NZ_JJLR01000066.1 Protein Homology CDS 1132 1287 . - 0 ID=cds-WP_000813254.1;Parent=gene-AC57_RS0123980;Dbxref=GenBank:WP_000813254.1;Name=WP_000813254.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AC57_RS0123980;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813254.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 1947 4343 . - . ID=gene-AC57_RS15525;Name=AC57_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15525;old_locus_tag=AC57_1684 NZ_JJLR01000066.1 Protein Homology CDS 1947 4343 . - 0 ID=cds-WP_032280029.1;Parent=gene-AC57_RS15525;Dbxref=GenBank:WP_032280029.1;Name=WP_032280029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785798.1;locus_tag=AC57_RS15525;product=AAA family ATPase;protein_id=WP_032280029.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 4439 4867 . - . ID=gene-AC57_RS15520;Name=AC57_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15520;old_locus_tag=AC57_1685 NZ_JJLR01000066.1 Protein Homology CDS 4439 4867 . - 0 ID=cds-WP_032246506.1;Parent=gene-AC57_RS15520;Dbxref=GenBank:WP_032246506.1;Name=WP_032246506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232644.1;locus_tag=AC57_RS15520;product=DUF977 family protein;protein_id=WP_032246506.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 4908 5873 . - . ID=gene-AC57_RS15515;Name=AC57_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15515;old_locus_tag=AC57_1686 NZ_JJLR01000066.1 Protein Homology CDS 4908 5873 . - 0 ID=cds-WP_032237984.1;Parent=gene-AC57_RS15515;Dbxref=GenBank:WP_032237984.1;Name=WP_032237984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373617.1;locus_tag=AC57_RS15515;product=phage O protein family;protein_id=WP_032237984.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 5854 6375 . - . ID=gene-AC57_RS15510;Name=AC57_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15510;old_locus_tag=AC57_1687 NZ_JJLR01000066.1 Protein Homology CDS 5854 6375 . - 0 ID=cds-WP_000705359.1;Parent=gene-AC57_RS15510;Dbxref=GenBank:WP_000705359.1;Name=WP_000705359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578395.1;locus_tag=AC57_RS15510;product=toxin YdaT family protein;protein_id=WP_000705359.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 6359 6589 . - . ID=gene-AC57_RS0123990;Name=dicC;gbkey=Gene;gene=dicC;gene_biotype=protein_coding;locus_tag=AC57_RS0123990 NZ_JJLR01000066.1 Protein Homology CDS 6359 6589 . - 0 ID=cds-WP_000920568.1;Parent=gene-AC57_RS0123990;Dbxref=GenBank:WP_000920568.1;Name=WP_000920568.1;gbkey=CDS;gene=dicC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416087.1;locus_tag=AC57_RS0123990;product=dicB transcriptional regulator DicC;protein_id=WP_000920568.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 6673 7080 . + . ID=gene-AC57_RS0123995;Name=dicA;gbkey=Gene;gene=dicA;gene_biotype=protein_coding;locus_tag=AC57_RS0123995 NZ_JJLR01000066.1 Protein Homology CDS 6673 7080 . + 0 ID=cds-WP_000379970.1;Parent=gene-AC57_RS0123995;Dbxref=GenBank:WP_000379970.1;Name=WP_000379970.1;gbkey=CDS;gene=dicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416088.1;locus_tag=AC57_RS0123995;product=DNA-binding transcriptional dual regulator DicA;protein_id=WP_000379970.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 7247 7402 . + . ID=gene-AC57_RS15505;Name=ydfA;gbkey=Gene;gene=ydfA;gene_biotype=protein_coding;locus_tag=AC57_RS15505;old_locus_tag=AC57_1688 NZ_JJLR01000066.1 Protein Homology CDS 7247 7402 . + 0 ID=cds-WP_000379589.1;Parent=gene-AC57_RS15505;Dbxref=GenBank:WP_000379589.1;Name=WP_000379589.1;gbkey=CDS;gene=ydfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309092.1;locus_tag=AC57_RS15505;product=DUF1391 family protein;protein_id=WP_000379589.1;transl_table=11 NZ_JJLR01000066.1 RefSeq pseudogene 7404 7505 . + . ID=gene-AC57_RS31000;Name=ydfB;end_range=7505,.;gbkey=Gene;gene=ydfB;gene_biotype=pseudogene;locus_tag=AC57_RS31000;partial=true;pseudo=true NZ_JJLR01000066.1 Protein Homology CDS 7404 7505 . + 0 ID=cds-AC57_RS31000;Parent=gene-AC57_RS31000;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7505,.;gbkey=CDS;gene=ydfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344964.1;locus_tag=AC57_RS31000;partial=true;product=protein YdfB;pseudo=true;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 8466 8654 . + . ID=gene-AC57_RS15500;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AC57_RS15500;old_locus_tag=AC57_1690 NZ_JJLR01000066.1 Protein Homology CDS 8466 8654 . + 0 ID=cds-WP_000854559.1;Parent=gene-AC57_RS15500;Dbxref=GenBank:WP_000854559.1;Name=WP_000854559.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416092.1;locus_tag=AC57_RS15500;product=cell division inhibition protein DicB;protein_id=WP_000854559.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 8651 8842 . + . ID=gene-AC57_RS15495;Name=ydfD;gbkey=Gene;gene=ydfD;gene_biotype=protein_coding;locus_tag=AC57_RS15495;old_locus_tag=AC57_1691 NZ_JJLR01000066.1 Protein Homology CDS 8651 8842 . + 0 ID=cds-WP_001083273.1;Parent=gene-AC57_RS15495;Dbxref=GenBank:WP_001083273.1;Name=WP_001083273.1;gbkey=CDS;gene=ydfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416093.1;locus_tag=AC57_RS15495;product=lysis protein YdfD;protein_id=WP_001083273.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 8936 11407 . + . ID=gene-AC57_RS15490;Name=AC57_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15490;old_locus_tag=AC57_1692 NZ_JJLR01000066.1 Protein Homology CDS 8936 11407 . + 0 ID=cds-WP_032285688.1;Parent=gene-AC57_RS15490;Dbxref=GenBank:WP_032285688.1;Name=WP_032285688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310313.1;locus_tag=AC57_RS15490;product=exonuclease;protein_id=WP_032285688.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 11480 11731 . + . ID=gene-AC57_RS15485;Name=AC57_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15485;old_locus_tag=AC57_1693 NZ_JJLR01000066.1 Protein Homology CDS 11480 11731 . + 0 ID=cds-WP_000005552.1;Parent=gene-AC57_RS15485;Dbxref=GenBank:WP_000005552.1;Name=WP_000005552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005552.1;locus_tag=AC57_RS15485;product=excisionase family protein;protein_id=WP_000005552.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 11766 13046 . + . ID=gene-AC57_RS15480;Name=AC57_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS15480;old_locus_tag=AC57_1694 NZ_JJLR01000066.1 Protein Homology CDS 11766 13046 . + 0 ID=cds-WP_032279500.1;Parent=gene-AC57_RS15480;Dbxref=GenBank:WP_032279500.1;Name=WP_032279500.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686441.1;locus_tag=AC57_RS15480;product=tyrosine-type recombinase/integrase;protein_id=WP_032279500.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 13234 14253 . - . ID=gene-AC57_RS15475;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=AC57_RS15475;old_locus_tag=AC57_1695 NZ_JJLR01000066.1 Protein Homology CDS 13234 14253 . - 0 ID=cds-WP_000836082.1;Parent=gene-AC57_RS15475;Dbxref=GenBank:WP_000836082.1;Name=WP_000836082.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AC57_RS15475;product=Zn-dependent oxidoreductase;protein_id=WP_000836082.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 14265 15479 . - . ID=gene-AC57_RS15470;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AC57_RS15470;old_locus_tag=AC57_1696 NZ_JJLR01000066.1 Protein Homology CDS 14265 15479 . - 0 ID=cds-WP_001295394.1;Parent=gene-AC57_RS15470;Dbxref=GenBank:WP_001295394.1;Name=WP_001295394.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AC57_RS15470;product=starvation-sensing protein RspA;protein_id=WP_001295394.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 15685 16011 . - . ID=gene-AC57_RS15465;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AC57_RS15465;old_locus_tag=AC57_1697 NZ_JJLR01000066.1 Protein Homology CDS 15685 16011 . - 0 ID=cds-WP_000598292.1;Parent=gene-AC57_RS15465;Dbxref=GenBank:WP_000598292.1;Name=WP_000598292.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416099.1;locus_tag=AC57_RS15465;product=YnfA family protein;protein_id=WP_000598292.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 16146 16487 . + . ID=gene-AC57_RS15460;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AC57_RS15460;old_locus_tag=AC57_1698 NZ_JJLR01000066.1 Protein Homology CDS 16146 16487 . + 0 ID=cds-WP_000705211.1;Parent=gene-AC57_RS15460;Dbxref=GenBank:WP_000705211.1;Name=WP_000705211.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416100.1;locus_tag=AC57_RS15460;product=DUF1283 family protein;protein_id=WP_000705211.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 16522 17082 . + . ID=gene-AC57_RS15455;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AC57_RS15455;old_locus_tag=AC57_1699 NZ_JJLR01000066.1 Protein Homology CDS 16522 17082 . + 0 ID=cds-WP_001138581.1;Parent=gene-AC57_RS15455;Dbxref=GenBank:WP_001138581.1;Name=WP_001138581.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AC57_RS15455;product=spermidine N1-acetyltransferase;protein_id=WP_001138581.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 17085 17795 . - . ID=gene-AC57_RS15450;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AC57_RS15450;old_locus_tag=AC57_1700 NZ_JJLR01000066.1 Protein Homology CDS 17085 17795 . - 0 ID=cds-WP_077756426.1;Parent=gene-AC57_RS15450;Dbxref=GenBank:WP_077756426.1;Name=WP_077756426.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AC57_RS15450;product=YnfC family lipoprotein;protein_id=WP_077756426.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 17903 18208 . + . ID=gene-AC57_RS15445;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AC57_RS15445;old_locus_tag=AC57_1701 NZ_JJLR01000066.1 Protein Homology CDS 17903 18208 . + 0 ID=cds-WP_001307224.1;Parent=gene-AC57_RS15445;Dbxref=GenBank:WP_001307224.1;Name=WP_001307224.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707474.2;locus_tag=AC57_RS15445;product=DUF1161 domain-containing protein;protein_id=WP_001307224.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 18407 20833 . + . ID=gene-AC57_RS15440;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=AC57_RS15440;old_locus_tag=AC57_1702 NZ_JJLR01000066.1 Protein Homology CDS 18407 20833 . + 0 ID=cds-WP_032236878.1;Parent=gene-AC57_RS15440;Dbxref=GenBank:WP_032236878.1;Name=WP_032236878.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AC57_RS15440;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_032236878.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 20894 23317 . + . ID=gene-AC57_RS15435;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AC57_RS15435;old_locus_tag=AC57_1703 NZ_JJLR01000066.1 Protein Homology CDS 20894 23317 . + 0 ID=cds-WP_001340362.1;Parent=gene-AC57_RS15435;Dbxref=GenBank:WP_001340362.1;Name=WP_001340362.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AC57_RS15435;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_001340362.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 23328 23945 . + . ID=gene-AC57_RS15430;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;locus_tag=AC57_RS15430;old_locus_tag=AC57_1704 NZ_JJLR01000066.1 Protein Homology CDS 23328 23945 . + 0 ID=cds-WP_000213028.1;Parent=gene-AC57_RS15430;Dbxref=GenBank:WP_000213028.1;Name=WP_000213028.1;gbkey=CDS;gene=ynfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AC57_RS15430;product=DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG;protein_id=WP_000213028.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 23947 24801 . + . ID=gene-AC57_RS15425;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AC57_RS15425;old_locus_tag=AC57_1705 NZ_JJLR01000066.1 Protein Homology CDS 23947 24801 . + 0 ID=cds-WP_032236879.1;Parent=gene-AC57_RS15425;Dbxref=GenBank:WP_032236879.1;Name=WP_032236879.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416107.1;locus_tag=AC57_RS15425;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_032236879.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 24844 25458 . + . ID=gene-AC57_RS15420;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AC57_RS15420;old_locus_tag=AC57_1706 NZ_JJLR01000066.1 Protein Homology CDS 24844 25458 . + 0 ID=cds-WP_000148710.1;Parent=gene-AC57_RS15420;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AC57_RS15420;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 25617 26909 . + . ID=gene-AC57_RS15415;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AC57_RS15415;old_locus_tag=AC57_1707 NZ_JJLR01000066.1 Protein Homology CDS 25617 26909 . + 0 ID=cds-WP_001315626.1;Parent=gene-AC57_RS15415;Dbxref=GenBank:WP_001315626.1;Name=WP_001315626.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AC57_RS15415;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_001315626.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 26862 27557 . - . ID=gene-AC57_RS15410;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AC57_RS15410;old_locus_tag=AC57_1708 NZ_JJLR01000066.1 Protein Homology CDS 26862 27557 . - 0 ID=cds-WP_000919231.1;Parent=gene-AC57_RS15410;Dbxref=GenBank:WP_000919231.1;Name=WP_000919231.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AC57_RS15410;product=dethiobiotin synthase;protein_id=WP_000919231.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 27682 28902 . - . ID=gene-AC57_RS15405;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AC57_RS15405;old_locus_tag=AC57_1709 NZ_JJLR01000066.1 Protein Homology CDS 27682 28902 . - 0 ID=cds-WP_000225262.1;Parent=gene-AC57_RS15405;Dbxref=GenBank:WP_000225262.1;Name=WP_000225262.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416111.1;locus_tag=AC57_RS15405;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225262.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 29037 29930 . - . ID=gene-AC57_RS15400;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AC57_RS15400;old_locus_tag=AC57_1710 NZ_JJLR01000066.1 Protein Homology CDS 29037 29930 . - 0 ID=cds-WP_001019525.1;Parent=gene-AC57_RS15400;Dbxref=GenBank:WP_001019525.1;Name=WP_001019525.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416112.1;locus_tag=AC57_RS15400;product=LysR family transcriptional regulator;protein_id=WP_001019525.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 30037 31290 . + . ID=gene-AC57_RS15395;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AC57_RS15395;old_locus_tag=AC57_1711 NZ_JJLR01000066.1 Protein Homology CDS 30037 31290 . + 0 ID=cds-WP_032279498.1;Parent=gene-AC57_RS15395;Dbxref=GenBank:WP_032279498.1;Name=WP_032279498.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416113.1;locus_tag=AC57_RS15395;product=MFS transporter;protein_id=WP_032279498.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 31339 31458 . - . ID=gene-AC57_RS31225;Name=AC57_RS31225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31225;old_locus_tag=AC57_1712 NZ_JJLR01000066.1 Protein Homology CDS 31339 31458 . - 0 ID=cds-WP_001299090.1;Parent=gene-AC57_RS31225;Dbxref=GenBank:WP_001299090.1;Name=WP_001299090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=AC57_RS31225;product=KPN_01571 family protein;protein_id=WP_001299090.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 31714 32022 . + . ID=gene-AC57_RS15390;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AC57_RS15390;old_locus_tag=AC57_1713 NZ_JJLR01000066.1 Protein Homology CDS 31714 32022 . + 0 ID=cds-WP_212592737.1;Parent=gene-AC57_RS15390;Dbxref=GenBank:WP_212592737.1;Name=WP_212592737.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416114.2;locus_tag=AC57_RS15390;product=acid resistance repetitive basic protein Asr;protein_id=WP_212592737.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 32115 32198 . + . ID=gene-AC57_RS0124005;Name=AC57_RS0124005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124005 NZ_JJLR01000066.1 Protein Homology CDS 32115 32198 . + 0 ID=cds-WP_000233090.1;Parent=gene-AC57_RS0124005;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AC57_RS0124005;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 32298 33119 . + . ID=gene-AC57_RS15385;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AC57_RS15385;old_locus_tag=AC57_1714 NZ_JJLR01000066.1 Protein Homology CDS 32298 33119 . + 0 ID=cds-WP_001260865.1;Parent=gene-AC57_RS15385;Dbxref=GenBank:WP_001260865.1;Name=WP_001260865.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416115.1;locus_tag=AC57_RS15385;product=trypsin-like serine peptidase;protein_id=WP_001260865.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 33158 33487 . - . ID=gene-AC57_RS15380;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AC57_RS15380;old_locus_tag=AC57_1715 NZ_JJLR01000066.1 Protein Homology CDS 33158 33487 . - 0 ID=cds-WP_000046661.1;Parent=gene-AC57_RS15380;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AC57_RS15380;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 33474 33839 . - . ID=gene-AC57_RS15375;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AC57_RS15375;old_locus_tag=AC57_1716 NZ_JJLR01000066.1 Protein Homology CDS 33474 33839 . - 0 ID=cds-WP_000276149.1;Parent=gene-AC57_RS15375;Dbxref=GenBank:WP_000276149.1;Name=WP_000276149.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AC57_RS15375;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 33946 34116 . - . ID=gene-AC57_RS31230;Name=AC57_RS31230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31230 NZ_JJLR01000066.1 Protein Homology CDS 33946 34116 . - 0 ID=cds-WP_001303517.1;Parent=gene-AC57_RS31230;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AC57_RS31230;product=protein YdgV;protein_id=WP_001303517.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 34251 35285 . + . ID=gene-AC57_RS15370;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AC57_RS15370;old_locus_tag=AC57_1717 NZ_JJLR01000066.1 Protein Homology CDS 34251 35285 . + 0 ID=cds-WP_001118241.1;Parent=gene-AC57_RS15370;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AC57_RS15370;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 35310 36698 . - . ID=gene-AC57_RS15365;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AC57_RS15365;old_locus_tag=AC57_1718 NZ_JJLR01000066.1 Protein Homology CDS 35310 36698 . - 0 ID=cds-WP_000014036.1;Parent=gene-AC57_RS15365;Dbxref=GenBank:WP_000014036.1;Name=WP_000014036.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AC57_RS15365;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 36709 38241 . - . ID=gene-AC57_RS15360;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AC57_RS15360;old_locus_tag=AC57_1719 NZ_JJLR01000066.1 Protein Homology CDS 36709 38241 . - 0 ID=cds-WP_001300486.1;Parent=gene-AC57_RS15360;Dbxref=GenBank:WP_001300486.1;Name=WP_001300486.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AC57_RS15360;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_001300486.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 38765 39709 . + . ID=gene-AC57_RS15355;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AC57_RS15355;old_locus_tag=AC57_1720 NZ_JJLR01000066.1 Protein Homology CDS 38765 39709 . + 0 ID=cds-WP_000769322.1;Parent=gene-AC57_RS15355;Dbxref=GenBank:WP_000769322.1;Name=WP_000769322.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AC57_RS15355;product=DUF1471 family protein YdgH;protein_id=WP_000769322.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 39895 41277 . + . ID=gene-AC57_RS15350;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AC57_RS15350;old_locus_tag=AC57_1721 NZ_JJLR01000066.1 Protein Homology CDS 39895 41277 . + 0 ID=cds-WP_000412379.1;Parent=gene-AC57_RS15350;Dbxref=GenBank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AC57_RS15350;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 41314 42036 . + . ID=gene-AC57_RS15345;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AC57_RS15345;old_locus_tag=AC57_1722 NZ_JJLR01000066.1 Protein Homology CDS 41314 42036 . + 0 ID=cds-WP_000520804.1;Parent=gene-AC57_RS15345;Dbxref=GenBank:WP_000520804.1;Name=WP_000520804.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AC57_RS15345;product=dihydromonapterin reductase;protein_id=WP_000520804.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 42033 42368 . - . ID=gene-AC57_RS15340;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AC57_RS15340;old_locus_tag=AC57_1723 NZ_JJLR01000066.1 Protein Homology CDS 42033 42368 . - 0 ID=cds-WP_000524868.1;Parent=gene-AC57_RS15340;Dbxref=GenBank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AC57_RS15340;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 42497 43216 . + . ID=gene-AC57_RS15335;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AC57_RS15335;old_locus_tag=AC57_1724 NZ_JJLR01000066.1 Protein Homology CDS 42497 43216 . + 0 ID=cds-WP_001092508.1;Parent=gene-AC57_RS15335;Dbxref=GenBank:WP_001092508.1;Name=WP_001092508.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AC57_RS15335;product=two-component system response regulator RstA;protein_id=WP_001092508.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 43220 44521 . + . ID=gene-AC57_RS15330;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AC57_RS15330;old_locus_tag=AC57_1725 NZ_JJLR01000066.1 Protein Homology CDS 43220 44521 . + 0 ID=cds-WP_001405241.1;Parent=gene-AC57_RS15330;Dbxref=GenBank:WP_001405241.1;Name=WP_001405241.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416126.1;locus_tag=AC57_RS15330;product=two-component system sensor histidine kinase RstB;protein_id=WP_001405241.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 44597 45526 . + . ID=gene-AC57_RS15325;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AC57_RS15325;old_locus_tag=AC57_1726 NZ_JJLR01000066.1 Protein Homology CDS 44597 45526 . + 0 ID=cds-WP_001427663.1;Parent=gene-AC57_RS15325;Dbxref=GenBank:WP_001427663.1;Name=WP_001427663.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310343.1;locus_tag=AC57_RS15325;product=DNA replication terminus site-binding protein;protein_id=WP_001427663.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 45523 46926 . - . ID=gene-AC57_RS15320;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AC57_RS15320;old_locus_tag=AC57_1727 NZ_JJLR01000066.1 Protein Homology CDS 45523 46926 . - 0 ID=cds-WP_001099085.1;Parent=gene-AC57_RS15320;Dbxref=GenBank:WP_001099085.1;Name=WP_001099085.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416128.1;locus_tag=AC57_RS15320;product=class II fumarate hydratase;protein_id=WP_001099085.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 47069 48715 . - . ID=gene-AC57_RS15315;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AC57_RS15315;old_locus_tag=AC57_1728 NZ_JJLR01000066.1 Protein Homology CDS 47069 48715 . - 0 ID=cds-WP_000066639.1;Parent=gene-AC57_RS15315;Dbxref=GenBank:WP_000066639.1;Name=WP_000066639.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AC57_RS15315;product=class I fumarate hydratase;protein_id=WP_000066639.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 48914 50089 . + . ID=gene-AC57_RS15310;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AC57_RS15310;old_locus_tag=AC57_1729 NZ_JJLR01000066.1 Protein Homology CDS 48914 50089 . + 0 ID=cds-WP_001170664.1;Parent=gene-AC57_RS15310;Dbxref=GenBank:WP_001170664.1;Name=WP_001170664.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416130.3;locus_tag=AC57_RS15310;product=mannose-6-phosphate isomerase;protein_id=WP_001170664.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 50190 51698 . + . ID=gene-AC57_RS15305;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AC57_RS15305;old_locus_tag=AC57_1730 NZ_JJLR01000066.1 Protein Homology CDS 50190 51698 . + 0 ID=cds-WP_001043339.1;Parent=gene-AC57_RS15305;Dbxref=GenBank:WP_001043339.1;Name=WP_001043339.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416131.1;locus_tag=AC57_RS15305;product=YdgA family protein;protein_id=WP_001043339.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 51924 53189 . - . ID=gene-AC57_RS15300;Name=uidC;gbkey=Gene;gene=uidC;gene_biotype=protein_coding;locus_tag=AC57_RS15300;old_locus_tag=AC57_1731 NZ_JJLR01000066.1 Protein Homology CDS 51924 53189 . - 0 ID=cds-WP_032236881.1;Parent=gene-AC57_RS15300;Dbxref=GenBank:WP_032236881.1;Name=WP_032236881.1;gbkey=CDS;gene=uidC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AC57_RS15300;product=glucuronide uptake porin UidC;protein_id=WP_032236881.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 53228 54601 . - . ID=gene-AC57_RS15295;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AC57_RS15295;old_locus_tag=AC57_1732 NZ_JJLR01000066.1 Protein Homology CDS 53228 54601 . - 0 ID=cds-WP_001075863.1;Parent=gene-AC57_RS15295;Dbxref=GenBank:WP_001075863.1;Name=WP_001075863.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416133.1;locus_tag=AC57_RS15295;product=glucuronide transporter;protein_id=WP_001075863.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 54598 56409 . - . ID=gene-AC57_RS15290;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=AC57_RS15290;old_locus_tag=AC57_1733 NZ_JJLR01000066.1 Protein Homology CDS 54598 56409 . - 0 ID=cds-WP_032236883.1;Parent=gene-AC57_RS15290;Dbxref=GenBank:WP_032236883.1;Name=WP_032236883.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AC57_RS15290;product=beta-glucuronidase;protein_id=WP_032236883.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 56800 57390 . - . ID=gene-AC57_RS15285;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AC57_RS15285;old_locus_tag=AC57_1734 NZ_JJLR01000066.1 Protein Homology CDS 56800 57390 . - 0 ID=cds-WP_000969092.1;Parent=gene-AC57_RS15285;Dbxref=GenBank:WP_000969092.1;Name=WP_000969092.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AC57_RS15285;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969092.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 57611 58378 . - . ID=gene-AC57_RS15280;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AC57_RS15280;old_locus_tag=AC57_1735 NZ_JJLR01000066.1 Protein Homology CDS 57611 58378 . - 0 ID=cds-WP_032253476.1;Parent=gene-AC57_RS15280;Dbxref=GenBank:WP_032253476.1;Name=WP_032253476.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AC57_RS15280;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_032253476.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 58490 59518 . - . ID=gene-AC57_RS15275;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AC57_RS15275;old_locus_tag=AC57_1736 NZ_JJLR01000066.1 Protein Homology CDS 58490 59518 . - 0 ID=cds-WP_000179510.1;Parent=gene-AC57_RS15275;Dbxref=GenBank:WP_000179510.1;Name=WP_000179510.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416137.1;locus_tag=AC57_RS15275;product=mal regulon transcriptional regulator MalI;protein_id=WP_000179510.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 59693 61285 . + . ID=gene-AC57_RS15270;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AC57_RS15270;old_locus_tag=AC57_1737 NZ_JJLR01000066.1 Protein Homology CDS 59693 61285 . + 0 ID=cds-WP_000125609.1;Parent=gene-AC57_RS15270;Dbxref=GenBank:WP_000125609.1;Name=WP_000125609.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AC57_RS15270;product=PTS maltose transporter subunit IICB;protein_id=WP_000125609.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 61295 62467 . + . ID=gene-AC57_RS15265;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AC57_RS15265;old_locus_tag=AC57_1738 NZ_JJLR01000066.1 Protein Homology CDS 61295 62467 . + 0 ID=cds-WP_032279495.1;Parent=gene-AC57_RS15265;Dbxref=GenBank:WP_032279495.1;Name=WP_032279495.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707522.1;locus_tag=AC57_RS15265;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_032279495.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 62571 63572 . + . ID=gene-AC57_RS15260;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AC57_RS15260;old_locus_tag=AC57_1739 NZ_JJLR01000066.1 Protein Homology CDS 62571 63572 . + 0 ID=cds-WP_000567490.1;Parent=gene-AC57_RS15260;Dbxref=GenBank:WP_000567490.1;Name=WP_000567490.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AC57_RS15260;product=adenosine deaminase;protein_id=WP_000567490.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 63607 64647 . - . ID=gene-AC57_RS15255;Name=ydgJ;gbkey=Gene;gene=ydgJ;gene_biotype=protein_coding;locus_tag=AC57_RS15255;old_locus_tag=AC57_1740 NZ_JJLR01000066.1 Protein Homology CDS 63607 64647 . - 0 ID=cds-WP_001282516.1;Parent=gene-AC57_RS15255;Dbxref=GenBank:WP_001282516.1;Name=WP_001282516.1;gbkey=CDS;gene=ydgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AC57_RS15255;product=oxidoreductase;protein_id=WP_001282516.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 64890 65015 . + . ID=gene-AC57_RS0124010;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AC57_RS0124010 NZ_JJLR01000066.1 Protein Homology CDS 64890 65015 . + 0 ID=cds-WP_001300888.1;Parent=gene-AC57_RS0124010;Dbxref=GenBank:WP_001300888.1;Name=WP_001300888.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025303.1;locus_tag=AC57_RS0124010;product=division septum protein Blr;protein_id=WP_001300888.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 65288 65503 . + . ID=gene-AC57_RS15250;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AC57_RS15250;old_locus_tag=AC57_1741 NZ_JJLR01000066.1 Protein Homology CDS 65288 65503 . + 0 ID=cds-WP_000217950.1;Parent=gene-AC57_RS15250;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AC57_RS15250;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 65589 66029 . + . ID=gene-AC57_RS15245;Name=ydgK;gbkey=Gene;gene=ydgK;gene_biotype=protein_coding;locus_tag=AC57_RS15245;old_locus_tag=AC57_1742 NZ_JJLR01000066.1 Protein Homology CDS 65589 66029 . + 0 ID=cds-WP_001310854.1;Parent=gene-AC57_RS15245;Dbxref=GenBank:WP_001310854.1;Name=WP_001310854.1;gbkey=CDS;gene=ydgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416143.2;locus_tag=AC57_RS15245;product=DUF2569 domain-containing protein;protein_id=WP_001310854.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 66106 66687 . + . ID=gene-AC57_RS15240;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AC57_RS15240;old_locus_tag=AC57_1743 NZ_JJLR01000066.1 Protein Homology CDS 66106 66687 . + 0 ID=cds-WP_032236888.1;Parent=gene-AC57_RS15240;Dbxref=GenBank:WP_032236888.1;Name=WP_032236888.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AC57_RS15240;product=electron transport complex subunit RsxA;protein_id=WP_032236888.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 66687 67265 . + . ID=gene-AC57_RS15235;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AC57_RS15235;old_locus_tag=AC57_1744 NZ_JJLR01000066.1 Protein Homology CDS 66687 67265 . + 0 ID=cds-WP_000991805.1;Parent=gene-AC57_RS15235;Dbxref=GenBank:WP_000991805.1;Name=WP_000991805.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416145.1;locus_tag=AC57_RS15235;product=electron transport complex subunit RsxB;protein_id=WP_000991805.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 67258 69288 . + . ID=gene-AC57_RS15230;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AC57_RS15230;old_locus_tag=AC57_1745 NZ_JJLR01000066.1 Protein Homology CDS 67258 69288 . + 0 ID=cds-WP_032285689.1;Parent=gene-AC57_RS15230;Dbxref=GenBank:WP_032285689.1;Name=WP_032285689.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000915716.1;locus_tag=AC57_RS15230;product=electron transport complex subunit RsxC;protein_id=WP_032285689.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 69289 70347 . + . ID=gene-AC57_RS15225;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AC57_RS15225;old_locus_tag=AC57_1746 NZ_JJLR01000066.1 Protein Homology CDS 69289 70347 . + 0 ID=cds-WP_032279492.1;Parent=gene-AC57_RS15225;Dbxref=GenBank:WP_032279492.1;Name=WP_032279492.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416147.1;locus_tag=AC57_RS15225;product=electron transport complex subunit RsxD;protein_id=WP_032279492.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 70351 70971 . + . ID=gene-AC57_RS15220;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AC57_RS15220;old_locus_tag=AC57_1747 NZ_JJLR01000066.1 Protein Homology CDS 70351 70971 . + 0 ID=cds-WP_000920784.1;Parent=gene-AC57_RS15220;Dbxref=GenBank:WP_000920784.1;Name=WP_000920784.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AC57_RS15220;product=electron transport complex subunit RsxG;protein_id=WP_000920784.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 70975 71670 . + . ID=gene-AC57_RS15215;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AC57_RS15215;old_locus_tag=AC57_1748 NZ_JJLR01000066.1 Protein Homology CDS 70975 71670 . + 0 ID=cds-WP_001289652.1;Parent=gene-AC57_RS15215;Dbxref=GenBank:WP_001289652.1;Name=WP_001289652.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416149.1;locus_tag=AC57_RS15215;product=electron transport complex subunit RsxE;protein_id=WP_001289652.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 71670 72305 . + . ID=gene-AC57_RS15210;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AC57_RS15210;old_locus_tag=AC57_1749 NZ_JJLR01000066.1 Protein Homology CDS 71670 72305 . + 0 ID=cds-WP_001030339.1;Parent=gene-AC57_RS15210;Dbxref=GenBank:WP_001030339.1;Name=WP_001030339.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AC57_RS15210;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 72916 74418 . + . ID=gene-AC57_RS15205;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AC57_RS15205;old_locus_tag=AC57_1750 NZ_JJLR01000066.1 Protein Homology CDS 72916 74418 . + 0 ID=cds-WP_000100932.1;Parent=gene-AC57_RS15205;Dbxref=GenBank:WP_000100932.1;Name=WP_000100932.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416151.1;locus_tag=AC57_RS15205;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100932.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 74524 75129 . + . ID=gene-AC57_RS15200;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AC57_RS15200;old_locus_tag=AC57_1751 NZ_JJLR01000066.1 Protein Homology CDS 74524 75129 . + 0 ID=cds-WP_000765749.1;Parent=gene-AC57_RS15200;Dbxref=GenBank:WP_000765749.1;Name=WP_000765749.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AC57_RS15200;product=glutathione transferase GstA;protein_id=WP_000765749.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 75173 76036 . - . ID=gene-AC57_RS15195;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AC57_RS15195;old_locus_tag=AC57_1752 NZ_JJLR01000066.1 Protein Homology CDS 75173 76036 . - 0 ID=cds-WP_001307229.1;Parent=gene-AC57_RS15195;Dbxref=GenBank:WP_001307229.1;Name=WP_001307229.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416153.1;locus_tag=AC57_RS15195;product=pyridoxal kinase;protein_id=WP_001307229.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 76095 77369 . - . ID=gene-AC57_RS15190;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AC57_RS15190;old_locus_tag=AC57_1753 NZ_JJLR01000066.1 Protein Homology CDS 76095 77369 . - 0 ID=cds-WP_001295400.1;Parent=gene-AC57_RS15190;Dbxref=GenBank:WP_001295400.1;Name=WP_001295400.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AC57_RS15190;product=tyrosine--tRNA ligase;protein_id=WP_001295400.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 77498 78154 . - . ID=gene-AC57_RS15185;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AC57_RS15185;old_locus_tag=AC57_1754 NZ_JJLR01000066.1 Protein Homology CDS 77498 78154 . - 0 ID=cds-WP_001282319.1;Parent=gene-AC57_RS15185;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AC57_RS15185;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 78213 78542 . - . ID=gene-AC57_RS15180;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AC57_RS15180;old_locus_tag=AC57_1755 NZ_JJLR01000066.1 Protein Homology CDS 78213 78542 . - 0 ID=cds-WP_000178044.1;Parent=gene-AC57_RS15180;Dbxref=GenBank:WP_000178044.1;Name=WP_000178044.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AC57_RS15180;product=C-type lysozyme inhibitor;protein_id=WP_000178044.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 78640 79749 . - . ID=gene-AC57_RS15175;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AC57_RS15175;old_locus_tag=AC57_1756 NZ_JJLR01000066.1 Protein Homology CDS 78640 79749 . - 0 ID=cds-WP_000835077.1;Parent=gene-AC57_RS15175;Dbxref=GenBank:WP_000835077.1;Name=WP_000835077.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AC57_RS15175;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_000835077.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 80023 80490 . + . ID=gene-AC57_RS15170;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AC57_RS15170;old_locus_tag=AC57_1757 NZ_JJLR01000066.1 Protein Homology CDS 80023 80490 . + 0 ID=cds-WP_000597196.1;Parent=gene-AC57_RS15170;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AC57_RS15170;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 80537 80971 . - . ID=gene-AC57_RS15165;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AC57_RS15165;old_locus_tag=AC57_1758 NZ_JJLR01000066.1 Protein Homology CDS 80537 80971 . - 0 ID=cds-WP_001296943.1;Parent=gene-AC57_RS15165;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AC57_RS15165;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 81172 81408 . + . ID=gene-AC57_RS15160;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=AC57_RS15160;old_locus_tag=AC57_1760 NZ_JJLR01000066.1 Protein Homology CDS 81172 81408 . + 0 ID=cds-WP_000670998.1;Parent=gene-AC57_RS15160;Dbxref=GenBank:WP_000670998.1;Name=WP_000670998.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydhI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AC57_RS15160;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 81411 82268 . + . ID=gene-AC57_RS15155;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AC57_RS15155;old_locus_tag=AC57_1761 NZ_JJLR01000066.1 Protein Homology CDS 81411 82268 . + 0 ID=cds-WP_001301002.1;Parent=gene-AC57_RS15155;Dbxref=GenBank:WP_001301002.1;Name=WP_001301002.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310380.2;locus_tag=AC57_RS15155;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001301002.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 82268 84280 . + . ID=gene-AC57_RS15150;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AC57_RS15150;old_locus_tag=AC57_1762 NZ_JJLR01000066.1 Protein Homology CDS 82268 84280 . + 0 ID=cds-WP_021546955.1;Parent=gene-AC57_RS15150;Dbxref=GenBank:WP_021546955.1;Name=WP_021546955.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AC57_RS15150;product=FUSC family protein;protein_id=WP_021546955.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 84281 84802 . - . ID=gene-AC57_RS15145;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AC57_RS15145;old_locus_tag=AC57_1763 NZ_JJLR01000066.1 Protein Homology CDS 84281 84802 . - 0 ID=cds-WP_001296937.1;Parent=gene-AC57_RS15145;Dbxref=GenBank:WP_001296937.1;Name=WP_001296937.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AC57_RS15145;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_001296937.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 84883 85779 . - . ID=gene-AC57_RS15140;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AC57_RS15140;old_locus_tag=AC57_1764 NZ_JJLR01000066.1 Protein Homology CDS 84883 85779 . - 0 ID=cds-WP_000250656.1;Parent=gene-AC57_RS15140;Dbxref=GenBank:WP_000250656.1;Name=WP_000250656.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AC57_RS15140;product=aldo/keto reductase;protein_id=WP_000250656.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 85828 86067 . - . ID=gene-AC57_RS0124020;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AC57_RS0124020 NZ_JJLR01000066.1 Protein Homology CDS 85828 86067 . - 0 ID=cds-WP_000840481.1;Parent=gene-AC57_RS0124020;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AC57_RS0124020;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 86170 86769 . + . ID=gene-AC57_RS15135;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AC57_RS15135;old_locus_tag=AC57_1766 NZ_JJLR01000066.1 Protein Homology CDS 86170 86769 . + 0 ID=cds-WP_001032936.1;Parent=gene-AC57_RS15135;Dbxref=GenBank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AC57_RS15135;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 86806 87903 . + . ID=gene-AC57_RS15130;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AC57_RS15130;old_locus_tag=AC57_1767 NZ_JJLR01000066.1 Protein Homology CDS 86806 87903 . + 0 ID=cds-WP_000093589.1;Parent=gene-AC57_RS15130;Dbxref=GenBank:WP_000093589.1;Name=WP_000093589.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AC57_RS15130;product=N-ethylmaleimide reductase;protein_id=WP_000093589.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 87984 88391 . + . ID=gene-AC57_RS15125;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AC57_RS15125;old_locus_tag=AC57_1768 NZ_JJLR01000066.1 Protein Homology CDS 87984 88391 . + 0 ID=cds-WP_001237796.1;Parent=gene-AC57_RS15125;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AC57_RS15125;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 88494 89141 . + . ID=gene-AC57_RS15120;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AC57_RS15120;old_locus_tag=AC57_1769 NZ_JJLR01000066.1 Protein Homology CDS 88494 89141 . + 0 ID=cds-WP_001282283.1;Parent=gene-AC57_RS15120;Dbxref=GenBank:WP_001282283.1;Name=WP_001282283.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416169.1;locus_tag=AC57_RS15120;product=ribonuclease T;protein_id=WP_001282283.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 89234 93850 . + . ID=gene-AC57_RS15115;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=AC57_RS15115;old_locus_tag=AC57_1770 NZ_JJLR01000066.1 Protein Homology CDS 89234 93850 . + 0 ID=cds-WP_001301008.1;Parent=gene-AC57_RS15115;Dbxref=GenBank:WP_001301008.1;Name=WP_001301008.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416170.1;locus_tag=AC57_RS15115;product=ATP-dependent helicase;protein_id=WP_001301008.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 93901 94248 . - . ID=gene-AC57_RS15110;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AC57_RS15110;old_locus_tag=AC57_1771 NZ_JJLR01000066.1 Protein Homology CDS 93901 94248 . - 0 ID=cds-WP_000108172.1;Parent=gene-AC57_RS15110;Dbxref=GenBank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AC57_RS15110;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 94582 95397 . + . ID=gene-AC57_RS15105;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AC57_RS15105;old_locus_tag=AC57_1773 NZ_JJLR01000066.1 Protein Homology CDS 94582 95397 . + 0 ID=cds-WP_000101193.1;Parent=gene-AC57_RS15105;Dbxref=GenBank:WP_000101193.1;Name=WP_000101193.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416172.1;locus_tag=AC57_RS15105;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101193.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 95525 96106 . + . ID=gene-AC57_RS15100;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AC57_RS15100;old_locus_tag=AC57_1774 NZ_JJLR01000066.1 Protein Homology CDS 95525 96106 . + 0 ID=cds-WP_000007283.1;Parent=gene-AC57_RS15100;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AC57_RS15100;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 96341 97510 . - . ID=gene-AC57_RS15095;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AC57_RS15095;old_locus_tag=AC57_1775 NZ_JJLR01000066.1 Protein Homology CDS 96341 97510 . - 0 ID=cds-WP_001390258.1;Parent=gene-AC57_RS15095;Dbxref=GenBank:WP_001390258.1;Name=WP_001390258.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AC57_RS15095;product=MFS transporter;protein_id=WP_001390258.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 97676 97765 . - . ID=gene-AC57_RS0124025;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AC57_RS0124025;old_locus_tag=AC57_1776 NZ_JJLR01000066.1 Protein Homology CDS 97676 97765 . - 0 ID=cds-WP_000102278.1;Parent=gene-AC57_RS0124025;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AC57_RS0124025;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 98064 99089 . + . ID=gene-AC57_RS15090;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AC57_RS15090;old_locus_tag=AC57_1777 NZ_JJLR01000066.1 Protein Homology CDS 98064 99089 . + 0 ID=cds-WP_000190982.1;Parent=gene-AC57_RS15090;Dbxref=GenBank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AC57_RS15090;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 99086 100018 . - . ID=gene-AC57_RS15085;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AC57_RS15085;old_locus_tag=AC57_1778 NZ_JJLR01000066.1 Protein Homology CDS 99086 100018 . - 0 ID=cds-WP_001405254.1;Parent=gene-AC57_RS15085;Dbxref=GenBank:WP_001405254.1;Name=WP_001405254.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AC57_RS15085;product=DNA-binding transcriptional activator PunR;protein_id=WP_001405254.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 100131 101342 . + . ID=gene-AC57_RS15080;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AC57_RS15080;old_locus_tag=AC57_1779 NZ_JJLR01000066.1 Protein Homology CDS 100131 101342 . + 0 ID=cds-WP_001182363.1;Parent=gene-AC57_RS15080;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AC57_RS15080;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 101633 102781 . + . ID=gene-AC57_RS15075;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AC57_RS15075;old_locus_tag=AC57_1780 NZ_JJLR01000066.1 Protein Homology CDS 101633 102781 . + 0 ID=cds-WP_000098896.1;Parent=gene-AC57_RS15075;Dbxref=GenBank:WP_000098896.1;Name=WP_000098896.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AC57_RS15075;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098896.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 102821 103462 . - . ID=gene-AC57_RS15070;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AC57_RS15070;old_locus_tag=AC57_1781 NZ_JJLR01000066.1 Protein Homology CDS 102821 103462 . - 0 ID=cds-WP_000493947.1;Parent=gene-AC57_RS15070;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AC57_RS15070;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 103677 105050 . + . ID=gene-AC57_RS15065;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AC57_RS15065;old_locus_tag=AC57_1782 NZ_JJLR01000066.1 Protein Homology CDS 103677 105050 . + 0 ID=cds-WP_001174943.1;Parent=gene-AC57_RS15065;Dbxref=GenBank:WP_001174943.1;Name=WP_001174943.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AC57_RS15065;product=multidrug efflux MATE transporter MdtK;protein_id=WP_001174943.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 105091 106347 . - . ID=gene-AC57_RS15060;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AC57_RS15060;old_locus_tag=AC57_1783 NZ_JJLR01000066.1 Protein Homology CDS 105091 106347 . - 0 ID=cds-WP_000534272.1;Parent=gene-AC57_RS15060;Dbxref=GenBank:WP_000534272.1;Name=WP_000534272.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416181.1;locus_tag=AC57_RS15060;product=AIDA repeat-containing protein;protein_id=WP_000534272.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 106655 106731 . + . ID=gene-AC57_RS15055;Name=AC57_RS15055;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS15055;old_locus_tag=AC57_1784 NZ_JJLR01000066.1 tRNAscan-SE tRNA 106655 106731 . + . ID=rna-AC57_RS15055;Parent=gene-AC57_RS15055;anticodon=(pos:106689..106691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS15055;product=tRNA-Val NZ_JJLR01000066.1 tRNAscan-SE exon 106655 106731 . + . ID=exon-AC57_RS15055-1;Parent=rna-AC57_RS15055;anticodon=(pos:106689..106691);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS15055;product=tRNA-Val NZ_JJLR01000066.1 RefSeq gene 106736 106812 . + . ID=gene-AC57_RS15050;Name=AC57_RS15050;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS15050;old_locus_tag=AC57_1785 NZ_JJLR01000066.1 tRNAscan-SE tRNA 106736 106812 . + . ID=rna-AC57_RS15050;Parent=gene-AC57_RS15050;anticodon=(pos:106770..106772);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS15050;product=tRNA-Val NZ_JJLR01000066.1 tRNAscan-SE exon 106736 106812 . + . ID=exon-AC57_RS15050-1;Parent=rna-AC57_RS15050;anticodon=(pos:106770..106772);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS15050;product=tRNA-Val NZ_JJLR01000066.1 RefSeq gene 106920 107225 . + . ID=gene-AC57_RS15045;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AC57_RS15045;old_locus_tag=AC57_1786 NZ_JJLR01000066.1 Protein Homology CDS 106920 107225 . + 0 ID=cds-WP_000212680.1;Parent=gene-AC57_RS15045;Dbxref=GenBank:WP_000212680.1;Name=WP_000212680.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AC57_RS15045;product=monooxygenase;protein_id=WP_000212680.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 107351 108955 . + . ID=gene-AC57_RS15040;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=AC57_RS15040;old_locus_tag=AC57_1787 NZ_JJLR01000066.1 Protein Homology CDS 107351 108955 . + 0 ID=cds-WP_000716938.1;Parent=gene-AC57_RS15040;Dbxref=GenBank:WP_000716938.1;Name=WP_000716938.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310402.1;locus_tag=AC57_RS15040;product=FAD-NAD(P)-binding protein;protein_id=WP_000716938.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 108967 109779 . - . ID=gene-AC57_RS15035;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AC57_RS15035;old_locus_tag=AC57_1788 NZ_JJLR01000066.1 Protein Homology CDS 108967 109779 . - 0 ID=cds-WP_000587527.1;Parent=gene-AC57_RS15035;Dbxref=GenBank:WP_000587527.1;Name=WP_000587527.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AC57_RS15035;product=protein YdhT;protein_id=WP_000587527.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 109783 110568 . - . ID=gene-AC57_RS15030;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=AC57_RS15030;old_locus_tag=AC57_1789 NZ_JJLR01000066.1 Protein Homology CDS 109783 110568 . - 0 ID=cds-WP_001069979.1;Parent=gene-AC57_RS15030;Dbxref=GenBank:WP_001069979.1;Name=WP_001069979.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416185.1;locus_tag=AC57_RS15030;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_001069979.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 110565 111233 . - . ID=gene-AC57_RS15025;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AC57_RS15025;old_locus_tag=AC57_1790 NZ_JJLR01000066.1 Protein Homology CDS 110565 111233 . - 0 ID=cds-WP_001310861.1;Parent=gene-AC57_RS15025;Dbxref=GenBank:WP_001310861.1;Name=WP_001310861.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AC57_RS15025;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001310861.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 111297 111935 . - . ID=gene-AC57_RS15020;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AC57_RS15020;old_locus_tag=AC57_1791 NZ_JJLR01000066.1 Protein Homology CDS 111297 111935 . - 0 ID=cds-WP_001301419.1;Parent=gene-AC57_RS15020;Dbxref=GenBank:WP_001301419.1;Name=WP_001301419.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707570.2;locus_tag=AC57_RS15020;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001301419.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 111948 114050 . - . ID=gene-AC57_RS15015;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AC57_RS15015;old_locus_tag=AC57_1792 NZ_JJLR01000066.1 Protein Homology CDS 111948 114050 . - 0 ID=cds-WP_001273527.1;Parent=gene-AC57_RS15015;Dbxref=GenBank:WP_001273527.1;Name=WP_001273527.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=AC57_RS15015;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_001273527.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 114071 114697 . - . ID=gene-AC57_RS15010;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AC57_RS15010;old_locus_tag=AC57_1793 NZ_JJLR01000066.1 Protein Homology CDS 114071 114697 . - 0 ID=cds-WP_001070230.1;Parent=gene-AC57_RS15010;Dbxref=GenBank:WP_001070230.1;Name=WP_001070230.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AC57_RS15010;product=ferredoxin-like protein;protein_id=WP_001070230.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 115153 115362 . - . ID=gene-AC57_RS15005;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AC57_RS15005;old_locus_tag=AC57_1795 NZ_JJLR01000066.1 Protein Homology CDS 115153 115362 . - 0 ID=cds-WP_000528342.1;Parent=gene-AC57_RS15005;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AC57_RS15005;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 115717 115911 . + . ID=gene-AC57_RS30695;Name=AC57_RS30695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30695 NZ_JJLR01000066.1 Protein Homology CDS 115717 115911 . + 0 ID=cds-WP_240806354.1;Parent=gene-AC57_RS30695;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AC57_RS30695;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 115919 117331 . + . ID=gene-AC57_RS15000;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AC57_RS15000;old_locus_tag=AC57_1796 NZ_JJLR01000066.1 Protein Homology CDS 115919 117331 . + 0 ID=cds-WP_032236903.1;Parent=gene-AC57_RS15000;Dbxref=GenBank:WP_032236903.1;Name=WP_032236903.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AC57_RS15000;product=pyruvate kinase PykF;protein_id=WP_032236903.1;transl_table=11 NZ_JJLR01000066.1 RefSeq gene 117463 117732 . + . ID=gene-AC57_RS14995;Name=AC57_RS14995;end_range=117732,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14995;old_locus_tag=AC57_1797;partial=true NZ_JJLR01000066.1 Protein Homology CDS 117463 117732 . + 0 ID=cds-WP_000179209.1-2;Parent=gene-AC57_RS14995;Dbxref=GenBank:WP_000179209.1;Name=WP_000179209.1;end_range=117732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS14995;partial=true;product=IS1-like element transposase;protein_id=WP_000179209.1;transl_table=11 ##sequence-region NZ_JJLR01000067.1 1 25422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000067.1 RefSeq region 1 25422 . + . ID=NZ_JJLR01000067.1:1..25422;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000067.1 RefSeq pseudogene 1 201 . - . ID=gene-AC57_RS14990;Name=AC57_RS14990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14990;old_locus_tag=AC57_1798;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000067.1 Protein Homology CDS 1 201 . - 0 ID=cds-AC57_RS14990;Parent=gene-AC57_RS14990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS14990;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 493 783 . + . ID=gene-AC57_RS14985;Name=AC57_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14985;old_locus_tag=AC57_1800 NZ_JJLR01000067.1 Protein Homology CDS 493 783 . + 0 ID=cds-WP_021532981.1;Parent=gene-AC57_RS14985;Dbxref=GenBank:WP_021532981.1;Name=WP_021532981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100678.1;locus_tag=AC57_RS14985;product=DUF1778 domain-containing protein;protein_id=WP_021532981.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 774 1256 . + . ID=gene-AC57_RS14980;Name=AC57_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14980;old_locus_tag=AC57_1801 NZ_JJLR01000067.1 Protein Homology CDS 774 1256 . + 0 ID=cds-WP_032250661.1;Parent=gene-AC57_RS14980;Dbxref=GenBank:WP_032250661.1;Name=WP_032250661.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858192.1;locus_tag=AC57_RS14980;product=GNAT family N-acetyltransferase;protein_id=WP_032250661.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 1541 1798 . + . ID=gene-AC57_RS14975;Name=AC57_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14975;old_locus_tag=AC57_1802 NZ_JJLR01000067.1 Protein Homology CDS 1541 1798 . + 0 ID=cds-WP_032254237.1;Parent=gene-AC57_RS14975;Dbxref=GenBank:WP_032254237.1;Name=WP_032254237.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001404371.1;locus_tag=AC57_RS14975;product=replication regulatory protein RepA;protein_id=WP_032254237.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 1834 2067 . - . ID=gene-AC57_RS30700;Name=AC57_RS30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30700 NZ_JJLR01000067.1 Protein Homology CDS 1834 2067 . - 0 ID=cds-WP_235802559.1;Parent=gene-AC57_RS30700;Dbxref=GenBank:WP_235802559.1;Name=WP_235802559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001410080.1;locus_tag=AC57_RS30700;product=replication protein RepA;protein_id=WP_235802559.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 2058 2105 . + . ID=gene-AC57_RS30705;Name=AC57_RS30705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30705 NZ_JJLR01000067.1 Protein Homology CDS 2058 2105 . + 0 ID=cds-WP_234812421.1;Parent=gene-AC57_RS30705;Dbxref=GenBank:WP_234812421.1;Name=WP_234812421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=AC57_RS30705;product=hypothetical protein;protein_id=WP_234812421.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 2098 2961 . + . ID=gene-AC57_RS14970;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AC57_RS14970;old_locus_tag=AC57_1803 NZ_JJLR01000067.1 Protein Homology CDS 2098 2961 . + 0 ID=cds-WP_032254085.1;Parent=gene-AC57_RS14970;Dbxref=GenBank:WP_032254085.1;Name=WP_032254085.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AC57_RS14970;product=incFII family plasmid replication initiator RepA;protein_id=WP_032254085.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 3657 3797 . + . ID=gene-AC57_RS30260;Name=AC57_RS30260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30260;old_locus_tag=AC57_1804 NZ_JJLR01000067.1 Protein Homology CDS 3657 3797 . + 0 ID=cds-WP_173675592.1;Parent=gene-AC57_RS30260;Dbxref=GenBank:WP_173675592.1;Name=WP_173675592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004031751.1;locus_tag=AC57_RS30260;product=hypothetical protein;protein_id=WP_173675592.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 3921 4172 . + . ID=gene-AC57_RS14965;Name=AC57_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14965;old_locus_tag=AC57_1805 NZ_JJLR01000067.1 Protein Homology CDS 3921 4172 . + 0 ID=cds-WP_032254083.1;Parent=gene-AC57_RS14965;Dbxref=GenBank:WP_032254083.1;Name=WP_032254083.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=AC57_RS14965;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_032254083.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 4169 4456 . + . ID=gene-AC57_RS14960;Name=AC57_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14960;old_locus_tag=AC57_1806 NZ_JJLR01000067.1 Protein Homology CDS 4169 4456 . + 0 ID=cds-WP_032279934.1;Parent=gene-AC57_RS14960;Dbxref=GenBank:WP_032279934.1;Name=WP_032279934.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=AC57_RS14960;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_032279934.1;transl_table=11 NZ_JJLR01000067.1 RefSeq pseudogene 4594 4782 . - . ID=gene-AC57_RS0124030;Name=AC57_RS0124030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124030;partial=true;pseudo=true;start_range=.,4594 NZ_JJLR01000067.1 Protein Homology CDS 4594 4782 . - 0 ID=cds-AC57_RS0124030;Parent=gene-AC57_RS0124030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608690.1;locus_tag=AC57_RS0124030;partial=true;product=transposase;pseudo=true;start_range=.,4594;transl_table=11 NZ_JJLR01000067.1 RefSeq pseudogene 4993 5304 . - . ID=gene-AC57_RS14955;Name=AC57_RS14955;end_range=5304,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14955;old_locus_tag=AC57_1807;partial=true;pseudo=true NZ_JJLR01000067.1 Protein Homology CDS 4993 5304 . - 0 ID=cds-AC57_RS14955;Parent=gene-AC57_RS14955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=5304,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=AC57_RS14955;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000067.1 RefSeq pseudogene 5677 6000 . + . ID=gene-AC57_RS0124035;Name=AC57_RS0124035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124035;partial=true;pseudo=true;start_range=.,5677 NZ_JJLR01000067.1 Protein Homology CDS 5677 6000 . + 0 ID=cds-AC57_RS0124035;Parent=gene-AC57_RS0124035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS0124035;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,5677;transl_table=11 NZ_JJLR01000067.1 RefSeq pseudogene 6043 6193 . - . ID=gene-AC57_RS30710;Name=AC57_RS30710;end_range=6193,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30710;partial=true;pseudo=true;start_range=.,6043 NZ_JJLR01000067.1 Protein Homology CDS 6043 6193 . - 0 ID=cds-AC57_RS30710;Parent=gene-AC57_RS30710;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6193,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011069623.1;locus_tag=AC57_RS30710;partial=true;product=transposase;pseudo=true;start_range=.,6043;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 6586 7152 . - . ID=gene-AC57_RS0124045;Name=AC57_RS0124045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124045 NZ_JJLR01000067.1 GeneMarkS-2+ CDS 6586 7152 . - 0 ID=cds-WP_032279930.1;Parent=gene-AC57_RS0124045;Dbxref=GenBank:WP_032279930.1;Name=WP_032279930.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0124045;product=type IV pilus modification PilV family protein;protein_id=WP_032279930.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 7106 7630 . - . ID=gene-AC57_RS0124050;Name=AC57_RS0124050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124050 NZ_JJLR01000067.1 GeneMarkS-2+ CDS 7106 7630 . - 0 ID=cds-WP_032279929.1;Parent=gene-AC57_RS0124050;Dbxref=GenBank:WP_032279929.1;Name=WP_032279929.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0124050;product=type II secretion system protein;protein_id=WP_032279929.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 7627 8046 . - . ID=gene-AC57_RS0124055;Name=AC57_RS0124055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124055 NZ_JJLR01000067.1 GeneMarkS-2+ CDS 7627 8046 . - 0 ID=cds-WP_032279928.1;Parent=gene-AC57_RS0124055;Dbxref=GenBank:WP_032279928.1;Name=WP_032279928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0124055;product=hypothetical protein;protein_id=WP_032279928.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 8052 8582 . - . ID=gene-AC57_RS14950;Name=AC57_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14950;old_locus_tag=AC57_1811 NZ_JJLR01000067.1 GeneMarkS-2+ CDS 8052 8582 . - 0 ID=cds-WP_032279927.1;Parent=gene-AC57_RS14950;Dbxref=GenBank:WP_032279927.1;Name=WP_032279927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS14950;product=hypothetical protein;protein_id=WP_032279927.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 8572 9393 . - . ID=gene-AC57_RS14945;Name=AC57_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14945;old_locus_tag=AC57_1812 NZ_JJLR01000067.1 GeneMarkS-2+ CDS 8572 9393 . - 0 ID=cds-WP_032279926.1;Parent=gene-AC57_RS14945;Dbxref=GenBank:WP_032279926.1;Name=WP_032279926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS14945;product=hypothetical protein;protein_id=WP_032279926.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 9629 10243 . + . ID=gene-AC57_RS0124060;Name=AC57_RS0124060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124060 NZ_JJLR01000067.1 Protein Homology CDS 9629 10243 . + 0 ID=cds-WP_077756429.1;Parent=gene-AC57_RS0124060;Dbxref=GenBank:WP_077756429.1;Name=WP_077756429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575744.1;locus_tag=AC57_RS0124060;product=type 4 pilus major pilin;protein_id=WP_077756429.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 10294 10941 . + . ID=gene-AC57_RS0124065;Name=AC57_RS0124065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124065 NZ_JJLR01000067.1 Protein Homology CDS 10294 10941 . + 0 ID=cds-WP_032279925.1;Parent=gene-AC57_RS0124065;Dbxref=GenBank:WP_032279925.1;Name=WP_032279925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022136.6;locus_tag=AC57_RS0124065;product=TcpQ domain-containing protein;protein_id=WP_032279925.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 10954 12624 . + . ID=gene-AC57_RS14940;Name=AC57_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14940;old_locus_tag=AC57_1813 NZ_JJLR01000067.1 Protein Homology CDS 10954 12624 . + 0 ID=cds-WP_032279924.1;Parent=gene-AC57_RS14940;Dbxref=GenBank:WP_032279924.1;Name=WP_032279924.1;Ontology_term=GO:0009297,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575747.1;locus_tag=AC57_RS14940;product=secretin N-terminal domain-containing protein;protein_id=WP_032279924.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 12626 13891 . + . ID=gene-AC57_RS14935;Name=AC57_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14935;old_locus_tag=AC57_1814 NZ_JJLR01000067.1 GeneMarkS-2+ CDS 12626 13891 . + 0 ID=cds-WP_032268055.1;Parent=gene-AC57_RS14935;Dbxref=GenBank:WP_032268055.1;Name=WP_032268055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS14935;product=type 4b pilus protein PilO2;protein_id=WP_032268055.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 13933 14319 . + . ID=gene-AC57_RS0124070;Name=AC57_RS0124070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124070 NZ_JJLR01000067.1 GeneMarkS-2+ CDS 13933 14319 . + 0 ID=cds-WP_129944522.1;Parent=gene-AC57_RS0124070;Dbxref=GenBank:WP_129944522.1;Name=WP_129944522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0124070;product=hypothetical protein;protein_id=WP_129944522.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 14334 15953 . + . ID=gene-AC57_RS14930;Name=AC57_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14930;old_locus_tag=AC57_1816 NZ_JJLR01000067.1 Protein Homology CDS 14334 15953 . + 0 ID=cds-WP_032279923.1;Parent=gene-AC57_RS14930;Dbxref=GenBank:WP_032279923.1;Name=WP_032279923.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575752.1;locus_tag=AC57_RS14930;product=GspE/PulE family protein;protein_id=WP_032279923.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 15946 17016 . + . ID=gene-AC57_RS14925;Name=AC57_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14925;old_locus_tag=AC57_1817 NZ_JJLR01000067.1 Protein Homology CDS 15946 17016 . + 0 ID=cds-WP_032250285.1;Parent=gene-AC57_RS14925;Dbxref=GenBank:WP_032250285.1;Name=WP_032250285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575753.1;locus_tag=AC57_RS14925;product=type II secretion system F family protein;protein_id=WP_032250285.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 17024 17989 . + . ID=gene-AC57_RS14920;Name=AC57_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14920;old_locus_tag=AC57_1818 NZ_JJLR01000067.1 Protein Homology CDS 17024 17989 . + 0 ID=cds-WP_032265365.1;Parent=gene-AC57_RS14920;Dbxref=GenBank:WP_032265365.1;Name=WP_032265365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575754.1;locus_tag=AC57_RS14920;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_032265365.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 17994 18725 . + . ID=gene-AC57_RS0124075;Name=AC57_RS0124075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124075 NZ_JJLR01000067.1 Protein Homology CDS 17994 18725 . + 0 ID=cds-WP_001575755.1;Parent=gene-AC57_RS0124075;Dbxref=GenBank:WP_001575755.1;Name=WP_001575755.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575755.1;locus_tag=AC57_RS0124075;product=prepilin peptidase;protein_id=WP_001575755.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 18713 19129 . + . ID=gene-AC57_RS0124080;Name=AC57_RS0124080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124080 NZ_JJLR01000067.1 Protein Homology CDS 18713 19129 . + 0 ID=cds-WP_024193899.1;Parent=gene-AC57_RS0124080;Dbxref=GenBank:WP_024193899.1;Name=WP_024193899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.6;locus_tag=AC57_RS0124080;product=lytic transglycosylase domain-containing protein;protein_id=WP_024193899.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 19140 19778 . - . ID=gene-AC57_RS14915;Name=AC57_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14915;old_locus_tag=AC57_1821 NZ_JJLR01000067.1 Protein Homology CDS 19140 19778 . - 0 ID=cds-WP_032279921.1;Parent=gene-AC57_RS14915;Dbxref=GenBank:WP_032279921.1;Name=WP_032279921.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=AC57_RS14915;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_032279921.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 20203 20811 . + . ID=gene-AC57_RS30715;Name=AC57_RS30715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30715;old_locus_tag=AC57_1822 NZ_JJLR01000067.1 Protein Homology CDS 20203 20811 . + 0 ID=cds-WP_050440073.1;Parent=gene-AC57_RS30715;Dbxref=GenBank:WP_050440073.1;Name=WP_050440073.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837193.1;locus_tag=AC57_RS30715;product=type II secretion system protein;protein_id=WP_050440073.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 21200 21577 . - . ID=gene-AC57_RS0124090;Name=AC57_RS0124090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124090 NZ_JJLR01000067.1 Protein Homology CDS 21200 21577 . - 0 ID=cds-WP_001575759.1;Parent=gene-AC57_RS0124090;Dbxref=GenBank:WP_001575759.1;Name=WP_001575759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575759.1;locus_tag=AC57_RS0124090;product=hypothetical protein;protein_id=WP_001575759.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 21640 22494 . - . ID=gene-AC57_RS14910;Name=AC57_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14910;old_locus_tag=AC57_1823 NZ_JJLR01000067.1 Protein Homology CDS 21640 22494 . - 0 ID=cds-WP_032279920.1;Parent=gene-AC57_RS14910;Dbxref=GenBank:WP_032279920.1;Name=WP_032279920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575760.1;locus_tag=AC57_RS14910;product=hypothetical protein;protein_id=WP_032279920.1;transl_table=11 NZ_JJLR01000067.1 RefSeq pseudogene 23225 23341 . + . ID=gene-AC57_RS30720;Name=AC57_RS30720;end_range=23341,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30720;partial=true;pseudo=true;start_range=.,23225 NZ_JJLR01000067.1 Protein Homology CDS 23225 23341 . + 0 ID=cds-AC57_RS30720;Parent=gene-AC57_RS30720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=23341,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851036.1;locus_tag=AC57_RS30720;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;start_range=.,23225;transl_table=11 NZ_JJLR01000067.1 RefSeq pseudogene 23329 23687 . + . ID=gene-AC57_RS0124095;Name=AC57_RS0124095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124095;partial=true;pseudo=true;start_range=.,23329 NZ_JJLR01000067.1 Protein Homology CDS 23329 23687 . + 0 ID=cds-AC57_RS0124095;Parent=gene-AC57_RS0124095;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843781.1;locus_tag=AC57_RS0124095;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;start_range=.,23329;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 23828 24028 . - . ID=gene-AC57_RS29790;Name=AC57_RS29790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29790 NZ_JJLR01000067.1 Protein Homology CDS 23828 24028 . - 0 ID=cds-WP_001575762.1;Parent=gene-AC57_RS29790;Dbxref=GenBank:WP_001575762.1;Name=WP_001575762.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033650.1;locus_tag=AC57_RS29790;product=ANR family transcriptional regulator;protein_id=WP_001575762.1;transl_table=11 NZ_JJLR01000067.1 RefSeq gene 24728 25422 . - . ID=gene-AC57_RS0124100;Name=AC57_RS0124100;end_range=25422,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124100;old_locus_tag=AC57_1827;partial=true NZ_JJLR01000067.1 Protein Homology CDS 25176 25422 . - 0 ID=cds-WP_249401508.1;Parent=gene-AC57_RS0124100;Dbxref=GenBank:WP_249401508.1;Name=WP_249401508.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=25422,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0124100;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_249401508.1;transl_table=11 NZ_JJLR01000067.1 Protein Homology CDS 24728 25176 . - 2 ID=cds-WP_249401508.1;Parent=gene-AC57_RS0124100;Dbxref=GenBank:WP_249401508.1;Name=WP_249401508.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0124100;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_249401508.1;transl_table=11 ##sequence-region NZ_JJLR01000068.1 1 56075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000068.1 RefSeq region 1 56075 . + . ID=NZ_JJLR01000068.1:1..56075;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000068.1 RefSeq gene 1 239 . + . ID=gene-AC57_RS14905;Name=AC57_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14905;old_locus_tag=AC57_1828;partial=true;start_range=.,1 NZ_JJLR01000068.1 Protein Homology CDS 1 239 . + 2 ID=cds-WP_001394976.1;Parent=gene-AC57_RS14905;Dbxref=GenBank:WP_001394976.1;Name=WP_001394976.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015365.6;locus_tag=AC57_RS14905;partial=true;product=IS1 family transposase;protein_id=WP_001394976.1;start_range=.,1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 498 734 . + . ID=gene-AC57_RS14900;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AC57_RS14900;old_locus_tag=AC57_1829 NZ_JJLR01000068.1 Protein Homology CDS 498 734 . + 0 ID=cds-WP_000648420.1;Parent=gene-AC57_RS14900;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AC57_RS14900;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 798 1802 . - . ID=gene-AC57_RS14895;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AC57_RS14895;old_locus_tag=AC57_1830 NZ_JJLR01000068.1 Protein Homology CDS 798 1802 . - 0 ID=cds-WP_000817105.1;Parent=gene-AC57_RS14895;Dbxref=GenBank:WP_000817105.1;Name=WP_000817105.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416193.1;locus_tag=AC57_RS14895;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817105.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 1951 2367 . - . ID=gene-AC57_RS14890;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AC57_RS14890;old_locus_tag=AC57_1831 NZ_JJLR01000068.1 Protein Homology CDS 1951 2367 . - 0 ID=cds-WP_001196530.1;Parent=gene-AC57_RS14890;Dbxref=GenBank:WP_001196530.1;Name=WP_001196530.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AC57_RS14890;product=cysteine desulfuration protein SufE;protein_id=WP_001196530.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 2380 3600 . - . ID=gene-AC57_RS14885;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AC57_RS14885;old_locus_tag=AC57_1832 NZ_JJLR01000068.1 Protein Homology CDS 2380 3600 . - 0 ID=cds-WP_000144539.1;Parent=gene-AC57_RS14885;Dbxref=GenBank:WP_000144539.1;Name=WP_000144539.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=AC57_RS14885;product=cysteine desulfurase SufS;protein_id=WP_000144539.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 3597 4868 . - . ID=gene-AC57_RS14880;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AC57_RS14880;old_locus_tag=AC57_1833 NZ_JJLR01000068.1 Protein Homology CDS 3597 4868 . - 0 ID=cds-WP_032236904.1;Parent=gene-AC57_RS14880;Dbxref=GenBank:WP_032236904.1;Name=WP_032236904.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707580.1;locus_tag=AC57_RS14880;product=Fe-S cluster assembly protein SufD;protein_id=WP_032236904.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 4843 5589 . - . ID=gene-AC57_RS14875;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AC57_RS14875;old_locus_tag=AC57_1834 NZ_JJLR01000068.1 Protein Homology CDS 4843 5589 . - 0 ID=cds-WP_000948863.1;Parent=gene-AC57_RS14875;Dbxref=GenBank:WP_000948863.1;Name=WP_000948863.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AC57_RS14875;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_000948863.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 5599 7086 . - . ID=gene-AC57_RS14870;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AC57_RS14870;old_locus_tag=AC57_1835 NZ_JJLR01000068.1 Protein Homology CDS 5599 7086 . - 0 ID=cds-WP_000089364.1;Parent=gene-AC57_RS14870;Dbxref=GenBank:WP_000089364.1;Name=WP_000089364.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AC57_RS14870;product=Fe-S cluster assembly protein SufB;protein_id=WP_000089364.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 7095 7463 . - . ID=gene-AC57_RS14865;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AC57_RS14865;old_locus_tag=AC57_1836 NZ_JJLR01000068.1 Protein Homology CDS 7095 7463 . - 0 ID=cds-WP_000367160.1;Parent=gene-AC57_RS14865;Dbxref=GenBank:WP_000367160.1;Name=WP_000367160.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416199.1;locus_tag=AC57_RS14865;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367160.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 8011 8199 . - . ID=gene-AC57_RS14860;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=AC57_RS14860;old_locus_tag=AC57_1837 NZ_JJLR01000068.1 Protein Homology CDS 8011 8199 . - 0 ID=cds-WP_001296104.1;Parent=gene-AC57_RS14860;Dbxref=GenBank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AC57_RS14860;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 8299 8709 . - . ID=gene-AC57_RS14855;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AC57_RS14855;old_locus_tag=AC57_1838 NZ_JJLR01000068.1 Protein Homology CDS 8299 8709 . - 0 ID=cds-WP_000637982.1;Parent=gene-AC57_RS14855;Dbxref=GenBank:WP_000637982.1;Name=WP_000637982.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AC57_RS14855;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637982.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 8706 11762 . - . ID=gene-AC57_RS14850;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AC57_RS14850;old_locus_tag=AC57_1839 NZ_JJLR01000068.1 Protein Homology CDS 8706 11762 . - 0 ID=cds-WP_000612891.1;Parent=gene-AC57_RS14850;Dbxref=GenBank:WP_000612891.1;Name=WP_000612891.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416202.1;locus_tag=AC57_RS14850;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_000612891.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 12151 13263 . + . ID=gene-AC57_RS14845;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AC57_RS14845;old_locus_tag=AC57_1840 NZ_JJLR01000068.1 Protein Homology CDS 12151 13263 . + 0 ID=cds-WP_000248636.1;Parent=gene-AC57_RS14845;Dbxref=GenBank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AC57_RS14845;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 13449 13556 . + . ID=gene-AC57_RS26180;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AC57_RS26180 NZ_JJLR01000068.1 cmsearch antisense_RNA 13449 13556 . + . ID=rna-AC57_RS26180;Parent=gene-AC57_RS26180;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26180;product=antisense sRNA RprA NZ_JJLR01000068.1 cmsearch exon 13449 13556 . + . ID=exon-AC57_RS26180-1;Parent=rna-AC57_RS26180;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26180;product=antisense sRNA RprA NZ_JJLR01000068.1 RefSeq gene 13692 14048 . + . ID=gene-AC57_RS14840;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AC57_RS14840;old_locus_tag=AC57_1841 NZ_JJLR01000068.1 Protein Homology CDS 13692 14048 . + 0 ID=cds-WP_001310864.1;Parent=gene-AC57_RS14840;Dbxref=GenBank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AC57_RS14840;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 14148 15362 . + . ID=gene-AC57_RS14835;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=AC57_RS14835;old_locus_tag=AC57_1842 NZ_JJLR01000068.1 Protein Homology CDS 14148 15362 . + 0 ID=cds-WP_032236906.1;Parent=gene-AC57_RS14835;Dbxref=GenBank:WP_032236906.1;Name=WP_032236906.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiM;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416205.1;locus_tag=AC57_RS14835;product=MFS transporter;protein_id=WP_032236906.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 15589 16854 . + . ID=gene-AC57_RS14830;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AC57_RS14830;old_locus_tag=AC57_1843 NZ_JJLR01000068.1 Protein Homology CDS 15589 16854 . + 0 ID=cds-WP_001297389.1;Parent=gene-AC57_RS14830;Dbxref=GenBank:WP_001297389.1;Name=WP_001297389.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC57_RS14830;product=MFS transporter;protein_id=WP_001297389.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 16866 17732 . + . ID=gene-AC57_RS14825;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC57_RS14825;old_locus_tag=AC57_1844 NZ_JJLR01000068.1 Protein Homology CDS 16866 17732 . + 0 ID=cds-WP_000383469.1;Parent=gene-AC57_RS14825;Dbxref=GenBank:WP_000383469.1;Name=WP_000383469.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC57_RS14825;product=quinate/shikimate dehydrogenase;protein_id=WP_000383469.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 17763 18521 . + . ID=gene-AC57_RS14820;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC57_RS14820;old_locus_tag=AC57_1845 NZ_JJLR01000068.1 Protein Homology CDS 17763 18521 . + 0 ID=cds-WP_000860163.1;Parent=gene-AC57_RS14820;Dbxref=GenBank:WP_000860163.1;Name=WP_000860163.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707592.1;locus_tag=AC57_RS14820;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860163.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 18666 20261 . + . ID=gene-AC57_RS14815;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=AC57_RS14815;old_locus_tag=AC57_1846 NZ_JJLR01000068.1 Protein Homology CDS 18666 20261 . + 0 ID=cds-WP_000805640.1;Parent=gene-AC57_RS14815;Dbxref=GenBank:WP_000805640.1;Name=WP_000805640.1;gbkey=CDS;gene=ydiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=AC57_RS14815;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_000805640.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 20275 21426 . + . ID=gene-AC57_RS14810;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AC57_RS14810;old_locus_tag=AC57_1847 NZ_JJLR01000068.1 Protein Homology CDS 20275 21426 . + 0 ID=cds-WP_000347850.1;Parent=gene-AC57_RS14810;Dbxref=GenBank:WP_000347850.1;Name=WP_000347850.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AC57_RS14810;product=acyl-CoA dehydrogenase;protein_id=WP_000347850.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 21469 22380 . - . ID=gene-AC57_RS14805;Name=ydiP;gbkey=Gene;gene=ydiP;gene_biotype=protein_coding;locus_tag=AC57_RS14805;old_locus_tag=AC57_1848 NZ_JJLR01000068.1 Protein Homology CDS 21469 22380 . - 0 ID=cds-WP_000284783.1;Parent=gene-AC57_RS14805;Dbxref=GenBank:WP_000284783.1;Name=WP_000284783.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ydiP;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310430.1;locus_tag=AC57_RS14805;product=AraC family transcriptional regulator;protein_id=WP_000284783.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 22696 23460 . + . ID=gene-AC57_RS14800;Name=ydiQ;gbkey=Gene;gene=ydiQ;gene_biotype=protein_coding;locus_tag=AC57_RS14800;old_locus_tag=AC57_1849 NZ_JJLR01000068.1 Protein Homology CDS 22696 23460 . + 0 ID=cds-WP_032236907.1;Parent=gene-AC57_RS14800;Dbxref=GenBank:WP_032236907.1;Name=WP_032236907.1;gbkey=CDS;gene=ydiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310431.1;locus_tag=AC57_RS14800;product=electron transfer flavoprotein;protein_id=WP_032236907.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 23480 24418 . + . ID=gene-AC57_RS14795;Name=ydiR;gbkey=Gene;gene=ydiR;gene_biotype=protein_coding;locus_tag=AC57_RS14795;old_locus_tag=AC57_1850 NZ_JJLR01000068.1 Protein Homology CDS 23480 24418 . + 0 ID=cds-WP_000080689.1;Parent=gene-AC57_RS14795;Dbxref=GenBank:WP_000080689.1;Name=WP_000080689.1;gbkey=CDS;gene=ydiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310432.1;locus_tag=AC57_RS14795;product=electron transfer flavoprotein subunit alpha;protein_id=WP_000080689.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 24474 25763 . + . ID=gene-AC57_RS14790;Name=ydiS;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=AC57_RS14790;old_locus_tag=AC57_1851 NZ_JJLR01000068.1 Protein Homology CDS 24474 25763 . + 0 ID=cds-WP_001278530.1;Parent=gene-AC57_RS14790;Dbxref=GenBank:WP_001278530.1;Name=WP_001278530.1;gbkey=CDS;gene=ydiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416214.1;locus_tag=AC57_RS14790;product=FAD-dependent oxidoreductase;protein_id=WP_001278530.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 25760 26053 . + . ID=gene-AC57_RS14785;Name=ydiT;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=AC57_RS14785;old_locus_tag=AC57_1852 NZ_JJLR01000068.1 Protein Homology CDS 25760 26053 . + 0 ID=cds-WP_000081084.1;Parent=gene-AC57_RS14785;Dbxref=GenBank:WP_000081084.1;Name=WP_000081084.1;gbkey=CDS;gene=ydiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310434.1;locus_tag=AC57_RS14785;product=ferredoxin family protein;protein_id=WP_000081084.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 26110 27756 . + . ID=gene-AC57_RS14780;Name=fadK;gbkey=Gene;gene=fadK;gene_biotype=protein_coding;locus_tag=AC57_RS14780;old_locus_tag=AC57_1853 NZ_JJLR01000068.1 Protein Homology CDS 26110 27756 . + 0 ID=cds-WP_001459793.1;Parent=gene-AC57_RS14780;Dbxref=GenBank:WP_001459793.1;Name=WP_001459793.1;gbkey=CDS;gene=fadK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AC57_RS14780;product=medium-chain fatty-acid--CoA ligase;protein_id=WP_001459793.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 27813 30191 . - . ID=gene-AC57_RS14775;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AC57_RS14775;old_locus_tag=AC57_1854 NZ_JJLR01000068.1 Protein Homology CDS 27813 30191 . - 0 ID=cds-WP_000069375.1;Parent=gene-AC57_RS14775;Dbxref=GenBank:WP_000069375.1;Name=WP_000069375.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AC57_RS14775;product=phosphoenolpyruvate synthase;protein_id=WP_000069375.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 30524 31357 . + . ID=gene-AC57_RS14765;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AC57_RS14765;old_locus_tag=AC57_1856 NZ_JJLR01000068.1 Protein Homology CDS 30524 31357 . + 0 ID=cds-WP_032236910.1;Parent=gene-AC57_RS14765;Dbxref=GenBank:WP_032236910.1;Name=WP_032236910.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AC57_RS14765;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_032236910.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 31514 32560 . + . ID=gene-AC57_RS14760;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AC57_RS14760;old_locus_tag=AC57_1857 NZ_JJLR01000068.1 Protein Homology CDS 31514 32560 . + 0 ID=cds-WP_023281270.1;Parent=gene-AC57_RS14760;Dbxref=GenBank:WP_023281270.1;Name=WP_023281270.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310438.1;locus_tag=AC57_RS14760;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_023281270.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 32692 32883 . + . ID=gene-AC57_RS14755;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AC57_RS14755;old_locus_tag=AC57_1858 NZ_JJLR01000068.1 Protein Homology CDS 32692 32883 . + 0 ID=cds-WP_001270810.1;Parent=gene-AC57_RS14755;Dbxref=GenBank:WP_001270810.1;Name=WP_001270810.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AC57_RS14755;product=hemin uptake protein HemP;protein_id=WP_001270810.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 32887 34323 . - . ID=gene-AC57_RS14750;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AC57_RS14750;old_locus_tag=AC57_1859 NZ_JJLR01000068.1 Protein Homology CDS 32887 34323 . - 0 ID=cds-WP_023281271.1;Parent=gene-AC57_RS14750;Dbxref=GenBank:WP_023281271.1;Name=WP_023281271.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310440.1;locus_tag=AC57_RS14750;product=protein adenylyltransferase SelO;protein_id=WP_023281271.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 34386 35099 . - . ID=gene-AC57_RS14745;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AC57_RS14745;old_locus_tag=AC57_1860 NZ_JJLR01000068.1 Protein Homology CDS 34386 35099 . - 0 ID=cds-WP_023281272.1;Parent=gene-AC57_RS14745;Dbxref=GenBank:WP_023281272.1;Name=WP_023281272.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310441.1;locus_tag=AC57_RS14745;product=anti-FlhDC factor;protein_id=WP_023281272.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 35346 35810 . - . ID=gene-AC57_RS14740;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AC57_RS14740;old_locus_tag=AC57_1861 NZ_JJLR01000068.1 Protein Homology CDS 35346 35810 . - 0 ID=cds-WP_001209785.1;Parent=gene-AC57_RS14740;Dbxref=GenBank:WP_001209785.1;Name=WP_001209785.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=nlpC;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310442.1;locus_tag=AC57_RS14740;product=C40 family peptidase;protein_id=WP_001209785.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 35888 36637 . - . ID=gene-AC57_RS14735;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AC57_RS14735;old_locus_tag=AC57_1862 NZ_JJLR01000068.1 Protein Homology CDS 35888 36637 . - 0 ID=cds-WP_000029466.1;Parent=gene-AC57_RS14735;Dbxref=GenBank:WP_000029466.1;Name=WP_000029466.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AC57_RS14735;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_000029466.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 36637 37188 . - . ID=gene-AC57_RS14730;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AC57_RS14730;old_locus_tag=AC57_1863 NZ_JJLR01000068.1 Protein Homology CDS 36637 37188 . - 0 ID=cds-WP_001154187.1;Parent=gene-AC57_RS14730;Dbxref=GenBank:WP_001154187.1;Name=WP_001154187.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310444.1;locus_tag=AC57_RS14730;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154187.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 37251 38231 . - . ID=gene-AC57_RS14725;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AC57_RS14725;old_locus_tag=AC57_1864 NZ_JJLR01000068.1 Protein Homology CDS 37251 38231 . - 0 ID=cds-WP_000956528.1;Parent=gene-AC57_RS14725;Dbxref=GenBank:WP_000956528.1;Name=WP_000956528.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AC57_RS14725;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956528.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 38332 38631 . - . ID=gene-AC57_RS14720;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AC57_RS14720;old_locus_tag=AC57_1865 NZ_JJLR01000068.1 Protein Homology CDS 38332 38631 . - 0 ID=cds-WP_001229265.1;Parent=gene-AC57_RS14720;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AC57_RS14720;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 38636 41023 . - . ID=gene-AC57_RS14715;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AC57_RS14715;old_locus_tag=AC57_1866 NZ_JJLR01000068.1 Protein Homology CDS 38636 41023 . - 0 ID=cds-WP_023281273.1;Parent=gene-AC57_RS14715;Dbxref=GenBank:WP_023281273.1;Name=WP_023281273.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=AC57_RS14715;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_023281273.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 41038 42021 . - . ID=gene-AC57_RS14710;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AC57_RS14710;old_locus_tag=AC57_1867 NZ_JJLR01000068.1 Protein Homology CDS 41038 42021 . - 0 ID=cds-WP_000018588.1;Parent=gene-AC57_RS14710;Dbxref=GenBank:WP_000018588.1;Name=WP_000018588.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AC57_RS14710;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018588.1;transl_table=11 NZ_JJLR01000068.1 cmsearch sequence_feature 42231 42355 . - . ID=id-NZ_JJLR01000068.1:42231..42355;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLR01000068.1 RefSeq gene 42305 42349 . - . ID=gene-AC57_RS29795;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AC57_RS29795 NZ_JJLR01000068.1 Protein Homology CDS 42305 42349 . - 0 ID=cds-WP_001386830.1;Parent=gene-AC57_RS29795;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AC57_RS29795;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 42472 42828 . - . ID=gene-AC57_RS14705;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AC57_RS14705;old_locus_tag=AC57_1868 NZ_JJLR01000068.1 Protein Homology CDS 42472 42828 . - 0 ID=cds-WP_000124850.1;Parent=gene-AC57_RS14705;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AC57_RS14705;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 42881 43078 . - . ID=gene-AC57_RS14700;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AC57_RS14700;old_locus_tag=AC57_1869 NZ_JJLR01000068.1 Protein Homology CDS 42881 43078 . - 0 ID=cds-WP_001124225.1;Parent=gene-AC57_RS14700;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AC57_RS14700;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 43175 43717 . - . ID=gene-AC57_RS0124120;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AC57_RS0124120 NZ_JJLR01000068.1 Protein Homology CDS 43175 43717 . - 0 ID=cds-WP_001700733.1;Parent=gene-AC57_RS0124120;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AC57_RS0124120;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 43721 45649 . - . ID=gene-AC57_RS14695;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AC57_RS14695;old_locus_tag=AC57_1871 NZ_JJLR01000068.1 Protein Homology CDS 43721 45649 . - 0 ID=cds-WP_032236914.1;Parent=gene-AC57_RS14695;Dbxref=GenBank:WP_032236914.1;Name=WP_032236914.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AC57_RS14695;product=threonine--tRNA ligase;protein_id=WP_032236914.1;transl_table=11 NZ_JJLR01000068.1 RefSeq pseudogene 46173 48073 . + . ID=gene-AC57_RS0124125;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=pseudogene;locus_tag=AC57_RS0124125;old_locus_tag=AC57_1873;pseudo=true NZ_JJLR01000068.1 Protein Homology CDS 46173 48073 . + 0 ID=cds-AC57_RS0124125;Parent=gene-AC57_RS0124125;Note=frameshifted;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AC57_RS0124125;product=type III secretion system effector EspL1;pseudo=true;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 48244 48351 . + . ID=gene-AC57_RS14690;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AC57_RS14690;old_locus_tag=AC57_1875 NZ_JJLR01000068.1 Protein Homology CDS 48244 48351 . + 0 ID=cds-WP_001142445.1;Parent=gene-AC57_RS14690;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AC57_RS14690;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 48404 49162 . - . ID=gene-AC57_RS14685;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AC57_RS14685;old_locus_tag=AC57_1876 NZ_JJLR01000068.1 Protein Homology CDS 48404 49162 . - 0 ID=cds-WP_000771396.1;Parent=gene-AC57_RS14685;Dbxref=GenBank:WP_000771396.1;Name=WP_000771396.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=AC57_RS14685;product=DUF481 domain-containing protein;protein_id=WP_000771396.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 49449 50378 . + . ID=gene-AC57_RS14680;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AC57_RS14680;old_locus_tag=AC57_1877 NZ_JJLR01000068.1 Protein Homology CDS 49449 50378 . + 0 ID=cds-WP_000251723.1;Parent=gene-AC57_RS14680;Dbxref=GenBank:WP_000251723.1;Name=WP_000251723.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416237.3;locus_tag=AC57_RS14680;product=6-phosphofructokinase II;protein_id=WP_000251723.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 50479 50769 . + . ID=gene-AC57_RS14675;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AC57_RS14675;old_locus_tag=AC57_1878 NZ_JJLR01000068.1 Protein Homology CDS 50479 50769 . + 0 ID=cds-WP_000146159.1;Parent=gene-AC57_RS14675;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AC57_RS14675;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 50875 51735 . + . ID=gene-AC57_RS14670;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AC57_RS14670;old_locus_tag=AC57_1879 NZ_JJLR01000068.1 Protein Homology CDS 50875 51735 . + 0 ID=cds-WP_000267657.1;Parent=gene-AC57_RS14670;Dbxref=GenBank:WP_000267657.1;Name=WP_000267657.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310458.1;locus_tag=AC57_RS14670;product=fructosamine kinase family protein;protein_id=WP_000267657.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 51776 52312 . - . ID=gene-AC57_RS14665;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AC57_RS14665;old_locus_tag=AC57_1880 NZ_JJLR01000068.1 Protein Homology CDS 51776 52312 . - 0 ID=cds-WP_000222172.1;Parent=gene-AC57_RS14665;Dbxref=GenBank:WP_000222172.1;Name=WP_000222172.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AC57_RS14665;product=YniB family protein;protein_id=WP_000222172.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 52459 53127 . + . ID=gene-AC57_RS14660;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AC57_RS14660;old_locus_tag=AC57_1881 NZ_JJLR01000068.1 Protein Homology CDS 52459 53127 . + 0 ID=cds-WP_000106833.1;Parent=gene-AC57_RS14660;Dbxref=GenBank:WP_000106833.1;Name=WP_000106833.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416241.1;locus_tag=AC57_RS14660;product=hexitol phosphatase HxpB;protein_id=WP_000106833.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 53290 53880 . + . ID=gene-AC57_RS14655;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AC57_RS14655;old_locus_tag=AC57_1882 NZ_JJLR01000068.1 Protein Homology CDS 53290 53880 . + 0 ID=cds-WP_001295408.1;Parent=gene-AC57_RS14655;Dbxref=GenBank:WP_001295408.1;Name=WP_001295408.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310461.2;locus_tag=AC57_RS14655;product=metal-dependent hydrolase;protein_id=WP_001295408.1;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 54013 55404 . + . ID=gene-AC57_RS14650;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AC57_RS14650;old_locus_tag=AC57_1883 NZ_JJLR01000068.1 Protein Homology CDS 54013 55404 . + 0 ID=cds-WP_001010706.1;Parent=gene-AC57_RS14650;Dbxref=GenBank:WP_001010706.1;Name=WP_001010706.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310462.1;locus_tag=AC57_RS14650;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010706.1;transl_table=11 NZ_JJLR01000068.1 RefSeq pseudogene 55429 55782 . - . ID=gene-AC57_RS0124130;Name=ydjO;end_range=55782,.;gbkey=Gene;gene=ydjO;gene_biotype=pseudogene;locus_tag=AC57_RS0124130;partial=true;pseudo=true NZ_JJLR01000068.1 Protein Homology CDS 55429 55782 . - 0 ID=cds-AC57_RS0124130;Parent=gene-AC57_RS0124130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=55782,.;gbkey=CDS;gene=ydjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AC57_RS0124130;partial=true;product=protein YdjO;pseudo=true;transl_table=11 NZ_JJLR01000068.1 RefSeq gene 55799 56075 . - . ID=gene-AC57_RS27085;Name=AC57_RS27085;end_range=56075,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27085;old_locus_tag=AC57_1884;partial=true NZ_JJLR01000068.1 Protein Homology CDS 55799 56075 . - 1 ID=cds-WP_000364013.1;Parent=gene-AC57_RS27085;Dbxref=GenBank:WP_000364013.1;Name=WP_000364013.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=56075,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27085;partial=true;product=IS1 family transposase;protein_id=WP_000364013.1;transl_table=11 ##sequence-region NZ_JJLR01000069.1 1 31970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000069.1 RefSeq region 1 31970 . + . ID=NZ_JJLR01000069.1:1..31970;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000069.1 RefSeq pseudogene 1 289 . - . ID=gene-AC57_RS14640;Name=AC57_RS14640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14640;old_locus_tag=AC57_1885;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000069.1 Protein Homology CDS 1 289 . - 0 ID=cds-AC57_RS14640;Parent=gene-AC57_RS14640;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS14640;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000069.1 RefSeq pseudogene 332 781 . - . ID=gene-AC57_RS14635;Name=AC57_RS14635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14635;old_locus_tag=AC57_1886;partial=true;pseudo=true;start_range=.,332 NZ_JJLR01000069.1 Protein Homology CDS 332 781 . - 0 ID=cds-AC57_RS14635;Parent=gene-AC57_RS14635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AC57_RS14635;partial=true;product=protein YdjO;pseudo=true;start_range=.,332;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 1070 1333 . - . ID=gene-AC57_RS14630;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AC57_RS14630;old_locus_tag=AC57_1887 NZ_JJLR01000069.1 Protein Homology CDS 1070 1333 . - 0 ID=cds-WP_001241561.1;Parent=gene-AC57_RS14630;Dbxref=GenBank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AC57_RS14630;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 1516 3777 . + . ID=gene-AC57_RS14625;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AC57_RS14625;old_locus_tag=AC57_1888 NZ_JJLR01000069.1 Protein Homology CDS 1516 3777 . + 0 ID=cds-WP_000077856.1;Parent=gene-AC57_RS14625;Dbxref=GenBank:WP_000077856.1;Name=WP_000077856.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025308.1;locus_tag=AC57_RS14625;product=catalase HPII;protein_id=WP_000077856.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 4035 4784 . - . ID=gene-AC57_RS14620;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AC57_RS14620;old_locus_tag=AC57_1889 NZ_JJLR01000069.1 Protein Homology CDS 4035 4784 . - 0 ID=cds-WP_000440458.1;Parent=gene-AC57_RS14620;Dbxref=GenBank:WP_000440458.1;Name=WP_000440458.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416247.1;locus_tag=AC57_RS14620;product=chitin disaccharide deacetylase;protein_id=WP_000440458.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 4797 6149 . - . ID=gene-AC57_RS14615;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AC57_RS14615;old_locus_tag=AC57_1890 NZ_JJLR01000069.1 Protein Homology CDS 4797 6149 . - 0 ID=cds-WP_000078744.1;Parent=gene-AC57_RS14615;Dbxref=GenBank:WP_000078744.1;Name=WP_000078744.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310467.1;locus_tag=AC57_RS14615;product=6-phospho-beta-glucosidase;protein_id=WP_000078744.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 6254 7096 . - . ID=gene-AC57_RS14610;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AC57_RS14610;old_locus_tag=AC57_1891 NZ_JJLR01000069.1 Protein Homology CDS 6254 7096 . - 0 ID=cds-WP_000983653.1;Parent=gene-AC57_RS14610;Dbxref=GenBank:WP_000983653.1;Name=WP_000983653.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AC57_RS14610;product=transcriptional regulator ChbR;protein_id=WP_000983653.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 7104 7454 . - . ID=gene-AC57_RS14605;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AC57_RS14605;old_locus_tag=AC57_1892 NZ_JJLR01000069.1 Protein Homology CDS 7104 7454 . - 0 ID=cds-WP_000968919.1;Parent=gene-AC57_RS14605;Dbxref=GenBank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AC57_RS14605;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 7505 8863 . - . ID=gene-AC57_RS14600;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AC57_RS14600;old_locus_tag=AC57_1893 NZ_JJLR01000069.1 Protein Homology CDS 7505 8863 . - 0 ID=cds-WP_000073041.1;Parent=gene-AC57_RS14600;Dbxref=GenBank:WP_000073041.1;Name=WP_000073041.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AC57_RS14600;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073041.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 8948 9268 . - . ID=gene-AC57_RS14595;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AC57_RS14595;old_locus_tag=AC57_1894 NZ_JJLR01000069.1 Protein Homology CDS 8948 9268 . - 0 ID=cds-WP_000412169.1;Parent=gene-AC57_RS14595;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AC57_RS14595;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 9567 9905 . - . ID=gene-AC57_RS14590;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AC57_RS14590;old_locus_tag=AC57_1895 NZ_JJLR01000069.1 Protein Homology CDS 9567 9905 . - 0 ID=cds-WP_001039044.1;Parent=gene-AC57_RS14590;Dbxref=GenBank:WP_001039044.1;Name=WP_001039044.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AC57_RS14590;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_001039044.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 10107 10934 . + . ID=gene-AC57_RS14585;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AC57_RS14585;old_locus_tag=AC57_1896 NZ_JJLR01000069.1 Protein Homology CDS 10107 10934 . + 0 ID=cds-WP_000175026.1;Parent=gene-AC57_RS14585;Dbxref=GenBank:WP_000175026.1;Name=WP_000175026.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416254.1;locus_tag=AC57_RS14585;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175026.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 11164 12051 . + . ID=gene-AC57_RS14580;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AC57_RS14580;old_locus_tag=AC57_1897 NZ_JJLR01000069.1 Protein Homology CDS 11164 12051 . + 0 ID=cds-WP_000252397.1;Parent=gene-AC57_RS14580;Dbxref=GenBank:WP_000252397.1;Name=WP_000252397.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416255.1;locus_tag=AC57_RS14580;product=excinuclease Cho;protein_id=WP_000252397.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 12011 12586 . - . ID=gene-AC57_RS14575;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AC57_RS14575;old_locus_tag=AC57_1898 NZ_JJLR01000069.1 Protein Homology CDS 12011 12586 . - 0 ID=cds-WP_001300480.1;Parent=gene-AC57_RS14575;Dbxref=GenBank:WP_001300480.1;Name=WP_001300480.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416256.2;locus_tag=AC57_RS14575;product=environmental stress-induced protein Ves;protein_id=WP_001300480.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 12789 13274 . - . ID=gene-AC57_RS14570;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AC57_RS14570;old_locus_tag=AC57_1899 NZ_JJLR01000069.1 Protein Homology CDS 12789 13274 . - 0 ID=cds-WP_001228984.1;Parent=gene-AC57_RS14570;Dbxref=GenBank:WP_001228984.1;Name=WP_001228984.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416257.1;locus_tag=AC57_RS14570;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228984.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 13604 14572 . - . ID=gene-AC57_RS14565;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AC57_RS14565;old_locus_tag=AC57_1900 NZ_JJLR01000069.1 Protein Homology CDS 13604 14572 . - 0 ID=cds-WP_000368506.1;Parent=gene-AC57_RS14565;Dbxref=GenBank:WP_000368506.1;Name=WP_000368506.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416258.1;locus_tag=AC57_RS14565;product=succinylglutamate desuccinylase;protein_id=WP_000368506.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 14565 15908 . - . ID=gene-AC57_RS14560;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AC57_RS14560;old_locus_tag=AC57_1901 NZ_JJLR01000069.1 Protein Homology CDS 14565 15908 . - 0 ID=cds-WP_032246191.1;Parent=gene-AC57_RS14560;Dbxref=GenBank:WP_032246191.1;Name=WP_032246191.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416259.1;locus_tag=AC57_RS14560;product=N-succinylarginine dihydrolase;protein_id=WP_032246191.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 15905 17383 . - . ID=gene-AC57_RS14555;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AC57_RS14555;old_locus_tag=AC57_1902 NZ_JJLR01000069.1 Protein Homology CDS 15905 17383 . - 0 ID=cds-WP_032256157.1;Parent=gene-AC57_RS14555;Dbxref=GenBank:WP_032256157.1;Name=WP_032256157.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416260.1;locus_tag=AC57_RS14555;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_032256157.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 17380 18414 . - . ID=gene-AC57_RS14550;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AC57_RS14550;old_locus_tag=AC57_1903 NZ_JJLR01000069.1 Protein Homology CDS 17380 18414 . - 0 ID=cds-WP_001723562.1;Parent=gene-AC57_RS14550;Dbxref=GenBank:WP_001723562.1;Name=WP_001723562.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AC57_RS14550;product=arginine N-succinyltransferase;protein_id=WP_001723562.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 18411 19631 . - . ID=gene-AC57_RS14545;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AC57_RS14545;old_locus_tag=AC57_1904 NZ_JJLR01000069.1 Protein Homology CDS 18411 19631 . - 0 ID=cds-WP_000081986.1;Parent=gene-AC57_RS14545;Dbxref=GenBank:WP_000081986.1;Name=WP_000081986.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416262.1;locus_tag=AC57_RS14545;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000081986.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 20077 20883 . + . ID=gene-AC57_RS14540;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AC57_RS14540;old_locus_tag=AC57_1906 NZ_JJLR01000069.1 Protein Homology CDS 20077 20883 . + 0 ID=cds-WP_032285695.1;Parent=gene-AC57_RS14540;Dbxref=GenBank:WP_032285695.1;Name=WP_032285695.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416263.1;locus_tag=AC57_RS14540;product=exodeoxyribonuclease III;protein_id=WP_032285695.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 21050 21760 . + . ID=gene-AC57_RS14535;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=AC57_RS14535;old_locus_tag=AC57_1907 NZ_JJLR01000069.1 Protein Homology CDS 21050 21760 . + 0 ID=cds-WP_001366347.1;Parent=gene-AC57_RS14535;Dbxref=GenBank:WP_001366347.1;Name=WP_001366347.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416264.4;locus_tag=AC57_RS14535;product=TVP38/TMEM64 family protein;protein_id=WP_001366347.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 21765 22442 . + . ID=gene-AC57_RS14530;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AC57_RS14530;old_locus_tag=AC57_1908 NZ_JJLR01000069.1 Protein Homology CDS 21765 22442 . + 0 ID=cds-WP_000077941.1;Parent=gene-AC57_RS14530;Dbxref=GenBank:WP_000077941.1;Name=WP_000077941.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AC57_RS14530;product=lipoprotein YdjY;protein_id=WP_000077941.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 22456 23163 . + . ID=gene-AC57_RS14525;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=AC57_RS14525;old_locus_tag=AC57_1909 NZ_JJLR01000069.1 Protein Homology CDS 22456 23163 . + 0 ID=cds-WP_032236919.1;Parent=gene-AC57_RS14525;Dbxref=GenBank:WP_032236919.1;Name=WP_032236919.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjZ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697152.1;locus_tag=AC57_RS14525;product=TVP38/TMEM64 family protein;protein_id=WP_032236919.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 23163 23711 . + . ID=gene-AC57_RS14520;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=AC57_RS14520;old_locus_tag=AC57_1910 NZ_JJLR01000069.1 Protein Homology CDS 23163 23711 . + 0 ID=cds-WP_000524080.1;Parent=gene-AC57_RS14520;Dbxref=GenBank:WP_000524080.1;Name=WP_000524080.1;Ontology_term=GO:0051920;gbkey=CDS;gene=ynjA;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310486.1;locus_tag=AC57_RS14520;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000524080.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 23721 24887 . + . ID=gene-AC57_RS14515;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=AC57_RS14515;old_locus_tag=AC57_1911 NZ_JJLR01000069.1 Protein Homology CDS 23721 24887 . + 0 ID=cds-WP_032236920.1;Parent=gene-AC57_RS14515;Dbxref=GenBank:WP_032236920.1;Name=WP_032236920.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AC57_RS14515;product=ABC transporter substrate-binding protein;protein_id=WP_032236920.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 24860 26395 . + . ID=gene-AC57_RS14510;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=AC57_RS14510;old_locus_tag=AC57_1912 NZ_JJLR01000069.1 Protein Homology CDS 24860 26395 . + 0 ID=cds-WP_001362694.1;Parent=gene-AC57_RS14510;Dbxref=GenBank:WP_001362694.1;Name=WP_001362694.1;gbkey=CDS;gene=ynjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416269.4;locus_tag=AC57_RS14510;product=ABC transporter permease;protein_id=WP_001362694.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 26395 27048 . + . ID=gene-AC57_RS14505;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=AC57_RS14505;old_locus_tag=AC57_1913 NZ_JJLR01000069.1 Protein Homology CDS 26395 27048 . + 0 ID=cds-WP_032236921.1;Parent=gene-AC57_RS14505;Dbxref=GenBank:WP_032236921.1;Name=WP_032236921.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707358.2;locus_tag=AC57_RS14505;product=ATP-binding cassette domain-containing protein;protein_id=WP_032236921.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 27115 28422 . + . ID=gene-AC57_RS14500;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AC57_RS14500;old_locus_tag=AC57_1914 NZ_JJLR01000069.1 Protein Homology CDS 27115 28422 . + 0 ID=cds-WP_001297658.1;Parent=gene-AC57_RS14500;Dbxref=GenBank:WP_001297658.1;Name=WP_001297658.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=AC57_RS14500;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_001297658.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 28431 29051 . - . ID=gene-AC57_RS14495;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=AC57_RS14495;old_locus_tag=AC57_1915 NZ_JJLR01000069.1 Protein Homology CDS 28431 29051 . - 0 ID=cds-WP_001295484.1;Parent=gene-AC57_RS14495;Dbxref=GenBank:WP_001295484.1;Name=WP_001295484.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynjF;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416272.2;locus_tag=AC57_RS14495;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001295484.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 29138 29545 . + . ID=gene-AC57_RS14490;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AC57_RS14490;old_locus_tag=AC57_1916 NZ_JJLR01000069.1 Protein Homology CDS 29138 29545 . + 0 ID=cds-WP_032279882.1;Parent=gene-AC57_RS14490;Dbxref=GenBank:WP_032279882.1;Name=WP_032279882.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416273.1;locus_tag=AC57_RS14490;product=CTP pyrophosphohydrolase;protein_id=WP_032279882.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 29511 29783 . - . ID=gene-AC57_RS14485;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=AC57_RS14485;old_locus_tag=AC57_1917 NZ_JJLR01000069.1 Protein Homology CDS 29511 29783 . - 0 ID=cds-WP_000085240.1;Parent=gene-AC57_RS14485;Dbxref=GenBank:WP_000085240.1;Name=WP_000085240.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AC57_RS14485;product=YnjH family protein;protein_id=WP_000085240.1;transl_table=11 NZ_JJLR01000069.1 RefSeq gene 30019 31362 . + . ID=gene-AC57_RS14480;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AC57_RS14480;old_locus_tag=AC57_1918 NZ_JJLR01000069.1 Protein Homology CDS 30019 31362 . + 0 ID=cds-WP_032279881.1;Parent=gene-AC57_RS14480;Dbxref=GenBank:WP_032279881.1;Name=WP_032279881.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310494.1;locus_tag=AC57_RS14480;product=NADP-specific glutamate dehydrogenase;protein_id=WP_032279881.1;transl_table=11 NZ_JJLR01000069.1 RefSeq pseudogene 31479 31643 . - . ID=gene-AC57_RS30725;Name=AC57_RS30725;end_range=31643,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30725;partial=true;pseudo=true NZ_JJLR01000069.1 Protein Homology CDS 31479 31643 . - 0 ID=cds-AC57_RS30725;Parent=gene-AC57_RS30725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=31643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310495.1;locus_tag=AC57_RS30725;partial=true;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000069.1 RefSeq pseudogene 31659 31970 . - . ID=gene-AC57_RS14475;Name=AC57_RS14475;end_range=31970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14475;old_locus_tag=AC57_1919;partial=true;pseudo=true NZ_JJLR01000069.1 Protein Homology CDS 31659 31970 . - 0 ID=cds-AC57_RS14475;Parent=gene-AC57_RS14475;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=31970,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS14475;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000070.1 1 29522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000070.1 RefSeq region 1 29522 . + . ID=NZ_JJLR01000070.1:1..29522;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000070.1 RefSeq pseudogene 1 506 . - . ID=gene-AC57_RS28955;Name=AC57_RS28955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28955;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000070.1 Protein Homology CDS 1 506 . - 0 ID=cds-AC57_RS28955;Parent=gene-AC57_RS28955;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=AC57_RS28955;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 540 1445 . - . ID=gene-AC57_RS14465;Name=AC57_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14465;old_locus_tag=AC57_1921 NZ_JJLR01000070.1 Protein Homology CDS 540 1445 . - 0 ID=cds-WP_050440075.1;Parent=gene-AC57_RS14465;Dbxref=GenBank:WP_050440075.1;Name=WP_050440075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AC57_RS14465;product=DUF1266 domain-containing protein;protein_id=WP_050440075.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 1573 3534 . - . ID=gene-AC57_RS14460;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AC57_RS14460;old_locus_tag=AC57_1922 NZ_JJLR01000070.1 Protein Homology CDS 1573 3534 . - 0 ID=cds-WP_032236924.1;Parent=gene-AC57_RS14460;Dbxref=GenBank:WP_032236924.1;Name=WP_032236924.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001235843.1;locus_tag=AC57_RS14460;product=DNA topoisomerase III;protein_id=WP_032236924.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 3539 4582 . - . ID=gene-AC57_RS14455;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AC57_RS14455;old_locus_tag=AC57_1923 NZ_JJLR01000070.1 Protein Homology CDS 3539 4582 . - 0 ID=cds-WP_032236925.1;Parent=gene-AC57_RS14455;Dbxref=GenBank:WP_032236925.1;Name=WP_032236925.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293899.1;locus_tag=AC57_RS14455;product=selenide%2C water dikinase SelD;protein_id=WP_032236925.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 4699 5250 . - . ID=gene-AC57_RS14450;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AC57_RS14450;old_locus_tag=AC57_1924 NZ_JJLR01000070.1 Protein Homology CDS 4699 5250 . - 0 ID=cds-WP_000339283.1;Parent=gene-AC57_RS14450;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AC57_RS14450;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 5411 7267 . + . ID=gene-AC57_RS14445;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AC57_RS14445;old_locus_tag=AC57_1925 NZ_JJLR01000070.1 Protein Homology CDS 5411 7267 . + 0 ID=cds-WP_032246195.1;Parent=gene-AC57_RS14445;Dbxref=GenBank:WP_032246195.1;Name=WP_032246195.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416280.1;locus_tag=AC57_RS14445;product=signal peptide peptidase SppA;protein_id=WP_032246195.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 7434 8450 . + . ID=gene-AC57_RS14440;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AC57_RS14440;old_locus_tag=AC57_1926 NZ_JJLR01000070.1 Protein Homology CDS 7434 8450 . + 0 ID=cds-WP_001170162.1;Parent=gene-AC57_RS14440;Dbxref=GenBank:WP_001170162.1;Name=WP_001170162.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AC57_RS14440;product=asparaginase;protein_id=WP_001170162.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 8461 9102 . + . ID=gene-AC57_RS14435;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AC57_RS14435;old_locus_tag=AC57_1927 NZ_JJLR01000070.1 Protein Homology CDS 8461 9102 . + 0 ID=cds-WP_001135066.1;Parent=gene-AC57_RS14435;Dbxref=GenBank:WP_001135066.1;Name=WP_001135066.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416282.4;locus_tag=AC57_RS14435;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_001135066.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 9195 10553 . - . ID=gene-AC57_RS14430;Name=ydjE;gbkey=Gene;gene=ydjE;gene_biotype=protein_coding;locus_tag=AC57_RS14430;old_locus_tag=AC57_1928 NZ_JJLR01000070.1 Protein Homology CDS 9195 10553 . - 0 ID=cds-WP_000438807.1;Parent=gene-AC57_RS14430;Dbxref=GenBank:WP_000438807.1;Name=WP_000438807.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416283.1;locus_tag=AC57_RS14430;product=MFS transporter;protein_id=WP_000438807.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 10670 11428 . - . ID=gene-AC57_RS14425;Name=ydjF;gbkey=Gene;gene=ydjF;gene_biotype=protein_coding;locus_tag=AC57_RS14425;old_locus_tag=AC57_1929 NZ_JJLR01000070.1 Protein Homology CDS 10670 11428 . - 0 ID=cds-WP_032236929.1;Parent=gene-AC57_RS14425;Dbxref=GenBank:WP_032236929.1;Name=WP_032236929.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ydjF;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=AC57_RS14425;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_032236929.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 11565 12545 . - . ID=gene-AC57_RS14420;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=AC57_RS14420;old_locus_tag=AC57_1930 NZ_JJLR01000070.1 Protein Homology CDS 11565 12545 . - 0 ID=cds-WP_032236930.1;Parent=gene-AC57_RS14420;Dbxref=GenBank:WP_032236930.1;Name=WP_032236930.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416285.1;locus_tag=AC57_RS14420;product=NADH-dependent methylglyoxal reductase;protein_id=WP_032236930.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 12555 13502 . - . ID=gene-AC57_RS14415;Name=ydjH;gbkey=Gene;gene=ydjH;gene_biotype=protein_coding;locus_tag=AC57_RS14415;old_locus_tag=AC57_1931 NZ_JJLR01000070.1 Protein Homology CDS 12555 13502 . - 0 ID=cds-WP_001299568.1;Parent=gene-AC57_RS14415;Dbxref=GenBank:WP_001299568.1;Name=WP_001299568.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;gene=ydjH;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=AC57_RS14415;product=sugar kinase;protein_id=WP_001299568.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 13507 14343 . - . ID=gene-AC57_RS14410;Name=ydjI;gbkey=Gene;gene=ydjI;gene_biotype=protein_coding;locus_tag=AC57_RS14410;old_locus_tag=AC57_1932 NZ_JJLR01000070.1 Protein Homology CDS 13507 14343 . - 0 ID=cds-WP_000878895.1;Parent=gene-AC57_RS14410;Dbxref=GenBank:WP_000878895.1;Name=WP_000878895.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=ydjI;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416287.1;locus_tag=AC57_RS14410;product=ketose-bisphosphate aldolase;protein_id=WP_000878895.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 14364 15407 . - . ID=gene-AC57_RS14405;Name=ydjJ;gbkey=Gene;gene=ydjJ;gene_biotype=protein_coding;locus_tag=AC57_RS14405;old_locus_tag=AC57_1933 NZ_JJLR01000070.1 Protein Homology CDS 14364 15407 . - 0 ID=cds-WP_032279897.1;Parent=gene-AC57_RS14405;Dbxref=GenBank:WP_032279897.1;Name=WP_032279897.1;gbkey=CDS;gene=ydjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=AC57_RS14405;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_032279897.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 15424 16803 . - . ID=gene-AC57_RS14400;Name=ydjK;gbkey=Gene;gene=ydjK;gene_biotype=protein_coding;locus_tag=AC57_RS14400;old_locus_tag=AC57_1934 NZ_JJLR01000070.1 Protein Homology CDS 15424 16803 . - 0 ID=cds-WP_000435280.1;Parent=gene-AC57_RS14400;Dbxref=GenBank:WP_000435280.1;Name=WP_000435280.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=AC57_RS14400;product=MFS transporter;protein_id=WP_000435280.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 16830 17906 . - . ID=gene-AC57_RS14395;Name=ydjL;gbkey=Gene;gene=ydjL;gene_biotype=protein_coding;locus_tag=AC57_RS14395;old_locus_tag=AC57_1935 NZ_JJLR01000070.1 Protein Homology CDS 16830 17906 . - 0 ID=cds-WP_000645221.1;Parent=gene-AC57_RS14395;Dbxref=GenBank:WP_000645221.1;Name=WP_000645221.1;gbkey=CDS;gene=ydjL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416290.1;locus_tag=AC57_RS14395;product=zinc-binding dehydrogenase;protein_id=WP_000645221.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 18276 18548 . - . ID=gene-AC57_RS14390;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AC57_RS14390;old_locus_tag=AC57_1936 NZ_JJLR01000070.1 Protein Homology CDS 18276 18548 . - 0 ID=cds-WP_001299575.1;Parent=gene-AC57_RS14390;Dbxref=GenBank:WP_001299575.1;Name=WP_001299575.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707337.2;locus_tag=AC57_RS14390;product=YeaC family protein;protein_id=WP_001299575.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 18590 19003 . - . ID=gene-AC57_RS14385;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AC57_RS14385;old_locus_tag=AC57_1937 NZ_JJLR01000070.1 Protein Homology CDS 18590 19003 . - 0 ID=cds-WP_001284618.1;Parent=gene-AC57_RS14385;Dbxref=GenBank:WP_001284618.1;Name=WP_001284618.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=AC57_RS14385;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 19345 20340 . + . ID=gene-AC57_RS14380;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AC57_RS14380;old_locus_tag=AC57_1938 NZ_JJLR01000070.1 Protein Homology CDS 19345 20340 . + 0 ID=cds-WP_000153502.1;Parent=gene-AC57_RS14380;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AC57_RS14380;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 20424 21308 . + . ID=gene-AC57_RS14375;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AC57_RS14375;old_locus_tag=AC57_1939 NZ_JJLR01000070.1 Protein Homology CDS 20424 21308 . + 0 ID=cds-WP_032236932.1;Parent=gene-AC57_RS14375;Dbxref=GenBank:WP_032236932.1;Name=WP_032236932.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416294.4;locus_tag=AC57_RS14375;product=D-hexose-6-phosphate mutarotase;protein_id=WP_032236932.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 21356 22210 . - . ID=gene-AC57_RS14370;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AC57_RS14370;old_locus_tag=AC57_1940 NZ_JJLR01000070.1 Protein Homology CDS 21356 22210 . - 0 ID=cds-WP_001186374.1;Parent=gene-AC57_RS14370;Dbxref=GenBank:WP_001186374.1;Name=WP_001186374.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416295.1;locus_tag=AC57_RS14370;product=methylglyoxal reductase YeaE;protein_id=WP_001186374.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 22300 23046 . - . ID=gene-AC57_RS14365;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AC57_RS14365;old_locus_tag=AC57_1941 NZ_JJLR01000070.1 Protein Homology CDS 22300 23046 . - 0 ID=cds-WP_000163771.1;Parent=gene-AC57_RS14365;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AC57_RS14365;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 23482 25416 . + . ID=gene-AC57_RS14360;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AC57_RS14360;old_locus_tag=AC57_1942 NZ_JJLR01000070.1 Protein Homology CDS 23482 25416 . + 0 ID=cds-WP_032236933.1;Parent=gene-AC57_RS14360;Dbxref=GenBank:WP_032236933.1;Name=WP_032236933.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AC57_RS14360;product=protein kinase YeaG;protein_id=WP_032236933.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 25529 26812 . + . ID=gene-AC57_RS14355;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AC57_RS14355;old_locus_tag=AC57_1943 NZ_JJLR01000070.1 Protein Homology CDS 25529 26812 . + 0 ID=cds-WP_032279896.1;Parent=gene-AC57_RS14355;Dbxref=GenBank:WP_032279896.1;Name=WP_032279896.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310520.1;locus_tag=AC57_RS14355;product=YeaH/YhbH family protein;protein_id=WP_032279896.1;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 26959 28434 . + . ID=gene-AC57_RS14350;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=AC57_RS14350;old_locus_tag=AC57_1944 NZ_JJLR01000070.1 Protein Homology CDS 26959 28434 . + 0 ID=cds-WP_001400442.1;Parent=gene-AC57_RS14350;Dbxref=GenBank:WP_001400442.1;Name=WP_001400442.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;gene=cdgI;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AC57_RS14350;product=sensor domain-containing diguanylate cyclase;protein_id=WP_001400442.1;transl_table=11 NZ_JJLR01000070.1 RefSeq pseudogene 28615 29307 . + . ID=gene-AC57_RS14345;Name=AC57_RS14345;end_range=29307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14345;old_locus_tag=AC57_1945;partial=true;pseudo=true NZ_JJLR01000070.1 Protein Homology CDS 28615 29307 . + 0 ID=cds-AC57_RS14345;Parent=gene-AC57_RS14345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=29307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AC57_RS14345;partial=true;product=GAPES1 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000070.1 RefSeq gene 29287 29522 . - . ID=gene-AC57_RS27110;Name=AC57_RS27110;end_range=29522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27110;partial=true NZ_JJLR01000070.1 Protein Homology CDS 29287 29522 . - 2 ID=cds-WP_001393844.1;Parent=gene-AC57_RS27110;Dbxref=GenBank:WP_001393844.1;Name=WP_001393844.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=29522,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27110;partial=true;product=IS1 family transposase;protein_id=WP_001393844.1;transl_table=11 ##sequence-region NZ_JJLR01000071.1 1 7990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000071.1 RefSeq region 1 7990 . + . ID=NZ_JJLR01000071.1:1..7990;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000071.1 RefSeq gene 1 196 . - . ID=gene-AC57_RS14340;Name=AC57_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14340;old_locus_tag=AC57_1946;partial=true;start_range=.,1 NZ_JJLR01000071.1 Protein Homology CDS 1 196 . - 0 ID=cds-WP_000179197.1;Parent=gene-AC57_RS14340;Dbxref=GenBank:WP_000179197.1;Name=WP_000179197.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS14340;partial=true;product=IS1 family transposase;protein_id=WP_000179197.1;start_range=.,1;transl_table=11 NZ_JJLR01000071.1 RefSeq pseudogene 252 1094 . + . ID=gene-AC57_RS14335;Name=AC57_RS14335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14335;old_locus_tag=AC57_1947;partial=true;pseudo=true;start_range=.,252 NZ_JJLR01000071.1 Protein Homology CDS 252 1094 . + 0 ID=cds-AC57_RS14335;Parent=gene-AC57_RS14335;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AC57_RS14335;partial=true;product=GAPES1 domain-containing protein;pseudo=true;start_range=.,252;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 1137 1640 . + . ID=gene-AC57_RS14330;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AC57_RS14330;old_locus_tag=AC57_1948 NZ_JJLR01000071.1 Protein Homology CDS 1137 1640 . + 0 ID=cds-WP_000138051.1;Parent=gene-AC57_RS14330;Dbxref=GenBank:WP_000138051.1;Name=WP_000138051.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AC57_RS14330;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138051.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 1641 1745 . - . ID=gene-AC57_RS0124155;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AC57_RS0124155 NZ_JJLR01000071.1 Protein Homology CDS 1641 1745 . - 0 ID=cds-WP_000999630.1;Parent=gene-AC57_RS0124155;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AC57_RS0124155;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 1915 2361 . + . ID=gene-AC57_RS14325;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AC57_RS14325;old_locus_tag=AC57_1949 NZ_JJLR01000071.1 Protein Homology CDS 1915 2361 . + 0 ID=cds-WP_000460707.1;Parent=gene-AC57_RS14325;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AC57_RS14325;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 2318 3139 . - . ID=gene-AC57_RS14320;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=AC57_RS14320;old_locus_tag=AC57_1950 NZ_JJLR01000071.1 Protein Homology CDS 2318 3139 . - 0 ID=cds-WP_000972248.1;Parent=gene-AC57_RS14320;Dbxref=GenBank:WP_000972248.1;Name=WP_000972248.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AC57_RS14320;product=DNA-binding transcriptional regulator NimR;protein_id=WP_000972248.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 3236 4417 . + . ID=gene-AC57_RS14315;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AC57_RS14315;old_locus_tag=AC57_1951 NZ_JJLR01000071.1 Protein Homology CDS 3236 4417 . + 0 ID=cds-WP_000128491.1;Parent=gene-AC57_RS14315;Dbxref=GenBank:WP_000128491.1;Name=WP_000128491.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416305.1;locus_tag=AC57_RS14315;product=2-nitroimidazole transporter;protein_id=WP_000128491.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 4472 4819 . + . ID=gene-AC57_RS14310;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AC57_RS14310;old_locus_tag=AC57_1952 NZ_JJLR01000071.1 Protein Homology CDS 4472 4819 . + 0 ID=cds-WP_001326526.1;Parent=gene-AC57_RS14310;Dbxref=GenBank:WP_001326526.1;Name=WP_001326526.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416306.2;locus_tag=AC57_RS14310;product=DUF488 domain-containing protein;protein_id=WP_001326526.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 4841 5095 . - . ID=gene-AC57_RS14305;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AC57_RS14305;old_locus_tag=AC57_1953 NZ_JJLR01000071.1 Protein Homology CDS 4841 5095 . - 0 ID=cds-WP_000691930.1;Parent=gene-AC57_RS14305;Dbxref=GenBank:WP_000691930.1;Name=WP_000691930.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AC57_RS14305;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_000691930.1;transl_table=11 NZ_JJLR01000071.1 RefSeq pseudogene 5278 6303 . + . ID=gene-AC57_RS0124160;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=pseudogene;locus_tag=AC57_RS0124160;pseudo=true NZ_JJLR01000071.1 Protein Homology CDS 5278 6303 . + 0 ID=cds-AC57_RS0124160;Parent=gene-AC57_RS0124160;Note=internal stop;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AC57_RS0124160;product=diguanylate cyclase DgcP;pseudo=true;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 6336 6434 . + . ID=gene-AC57_RS0124165;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AC57_RS0124165 NZ_JJLR01000071.1 Protein Homology CDS 6336 6434 . + 0 ID=cds-WP_001219350.1;Parent=gene-AC57_RS0124165;Dbxref=GenBank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AC57_RS0124165;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 6437 6511 . + . ID=gene-AC57_RS28970;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AC57_RS28970 NZ_JJLR01000071.1 Protein Homology CDS 6437 6511 . + 0 ID=cds-WP_001386836.1;Parent=gene-AC57_RS28970;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AC57_RS28970;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 6570 6818 . - . ID=gene-AC57_RS14300;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AC57_RS14300;old_locus_tag=AC57_1957 NZ_JJLR01000071.1 Protein Homology CDS 6570 6818 . - 0 ID=cds-WP_000512153.1;Parent=gene-AC57_RS14300;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AC57_RS14300;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JJLR01000071.1 RefSeq gene 6966 7148 . - . ID=gene-AC57_RS14295;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AC57_RS14295;old_locus_tag=AC57_1958 NZ_JJLR01000071.1 Protein Homology CDS 6966 7148 . - 0 ID=cds-WP_000513737.1;Parent=gene-AC57_RS14295;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AC57_RS14295;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JJLR01000071.1 RefSeq pseudogene 7152 7400 . - . ID=gene-AC57_RS14290;Name=yeaR;end_range=7400,.;gbkey=Gene;gene=yeaR;gene_biotype=pseudogene;locus_tag=AC57_RS14290;old_locus_tag=AC57_1959;partial=true;pseudo=true NZ_JJLR01000071.1 Protein Homology CDS 7152 7400 . - 0 ID=cds-AC57_RS14290;Parent=gene-AC57_RS14290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7400,.;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AC57_RS14290;partial=true;product=DUF1971 domain-containing protein YeaR;pseudo=true;transl_table=11 NZ_JJLR01000071.1 RefSeq pseudogene 7455 7990 . + . ID=gene-AC57_RS14285;Name=AC57_RS14285;end_range=7990,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14285;old_locus_tag=AC57_1960;partial=true;pseudo=true NZ_JJLR01000071.1 Protein Homology CDS 7455 7990 . + 0 ID=cds-AC57_RS14285;Parent=gene-AC57_RS14285;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=7990,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS14285;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000072.1 1 14926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000072.1 RefSeq region 1 14926 . + . ID=NZ_JJLR01000072.1:1..14926;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000072.1 RefSeq gene 1 113 . + . ID=gene-AC57_RS30730;Name=AC57_RS30730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30730;partial=true;start_range=.,1 NZ_JJLR01000072.1 Protein Homology CDS 1 113 . + 2 ID=cds-WP_024202419.1;Parent=gene-AC57_RS30730;Dbxref=GenBank:WP_024202419.1;Name=WP_024202419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30730;partial=true;product=hypothetical protein;protein_id=WP_024202419.1;start_range=.,1;transl_table=11 NZ_JJLR01000072.1 RefSeq pseudogene 284 406 . - . ID=gene-AC57_RS0124175;Name=AC57_RS0124175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124175;partial=true;pseudo=true;start_range=.,284 NZ_JJLR01000072.1 Protein Homology CDS 284 406 . - 0 ID=cds-AC57_RS0124175;Parent=gene-AC57_RS0124175;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AC57_RS0124175;partial=true;product=DUF1971 domain-containing protein;pseudo=true;start_range=.,284;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 579 1217 . - . ID=gene-AC57_RS14280;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AC57_RS14280;old_locus_tag=AC57_1962 NZ_JJLR01000072.1 Protein Homology CDS 579 1217 . - 0 ID=cds-WP_000457206.1;Parent=gene-AC57_RS14280;Dbxref=GenBank:WP_000457206.1;Name=WP_000457206.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416312.1;locus_tag=AC57_RS14280;product=leucine efflux protein LeuE;protein_id=WP_000457206.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 1344 2267 . - . ID=gene-AC57_RS14275;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AC57_RS14275;old_locus_tag=AC57_1963 NZ_JJLR01000072.1 Protein Homology CDS 1344 2267 . - 0 ID=cds-WP_001300522.1;Parent=gene-AC57_RS14275;Dbxref=GenBank:WP_001300522.1;Name=WP_001300522.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AC57_RS14275;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_001300522.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 2370 3455 . + . ID=gene-AC57_RS14270;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AC57_RS14270;old_locus_tag=AC57_1964 NZ_JJLR01000072.1 Protein Homology CDS 2370 3455 . + 0 ID=cds-WP_032285697.1;Parent=gene-AC57_RS14270;Dbxref=GenBank:WP_032285697.1;Name=WP_032285697.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416314.1;locus_tag=AC57_RS14270;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_032285697.1;transl_table=11 NZ_JJLR01000072.1 RefSeq pseudogene 3610 5091 . + . ID=gene-AC57_RS14265;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=pseudogene;locus_tag=AC57_RS14265;old_locus_tag=AC57_1965;partial=true;pseudo=true;start_range=.,3610 NZ_JJLR01000072.1 Protein Homology CDS 3610 5091 . + 0 ID=cds-AC57_RS14265;Parent=gene-AC57_RS14265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AC57_RS14265;partial=true;product=BCCT family transporter YeaV;pseudo=true;start_range=.,3610;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 5123 6247 . + . ID=gene-AC57_RS14260;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AC57_RS14260;old_locus_tag=AC57_1966 NZ_JJLR01000072.1 Protein Homology CDS 5123 6247 . + 0 ID=cds-WP_000067822.1;Parent=gene-AC57_RS14260;Dbxref=GenBank:WP_000067822.1;Name=WP_000067822.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AC57_RS14260;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_000067822.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 6303 7268 . + . ID=gene-AC57_RS14255;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AC57_RS14255;old_locus_tag=AC57_1967 NZ_JJLR01000072.1 Protein Homology CDS 6303 7268 . + 0 ID=cds-WP_001287026.1;Parent=gene-AC57_RS14255;Dbxref=GenBank:WP_001287026.1;Name=WP_001287026.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AC57_RS14255;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_001287026.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 7322 8437 . - . ID=gene-AC57_RS14250;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AC57_RS14250;old_locus_tag=AC57_1968 NZ_JJLR01000072.1 Protein Homology CDS 7322 8437 . - 0 ID=cds-WP_001307844.1;Parent=gene-AC57_RS14250;Dbxref=GenBank:WP_001307844.1;Name=WP_001307844.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707318.2;locus_tag=AC57_RS14250;product=ribonuclease D;protein_id=WP_001307844.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 8519 10204 . - . ID=gene-AC57_RS14245;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AC57_RS14245;old_locus_tag=AC57_1969 NZ_JJLR01000072.1 Protein Homology CDS 8519 10204 . - 0 ID=cds-WP_000758422.1;Parent=gene-AC57_RS14245;Dbxref=GenBank:WP_000758422.1;Name=WP_000758422.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AC57_RS14245;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_000758422.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 10409 10990 . - . ID=gene-AC57_RS14240;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AC57_RS14240;old_locus_tag=AC57_1970 NZ_JJLR01000072.1 Protein Homology CDS 10409 10990 . - 0 ID=cds-WP_000290576.1;Parent=gene-AC57_RS14240;Dbxref=GenBank:WP_000290576.1;Name=WP_000290576.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AC57_RS14240;product=Slp family lipoprotein YeaY;protein_id=WP_000290576.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 11030 11725 . - . ID=gene-AC57_RS14235;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AC57_RS14235;old_locus_tag=AC57_1971 NZ_JJLR01000072.1 Protein Homology CDS 11030 11725 . - 0 ID=cds-WP_001220966.1;Parent=gene-AC57_RS14235;Dbxref=GenBank:WP_001220966.1;Name=WP_001220966.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416321.1;locus_tag=AC57_RS14235;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001220966.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 11783 13693 . - . ID=gene-AC57_RS14230;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AC57_RS14230;old_locus_tag=AC57_1972 NZ_JJLR01000072.1 Protein Homology CDS 11783 13693 . - 0 ID=cds-WP_000128847.1;Parent=gene-AC57_RS14230;Dbxref=GenBank:WP_000128847.1;Name=WP_000128847.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AC57_RS14230;product=ATP-dependent DNA helicase;protein_id=WP_000128847.1;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 13825 14169 . + . ID=gene-AC57_RS14225;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AC57_RS14225;old_locus_tag=AC57_1973 NZ_JJLR01000072.1 Protein Homology CDS 13825 14169 . + 0 ID=cds-WP_032285698.1;Parent=gene-AC57_RS14225;Dbxref=GenBank:WP_032285698.1;Name=WP_032285698.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AC57_RS14225;product=RidA family protein;protein_id=WP_032285698.1;transl_table=11 NZ_JJLR01000072.1 RefSeq pseudogene 14591 14680 . + . ID=gene-AC57_RS30440;Name=AC57_RS30440;end_range=14680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30440;partial=true;pseudo=true NZ_JJLR01000072.1 Protein Homology CDS 14591 14680 . + 0 ID=cds-AC57_RS30440;Parent=gene-AC57_RS30440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AC57_RS30440;partial=true;product=DUF1889 family protein;pseudo=true;transl_table=11 NZ_JJLR01000072.1 RefSeq gene 14696 14926 . - . ID=gene-AC57_RS14220;Name=AC57_RS14220;end_range=14926,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14220;old_locus_tag=AC57_1974;partial=true NZ_JJLR01000072.1 Protein Homology CDS 14696 14926 . - 0 ID=cds-WP_005134386.1;Parent=gene-AC57_RS14220;Dbxref=GenBank:WP_005134386.1;Name=WP_005134386.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=14926,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS14220;partial=true;product=IS1 family transposase;protein_id=WP_005134386.1;transl_table=11 ##sequence-region NZ_JJLR01000073.1 1 1364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000073.1 RefSeq region 1 1364 . + . ID=NZ_JJLR01000073.1:1..1364;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000073.1 RefSeq pseudogene 1 447 . + . ID=gene-AC57_RS14215;Name=AC57_RS14215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS14215;old_locus_tag=AC57_1975;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000073.1 Protein Homology CDS 1 447 . + 0 ID=cds-AC57_RS14215;Parent=gene-AC57_RS14215;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS14215;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000073.1 RefSeq pseudogene 464 754 . + . ID=gene-AC57_RS0124190;Name=AC57_RS0124190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124190;partial=true;pseudo=true;start_range=.,464 NZ_JJLR01000073.1 Protein Homology CDS 464 754 . + 0 ID=cds-AC57_RS0124190;Parent=gene-AC57_RS0124190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246965.1;locus_tag=AC57_RS0124190;partial=true;product=antiterminator Q family protein;pseudo=true;start_range=.,464;transl_table=11 NZ_JJLR01000073.1 RefSeq gene 943 1364 . - . ID=gene-AC57_RS14210;Name=AC57_RS14210;end_range=1364,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14210;old_locus_tag=AC57_1976;partial=true NZ_JJLR01000073.1 Protein Homology CDS 943 1364 . - 2 ID=cds-WP_032285700.1;Parent=gene-AC57_RS14210;Dbxref=GenBank:WP_032285700.1;Name=WP_032285700.1;end_range=1364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS14210;partial=true;product=IS66 family transposase;protein_id=WP_032285700.1;transl_table=11 ##sequence-region NZ_JJLR01000074.1 1 47119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000074.1 RefSeq region 1 47119 . + . ID=NZ_JJLR01000074.1:1..47119;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000074.1 RefSeq gene 1 264 . - . ID=gene-AC57_RS14205;Name=AC57_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS14205;old_locus_tag=AC57_1977;partial=true;start_range=.,1 NZ_JJLR01000074.1 Protein Homology CDS 1 264 . - 0 ID=cds-WP_001508402.1;Parent=gene-AC57_RS14205;Dbxref=GenBank:WP_001508402.1;Name=WP_001508402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS14205;partial=true;product=IS1-like element transposase;protein_id=WP_001508402.1;start_range=.,1;transl_table=11 NZ_JJLR01000074.1 RefSeq pseudogene 323 538 . + . ID=gene-AC57_RS0124195;Name=AC57_RS0124195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124195;partial=true;pseudo=true;start_range=.,323 NZ_JJLR01000074.1 Protein Homology CDS 323 538 . + 0 ID=cds-AC57_RS0124195;Parent=gene-AC57_RS0124195;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AC57_RS0124195;partial=true;product=DUF1889 family protein;pseudo=true;start_range=.,323;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 658 837 . - . ID=gene-AC57_RS14200;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AC57_RS14200;old_locus_tag=AC57_1978 NZ_JJLR01000074.1 Protein Homology CDS 658 837 . - 0 ID=cds-WP_032237410.1;Parent=gene-AC57_RS14200;Dbxref=GenBank:WP_032237410.1;Name=WP_032237410.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AC57_RS14200;product=YoaH family protein;protein_id=WP_032237410.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 911 2272 . + . ID=gene-AC57_RS14195;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AC57_RS14195;old_locus_tag=AC57_1979 NZ_JJLR01000074.1 Protein Homology CDS 911 2272 . + 0 ID=cds-WP_000854972.1;Parent=gene-AC57_RS14195;Dbxref=GenBank:WP_000854972.1;Name=WP_000854972.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707310.1;locus_tag=AC57_RS14195;product=aminodeoxychorismate synthase component 1;protein_id=WP_000854972.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 2276 2854 . + . ID=gene-AC57_RS14190;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AC57_RS14190;old_locus_tag=AC57_1980 NZ_JJLR01000074.1 Protein Homology CDS 2276 2854 . + 0 ID=cds-WP_000456715.1;Parent=gene-AC57_RS14190;Dbxref=GenBank:WP_000456715.1;Name=WP_000456715.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416327.1;locus_tag=AC57_RS14190;product=CoA pyrophosphatase;protein_id=WP_000456715.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 3038 4402 . + . ID=gene-AC57_RS14185;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AC57_RS14185;old_locus_tag=AC57_1981 NZ_JJLR01000074.1 Protein Homology CDS 3038 4402 . + 0 ID=cds-WP_000624298.1;Parent=gene-AC57_RS14185;Dbxref=GenBank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AC57_RS14185;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 4533 6131 . + . ID=gene-AC57_RS14180;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=AC57_RS14180;old_locus_tag=AC57_1982 NZ_JJLR01000074.1 Protein Homology CDS 4533 6131 . + 0 ID=cds-WP_001359300.1;Parent=gene-AC57_RS14180;Dbxref=GenBank:WP_001359300.1;Name=WP_001359300.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310551.2;locus_tag=AC57_RS14180;product=EAL domain-containing protein;protein_id=WP_001359300.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 6135 7691 . - . ID=gene-AC57_RS14175;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AC57_RS14175;old_locus_tag=AC57_1983 NZ_JJLR01000074.1 Protein Homology CDS 6135 7691 . - 0 ID=cds-WP_000394983.1;Parent=gene-AC57_RS14175;Dbxref=GenBank:WP_000394983.1;Name=WP_000394983.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AC57_RS14175;product=CNNM family cation transport protein YoaE;protein_id=WP_000394983.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 7679 7837 . - . ID=gene-AC57_RS31005;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AC57_RS31005 NZ_JJLR01000074.1 Protein Homology CDS 7679 7837 . - 0 ID=cds-WP_001327808.1;Parent=gene-AC57_RS31005;Dbxref=GenBank:WP_001327808.1;Name=WP_001327808.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AC57_RS31005;product=protein YoaL;protein_id=WP_001327808.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 8154 9125 . + . ID=gene-AC57_RS14170;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AC57_RS14170;old_locus_tag=AC57_1984 NZ_JJLR01000074.1 Protein Homology CDS 8154 9125 . + 0 ID=cds-WP_000150543.1;Parent=gene-AC57_RS14170;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AC57_RS14170;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 9188 9988 . + . ID=gene-AC57_RS14165;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AC57_RS14165;old_locus_tag=AC57_1985 NZ_JJLR01000074.1 Protein Homology CDS 9188 9988 . + 0 ID=cds-WP_000406926.1;Parent=gene-AC57_RS14165;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AC57_RS14165;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 10001 10852 . + . ID=gene-AC57_RS14160;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AC57_RS14160;old_locus_tag=AC57_1986 NZ_JJLR01000074.1 Protein Homology CDS 10001 10852 . + 0 ID=cds-WP_000228655.1;Parent=gene-AC57_RS14160;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AC57_RS14160;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 10907 11365 . + . ID=gene-AC57_RS14155;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AC57_RS14155;old_locus_tag=AC57_1987 NZ_JJLR01000074.1 Protein Homology CDS 10907 11365 . + 0 ID=cds-WP_000156255.1;Parent=gene-AC57_RS14155;Dbxref=GenBank:WP_000156255.1;Name=WP_000156255.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=AC57_RS14155;product=DUF986 family protein;protein_id=WP_000156255.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 11794 12360 . + . ID=gene-AC57_RS14150;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AC57_RS14150;old_locus_tag=AC57_1988 NZ_JJLR01000074.1 Protein Homology CDS 11794 12360 . + 0 ID=cds-WP_001296134.1;Parent=gene-AC57_RS14150;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AC57_RS14150;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 12357 13166 . - . ID=gene-AC57_RS14145;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AC57_RS14145;old_locus_tag=AC57_1989 NZ_JJLR01000074.1 Protein Homology CDS 12357 13166 . - 0 ID=cds-WP_032237411.1;Parent=gene-AC57_RS14145;Dbxref=GenBank:WP_032237411.1;Name=WP_032237411.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416336.1;locus_tag=AC57_RS14145;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_032237411.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 13332 13541 . - . ID=gene-AC57_RS14140;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC57_RS14140;old_locus_tag=AC57_1990 NZ_JJLR01000074.1 Protein Homology CDS 13332 13541 . - 0 ID=cds-WP_001062678.1;Parent=gene-AC57_RS14140;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AC57_RS14140;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 13554 13697 . - . ID=gene-AC57_RS14135;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=AC57_RS14135;old_locus_tag=AC57_1991 NZ_JJLR01000074.1 Protein Homology CDS 13554 13697 . - 0 ID=cds-WP_032279756.1;Parent=gene-AC57_RS14135;Dbxref=GenBank:WP_032279756.1;Name=WP_032279756.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AC57_RS14135;product=YobF family protein;protein_id=WP_032279756.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 14369 14653 . - . ID=gene-AC57_RS14130;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AC57_RS14130;old_locus_tag=AC57_1992 NZ_JJLR01000074.1 Protein Homology CDS 14369 14653 . - 0 ID=cds-WP_032279757.1;Parent=gene-AC57_RS14130;Dbxref=GenBank:WP_032279757.1;Name=WP_032279757.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416339.1;locus_tag=AC57_RS14130;product=YebO family protein;protein_id=WP_032279757.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 14728 14871 . - . ID=gene-AC57_RS14125;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AC57_RS14125;old_locus_tag=AC57_1993 NZ_JJLR01000074.1 Protein Homology CDS 14728 14871 . - 0 ID=cds-WP_000714550.1;Parent=gene-AC57_RS14125;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AC57_RS14125;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 15030 15269 . + . ID=gene-AC57_RS14120;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AC57_RS14120;old_locus_tag=AC57_1994 NZ_JJLR01000074.1 Protein Homology CDS 15030 15269 . + 0 ID=cds-WP_001211011.1;Parent=gene-AC57_RS14120;Dbxref=GenBank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AC57_RS14120;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 15412 16203 . - . ID=gene-AC57_RS14115;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AC57_RS14115;old_locus_tag=AC57_1995 NZ_JJLR01000074.1 Protein Homology CDS 15412 16203 . - 0 ID=cds-WP_001262182.1;Parent=gene-AC57_RS14115;Dbxref=GenBank:WP_001262182.1;Name=WP_001262182.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=AC57_RS14115;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262182.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 16380 17753 . + . ID=gene-AC57_RS14110;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AC57_RS14110;old_locus_tag=AC57_1996 NZ_JJLR01000074.1 Protein Homology CDS 16380 17753 . + 0 ID=cds-WP_032237412.1;Parent=gene-AC57_RS14110;Dbxref=GenBank:WP_032237412.1;Name=WP_032237412.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416342.4;locus_tag=AC57_RS14110;product=MFS transporter;protein_id=WP_032237412.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 17799 18680 . - . ID=gene-AC57_RS14105;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AC57_RS14105;old_locus_tag=AC57_1997 NZ_JJLR01000074.1 Protein Homology CDS 17799 18680 . - 0 ID=cds-WP_000984517.1;Parent=gene-AC57_RS14105;Dbxref=GenBank:WP_000984517.1;Name=WP_000984517.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AC57_RS14105;product=protease HtpX;protein_id=WP_000984517.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 18872 20920 . - . ID=gene-AC57_RS14100;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AC57_RS14100;old_locus_tag=AC57_1998 NZ_JJLR01000074.1 Protein Homology CDS 18872 20920 . - 0 ID=cds-WP_001055779.1;Parent=gene-AC57_RS14100;Dbxref=GenBank:WP_001055779.1;Name=WP_001055779.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=AC57_RS14100;product=carboxy terminal-processing peptidase;protein_id=WP_001055779.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 20940 21638 . - . ID=gene-AC57_RS14095;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AC57_RS14095;old_locus_tag=AC57_1999 NZ_JJLR01000074.1 Protein Homology CDS 20940 21638 . - 0 ID=cds-WP_000431370.1;Parent=gene-AC57_RS14095;Dbxref=GenBank:WP_000431370.1;Name=WP_000431370.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707288.3;locus_tag=AC57_RS14095;product=RNA chaperone ProQ;protein_id=WP_000431370.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 21735 22232 . - . ID=gene-AC57_RS14090;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AC57_RS14090;old_locus_tag=AC57_2000 NZ_JJLR01000074.1 Protein Homology CDS 21735 22232 . - 0 ID=cds-WP_001043877.1;Parent=gene-AC57_RS14090;Dbxref=GenBank:WP_001043877.1;Name=WP_001043877.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416346.4;locus_tag=AC57_RS14090;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043877.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 22362 23645 . + . ID=gene-AC57_RS14085;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AC57_RS14085;old_locus_tag=AC57_2001 NZ_JJLR01000074.1 Protein Homology CDS 22362 23645 . + 0 ID=cds-WP_001207283.1;Parent=gene-AC57_RS14085;Dbxref=GenBank:WP_001207283.1;Name=WP_001207283.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AC57_RS14085;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207283.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 23614 26247 . + . ID=gene-AC57_RS14080;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AC57_RS14080;old_locus_tag=AC57_2002 NZ_JJLR01000074.1 Protein Homology CDS 23614 26247 . + 0 ID=cds-WP_001297532.1;Parent=gene-AC57_RS14080;Dbxref=GenBank:WP_001297532.1;Name=WP_001297532.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AC57_RS14080;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_001297532.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 26327 27766 . + . ID=gene-AC57_RS14075;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AC57_RS14075;old_locus_tag=AC57_2003 NZ_JJLR01000074.1 Protein Homology CDS 26327 27766 . + 0 ID=cds-WP_032279760.1;Parent=gene-AC57_RS14075;Dbxref=GenBank:WP_032279760.1;Name=WP_032279760.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AC57_RS14075;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_032279760.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 27884 28120 . + . ID=gene-AC57_RS14070;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AC57_RS14070;old_locus_tag=AC57_2004 NZ_JJLR01000074.1 Protein Homology CDS 27884 28120 . + 0 ID=cds-WP_001338166.1;Parent=gene-AC57_RS14070;Dbxref=GenBank:WP_001338166.1;Name=WP_001338166.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AC57_RS14070;product=YebV family protein;protein_id=WP_001338166.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 28225 28416 . + . ID=gene-AC57_RS14065;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AC57_RS14065;old_locus_tag=AC57_2005 NZ_JJLR01000074.1 Protein Homology CDS 28225 28416 . + 0 ID=cds-WP_001338167.1;Parent=gene-AC57_RS14065;Dbxref=GenBank:WP_001338167.1;Name=WP_001338167.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AC57_RS14065;product=YebW family protein;protein_id=WP_001338167.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 28417 29073 . - . ID=gene-AC57_RS14060;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AC57_RS14060;old_locus_tag=AC57_2006 NZ_JJLR01000074.1 Protein Homology CDS 28417 29073 . - 0 ID=cds-WP_000812732.1;Parent=gene-AC57_RS14060;Dbxref=GenBank:WP_000812732.1;Name=WP_000812732.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416352.4;locus_tag=AC57_RS14060;product=protein-serine/threonine phosphatase;protein_id=WP_000812732.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 29469 29810 . - . ID=gene-AC57_RS14055;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AC57_RS14055;old_locus_tag=AC57_2007 NZ_JJLR01000074.1 Protein Homology CDS 29469 29810 . - 0 ID=cds-WP_077756434.1;Parent=gene-AC57_RS14055;Dbxref=GenBank:WP_077756434.1;Name=WP_077756434.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310576.1;locus_tag=AC57_RS14055;product=YebY family protein;protein_id=WP_077756434.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 29823 30695 . - . ID=gene-AC57_RS14050;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AC57_RS14050;old_locus_tag=AC57_2008 NZ_JJLR01000074.1 Protein Homology CDS 29823 30695 . - 0 ID=cds-WP_000879295.1;Parent=gene-AC57_RS14050;Dbxref=GenBank:WP_000879295.1;Name=WP_000879295.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416354.1;locus_tag=AC57_RS14050;product=copper homeostasis membrane protein CopD;protein_id=WP_000879295.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 30699 31073 . - . ID=gene-AC57_RS14045;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AC57_RS14045;old_locus_tag=AC57_2009 NZ_JJLR01000074.1 Protein Homology CDS 30699 31073 . - 0 ID=cds-WP_000168747.1;Parent=gene-AC57_RS14045;Dbxref=GenBank:WP_000168747.1;Name=WP_000168747.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AC57_RS14045;product=CopC domain-containing protein YobA;protein_id=WP_000168747.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 31212 31442 . + . ID=gene-AC57_RS14040;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AC57_RS14040;old_locus_tag=AC57_2010 NZ_JJLR01000074.1 Protein Homology CDS 31212 31442 . + 0 ID=cds-WP_032237414.1;Parent=gene-AC57_RS14040;Dbxref=GenBank:WP_032237414.1;Name=WP_032237414.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AC57_RS14040;product=DNA polymerase III subunit theta;protein_id=WP_032237414.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 31544 32200 . + . ID=gene-AC57_RS14035;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AC57_RS14035;old_locus_tag=AC57_2011 NZ_JJLR01000074.1 Protein Homology CDS 31544 32200 . + 0 ID=cds-WP_000011658.1;Parent=gene-AC57_RS14035;Dbxref=GenBank:WP_000011658.1;Name=WP_000011658.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416357.1;locus_tag=AC57_RS14035;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011658.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 32224 32886 . + . ID=gene-AC57_RS14030;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AC57_RS14030;old_locus_tag=AC57_2012 NZ_JJLR01000074.1 Protein Homology CDS 32224 32886 . + 0 ID=cds-WP_032237415.1;Parent=gene-AC57_RS14030;Dbxref=GenBank:WP_032237415.1;Name=WP_032237415.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AC57_RS14030;product=exodeoxyribonuclease X;protein_id=WP_032237415.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 32883 34943 . - . ID=gene-AC57_RS14025;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AC57_RS14025;old_locus_tag=AC57_2013 NZ_JJLR01000074.1 Protein Homology CDS 32883 34943 . - 0 ID=cds-WP_000936952.1;Parent=gene-AC57_RS14025;Dbxref=GenBank:WP_000936952.1;Name=WP_000936952.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416359.1;locus_tag=AC57_RS14025;product=oligopeptidase B;protein_id=WP_000936952.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 35152 35811 . - . ID=gene-AC57_RS14020;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AC57_RS14020;old_locus_tag=AC57_2014 NZ_JJLR01000074.1 Protein Homology CDS 35152 35811 . - 0 ID=cds-WP_000024745.1;Parent=gene-AC57_RS14020;Dbxref=GenBank:WP_000024745.1;Name=WP_000024745.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=AC57_RS14020;product=tellurite resistance TerB family protein;protein_id=WP_000024745.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 36138 36494 . - . ID=gene-AC57_RS14015;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AC57_RS14015;old_locus_tag=AC57_2015 NZ_JJLR01000074.1 Protein Homology CDS 36138 36494 . - 0 ID=cds-WP_001295500.1;Parent=gene-AC57_RS14015;Dbxref=GenBank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AC57_RS14015;product=protein YebF;protein_id=WP_001295500.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 36561 36851 . - . ID=gene-AC57_RS14010;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AC57_RS14010;old_locus_tag=AC57_2016 NZ_JJLR01000074.1 Protein Homology CDS 36561 36851 . - 0 ID=cds-WP_000257738.1;Parent=gene-AC57_RS14010;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AC57_RS14010;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 36985 38163 . + . ID=gene-AC57_RS14005;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AC57_RS14005;old_locus_tag=AC57_2017 NZ_JJLR01000074.1 Protein Homology CDS 36985 38163 . + 0 ID=cds-WP_032279758.1;Parent=gene-AC57_RS14005;Dbxref=GenBank:WP_032279758.1;Name=WP_032279758.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416363.1;locus_tag=AC57_RS14005;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_032279758.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 38219 38860 . - . ID=gene-AC57_RS14000;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AC57_RS14000;old_locus_tag=AC57_2018 NZ_JJLR01000074.1 Protein Homology CDS 38219 38860 . - 0 ID=cds-WP_000800512.1;Parent=gene-AC57_RS14000;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AC57_RS14000;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 38897 40708 . - . ID=gene-AC57_RS13995;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AC57_RS13995;old_locus_tag=AC57_2019 NZ_JJLR01000074.1 Protein Homology CDS 38897 40708 . - 0 ID=cds-WP_001069467.1;Parent=gene-AC57_RS13995;Dbxref=GenBank:WP_001069467.1;Name=WP_001069467.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AC57_RS13995;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 40943 42418 . - . ID=gene-AC57_RS13990;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AC57_RS13990;old_locus_tag=AC57_2020 NZ_JJLR01000074.1 Protein Homology CDS 40943 42418 . - 0 ID=cds-WP_000301727.1;Parent=gene-AC57_RS13990;Dbxref=GenBank:WP_000301727.1;Name=WP_000301727.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AC57_RS13990;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301727.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 42756 43625 . + . ID=gene-AC57_RS13980;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AC57_RS13980;old_locus_tag=AC57_2022 NZ_JJLR01000074.1 Protein Homology CDS 42756 43625 . + 0 ID=cds-WP_001056706.1;Parent=gene-AC57_RS13980;Dbxref=GenBank:WP_001056706.1;Name=WP_001056706.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416367.1;locus_tag=AC57_RS13980;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056706.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 43753 45195 . + . ID=gene-AC57_RS13975;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AC57_RS13975;old_locus_tag=AC57_2023 NZ_JJLR01000074.1 Protein Homology CDS 43753 45195 . + 0 ID=cds-WP_000091148.1;Parent=gene-AC57_RS13975;Dbxref=GenBank:WP_000091148.1;Name=WP_000091148.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AC57_RS13975;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 45255 45554 . - . ID=gene-AC57_RS31235;Name=AC57_RS31235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31235 NZ_JJLR01000074.1 Protein Homology CDS 45255 45554 . - 0 ID=cds-WP_223699811.1;Parent=gene-AC57_RS31235;Dbxref=GenBank:WP_223699811.1;Name=WP_223699811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013909.6;locus_tag=AC57_RS31235;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_223699811.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 45535 46095 . - . ID=gene-AC57_RS31015;Name=AC57_RS31015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31015;old_locus_tag=AC57_2024 NZ_JJLR01000074.1 Protein Homology CDS 45535 46095 . - 0 ID=cds-WP_282620493.1;Parent=gene-AC57_RS31015;Dbxref=GenBank:WP_282620493.1;Name=WP_282620493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013909.6;locus_tag=AC57_RS31015;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_282620493.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 46118 46816 . - . ID=gene-AC57_RS13970;Name=AC57_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13970;old_locus_tag=AC57_2025 NZ_JJLR01000074.1 Protein Homology CDS 46118 46816 . - 0 ID=cds-WP_032246277.1;Parent=gene-AC57_RS13970;Dbxref=GenBank:WP_032246277.1;Name=WP_032246277.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001326057.1;locus_tag=AC57_RS13970;product=alpha/beta hydrolase;protein_id=WP_032246277.1;transl_table=11 NZ_JJLR01000074.1 RefSeq gene 46922 47119 . + . ID=gene-AC57_RS27145;Name=AC57_RS27145;end_range=47119,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27145;old_locus_tag=AC57_2026;partial=true NZ_JJLR01000074.1 Protein Homology CDS 46922 47119 . + 0 ID=cds-WP_000179198.1-2;Parent=gene-AC57_RS27145;Dbxref=GenBank:WP_000179198.1;Name=WP_000179198.1;Ontology_term=GO:0006313;end_range=47119,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27145;partial=true;product=IS1 family transposase;protein_id=WP_000179198.1;transl_table=11 ##sequence-region NZ_JJLR01000075.1 1 22008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000075.1 RefSeq region 1 22008 . + . ID=NZ_JJLR01000075.1:1..22008;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000075.1 RefSeq gene 1 262 . + . ID=gene-AC57_RS13965;Name=AC57_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13965;old_locus_tag=AC57_2027;partial=true;start_range=.,1 NZ_JJLR01000075.1 Protein Homology CDS 1 262 . + 1 ID=cds-WP_000317683.1-3;Parent=gene-AC57_RS13965;Dbxref=GenBank:WP_000317683.1;Name=WP_000317683.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS13965;partial=true;product=IS1 family transposase;protein_id=WP_000317683.1;start_range=.,1;transl_table=11 NZ_JJLR01000075.1 RefSeq pseudogene 268 995 . + . ID=gene-AC57_RS0124230;Name=AC57_RS0124230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124230;old_locus_tag=AC57_2028;partial=true;pseudo=true;start_range=.,268 NZ_JJLR01000075.1 Protein Homology CDS 268 995 . + 0 ID=cds-AC57_RS0124230;Parent=gene-AC57_RS0124230;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001548650.1;locus_tag=AC57_RS0124230;partial=true;product=beta-L-arabinofuranosidase domain-containing protein;pseudo=true;start_range=.,268;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 1032 4106 . + . ID=gene-AC57_RS13960;Name=AC57_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13960;old_locus_tag=AC57_2029 NZ_JJLR01000075.1 Protein Homology CDS 1032 4106 . + 0 ID=cds-WP_032279965.1;Parent=gene-AC57_RS13960;Dbxref=GenBank:WP_032279965.1;Name=WP_032279965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281525.1;locus_tag=AC57_RS13960;product=alpha-mannosidase;protein_id=WP_032279965.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 4194 5165 . - . ID=gene-AC57_RS13955;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AC57_RS13955;old_locus_tag=AC57_2030 NZ_JJLR01000075.1 Protein Homology CDS 4194 5165 . - 0 ID=cds-WP_000448381.1;Parent=gene-AC57_RS13955;Dbxref=GenBank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AC57_RS13955;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 5285 6607 . - . ID=gene-AC57_RS13950;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AC57_RS13950;old_locus_tag=AC57_2031 NZ_JJLR01000075.1 Protein Homology CDS 5285 6607 . - 0 ID=cds-WP_001184045.1;Parent=gene-AC57_RS13950;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AC57_RS13950;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 6623 7555 . - . ID=gene-AC57_RS13945;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AC57_RS13945;old_locus_tag=AC57_2032 NZ_JJLR01000075.1 Protein Homology CDS 6623 7555 . - 0 ID=cds-WP_001342995.1;Parent=gene-AC57_RS13945;Dbxref=GenBank:WP_001342995.1;Name=WP_001342995.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AC57_RS13945;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_001342995.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 7634 8389 . + . ID=gene-AC57_RS13940;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AC57_RS13940;old_locus_tag=AC57_2033 NZ_JJLR01000075.1 Protein Homology CDS 7634 8389 . + 0 ID=cds-WP_000202996.1;Parent=gene-AC57_RS13940;Dbxref=GenBank:WP_000202996.1;Name=WP_000202996.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AC57_RS13940;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202996.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 8386 9171 . + . ID=gene-AC57_RS13935;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AC57_RS13935;old_locus_tag=AC57_2034 NZ_JJLR01000075.1 Protein Homology CDS 8386 9171 . + 0 ID=cds-WP_000571479.1;Parent=gene-AC57_RS13935;Dbxref=GenBank:WP_000571479.1;Name=WP_000571479.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416373.1;locus_tag=AC57_RS13935;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571479.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 9318 10328 . - . ID=gene-AC57_RS13930;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AC57_RS13930;old_locus_tag=AC57_2035 NZ_JJLR01000075.1 Protein Homology CDS 9318 10328 . - 0 ID=cds-WP_000568519.1;Parent=gene-AC57_RS13930;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AC57_RS13930;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 10337 10948 . - . ID=gene-AC57_RS13925;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AC57_RS13925;old_locus_tag=AC57_2036 NZ_JJLR01000075.1 Protein Homology CDS 10337 10948 . - 0 ID=cds-WP_000580323.1;Parent=gene-AC57_RS13925;Dbxref=GenBank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AC57_RS13925;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 11087 11152 . - . ID=gene-AC57_RS28990;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AC57_RS28990 NZ_JJLR01000075.1 Protein Homology CDS 11087 11152 . - 0 ID=cds-WP_010723105.1;Parent=gene-AC57_RS28990;Dbxref=GenBank:WP_010723105.1;Name=WP_010723105.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AC57_RS28990;product=stress response small protein YobI;protein_id=WP_010723105.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 11223 11825 . + . ID=gene-AC57_RS13920;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=AC57_RS13920;old_locus_tag=AC57_2037 NZ_JJLR01000075.1 Protein Homology CDS 11223 11825 . + 0 ID=cds-WP_001024932.1;Parent=gene-AC57_RS13920;Dbxref=GenBank:WP_001024932.1;Name=WP_001024932.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AC57_RS13920;product=YebB family permuted papain-like enzyme;protein_id=WP_001024932.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 11827 12348 . - . ID=gene-AC57_RS13915;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AC57_RS13915;old_locus_tag=AC57_2038 NZ_JJLR01000075.1 Protein Homology CDS 11827 12348 . - 0 ID=cds-WP_001295503.1;Parent=gene-AC57_RS13915;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AC57_RS13915;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 12383 13123 . - . ID=gene-AC57_RS13910;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AC57_RS13910;old_locus_tag=AC57_2039 NZ_JJLR01000075.1 Protein Homology CDS 12383 13123 . - 0 ID=cds-WP_000907248.1;Parent=gene-AC57_RS13910;Dbxref=GenBank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AC57_RS13910;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 13152 13604 . - . ID=gene-AC57_RS13905;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AC57_RS13905;old_locus_tag=AC57_2040 NZ_JJLR01000075.1 Protein Homology CDS 13152 13604 . - 0 ID=cds-WP_020678468.1;Parent=gene-AC57_RS13905;Dbxref=GenBank:WP_020678468.1;Name=WP_020678468.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AC57_RS13905;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_020678468.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 13722 15494 . - . ID=gene-AC57_RS13900;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AC57_RS13900;old_locus_tag=AC57_2041 NZ_JJLR01000075.1 Protein Homology CDS 13722 15494 . - 0 ID=cds-WP_001258678.1;Parent=gene-AC57_RS13900;Dbxref=GenBank:WP_001258678.1;Name=WP_001258678.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AC57_RS13900;product=aspartate--tRNA ligase;protein_id=WP_001258678.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 15804 16370 . + . ID=gene-AC57_RS13895;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AC57_RS13895;old_locus_tag=AC57_2042 NZ_JJLR01000075.1 Protein Homology CDS 15804 16370 . + 0 ID=cds-WP_000891621.1;Parent=gene-AC57_RS13895;Dbxref=GenBank:WP_000891621.1;Name=WP_000891621.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AC57_RS13895;product=hydrolase;protein_id=WP_000891621.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 16367 17185 . + . ID=gene-AC57_RS13890;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=AC57_RS13890;old_locus_tag=AC57_2043 NZ_JJLR01000075.1 Protein Homology CDS 16367 17185 . + 0 ID=cds-WP_000639274.1;Parent=gene-AC57_RS13890;Dbxref=GenBank:WP_000639274.1;Name=WP_000639274.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=AC57_RS13890;product=DUF72 domain-containing protein;protein_id=WP_000639274.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 17238 17633 . + . ID=gene-AC57_RS13885;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AC57_RS13885;old_locus_tag=AC57_2044 NZ_JJLR01000075.1 Protein Homology CDS 17238 17633 . + 0 ID=cds-WP_000252980.1;Parent=gene-AC57_RS13885;Dbxref=GenBank:WP_000252980.1;Name=WP_000252980.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AC57_RS13885;product=MAPEG family protein;protein_id=WP_000252980.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 17674 18417 . + . ID=gene-AC57_RS13880;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AC57_RS13880;old_locus_tag=AC57_2045 NZ_JJLR01000075.1 Protein Homology CDS 17674 18417 . + 0 ID=cds-WP_032279964.1;Parent=gene-AC57_RS13880;Dbxref=GenBank:WP_032279964.1;Name=WP_032279964.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=AC57_RS13880;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_032279964.1;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 18414 19385 . + . ID=gene-AC57_RS13875;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AC57_RS13875;old_locus_tag=AC57_2046 NZ_JJLR01000075.1 Protein Homology CDS 18414 19385 . + 0 ID=cds-WP_032237829.1;Parent=gene-AC57_RS13875;Dbxref=GenBank:WP_032237829.1;Name=WP_032237829.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310608.1;locus_tag=AC57_RS13875;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_032237829.1;transl_table=11 NZ_JJLR01000075.1 RefSeq pseudogene 19550 21682 . - . ID=gene-AC57_RS13870;Name=torZ;end_range=21682,.;gbkey=Gene;gene=torZ;gene_biotype=pseudogene;locus_tag=AC57_RS13870;old_locus_tag=AC57_2047;partial=true;pseudo=true NZ_JJLR01000075.1 Protein Homology CDS 19550 21682 . - 0 ID=cds-AC57_RS13870;Parent=gene-AC57_RS13870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21682,.;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AC57_RS13870;partial=true;product=trimethylamine N-oxide reductase TorZ;pseudo=true;transl_table=11 NZ_JJLR01000075.1 RefSeq gene 21738 22008 . + . ID=gene-AC57_RS13865;Name=AC57_RS13865;end_range=22008,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13865;old_locus_tag=AC57_2048;partial=true NZ_JJLR01000075.1 Protein Homology CDS 21738 22008 . + 0 ID=cds-WP_000179209.1-3;Parent=gene-AC57_RS13865;Dbxref=GenBank:WP_000179209.1;Name=WP_000179209.1;end_range=22008,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS13865;partial=true;product=IS1-like element transposase;protein_id=WP_000179209.1;transl_table=11 ##sequence-region NZ_JJLR01000076.1 1 4379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000076.1 RefSeq region 1 4379 . + . ID=NZ_JJLR01000076.1:1..4379;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000076.1 RefSeq gene 1 260 . + . ID=gene-AC57_RS13860;Name=AC57_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13860;old_locus_tag=AC57_2049;partial=true;start_range=.,1 NZ_JJLR01000076.1 Protein Homology CDS 1 260 . + 2 ID=cds-WP_000642053.1;Parent=gene-AC57_RS13860;Dbxref=GenBank:WP_000642053.1;Name=WP_000642053.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS13860;partial=true;product=IS1 family transposase;protein_id=WP_000642053.1;start_range=.,1;transl_table=11 NZ_JJLR01000076.1 RefSeq gene 461 1207 . - . ID=gene-AC57_RS13855;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AC57_RS13855;old_locus_tag=AC57_2050 NZ_JJLR01000076.1 Protein Homology CDS 461 1207 . - 0 ID=cds-WP_001185727.1;Parent=gene-AC57_RS13855;Dbxref=GenBank:WP_001185727.1;Name=WP_001185727.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310611.2;locus_tag=AC57_RS13855;product=copper homeostasis protein CutC;protein_id=WP_001185727.1;transl_table=11 NZ_JJLR01000076.1 RefSeq gene 1221 1787 . - . ID=gene-AC57_RS13850;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AC57_RS13850;old_locus_tag=AC57_2051 NZ_JJLR01000076.1 Protein Homology CDS 1221 1787 . - 0 ID=cds-WP_001295504.1;Parent=gene-AC57_RS13850;Dbxref=GenBank:WP_001295504.1;Name=WP_001295504.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AC57_RS13850;product=VOC family protein;protein_id=WP_001295504.1;transl_table=11 NZ_JJLR01000076.1 RefSeq gene 2003 3736 . + . ID=gene-AC57_RS13845;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AC57_RS13845;old_locus_tag=AC57_2052 NZ_JJLR01000076.1 Protein Homology CDS 2003 3736 . + 0 ID=cds-WP_001025322.1;Parent=gene-AC57_RS13845;Dbxref=GenBank:WP_001025322.1;Name=WP_001025322.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AC57_RS13845;product=arginine--tRNA ligase;protein_id=WP_001025322.1;transl_table=11 NZ_JJLR01000076.1 RefSeq gene 3778 3822 . - . ID=gene-AC57_RS30520;Name=yecV;gbkey=Gene;gene=yecV;gene_biotype=protein_coding;locus_tag=AC57_RS30520 NZ_JJLR01000076.1 Protein Homology CDS 3778 3822 . - 0 ID=cds-WP_211180499.1;Parent=gene-AC57_RS30520;Dbxref=GenBank:WP_211180499.1;Name=WP_211180499.1;gbkey=CDS;gene=yecV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AC57_RS30520;product=protein YecV;protein_id=WP_211180499.1;transl_table=11 NZ_JJLR01000076.1 RefSeq pseudogene 3913 4095 . + . ID=gene-AC57_RS13840;Name=AC57_RS13840;end_range=4095,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS13840;old_locus_tag=AC57_2054;partial=true;pseudo=true NZ_JJLR01000076.1 Protein Homology CDS 3913 4095 . + 0 ID=cds-AC57_RS13840;Parent=gene-AC57_RS13840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310614.1;locus_tag=AC57_RS13840;partial=true;product=lysozyme inhibitor LprI family protein;pseudo=true;transl_table=11 NZ_JJLR01000076.1 RefSeq gene 4151 4379 . + . ID=gene-AC57_RS0124235;Name=AC57_RS0124235;end_range=4379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124235;old_locus_tag=AC57_2055;partial=true NZ_JJLR01000076.1 Protein Homology CDS 4151 4379 . + 0 ID=cds-WP_001396637.1-2;Parent=gene-AC57_RS0124235;Dbxref=GenBank:WP_001396637.1;Name=WP_001396637.1;Ontology_term=GO:0006313;end_range=4379,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124235;partial=true;product=IS1 family transposase;protein_id=WP_001396637.1;transl_table=11 ##sequence-region NZ_JJLR01000077.1 1 48915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000077.1 RefSeq region 1 48915 . + . ID=NZ_JJLR01000077.1:1..48915;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000077.1 RefSeq pseudogene 1 290 . + . ID=gene-AC57_RS13835;Name=AC57_RS13835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS13835;old_locus_tag=AC57_2056;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000077.1 Protein Homology CDS 1 290 . + 2 ID=cds-AC57_RS13835;Parent=gene-AC57_RS13835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS13835;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000077.1 RefSeq pseudogene 306 620 . + . ID=gene-AC57_RS0124240;Name=AC57_RS0124240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124240;partial=true;pseudo=true;start_range=.,306 NZ_JJLR01000077.1 Protein Homology CDS 306 620 . + 0 ID=cds-AC57_RS0124240;Parent=gene-AC57_RS0124240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416391.4;locus_tag=AC57_RS0124240;partial=true;product=lysozyme inhibitor LprI family protein;pseudo=true;start_range=.,306;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 740 1132 . - . ID=gene-AC57_RS0124245;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AC57_RS0124245 NZ_JJLR01000077.1 Protein Homology CDS 740 1132 . - 0 ID=cds-WP_001259583.1;Parent=gene-AC57_RS0124245;Dbxref=GenBank:WP_001259583.1;Name=WP_001259583.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AC57_RS0124245;product=flagellar protein FlhE;protein_id=WP_001259583.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 1132 3210 . - . ID=gene-AC57_RS13830;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AC57_RS13830;old_locus_tag=AC57_2058 NZ_JJLR01000077.1 Protein Homology CDS 1132 3210 . - 0 ID=cds-WP_032279734.1;Parent=gene-AC57_RS13830;Dbxref=GenBank:WP_032279734.1;Name=WP_032279734.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AC57_RS13830;product=flagellar biosynthesis protein FlhA;protein_id=WP_032279734.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 3203 4351 . - . ID=gene-AC57_RS13825;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AC57_RS13825;old_locus_tag=AC57_2059 NZ_JJLR01000077.1 Protein Homology CDS 3203 4351 . - 0 ID=cds-WP_001278936.1;Parent=gene-AC57_RS13825;Dbxref=GenBank:WP_001278936.1;Name=WP_001278936.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AC57_RS13825;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278936.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 4553 5197 . - . ID=gene-AC57_RS13820;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AC57_RS13820;old_locus_tag=AC57_2061 NZ_JJLR01000077.1 Protein Homology CDS 4553 5197 . - 0 ID=cds-WP_032237569.1;Parent=gene-AC57_RS13820;Dbxref=GenBank:WP_032237569.1;Name=WP_032237569.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AC57_RS13820;product=protein phosphatase CheZ;protein_id=WP_032237569.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 5208 5597 . - . ID=gene-AC57_RS13815;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AC57_RS13815;old_locus_tag=AC57_2062 NZ_JJLR01000077.1 Protein Homology CDS 5208 5597 . - 0 ID=cds-WP_000763867.1;Parent=gene-AC57_RS13815;Dbxref=GenBank:WP_000763867.1;Name=WP_000763867.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AC57_RS13815;product=chemotaxis response regulator CheY;protein_id=WP_000763867.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 5612 6661 . - . ID=gene-AC57_RS13810;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AC57_RS13810;old_locus_tag=AC57_2063 NZ_JJLR01000077.1 Protein Homology CDS 5612 6661 . - 0 ID=cds-WP_000036378.1;Parent=gene-AC57_RS13810;Dbxref=GenBank:WP_000036378.1;Name=WP_000036378.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AC57_RS13810;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036378.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 6664 7524 . - . ID=gene-AC57_RS13805;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AC57_RS13805;old_locus_tag=AC57_2064 NZ_JJLR01000077.1 Protein Homology CDS 6664 7524 . - 0 ID=cds-WP_000204335.1;Parent=gene-AC57_RS13805;Dbxref=GenBank:WP_000204335.1;Name=WP_000204335.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AC57_RS13805;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204335.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 7543 9144 . - . ID=gene-AC57_RS13800;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AC57_RS13800;old_locus_tag=AC57_2065 NZ_JJLR01000077.1 Protein Homology CDS 7543 9144 . - 0 ID=cds-WP_032285702.1;Parent=gene-AC57_RS13800;Dbxref=GenBank:WP_032285702.1;Name=WP_032285702.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416399.1;locus_tag=AC57_RS13800;product=methyl-accepting chemotaxis protein IV;protein_id=WP_032285702.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 9190 10851 . - . ID=gene-AC57_RS13795;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AC57_RS13795;old_locus_tag=AC57_2066 NZ_JJLR01000077.1 Protein Homology CDS 9190 10851 . - 0 ID=cds-WP_001297437.1;Parent=gene-AC57_RS13795;Dbxref=GenBank:WP_001297437.1;Name=WP_001297437.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AC57_RS13795;product=methyl-accepting chemotaxis protein II;protein_id=WP_001297437.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 10996 11499 . - . ID=gene-AC57_RS13790;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AC57_RS13790;old_locus_tag=AC57_2067 NZ_JJLR01000077.1 Protein Homology CDS 10996 11499 . - 0 ID=cds-WP_000147302.1;Parent=gene-AC57_RS13790;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AC57_RS13790;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 11520 13484 . - . ID=gene-AC57_RS13785;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AC57_RS13785;old_locus_tag=AC57_2068 NZ_JJLR01000077.1 Protein Homology CDS 11520 13484 . - 0 ID=cds-WP_001300654.1;Parent=gene-AC57_RS13785;Dbxref=GenBank:WP_001300654.1;Name=WP_001300654.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283911.1;locus_tag=AC57_RS13785;product=chemotaxis protein CheA;protein_id=WP_001300654.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 13489 14415 . - . ID=gene-AC57_RS13780;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AC57_RS13780;old_locus_tag=AC57_2069 NZ_JJLR01000077.1 Protein Homology CDS 13489 14415 . - 0 ID=cds-WP_032237566.1;Parent=gene-AC57_RS13780;Dbxref=GenBank:WP_032237566.1;Name=WP_032237566.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AC57_RS13780;product=flagellar motor protein MotB;protein_id=WP_032237566.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 14412 15299 . - . ID=gene-AC57_RS13775;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AC57_RS13775;old_locus_tag=AC57_2070 NZ_JJLR01000077.1 Protein Homology CDS 14412 15299 . - 0 ID=cds-WP_032237565.1;Parent=gene-AC57_RS13775;Dbxref=GenBank:WP_032237565.1;Name=WP_032237565.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416404.1;locus_tag=AC57_RS13775;product=flagellar motor stator protein MotA;protein_id=WP_032237565.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 15426 16004 . - . ID=gene-AC57_RS13770;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AC57_RS13770;old_locus_tag=AC57_2071 NZ_JJLR01000077.1 Protein Homology CDS 15426 16004 . - 0 ID=cds-WP_001291603.1;Parent=gene-AC57_RS13770;Dbxref=GenBank:WP_001291603.1;Name=WP_001291603.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AC57_RS13770;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 16007 16357 . - . ID=gene-AC57_RS13765;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AC57_RS13765;old_locus_tag=AC57_2072 NZ_JJLR01000077.1 Protein Homology CDS 16007 16357 . - 0 ID=cds-WP_001295647.1;Parent=gene-AC57_RS13765;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AC57_RS13765;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 17136 17564 . + . ID=gene-AC57_RS13760;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AC57_RS13760;old_locus_tag=AC57_2074 NZ_JJLR01000077.1 Protein Homology CDS 17136 17564 . + 0 ID=cds-WP_000122426.1;Parent=gene-AC57_RS13760;Dbxref=GenBank:WP_000122426.1;Name=WP_000122426.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416409.1;locus_tag=AC57_RS13760;product=universal stress protein UspC;protein_id=WP_000122426.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 17571 18995 . - . ID=gene-AC57_RS13755;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AC57_RS13755;old_locus_tag=AC57_2075 NZ_JJLR01000077.1 Protein Homology CDS 17571 18995 . - 0 ID=cds-WP_032237564.1;Parent=gene-AC57_RS13755;Dbxref=GenBank:WP_032237564.1;Name=WP_032237564.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AC57_RS13755;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_032237564.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 18970 19770 . - . ID=gene-AC57_RS13750;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AC57_RS13750;old_locus_tag=AC57_2076 NZ_JJLR01000077.1 Protein Homology CDS 18970 19770 . - 0 ID=cds-WP_032237563.1;Parent=gene-AC57_RS13750;Dbxref=GenBank:WP_032237563.1;Name=WP_032237563.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416411.1;locus_tag=AC57_RS13750;product=trehalose-phosphatase;protein_id=WP_032237563.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 19937 20923 . - . ID=gene-AC57_RS13745;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AC57_RS13745;old_locus_tag=AC57_2077 NZ_JJLR01000077.1 Protein Homology CDS 19937 20923 . - 0 ID=cds-WP_000100205.1;Parent=gene-AC57_RS13745;Dbxref=GenBank:WP_000100205.1;Name=WP_000100205.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AC57_RS13745;product=arabinose ABC transporter permease AraH;protein_id=WP_000100205.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 20938 22452 . - . ID=gene-AC57_RS13740;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AC57_RS13740;old_locus_tag=AC57_2078 NZ_JJLR01000077.1 Protein Homology CDS 20938 22452 . - 0 ID=cds-WP_001187819.1;Parent=gene-AC57_RS13740;Dbxref=GenBank:WP_001187819.1;Name=WP_001187819.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AC57_RS13740;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001187819.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 22522 23511 . - . ID=gene-AC57_RS13735;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=AC57_RS13735;old_locus_tag=AC57_2079 NZ_JJLR01000077.1 Protein Homology CDS 22522 23511 . - 0 ID=cds-WP_000548675.1;Parent=gene-AC57_RS13735;Dbxref=GenBank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=AC57_RS13735;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 24308 24811 . + . ID=gene-AC57_RS13730;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AC57_RS13730;old_locus_tag=AC57_2080 NZ_JJLR01000077.1 Protein Homology CDS 24308 24811 . + 0 ID=cds-WP_000179469.1;Parent=gene-AC57_RS13730;Dbxref=GenBank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AC57_RS13730;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 24890 25141 . - . ID=gene-AC57_RS13725;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AC57_RS13725;old_locus_tag=AC57_2081 NZ_JJLR01000077.1 Protein Homology CDS 24890 25141 . - 0 ID=cds-WP_000082127.1;Parent=gene-AC57_RS13725;Dbxref=GenBank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AC57_RS13725;product=DUF2766 family protein YecJ;protein_id=WP_000082127.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 25256 25342 . - . ID=gene-AC57_RS29000;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AC57_RS29000 NZ_JJLR01000077.1 Protein Homology CDS 25256 25342 . - 0 ID=cds-WP_010723106.1;Parent=gene-AC57_RS29000;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AC57_RS29000;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 25605 25928 . + . ID=gene-AC57_RS0124250;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AC57_RS0124250;old_locus_tag=AC57_2083 NZ_JJLR01000077.1 Protein Homology CDS 25605 25928 . + 0 ID=cds-WP_001237875.1;Parent=gene-AC57_RS0124250;Dbxref=GenBank:WP_001237875.1;Name=WP_001237875.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707794.1;locus_tag=AC57_RS0124250;product=YecR-like lipofamily protein;protein_id=WP_001237875.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 26100 26597 . + . ID=gene-AC57_RS13715;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AC57_RS13715;old_locus_tag=AC57_2085 NZ_JJLR01000077.1 Protein Homology CDS 26100 26597 . + 0 ID=cds-WP_000917208.1;Parent=gene-AC57_RS13715;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AC57_RS13715;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 26635 26874 . - . ID=gene-AC57_RS13710;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AC57_RS13710;old_locus_tag=AC57_2086 NZ_JJLR01000077.1 Protein Homology CDS 26635 26874 . - 0 ID=cds-WP_000377224.1;Parent=gene-AC57_RS13710;Dbxref=GenBank:WP_000377224.1;Name=WP_000377224.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AC57_RS13710;product=YecH family metal-binding protein;protein_id=WP_000377224.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 27063 28274 . + . ID=gene-AC57_RS13705;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AC57_RS13705;old_locus_tag=AC57_2088 NZ_JJLR01000077.1 Protein Homology CDS 27063 28274 . + 0 ID=cds-WP_000797573.1;Parent=gene-AC57_RS13705;Dbxref=GenBank:WP_000797573.1;Name=WP_000797573.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310642.1;locus_tag=AC57_RS13705;product=tyrosine transporter TyrP;protein_id=WP_000797573.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 28336 29001 . - . ID=gene-AC57_RS13700;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AC57_RS13700;old_locus_tag=AC57_2089 NZ_JJLR01000077.1 Protein Homology CDS 28336 29001 . - 0 ID=cds-WP_000847902.1;Parent=gene-AC57_RS13700;Dbxref=GenBank:WP_000847902.1;Name=WP_000847902.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416421.1;locus_tag=AC57_RS13700;product=UPF0149 family protein YecA;protein_id=WP_000847902.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 29197 29283 . - . ID=gene-AC57_RS13695;Name=AC57_RS13695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13695;old_locus_tag=AC57_2090 NZ_JJLR01000077.1 tRNAscan-SE tRNA 29197 29283 . - . ID=rna-AC57_RS13695;Parent=gene-AC57_RS13695;anticodon=(pos:complement(29247..29249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13695;product=tRNA-Leu NZ_JJLR01000077.1 tRNAscan-SE exon 29197 29283 . - . ID=exon-AC57_RS13695-1;Parent=rna-AC57_RS13695;anticodon=(pos:complement(29247..29249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13695;product=tRNA-Leu NZ_JJLR01000077.1 RefSeq gene 29296 29369 . - . ID=gene-AC57_RS13690;Name=AC57_RS13690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13690;old_locus_tag=AC57_2091 NZ_JJLR01000077.1 tRNAscan-SE tRNA 29296 29369 . - . ID=rna-AC57_RS13690;Parent=gene-AC57_RS13690;anticodon=(pos:complement(29335..29337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13690;product=tRNA-Cys NZ_JJLR01000077.1 tRNAscan-SE exon 29296 29369 . - . ID=exon-AC57_RS13690-1;Parent=rna-AC57_RS13690;anticodon=(pos:complement(29335..29337));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13690;product=tRNA-Cys NZ_JJLR01000077.1 RefSeq gene 29423 29498 . - . ID=gene-AC57_RS13685;Name=AC57_RS13685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13685;old_locus_tag=AC57_2092 NZ_JJLR01000077.1 tRNAscan-SE tRNA 29423 29498 . - . ID=rna-AC57_RS13685;Parent=gene-AC57_RS13685;anticodon=(pos:complement(29463..29465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13685;product=tRNA-Gly NZ_JJLR01000077.1 tRNAscan-SE exon 29423 29498 . - . ID=exon-AC57_RS13685-1;Parent=rna-AC57_RS13685;anticodon=(pos:complement(29463..29465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13685;product=tRNA-Gly NZ_JJLR01000077.1 RefSeq gene 29650 30198 . - . ID=gene-AC57_RS13680;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AC57_RS13680;old_locus_tag=AC57_2093 NZ_JJLR01000077.1 Protein Homology CDS 29650 30198 . - 0 ID=cds-WP_032279737.1;Parent=gene-AC57_RS13680;Dbxref=GenBank:WP_032279737.1;Name=WP_032279737.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AC57_RS13680;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_032279737.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 30255 32087 . - . ID=gene-AC57_RS13675;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AC57_RS13675;old_locus_tag=AC57_2094 NZ_JJLR01000077.1 Protein Homology CDS 30255 32087 . - 0 ID=cds-WP_001283424.1;Parent=gene-AC57_RS13675;Dbxref=GenBank:WP_001283424.1;Name=WP_001283424.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AC57_RS13675;product=excinuclease ABC subunit UvrC;protein_id=WP_001283424.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 32084 32740 . - . ID=gene-AC57_RS13670;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AC57_RS13670;old_locus_tag=AC57_2095 NZ_JJLR01000077.1 Protein Homology CDS 32084 32740 . - 0 ID=cds-WP_000611328.1;Parent=gene-AC57_RS13670;Dbxref=GenBank:WP_000611328.1;Name=WP_000611328.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=AC57_RS13670;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611328.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 32882 32998 . + . ID=gene-AC57_RS31130;Name=AC57_RS31130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31130;old_locus_tag=AC57_2096 NZ_JJLR01000077.1 Protein Homology CDS 32882 32998 . + 0 ID=cds-WP_001302039.1;Parent=gene-AC57_RS31130;Dbxref=GenBank:WP_001302039.1;Name=WP_001302039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001302039.1;locus_tag=AC57_RS31130;product=hypothetical protein;protein_id=WP_001302039.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 33036 33212 . + . ID=gene-AC57_RS29810;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AC57_RS29810 NZ_JJLR01000077.1 Protein Homology CDS 33036 33212 . + 0 ID=cds-WP_000590344.1;Parent=gene-AC57_RS29810;Dbxref=GenBank:WP_000590344.1;Name=WP_000590344.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AC57_RS29810;product=protein YecU;protein_id=WP_000590344.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 33199 33423 . + . ID=gene-AC57_RS13665;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AC57_RS13665;old_locus_tag=AC57_2097 NZ_JJLR01000077.1 Protein Homology CDS 33199 33423 . + 0 ID=cds-WP_000106474.1;Parent=gene-AC57_RS13665;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AC57_RS13665;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 33491 34213 . - . ID=gene-AC57_RS13660;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AC57_RS13660;old_locus_tag=AC57_2098 NZ_JJLR01000077.1 Protein Homology CDS 33491 34213 . - 0 ID=cds-WP_001154273.1;Parent=gene-AC57_RS13660;Dbxref=GenBank:WP_001154273.1;Name=WP_001154273.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AC57_RS13660;product=transcriptional regulator SdiA;protein_id=WP_001154273.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 34443 35195 . - . ID=gene-AC57_RS13655;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AC57_RS13655;old_locus_tag=AC57_2099 NZ_JJLR01000077.1 Protein Homology CDS 34443 35195 . - 0 ID=cds-WP_001272994.1;Parent=gene-AC57_RS13655;Dbxref=GenBank:WP_001272994.1;Name=WP_001272994.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AC57_RS13655;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001272994.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 35192 35860 . - . ID=gene-AC57_RS13650;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AC57_RS13650;old_locus_tag=AC57_2100 NZ_JJLR01000077.1 Protein Homology CDS 35192 35860 . - 0 ID=cds-WP_032174101.1;Parent=gene-AC57_RS13650;Dbxref=GenBank:WP_032174101.1;Name=WP_032174101.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AC57_RS13650;product=cystine ABC transporter permease;protein_id=WP_032174101.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 35875 36861 . - . ID=gene-AC57_RS13645;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AC57_RS13645;old_locus_tag=AC57_2101 NZ_JJLR01000077.1 Protein Homology CDS 35875 36861 . - 0 ID=cds-WP_001128215.1;Parent=gene-AC57_RS13645;Dbxref=GenBank:WP_001128215.1;Name=WP_001128215.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AC57_RS13645;product=D-cysteine desulfhydrase;protein_id=WP_001128215.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 36966 37766 . - . ID=gene-AC57_RS13640;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AC57_RS13640;old_locus_tag=AC57_2102 NZ_JJLR01000077.1 Protein Homology CDS 36966 37766 . - 0 ID=cds-WP_032237560.1;Parent=gene-AC57_RS13640;Dbxref=GenBank:WP_032237560.1;Name=WP_032237560.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AC57_RS13640;product=cystine ABC transporter substrate-binding protein;protein_id=WP_032237560.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 37854 38405 . - . ID=gene-AC57_RS13635;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AC57_RS13635;old_locus_tag=AC57_2103 NZ_JJLR01000077.1 Protein Homology CDS 37854 38405 . - 0 ID=cds-WP_001302103.1;Parent=gene-AC57_RS13635;Dbxref=GenBank:WP_001302103.1;Name=WP_001302103.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AC57_RS13635;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_001302103.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 38451 39170 . - . ID=gene-AC57_RS13630;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AC57_RS13630;old_locus_tag=AC57_2104 NZ_JJLR01000077.1 Protein Homology CDS 38451 39170 . - 0 ID=cds-WP_001478231.1;Parent=gene-AC57_RS13630;Dbxref=GenBank:WP_001478231.1;Name=WP_001478231.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AC57_RS13630;product=RNA polymerase sigma factor FliA;protein_id=WP_001478231.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 39490 41208 . - . ID=gene-AC57_RS13625;Name=AC57_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13625;old_locus_tag=AC57_2106 NZ_JJLR01000077.1 Protein Homology CDS 39490 41208 . - 0 ID=cds-WP_000079747.1;Parent=gene-AC57_RS13625;Dbxref=GenBank:WP_000079747.1;Name=WP_000079747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602758.1;locus_tag=AC57_RS13625;product=FliC/FljB family flagellin;protein_id=WP_000079747.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 41474 42880 . + . ID=gene-AC57_RS13620;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AC57_RS13620;old_locus_tag=AC57_2107 NZ_JJLR01000077.1 Protein Homology CDS 41474 42880 . + 0 ID=cds-WP_000146781.1;Parent=gene-AC57_RS13620;Dbxref=GenBank:WP_000146781.1;Name=WP_000146781.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=AC57_RS13620;product=flagellar filament capping protein FliD;protein_id=WP_000146781.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 42905 43315 . + . ID=gene-AC57_RS13615;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AC57_RS13615;old_locus_tag=AC57_2108 NZ_JJLR01000077.1 Protein Homology CDS 42905 43315 . + 0 ID=cds-WP_000270663.1;Parent=gene-AC57_RS13615;Dbxref=GenBank:WP_000270663.1;Name=WP_000270663.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AC57_RS13615;product=flagellar export chaperone FliS;protein_id=WP_000270663.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 43315 43680 . + . ID=gene-AC57_RS13610;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AC57_RS13610;old_locus_tag=AC57_2109 NZ_JJLR01000077.1 Protein Homology CDS 43315 43680 . + 0 ID=cds-WP_001015022.1;Parent=gene-AC57_RS13610;Dbxref=GenBank:WP_001015022.1;Name=WP_001015022.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001015018.1;locus_tag=AC57_RS13610;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015022.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 43758 45245 . + . ID=gene-AC57_RS13605;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AC57_RS13605;old_locus_tag=AC57_2110 NZ_JJLR01000077.1 Protein Homology CDS 43758 45245 . + 0 ID=cds-WP_032237558.1;Parent=gene-AC57_RS13605;Dbxref=GenBank:WP_032237558.1;Name=WP_032237558.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AC57_RS13605;product=alpha-amylase;protein_id=WP_032237558.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 45279 45692 . - . ID=gene-AC57_RS13600;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AC57_RS13600;old_locus_tag=AC57_2111 NZ_JJLR01000077.1 Protein Homology CDS 45279 45692 . - 0 ID=cds-WP_001295642.1;Parent=gene-AC57_RS13600;Dbxref=GenBank:WP_001295642.1;Name=WP_001295642.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AC57_RS13600;product=lipoprotein YedD;protein_id=WP_001295642.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 45879 47084 . + . ID=gene-AC57_RS13595;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AC57_RS13595;old_locus_tag=AC57_2112 NZ_JJLR01000077.1 Protein Homology CDS 45879 47084 . + 0 ID=cds-WP_000118911.1;Parent=gene-AC57_RS13595;Dbxref=GenBank:WP_000118911.1;Name=WP_000118911.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AC57_RS13595;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118911.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 47081 47314 . + . ID=gene-AC57_RS13590;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AC57_RS13590;old_locus_tag=AC57_2113 NZ_JJLR01000077.1 Protein Homology CDS 47081 47314 . + 0 ID=cds-WP_000789493.1;Parent=gene-AC57_RS13590;Dbxref=GenBank:WP_000789493.1;Name=WP_000789493.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AC57_RS13590;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000789493.1;transl_table=11 NZ_JJLR01000077.1 RefSeq gene 47421 48092 . + . ID=gene-AC57_RS13585;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=AC57_RS13585;old_locus_tag=AC57_2114 NZ_JJLR01000077.1 Protein Homology CDS 47421 48092 . + 0 ID=cds-WP_032237556.1;Parent=gene-AC57_RS13585;Dbxref=GenBank:WP_032237556.1;Name=WP_032237556.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AC57_RS13585;product=SOS response-associated peptidase;protein_id=WP_032237556.1;transl_table=11 NZ_JJLR01000077.1 RefSeq pseudogene 48167 48576 . - . ID=gene-AC57_RS31135;Name=AC57_RS31135;end_range=48576,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31135;partial=true;pseudo=true NZ_JJLR01000077.1 Protein Homology CDS 48167 48576 . - 0 ID=cds-AC57_RS31135;Parent=gene-AC57_RS31135;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=48576,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001695252.1;locus_tag=AC57_RS31135;partial=true;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000077.1 RefSeq pseudogene 48582 48915 . - . ID=gene-AC57_RS13580;Name=AC57_RS13580;end_range=48915,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS13580;old_locus_tag=AC57_2116;partial=true;pseudo=true NZ_JJLR01000077.1 Protein Homology CDS 48582 48915 . - 1 ID=cds-AC57_RS13580;Parent=gene-AC57_RS13580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=48915,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS13580;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000078.1 1 21561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000078.1 RefSeq region 1 21561 . + . ID=NZ_JJLR01000078.1:1..21561;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000078.1 RefSeq gene 1 186 . - . ID=gene-AC57_RS13575;Name=AC57_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13575;old_locus_tag=AC57_2117;partial=true;start_range=.,1 NZ_JJLR01000078.1 Protein Homology CDS 1 186 . - 0 ID=cds-WP_001397581.1-2;Parent=gene-AC57_RS13575;Dbxref=GenBank:WP_001397581.1;Name=WP_001397581.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=AC57_RS13575;partial=true;product=IS1 family transposase;protein_id=WP_001397581.1;start_range=.,1;transl_table=11 NZ_JJLR01000078.1 RefSeq pseudogene 243 635 . + . ID=gene-AC57_RS13570;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=pseudogene;locus_tag=AC57_RS13570;old_locus_tag=AC57_2118;partial=true;pseudo=true;start_range=.,243 NZ_JJLR01000078.1 Protein Homology CDS 243 635 . + 0 ID=cds-AC57_RS13570;Parent=gene-AC57_RS13570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310717.1;locus_tag=AC57_RS13570;partial=true;product=transcriptional regulator RcsA;pseudo=true;start_range=.,243;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 679 867 . - . ID=gene-AC57_RS13565;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AC57_RS13565;old_locus_tag=AC57_2119 NZ_JJLR01000078.1 Protein Homology CDS 679 867 . - 0 ID=cds-WP_000867217.1;Parent=gene-AC57_RS13565;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AC57_RS13565;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 1030 1257 . + . ID=gene-AC57_RS13560;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AC57_RS13560;old_locus_tag=AC57_2120 NZ_JJLR01000078.1 Protein Homology CDS 1030 1257 . + 0 ID=cds-WP_000844800.1;Parent=gene-AC57_RS13560;Dbxref=GenBank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AC57_RS13560;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 1555 2370 . + . ID=gene-AC57_RS13555;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AC57_RS13555;old_locus_tag=AC57_2121 NZ_JJLR01000078.1 Protein Homology CDS 1555 2370 . + 0 ID=cds-WP_032279895.1;Parent=gene-AC57_RS13555;Dbxref=GenBank:WP_032279895.1;Name=WP_032279895.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AC57_RS13555;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_032279895.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 2367 4061 . - . ID=gene-AC57_RS13550;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=AC57_RS13550;old_locus_tag=AC57_2122 NZ_JJLR01000078.1 Protein Homology CDS 2367 4061 . - 0 ID=cds-WP_077756436.1;Parent=gene-AC57_RS13550;Dbxref=GenBank:WP_077756436.1;Name=WP_077756436.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310721.1;locus_tag=AC57_RS13550;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_077756436.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 4299 4481 . - . ID=gene-AC57_RS13545;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AC57_RS13545;old_locus_tag=AC57_2123 NZ_JJLR01000078.1 Protein Homology CDS 4299 4481 . - 0 ID=cds-WP_000009306.1;Parent=gene-AC57_RS13545;Dbxref=GenBank:WP_000009306.1;Name=WP_000009306.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AC57_RS13545;product=YodC family protein;protein_id=WP_000009306.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 4560 5477 . - . ID=gene-AC57_RS13540;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AC57_RS13540;old_locus_tag=AC57_2124 NZ_JJLR01000078.1 Protein Homology CDS 4560 5477 . - 0 ID=cds-WP_000922683.1;Parent=gene-AC57_RS13540;Dbxref=GenBank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AC57_RS13540;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 5650 6570 . + . ID=gene-AC57_RS13535;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AC57_RS13535;old_locus_tag=AC57_2125 NZ_JJLR01000078.1 Protein Homology CDS 5650 6570 . + 0 ID=cds-WP_001212226.1;Parent=gene-AC57_RS13535;Dbxref=GenBank:WP_001212226.1;Name=WP_001212226.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AC57_RS13535;product=drug/metabolite exporter YedA;protein_id=WP_001212226.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 6559 7029 . - . ID=gene-AC57_RS13530;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AC57_RS13530;old_locus_tag=AC57_2126 NZ_JJLR01000078.1 Protein Homology CDS 6559 7029 . - 0 ID=cds-WP_000786004.1;Parent=gene-AC57_RS13530;Dbxref=GenBank:WP_000786004.1;Name=WP_000786004.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AC57_RS13530;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786004.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 7010 8428 . - . ID=gene-AC57_RS13525;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AC57_RS13525;old_locus_tag=AC57_2127 NZ_JJLR01000078.1 Protein Homology CDS 7010 8428 . - 0 ID=cds-WP_001157230.1;Parent=gene-AC57_RS13525;Dbxref=GenBank:WP_001157230.1;Name=WP_001157230.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AC57_RS13525;product=DNA-cytosine methyltransferase;protein_id=WP_001157230.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 8495 9190 . - . ID=gene-AC57_RS13520;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AC57_RS13520;old_locus_tag=AC57_2128 NZ_JJLR01000078.1 Protein Homology CDS 8495 9190 . - 0 ID=cds-WP_032237843.1;Parent=gene-AC57_RS13520;Dbxref=GenBank:WP_032237843.1;Name=WP_032237843.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416471.1;locus_tag=AC57_RS13520;product=phosphohydrolase;protein_id=WP_032237843.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 9230 9511 . - . ID=gene-AC57_RS13515;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AC57_RS13515;old_locus_tag=AC57_2129 NZ_JJLR01000078.1 Protein Homology CDS 9230 9511 . - 0 ID=cds-WP_001297704.1;Parent=gene-AC57_RS13515;Dbxref=GenBank:WP_001297704.1;Name=WP_001297704.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AC57_RS13515;product=cell division protein DrpB;protein_id=WP_001297704.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 10162 11235 . + . ID=gene-AC57_RS13510;Name=AC57_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13510;old_locus_tag=AC57_2130 NZ_JJLR01000078.1 Protein Homology CDS 10162 11235 . + 0 ID=cds-WP_000824364.1;Parent=gene-AC57_RS13510;Dbxref=GenBank:WP_000824364.1;Name=WP_000824364.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824385.1;locus_tag=AC57_RS13510;product=porin;protein_id=WP_000824364.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 11375 11569 . - . ID=gene-AC57_RS29820;Name=AC57_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29820 NZ_JJLR01000078.1 Protein Homology CDS 11375 11569 . - 0 ID=cds-WP_001402296.1;Parent=gene-AC57_RS29820;Dbxref=GenBank:WP_001402296.1;Name=WP_001402296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353128.1;locus_tag=AC57_RS29820;product=hypothetical protein;protein_id=WP_001402296.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 11828 12679 . + . ID=gene-AC57_RS13505;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AC57_RS13505;old_locus_tag=AC57_2131 NZ_JJLR01000078.1 Protein Homology CDS 11828 12679 . + 0 ID=cds-WP_000218214.1;Parent=gene-AC57_RS13505;Dbxref=GenBank:WP_000218214.1;Name=WP_000218214.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AC57_RS13505;product=glyoxalase III HchA;protein_id=WP_000218214.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 12787 14145 . - . ID=gene-AC57_RS13500;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AC57_RS13500;old_locus_tag=AC57_2132 NZ_JJLR01000078.1 Protein Homology CDS 12787 14145 . - 0 ID=cds-WP_032279893.1;Parent=gene-AC57_RS13500;Dbxref=GenBank:WP_032279893.1;Name=WP_032279893.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=AC57_RS13500;product=two-component system sensor histidine kinase HprS;protein_id=WP_032279893.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 14145 14816 . - . ID=gene-AC57_RS13495;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AC57_RS13495;old_locus_tag=AC57_2133 NZ_JJLR01000078.1 Protein Homology CDS 14145 14816 . - 0 ID=cds-WP_001339045.1;Parent=gene-AC57_RS13495;Dbxref=GenBank:WP_001339045.1;Name=WP_001339045.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AC57_RS13495;product=response regulator transcription factor HprR;protein_id=WP_001339045.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 14949 15362 . + . ID=gene-AC57_RS13490;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AC57_RS13490;old_locus_tag=AC57_2134 NZ_JJLR01000078.1 Protein Homology CDS 14949 15362 . + 0 ID=cds-WP_000920127.1;Parent=gene-AC57_RS13490;Dbxref=GenBank:WP_000920127.1;Name=WP_000920127.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707855.1;locus_tag=AC57_RS13490;product=hydroxyisourate hydrolase;protein_id=WP_000920127.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 15471 16475 . + . ID=gene-AC57_RS13485;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AC57_RS13485;old_locus_tag=AC57_2135 NZ_JJLR01000078.1 Protein Homology CDS 15471 16475 . + 0 ID=cds-WP_000740094.1;Parent=gene-AC57_RS13485;Dbxref=GenBank:WP_000740094.1;Name=WP_000740094.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AC57_RS13485;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_000740094.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 16476 17111 . + . ID=gene-AC57_RS13480;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AC57_RS13480;old_locus_tag=AC57_2136 NZ_JJLR01000078.1 Protein Homology CDS 16476 17111 . + 0 ID=cds-WP_001240105.1;Parent=gene-AC57_RS13480;Dbxref=GenBank:WP_001240105.1;Name=WP_001240105.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=AC57_RS13480;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240105.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 17368 18018 . + . ID=gene-AC57_RS13475;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AC57_RS13475;old_locus_tag=AC57_2137 NZ_JJLR01000078.1 Protein Homology CDS 17368 18018 . + 0 ID=cds-WP_001007759.1;Parent=gene-AC57_RS13475;Dbxref=GenBank:WP_001007759.1;Name=WP_001007759.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AC57_RS13475;product=metal-binding protein ZinT;protein_id=WP_001007759.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 18363 18893 . + . ID=gene-AC57_RS13470;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=AC57_RS13470;old_locus_tag=AC57_2138 NZ_JJLR01000078.1 Protein Homology CDS 18363 18893 . + 0 ID=cds-WP_001079058.1;Parent=gene-AC57_RS13470;Dbxref=GenBank:WP_001079058.1;Name=WP_001079058.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yodB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=AC57_RS13470;product=cytochrome b;protein_id=WP_001079058.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 19463 19552 . - . ID=gene-AC57_RS13465;Name=AC57_RS13465;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13465;old_locus_tag=AC57_2139 NZ_JJLR01000078.1 tRNAscan-SE tRNA 19463 19552 . - . ID=rna-AC57_RS13465;Parent=gene-AC57_RS13465;anticodon=(pos:complement(19516..19518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13465;product=tRNA-Ser NZ_JJLR01000078.1 tRNAscan-SE exon 19463 19552 . - . ID=exon-AC57_RS13465-1;Parent=rna-AC57_RS13465;anticodon=(pos:complement(19516..19518));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13465;product=tRNA-Ser NZ_JJLR01000078.1 RefSeq gene 19646 20443 . + . ID=gene-AC57_RS13460;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AC57_RS13460;old_locus_tag=AC57_2140 NZ_JJLR01000078.1 Protein Homology CDS 19646 20443 . + 0 ID=cds-WP_032237848.1;Parent=gene-AC57_RS13460;Dbxref=GenBank:WP_032237848.1;Name=WP_032237848.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AC57_RS13460;product=DgsA anti-repressor MtfA;protein_id=WP_032237848.1;transl_table=11 NZ_JJLR01000078.1 RefSeq gene 20544 20619 . + . ID=gene-AC57_RS13455;Name=AC57_RS13455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13455;old_locus_tag=AC57_2141 NZ_JJLR01000078.1 tRNAscan-SE tRNA 20544 20619 . + . ID=rna-AC57_RS13455;Parent=gene-AC57_RS13455;anticodon=(pos:20577..20579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13455;product=tRNA-Asn NZ_JJLR01000078.1 tRNAscan-SE exon 20544 20619 . + . ID=exon-AC57_RS13455-1;Parent=rna-AC57_RS13455;anticodon=(pos:20577..20579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13455;product=tRNA-Asn NZ_JJLR01000078.1 RefSeq gene 20867 21561 . - . ID=gene-AC57_RS13450;Name=AC57_RS13450;end_range=21561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13450;old_locus_tag=AC57_2142;partial=true NZ_JJLR01000078.1 Protein Homology CDS 21315 21561 . - 0 ID=cds-WP_249401509.1;Parent=gene-AC57_RS13450;Dbxref=GenBank:WP_249401509.1;Name=WP_249401509.1;Note=programmed frameshift;Ontology_term=GO:0004803;end_range=21561,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS13450;partial=true;product=IS1 family transposase;protein_id=WP_249401509.1;transl_table=11 NZ_JJLR01000078.1 Protein Homology CDS 20867 21315 . - 2 ID=cds-WP_249401509.1;Parent=gene-AC57_RS13450;Dbxref=GenBank:WP_249401509.1;Name=WP_249401509.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS13450;partial=true;product=IS1 family transposase;protein_id=WP_249401509.1;transl_table=11 ##sequence-region NZ_JJLR01000079.1 1 38899 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000079.1 RefSeq region 1 38899 . + . ID=NZ_JJLR01000079.1:1..38899;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000079.1 RefSeq gene 1 203 . + . ID=gene-AC57_RS13445;Name=AC57_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13445;old_locus_tag=AC57_2143;partial=true;start_range=.,1 NZ_JJLR01000079.1 Protein Homology CDS 1 203 . + 2 ID=cds-WP_001666051.1;Parent=gene-AC57_RS13445;Dbxref=GenBank:WP_001666051.1;Name=WP_001666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC57_RS13445;partial=true;product=IS66 family transposase;protein_id=WP_001666051.1;start_range=.,1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 259 609 . - . ID=gene-AC57_RS13440;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS13440;old_locus_tag=AC57_2144 NZ_JJLR01000079.1 Protein Homology CDS 259 609 . - 0 ID=cds-WP_000624722.1;Parent=gene-AC57_RS13440;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC57_RS13440;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 606 1031 . - . ID=gene-AC57_RS13435;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS13435;old_locus_tag=AC57_2145 NZ_JJLR01000079.1 Protein Homology CDS 606 1031 . - 0 ID=cds-WP_000422741.1;Parent=gene-AC57_RS13435;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC57_RS13435;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLR01000079.1 RefSeq pseudogene 1183 1849 . + . ID=gene-AC57_RS0124285;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC57_RS0124285;pseudo=true NZ_JJLR01000079.1 Protein Homology CDS 1183 1849 . + 0 ID=cds-AC57_RS0124285;Parent=gene-AC57_RS0124285;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311873.1;locus_tag=AC57_RS0124285;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11 NZ_JJLR01000079.1 RefSeq pseudogene 1900 2191 . + . ID=gene-AC57_RS0124290;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AC57_RS0124290;pseudo=true NZ_JJLR01000079.1 Protein Homology CDS 1900 2191 . + 0 ID=cds-AC57_RS0124290;Parent=gene-AC57_RS0124290;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC57_RS0124290;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 NZ_JJLR01000079.1 RefSeq pseudogene 2211 3814 . + . ID=gene-AC57_RS27210;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AC57_RS27210;pseudo=true NZ_JJLR01000079.1 Protein Homology CDS 2211 3814 . + 0 ID=cds-AC57_RS27210;Parent=gene-AC57_RS27210;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611684.1;locus_tag=AC57_RS27210;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000079.1 RefSeq pseudogene 3869 4840 . + . ID=gene-AC57_RS0124305;Name=AC57_RS0124305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124305;old_locus_tag=AC57_2152;partial=true;pseudo=true;start_range=.,3869 NZ_JJLR01000079.1 Protein Homology CDS 3869 4840 . + 0 ID=cds-AC57_RS0124305;Parent=gene-AC57_RS0124305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=AC57_RS0124305;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,3869;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 5034 6338 . - . ID=gene-AC57_RS13425;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=AC57_RS13425;old_locus_tag=AC57_2153 NZ_JJLR01000079.1 Protein Homology CDS 5034 6338 . - 0 ID=cds-WP_000703045.1;Parent=gene-AC57_RS13425;Dbxref=GenBank:WP_000703045.1;Name=WP_000703045.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=AC57_RS13425;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_000703045.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 6366 7646 . - . ID=gene-AC57_RS13420;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=AC57_RS13420;old_locus_tag=AC57_2154 NZ_JJLR01000079.1 Protein Homology CDS 6366 7646 . - 0 ID=cds-WP_001286281.1;Parent=gene-AC57_RS13420;Dbxref=GenBank:WP_001286281.1;Name=WP_001286281.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=AC57_RS13420;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001286281.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 7639 9441 . - . ID=gene-AC57_RS13415;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=AC57_RS13415;old_locus_tag=AC57_2155 NZ_JJLR01000079.1 Protein Homology CDS 7639 9441 . - 0 ID=cds-WP_032285706.1;Parent=gene-AC57_RS13415;Dbxref=GenBank:WP_032285706.1;Name=WP_032285706.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=AC57_RS13415;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_032285706.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 9428 11140 . - . ID=gene-AC57_RS13410;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=AC57_RS13410;old_locus_tag=AC57_2156 NZ_JJLR01000079.1 Protein Homology CDS 9428 11140 . - 0 ID=cds-WP_032237909.1;Parent=gene-AC57_RS13410;Dbxref=GenBank:WP_032237909.1;Name=WP_032237909.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=AC57_RS13410;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_032237909.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 11397 12356 . + . ID=gene-AC57_RS13405;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=AC57_RS13405;old_locus_tag=AC57_2157 NZ_JJLR01000079.1 Protein Homology CDS 11397 12356 . + 0 ID=cds-WP_032234865.1;Parent=gene-AC57_RS13405;Dbxref=GenBank:WP_032234865.1;Name=WP_032234865.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=AC57_RS13405;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_032234865.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 12547 18654 . + . ID=gene-AC57_RS13400;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=AC57_RS13400;old_locus_tag=AC57_2158 NZ_JJLR01000079.1 Protein Homology CDS 12547 18654 . + 0 ID=cds-WP_032234863.1;Parent=gene-AC57_RS13400;Dbxref=GenBank:WP_032234863.1;Name=WP_032234863.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=AC57_RS13400;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_032234863.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 18742 28233 . + . ID=gene-AC57_RS13395;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=AC57_RS13395;old_locus_tag=AC57_2159 NZ_JJLR01000079.1 Protein Homology CDS 18742 28233 . + 0 ID=cds-WP_032279847.1;Parent=gene-AC57_RS13395;Dbxref=GenBank:WP_032279847.1;Name=WP_032279847.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=AC57_RS13395;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_032279847.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 28230 29330 . + . ID=gene-AC57_RS13390;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=AC57_RS13390;old_locus_tag=AC57_2160 NZ_JJLR01000079.1 Protein Homology CDS 28230 29330 . + 0 ID=cds-WP_000982866.1;Parent=gene-AC57_RS13390;Dbxref=GenBank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=AC57_RS13390;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982866.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 29327 30130 . + . ID=gene-AC57_RS13385;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=AC57_RS13385;old_locus_tag=AC57_2161 NZ_JJLR01000079.1 Protein Homology CDS 29327 30130 . + 0 ID=cds-WP_000194286.1;Parent=gene-AC57_RS13385;Dbxref=GenBank:WP_000194286.1;Name=WP_000194286.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=AC57_RS13385;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_000194286.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 30134 31711 . + . ID=gene-AC57_RS13380;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=AC57_RS13380;old_locus_tag=AC57_2162 NZ_JJLR01000079.1 Protein Homology CDS 30134 31711 . + 0 ID=cds-WP_001088826.1;Parent=gene-AC57_RS13380;Dbxref=GenBank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=AC57_RS13380;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088826.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 31842 33863 . + . ID=gene-AC57_RS13375;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=AC57_RS13375;old_locus_tag=AC57_2163 NZ_JJLR01000079.1 Protein Homology CDS 31842 33863 . + 0 ID=cds-WP_000784555.1;Parent=gene-AC57_RS13375;Dbxref=GenBank:WP_000784555.1;Name=WP_000784555.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=AC57_RS13375;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_000784555.1;transl_table=11 NZ_JJLR01000079.1 RefSeq pseudogene 34514 34870 . + . ID=gene-AC57_RS30740;Name=AC57_RS30740;end_range=34870,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30740;partial=true;pseudo=true NZ_JJLR01000079.1 Protein Homology CDS 34514 34870 . + 0 ID=cds-AC57_RS30740;Parent=gene-AC57_RS30740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=34870,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227772.1;locus_tag=AC57_RS30740;partial=true;product=inverse autotransporter beta domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000079.1 RefSeq pseudogene 34875 35201 . + . ID=gene-AC57_RS30745;Name=AC57_RS30745;end_range=35201,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30745;old_locus_tag=AC57_2164;partial=true;pseudo=true;start_range=.,34875 NZ_JJLR01000079.1 Protein Homology CDS 34875 35201 . + 0 ID=cds-AC57_RS30745;Parent=gene-AC57_RS30745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=35201,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416485.4;locus_tag=AC57_RS30745;partial=true;product=inverse autotransporter beta domain-containing protein;pseudo=true;start_range=.,34875;transl_table=11 NZ_JJLR01000079.1 RefSeq pseudogene 35319 35996 . + . ID=gene-AC57_RS13370;Name=AC57_RS13370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS13370;old_locus_tag=AC57_2166;partial=true;pseudo=true;start_range=.,35319 NZ_JJLR01000079.1 Protein Homology CDS 35319 35996 . + 0 ID=cds-AC57_RS13370;Parent=gene-AC57_RS13370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231106.1;locus_tag=AC57_RS13370;partial=true;product=DUF3987 domain-containing protein;pseudo=true;start_range=.,35319;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 36166 37383 . - . ID=gene-AC57_RS13365;Name=AC57_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13365;old_locus_tag=AC57_2168 NZ_JJLR01000079.1 Protein Homology CDS 36166 37383 . - 0 ID=cds-WP_032280027.1;Parent=gene-AC57_RS13365;Dbxref=GenBank:WP_032280027.1;Name=WP_032280027.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279856.1;locus_tag=AC57_RS13365;product=tyrosine-type recombinase/integrase;protein_id=WP_032280027.1;transl_table=11 NZ_JJLR01000079.1 RefSeq gene 38011 38697 . - . ID=gene-AC57_RS0124320;Name=AC57_RS0124320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124320;old_locus_tag=AC57_2169 NZ_JJLR01000079.1 Protein Homology CDS 38011 38697 . - 0 ID=cds-WP_000009225.1-3;Parent=gene-AC57_RS0124320;Dbxref=GenBank:WP_000009225.1;Name=WP_000009225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232851.1;locus_tag=AC57_RS0124320;product=DUF2726 domain-containing protein;protein_id=WP_000009225.1;transl_table=11 ##sequence-region NZ_JJLR01000080.1 1 11115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000080.1 RefSeq region 1 11115 . + . ID=NZ_JJLR01000080.1:1..11115;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000080.1 RefSeq pseudogene 1 590 . - . ID=gene-AC57_RS29035;Name=AC57_RS29035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29035;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000080.1 Protein Homology CDS 1 590 . - 0 ID=cds-AC57_RS29035;Parent=gene-AC57_RS29035;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC57_RS29035;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000080.1 RefSeq gene 691 2007 . + . ID=gene-AC57_RS13355;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AC57_RS13355;old_locus_tag=AC57_2172 NZ_JJLR01000080.1 Protein Homology CDS 691 2007 . + 0 ID=cds-WP_000378575.1;Parent=gene-AC57_RS13355;Dbxref=GenBank:WP_000378575.1;Name=WP_000378575.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416488.1;locus_tag=AC57_RS13355;product=shikimate transporter;protein_id=WP_000378575.1;transl_table=11 NZ_JJLR01000080.1 RefSeq gene 2109 3563 . + . ID=gene-AC57_RS13350;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AC57_RS13350;old_locus_tag=AC57_2173 NZ_JJLR01000080.1 Protein Homology CDS 2109 3563 . + 0 ID=cds-WP_032279892.1;Parent=gene-AC57_RS13350;Dbxref=GenBank:WP_032279892.1;Name=WP_032279892.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AC57_RS13350;product=AMP nucleosidase;protein_id=WP_032279892.1;transl_table=11 NZ_JJLR01000080.1 RefSeq gene 3906 4622 . + . ID=gene-AC57_RS13345;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AC57_RS13345;old_locus_tag=AC57_2174 NZ_JJLR01000080.1 Protein Homology CDS 3906 4622 . + 0 ID=cds-WP_000532912.1;Parent=gene-AC57_RS13345;Dbxref=GenBank:WP_000532912.1;Name=WP_000532912.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=AC57_RS13345;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532912.1;transl_table=11 NZ_JJLR01000080.1 RefSeq gene 5079 5154 . - . ID=gene-AC57_RS13340;Name=AC57_RS13340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13340;old_locus_tag=AC57_2175 NZ_JJLR01000080.1 tRNAscan-SE tRNA 5079 5154 . - . ID=rna-AC57_RS13340;Parent=gene-AC57_RS13340;anticodon=(pos:complement(5119..5121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13340;product=tRNA-Asn NZ_JJLR01000080.1 tRNAscan-SE exon 5079 5154 . - . ID=exon-AC57_RS13340-1;Parent=rna-AC57_RS13340;anticodon=(pos:complement(5119..5121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13340;product=tRNA-Asn NZ_JJLR01000080.1 RefSeq pseudogene 5255 6742 . - . ID=gene-AC57_RS26185;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=pseudogene;locus_tag=AC57_RS26185;old_locus_tag=AC57_2177;pseudo=true NZ_JJLR01000080.1 Protein Homology CDS 5255 6742 . - 0 ID=cds-AC57_RS26185;Parent=gene-AC57_RS26185;Note=internal stop;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AC57_RS26185;product=toxic metabolite efflux MATE transporter YeeO;pseudo=true;transl_table=11 NZ_JJLR01000080.1 RefSeq gene 6903 6978 . + . ID=gene-AC57_RS13330;Name=AC57_RS13330;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13330;old_locus_tag=AC57_2178 NZ_JJLR01000080.1 tRNAscan-SE tRNA 6903 6978 . + . ID=rna-AC57_RS13330;Parent=gene-AC57_RS13330;anticodon=(pos:6936..6938);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13330;product=tRNA-Asn NZ_JJLR01000080.1 tRNAscan-SE exon 6903 6978 . + . ID=exon-AC57_RS13330-1;Parent=rna-AC57_RS13330;anticodon=(pos:6936..6938);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13330;product=tRNA-Asn NZ_JJLR01000080.1 RefSeq gene 7016 7966 . - . ID=gene-AC57_RS13325;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AC57_RS13325;old_locus_tag=AC57_2179 NZ_JJLR01000080.1 Protein Homology CDS 7016 7966 . - 0 ID=cds-WP_001011039.1;Parent=gene-AC57_RS13325;Dbxref=GenBank:WP_001011039.1;Name=WP_001011039.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310810.1;locus_tag=AC57_RS13325;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011039.1;transl_table=11 NZ_JJLR01000080.1 RefSeq gene 8068 8985 . - . ID=gene-AC57_RS13320;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AC57_RS13320;old_locus_tag=AC57_2180 NZ_JJLR01000080.1 Protein Homology CDS 8068 8985 . - 0 ID=cds-WP_001011447.1;Parent=gene-AC57_RS13320;Dbxref=GenBank:WP_001011447.1;Name=WP_001011447.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310811.1;locus_tag=AC57_RS13320;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_001011447.1;transl_table=11 NZ_JJLR01000080.1 RefSeq gene 9312 9387 . + . ID=gene-AC57_RS13315;Name=AC57_RS13315;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13315;old_locus_tag=AC57_2181 NZ_JJLR01000080.1 tRNAscan-SE tRNA 9312 9387 . + . ID=rna-AC57_RS13315;Parent=gene-AC57_RS13315;anticodon=(pos:9345..9347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13315;product=tRNA-Asn NZ_JJLR01000080.1 tRNAscan-SE exon 9312 9387 . + . ID=exon-AC57_RS13315-1;Parent=rna-AC57_RS13315;anticodon=(pos:9345..9347);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13315;product=tRNA-Asn NZ_JJLR01000080.1 RefSeq gene 9494 11107 . - . ID=gene-AC57_RS13310;Name=AC57_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13310;old_locus_tag=AC57_2182 NZ_JJLR01000080.1 Protein Homology CDS 9494 11107 . - 0 ID=cds-WP_000080195.1;Parent=gene-AC57_RS13310;Dbxref=GenBank:WP_000080195.1;Name=WP_000080195.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AC57_RS13310;product=IS66-like element ISEc23 family transposase;protein_id=WP_000080195.1;transl_table=11 ##sequence-region NZ_JJLR01000081.1 1 7995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000081.1 RefSeq region 1 7995 . + . ID=NZ_JJLR01000081.1:1..7995;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000081.1 RefSeq gene 1 203 . + . ID=gene-AC57_RS13305;Name=AC57_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13305;old_locus_tag=AC57_2183;partial=true;start_range=.,1 NZ_JJLR01000081.1 Protein Homology CDS 1 203 . + 2 ID=cds-WP_001666051.1-2;Parent=gene-AC57_RS13305;Dbxref=GenBank:WP_001666051.1;Name=WP_001666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC57_RS13305;partial=true;product=IS66 family transposase;protein_id=WP_001666051.1;start_range=.,1;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 259 609 . - . ID=gene-AC57_RS13300;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS13300;old_locus_tag=AC57_2184 NZ_JJLR01000081.1 Protein Homology CDS 259 609 . - 0 ID=cds-WP_000624722.1-2;Parent=gene-AC57_RS13300;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC57_RS13300;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 606 1031 . - . ID=gene-AC57_RS13295;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS13295;old_locus_tag=AC57_2185 NZ_JJLR01000081.1 Protein Homology CDS 606 1031 . - 0 ID=cds-WP_000422741.1-2;Parent=gene-AC57_RS13295;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC57_RS13295;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 1113 2039 . - . ID=gene-AC57_RS13290;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AC57_RS13290;old_locus_tag=AC57_2186 NZ_JJLR01000081.1 Protein Homology CDS 1113 2039 . - 0 ID=cds-WP_148725152.1;Parent=gene-AC57_RS13290;Dbxref=GenBank:WP_148725152.1;Name=WP_148725152.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707892.1;locus_tag=AC57_RS13290;product=L%2CD-transpeptidase;protein_id=WP_148725152.1;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 2101 3180 . - . ID=gene-AC57_RS13285;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AC57_RS13285;old_locus_tag=AC57_2187 NZ_JJLR01000081.1 Protein Homology CDS 2101 3180 . - 0 ID=cds-WP_032237973.1;Parent=gene-AC57_RS13285;Dbxref=GenBank:WP_032237973.1;Name=WP_032237973.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310813.1;locus_tag=AC57_RS13285;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_032237973.1;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 3192 3935 . - . ID=gene-AC57_RS13280;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AC57_RS13280;old_locus_tag=AC57_2188 NZ_JJLR01000081.1 Protein Homology CDS 3192 3935 . - 0 ID=cds-WP_001297350.1;Parent=gene-AC57_RS13280;Dbxref=GenBank:WP_001297350.1;Name=WP_001297350.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310814.1;locus_tag=AC57_RS13280;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001297350.1;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 3932 4477 . - . ID=gene-AC57_RS13275;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AC57_RS13275;old_locus_tag=AC57_2189 NZ_JJLR01000081.1 Protein Homology CDS 3932 4477 . - 0 ID=cds-WP_000973176.1;Parent=gene-AC57_RS13275;Dbxref=GenBank:WP_000973176.1;Name=WP_000973176.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AC57_RS13275;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973176.1;transl_table=11 NZ_JJLR01000081.1 RefSeq pseudogene 4629 4772 . - . ID=gene-AC57_RS30750;Name=AC57_RS30750;end_range=4772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30750;old_locus_tag=AC57_2190;partial=true;pseudo=true NZ_JJLR01000081.1 Protein Homology CDS 4629 4772 . - 0 ID=cds-AC57_RS30750;Parent=gene-AC57_RS30750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=AC57_RS30750;partial=true;product=cobalamin biosynthesis protein;pseudo=true;transl_table=11 NZ_JJLR01000081.1 RefSeq pseudogene 4781 4969 . - . ID=gene-AC57_RS30755;Name=AC57_RS30755;end_range=4969,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30755;partial=true;pseudo=true;start_range=.,4781 NZ_JJLR01000081.1 Protein Homology CDS 4781 4969 . - 0 ID=cds-AC57_RS30755;Parent=gene-AC57_RS30755;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4969,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AC57_RS30755;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,4781;transl_table=11 NZ_JJLR01000081.1 RefSeq pseudogene 5994 6332 . + . ID=gene-AC57_RS29055;Name=AC57_RS29055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29055;partial=true;pseudo=true;start_range=.,5994 NZ_JJLR01000081.1 Protein Homology CDS 5994 6332 . + 0 ID=cds-AC57_RS29055;Parent=gene-AC57_RS29055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AC57_RS29055;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,5994;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 6528 7760 . + . ID=gene-AC57_RS13255;Name=AC57_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13255;old_locus_tag=AC57_2193 NZ_JJLR01000081.1 Protein Homology CDS 6528 7760 . + 0 ID=cds-WP_032285707.1;Parent=gene-AC57_RS13255;Dbxref=GenBank:WP_032285707.1;Name=WP_032285707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403105.1;locus_tag=AC57_RS13255;product=PfkB family carbohydrate kinase;protein_id=WP_032285707.1;transl_table=11 NZ_JJLR01000081.1 RefSeq gene 7789 7995 . + . ID=gene-AC57_RS27255;Name=AC57_RS27255;end_range=7995,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27255;old_locus_tag=AC57_2194;partial=true NZ_JJLR01000081.1 Protein Homology CDS 7789 7995 . + 0 ID=cds-WP_000179203.1-2;Parent=gene-AC57_RS27255;Dbxref=GenBank:WP_000179203.1;Name=WP_000179203.1;Ontology_term=GO:0006313;end_range=7995,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27255;partial=true;product=IS1 family transposase;protein_id=WP_000179203.1;transl_table=11 ##sequence-region NZ_JJLR01000082.1 1 2982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000082.1 RefSeq region 1 2982 . + . ID=NZ_JJLR01000082.1:1..2982;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000082.1 RefSeq gene 9 1622 . + . ID=gene-AC57_RS13250;Name=AC57_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13250;old_locus_tag=AC57_2195 NZ_JJLR01000082.1 Protein Homology CDS 9 1622 . + 0 ID=cds-WP_032285709.1;Parent=gene-AC57_RS13250;Dbxref=GenBank:WP_032285709.1;Name=WP_032285709.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AC57_RS13250;product=IS66-like element ISEc23 family transposase;protein_id=WP_032285709.1;transl_table=11 NZ_JJLR01000082.1 RefSeq gene 1913 2260 . + . ID=gene-AC57_RS13245;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS13245;old_locus_tag=AC57_2197 NZ_JJLR01000082.1 Protein Homology CDS 1913 2260 . + 0 ID=cds-WP_000612591.1;Parent=gene-AC57_RS13245;Dbxref=GenBank:WP_000612591.1;Name=WP_000612591.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC57_RS13245;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612591.1;transl_table=11 NZ_JJLR01000082.1 RefSeq pseudogene 2310 2982 . + . ID=gene-AC57_RS13240;Name=AC57_RS13240;end_range=2982,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS13240;old_locus_tag=AC57_2198;partial=true;pseudo=true NZ_JJLR01000082.1 Protein Homology CDS 2310 2982 . + 0 ID=cds-AC57_RS13240;Parent=gene-AC57_RS13240;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2982,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC57_RS13240;partial=true;product=IS66-like element ISEc8 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000083.1 1 8366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000083.1 RefSeq region 1 8366 . + . ID=NZ_JJLR01000083.1:1..8366;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000083.1 RefSeq pseudogene 147 886 . - . ID=gene-AC57_RS29850;Name=AC57_RS29850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29850;partial=true;pseudo=true;start_range=.,147 NZ_JJLR01000083.1 Protein Homology CDS 147 886 . - 0 ID=cds-AC57_RS29850;Parent=gene-AC57_RS29850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS29850;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,147;transl_table=11 NZ_JJLR01000083.1 cmsearch sequence_feature 489 605 . - . ID=id-AC57_RS29850;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS29850;pseudo=true NZ_JJLR01000083.1 RefSeq pseudogene 930 2126 . - . ID=gene-AC57_RS27265;Name=AC57_RS27265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27265;partial=true;pseudo=true;start_range=.,930 NZ_JJLR01000083.1 Protein Homology CDS 930 2126 . - 0 ID=cds-AC57_RS27265;Parent=gene-AC57_RS27265;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AC57_RS27265;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,930;transl_table=11 NZ_JJLR01000083.1 RefSeq pseudogene 2212 2601 . + . ID=gene-AC57_RS13225;Name=AC57_RS13225;end_range=2601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS13225;old_locus_tag=AC57_2203;partial=true;pseudo=true;start_range=.,2212 NZ_JJLR01000083.1 Protein Homology CDS 2212 2601 . + 0 ID=cds-AC57_RS13225;Parent=gene-AC57_RS13225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2601,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC57_RS13225;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,2212;transl_table=11 NZ_JJLR01000083.1 RefSeq gene 2758 4506 . + . ID=gene-AC57_RS13220;Name=AC57_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13220;old_locus_tag=AC57_2204 NZ_JJLR01000083.1 Protein Homology CDS 2758 4506 . + 0 ID=cds-WP_032237877.1;Parent=gene-AC57_RS13220;Dbxref=GenBank:WP_032237877.1;Name=WP_032237877.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562494.1;locus_tag=AC57_RS13220;product=3'-5' exonuclease;protein_id=WP_032237877.1;transl_table=11 NZ_JJLR01000083.1 RefSeq gene 4832 5359 . - . ID=gene-AC57_RS13215;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AC57_RS13215;old_locus_tag=AC57_2205 NZ_JJLR01000083.1 Protein Homology CDS 4832 5359 . - 0 ID=cds-WP_032237878.1;Parent=gene-AC57_RS13215;Dbxref=GenBank:WP_032237878.1;Name=WP_032237878.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455977.1;locus_tag=AC57_RS13215;product=superoxide dismutase family protein;protein_id=WP_032237878.1;transl_table=11 NZ_JJLR01000083.1 RefSeq pseudogene 5547 5651 . + . ID=gene-AC57_RS30760;Name=AC57_RS30760;end_range=5651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30760;partial=true;pseudo=true NZ_JJLR01000083.1 Protein Homology CDS 5547 5651 . + 0 ID=cds-AC57_RS30760;Parent=gene-AC57_RS30760;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=AC57_RS30760;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000083.1 RefSeq gene 5720 7291 . - . ID=gene-AC57_RS13210;Name=AC57_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13210;old_locus_tag=AC57_2206 NZ_JJLR01000083.1 Protein Homology CDS 5720 7291 . - 0 ID=cds-WP_032280090.1;Parent=gene-AC57_RS13210;Dbxref=GenBank:WP_032280090.1;Name=WP_032280090.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC57_RS13210;product=IS66-like element ISCro1 family transposase;protein_id=WP_032280090.1;transl_table=11 NZ_JJLR01000083.1 RefSeq gene 7311 7658 . - . ID=gene-AC57_RS13205;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS13205;old_locus_tag=AC57_2207 NZ_JJLR01000083.1 Protein Homology CDS 7311 7658 . - 0 ID=cds-WP_000624622.1;Parent=gene-AC57_RS13205;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC57_RS13205;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLR01000083.1 RefSeq gene 7658 8305 . - . ID=gene-AC57_RS13200;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS13200;old_locus_tag=AC57_2208 NZ_JJLR01000083.1 Protein Homology CDS 7658 8305 . - 0 ID=cds-WP_032280122.1;Parent=gene-AC57_RS13200;Dbxref=GenBank:WP_032280122.1;Name=WP_032280122.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355812.1;locus_tag=AC57_RS13200;product=IS66-like element accessory protein TnpA;protein_id=WP_032280122.1;transl_table=11 ##sequence-region NZ_JJLR01000084.1 1 31731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000084.1 RefSeq region 1 31731 . + . ID=NZ_JJLR01000084.1:1..31731;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000084.1 RefSeq gene 1 258 . + . ID=gene-AC57_RS13195;Name=AC57_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13195;old_locus_tag=AC57_2209;partial=true;start_range=.,1 NZ_JJLR01000084.1 Protein Homology CDS 1 258 . + 0 ID=cds-WP_000642053.1-2;Parent=gene-AC57_RS13195;Dbxref=GenBank:WP_000642053.1;Name=WP_000642053.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS13195;partial=true;product=IS1 family transposase;protein_id=WP_000642053.1;start_range=.,1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 443 1126 . + . ID=gene-AC57_RS13190;Name=AC57_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13190;old_locus_tag=AC57_2210 NZ_JJLR01000084.1 Protein Homology CDS 443 1126 . + 0 ID=cds-WP_032187468.1;Parent=gene-AC57_RS13190;Dbxref=GenBank:WP_032187468.1;Name=WP_032187468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310826.1;locus_tag=AC57_RS13190;product=hypothetical protein;protein_id=WP_032187468.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 1142 1552 . + . ID=gene-AC57_RS13185;Name=AC57_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13185;old_locus_tag=AC57_2211 NZ_JJLR01000084.1 Protein Homology CDS 1142 1552 . + 0 ID=cds-WP_000846713.1;Parent=gene-AC57_RS13185;Dbxref=GenBank:WP_000846713.1;Name=WP_000846713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310827.1;locus_tag=AC57_RS13185;product=hypothetical protein;protein_id=WP_000846713.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 1773 2594 . + . ID=gene-AC57_RS13180;Name=AC57_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13180;old_locus_tag=AC57_2213 NZ_JJLR01000084.1 Protein Homology CDS 1773 2594 . + 0 ID=cds-WP_021541044.1;Parent=gene-AC57_RS13180;Dbxref=GenBank:WP_021541044.1;Name=WP_021541044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310828.1;locus_tag=AC57_RS13180;product=DUF932 domain-containing protein;protein_id=WP_021541044.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 2676 3155 . + . ID=gene-AC57_RS13175;Name=AC57_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13175;old_locus_tag=AC57_2214 NZ_JJLR01000084.1 Protein Homology CDS 2676 3155 . + 0 ID=cds-WP_032237291.1;Parent=gene-AC57_RS13175;Dbxref=GenBank:WP_032237291.1;Name=WP_032237291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310829.1;locus_tag=AC57_RS13175;product=antirestriction protein;protein_id=WP_032237291.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 3171 3647 . + . ID=gene-AC57_RS13170;Name=yeeS;gbkey=Gene;gene=yeeS;gene_biotype=protein_coding;locus_tag=AC57_RS13170;old_locus_tag=AC57_2215 NZ_JJLR01000084.1 Protein Homology CDS 3171 3647 . + 0 ID=cds-WP_032237290.1;Parent=gene-AC57_RS13170;Dbxref=GenBank:WP_032237290.1;Name=WP_032237290.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;gene=yeeS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310830.1;locus_tag=AC57_RS13170;product=JAB domain-containing protein;protein_id=WP_032237290.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 3710 3931 . + . ID=gene-AC57_RS13165;Name=yeeT;gbkey=Gene;gene=yeeT;gene_biotype=protein_coding;locus_tag=AC57_RS13165;old_locus_tag=AC57_2216 NZ_JJLR01000084.1 Protein Homology CDS 3710 3931 . + 0 ID=cds-WP_000692323.1;Parent=gene-AC57_RS13165;Dbxref=GenBank:WP_000692323.1;Name=WP_000692323.1;gbkey=CDS;gene=yeeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310831.1;locus_tag=AC57_RS13165;product=DUF987 domain-containing protein;protein_id=WP_000692323.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 4005 4373 . + . ID=gene-AC57_RS0124345;Name=cbeA;gbkey=Gene;gene=cbeA;gene_biotype=protein_coding;locus_tag=AC57_RS0124345;old_locus_tag=AC57_2217 NZ_JJLR01000084.1 Protein Homology CDS 4005 4373 . + 0 ID=cds-WP_032279908.1;Parent=gene-AC57_RS0124345;Dbxref=GenBank:WP_032279908.1;Name=WP_032279908.1;gbkey=CDS;gene=cbeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310832.1;locus_tag=AC57_RS0124345;product=type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA;protein_id=WP_032279908.1;transl_table=11 NZ_JJLR01000084.1 RefSeq pseudogene 4462 4835 . + . ID=gene-AC57_RS13160;Name=cbtA;gbkey=Gene;gene=cbtA;gene_biotype=pseudogene;locus_tag=AC57_RS13160;old_locus_tag=AC57_2218;pseudo=true NZ_JJLR01000084.1 Protein Homology CDS 4462 4835 . + 0 ID=cds-AC57_RS13160;Parent=gene-AC57_RS13160;Note=frameshifted;gbkey=CDS;gene=cbtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416509.1;locus_tag=AC57_RS13160;product=type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA;pseudo=true;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 4832 5026 . + . ID=gene-AC57_RS13155;Name=yeeW;gbkey=Gene;gene=yeeW;gene_biotype=protein_coding;locus_tag=AC57_RS13155;old_locus_tag=AC57_2219 NZ_JJLR01000084.1 Protein Homology CDS 4832 5026 . + 0 ID=cds-WP_021541045.1;Parent=gene-AC57_RS13155;Dbxref=GenBank:WP_021541045.1;Name=WP_021541045.1;gbkey=CDS;gene=yeeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310834.2;locus_tag=AC57_RS13155;product=DUF5983 family protein;protein_id=WP_021541045.1;transl_table=11 NZ_JJLR01000084.1 RefSeq pseudogene 5060 5152 . + . ID=gene-AC57_RS29865;Name=AC57_RS29865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29865;old_locus_tag=AC57_2220;partial=true;pseudo=true;start_range=.,5060 NZ_JJLR01000084.1 Protein Homology CDS 5060 5152 . + 0 ID=cds-AC57_RS29865;Parent=gene-AC57_RS29865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AC57_RS29865;partial=true;product=DUF957 domain-containing protein;pseudo=true;start_range=.,5060;transl_table=11 NZ_JJLR01000084.1 RefSeq pseudogene 5441 5578 . - . ID=gene-AC57_RS27280;Name=AC57_RS27280;end_range=5578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27280;partial=true;pseudo=true NZ_JJLR01000084.1 Protein Homology CDS 5441 5578 . - 0 ID=cds-AC57_RS27280;Parent=gene-AC57_RS27280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC57_RS27280;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 5641 5823 . + . ID=gene-AC57_RS0124350;Name=AC57_RS0124350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124350 NZ_JJLR01000084.1 Protein Homology CDS 5641 5823 . + 0 ID=cds-WP_001016348.1;Parent=gene-AC57_RS0124350;Dbxref=GenBank:WP_001016348.1;Name=WP_001016348.1;Ontology_term=GO:0006576,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296208.1;locus_tag=AC57_RS0124350;product=EutP/PduV family microcompartment system protein;protein_id=WP_001016348.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 5924 6253 . - . ID=gene-AC57_RS13145;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AC57_RS13145;old_locus_tag=AC57_2221 NZ_JJLR01000084.1 Protein Homology CDS 5924 6253 . - 0 ID=cds-WP_000450409.1;Parent=gene-AC57_RS13145;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AC57_RS13145;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 6425 7483 . - . ID=gene-AC57_RS13140;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AC57_RS13140;old_locus_tag=AC57_2223 NZ_JJLR01000084.1 Protein Homology CDS 6425 7483 . - 0 ID=cds-WP_001200905.1;Parent=gene-AC57_RS13140;Dbxref=GenBank:WP_001200905.1;Name=WP_001200905.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AC57_RS13140;product=FUSC family protein;protein_id=WP_001200905.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 7681 8154 . - . ID=gene-AC57_RS13135;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AC57_RS13135;old_locus_tag=AC57_2224 NZ_JJLR01000084.1 Protein Homology CDS 7681 8154 . - 0 ID=cds-WP_001105393.1;Parent=gene-AC57_RS13135;Dbxref=GenBank:WP_001105393.1;Name=WP_001105393.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AC57_RS13135;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105393.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 8273 9439 . - . ID=gene-AC57_RS13130;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AC57_RS13130;old_locus_tag=AC57_2225 NZ_JJLR01000084.1 Protein Homology CDS 8273 9439 . - 0 ID=cds-WP_001320295.1;Parent=gene-AC57_RS13130;Dbxref=GenBank:WP_001320295.1;Name=WP_001320295.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AC57_RS13130;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_001320295.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 9648 11075 . + . ID=gene-AC57_RS13125;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AC57_RS13125;old_locus_tag=AC57_2227 NZ_JJLR01000084.1 Protein Homology CDS 9648 11075 . + 0 ID=cds-WP_074495016.1;Parent=gene-AC57_RS13125;Dbxref=GenBank:WP_074495016.1;Name=WP_074495016.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310840.1;locus_tag=AC57_RS13125;product=exodeoxyribonuclease I;protein_id=WP_074495016.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 11118 11345 . - . ID=gene-AC57_RS13120;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AC57_RS13120;old_locus_tag=AC57_2228 NZ_JJLR01000084.1 Protein Homology CDS 11118 11345 . - 0 ID=cds-WP_032237289.1;Parent=gene-AC57_RS13120;Dbxref=GenBank:WP_032237289.1;Name=WP_032237289.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310841.1;locus_tag=AC57_RS13120;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_032237289.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 11359 12417 . - . ID=gene-AC57_RS13115;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AC57_RS13115;old_locus_tag=AC57_2229 NZ_JJLR01000084.1 Protein Homology CDS 11359 12417 . - 0 ID=cds-WP_032237288.1;Parent=gene-AC57_RS13115;Dbxref=GenBank:WP_032237288.1;Name=WP_032237288.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416517.1;locus_tag=AC57_RS13115;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_032237288.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 12596 13954 . - . ID=gene-AC57_RS13110;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AC57_RS13110;old_locus_tag=AC57_2231 NZ_JJLR01000084.1 Protein Homology CDS 12596 13954 . - 0 ID=cds-WP_000019197.1;Parent=gene-AC57_RS13110;Dbxref=GenBank:WP_000019197.1;Name=WP_000019197.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=AC57_RS13110;product=putrescine/proton symporter PlaP;protein_id=WP_000019197.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 13944 14006 . - . ID=gene-AC57_RS29870;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=AC57_RS29870 NZ_JJLR01000084.1 Protein Homology CDS 13944 14006 . - 0 ID=cds-WP_113706575.1;Parent=gene-AC57_RS29870;Dbxref=GenBank:WP_113706575.1;Name=WP_113706575.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=AC57_RS29870;product=membrane protein YoeI;protein_id=WP_113706575.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 14221 15150 . - . ID=gene-AC57_RS13105;Name=yeeY;gbkey=Gene;gene=yeeY;gene_biotype=protein_coding;locus_tag=AC57_RS13105;old_locus_tag=AC57_2232 NZ_JJLR01000084.1 Protein Homology CDS 14221 15150 . - 0 ID=cds-WP_023565113.1;Parent=gene-AC57_RS13105;Dbxref=GenBank:WP_023565113.1;Name=WP_023565113.1;gbkey=CDS;gene=yeeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416519.4;locus_tag=AC57_RS13105;product=LysR substrate-binding domain-containing protein;protein_id=WP_023565113.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 15196 16020 . - . ID=gene-AC57_RS13100;Name=yeeZ;gbkey=Gene;gene=yeeZ;gene_biotype=protein_coding;locus_tag=AC57_RS13100;old_locus_tag=AC57_2233 NZ_JJLR01000084.1 Protein Homology CDS 15196 16020 . - 0 ID=cds-WP_023565114.1;Parent=gene-AC57_RS13100;Dbxref=GenBank:WP_023565114.1;Name=WP_023565114.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;gene=yeeZ;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310845.1;locus_tag=AC57_RS13100;product=SDR family oxidoreductase;protein_id=WP_023565114.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 16103 16357 . - . ID=gene-AC57_RS13095;Name=yoeB;gbkey=Gene;gene=yoeB;gene_biotype=protein_coding;locus_tag=AC57_RS13095;old_locus_tag=AC57_2234 NZ_JJLR01000084.1 Protein Homology CDS 16103 16357 . - 0 ID=cds-WP_001560606.1;Parent=gene-AC57_RS13095;Dbxref=GenBank:WP_001560606.1;Name=WP_001560606.1;gbkey=CDS;gene=yoeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707909.1;locus_tag=AC57_RS13095;product=type II toxin-antitoxin system mRNA interferase toxin YoeB;protein_id=WP_001560606.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 16354 16605 . - . ID=gene-AC57_RS13090;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=AC57_RS13090;old_locus_tag=AC57_2235 NZ_JJLR01000084.1 Protein Homology CDS 16354 16605 . - 0 ID=cds-WP_001259255.1;Parent=gene-AC57_RS13090;Dbxref=GenBank:WP_001259255.1;Name=WP_001259255.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416521.2;locus_tag=AC57_RS13090;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_001259255.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 16888 16938 . + . ID=gene-AC57_RS27285;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AC57_RS27285 NZ_JJLR01000084.1 Protein Homology CDS 16888 16938 . + 0 ID=cds-WP_001364200.1;Parent=gene-AC57_RS27285;Dbxref=GenBank:WP_001364200.1;Name=WP_001364200.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AC57_RS27285;product=his operon leader peptide;protein_id=WP_001364200.1;transl_table=11 NZ_JJLR01000084.1 cmsearch sequence_feature 16914 17037 . + . ID=id-NZ_JJLR01000084.1:16914..17037;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLR01000084.1 RefSeq gene 17085 17984 . + . ID=gene-AC57_RS13085;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AC57_RS13085;old_locus_tag=AC57_2236 NZ_JJLR01000084.1 Protein Homology CDS 17085 17984 . + 0 ID=cds-WP_032237287.1;Parent=gene-AC57_RS13085;Dbxref=GenBank:WP_032237287.1;Name=WP_032237287.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AC57_RS13085;product=ATP phosphoribosyltransferase;protein_id=WP_032237287.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 17990 19294 . + . ID=gene-AC57_RS13080;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AC57_RS13080;old_locus_tag=AC57_2237 NZ_JJLR01000084.1 Protein Homology CDS 17990 19294 . + 0 ID=cds-WP_032237286.1;Parent=gene-AC57_RS13080;Dbxref=GenBank:WP_032237286.1;Name=WP_032237286.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416524.1;locus_tag=AC57_RS13080;product=histidinol dehydrogenase;protein_id=WP_032237286.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 19291 20361 . + . ID=gene-AC57_RS13075;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AC57_RS13075;old_locus_tag=AC57_2238 NZ_JJLR01000084.1 Protein Homology CDS 19291 20361 . + 0 ID=cds-WP_024249713.1;Parent=gene-AC57_RS13075;Dbxref=GenBank:WP_024249713.1;Name=WP_024249713.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416525.1;locus_tag=AC57_RS13075;product=histidinol-phosphate transaminase;protein_id=WP_024249713.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 20361 21428 . + . ID=gene-AC57_RS13070;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AC57_RS13070;old_locus_tag=AC57_2239 NZ_JJLR01000084.1 Protein Homology CDS 20361 21428 . + 0 ID=cds-WP_032267794.1;Parent=gene-AC57_RS13070;Dbxref=GenBank:WP_032267794.1;Name=WP_032267794.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=AC57_RS13070;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_032267794.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 21428 22018 . + . ID=gene-AC57_RS13065;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AC57_RS13065;old_locus_tag=AC57_2240 NZ_JJLR01000084.1 Protein Homology CDS 21428 22018 . + 0 ID=cds-WP_024249715.1;Parent=gene-AC57_RS13065;Dbxref=GenBank:WP_024249715.1;Name=WP_024249715.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AC57_RS13065;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_024249715.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 22018 22755 . + . ID=gene-AC57_RS13060;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AC57_RS13060;old_locus_tag=AC57_2241 NZ_JJLR01000084.1 Protein Homology CDS 22018 22755 . + 0 ID=cds-WP_024249716.1;Parent=gene-AC57_RS13060;Dbxref=GenBank:WP_024249716.1;Name=WP_024249716.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416528.2;locus_tag=AC57_RS13060;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_024249716.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 22737 23513 . + . ID=gene-AC57_RS13055;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AC57_RS13055;old_locus_tag=AC57_2242 NZ_JJLR01000084.1 Protein Homology CDS 22737 23513 . + 0 ID=cds-WP_032279904.1;Parent=gene-AC57_RS13055;Dbxref=GenBank:WP_032279904.1;Name=WP_032279904.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AC57_RS13055;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_032279904.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 23507 24106 . + . ID=gene-AC57_RS13050;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AC57_RS13050;old_locus_tag=AC57_2243 NZ_JJLR01000084.1 Protein Homology CDS 23507 24106 . + 0 ID=cds-WP_024249718.1;Parent=gene-AC57_RS13050;Dbxref=GenBank:WP_024249718.1;Name=WP_024249718.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416530.1;locus_tag=AC57_RS13050;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_024249718.1;transl_table=11 NZ_JJLR01000084.1 RefSeq pseudogene 24147 25314 . - . ID=gene-AC57_RS30765;Name=AC57_RS30765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30765;partial=true;pseudo=true;start_range=.,24147 NZ_JJLR01000084.1 Protein Homology CDS 24147 25314 . - 0 ID=cds-AC57_RS30765;Parent=gene-AC57_RS30765;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611291.1;locus_tag=AC57_RS30765;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,24147;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 25476 26642 . - . ID=gene-AC57_RS13045;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AC57_RS13045;old_locus_tag=AC57_2246 NZ_JJLR01000084.1 Protein Homology CDS 25476 26642 . - 0 ID=cds-WP_024249720.1;Parent=gene-AC57_RS13045;Dbxref=GenBank:WP_024249720.1;Name=WP_024249720.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=AC57_RS13045;product=UDP-glucose 6-dehydrogenase;protein_id=WP_024249720.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 26946 28352 . - . ID=gene-AC57_RS13040;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AC57_RS13040;old_locus_tag=AC57_2247 NZ_JJLR01000084.1 Protein Homology CDS 26946 28352 . - 0 ID=cds-WP_032237283.1;Parent=gene-AC57_RS13040;Dbxref=GenBank:WP_032237283.1;Name=WP_032237283.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416533.1;locus_tag=AC57_RS13040;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032237283.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 28464 29189 . - . ID=gene-AC57_RS13035;Name=AC57_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13035;old_locus_tag=AC57_2248 NZ_JJLR01000084.1 Protein Homology CDS 28464 29189 . - 0 ID=cds-WP_071999876.1;Parent=gene-AC57_RS13035;Dbxref=GenBank:WP_071999876.1;Name=WP_071999876.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.6;locus_tag=AC57_RS13035;product=acyltransferase;protein_id=WP_071999876.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 29123 29488 . - . ID=gene-AC57_RS31240;Name=AC57_RS31240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31240 NZ_JJLR01000084.1 Protein Homology CDS 29123 29488 . - 0 ID=cds-WP_071999877.1;Parent=gene-AC57_RS31240;Dbxref=GenBank:WP_071999877.1;Name=WP_071999877.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF019403.6;locus_tag=AC57_RS31240;product=acyltransferase family protein;protein_id=WP_071999877.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 29656 30243 . - . ID=gene-AC57_RS13030;Name=AC57_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13030;old_locus_tag=AC57_2249 NZ_JJLR01000084.1 GeneMarkS-2+ CDS 29656 30243 . - 0 ID=cds-WP_032237281.1;Parent=gene-AC57_RS13030;Dbxref=GenBank:WP_032237281.1;Name=WP_032237281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS13030;product=hypothetical protein;protein_id=WP_032237281.1;transl_table=11 NZ_JJLR01000084.1 RefSeq gene 30289 31332 . - . ID=gene-AC57_RS13025;Name=AC57_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13025;old_locus_tag=AC57_2250 NZ_JJLR01000084.1 GeneMarkS-2+ CDS 30289 31332 . - 0 ID=cds-WP_032279901.1;Parent=gene-AC57_RS13025;Dbxref=GenBank:WP_032279901.1;Name=WP_032279901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS13025;product=hypothetical protein;protein_id=WP_032279901.1;transl_table=11 NZ_JJLR01000084.1 RefSeq pseudogene 31399 31731 . - . ID=gene-AC57_RS13020;Name=AC57_RS13020;end_range=31731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS13020;old_locus_tag=AC57_2251;partial=true;pseudo=true NZ_JJLR01000084.1 Protein Homology CDS 31399 31731 . - 0 ID=cds-AC57_RS13020;Parent=gene-AC57_RS13020;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=31731,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS13020;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000085.1 1 18029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000085.1 RefSeq region 1 18029 . + . ID=NZ_JJLR01000085.1:1..18029;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000085.1 RefSeq gene 19 94 . + . ID=gene-AC57_RS13015;Name=AC57_RS13015;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS13015;old_locus_tag=AC57_2252 NZ_JJLR01000085.1 tRNAscan-SE tRNA 19 94 . + . ID=rna-AC57_RS13015;Parent=gene-AC57_RS13015;anticodon=(pos:52..54);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13015;product=tRNA-Phe NZ_JJLR01000085.1 tRNAscan-SE exon 19 94 . + . ID=exon-AC57_RS13015-1;Parent=rna-AC57_RS13015;anticodon=(pos:52..54);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS13015;product=tRNA-Phe NZ_JJLR01000085.1 RefSeq gene 292 1554 . + . ID=gene-AC57_RS13010;Name=AC57_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13010;old_locus_tag=AC57_2253 NZ_JJLR01000085.1 Protein Homology CDS 292 1554 . + 0 ID=cds-WP_001218861.1;Parent=gene-AC57_RS13010;Dbxref=GenBank:WP_001218861.1;Name=WP_001218861.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=AC57_RS13010;product=tyrosine-type recombinase/integrase;protein_id=WP_001218861.1;transl_table=11 NZ_JJLR01000085.1 RefSeq pseudogene 1651 1725 . - . ID=gene-AC57_RS31245;Name=AC57_RS31245;end_range=1725,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31245;partial=true;pseudo=true NZ_JJLR01000085.1 Protein Homology CDS 1651 1725 . - 0 ID=cds-AC57_RS31245;Parent=gene-AC57_RS31245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1725,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398269.1;locus_tag=AC57_RS31245;partial=true;product=phosphoethanolamine transferase;pseudo=true;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 1740 2438 . - . ID=gene-AC57_RS0124370;Name=AC57_RS0124370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124370;old_locus_tag=AC57_2254 NZ_JJLR01000085.1 Protein Homology CDS 1740 2438 . - 0 ID=cds-WP_077712526.1;Parent=gene-AC57_RS0124370;Dbxref=GenBank:WP_077712526.1;Name=WP_077712526.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124370;product=IS1 family transposase;protein_id=WP_077712526.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 2581 4080 . - . ID=gene-AC57_RS13005;Name=AC57_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13005;old_locus_tag=AC57_2255 NZ_JJLR01000085.1 Protein Homology CDS 2581 4080 . - 0 ID=cds-WP_001598616.1;Parent=gene-AC57_RS13005;Dbxref=GenBank:WP_001598616.1;Name=WP_001598616.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245085.1;locus_tag=AC57_RS13005;product=basic amino acid/polyamine antiporter;protein_id=WP_001598616.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 4155 6524 . - . ID=gene-AC57_RS13000;Name=AC57_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS13000;old_locus_tag=AC57_2256 NZ_JJLR01000085.1 Protein Homology CDS 4155 6524 . - 0 ID=cds-WP_001598617.1;Parent=gene-AC57_RS13000;Dbxref=GenBank:WP_001598617.1;Name=WP_001598617.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671167.1;locus_tag=AC57_RS13000;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;protein_id=WP_001598617.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 6629 8098 . - . ID=gene-AC57_RS12995;Name=AC57_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12995;old_locus_tag=AC57_2257 NZ_JJLR01000085.1 Protein Homology CDS 6629 8098 . - 0 ID=cds-WP_001329893.1;Parent=gene-AC57_RS12995;Dbxref=GenBank:WP_001329893.1;Name=WP_001329893.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616049.1;locus_tag=AC57_RS12995;product=basic amino acid/polyamine antiporter;protein_id=WP_001329893.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 8351 9045 . + . ID=gene-AC57_RS29075;Name=AC57_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29075 NZ_JJLR01000085.1 Protein Homology CDS 8351 8597 . + 0 ID=cds-WP_096989293.1;Parent=gene-AC57_RS29075;Dbxref=GenBank:WP_096989293.1;Name=WP_096989293.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AC57_RS29075;product=IS1 family transposase;protein_id=WP_096989293.1;transl_table=11 NZ_JJLR01000085.1 Protein Homology CDS 8597 9045 . + 2 ID=cds-WP_096989293.1;Parent=gene-AC57_RS29075;Dbxref=GenBank:WP_096989293.1;Name=WP_096989293.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=AC57_RS29075;product=IS1 family transposase;protein_id=WP_096989293.1;transl_table=11 NZ_JJLR01000085.1 RefSeq pseudogene 9678 10067 . + . ID=gene-AC57_RS12985;Name=AC57_RS12985;end_range=10067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS12985;old_locus_tag=AC57_2260;partial=true;pseudo=true NZ_JJLR01000085.1 Protein Homology CDS 9678 10067 . + 0 ID=cds-AC57_RS12985;Parent=gene-AC57_RS12985;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312152.1;locus_tag=AC57_RS12985;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 10140 10922 . - . ID=gene-AC57_RS12980;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AC57_RS12980;old_locus_tag=AC57_2261 NZ_JJLR01000085.1 Protein Homology CDS 10140 10922 . - 0 ID=cds-WP_001317493.1;Parent=gene-AC57_RS12980;Dbxref=GenBank:WP_001317493.1;Name=WP_001317493.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858162.1;locus_tag=AC57_RS12980;product=IS21-like element IS100kyp family helper ATPase IstB;protein_id=WP_001317493.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 10919 11941 . - . ID=gene-AC57_RS12975;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AC57_RS12975;old_locus_tag=AC57_2262 NZ_JJLR01000085.1 Protein Homology CDS 10919 11941 . - 0 ID=cds-WP_032279994.1;Parent=gene-AC57_RS12975;Dbxref=GenBank:WP_032279994.1;Name=WP_032279994.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=AC57_RS12975;product=IS21-like element IS100 family transposase;protein_id=WP_032279994.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 12000 12593 . + . ID=gene-AC57_RS12970;Name=AC57_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12970;old_locus_tag=AC57_2263 NZ_JJLR01000085.1 Protein Homology CDS 12000 12593 . + 0 ID=cds-WP_223409530.1;Parent=gene-AC57_RS12970;Dbxref=GenBank:WP_223409530.1;Name=WP_223409530.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.6;locus_tag=AC57_RS12970;product=zinc-binding dehydrogenase;protein_id=WP_223409530.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 12651 13307 . - . ID=gene-AC57_RS12965;Name=AC57_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12965;old_locus_tag=AC57_2264 NZ_JJLR01000085.1 Protein Homology CDS 12651 13307 . - 0 ID=cds-WP_001724255.1;Parent=gene-AC57_RS12965;Dbxref=GenBank:WP_001724255.1;Name=WP_001724255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000145474.1;locus_tag=AC57_RS12965;product=acrylate utilization transcriptional regulator AcuR;protein_id=WP_001724255.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 13555 14832 . - . ID=gene-AC57_RS12960;Name=AC57_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12960;old_locus_tag=AC57_2265 NZ_JJLR01000085.1 Protein Homology CDS 13555 14832 . - 0 ID=cds-WP_032237802.1;Parent=gene-AC57_RS12960;Dbxref=GenBank:WP_032237802.1;Name=WP_032237802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=AC57_RS12960;product=DUF2254 domain-containing protein;protein_id=WP_032237802.1;transl_table=11 NZ_JJLR01000085.1 RefSeq gene 14895 16892 . - . ID=gene-AC57_RS12955;Name=AC57_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12955;old_locus_tag=AC57_2266 NZ_JJLR01000085.1 Protein Homology CDS 14895 16892 . - 0 ID=cds-WP_032279995.1;Parent=gene-AC57_RS12955;Dbxref=GenBank:WP_032279995.1;Name=WP_032279995.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=AC57_RS12955;product=BCCT family transporter;protein_id=WP_032279995.1;transl_table=11 NZ_JJLR01000085.1 RefSeq pseudogene 17046 17258 . - . ID=gene-AC57_RS12950;Name=AC57_RS12950;end_range=17258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS12950;old_locus_tag=AC57_2267;partial=true;pseudo=true NZ_JJLR01000085.1 Protein Homology CDS 17046 17258 . - 0 ID=cds-AC57_RS12950;Parent=gene-AC57_RS12950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=17258,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC57_RS12950;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000085.1 RefSeq pseudogene 17278 17754 . - . ID=gene-AC57_RS0124385;Name=AC57_RS0124385;end_range=17754,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124385;partial=true;pseudo=true NZ_JJLR01000085.1 Protein Homology CDS 17278 17754 . - 0 ID=cds-AC57_RS0124385;Parent=gene-AC57_RS0124385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=17754,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1;locus_tag=AC57_RS0124385;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000085.1 RefSeq pseudogene 17835 18029 . - . ID=gene-AC57_RS27325;Name=AC57_RS27325;end_range=18029,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27325;old_locus_tag=AC57_2269;partial=true;pseudo=true NZ_JJLR01000085.1 Protein Homology CDS 17835 18029 . - 0 ID=cds-AC57_RS27325;Parent=gene-AC57_RS27325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=18029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS27325;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000086.1 1 51233 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000086.1 RefSeq region 1 51233 . + . ID=NZ_JJLR01000086.1:1..51233;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000086.1 RefSeq gene 1 226 . - . ID=gene-AC57_RS0124390;Name=AC57_RS0124390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124390;old_locus_tag=AC57_2270;partial=true;start_range=.,1 NZ_JJLR01000086.1 Protein Homology CDS 1 226 . - 0 ID=cds-WP_001482752.1-2;Parent=gene-AC57_RS0124390;Dbxref=GenBank:WP_001482752.1;Name=WP_001482752.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124390;partial=true;product=IS1 family transposase;protein_id=WP_001482752.1;start_range=.,1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 260 499 . - . ID=gene-AC57_RS29880;Name=AC57_RS29880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29880 NZ_JJLR01000086.1 GeneMarkS-2+ CDS 260 499 . - 0 ID=cds-WP_148725153.1;Parent=gene-AC57_RS29880;Dbxref=GenBank:WP_148725153.1;Name=WP_148725153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS29880;product=hypothetical protein;protein_id=WP_148725153.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 819 1847 . + . ID=gene-AC57_RS12945;Name=AC57_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12945;old_locus_tag=AC57_2272 NZ_JJLR01000086.1 Protein Homology CDS 819 1847 . + 0 ID=cds-WP_032279676.1;Parent=gene-AC57_RS12945;Dbxref=GenBank:WP_032279676.1;Name=WP_032279676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403702.1;locus_tag=AC57_RS12945;product=WavE lipopolysaccharide synthesis family protein;protein_id=WP_032279676.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 1836 2648 . - . ID=gene-AC57_RS12940;Name=AC57_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12940;old_locus_tag=AC57_2273 NZ_JJLR01000086.1 Protein Homology CDS 1836 2648 . - 0 ID=cds-WP_024249725.1;Parent=gene-AC57_RS12940;Dbxref=GenBank:WP_024249725.1;Name=WP_024249725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.6;locus_tag=AC57_RS12940;product=glycosyltransferase;protein_id=WP_024249725.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 2681 3430 . - . ID=gene-AC57_RS12935;Name=AC57_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12935;old_locus_tag=AC57_2274 NZ_JJLR01000086.1 Protein Homology CDS 2681 3430 . - 0 ID=cds-WP_024249726.1;Parent=gene-AC57_RS12935;Dbxref=GenBank:WP_024249726.1;Name=WP_024249726.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594071.1;locus_tag=AC57_RS12935;product=ABC transporter ATP-binding protein;protein_id=WP_024249726.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 3435 4235 . - . ID=gene-AC57_RS12930;Name=AC57_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12930;old_locus_tag=AC57_2275 NZ_JJLR01000086.1 Protein Homology CDS 3435 4235 . - 0 ID=cds-WP_024249727.1;Parent=gene-AC57_RS12930;Dbxref=GenBank:WP_024249727.1;Name=WP_024249727.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014594070.1;locus_tag=AC57_RS12930;product=ABC transporter permease;protein_id=WP_024249727.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 4228 4932 . - . ID=gene-AC57_RS0124395;Name=AC57_RS0124395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124395 NZ_JJLR01000086.1 Protein Homology CDS 4228 4932 . - 0 ID=cds-WP_024249728.1;Parent=gene-AC57_RS0124395;Dbxref=GenBank:WP_024249728.1;Name=WP_024249728.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403706.1;locus_tag=AC57_RS0124395;product=glycosyltransferase family 2 protein;protein_id=WP_024249728.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 4929 6470 . - . ID=gene-AC57_RS12925;Name=AC57_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12925;old_locus_tag=AC57_2277 NZ_JJLR01000086.1 Protein Homology CDS 4929 6470 . - 0 ID=cds-WP_032237278.1;Parent=gene-AC57_RS12925;Dbxref=GenBank:WP_032237278.1;Name=WP_032237278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403707.1;locus_tag=AC57_RS12925;product=capsular biosynthesis protein;protein_id=WP_032237278.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 6467 6841 . - . ID=gene-AC57_RS12920;Name=AC57_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12920;old_locus_tag=AC57_2278 NZ_JJLR01000086.1 Protein Homology CDS 6467 6841 . - 0 ID=cds-WP_024249730.1;Parent=gene-AC57_RS12920;Dbxref=GenBank:WP_024249730.1;Name=WP_024249730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750177.1;locus_tag=AC57_RS12920;product=capsular biosynthesis protein;protein_id=WP_024249730.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 6855 7625 . - . ID=gene-AC57_RS12915;Name=AC57_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12915;old_locus_tag=AC57_2279 NZ_JJLR01000086.1 GeneMarkS-2+ CDS 6855 7625 . - 0 ID=cds-WP_032237277.1;Parent=gene-AC57_RS12915;Dbxref=GenBank:WP_032237277.1;Name=WP_032237277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS12915;product=hypothetical protein;protein_id=WP_032237277.1;transl_table=11 NZ_JJLR01000086.1 RefSeq pseudogene 7903 8389 . - . ID=gene-AC57_RS29085;Name=AC57_RS29085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29085;partial=true;pseudo=true;start_range=.,7903 NZ_JJLR01000086.1 Protein Homology CDS 7903 8389 . - 0 ID=cds-AC57_RS29085;Parent=gene-AC57_RS29085;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310873.1;locus_tag=AC57_RS29085;partial=true;product=sugar phosphate nucleotidyltransferase;pseudo=true;start_range=.,7903;transl_table=11 NZ_JJLR01000086.1 RefSeq pseudogene 8700 9550 . - . ID=gene-AC57_RS31250;Name=wcaK;end_range=9550,.;gbkey=Gene;gene=wcaK;gene_biotype=pseudogene;locus_tag=AC57_RS31250;partial=true;pseudo=true;start_range=.,8700 NZ_JJLR01000086.1 Protein Homology CDS 8700 9550 . - 0 ID=cds-AC57_RS31250;Parent=gene-AC57_RS31250;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=9550,.;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001750783.1;locus_tag=AC57_RS31250;partial=true;product=colanic acid biosynthesis pyruvyl transferase WcaK;pseudo=true;start_range=.,8700;transl_table=11 NZ_JJLR01000086.1 RefSeq pseudogene 9539 10506 . - . ID=gene-AC57_RS0124410;Name=AC57_RS0124410;end_range=10506,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124410;partial=true;pseudo=true;start_range=.,9539 NZ_JJLR01000086.1 Protein Homology CDS 9539 10506 . - 0 ID=cds-AC57_RS0124410;Parent=gene-AC57_RS0124410;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=10506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=AC57_RS0124410;partial=true;product=MOP flippase family protein;pseudo=true;start_range=.,9539;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 10481 11302 . - . ID=gene-AC57_RS12910;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AC57_RS12910;old_locus_tag=AC57_2287 NZ_JJLR01000086.1 Protein Homology CDS 10481 11302 . - 0 ID=cds-WP_032237276.1;Parent=gene-AC57_RS12910;Dbxref=GenBank:WP_032237276.1;Name=WP_032237276.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310891.1;locus_tag=AC57_RS12910;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_032237276.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 11385 12733 . - . ID=gene-AC57_RS29885;Name=AC57_RS29885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29885 NZ_JJLR01000086.1 Protein Homology CDS 12253 12733 . - 0 ID=cds-WP_106425271.1;Parent=gene-AC57_RS29885;Dbxref=GenBank:WP_106425271.1;Name=WP_106425271.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558234.1;locus_tag=AC57_RS29885;product=IS3 family transposase;protein_id=WP_106425271.1;transl_table=11 NZ_JJLR01000086.1 Protein Homology CDS 11385 12253 . - 2 ID=cds-WP_106425271.1;Parent=gene-AC57_RS29885;Dbxref=GenBank:WP_106425271.1;Name=WP_106425271.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558234.1;locus_tag=AC57_RS29885;product=IS3 family transposase;protein_id=WP_106425271.1;transl_table=11 NZ_JJLR01000086.1 RefSeq pseudogene 12831 14977 . - . ID=gene-AC57_RS0124425;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=pseudogene;locus_tag=AC57_RS0124425;old_locus_tag=AC57_2290;pseudo=true NZ_JJLR01000086.1 Protein Homology CDS 12831 14977 . - 0 ID=cds-AC57_RS0124425;Parent=gene-AC57_RS0124425;Note=frameshifted%3B internal stop;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AC57_RS0124425;product=tyrosine-protein kinase Wzc;pseudo=true;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 14980 15423 . - . ID=gene-AC57_RS12900;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AC57_RS12900;old_locus_tag=AC57_2293 NZ_JJLR01000086.1 Protein Homology CDS 14980 15423 . - 0 ID=cds-WP_000482897.1;Parent=gene-AC57_RS12900;Dbxref=GenBank:WP_000482897.1;Name=WP_000482897.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310893.1;locus_tag=AC57_RS12900;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_000482897.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 15429 16568 . - . ID=gene-AC57_RS12895;Name=wza;gbkey=Gene;gene=wza;gene_biotype=protein_coding;locus_tag=AC57_RS12895;old_locus_tag=AC57_2294 NZ_JJLR01000086.1 Protein Homology CDS 15429 16568 . - 0 ID=cds-WP_032237274.1;Parent=gene-AC57_RS12895;Dbxref=GenBank:WP_032237274.1;Name=WP_032237274.1;gbkey=CDS;gene=wza;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310894.1;locus_tag=AC57_RS12895;product=polysaccharide export protein Wza;protein_id=WP_032237274.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 16877 17026 . + . ID=gene-AC57_RS30280;Name=AC57_RS30280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30280 NZ_JJLR01000086.1 GeneMarkS-2+ CDS 16877 17026 . + 0 ID=cds-WP_157899968.1;Parent=gene-AC57_RS30280;Dbxref=GenBank:WP_157899968.1;Name=WP_157899968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30280;product=hypothetical protein;protein_id=WP_157899968.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 17227 18810 . + . ID=gene-AC57_RS12890;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AC57_RS12890;old_locus_tag=AC57_2295 NZ_JJLR01000086.1 Protein Homology CDS 17227 18810 . + 0 ID=cds-WP_024249786.1;Parent=gene-AC57_RS12890;Dbxref=GenBank:WP_024249786.1;Name=WP_024249786.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310895.2;locus_tag=AC57_RS12890;product=TerC family protein;protein_id=WP_024249786.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 18878 20731 . - . ID=gene-AC57_RS12885;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AC57_RS12885;old_locus_tag=AC57_2296 NZ_JJLR01000086.1 Protein Homology CDS 18878 20731 . - 0 ID=cds-WP_024249785.1;Parent=gene-AC57_RS12885;Dbxref=GenBank:WP_024249785.1;Name=WP_024249785.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416568.1;locus_tag=AC57_RS12885;product=outer membrane assembly protein AsmA;protein_id=WP_024249785.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 20753 21334 . - . ID=gene-AC57_RS12880;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AC57_RS12880;old_locus_tag=AC57_2297 NZ_JJLR01000086.1 Protein Homology CDS 20753 21334 . - 0 ID=cds-WP_001234767.1;Parent=gene-AC57_RS12880;Dbxref=GenBank:WP_001234767.1;Name=WP_001234767.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AC57_RS12880;product=dCTP deaminase;protein_id=WP_001234767.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 21426 22067 . - . ID=gene-AC57_RS12875;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AC57_RS12875;old_locus_tag=AC57_2298 NZ_JJLR01000086.1 Protein Homology CDS 21426 22067 . - 0 ID=cds-WP_001295424.1;Parent=gene-AC57_RS12875;Dbxref=GenBank:WP_001295424.1;Name=WP_001295424.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707960.1;locus_tag=AC57_RS12875;product=uridine kinase;protein_id=WP_001295424.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 22385 25702 . + . ID=gene-AC57_RS12870;Name=dgcE;gbkey=Gene;gene=dgcE;gene_biotype=protein_coding;locus_tag=AC57_RS12870;old_locus_tag=AC57_2299 NZ_JJLR01000086.1 Protein Homology CDS 22385 25702 . + 0 ID=cds-WP_032285710.1;Parent=gene-AC57_RS12870;Dbxref=GenBank:WP_032285710.1;Name=WP_032285710.1;Ontology_term=GO:0005515;gbkey=CDS;gene=dgcE;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=AC57_RS12870;product=diguanylate cyclase;protein_id=WP_032285710.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 25811 26659 . - . ID=gene-AC57_RS12865;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AC57_RS12865;old_locus_tag=AC57_2300 NZ_JJLR01000086.1 Protein Homology CDS 25811 26659 . - 0 ID=cds-WP_024249783.1;Parent=gene-AC57_RS12865;Dbxref=GenBank:WP_024249783.1;Name=WP_024249783.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310904.1;locus_tag=AC57_RS12865;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_024249783.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 26793 28145 . + . ID=gene-AC57_RS12860;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AC57_RS12860;old_locus_tag=AC57_2301 NZ_JJLR01000086.1 Protein Homology CDS 26793 28145 . + 0 ID=cds-WP_032279673.1;Parent=gene-AC57_RS12860;Dbxref=GenBank:WP_032279673.1;Name=WP_032279673.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416573.4;locus_tag=AC57_RS12860;product=molecular chaperone;protein_id=WP_032279673.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 28158 30098 . - . ID=gene-AC57_RS12855;Name=yegI;gbkey=Gene;gene=yegI;gene_biotype=protein_coding;locus_tag=AC57_RS12855;old_locus_tag=AC57_2302 NZ_JJLR01000086.1 Protein Homology CDS 28158 30098 . - 0 ID=cds-WP_024249780.1;Parent=gene-AC57_RS12855;Dbxref=GenBank:WP_024249780.1;Name=WP_024249780.1;gbkey=CDS;gene=yegI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310906.2;locus_tag=AC57_RS12855;product=protein kinase YegI;protein_id=WP_024249780.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 30095 30856 . - . ID=gene-AC57_RS12850;Name=pphC;gbkey=Gene;gene=pphC;gene_biotype=protein_coding;locus_tag=AC57_RS12850;old_locus_tag=AC57_2303 NZ_JJLR01000086.1 Protein Homology CDS 30095 30856 . - 0 ID=cds-WP_032156782.1;Parent=gene-AC57_RS12850;Dbxref=GenBank:WP_032156782.1;Name=WP_032156782.1;Ontology_term=GO:0004722;gbkey=CDS;gene=pphC;go_function=protein serine/threonine phosphatase activity|0004722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707964.1;locus_tag=AC57_RS12850;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_032156782.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 30853 31512 . - . ID=gene-AC57_RS12845;Name=yegL;gbkey=Gene;gene=yegL;gene_biotype=protein_coding;locus_tag=AC57_RS12845;old_locus_tag=AC57_2304 NZ_JJLR01000086.1 Protein Homology CDS 30853 31512 . - 0 ID=cds-WP_032279672.1;Parent=gene-AC57_RS12845;Dbxref=GenBank:WP_032279672.1;Name=WP_032279672.1;gbkey=CDS;gene=yegL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310908.1;locus_tag=AC57_RS12845;product=vWA domain-containing protein;protein_id=WP_032279672.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 31733 31792 . - . ID=gene-AC57_RS27330;Name=ibsA;gbkey=Gene;gene=ibsA;gene_biotype=protein_coding;locus_tag=AC57_RS27330 NZ_JJLR01000086.1 Protein Homology CDS 31733 31792 . - 0 ID=cds-WP_010723109.1;Parent=gene-AC57_RS27330;Dbxref=GenBank:WP_010723109.1;Name=WP_010723109.1;gbkey=CDS;gene=ibsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791247.1;locus_tag=AC57_RS27330;product=type I toxin-antitoxin system toxin IbsA;protein_id=WP_010723109.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 31862 33231 . + . ID=gene-AC57_RS29100;Name=AC57_RS29100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29100 NZ_JJLR01000086.1 Protein Homology CDS 31862 32342 . + 0 ID=cds-WP_113706574.1;Parent=gene-AC57_RS29100;Dbxref=GenBank:WP_113706574.1;Name=WP_113706574.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AC57_RS29100;product=IS3-like element IS150 family transposase;protein_id=WP_113706574.1;transl_table=11 NZ_JJLR01000086.1 Protein Homology CDS 32342 33231 . + 2 ID=cds-WP_113706574.1;Parent=gene-AC57_RS29100;Dbxref=GenBank:WP_113706574.1;Name=WP_113706574.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611947.1;locus_tag=AC57_RS29100;product=IS3-like element IS150 family transposase;protein_id=WP_113706574.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 33516 34763 . + . ID=gene-AC57_RS12830;Name=mdtA;gbkey=Gene;gene=mdtA;gene_biotype=protein_coding;locus_tag=AC57_RS12830;old_locus_tag=AC57_2307 NZ_JJLR01000086.1 Protein Homology CDS 33516 34763 . + 0 ID=cds-WP_032237269.1;Parent=gene-AC57_RS12830;Dbxref=GenBank:WP_032237269.1;Name=WP_032237269.1;gbkey=CDS;gene=mdtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310909.2;locus_tag=AC57_RS12830;product=multidrug efflux RND transporter subunit MdtA;protein_id=WP_032237269.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 34763 37885 . + . ID=gene-AC57_RS12825;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AC57_RS12825;old_locus_tag=AC57_2308 NZ_JJLR01000086.1 Protein Homology CDS 34763 37885 . + 0 ID=cds-WP_001197875.1;Parent=gene-AC57_RS12825;Dbxref=GenBank:WP_001197875.1;Name=WP_001197875.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416579.1;locus_tag=AC57_RS12825;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_001197875.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 37886 40963 . + . ID=gene-AC57_RS12820;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AC57_RS12820;old_locus_tag=AC57_2309 NZ_JJLR01000086.1 Protein Homology CDS 37886 40963 . + 0 ID=cds-WP_032279671.1;Parent=gene-AC57_RS12820;Dbxref=GenBank:WP_032279671.1;Name=WP_032279671.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AC57_RS12820;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_032279671.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 40964 42379 . + . ID=gene-AC57_RS12815;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AC57_RS12815;old_locus_tag=AC57_2310 NZ_JJLR01000086.1 Protein Homology CDS 40964 42379 . + 0 ID=cds-WP_032237266.1;Parent=gene-AC57_RS12815;Dbxref=GenBank:WP_032237266.1;Name=WP_032237266.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416581.1;locus_tag=AC57_RS12815;product=MFS transporter;protein_id=WP_032237266.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 42376 43779 . + . ID=gene-AC57_RS12810;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AC57_RS12810;old_locus_tag=AC57_2311 NZ_JJLR01000086.1 Protein Homology CDS 42376 43779 . + 0 ID=cds-WP_000675150.1;Parent=gene-AC57_RS12810;Dbxref=GenBank:WP_000675150.1;Name=WP_000675150.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416582.1;locus_tag=AC57_RS12810;product=two-component system sensor histidine kinase BaeS;protein_id=WP_000675150.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 43776 44498 . + . ID=gene-AC57_RS12805;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AC57_RS12805;old_locus_tag=AC57_2312 NZ_JJLR01000086.1 Protein Homology CDS 43776 44498 . + 0 ID=cds-WP_000137877.1;Parent=gene-AC57_RS12805;Dbxref=GenBank:WP_000137877.1;Name=WP_000137877.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AC57_RS12805;product=two-component system response regulator BaeR;protein_id=WP_000137877.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 44689 45021 . + . ID=gene-AC57_RS12800;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AC57_RS12800;old_locus_tag=AC57_2313 NZ_JJLR01000086.1 Protein Homology CDS 44689 45021 . + 0 ID=cds-WP_000929408.1;Parent=gene-AC57_RS12800;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AC57_RS12800;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 45168 46529 . + . ID=gene-AC57_RS12795;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AC57_RS12795;old_locus_tag=AC57_2314 NZ_JJLR01000086.1 Protein Homology CDS 45168 46529 . + 0 ID=cds-WP_000476014.1;Parent=gene-AC57_RS12795;Dbxref=GenBank:WP_000476014.1;Name=WP_000476014.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=AC57_RS12795;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476014.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 46860 47177 . - . ID=gene-AC57_RS12790;Name=yegR;gbkey=Gene;gene=yegR;gene_biotype=protein_coding;locus_tag=AC57_RS12790;old_locus_tag=AC57_2315 NZ_JJLR01000086.1 Protein Homology CDS 46860 47177 . - 0 ID=cds-WP_001318299.1;Parent=gene-AC57_RS12790;Dbxref=GenBank:WP_001318299.1;Name=WP_001318299.1;gbkey=CDS;gene=yegR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416589.2;locus_tag=AC57_RS12790;product=protein YegR;protein_id=WP_001318299.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 47583 48482 . + . ID=gene-AC57_RS12785;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AC57_RS12785;old_locus_tag=AC57_2316 NZ_JJLR01000086.1 Protein Homology CDS 47583 48482 . + 0 ID=cds-WP_000807361.1;Parent=gene-AC57_RS12785;Dbxref=GenBank:WP_000807361.1;Name=WP_000807361.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310919.1;locus_tag=AC57_RS12785;product=lipid kinase YegS;protein_id=WP_000807361.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 48564 49337 . - . ID=gene-AC57_RS12780;Name=AC57_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12780;old_locus_tag=AC57_2317 NZ_JJLR01000086.1 Protein Homology CDS 48564 49337 . - 0 ID=cds-WP_001295426.1;Parent=gene-AC57_RS12780;Dbxref=GenBank:WP_001295426.1;Name=WP_001295426.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083894.1;locus_tag=AC57_RS12780;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001295426.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 49443 50483 . - . ID=gene-AC57_RS12775;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=AC57_RS12775;old_locus_tag=AC57_2318 NZ_JJLR01000086.1 Protein Homology CDS 49443 50483 . - 0 ID=cds-WP_000844227.1;Parent=gene-AC57_RS12775;Dbxref=GenBank:WP_000844227.1;Name=WP_000844227.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AC57_RS12775;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_000844227.1;transl_table=11 NZ_JJLR01000086.1 RefSeq gene 50531 51233 . - . ID=gene-AC57_RS12770;Name=AC57_RS12770;end_range=51233,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12770;old_locus_tag=AC57_2319;partial=true NZ_JJLR01000086.1 Protein Homology CDS 50531 51233 . - 1 ID=cds-WP_032285711.1;Parent=gene-AC57_RS12770;Dbxref=GenBank:WP_032285711.1;Name=WP_032285711.1;Ontology_term=GO:0009401,GO:0016020;end_range=51233,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AC57_RS12770;partial=true;product=PTS transporter subunit IIC;protein_id=WP_032285711.1;transl_table=11 ##sequence-region NZ_JJLR01000087.1 1 72333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000087.1 RefSeq region 1 72333 . + . ID=NZ_JJLR01000087.1:1..72333;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000087.1 RefSeq pseudogene 1 340 . + . ID=gene-AC57_RS0124445;Name=AC57_RS0124445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124445;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000087.1 Protein Homology CDS 1 340 . + 1 ID=cds-AC57_RS0124445;Parent=gene-AC57_RS0124445;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124445;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 275 1552 . - . ID=gene-AC57_RS12765;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=AC57_RS12765;old_locus_tag=AC57_2320 NZ_JJLR01000087.1 Protein Homology CDS 275 1552 . - 0 ID=cds-WP_071999879.1;Parent=gene-AC57_RS12765;Dbxref=GenBank:WP_071999879.1;Name=WP_071999879.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013509061.1;locus_tag=AC57_RS12765;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_071999879.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 1581 2435 . - . ID=gene-AC57_RS12760;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=AC57_RS12760;old_locus_tag=AC57_2321 NZ_JJLR01000087.1 Protein Homology CDS 1581 2435 . - 0 ID=cds-WP_000289788.1;Parent=gene-AC57_RS12760;Dbxref=GenBank:WP_000289788.1;Name=WP_000289788.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=AC57_RS12760;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_000289788.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 2744 3796 . - . ID=gene-AC57_RS12755;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AC57_RS12755;old_locus_tag=AC57_2322 NZ_JJLR01000087.1 Protein Homology CDS 2744 3796 . - 0 ID=cds-WP_000129551.1;Parent=gene-AC57_RS12755;Dbxref=GenBank:WP_000129551.1;Name=WP_000129551.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AC57_RS12755;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 4053 5330 . + . ID=gene-AC57_RS12750;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AC57_RS12750;old_locus_tag=AC57_2323 NZ_JJLR01000087.1 Protein Homology CDS 4053 5330 . + 0 ID=cds-WP_000858501.1;Parent=gene-AC57_RS12750;Dbxref=GenBank:WP_000858501.1;Name=WP_000858501.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;gene=yegT;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AC57_RS12750;product=nucleoside permease;protein_id=WP_000858501.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 5327 6331 . + . ID=gene-AC57_RS12745;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AC57_RS12745;old_locus_tag=AC57_2324 NZ_JJLR01000087.1 Protein Homology CDS 5327 6331 . + 0 ID=cds-WP_032279590.1;Parent=gene-AC57_RS12745;Dbxref=GenBank:WP_032279590.1;Name=WP_032279590.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AC57_RS12745;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_032279590.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 6328 7293 . + . ID=gene-AC57_RS12740;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AC57_RS12740;old_locus_tag=AC57_2325 NZ_JJLR01000087.1 Protein Homology CDS 6328 7293 . + 0 ID=cds-WP_032279591.1;Parent=gene-AC57_RS12740;Dbxref=GenBank:WP_032279591.1;Name=WP_032279591.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AC57_RS12740;product=carbohydrate kinase family protein;protein_id=WP_032279591.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 7267 8013 . - . ID=gene-AC57_RS12735;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AC57_RS12735;old_locus_tag=AC57_2326 NZ_JJLR01000087.1 Protein Homology CDS 7267 8013 . - 0 ID=cds-WP_000434038.1;Parent=gene-AC57_RS12735;Dbxref=GenBank:WP_000434038.1;Name=WP_000434038.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AC57_RS12735;product=GntR family transcriptional regulator;protein_id=WP_000434038.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 8065 8883 . - . ID=gene-AC57_RS12730;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=protein_coding;locus_tag=AC57_RS12730;old_locus_tag=AC57_2327 NZ_JJLR01000087.1 Protein Homology CDS 8065 8883 . - 0 ID=cds-WP_001300994.1;Parent=gene-AC57_RS12730;Dbxref=GenBank:WP_001300994.1;Name=WP_001300994.1;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AC57_RS12730;product=glycoside hydrolase family 25 protein;protein_id=WP_001300994.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 8948 9748 . - . ID=gene-AC57_RS12725;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AC57_RS12725;old_locus_tag=AC57_2328 NZ_JJLR01000087.1 Protein Homology CDS 8948 9748 . - 0 ID=cds-WP_000822274.1;Parent=gene-AC57_RS12725;Dbxref=GenBank:WP_000822274.1;Name=WP_000822274.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AC57_RS12725;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_000822274.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 9745 10533 . - . ID=gene-AC57_RS12720;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AC57_RS12720;old_locus_tag=AC57_2329 NZ_JJLR01000087.1 Protein Homology CDS 9745 10533 . - 0 ID=cds-WP_032279593.1;Parent=gene-AC57_RS12720;Dbxref=GenBank:WP_032279593.1;Name=WP_032279593.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707990.1;locus_tag=AC57_RS12720;product=hydroxyethylthiazole kinase;protein_id=WP_032279593.1;transl_table=11 NZ_JJLR01000087.1 cmsearch riboswitch 10568 10664 . - . ID=id-NZ_JJLR01000087.1:10568..10664;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLR01000087.1 RefSeq gene 10756 11028 . - . ID=gene-AC57_RS12715;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AC57_RS12715;old_locus_tag=AC57_2330 NZ_JJLR01000087.1 Protein Homology CDS 10756 11028 . - 0 ID=cds-WP_000019944.1;Parent=gene-AC57_RS12715;Dbxref=GenBank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AC57_RS12715;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 11149 11982 . + . ID=gene-AC57_RS12710;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AC57_RS12710;old_locus_tag=AC57_2331 NZ_JJLR01000087.1 Protein Homology CDS 11149 11982 . + 0 ID=cds-WP_032237035.1;Parent=gene-AC57_RS12710;Dbxref=GenBank:WP_032237035.1;Name=WP_032237035.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AC57_RS12710;product=nickel/cobalt efflux protein RcnA;protein_id=WP_032237035.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 12200 12538 . + . ID=gene-AC57_RS12705;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AC57_RS12705;old_locus_tag=AC57_2332 NZ_JJLR01000087.1 Protein Homology CDS 12200 12538 . + 0 ID=cds-WP_000153067.1;Parent=gene-AC57_RS12705;Dbxref=GenBank:WP_000153067.1;Name=WP_000153067.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416610.4;locus_tag=AC57_RS12705;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153067.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 12620 13654 . - . ID=gene-AC57_RS12700;Name=yehA;gbkey=Gene;gene=yehA;gene_biotype=protein_coding;locus_tag=AC57_RS12700;old_locus_tag=AC57_2333 NZ_JJLR01000087.1 Protein Homology CDS 12620 13654 . - 0 ID=cds-WP_032237036.1;Parent=gene-AC57_RS12700;Dbxref=GenBank:WP_032237036.1;Name=WP_032237036.1;gbkey=CDS;gene=yehA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AC57_RS12700;product=putative fimbrial-like adhesin protein;protein_id=WP_032237036.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 13670 16150 . - . ID=gene-AC57_RS12695;Name=yehB;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=AC57_RS12695;old_locus_tag=AC57_2334 NZ_JJLR01000087.1 Protein Homology CDS 13670 16150 . - 0 ID=cds-WP_032279594.1;Parent=gene-AC57_RS12695;Dbxref=GenBank:WP_032279594.1;Name=WP_032279594.1;gbkey=CDS;gene=yehB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416612.1;locus_tag=AC57_RS12695;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_032279594.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 16166 16840 . - . ID=gene-AC57_RS12690;Name=yehC;gbkey=Gene;gene=yehC;gene_biotype=protein_coding;locus_tag=AC57_RS12690;old_locus_tag=AC57_2335 NZ_JJLR01000087.1 Protein Homology CDS 16166 16840 . - 0 ID=cds-WP_000677393.1;Parent=gene-AC57_RS12690;Dbxref=GenBank:WP_000677393.1;Name=WP_000677393.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yehC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310943.1;locus_tag=AC57_RS12690;product=fimbria/pilus periplasmic chaperone;protein_id=WP_000677393.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 16921 17463 . - . ID=gene-AC57_RS12685;Name=yehD;gbkey=Gene;gene=yehD;gene_biotype=protein_coding;locus_tag=AC57_RS12685;old_locus_tag=AC57_2336 NZ_JJLR01000087.1 Protein Homology CDS 16921 17463 . - 0 ID=cds-WP_001547500.1;Parent=gene-AC57_RS12685;Dbxref=GenBank:WP_001547500.1;Name=WP_001547500.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yehD;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707997.1;locus_tag=AC57_RS12685;product=fimbrial protein;protein_id=WP_001547500.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 17756 18037 . - . ID=gene-AC57_RS0124455;Name=yehE;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=AC57_RS0124455 NZ_JJLR01000087.1 Protein Homology CDS 17756 18037 . - 0 ID=cds-WP_001324851.1;Parent=gene-AC57_RS0124455;Dbxref=GenBank:WP_001324851.1;Name=WP_001324851.1;gbkey=CDS;gene=yehE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416615.1;locus_tag=AC57_RS0124455;product=YehE family protein;protein_id=WP_001324851.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 18300 19409 . - . ID=gene-AC57_RS12680;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AC57_RS12680;old_locus_tag=AC57_2338 NZ_JJLR01000087.1 Protein Homology CDS 18300 19409 . - 0 ID=cds-WP_001005448.1;Parent=gene-AC57_RS12680;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AC57_RS12680;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 19541 21574 . + . ID=gene-AC57_RS12675;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AC57_RS12675;old_locus_tag=AC57_2339 NZ_JJLR01000087.1 Protein Homology CDS 19541 21574 . + 0 ID=cds-WP_001300883.1;Parent=gene-AC57_RS12675;Dbxref=GenBank:WP_001300883.1;Name=WP_001300883.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=AC57_RS12675;product=methionine--tRNA ligase;protein_id=WP_001300883.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 21715 25509 . + . ID=gene-AC57_RS12670;Name=AC57_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12670;old_locus_tag=AC57_2340 NZ_JJLR01000087.1 Protein Homology CDS 21715 25509 . + 0 ID=cds-WP_001215617.1;Parent=gene-AC57_RS12670;Dbxref=GenBank:WP_001215617.1;Name=WP_001215617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001215568.1;locus_tag=AC57_RS12670;product=DUF4132 domain-containing protein;protein_id=WP_001215617.1;transl_table=11 NZ_JJLR01000087.1 RefSeq pseudogene 25519 29152 . + . ID=gene-AC57_RS0124460;Name=yehI;gbkey=Gene;gene=yehI;gene_biotype=pseudogene;locus_tag=AC57_RS0124460;old_locus_tag=AC57_2341;pseudo=true NZ_JJLR01000087.1 Protein Homology CDS 25519 29152 . + 0 ID=cds-AC57_RS0124460;Parent=gene-AC57_RS0124460;Note=frameshifted%3B internal stop;gbkey=CDS;gene=yehI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416621.1;locus_tag=AC57_RS0124460;product=DUF4132 domain-containing protein YehI;pseudo=true;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 29213 29530 . + . ID=gene-AC57_RS0124465;Name=yehK;gbkey=Gene;gene=yehK;gene_biotype=protein_coding;locus_tag=AC57_RS0124465 NZ_JJLR01000087.1 Protein Homology CDS 29213 29530 . + 0 ID=cds-WP_000636925.1;Parent=gene-AC57_RS0124465;Dbxref=GenBank:WP_000636925.1;Name=WP_000636925.1;gbkey=CDS;gene=yehK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588459.1;locus_tag=AC57_RS0124465;product=protein YehK;protein_id=WP_000636925.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 29837 30925 . + . ID=gene-AC57_RS12665;Name=yehL;gbkey=Gene;gene=yehL;gene_biotype=protein_coding;locus_tag=AC57_RS12665;old_locus_tag=AC57_2343 NZ_JJLR01000087.1 Protein Homology CDS 29837 30925 . + 0 ID=cds-WP_032279595.1;Parent=gene-AC57_RS12665;Dbxref=GenBank:WP_032279595.1;Name=WP_032279595.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yehL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416623.2;locus_tag=AC57_RS12665;product=ATP-binding protein;protein_id=WP_032279595.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 30936 33215 . + . ID=gene-AC57_RS12660;Name=yehM;gbkey=Gene;gene=yehM;gene_biotype=protein_coding;locus_tag=AC57_RS12660;old_locus_tag=AC57_2344 NZ_JJLR01000087.1 Protein Homology CDS 30936 33215 . + 0 ID=cds-WP_001294387.1;Parent=gene-AC57_RS12660;Dbxref=GenBank:WP_001294387.1;Name=WP_001294387.1;gbkey=CDS;gene=yehM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416624.1;locus_tag=AC57_RS12660;product=DUF5682 family protein;protein_id=WP_001294387.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 33208 34344 . + . ID=gene-AC57_RS12655;Name=yehP;gbkey=Gene;gene=yehP;gene_biotype=protein_coding;locus_tag=AC57_RS12655;old_locus_tag=AC57_2345 NZ_JJLR01000087.1 Protein Homology CDS 33208 34344 . + 0 ID=cds-WP_032285712.1;Parent=gene-AC57_RS12655;Dbxref=GenBank:WP_032285712.1;Name=WP_032285712.1;gbkey=CDS;gene=yehP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416625.1;locus_tag=AC57_RS12655;product=vWA domain-containing protein;protein_id=WP_032285712.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 34341 36341 . + . ID=gene-AC57_RS12650;Name=yehQ;gbkey=Gene;gene=yehQ;gene_biotype=protein_coding;locus_tag=AC57_RS12650;old_locus_tag=AC57_2346 NZ_JJLR01000087.1 Protein Homology CDS 34341 36341 . + 0 ID=cds-WP_032285713.1;Parent=gene-AC57_RS12650;Dbxref=GenBank:WP_032285713.1;Name=WP_032285713.1;Ontology_term=GO:0008270;gbkey=CDS;gene=yehQ;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AC57_RS12650;product=SWIM zinc finger family protein;protein_id=WP_032285713.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 36466 36927 . + . ID=gene-AC57_RS12645;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AC57_RS12645;old_locus_tag=AC57_2347 NZ_JJLR01000087.1 Protein Homology CDS 36466 36927 . + 0 ID=cds-WP_001373589.1;Parent=gene-AC57_RS12645;Dbxref=GenBank:WP_001373589.1;Name=WP_001373589.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AC57_RS12645;product=YehR family lipoprotein;protein_id=WP_001373589.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 36968 37438 . - . ID=gene-AC57_RS12640;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AC57_RS12640;old_locus_tag=AC57_2348 NZ_JJLR01000087.1 Protein Homology CDS 36968 37438 . - 0 ID=cds-WP_001295430.1;Parent=gene-AC57_RS12640;Dbxref=GenBank:WP_001295430.1;Name=WP_001295430.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310962.1;locus_tag=AC57_RS12640;product=DUF1456 family protein;protein_id=WP_001295430.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 37485 38204 . - . ID=gene-AC57_RS12635;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AC57_RS12635;old_locus_tag=AC57_2349 NZ_JJLR01000087.1 Protein Homology CDS 37485 38204 . - 0 ID=cds-WP_000598641.1;Parent=gene-AC57_RS12635;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AC57_RS12635;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 38201 39886 . - . ID=gene-AC57_RS12630;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AC57_RS12630;old_locus_tag=AC57_2350 NZ_JJLR01000087.1 Protein Homology CDS 38201 39886 . - 0 ID=cds-WP_001295431.1;Parent=gene-AC57_RS12630;Dbxref=GenBank:WP_001295431.1;Name=WP_001295431.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AC57_RS12630;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_001295431.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 40108 40839 . + . ID=gene-AC57_RS12625;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AC57_RS12625;old_locus_tag=AC57_2351 NZ_JJLR01000087.1 Protein Homology CDS 40108 40839 . + 0 ID=cds-WP_001240401.1;Parent=gene-AC57_RS12625;Dbxref=GenBank:WP_001240401.1;Name=WP_001240401.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AC57_RS12625;product=HTH-type transcriptional regulator MlrA;protein_id=WP_001240401.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 40899 41006 . + . ID=gene-AC57_RS0124470;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AC57_RS0124470 NZ_JJLR01000087.1 Protein Homology CDS 40899 41006 . + 0 ID=cds-WP_001216963.1;Parent=gene-AC57_RS0124470;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AC57_RS0124470;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 40987 41718 . - . ID=gene-AC57_RS12620;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AC57_RS12620;old_locus_tag=AC57_2352 NZ_JJLR01000087.1 Protein Homology CDS 40987 41718 . - 0 ID=cds-WP_000783120.1;Parent=gene-AC57_RS12620;Dbxref=GenBank:WP_000783120.1;Name=WP_000783120.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AC57_RS12620;product=glycine betaine ABC transporter permease YehW;protein_id=WP_000783120.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 41723 42649 . - . ID=gene-AC57_RS12615;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AC57_RS12615;old_locus_tag=AC57_2353 NZ_JJLR01000087.1 Protein Homology CDS 41723 42649 . - 0 ID=cds-WP_032279601.1;Parent=gene-AC57_RS12615;Dbxref=GenBank:WP_032279601.1;Name=WP_032279601.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311043.1;locus_tag=AC57_RS12615;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_032279601.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 42642 43799 . - . ID=gene-AC57_RS12610;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AC57_RS12610;old_locus_tag=AC57_2354 NZ_JJLR01000087.1 Protein Homology CDS 42642 43799 . - 0 ID=cds-WP_000220837.1;Parent=gene-AC57_RS12610;Dbxref=GenBank:WP_000220837.1;Name=WP_000220837.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416634.1;locus_tag=AC57_RS12610;product=glycine betaine ABC transporter permease YehY;protein_id=WP_000220837.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 43806 44723 . - . ID=gene-AC57_RS12605;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AC57_RS12605;old_locus_tag=AC57_2355 NZ_JJLR01000087.1 Protein Homology CDS 43806 44723 . - 0 ID=cds-WP_001130308.1;Parent=gene-AC57_RS12605;Dbxref=GenBank:WP_001130308.1;Name=WP_001130308.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416635.1;locus_tag=AC57_RS12605;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_001130308.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 44934 47231 . - . ID=gene-AC57_RS12600;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AC57_RS12600;old_locus_tag=AC57_2356 NZ_JJLR01000087.1 Protein Homology CDS 44934 47231 . - 0 ID=cds-WP_000871512.1;Parent=gene-AC57_RS12600;Dbxref=GenBank:WP_000871512.1;Name=WP_000871512.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AC57_RS12600;product=beta-glucosidase BglX;protein_id=WP_000871512.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 47427 49142 . + . ID=gene-AC57_RS12595;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AC57_RS12595;old_locus_tag=AC57_2357 NZ_JJLR01000087.1 Protein Homology CDS 47427 49142 . + 0 ID=cds-WP_000097369.1;Parent=gene-AC57_RS12595;Dbxref=GenBank:WP_000097369.1;Name=WP_000097369.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AC57_RS12595;product=D-lactate dehydrogenase;protein_id=WP_000097369.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 49180 50112 . - . ID=gene-AC57_RS12590;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AC57_RS12590;old_locus_tag=AC57_2358 NZ_JJLR01000087.1 Protein Homology CDS 49180 50112 . - 0 ID=cds-WP_001295432.1;Parent=gene-AC57_RS12590;Dbxref=GenBank:WP_001295432.1;Name=WP_001295432.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311048.2;locus_tag=AC57_RS12590;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_001295432.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 50286 50873 . - . ID=gene-AC57_RS12585;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AC57_RS12585;old_locus_tag=AC57_2360 NZ_JJLR01000087.1 Protein Homology CDS 50286 50873 . - 0 ID=cds-WP_001295454.1;Parent=gene-AC57_RS12585;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AC57_RS12585;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 51043 51621 . + . ID=gene-AC57_RS12580;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AC57_RS12580;old_locus_tag=AC57_2361 NZ_JJLR01000087.1 Protein Homology CDS 51043 51621 . + 0 ID=cds-WP_001300768.1;Parent=gene-AC57_RS12580;Dbxref=GenBank:WP_001300768.1;Name=WP_001300768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AC57_RS12580;product=DedA family protein;protein_id=WP_001300768.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 51751 52512 . - . ID=gene-AC57_RS12575;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AC57_RS12575;old_locus_tag=AC57_2362 NZ_JJLR01000087.1 Protein Homology CDS 51751 52512 . - 0 ID=cds-WP_000079538.1;Parent=gene-AC57_RS12575;Dbxref=GenBank:WP_000079538.1;Name=WP_000079538.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416641.1;locus_tag=AC57_RS12575;product=SDR family oxidoreductase;protein_id=WP_000079538.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 52565 54001 . - . ID=gene-AC57_RS12570;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AC57_RS12570;old_locus_tag=AC57_2363 NZ_JJLR01000087.1 Protein Homology CDS 52565 54001 . - 0 ID=cds-WP_032237041.1;Parent=gene-AC57_RS12570;Dbxref=GenBank:WP_032237041.1;Name=WP_032237041.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AC57_RS12570;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_032237041.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 54225 54308 . + . ID=gene-AC57_RS0124475;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AC57_RS0124475 NZ_JJLR01000087.1 Protein Homology CDS 54225 54308 . + 0 ID=cds-WP_000691708.1;Parent=gene-AC57_RS0124475;Dbxref=GenBank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AC57_RS0124475;product=small membrane protein YohP;protein_id=WP_000691708.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 54681 55628 . - . ID=gene-AC57_RS12565;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AC57_RS12565;old_locus_tag=AC57_2364 NZ_JJLR01000087.1 Protein Homology CDS 54681 55628 . - 0 ID=cds-WP_001264861.1;Parent=gene-AC57_RS12565;Dbxref=GenBank:WP_001264861.1;Name=WP_001264861.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416645.1;locus_tag=AC57_RS12565;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_001264861.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 55867 56265 . + . ID=gene-AC57_RS12560;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AC57_RS12560;old_locus_tag=AC57_2365 NZ_JJLR01000087.1 Protein Homology CDS 55867 56265 . + 0 ID=cds-WP_001295452.1;Parent=gene-AC57_RS12560;Dbxref=GenBank:WP_001295452.1;Name=WP_001295452.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416646.1;locus_tag=AC57_RS12560;product=CidA/LrgA family protein;protein_id=WP_001295452.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 56262 56957 . + . ID=gene-AC57_RS12555;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AC57_RS12555;old_locus_tag=AC57_2366 NZ_JJLR01000087.1 Protein Homology CDS 56262 56957 . + 0 ID=cds-WP_000968208.1;Parent=gene-AC57_RS12555;Dbxref=GenBank:WP_000968208.1;Name=WP_000968208.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AC57_RS12555;product=CidB/LrgB family autolysis modulator;protein_id=WP_000968208.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 57087 57971 . + . ID=gene-AC57_RS12550;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AC57_RS12550;old_locus_tag=AC57_2367 NZ_JJLR01000087.1 Protein Homology CDS 57087 57971 . + 0 ID=cds-WP_000553555.1;Parent=gene-AC57_RS12550;Dbxref=GenBank:WP_000553555.1;Name=WP_000553555.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AC57_RS12550;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 58121 58840 . + . ID=gene-AC57_RS12545;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AC57_RS12545;old_locus_tag=AC57_2368 NZ_JJLR01000087.1 Protein Homology CDS 58121 58840 . + 0 ID=cds-WP_000920064.1;Parent=gene-AC57_RS12545;Dbxref=GenBank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AC57_RS12545;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 58843 59082 . + . ID=gene-AC57_RS12540;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AC57_RS12540;old_locus_tag=AC57_2369 NZ_JJLR01000087.1 Protein Homology CDS 58843 59082 . + 0 ID=cds-WP_000383096.1;Parent=gene-AC57_RS12540;Dbxref=GenBank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AC57_RS12540;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 59276 60514 . + . ID=gene-AC57_RS12535;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AC57_RS12535;old_locus_tag=AC57_2370 NZ_JJLR01000087.1 Protein Homology CDS 59276 60514 . + 0 ID=cds-WP_001136393.1;Parent=gene-AC57_RS12535;Dbxref=GenBank:WP_001136393.1;Name=WP_001136393.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416651.1;locus_tag=AC57_RS12535;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_001136393.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 60508 61743 . + . ID=gene-AC57_RS12530;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AC57_RS12530;old_locus_tag=AC57_2371 NZ_JJLR01000087.1 Protein Homology CDS 60508 61743 . + 0 ID=cds-WP_000956071.1;Parent=gene-AC57_RS12530;Dbxref=GenBank:WP_000956071.1;Name=WP_000956071.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AC57_RS12530;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_000956071.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 61986 62996 . - . ID=gene-AC57_RS12525;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AC57_RS12525;old_locus_tag=AC57_2373 NZ_JJLR01000087.1 Protein Homology CDS 61986 62996 . - 0 ID=cds-WP_001275118.1;Parent=gene-AC57_RS12525;Dbxref=GenBank:WP_001275118.1;Name=WP_001275118.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AC57_RS12525;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_001275118.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 63012 64532 . - . ID=gene-AC57_RS12520;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AC57_RS12520;old_locus_tag=AC57_2374 NZ_JJLR01000087.1 Protein Homology CDS 63012 64532 . - 0 ID=cds-WP_032279603.1;Parent=gene-AC57_RS12520;Dbxref=GenBank:WP_032279603.1;Name=WP_032279603.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AC57_RS12520;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_032279603.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 64593 65591 . - . ID=gene-AC57_RS12515;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AC57_RS12515;old_locus_tag=AC57_2375 NZ_JJLR01000087.1 Protein Homology CDS 64593 65591 . - 0 ID=cds-WP_001036964.1;Parent=gene-AC57_RS12515;Dbxref=GenBank:WP_001036964.1;Name=WP_001036964.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AC57_RS12515;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_001036964.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 65871 66911 . - . ID=gene-AC57_RS12510;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AC57_RS12510;old_locus_tag=AC57_2376 NZ_JJLR01000087.1 Protein Homology CDS 65871 66911 . - 0 ID=cds-WP_000628659.1;Parent=gene-AC57_RS12510;Dbxref=GenBank:WP_000628659.1;Name=WP_000628659.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=AC57_RS12510;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628659.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 67053 68210 . - . ID=gene-AC57_RS12505;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AC57_RS12505;old_locus_tag=AC57_2377 NZ_JJLR01000087.1 Protein Homology CDS 67053 68210 . - 0 ID=cds-WP_000440922.1;Parent=gene-AC57_RS12505;Dbxref=GenBank:WP_000440922.1;Name=WP_000440922.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=AC57_RS12505;product=DUF418 domain-containing protein YeiB;protein_id=WP_000440922.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 68227 68895 . - . ID=gene-AC57_RS12500;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AC57_RS12500;old_locus_tag=AC57_2378 NZ_JJLR01000087.1 Protein Homology CDS 68227 68895 . - 0 ID=cds-WP_001139613.1;Parent=gene-AC57_RS12500;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AC57_RS12500;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 69153 69989 . + . ID=gene-AC57_RS12495;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AC57_RS12495;old_locus_tag=AC57_2379 NZ_JJLR01000087.1 Protein Homology CDS 69153 69989 . + 0 ID=cds-WP_000425438.1;Parent=gene-AC57_RS12495;Dbxref=GenBank:WP_000425438.1;Name=WP_000425438.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416659.1;locus_tag=AC57_RS12495;product=S-formylglutathione hydrolase;protein_id=WP_000425438.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 70021 72012 . - . ID=gene-AC57_RS12490;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=AC57_RS12490;old_locus_tag=AC57_2380 NZ_JJLR01000087.1 Protein Homology CDS 70021 72012 . - 0 ID=cds-WP_000489247.1;Parent=gene-AC57_RS12490;Dbxref=GenBank:WP_000489247.1;Name=WP_000489247.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416660.1;locus_tag=AC57_RS12490;product=catecholate siderophore receptor CirA;protein_id=WP_000489247.1;transl_table=11 NZ_JJLR01000087.1 RefSeq gene 72077 72333 . - . ID=gene-AC57_RS12485;Name=AC57_RS12485;end_range=72333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12485;old_locus_tag=AC57_2381;partial=true NZ_JJLR01000087.1 Protein Homology CDS 72077 72333 . - 2 ID=cds-WP_000363925.1-5;Parent=gene-AC57_RS12485;Dbxref=GenBank:WP_000363925.1;Name=WP_000363925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=72333,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS12485;partial=true;product=IS1 family transposase;protein_id=WP_000363925.1;transl_table=11 ##sequence-region NZ_JJLR01000088.1 1 117761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000088.1 RefSeq region 1 117761 . + . ID=NZ_JJLR01000088.1:1..117761;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000088.1 RefSeq gene 1 255 . - . ID=gene-AC57_RS0124490;Name=AC57_RS0124490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124490;old_locus_tag=AC57_2382;partial=true;start_range=.,1 NZ_JJLR01000088.1 Protein Homology CDS 1 255 . - 0 ID=cds-WP_001473916.1;Parent=gene-AC57_RS0124490;Dbxref=GenBank:WP_001473916.1;Name=WP_001473916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124490;partial=true;product=IS1-like element transposase;protein_id=WP_001473916.1;start_range=.,1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 564 2033 . - . ID=gene-AC57_RS12480;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AC57_RS12480;old_locus_tag=AC57_2384 NZ_JJLR01000088.1 Protein Homology CDS 564 2033 . - 0 ID=cds-WP_000253273.1;Parent=gene-AC57_RS12480;Dbxref=GenBank:WP_000253273.1;Name=WP_000253273.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AC57_RS12480;product=lysine-specific permease;protein_id=WP_000253273.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 2238 3119 . - . ID=gene-AC57_RS12475;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AC57_RS12475;old_locus_tag=AC57_2385 NZ_JJLR01000088.1 Protein Homology CDS 2238 3119 . - 0 ID=cds-WP_032279476.1;Parent=gene-AC57_RS12475;Dbxref=GenBank:WP_032279476.1;Name=WP_032279476.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AC57_RS12475;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_032279476.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 3218 4267 . + . ID=gene-AC57_RS12470;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AC57_RS12470;old_locus_tag=AC57_2386 NZ_JJLR01000088.1 Protein Homology CDS 3218 4267 . + 0 ID=cds-WP_032237047.1;Parent=gene-AC57_RS12470;Dbxref=GenBank:WP_032237047.1;Name=WP_032237047.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AC57_RS12470;product=YeiH family protein;protein_id=WP_032237047.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 4341 5198 . + . ID=gene-AC57_RS12465;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AC57_RS12465;old_locus_tag=AC57_2387 NZ_JJLR01000088.1 Protein Homology CDS 4341 5198 . + 0 ID=cds-WP_000873890.1;Parent=gene-AC57_RS12465;Dbxref=GenBank:WP_000873890.1;Name=WP_000873890.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AC57_RS12465;product=deoxyribonuclease IV;protein_id=WP_000873890.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 5201 6289 . + . ID=gene-AC57_RS12460;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AC57_RS12460;old_locus_tag=AC57_2388 NZ_JJLR01000088.1 Protein Homology CDS 5201 6289 . + 0 ID=cds-WP_001064976.1;Parent=gene-AC57_RS12460;Dbxref=GenBank:WP_001064976.1;Name=WP_001064976.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708057.1;locus_tag=AC57_RS12460;product=sugar kinase;protein_id=WP_001064976.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 6396 7646 . - . ID=gene-AC57_RS12455;Name=AC57_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12455;old_locus_tag=AC57_2389 NZ_JJLR01000088.1 Protein Homology CDS 6396 7646 . - 0 ID=cds-WP_000382966.1;Parent=gene-AC57_RS12455;Dbxref=GenBank:WP_000382966.1;Name=WP_000382966.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AC57_RS12455;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000382966.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 7746 8687 . - . ID=gene-AC57_RS12450;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AC57_RS12450;old_locus_tag=AC57_2390 NZ_JJLR01000088.1 Protein Homology CDS 7746 8687 . - 0 ID=cds-WP_000415429.1;Parent=gene-AC57_RS12450;Dbxref=GenBank:WP_000415429.1;Name=WP_000415429.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AC57_RS12450;product=ribosylpyrimidine nucleosidase;protein_id=WP_000415429.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 8817 9515 . + . ID=gene-AC57_RS12445;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AC57_RS12445;old_locus_tag=AC57_2391 NZ_JJLR01000088.1 Protein Homology CDS 8817 9515 . + 0 ID=cds-WP_000658575.1;Parent=gene-AC57_RS12445;Dbxref=GenBank:WP_000658575.1;Name=WP_000658575.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AC57_RS12445;product=transcriptional regulator YeiL;protein_id=WP_000658575.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 9586 10836 . - . ID=gene-AC57_RS12440;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=AC57_RS12440;old_locus_tag=AC57_2392 NZ_JJLR01000088.1 Protein Homology CDS 9586 10836 . - 0 ID=cds-WP_000353878.1;Parent=gene-AC57_RS12440;Dbxref=GenBank:WP_000353878.1;Name=WP_000353878.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=psuT;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AC57_RS12440;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353878.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 10930 11868 . - . ID=gene-AC57_RS12435;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AC57_RS12435;old_locus_tag=AC57_2393 NZ_JJLR01000088.1 Protein Homology CDS 10930 11868 . - 0 ID=cds-WP_001292454.1;Parent=gene-AC57_RS12435;Dbxref=GenBank:WP_001292454.1;Name=WP_001292454.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311084.1;locus_tag=AC57_RS12435;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292454.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 11856 12797 . - . ID=gene-AC57_RS12430;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AC57_RS12430;old_locus_tag=AC57_2394 NZ_JJLR01000088.1 Protein Homology CDS 11856 12797 . - 0 ID=cds-WP_032279477.1;Parent=gene-AC57_RS12430;Dbxref=GenBank:WP_032279477.1;Name=WP_032279477.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416671.1;locus_tag=AC57_RS12430;product=pseudouridine kinase;protein_id=WP_032279477.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 13221 14912 . - . ID=gene-AC57_RS12425;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AC57_RS12425;old_locus_tag=AC57_2395 NZ_JJLR01000088.1 Protein Homology CDS 13221 14912 . - 0 ID=cds-WP_000854446.1;Parent=gene-AC57_RS12425;Dbxref=GenBank:WP_000854446.1;Name=WP_000854446.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416672.1;locus_tag=AC57_RS12425;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854446.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 14929 15867 . - . ID=gene-AC57_RS12420;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AC57_RS12420;old_locus_tag=AC57_2396 NZ_JJLR01000088.1 Protein Homology CDS 14929 15867 . - 0 ID=cds-WP_000091263.1;Parent=gene-AC57_RS12420;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AC57_RS12420;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 15867 16997 . - . ID=gene-AC57_RS12415;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AC57_RS12415;old_locus_tag=AC57_2397 NZ_JJLR01000088.1 Protein Homology CDS 15867 16997 . - 0 ID=cds-WP_000487246.1;Parent=gene-AC57_RS12415;Dbxref=GenBank:WP_000487246.1;Name=WP_000487246.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AC57_RS12415;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487246.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 17365 18546 . + . ID=gene-AC57_RS12410;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=AC57_RS12410;old_locus_tag=AC57_2399 NZ_JJLR01000088.1 Protein Homology CDS 17365 18546 . + 0 ID=cds-WP_000551969.1;Parent=gene-AC57_RS12410;Dbxref=GenBank:WP_000551969.1;Name=WP_000551969.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416675.1;locus_tag=AC57_RS12410;product=sugar efflux transporter SetB;protein_id=WP_000551969.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 18543 18797 . - . ID=gene-AC57_RS0124495;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AC57_RS0124495;old_locus_tag=AC57_2400 NZ_JJLR01000088.1 Protein Homology CDS 18543 18797 . - 0 ID=cds-WP_000389030.1;Parent=gene-AC57_RS0124495;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0051536;gbkey=CDS;gene=yeiW;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AC57_RS0124495;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 18952 19524 . + . ID=gene-AC57_RS12405;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AC57_RS12405;old_locus_tag=AC57_2402 NZ_JJLR01000088.1 Protein Homology CDS 18952 19524 . + 0 ID=cds-WP_001136827.1;Parent=gene-AC57_RS12405;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AC57_RS12405;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 19747 21213 . + . ID=gene-AC57_RS12400;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AC57_RS12400;old_locus_tag=AC57_2403 NZ_JJLR01000088.1 Protein Homology CDS 19747 21213 . + 0 ID=cds-WP_001091940.1;Parent=gene-AC57_RS12400;Dbxref=GenBank:WP_001091940.1;Name=WP_001091940.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AC57_RS12400;product=mannitol dehydrogenase family protein;protein_id=WP_001091940.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 21331 22317 . + . ID=gene-AC57_RS12395;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AC57_RS12395;old_locus_tag=AC57_2404 NZ_JJLR01000088.1 Protein Homology CDS 21331 22317 . + 0 ID=cds-WP_000198828.1;Parent=gene-AC57_RS12395;Dbxref=GenBank:WP_000198828.1;Name=WP_000198828.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416678.1;locus_tag=AC57_RS12395;product=zinc-binding GTPase YeiR;protein_id=WP_000198828.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 22356 23069 . + . ID=gene-AC57_RS12390;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AC57_RS12390;old_locus_tag=AC57_2405 NZ_JJLR01000088.1 Protein Homology CDS 22356 23069 . + 0 ID=cds-WP_000594599.1;Parent=gene-AC57_RS12390;Dbxref=GenBank:WP_000594599.1;Name=WP_000594599.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AC57_RS12390;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_000594599.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 23481 24047 . + . ID=gene-AC57_RS12385;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AC57_RS12385;old_locus_tag=AC57_2406 NZ_JJLR01000088.1 Protein Homology CDS 23481 24047 . + 0 ID=cds-WP_000241011.1;Parent=gene-AC57_RS12385;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AC57_RS12385;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 24228 25784 . + . ID=gene-AC57_RS12380;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AC57_RS12380;old_locus_tag=AC57_2407 NZ_JJLR01000088.1 Protein Homology CDS 24228 25784 . + 0 ID=cds-WP_032237052.1;Parent=gene-AC57_RS12380;Dbxref=GenBank:WP_032237052.1;Name=WP_032237052.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AC57_RS12380;product=cyclic di-GMP phosphodiesterase;protein_id=WP_032237052.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 25866 27680 . + . ID=gene-AC57_RS12375;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AC57_RS12375;old_locus_tag=AC57_2408 NZ_JJLR01000088.1 Protein Homology CDS 25866 27680 . + 0 ID=cds-WP_000637046.1;Parent=gene-AC57_RS12375;Dbxref=GenBank:WP_000637046.1;Name=WP_000637046.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416682.4;locus_tag=AC57_RS12375;product=extracellular solute-binding protein;protein_id=WP_000637046.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 27681 28775 . + . ID=gene-AC57_RS12370;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AC57_RS12370;old_locus_tag=AC57_2409 NZ_JJLR01000088.1 Protein Homology CDS 27681 28775 . + 0 ID=cds-WP_000501604.1;Parent=gene-AC57_RS12370;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AC57_RS12370;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 28775 29800 . + . ID=gene-AC57_RS12365;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AC57_RS12365;old_locus_tag=AC57_2410 NZ_JJLR01000088.1 Protein Homology CDS 28775 29800 . + 0 ID=cds-WP_000088916.1;Parent=gene-AC57_RS12365;Dbxref=GenBank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AC57_RS12365;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 29802 31391 . + . ID=gene-AC57_RS12360;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AC57_RS12360;old_locus_tag=AC57_2411 NZ_JJLR01000088.1 Protein Homology CDS 29802 31391 . + 0 ID=cds-WP_000194898.1;Parent=gene-AC57_RS12360;Dbxref=GenBank:WP_000194898.1;Name=WP_000194898.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416685.1;locus_tag=AC57_RS12360;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_000194898.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 31395 31739 . - . ID=gene-AC57_RS12355;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AC57_RS12355;old_locus_tag=AC57_2412 NZ_JJLR01000088.1 Protein Homology CDS 31395 31739 . - 0 ID=cds-WP_000202798.1;Parent=gene-AC57_RS12355;Dbxref=GenBank:WP_000202798.1;Name=WP_000202798.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AC57_RS12355;product=YejG family protein;protein_id=WP_000202798.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 32072 33262 . - . ID=gene-AC57_RS12350;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AC57_RS12350;old_locus_tag=AC57_2413 NZ_JJLR01000088.1 Protein Homology CDS 32072 33262 . - 0 ID=cds-WP_000213361.1;Parent=gene-AC57_RS12350;Dbxref=GenBank:WP_000213361.1;Name=WP_000213361.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416687.1;locus_tag=AC57_RS12350;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213361.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 33290 33985 . - . ID=gene-AC57_RS12345;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AC57_RS12345;old_locus_tag=AC57_2414 NZ_JJLR01000088.1 Protein Homology CDS 33290 33985 . - 0 ID=cds-WP_001234850.1;Parent=gene-AC57_RS12345;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AC57_RS12345;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 34134 35894 . + . ID=gene-AC57_RS12340;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AC57_RS12340;old_locus_tag=AC57_2415 NZ_JJLR01000088.1 Protein Homology CDS 34134 35894 . + 0 ID=cds-WP_000578061.1;Parent=gene-AC57_RS12340;Dbxref=GenBank:WP_000578061.1;Name=WP_000578061.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416689.1;locus_tag=AC57_RS12340;product=DEAD/DEAH box helicase;protein_id=WP_000578061.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 36019 36303 . + . ID=gene-AC57_RS12335;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AC57_RS12335;old_locus_tag=AC57_2416 NZ_JJLR01000088.1 Protein Homology CDS 36019 36303 . + 0 ID=cds-WP_000494183.1;Parent=gene-AC57_RS12335;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AC57_RS12335;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 36442 37449 . - . ID=gene-AC57_RS12330;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AC57_RS12330;old_locus_tag=AC57_2417 NZ_JJLR01000088.1 Protein Homology CDS 36442 37449 . - 0 ID=cds-WP_000050793.1;Parent=gene-AC57_RS12330;Dbxref=GenBank:WP_000050793.1;Name=WP_000050793.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416691.1;locus_tag=AC57_RS12330;product=nucleoid-associated protein YejK;protein_id=WP_000050793.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 37631 37858 . + . ID=gene-AC57_RS12325;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AC57_RS12325;old_locus_tag=AC57_2419 NZ_JJLR01000088.1 Protein Homology CDS 37631 37858 . + 0 ID=cds-WP_001135667.1;Parent=gene-AC57_RS12325;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AC57_RS12325;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 37878 39638 . + . ID=gene-AC57_RS12320;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AC57_RS12320;old_locus_tag=AC57_2420 NZ_JJLR01000088.1 Protein Homology CDS 37878 39638 . + 0 ID=cds-WP_032237055.1;Parent=gene-AC57_RS12320;Dbxref=GenBank:WP_032237055.1;Name=WP_032237055.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AC57_RS12320;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_032237055.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 39713 39789 . + . ID=gene-AC57_RS12315;Name=AC57_RS12315;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS12315;old_locus_tag=AC57_2421 NZ_JJLR01000088.1 tRNAscan-SE tRNA 39713 39789 . + . ID=rna-AC57_RS12315;Parent=gene-AC57_RS12315;anticodon=(pos:39747..39749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS12315;product=tRNA-Pro NZ_JJLR01000088.1 tRNAscan-SE exon 39713 39789 . + . ID=exon-AC57_RS12315-1;Parent=rna-AC57_RS12315;anticodon=(pos:39747..39749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS12315;product=tRNA-Pro NZ_JJLR01000088.1 RefSeq gene 39892 42483 . - . ID=gene-AC57_RS12310;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=protein_coding;locus_tag=AC57_RS12310;old_locus_tag=AC57_2422 NZ_JJLR01000088.1 Protein Homology CDS 39892 42483 . - 0 ID=cds-WP_050440080.1;Parent=gene-AC57_RS12310;Dbxref=GenBank:WP_050440080.1;Name=WP_050440080.1;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AC57_RS12310;product=autotransporter YejO;protein_id=WP_050440080.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 42803 43450 . + . ID=gene-AC57_RS12305;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AC57_RS12305;old_locus_tag=AC57_2423 NZ_JJLR01000088.1 Protein Homology CDS 42803 43450 . + 0 ID=cds-WP_001113637.1;Parent=gene-AC57_RS12305;Dbxref=GenBank:WP_001113637.1;Name=WP_001113637.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AC57_RS12305;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001113637.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 43661 44713 . - . ID=gene-AC57_RS12300;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AC57_RS12300;old_locus_tag=AC57_2424 NZ_JJLR01000088.1 Protein Homology CDS 43661 44713 . - 0 ID=cds-WP_001211575.1;Parent=gene-AC57_RS12300;Dbxref=GenBank:WP_001211575.1;Name=WP_001211575.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AC57_RS12300;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211575.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 44710 45267 . - . ID=gene-AC57_RS12295;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AC57_RS12295;old_locus_tag=AC57_2425 NZ_JJLR01000088.1 Protein Homology CDS 44710 45267 . - 0 ID=cds-WP_000824439.1;Parent=gene-AC57_RS12295;Dbxref=GenBank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AC57_RS12295;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 45264 47207 . - . ID=gene-AC57_RS12290;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AC57_RS12290;old_locus_tag=AC57_2426 NZ_JJLR01000088.1 Protein Homology CDS 45264 47207 . - 0 ID=cds-WP_000982447.1;Parent=gene-AC57_RS12290;Dbxref=GenBank:WP_000982447.1;Name=WP_000982447.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416700.1;locus_tag=AC57_RS12290;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_000982447.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 47204 47683 . - . ID=gene-AC57_RS12285;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AC57_RS12285;old_locus_tag=AC57_2427 NZ_JJLR01000088.1 Protein Homology CDS 47204 47683 . - 0 ID=cds-WP_001026418.1;Parent=gene-AC57_RS12285;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AC57_RS12285;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 47680 47889 . - . ID=gene-AC57_RS12280;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AC57_RS12280;old_locus_tag=AC57_2428 NZ_JJLR01000088.1 Protein Homology CDS 47680 47889 . - 0 ID=cds-WP_032237057.1;Parent=gene-AC57_RS12280;Dbxref=GenBank:WP_032237057.1;Name=WP_032237057.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AC57_RS12280;product=heme exporter protein CcmD;protein_id=WP_032237057.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 47886 48623 . - . ID=gene-AC57_RS12275;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AC57_RS12275;old_locus_tag=AC57_2429 NZ_JJLR01000088.1 Protein Homology CDS 47886 48623 . - 0 ID=cds-WP_001295447.1;Parent=gene-AC57_RS12275;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AC57_RS12275;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 48665 49327 . - . ID=gene-AC57_RS12270;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AC57_RS12270;old_locus_tag=AC57_2430 NZ_JJLR01000088.1 Protein Homology CDS 48665 49327 . - 0 ID=cds-WP_000971730.1;Parent=gene-AC57_RS12270;Dbxref=GenBank:WP_000971730.1;Name=WP_000971730.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AC57_RS12270;product=heme exporter protein CcmB;protein_id=WP_000971730.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 49324 49947 . - . ID=gene-AC57_RS12265;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AC57_RS12265;old_locus_tag=AC57_2431 NZ_JJLR01000088.1 Protein Homology CDS 49324 49947 . - 0 ID=cds-WP_077746209.1;Parent=gene-AC57_RS12265;Dbxref=GenBank:WP_077746209.1;Name=WP_077746209.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AC57_RS12265;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_077746209.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 49960 50562 . - . ID=gene-AC57_RS12260;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AC57_RS12260;old_locus_tag=AC57_2432 NZ_JJLR01000088.1 Protein Homology CDS 49960 50562 . - 0 ID=cds-WP_000528376.1;Parent=gene-AC57_RS12260;Dbxref=GenBank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AC57_RS12260;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 50572 51021 . - . ID=gene-AC57_RS12255;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AC57_RS12255;old_locus_tag=AC57_2433 NZ_JJLR01000088.1 Protein Homology CDS 50572 51021 . - 0 ID=cds-WP_000835174.1;Parent=gene-AC57_RS12255;Dbxref=GenBank:WP_000835174.1;Name=WP_000835174.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AC57_RS12255;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835174.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 51018 51881 . - . ID=gene-AC57_RS12250;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AC57_RS12250;old_locus_tag=AC57_2434 NZ_JJLR01000088.1 Protein Homology CDS 51018 51881 . - 0 ID=cds-WP_000013515.1;Parent=gene-AC57_RS12250;Dbxref=GenBank:WP_000013515.1;Name=WP_000013515.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416708.1;locus_tag=AC57_RS12250;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013515.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 51868 52563 . - . ID=gene-AC57_RS12245;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AC57_RS12245;old_locus_tag=AC57_2435 NZ_JJLR01000088.1 Protein Homology CDS 51868 52563 . - 0 ID=cds-WP_000091291.1;Parent=gene-AC57_RS12245;Dbxref=GenBank:WP_000091291.1;Name=WP_000091291.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AC57_RS12245;product=ferredoxin-type protein NapG;protein_id=WP_000091291.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 52570 55056 . - . ID=gene-AC57_RS12240;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AC57_RS12240;old_locus_tag=AC57_2436 NZ_JJLR01000088.1 Protein Homology CDS 52570 55056 . - 0 ID=cds-WP_000778061.1;Parent=gene-AC57_RS12240;Dbxref=GenBank:WP_000778061.1;Name=WP_000778061.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416710.1;locus_tag=AC57_RS12240;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_000778061.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 55053 55316 . - . ID=gene-AC57_RS12235;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AC57_RS12235;old_locus_tag=AC57_2437 NZ_JJLR01000088.1 Protein Homology CDS 55053 55316 . - 0 ID=cds-WP_000557378.1;Parent=gene-AC57_RS12235;Dbxref=GenBank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AC57_RS12235;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 55306 55800 . - . ID=gene-AC57_RS12230;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AC57_RS12230;old_locus_tag=AC57_2438 NZ_JJLR01000088.1 Protein Homology CDS 55306 55800 . - 0 ID=cds-WP_000686723.1;Parent=gene-AC57_RS12230;Dbxref=GenBank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AC57_RS12230;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 55909 56073 . + . ID=gene-AC57_RS30285;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=AC57_RS30285;old_locus_tag=AC57_2439 NZ_JJLR01000088.1 Protein Homology CDS 55909 56073 . + 0 ID=cds-WP_001310984.1;Parent=gene-AC57_RS30285;Dbxref=GenBank:WP_001310984.1;Name=WP_001310984.1;gbkey=CDS;gene=yojO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AC57_RS30285;product=protein YojO;protein_id=WP_001310984.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 56187 56696 . + . ID=gene-AC57_RS12220;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AC57_RS12220;old_locus_tag=AC57_2440 NZ_JJLR01000088.1 Protein Homology CDS 56187 56696 . + 0 ID=cds-WP_000712249.1;Parent=gene-AC57_RS12220;Dbxref=GenBank:WP_000712249.1;Name=WP_000712249.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785302.1;locus_tag=AC57_RS12220;product=serine protease inhibitor ecotin;protein_id=WP_000712249.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 57071 58717 . - . ID=gene-AC57_RS12215;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AC57_RS12215;old_locus_tag=AC57_2441 NZ_JJLR01000088.1 Protein Homology CDS 57071 58717 . - 0 ID=cds-WP_000758073.1;Parent=gene-AC57_RS12215;Dbxref=GenBank:WP_000758073.1;Name=WP_000758073.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=AC57_RS12215;product=malate dehydrogenase (quinone);protein_id=WP_000758073.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 58935 60578 . - . ID=gene-AC57_RS12210;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AC57_RS12210;old_locus_tag=AC57_2442 NZ_JJLR01000088.1 Protein Homology CDS 58935 60578 . - 0 ID=cds-WP_000422182.1;Parent=gene-AC57_RS12210;Dbxref=GenBank:WP_000422182.1;Name=WP_000422182.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AC57_RS12210;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422182.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 60654 61304 . - . ID=gene-AC57_RS12205;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AC57_RS12205;old_locus_tag=AC57_2443 NZ_JJLR01000088.1 Protein Homology CDS 60654 61304 . - 0 ID=cds-WP_000884972.1;Parent=gene-AC57_RS12205;Dbxref=GenBank:WP_000884972.1;Name=WP_000884972.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=AC57_RS12205;product=DNA oxidative demethylase AlkB;protein_id=WP_000884972.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 61304 62368 . - . ID=gene-AC57_RS12200;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AC57_RS12200;old_locus_tag=AC57_2444 NZ_JJLR01000088.1 Protein Homology CDS 61304 62368 . - 0 ID=cds-WP_032237460.1;Parent=gene-AC57_RS12200;Dbxref=GenBank:WP_032237460.1;Name=WP_032237460.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416717.1;locus_tag=AC57_RS12200;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_032237460.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 62442 63497 . - . ID=gene-AC57_RS12195;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AC57_RS12195;old_locus_tag=AC57_2445 NZ_JJLR01000088.1 Protein Homology CDS 62442 63497 . - 0 ID=cds-WP_000406064.1;Parent=gene-AC57_RS12195;Dbxref=GenBank:WP_000406064.1;Name=WP_000406064.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=AC57_RS12195;product=FAD:protein FMN transferase ApbE;protein_id=WP_000406064.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 63609 64712 . - . ID=gene-AC57_RS12190;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AC57_RS12190;old_locus_tag=AC57_2446 NZ_JJLR01000088.1 Protein Homology CDS 63609 64712 . - 0 ID=cds-WP_000865568.1;Parent=gene-AC57_RS12190;Dbxref=GenBank:WP_000865568.1;Name=WP_000865568.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416719.1;locus_tag=AC57_RS12190;product=porin OmpC;protein_id=WP_000865568.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 65451 68123 . + . ID=gene-AC57_RS12185;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AC57_RS12185;old_locus_tag=AC57_2447 NZ_JJLR01000088.1 Protein Homology CDS 65451 68123 . + 0 ID=cds-WP_032279480.1;Parent=gene-AC57_RS12185;Dbxref=GenBank:WP_032279480.1;Name=WP_032279480.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416720.1;locus_tag=AC57_RS12185;product=phosphotransferase RcsD;protein_id=WP_032279480.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 68140 68790 . + . ID=gene-AC57_RS12180;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AC57_RS12180;old_locus_tag=AC57_2448 NZ_JJLR01000088.1 Protein Homology CDS 68140 68790 . + 0 ID=cds-WP_001061917.1;Parent=gene-AC57_RS12180;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AC57_RS12180;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 68990 71839 . - . ID=gene-AC57_RS12175;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AC57_RS12175;old_locus_tag=AC57_2449 NZ_JJLR01000088.1 Protein Homology CDS 68990 71839 . - 0 ID=cds-WP_000876011.1;Parent=gene-AC57_RS12175;Dbxref=GenBank:WP_000876011.1;Name=WP_000876011.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AC57_RS12175;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876011.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 72006 73832 . + . ID=gene-AC57_RS12170;Name=atoS;gbkey=Gene;gene=atoS;gene_biotype=protein_coding;locus_tag=AC57_RS12170;old_locus_tag=AC57_2450 NZ_JJLR01000088.1 Protein Homology CDS 72006 73832 . + 0 ID=cds-WP_032237458.1;Parent=gene-AC57_RS12170;Dbxref=GenBank:WP_032237458.1;Name=WP_032237458.1;gbkey=CDS;gene=atoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416723.1;locus_tag=AC57_RS12170;product=two-component system sensor histidine kinase AtoS;protein_id=WP_032237458.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 73829 75214 . + . ID=gene-AC57_RS12165;Name=atoC;gbkey=Gene;gene=atoC;gene_biotype=protein_coding;locus_tag=AC57_RS12165;old_locus_tag=AC57_2451 NZ_JJLR01000088.1 Protein Homology CDS 73829 75214 . + 0 ID=cds-WP_032246285.1;Parent=gene-AC57_RS12165;Dbxref=GenBank:WP_032246285.1;Name=WP_032246285.1;gbkey=CDS;gene=atoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416724.1;locus_tag=AC57_RS12165;product=acetoacetate metabolism transcriptional regulator AtoC;protein_id=WP_032246285.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 75410 76072 . + . ID=gene-AC57_RS12160;Name=atoD;gbkey=Gene;gene=atoD;gene_biotype=protein_coding;locus_tag=AC57_RS12160;old_locus_tag=AC57_2452 NZ_JJLR01000088.1 Protein Homology CDS 75410 76072 . + 0 ID=cds-WP_000850540.1;Parent=gene-AC57_RS12160;Dbxref=GenBank:WP_000850540.1;Name=WP_000850540.1;gbkey=CDS;gene=atoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416725.1;locus_tag=AC57_RS12160;product=acetate CoA-transferase subunit alpha;protein_id=WP_000850540.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 76072 76722 . + . ID=gene-AC57_RS12155;Name=atoA;gbkey=Gene;gene=atoA;gene_biotype=protein_coding;locus_tag=AC57_RS12155;old_locus_tag=AC57_2453 NZ_JJLR01000088.1 Protein Homology CDS 76072 76722 . + 0 ID=cds-WP_000339065.1;Parent=gene-AC57_RS12155;Dbxref=GenBank:WP_000339065.1;Name=WP_000339065.1;gbkey=CDS;gene=atoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416726.1;locus_tag=AC57_RS12155;product=acetate CoA-transferase subunit beta;protein_id=WP_000339065.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 76719 78041 . + . ID=gene-AC57_RS12150;Name=atoE;gbkey=Gene;gene=atoE;gene_biotype=protein_coding;locus_tag=AC57_RS12150;old_locus_tag=AC57_2454 NZ_JJLR01000088.1 Protein Homology CDS 76719 78041 . + 0 ID=cds-WP_000580275.1;Parent=gene-AC57_RS12150;Dbxref=GenBank:WP_000580275.1;Name=WP_000580275.1;gbkey=CDS;gene=atoE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416727.1;locus_tag=AC57_RS12150;product=TIGR00366 family protein;protein_id=WP_000580275.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 78072 79256 . + . ID=gene-AC57_RS12145;Name=atoB;gbkey=Gene;gene=atoB;gene_biotype=protein_coding;locus_tag=AC57_RS12145;old_locus_tag=AC57_2455 NZ_JJLR01000088.1 Protein Homology CDS 78072 79256 . + 0 ID=cds-WP_000786544.1;Parent=gene-AC57_RS12145;Dbxref=GenBank:WP_000786544.1;Name=WP_000786544.1;gbkey=CDS;gene=atoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416728.1;locus_tag=AC57_RS12145;product=acetyl-CoA acetyltransferase;protein_id=WP_000786544.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 79330 80106 . - . ID=gene-AC57_RS12140;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AC57_RS12140;old_locus_tag=AC57_2456 NZ_JJLR01000088.1 Protein Homology CDS 79330 80106 . - 0 ID=cds-WP_032237456.1;Parent=gene-AC57_RS12140;Dbxref=GenBank:WP_032237456.1;Name=WP_032237456.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416729.1;locus_tag=AC57_RS12140;product=YfaP family protein;protein_id=WP_032237456.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 80111 81760 . - . ID=gene-AC57_RS12135;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=AC57_RS12135;old_locus_tag=AC57_2457 NZ_JJLR01000088.1 Protein Homology CDS 80111 81760 . - 0 ID=cds-WP_001104549.1;Parent=gene-AC57_RS12135;Dbxref=GenBank:WP_001104549.1;Name=WP_001104549.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AC57_RS12135;product=YfaQ family protein;protein_id=WP_001104549.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 81761 86275 . - . ID=gene-AC57_RS12130;Name=AC57_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12130;old_locus_tag=AC57_2458 NZ_JJLR01000088.1 Protein Homology CDS 81761 86275 . - 0 ID=cds-WP_032279482.1;Parent=gene-AC57_RS12130;Dbxref=GenBank:WP_032279482.1;Name=WP_032279482.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=AC57_RS12130;product=alpha-2-macroglobulin family protein;protein_id=WP_032279482.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 86299 86922 . - . ID=gene-AC57_RS12125;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=protein_coding;locus_tag=AC57_RS12125;old_locus_tag=AC57_2459 NZ_JJLR01000088.1 Protein Homology CDS 86299 86922 . - 0 ID=cds-WP_001295211.1;Parent=gene-AC57_RS12125;Dbxref=GenBank:WP_001295211.1;Name=WP_001295211.1;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AC57_RS12125;product=DUF1175 domain-containing protein;protein_id=WP_001295211.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 86919 88607 . - . ID=gene-AC57_RS12120;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AC57_RS12120;old_locus_tag=AC57_2460 NZ_JJLR01000088.1 Protein Homology CDS 86919 88607 . - 0 ID=cds-WP_000012305.1;Parent=gene-AC57_RS12120;Dbxref=GenBank:WP_000012305.1;Name=WP_000012305.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AC57_RS12120;product=DUF2138 domain-containing protein;protein_id=WP_000012305.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 88756 91383 . - . ID=gene-AC57_RS12115;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AC57_RS12115;old_locus_tag=AC57_2461 NZ_JJLR01000088.1 Protein Homology CDS 88756 91383 . - 0 ID=cds-WP_001281242.1;Parent=gene-AC57_RS12115;Dbxref=GenBank:WP_001281242.1;Name=WP_001281242.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416734.1;locus_tag=AC57_RS12115;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281242.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 91530 92252 . + . ID=gene-AC57_RS12110;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AC57_RS12110;old_locus_tag=AC57_2462 NZ_JJLR01000088.1 Protein Homology CDS 91530 92252 . + 0 ID=cds-WP_000990765.1;Parent=gene-AC57_RS12110;Dbxref=GenBank:WP_000990765.1;Name=WP_000990765.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AC57_RS12110;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990765.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 92380 96132 . - . ID=gene-AC57_RS12105;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=protein_coding;locus_tag=AC57_RS12105;old_locus_tag=AC57_2463 NZ_JJLR01000088.1 Protein Homology CDS 92380 96132 . - 0 ID=cds-WP_032237453.1;Parent=gene-AC57_RS12105;Dbxref=GenBank:WP_032237453.1;Name=WP_032237453.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416736.1;locus_tag=AC57_RS12105;product=AIDA-I family autotransporter adhesin YfaL/EhaC;protein_id=WP_032237453.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 96557 96700 . - . ID=gene-AC57_RS31025;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AC57_RS31025 NZ_JJLR01000088.1 Protein Homology CDS 96557 96700 . - 0 ID=cds-WP_001753443.1;Parent=gene-AC57_RS31025;Dbxref=GenBank:WP_001753443.1;Name=WP_001753443.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AC57_RS31025;product=protein YpaB;protein_id=WP_001753443.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 96828 99113 . + . ID=gene-AC57_RS12100;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AC57_RS12100;old_locus_tag=AC57_2464 NZ_JJLR01000088.1 Protein Homology CDS 96828 99113 . + 0 ID=cds-WP_001075164.1;Parent=gene-AC57_RS12100;Dbxref=GenBank:WP_001075164.1;Name=WP_001075164.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AC57_RS12100;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001075164.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 99347 100477 . + . ID=gene-AC57_RS12095;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AC57_RS12095;old_locus_tag=AC57_2465 NZ_JJLR01000088.1 Protein Homology CDS 99347 100477 . + 0 ID=cds-WP_000332037.1;Parent=gene-AC57_RS12095;Dbxref=GenBank:WP_000332037.1;Name=WP_000332037.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AC57_RS12095;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332037.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 100477 100731 . + . ID=gene-AC57_RS12090;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AC57_RS12090;old_locus_tag=AC57_2466 NZ_JJLR01000088.1 Protein Homology CDS 100477 100731 . + 0 ID=cds-WP_000135040.1;Parent=gene-AC57_RS12090;Dbxref=GenBank:WP_000135040.1;Name=WP_000135040.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416739.1;locus_tag=AC57_RS12090;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_000135040.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 100785 101435 . - . ID=gene-AC57_RS12085;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AC57_RS12085;old_locus_tag=AC57_2467 NZ_JJLR01000088.1 Protein Homology CDS 100785 101435 . - 0 ID=cds-WP_001405456.1;Parent=gene-AC57_RS12085;Dbxref=GenBank:WP_001405456.1;Name=WP_001405456.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416740.1;locus_tag=AC57_RS12085;product=lipopolysaccharide kinase InaA;protein_id=WP_001405456.1;transl_table=11 NZ_JJLR01000088.1 RefSeq pseudogene 101515 101619 . - . ID=gene-AC57_RS30770;Name=AC57_RS30770;end_range=101619,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30770;partial=true;pseudo=true NZ_JJLR01000088.1 Protein Homology CDS 101515 101619 . - 0 ID=cds-AC57_RS30770;Parent=gene-AC57_RS30770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=101619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AC57_RS30770;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000088.1 RefSeq pseudogene 101614 101856 . + . ID=gene-AC57_RS12080;Name=AC57_RS12080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS12080;old_locus_tag=AC57_2468;partial=true;pseudo=true;start_range=.,101614 NZ_JJLR01000088.1 Protein Homology CDS 101614 101856 . + 0 ID=cds-AC57_RS12080;Parent=gene-AC57_RS12080;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311149.1;locus_tag=AC57_RS12080;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,101614;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 101898 102974 . - . ID=gene-AC57_RS12075;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AC57_RS12075;old_locus_tag=AC57_2469 NZ_JJLR01000088.1 Protein Homology CDS 101898 102974 . - 0 ID=cds-WP_000779105.1;Parent=gene-AC57_RS12075;Dbxref=GenBank:WP_000779105.1;Name=WP_000779105.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416742.1;locus_tag=AC57_RS12075;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000779105.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 102979 104337 . - . ID=gene-AC57_RS12070;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AC57_RS12070;old_locus_tag=AC57_2470 NZ_JJLR01000088.1 Protein Homology CDS 102979 104337 . - 0 ID=cds-WP_000948732.1;Parent=gene-AC57_RS12070;Dbxref=GenBank:WP_000948732.1;Name=WP_000948732.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416743.1;locus_tag=AC57_RS12070;product=glycerol-3-phosphate transporter;protein_id=WP_000948732.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 104610 106238 . + . ID=gene-AC57_RS12065;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AC57_RS12065;old_locus_tag=AC57_2471 NZ_JJLR01000088.1 Protein Homology CDS 104610 106238 . + 0 ID=cds-WP_000857257.1;Parent=gene-AC57_RS12065;Dbxref=GenBank:WP_000857257.1;Name=WP_000857257.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AC57_RS12065;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_000857257.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 106228 107487 . + . ID=gene-AC57_RS12060;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AC57_RS12060;old_locus_tag=AC57_2472 NZ_JJLR01000088.1 Protein Homology CDS 106228 107487 . + 0 ID=cds-WP_001209902.1;Parent=gene-AC57_RS12060;Dbxref=GenBank:WP_001209902.1;Name=WP_001209902.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708132.2;locus_tag=AC57_RS12060;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_001209902.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 107484 108674 . + . ID=gene-AC57_RS12055;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AC57_RS12055;old_locus_tag=AC57_2473 NZ_JJLR01000088.1 Protein Homology CDS 107484 108674 . + 0 ID=cds-WP_001000359.1;Parent=gene-AC57_RS12055;Dbxref=GenBank:WP_001000359.1;Name=WP_001000359.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AC57_RS12055;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000359.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 108867 109766 . + . ID=gene-AC57_RS12050;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AC57_RS12050;old_locus_tag=AC57_2475 NZ_JJLR01000088.1 Protein Homology CDS 108867 109766 . + 0 ID=cds-WP_000140569.1;Parent=gene-AC57_RS12050;Dbxref=GenBank:WP_000140569.1;Name=WP_000140569.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416747.1;locus_tag=AC57_RS12050;product=ISNCY family transposase;protein_id=WP_000140569.1;transl_table=11 NZ_JJLR01000088.1 RefSeq pseudogene 109767 109964 . + . ID=gene-AC57_RS12045;Name=AC57_RS12045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS12045;old_locus_tag=AC57_2476;partial=true;pseudo=true;start_range=.,109767 NZ_JJLR01000088.1 Protein Homology CDS 109767 109964 . + 0 ID=cds-AC57_RS12045;Parent=gene-AC57_RS12045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416747.1;locus_tag=AC57_RS12045;partial=true;product=hypothetical protein;pseudo=true;start_range=.,109767;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 110005 110808 . - . ID=gene-AC57_RS12040;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=AC57_RS12040;old_locus_tag=AC57_2477 NZ_JJLR01000088.1 Protein Homology CDS 110005 110808 . - 0 ID=cds-WP_000992954.1;Parent=gene-AC57_RS12040;Dbxref=GenBank:WP_000992954.1;Name=WP_000992954.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AC57_RS12040;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992954.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 110826 112115 . - . ID=gene-AC57_RS12035;Name=yfaV;gbkey=Gene;gene=yfaV;gene_biotype=protein_coding;locus_tag=AC57_RS12035;old_locus_tag=AC57_2478 NZ_JJLR01000088.1 Protein Homology CDS 110826 112115 . - 0 ID=cds-WP_001295288.1;Parent=gene-AC57_RS12035;Dbxref=GenBank:WP_001295288.1;Name=WP_001295288.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfaV;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416749.4;locus_tag=AC57_RS12035;product=MFS transporter;protein_id=WP_001295288.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 112172 113377 . - . ID=gene-AC57_RS12030;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=AC57_RS12030;old_locus_tag=AC57_2479 NZ_JJLR01000088.1 Protein Homology CDS 112172 113377 . - 0 ID=cds-WP_001319848.1;Parent=gene-AC57_RS12030;Dbxref=GenBank:WP_001319848.1;Name=WP_001319848.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416750.2;locus_tag=AC57_RS12030;product=L-rhamnonate dehydratase;protein_id=WP_001319848.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 113392 114174 . - . ID=gene-AC57_RS12025;Name=yfaX;gbkey=Gene;gene=yfaX;gene_biotype=protein_coding;locus_tag=AC57_RS12025;old_locus_tag=AC57_2480 NZ_JJLR01000088.1 Protein Homology CDS 113392 114174 . - 0 ID=cds-WP_000894185.1;Parent=gene-AC57_RS12025;Dbxref=GenBank:WP_000894185.1;Name=WP_000894185.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfaX;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416751.1;locus_tag=AC57_RS12025;product=IclR family transcriptional regulator;protein_id=WP_000894185.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 114394 115596 . - . ID=gene-AC57_RS12020;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AC57_RS12020;old_locus_tag=AC57_2481 NZ_JJLR01000088.1 Protein Homology CDS 114394 115596 . - 0 ID=cds-WP_000921633.1;Parent=gene-AC57_RS12020;Dbxref=GenBank:WP_000921633.1;Name=WP_000921633.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AC57_RS12020;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_000921633.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 115696 116238 . - . ID=gene-AC57_RS12015;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=AC57_RS12015;old_locus_tag=AC57_2482 NZ_JJLR01000088.1 Protein Homology CDS 115696 116238 . - 0 ID=cds-WP_001300392.1;Parent=gene-AC57_RS12015;Dbxref=GenBank:WP_001300392.1;Name=WP_001300392.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416753.4;locus_tag=AC57_RS12015;product=YfaZ family protein;protein_id=WP_001300392.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 116518 116943 . + . ID=gene-AC57_RS12010;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AC57_RS12010;old_locus_tag=AC57_2483 NZ_JJLR01000088.1 Protein Homology CDS 116518 116943 . + 0 ID=cds-WP_001300564.1;Parent=gene-AC57_RS12010;Dbxref=GenBank:WP_001300564.1;Name=WP_001300564.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416754.1;locus_tag=AC57_RS12010;product=nucleoside triphosphatase NudI;protein_id=WP_001300564.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 116982 117542 . - . ID=gene-AC57_RS12005;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AC57_RS12005;old_locus_tag=AC57_2484 NZ_JJLR01000088.1 Protein Homology CDS 116982 117542 . - 0 ID=cds-WP_248785405.1;Parent=gene-AC57_RS12005;Dbxref=GenBank:WP_248785405.1;Name=WP_248785405.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020236739.1;locus_tag=AC57_RS12005;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_248785405.1;transl_table=11 NZ_JJLR01000088.1 RefSeq gene 117584 117761 . + . ID=gene-AC57_RS27405;Name=AC57_RS27405;end_range=117761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27405;old_locus_tag=AC57_2485;partial=true NZ_JJLR01000088.1 Protein Homology CDS 117584 117761 . + 0 ID=cds-WP_000179193.1;Parent=gene-AC57_RS27405;Dbxref=GenBank:WP_000179193.1;Name=WP_000179193.1;Ontology_term=GO:0006313;end_range=117761,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27405;partial=true;product=IS1 family transposase;protein_id=WP_000179193.1;transl_table=11 ##sequence-region NZ_JJLR01000089.1 1 1758 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000089.1 RefSeq region 1 1758 . + . ID=NZ_JJLR01000089.1:1..1758;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000089.1 RefSeq gene 1 277 . + . ID=gene-AC57_RS12000;Name=AC57_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS12000;old_locus_tag=AC57_2486;partial=true;start_range=.,1 NZ_JJLR01000089.1 Protein Homology CDS 1 277 . + 1 ID=cds-WP_000364013.1-2;Parent=gene-AC57_RS12000;Dbxref=GenBank:WP_000364013.1;Name=WP_000364013.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS12000;partial=true;product=IS1 family transposase;protein_id=WP_000364013.1;start_range=.,1;transl_table=11 NZ_JJLR01000089.1 RefSeq pseudogene 294 413 . - . ID=gene-AC57_RS30775;Name=AC57_RS30775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30775;partial=true;pseudo=true;start_range=.,294 NZ_JJLR01000089.1 Protein Homology CDS 294 413 . - 0 ID=cds-AC57_RS30775;Parent=gene-AC57_RS30775;Note=catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000055794.1;locus_tag=AC57_RS30775;partial=true;product=histidine phosphatase family protein;pseudo=true;start_range=.,294;transl_table=11 NZ_JJLR01000089.1 RefSeq pseudogene 664 1503 . + . ID=gene-AC57_RS11995;Name=AC57_RS11995;end_range=1503,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS11995;old_locus_tag=AC57_2487;partial=true;pseudo=true NZ_JJLR01000089.1 Protein Homology CDS 664 1503 . + 0 ID=cds-AC57_RS11995;Parent=gene-AC57_RS11995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009058,GO:0030170;end_range=1503,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AC57_RS11995;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 NZ_JJLR01000089.1 RefSeq gene 1520 1758 . - . ID=gene-AC57_RS11990;Name=AC57_RS11990;end_range=1758,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS11990;old_locus_tag=AC57_2488;partial=true NZ_JJLR01000089.1 Protein Homology CDS 1520 1758 . - 2 ID=cds-WP_001394976.1-2;Parent=gene-AC57_RS11990;Dbxref=GenBank:WP_001394976.1;Name=WP_001394976.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1758,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS11990;partial=true;product=IS1 family transposase;protein_id=WP_001394976.1;transl_table=11 ##sequence-region NZ_JJLR01000090.1 1 17071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000090.1 RefSeq region 1 17071 . + . ID=NZ_JJLR01000090.1:1..17071;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000090.1 RefSeq gene 1 218 . - . ID=gene-AC57_RS0124520;Name=AC57_RS0124520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124520;old_locus_tag=AC57_2489;partial=true;start_range=.,1 NZ_JJLR01000090.1 Protein Homology CDS 1 218 . - 0 ID=cds-WP_001395569.1-2;Parent=gene-AC57_RS0124520;Dbxref=GenBank:WP_001395569.1;Name=WP_001395569.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558261.1;locus_tag=AC57_RS0124520;partial=true;product=IS1 family transposase;protein_id=WP_001395569.1;start_range=.,1;transl_table=11 NZ_JJLR01000090.1 RefSeq pseudogene 266 580 . + . ID=gene-AC57_RS27410;Name=AC57_RS27410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27410;old_locus_tag=AC57_2490;partial=true;pseudo=true;start_range=.,266 NZ_JJLR01000090.1 Protein Homology CDS 266 580 . + 0 ID=cds-AC57_RS27410;Parent=gene-AC57_RS27410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AC57_RS27410;partial=true;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;start_range=.,266;transl_table=11 NZ_JJLR01000090.1 RefSeq pseudogene 584 1551 . + . ID=gene-AC57_RS0124530;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=pseudogene;locus_tag=AC57_RS0124530;pseudo=true NZ_JJLR01000090.1 Protein Homology CDS 584 1551 . + 0 ID=cds-AC57_RS0124530;Parent=gene-AC57_RS0124530;Note=frameshifted;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AC57_RS0124530;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;pseudo=true;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 1551 3533 . + . ID=gene-AC57_RS11985;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AC57_RS11985;old_locus_tag=AC57_2493 NZ_JJLR01000090.1 Protein Homology CDS 1551 3533 . + 0 ID=cds-WP_032280005.1;Parent=gene-AC57_RS11985;Dbxref=GenBank:WP_032280005.1;Name=WP_032280005.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416758.1;locus_tag=AC57_RS11985;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_032280005.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 3530 4420 . + . ID=gene-AC57_RS11980;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AC57_RS11980;old_locus_tag=AC57_2494 NZ_JJLR01000090.1 Protein Homology CDS 3530 4420 . + 0 ID=cds-WP_001739114.1;Parent=gene-AC57_RS11980;Dbxref=GenBank:WP_001739114.1;Name=WP_001739114.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416759.1;locus_tag=AC57_RS11980;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_001739114.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 4420 6072 . + . ID=gene-AC57_RS11975;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AC57_RS11975;old_locus_tag=AC57_2495 NZ_JJLR01000090.1 Protein Homology CDS 4420 6072 . + 0 ID=cds-WP_001400700.1;Parent=gene-AC57_RS11975;Dbxref=GenBank:WP_001400700.1;Name=WP_001400700.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416760.1;locus_tag=AC57_RS11975;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_001400700.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 6069 6404 . + . ID=gene-AC57_RS11970;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AC57_RS11970;old_locus_tag=AC57_2496 NZ_JJLR01000090.1 Protein Homology CDS 6069 6404 . + 0 ID=cds-WP_000638031.1;Parent=gene-AC57_RS11970;Dbxref=GenBank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AC57_RS11970;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 6404 6790 . + . ID=gene-AC57_RS11965;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AC57_RS11965;old_locus_tag=AC57_2497 NZ_JJLR01000090.1 Protein Homology CDS 6404 6790 . + 0 ID=cds-WP_000523880.1;Parent=gene-AC57_RS11965;Dbxref=GenBank:WP_000523880.1;Name=WP_000523880.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AC57_RS11965;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523880.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 6784 7050 . - . ID=gene-AC57_RS11960;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AC57_RS11960;old_locus_tag=AC57_2498 NZ_JJLR01000090.1 Protein Homology CDS 6784 7050 . - 0 ID=cds-WP_001295285.1;Parent=gene-AC57_RS11960;Dbxref=GenBank:WP_001295285.1;Name=WP_001295285.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AC57_RS11960;product=signal transduction protein PmrD;protein_id=WP_001295285.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 7160 8515 . - . ID=gene-AC57_RS11955;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AC57_RS11955;old_locus_tag=AC57_2499 NZ_JJLR01000090.1 Protein Homology CDS 7160 8515 . - 0 ID=cds-WP_000577625.1;Parent=gene-AC57_RS11955;Dbxref=GenBank:WP_000577625.1;Name=WP_000577625.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AC57_RS11955;product=o-succinylbenzoate--CoA ligase;protein_id=WP_000577625.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 8512 9474 . - . ID=gene-AC57_RS11950;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AC57_RS11950;old_locus_tag=AC57_2500 NZ_JJLR01000090.1 Protein Homology CDS 8512 9474 . - 0 ID=cds-WP_001515640.1;Parent=gene-AC57_RS11950;Dbxref=GenBank:WP_001515640.1;Name=WP_001515640.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311176.1;locus_tag=AC57_RS11950;product=o-succinylbenzoate synthase;protein_id=WP_001515640.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 9474 10331 . - . ID=gene-AC57_RS11945;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AC57_RS11945;old_locus_tag=AC57_2501 NZ_JJLR01000090.1 Protein Homology CDS 9474 10331 . - 0 ID=cds-WP_000639996.1;Parent=gene-AC57_RS11945;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AC57_RS11945;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 10346 11104 . - . ID=gene-AC57_RS11940;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AC57_RS11940;old_locus_tag=AC57_2502 NZ_JJLR01000090.1 Protein Homology CDS 10346 11104 . - 0 ID=cds-WP_000600499.1;Parent=gene-AC57_RS11940;Dbxref=GenBank:WP_000600499.1;Name=WP_000600499.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416766.1;locus_tag=AC57_RS11940;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600499.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 11101 12771 . - . ID=gene-AC57_RS11935;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AC57_RS11935;old_locus_tag=AC57_2503 NZ_JJLR01000090.1 Protein Homology CDS 11101 12771 . - 0 ID=cds-WP_001341573.1;Parent=gene-AC57_RS11935;Dbxref=GenBank:WP_001341573.1;Name=WP_001341573.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416767.1;locus_tag=AC57_RS11935;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001341573.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 12860 14155 . - . ID=gene-AC57_RS11930;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AC57_RS11930;old_locus_tag=AC57_2504 NZ_JJLR01000090.1 Protein Homology CDS 12860 14155 . - 0 ID=cds-WP_001564815.1;Parent=gene-AC57_RS11930;Dbxref=GenBank:WP_001564815.1;Name=WP_001564815.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311180.2;locus_tag=AC57_RS11930;product=isochorismate synthase MenF;protein_id=WP_001564815.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 14234 14539 . - . ID=gene-AC57_RS11925;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AC57_RS11925;old_locus_tag=AC57_2505 NZ_JJLR01000090.1 Protein Homology CDS 14234 14539 . - 0 ID=cds-WP_000070621.1;Parent=gene-AC57_RS11925;Dbxref=GenBank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AC57_RS11925;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 14594 15055 . - . ID=gene-AC57_RS11920;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AC57_RS11920;old_locus_tag=AC57_2506 NZ_JJLR01000090.1 Protein Homology CDS 14594 15055 . - 0 ID=cds-WP_000574088.1;Parent=gene-AC57_RS11920;Dbxref=GenBank:WP_000574088.1;Name=WP_000574088.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311182.1;locus_tag=AC57_RS11920;product=GNAT family N-acetyltransferase;protein_id=WP_000574088.1;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 15120 16037 . + . ID=gene-AC57_RS11915;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AC57_RS11915;old_locus_tag=AC57_2507 NZ_JJLR01000090.1 Protein Homology CDS 15120 16037 . + 0 ID=cds-WP_001329358.1;Parent=gene-AC57_RS11915;Dbxref=GenBank:WP_001329358.1;Name=WP_001329358.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311183.2;locus_tag=AC57_RS11915;product=ribonuclease BN;protein_id=WP_001329358.1;transl_table=11 NZ_JJLR01000090.1 RefSeq pseudogene 16225 16788 . + . ID=gene-AC57_RS11910;Name=AC57_RS11910;end_range=16788,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS11910;old_locus_tag=AC57_2509;partial=true;pseudo=true NZ_JJLR01000090.1 Protein Homology CDS 16225 16788 . + 0 ID=cds-AC57_RS11910;Parent=gene-AC57_RS11910;Note=ElaD%3B specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins%3B SseL in Salmonella is required for macrophage killing and virulence%2C and it is secreted by the salmonella pathogenicity island 2 type III secretion system%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=16788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AC57_RS11910;partial=true;product=deubiquitinase;pseudo=true;transl_table=11 NZ_JJLR01000090.1 RefSeq gene 16805 17071 . - . ID=gene-AC57_RS11905;Name=AC57_RS11905;end_range=17071,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS11905;old_locus_tag=AC57_2510;partial=true NZ_JJLR01000090.1 Protein Homology CDS 16805 17071 . - 0 ID=cds-WP_000641234.1;Parent=gene-AC57_RS11905;Dbxref=GenBank:WP_000641234.1;Name=WP_000641234.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=17071,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS11905;partial=true;product=IS1 family transposase;protein_id=WP_000641234.1;transl_table=11 ##sequence-region NZ_JJLR01000091.1 1 60470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000091.1 RefSeq region 1 60470 . + . ID=NZ_JJLR01000091.1:1..60470;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000091.1 RefSeq gene 1 249 . - . ID=gene-AC57_RS27415;Name=AC57_RS27415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27415;old_locus_tag=AC57_2511;partial=true;start_range=.,1 NZ_JJLR01000091.1 Protein Homology CDS 1 249 . - 0 ID=cds-WP_001395527.1;Parent=gene-AC57_RS27415;Dbxref=GenBank:WP_001395527.1;Name=WP_001395527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27415;partial=true;product=IS1-like element transposase;protein_id=WP_001395527.1;start_range=.,1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 417 920 . + . ID=gene-AC57_RS11900;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AC57_RS11900;old_locus_tag=AC57_2512 NZ_JJLR01000091.1 Protein Homology CDS 417 920 . + 0 ID=cds-WP_001752851.1;Parent=gene-AC57_RS11900;Dbxref=GenBank:WP_001752851.1;Name=WP_001752851.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311186.1;locus_tag=AC57_RS11900;product=YfbM family protein;protein_id=WP_001752851.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 987 2444 . - . ID=gene-AC57_RS11895;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AC57_RS11895;old_locus_tag=AC57_2513 NZ_JJLR01000091.1 Protein Homology CDS 987 2444 . - 0 ID=cds-WP_000156701.1;Parent=gene-AC57_RS11895;Dbxref=GenBank:WP_000156701.1;Name=WP_000156701.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AC57_RS11895;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156701.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 2451 3980 . - . ID=gene-AC57_RS11890;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AC57_RS11890;old_locus_tag=AC57_2514 NZ_JJLR01000091.1 Protein Homology CDS 2451 3980 . - 0 ID=cds-WP_000926441.1;Parent=gene-AC57_RS11890;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AC57_RS11890;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 4144 5985 . - . ID=gene-AC57_RS11885;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AC57_RS11885;old_locus_tag=AC57_2515 NZ_JJLR01000091.1 Protein Homology CDS 4144 5985 . - 0 ID=cds-WP_001056618.1;Parent=gene-AC57_RS11885;Dbxref=GenBank:WP_001056618.1;Name=WP_001056618.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AC57_RS11885;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_001056618.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 5982 6284 . - . ID=gene-AC57_RS11880;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AC57_RS11880;old_locus_tag=AC57_2516 NZ_JJLR01000091.1 Protein Homology CDS 5982 6284 . - 0 ID=cds-WP_000612644.1;Parent=gene-AC57_RS11880;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AC57_RS11880;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 6281 6835 . - . ID=gene-AC57_RS11875;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AC57_RS11875;old_locus_tag=AC57_2517 NZ_JJLR01000091.1 Protein Homology CDS 6281 6835 . - 0 ID=cds-WP_000393511.1;Parent=gene-AC57_RS11875;Dbxref=GenBank:WP_000393511.1;Name=WP_000393511.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=AC57_RS11875;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 6847 7389 . - . ID=gene-AC57_RS11870;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AC57_RS11870;old_locus_tag=AC57_2518 NZ_JJLR01000091.1 Protein Homology CDS 6847 7389 . - 0 ID=cds-WP_000172749.1;Parent=gene-AC57_RS11870;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AC57_RS11870;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 7404 8381 . - . ID=gene-AC57_RS11865;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AC57_RS11865;old_locus_tag=AC57_2519 NZ_JJLR01000091.1 Protein Homology CDS 7404 8381 . - 0 ID=cds-WP_000118507.1;Parent=gene-AC57_RS11865;Dbxref=GenBank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AC57_RS11865;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 8378 11104 . - . ID=gene-AC57_RS11860;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AC57_RS11860;old_locus_tag=AC57_2520 NZ_JJLR01000091.1 Protein Homology CDS 8378 11104 . - 0 ID=cds-WP_032279646.1;Parent=gene-AC57_RS11860;Dbxref=GenBank:WP_032279646.1;Name=WP_032279646.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416786.4;locus_tag=AC57_RS11860;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_032279646.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 11157 12494 . - . ID=gene-AC57_RS11855;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AC57_RS11855;old_locus_tag=AC57_2521 NZ_JJLR01000091.1 Protein Homology CDS 11157 12494 . - 0 ID=cds-WP_000789502.1;Parent=gene-AC57_RS11855;Dbxref=GenBank:WP_000789502.1;Name=WP_000789502.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=AC57_RS11855;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789502.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 12491 12991 . - . ID=gene-AC57_RS11850;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AC57_RS11850;old_locus_tag=AC57_2522 NZ_JJLR01000091.1 Protein Homology CDS 12491 12991 . - 0 ID=cds-WP_000545042.1;Parent=gene-AC57_RS11850;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AC57_RS11850;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 12994 14796 . - . ID=gene-AC57_RS11845;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AC57_RS11845;old_locus_tag=AC57_2523 NZ_JJLR01000091.1 Protein Homology CDS 12994 14796 . - 0 ID=cds-WP_000247878.1;Parent=gene-AC57_RS11845;Dbxref=GenBank:WP_000247878.1;Name=WP_000247878.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AC57_RS11845;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247878.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 14890 15552 . - . ID=gene-AC57_RS11840;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AC57_RS11840;old_locus_tag=AC57_2524 NZ_JJLR01000091.1 Protein Homology CDS 14890 15552 . - 0 ID=cds-WP_000386733.1;Parent=gene-AC57_RS11840;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AC57_RS11840;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 15568 16011 . - . ID=gene-AC57_RS11835;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AC57_RS11835;old_locus_tag=AC57_2525 NZ_JJLR01000091.1 Protein Homology CDS 15568 16011 . - 0 ID=cds-WP_000062997.1;Parent=gene-AC57_RS11835;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AC57_RS11835;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 16643 17581 . - . ID=gene-AC57_RS11830;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AC57_RS11830;old_locus_tag=AC57_2527 NZ_JJLR01000091.1 Protein Homology CDS 16643 17581 . - 0 ID=cds-WP_000622290.1;Parent=gene-AC57_RS11830;Dbxref=GenBank:WP_000622290.1;Name=WP_000622290.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=AC57_RS11830;product=transcriptional regulator LrhA;protein_id=WP_000622290.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 18501 19718 . + . ID=gene-AC57_RS11825;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AC57_RS11825;old_locus_tag=AC57_2528 NZ_JJLR01000091.1 Protein Homology CDS 18501 19718 . + 0 ID=cds-WP_000074527.1;Parent=gene-AC57_RS11825;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AC57_RS11825;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 19802 20401 . + . ID=gene-AC57_RS11820;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AC57_RS11820;old_locus_tag=AC57_2529 NZ_JJLR01000091.1 Protein Homology CDS 19802 20401 . + 0 ID=cds-WP_032237432.1;Parent=gene-AC57_RS11820;Dbxref=GenBank:WP_032237432.1;Name=WP_032237432.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416794.1;locus_tag=AC57_RS11820;product=5'-deoxynucleotidase;protein_id=WP_032237432.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 20460 22292 . - . ID=gene-AC57_RS11815;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AC57_RS11815;old_locus_tag=AC57_2530 NZ_JJLR01000091.1 Protein Homology CDS 20460 22292 . - 0 ID=cds-WP_001012899.1;Parent=gene-AC57_RS11815;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AC57_RS11815;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 22379 23029 . - . ID=gene-AC57_RS11810;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AC57_RS11810;old_locus_tag=AC57_2531 NZ_JJLR01000091.1 Protein Homology CDS 22379 23029 . - 0 ID=cds-WP_001203392.1;Parent=gene-AC57_RS11810;Dbxref=GenBank:WP_001203392.1;Name=WP_001203392.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416796.2;locus_tag=AC57_RS11810;product=hexitol phosphatase HxpA;protein_id=WP_001203392.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 23040 23534 . - . ID=gene-AC57_RS11805;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AC57_RS11805;old_locus_tag=AC57_2532 NZ_JJLR01000091.1 Protein Homology CDS 23040 23534 . - 0 ID=cds-WP_000426124.1;Parent=gene-AC57_RS11805;Dbxref=GenBank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AC57_RS11805;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 23617 24072 . - . ID=gene-AC57_RS11800;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AC57_RS11800;old_locus_tag=AC57_2533 NZ_JJLR01000091.1 Protein Homology CDS 23617 24072 . - 0 ID=cds-WP_000106627.1;Parent=gene-AC57_RS11800;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AC57_RS11800;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 24410 25612 . + . ID=gene-AC57_RS11790;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AC57_RS11790;old_locus_tag=AC57_2535 NZ_JJLR01000091.1 Protein Homology CDS 24410 25612 . + 0 ID=cds-WP_000095707.1;Parent=gene-AC57_RS11790;Dbxref=GenBank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AC57_RS11790;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 25687 27831 . + . ID=gene-AC57_RS11785;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AC57_RS11785;old_locus_tag=AC57_2536 NZ_JJLR01000091.1 Protein Homology CDS 25687 27831 . + 0 ID=cds-WP_032279647.1;Parent=gene-AC57_RS11785;Dbxref=GenBank:WP_032279647.1;Name=WP_032279647.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416800.1;locus_tag=AC57_RS11785;product=phosphate acetyltransferase;protein_id=WP_032279647.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 28021 29541 . + . ID=gene-AC57_RS11780;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AC57_RS11780;old_locus_tag=AC57_2537 NZ_JJLR01000091.1 Protein Homology CDS 28021 29541 . + 0 ID=cds-WP_032279648.1;Parent=gene-AC57_RS11780;Dbxref=GenBank:WP_032279648.1;Name=WP_032279648.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AC57_RS11780;product=putative basic amino acid antiporter YfcC;protein_id=WP_032279648.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 29574 30116 . - . ID=gene-AC57_RS11775;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AC57_RS11775;old_locus_tag=AC57_2538 NZ_JJLR01000091.1 Protein Homology CDS 29574 30116 . - 0 ID=cds-WP_000437935.1;Parent=gene-AC57_RS11775;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AC57_RS11775;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 30174 30725 . - . ID=gene-AC57_RS11770;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AC57_RS11770;old_locus_tag=AC57_2539 NZ_JJLR01000091.1 Protein Homology CDS 30174 30725 . - 0 ID=cds-WP_000772452.1;Parent=gene-AC57_RS11770;Dbxref=GenBank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AC57_RS11770;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 30781 31425 . - . ID=gene-AC57_RS11765;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AC57_RS11765;old_locus_tag=AC57_2540 NZ_JJLR01000091.1 Protein Homology CDS 30781 31425 . - 0 ID=cds-WP_000042442.1;Parent=gene-AC57_RS11765;Dbxref=GenBank:WP_000042442.1;Name=WP_000042442.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416804.1;locus_tag=AC57_RS11765;product=glutathione transferase;protein_id=WP_000042442.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 31561 32208 . + . ID=gene-AC57_RS11760;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AC57_RS11760;old_locus_tag=AC57_2541 NZ_JJLR01000091.1 Protein Homology CDS 31561 32208 . + 0 ID=cds-WP_000566471.1;Parent=gene-AC57_RS11760;Dbxref=GenBank:WP_000566471.1;Name=WP_000566471.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416805.1;locus_tag=AC57_RS11760;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566471.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 32265 32627 . + . ID=gene-AC57_RS11755;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AC57_RS11755;old_locus_tag=AC57_2542 NZ_JJLR01000091.1 Protein Homology CDS 32265 32627 . + 0 ID=cds-WP_024224014.1;Parent=gene-AC57_RS11755;Dbxref=GenBank:WP_024224014.1;Name=WP_024224014.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AC57_RS11755;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_024224014.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 32648 33541 . + . ID=gene-AC57_RS11750;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AC57_RS11750;old_locus_tag=AC57_2543 NZ_JJLR01000091.1 Protein Homology CDS 32648 33541 . + 0 ID=cds-WP_032237435.1;Parent=gene-AC57_RS11750;Dbxref=GenBank:WP_032237435.1;Name=WP_032237435.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AC57_RS11750;product=TIGR01777 family oxidoreductase;protein_id=WP_032237435.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 33589 34479 . - . ID=gene-AC57_RS11745;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=AC57_RS11745;old_locus_tag=AC57_2544 NZ_JJLR01000091.1 Protein Homology CDS 33589 34479 . - 0 ID=cds-WP_000156149.1;Parent=gene-AC57_RS11745;Dbxref=GenBank:WP_000156149.1;Name=WP_000156149.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AC57_RS11745;product=recombination-promoting nuclease RpnB;protein_id=WP_000156149.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 34676 35449 . - . ID=gene-AC57_RS11740;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AC57_RS11740;old_locus_tag=AC57_2545 NZ_JJLR01000091.1 Protein Homology CDS 34676 35449 . - 0 ID=cds-WP_001293613.1;Parent=gene-AC57_RS11740;Dbxref=GenBank:WP_001293613.1;Name=WP_001293613.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416809.1;locus_tag=AC57_RS11740;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293613.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 35457 36173 . - . ID=gene-AC57_RS11735;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AC57_RS11735;old_locus_tag=AC57_2546 NZ_JJLR01000091.1 Protein Homology CDS 35457 36173 . - 0 ID=cds-WP_000569958.1;Parent=gene-AC57_RS11735;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AC57_RS11735;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 36170 36856 . - . ID=gene-AC57_RS11730;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AC57_RS11730;old_locus_tag=AC57_2547 NZ_JJLR01000091.1 Protein Homology CDS 36170 36856 . - 0 ID=cds-WP_000965522.1;Parent=gene-AC57_RS11730;Dbxref=GenBank:WP_000965522.1;Name=WP_000965522.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AC57_RS11730;product=histidine ABC transporter permease HisQ;protein_id=WP_000965522.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 36946 37728 . - . ID=gene-AC57_RS11725;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AC57_RS11725;old_locus_tag=AC57_2548 NZ_JJLR01000091.1 Protein Homology CDS 36946 37728 . - 0 ID=cds-WP_000737621.1;Parent=gene-AC57_RS11725;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AC57_RS11725;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 37949 38731 . - . ID=gene-AC57_RS11720;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AC57_RS11720;old_locus_tag=AC57_2549 NZ_JJLR01000091.1 Protein Homology CDS 37949 38731 . - 0 ID=cds-WP_000748271.1;Parent=gene-AC57_RS11720;Dbxref=GenBank:WP_000748271.1;Name=WP_000748271.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416813.1;locus_tag=AC57_RS11720;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748271.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 38997 39566 . - . ID=gene-AC57_RS11715;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AC57_RS11715;old_locus_tag=AC57_2550 NZ_JJLR01000091.1 Protein Homology CDS 38997 39566 . - 0 ID=cds-WP_000825700.1;Parent=gene-AC57_RS11715;Dbxref=GenBank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AC57_RS11715;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 39661 41178 . - . ID=gene-AC57_RS11710;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AC57_RS11710;old_locus_tag=AC57_2551 NZ_JJLR01000091.1 Protein Homology CDS 39661 41178 . - 0 ID=cds-WP_000334221.1;Parent=gene-AC57_RS11710;Dbxref=GenBank:WP_000334221.1;Name=WP_000334221.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AC57_RS11710;product=amidophosphoribosyltransferase;protein_id=WP_000334221.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 41215 41703 . - . ID=gene-AC57_RS11705;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AC57_RS11705;old_locus_tag=AC57_2552 NZ_JJLR01000091.1 Protein Homology CDS 41215 41703 . - 0 ID=cds-WP_000262113.1;Parent=gene-AC57_RS11705;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AC57_RS11705;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 41962 42624 . - . ID=gene-AC57_RS11700;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AC57_RS11700;old_locus_tag=AC57_2553 NZ_JJLR01000091.1 Protein Homology CDS 41962 42624 . - 0 ID=cds-WP_000146992.1;Parent=gene-AC57_RS11700;Dbxref=GenBank:WP_000146992.1;Name=WP_000146992.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AC57_RS11700;product=cell division protein DedD;protein_id=WP_000146992.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 42614 43882 . - . ID=gene-AC57_RS11695;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AC57_RS11695;old_locus_tag=AC57_2554 NZ_JJLR01000091.1 Protein Homology CDS 42614 43882 . - 0 ID=cds-WP_032237436.1;Parent=gene-AC57_RS11695;Dbxref=GenBank:WP_032237436.1;Name=WP_032237436.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AC57_RS11695;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_032237436.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 43952 44866 . - . ID=gene-AC57_RS0124540;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AC57_RS0124540;old_locus_tag=AC57_2555 NZ_JJLR01000091.1 Protein Homology CDS 43952 44866 . - 0 ID=cds-WP_000118404.1;Parent=gene-AC57_RS0124540;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AC57_RS0124540;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 45022 45681 . - . ID=gene-AC57_RS11690;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AC57_RS11690;old_locus_tag=AC57_2556 NZ_JJLR01000091.1 Protein Homology CDS 45022 45681 . - 0 ID=cds-WP_000364335.1;Parent=gene-AC57_RS11690;Dbxref=GenBank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AC57_RS11690;product=DedA family protein;protein_id=WP_000364335.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 45764 46576 . - . ID=gene-AC57_RS11685;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AC57_RS11685;old_locus_tag=AC57_2557 NZ_JJLR01000091.1 Protein Homology CDS 45764 46576 . - 0 ID=cds-WP_001283585.1;Parent=gene-AC57_RS11685;Dbxref=GenBank:WP_001283585.1;Name=WP_001283585.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AC57_RS11685;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283585.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 46576 47589 . - . ID=gene-AC57_RS11680;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AC57_RS11680;old_locus_tag=AC57_2558 NZ_JJLR01000091.1 Protein Homology CDS 46576 47589 . - 0 ID=cds-WP_001289167.1;Parent=gene-AC57_RS11680;Dbxref=GenBank:WP_001289167.1;Name=WP_001289167.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AC57_RS11680;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289167.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 47655 48791 . - . ID=gene-AC57_RS11675;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AC57_RS11675;old_locus_tag=AC57_2560 NZ_JJLR01000091.1 Protein Homology CDS 47655 48791 . - 0 ID=cds-WP_000699145.1;Parent=gene-AC57_RS11675;Dbxref=GenBank:WP_000699145.1;Name=WP_000699145.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416823.1;locus_tag=AC57_RS11675;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_000699145.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 48890 49885 . + . ID=gene-AC57_RS11670;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AC57_RS11670;old_locus_tag=AC57_2561 NZ_JJLR01000091.1 Protein Homology CDS 48890 49885 . + 0 ID=cds-WP_000615834.1;Parent=gene-AC57_RS11670;Dbxref=GenBank:WP_000615834.1;Name=WP_000615834.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416824.1;locus_tag=AC57_RS11670;product=flagella biosynthesis regulator Flk;protein_id=WP_000615834.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 49882 51060 . - . ID=gene-AC57_RS11665;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AC57_RS11665;old_locus_tag=AC57_2562 NZ_JJLR01000091.1 Protein Homology CDS 49882 51060 . - 0 ID=cds-WP_000127774.1;Parent=gene-AC57_RS11665;Dbxref=GenBank:WP_000127774.1;Name=WP_000127774.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfcJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416825.1;locus_tag=AC57_RS11665;product=arabinose transporter;protein_id=WP_000127774.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 51325 52545 . - . ID=gene-AC57_RS11660;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AC57_RS11660;old_locus_tag=AC57_2563 NZ_JJLR01000091.1 Protein Homology CDS 51325 52545 . - 0 ID=cds-WP_000817178.1;Parent=gene-AC57_RS11660;Dbxref=GenBank:WP_000817178.1;Name=WP_000817178.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=AC57_RS11660;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 52704 54710 . + . ID=gene-AC57_RS11655;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AC57_RS11655;old_locus_tag=AC57_2564 NZ_JJLR01000091.1 Protein Homology CDS 52704 54710 . + 0 ID=cds-WP_032237437.1;Parent=gene-AC57_RS11655;Dbxref=GenBank:WP_032237437.1;Name=WP_032237437.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416827.4;locus_tag=AC57_RS11655;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_032237437.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 54831 55109 . - . ID=gene-AC57_RS11650;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AC57_RS11650;old_locus_tag=AC57_2565 NZ_JJLR01000091.1 Protein Homology CDS 54831 55109 . - 0 ID=cds-WP_000559764.1;Parent=gene-AC57_RS11650;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AC57_RS11650;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 55143 55691 . - . ID=gene-AC57_RS11645;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AC57_RS11645;old_locus_tag=AC57_2566 NZ_JJLR01000091.1 Protein Homology CDS 55143 55691 . - 0 ID=cds-WP_032175520.1;Parent=gene-AC57_RS11645;Dbxref=GenBank:WP_032175520.1;Name=WP_032175520.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AC57_RS11645;product=elongation factor P hydroxylase;protein_id=WP_032175520.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 55691 56500 . - . ID=gene-AC57_RS11640;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AC57_RS11640;old_locus_tag=AC57_2567 NZ_JJLR01000091.1 Protein Homology CDS 55691 56500 . - 0 ID=cds-WP_000447361.1;Parent=gene-AC57_RS11640;Dbxref=GenBank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AC57_RS11640;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447361.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 56500 57324 . - . ID=gene-AC57_RS11635;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AC57_RS11635;old_locus_tag=AC57_2568 NZ_JJLR01000091.1 Protein Homology CDS 56500 57324 . - 0 ID=cds-WP_001043825.1;Parent=gene-AC57_RS11635;Dbxref=GenBank:WP_001043825.1;Name=WP_001043825.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AC57_RS11635;product=penicillin-insensitive murein endopeptidase;protein_id=WP_001043825.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 57328 58413 . - . ID=gene-AC57_RS11630;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AC57_RS11630;old_locus_tag=AC57_2569 NZ_JJLR01000091.1 Protein Homology CDS 57328 58413 . - 0 ID=cds-WP_001333535.1;Parent=gene-AC57_RS11630;Dbxref=GenBank:WP_001333535.1;Name=WP_001333535.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AC57_RS11630;product=chorismate synthase;protein_id=WP_001333535.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 58448 59380 . - . ID=gene-AC57_RS11625;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AC57_RS11625;old_locus_tag=AC57_2570 NZ_JJLR01000091.1 Protein Homology CDS 58448 59380 . - 0 ID=cds-WP_001300582.1;Parent=gene-AC57_RS11625;Dbxref=GenBank:WP_001300582.1;Name=WP_001300582.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AC57_RS11625;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001300582.1;transl_table=11 NZ_JJLR01000091.1 RefSeq gene 59546 60097 . + . ID=gene-AC57_RS11620;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AC57_RS11620;old_locus_tag=AC57_2571 NZ_JJLR01000091.1 Protein Homology CDS 59546 60097 . + 0 ID=cds-WP_000730806.1;Parent=gene-AC57_RS11620;Dbxref=GenBank:WP_000730806.1;Name=WP_000730806.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416834.1;locus_tag=AC57_RS11620;product=endonuclease SmrB;protein_id=WP_000730806.1;transl_table=11 NZ_JJLR01000091.1 RefSeq pseudogene 60318 60470 . - . ID=gene-AC57_RS0124545;Name=AC57_RS0124545;end_range=60470,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124545;partial=true;pseudo=true NZ_JJLR01000091.1 Protein Homology CDS 60318 60470 . - 0 ID=cds-AC57_RS0124545;Parent=gene-AC57_RS0124545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=60470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0124545;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000092.1 1 55761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000092.1 RefSeq region 1 55761 . + . ID=NZ_JJLR01000092.1:1..55761;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000092.1 RefSeq pseudogene 1 248 . - . ID=gene-AC57_RS11615;Name=AC57_RS11615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS11615;old_locus_tag=AC57_2572;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000092.1 Protein Homology CDS 1 248 . - 0 ID=cds-AC57_RS11615;Parent=gene-AC57_RS11615;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS11615;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 335 1156 . - . ID=gene-AC57_RS11610;Name=yfcO;gbkey=Gene;gene=yfcO;gene_biotype=protein_coding;locus_tag=AC57_RS11610;old_locus_tag=AC57_2573 NZ_JJLR01000092.1 Protein Homology CDS 335 1156 . - 0 ID=cds-WP_000698745.1;Parent=gene-AC57_RS11610;Dbxref=GenBank:WP_000698745.1;Name=WP_000698745.1;gbkey=CDS;gene=yfcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416835.2;locus_tag=AC57_RS11610;product=fimbrial adhesin YfcO;protein_id=WP_000698745.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 1158 1697 . - . ID=gene-AC57_RS11605;Name=yfcP;gbkey=Gene;gene=yfcP;gene_biotype=protein_coding;locus_tag=AC57_RS11605;old_locus_tag=AC57_2574 NZ_JJLR01000092.1 Protein Homology CDS 1158 1697 . - 0 ID=cds-WP_001043398.1;Parent=gene-AC57_RS11605;Dbxref=GenBank:WP_001043398.1;Name=WP_001043398.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcP;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416836.1;locus_tag=AC57_RS11605;product=fimbrial protein;protein_id=WP_001043398.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 1694 2182 . - . ID=gene-AC57_RS11600;Name=yfcQ;gbkey=Gene;gene=yfcQ;gene_biotype=protein_coding;locus_tag=AC57_RS11600;old_locus_tag=AC57_2575 NZ_JJLR01000092.1 Protein Homology CDS 1694 2182 . - 0 ID=cds-WP_001232541.1;Parent=gene-AC57_RS11600;Dbxref=GenBank:WP_001232541.1;Name=WP_001232541.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcQ;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416837.1;locus_tag=AC57_RS11600;product=fimbrial protein;protein_id=WP_001232541.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 2179 2691 . - . ID=gene-AC57_RS11595;Name=yfcR;gbkey=Gene;gene=yfcR;gene_biotype=protein_coding;locus_tag=AC57_RS11595;old_locus_tag=AC57_2576 NZ_JJLR01000092.1 Protein Homology CDS 2179 2691 . - 0 ID=cds-WP_001311011.1;Parent=gene-AC57_RS11595;Dbxref=GenBank:WP_001311011.1;Name=WP_001311011.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416838.1;locus_tag=AC57_RS11595;product=fimbrial protein;protein_id=WP_001311011.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 2691 3443 . - . ID=gene-AC57_RS11590;Name=yfcS;gbkey=Gene;gene=yfcS;gene_biotype=protein_coding;locus_tag=AC57_RS11590;old_locus_tag=AC57_2577 NZ_JJLR01000092.1 Protein Homology CDS 2691 3443 . - 0 ID=cds-WP_032237471.1;Parent=gene-AC57_RS11590;Dbxref=GenBank:WP_032237471.1;Name=WP_032237471.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;gene=yfcS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416839.1;locus_tag=AC57_RS11590;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032237471.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 3463 6108 . - . ID=gene-AC57_RS11585;Name=yfcU;gbkey=Gene;gene=yfcU;gene_biotype=protein_coding;locus_tag=AC57_RS11585;old_locus_tag=AC57_2578 NZ_JJLR01000092.1 Protein Homology CDS 3463 6108 . - 0 ID=cds-WP_032279666.1;Parent=gene-AC57_RS11585;Dbxref=GenBank:WP_032279666.1;Name=WP_032279666.1;gbkey=CDS;gene=yfcU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112832.1;locus_tag=AC57_RS11585;product=fimbrial usher protein YfcU;protein_id=WP_032279666.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 6191 6754 . - . ID=gene-AC57_RS11580;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AC57_RS11580;old_locus_tag=AC57_2579 NZ_JJLR01000092.1 Protein Homology CDS 6191 6754 . - 0 ID=cds-WP_000033332.1;Parent=gene-AC57_RS11580;Dbxref=GenBank:WP_000033332.1;Name=WP_000033332.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416841.1;locus_tag=AC57_RS11580;product=fimbrial protein;protein_id=WP_000033332.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 7438 7923 . - . ID=gene-AC57_RS11575;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AC57_RS11575;old_locus_tag=AC57_2581 NZ_JJLR01000092.1 Protein Homology CDS 7438 7923 . - 0 ID=cds-WP_001195819.1;Parent=gene-AC57_RS11575;Dbxref=GenBank:WP_001195819.1;Name=WP_001195819.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416842.1;locus_tag=AC57_RS11575;product=phosphohistidine phosphatase SixA;protein_id=WP_001195819.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 8126 10270 . - . ID=gene-AC57_RS11570;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AC57_RS11570;old_locus_tag=AC57_2582 NZ_JJLR01000092.1 Protein Homology CDS 8126 10270 . - 0 ID=cds-WP_032237468.1;Parent=gene-AC57_RS11570;Dbxref=GenBank:WP_032237468.1;Name=WP_032237468.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311251.1;locus_tag=AC57_RS11570;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_032237468.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 10270 11580 . - . ID=gene-AC57_RS11565;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AC57_RS11565;old_locus_tag=AC57_2583 NZ_JJLR01000092.1 Protein Homology CDS 10270 11580 . - 0 ID=cds-WP_001388103.1;Parent=gene-AC57_RS11565;Dbxref=GenBank:WP_001388103.1;Name=WP_001388103.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AC57_RS11565;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_001388103.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 11761 12045 . - . ID=gene-AC57_RS11560;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AC57_RS11560;old_locus_tag=AC57_2584 NZ_JJLR01000092.1 Protein Homology CDS 11761 12045 . - 0 ID=cds-WP_001296261.1;Parent=gene-AC57_RS11560;Dbxref=GenBank:WP_001296261.1;Name=WP_001296261.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AC57_RS11560;product=YfcZ/YiiS family protein;protein_id=WP_001296261.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 12417 13757 . + . ID=gene-AC57_RS11555;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AC57_RS11555;old_locus_tag=AC57_2585 NZ_JJLR01000092.1 Protein Homology CDS 12417 13757 . + 0 ID=cds-WP_001400735.1;Parent=gene-AC57_RS11555;Dbxref=GenBank:WP_001400735.1;Name=WP_001400735.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=AC57_RS11555;product=long-chain fatty acid transporter FadL;protein_id=WP_001400735.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 14122 15180 . + . ID=gene-AC57_RS11550;Name=yfdF;gbkey=Gene;gene=yfdF;gene_biotype=protein_coding;locus_tag=AC57_RS11550;old_locus_tag=AC57_2586 NZ_JJLR01000092.1 Protein Homology CDS 14122 15180 . + 0 ID=cds-WP_032237465.1;Parent=gene-AC57_RS11550;Dbxref=GenBank:WP_032237465.1;Name=WP_032237465.1;gbkey=CDS;gene=yfdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416847.1;locus_tag=AC57_RS11550;product=protein YfdF;protein_id=WP_032237465.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 15362 16117 . - . ID=gene-AC57_RS11545;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AC57_RS11545;old_locus_tag=AC57_2587 NZ_JJLR01000092.1 Protein Homology CDS 15362 16117 . - 0 ID=cds-WP_000776768.1;Parent=gene-AC57_RS11545;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AC57_RS11545;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 16411 17343 . + . ID=gene-AC57_RS11540;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AC57_RS11540;old_locus_tag=AC57_2589 NZ_JJLR01000092.1 Protein Homology CDS 16411 17343 . + 0 ID=cds-WP_000368140.1;Parent=gene-AC57_RS11540;Dbxref=GenBank:WP_000368140.1;Name=WP_000368140.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416849.1;locus_tag=AC57_RS11540;product=formate/nitrite transporter family protein;protein_id=WP_000368140.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 17419 17493 . + . ID=gene-AC57_RS11535;Name=AC57_RS11535;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11535;old_locus_tag=AC57_2590 NZ_JJLR01000092.1 tRNAscan-SE tRNA 17419 17493 . + . ID=rna-AC57_RS11535;Parent=gene-AC57_RS11535;anticodon=(pos:17452..17454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11535;product=tRNA-Arg NZ_JJLR01000092.1 tRNAscan-SE exon 17419 17493 . + . ID=exon-AC57_RS11535-1;Parent=rna-AC57_RS11535;anticodon=(pos:17452..17454);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11535;product=tRNA-Arg NZ_JJLR01000092.1 RefSeq gene 17589 18524 . - . ID=gene-AC57_RS11530;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=AC57_RS11530;old_locus_tag=AC57_2591 NZ_JJLR01000092.1 Protein Homology CDS 17589 18524 . - 0 ID=cds-WP_032237464.1;Parent=gene-AC57_RS11530;Dbxref=GenBank:WP_032237464.1;Name=WP_032237464.1;Ontology_term=GO:0006355,GO:0009063,GO:0003677,GO:0003700,GO:0005737;gbkey=CDS;gene=dsdC;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416865.1;locus_tag=AC57_RS11530;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_032237464.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 18742 20079 . + . ID=gene-AC57_RS11525;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=AC57_RS11525;old_locus_tag=AC57_2592 NZ_JJLR01000092.1 Protein Homology CDS 18742 20079 . + 0 ID=cds-WP_032237463.1;Parent=gene-AC57_RS11525;Dbxref=GenBank:WP_032237463.1;Name=WP_032237463.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AC57_RS11525;product=D-serine transporter DsdX;protein_id=WP_032237463.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 20097 21425 . + . ID=gene-AC57_RS11520;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AC57_RS11520;old_locus_tag=AC57_2593 NZ_JJLR01000092.1 Protein Homology CDS 20097 21425 . + 0 ID=cds-WP_000426426.1;Parent=gene-AC57_RS11520;Dbxref=GenBank:WP_000426426.1;Name=WP_000426426.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AC57_RS11520;product=D-serine ammonia-lyase;protein_id=WP_000426426.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 21533 23071 . - . ID=gene-AC57_RS11515;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AC57_RS11515;old_locus_tag=AC57_2594 NZ_JJLR01000092.1 Protein Homology CDS 21533 23071 . - 0 ID=cds-WP_001018731.1;Parent=gene-AC57_RS11515;Dbxref=GenBank:WP_001018731.1;Name=WP_001018731.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AC57_RS11515;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018731.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 23071 24234 . - . ID=gene-AC57_RS11510;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AC57_RS11510;old_locus_tag=AC57_2595 NZ_JJLR01000092.1 Protein Homology CDS 23071 24234 . - 0 ID=cds-WP_023281394.1;Parent=gene-AC57_RS11510;Dbxref=GenBank:WP_023281394.1;Name=WP_023281394.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416869.1;locus_tag=AC57_RS11510;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_023281394.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 24650 25264 . + . ID=gene-AC57_RS11505;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AC57_RS11505;old_locus_tag=AC57_2596 NZ_JJLR01000092.1 Protein Homology CDS 24650 25264 . + 0 ID=cds-WP_000991370.1;Parent=gene-AC57_RS11505;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AC57_RS11505;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 25269 28862 . + . ID=gene-AC57_RS11500;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AC57_RS11500;old_locus_tag=AC57_2597 NZ_JJLR01000092.1 Protein Homology CDS 25269 28862 . + 0 ID=cds-WP_071999881.1;Parent=gene-AC57_RS11500;Dbxref=GenBank:WP_071999881.1;Name=WP_071999881.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416871.1;locus_tag=AC57_RS11500;product=acid-sensing system histidine kinase EvgS;protein_id=WP_071999881.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 28918 30063 . - . ID=gene-AC57_RS11495;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AC57_RS11495;old_locus_tag=AC57_2598 NZ_JJLR01000092.1 Protein Homology CDS 28918 30063 . - 0 ID=cds-WP_001296867.1;Parent=gene-AC57_RS11495;Dbxref=GenBank:WP_001296867.1;Name=WP_001296867.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AC57_RS11495;product=CoA:oxalate CoA-transferase;protein_id=WP_001296867.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 30137 31081 . - . ID=gene-AC57_RS11490;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AC57_RS11490;old_locus_tag=AC57_2599 NZ_JJLR01000092.1 Protein Homology CDS 30137 31081 . - 0 ID=cds-WP_000955025.1;Parent=gene-AC57_RS11490;Dbxref=GenBank:WP_000955025.1;Name=WP_000955025.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AC57_RS11490;product=transporter YfdV;protein_id=WP_000955025.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 31151 32845 . - . ID=gene-AC57_RS11485;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AC57_RS11485;old_locus_tag=AC57_2600 NZ_JJLR01000092.1 Protein Homology CDS 31151 32845 . - 0 ID=cds-WP_001283499.1;Parent=gene-AC57_RS11485;Dbxref=GenBank:WP_001283499.1;Name=WP_001283499.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AC57_RS11485;product=oxalyl-CoA decarboxylase;protein_id=WP_001283499.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 32899 34149 . - . ID=gene-AC57_RS11480;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AC57_RS11480;old_locus_tag=AC57_2601 NZ_JJLR01000092.1 Protein Homology CDS 32899 34149 . - 0 ID=cds-WP_000106766.1;Parent=gene-AC57_RS11480;Dbxref=GenBank:WP_000106766.1;Name=WP_000106766.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AC57_RS11480;product=formyl-CoA transferase;protein_id=WP_000106766.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 34662 35297 . - . ID=gene-AC57_RS11475;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AC57_RS11475;old_locus_tag=AC57_2602 NZ_JJLR01000092.1 Protein Homology CDS 34662 35297 . - 0 ID=cds-WP_000825600.1;Parent=gene-AC57_RS11475;Dbxref=GenBank:WP_000825600.1;Name=WP_000825600.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416876.1;locus_tag=AC57_RS11475;product=YfdX family protein;protein_id=WP_000825600.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 35593 35868 . + . ID=gene-AC57_RS0124550;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AC57_RS0124550 NZ_JJLR01000092.1 Protein Homology CDS 35593 35868 . + 0 ID=cds-WP_000867631.1;Parent=gene-AC57_RS0124550;Dbxref=GenBank:WP_000867631.1;Name=WP_000867631.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416877.1;locus_tag=AC57_RS0124550;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867631.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 35945 36187 . - . ID=gene-AC57_RS11470;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=AC57_RS11470;old_locus_tag=AC57_2604 NZ_JJLR01000092.1 Protein Homology CDS 35945 36187 . - 0 ID=cds-WP_001430626.1;Parent=gene-AC57_RS11470;Dbxref=GenBank:WP_001430626.1;Name=WP_001430626.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416878.1;locus_tag=AC57_RS11470;product=YfdY family protein;protein_id=WP_001430626.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 36540 37460 . + . ID=gene-AC57_RS11465;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AC57_RS11465;old_locus_tag=AC57_2605 NZ_JJLR01000092.1 Protein Homology CDS 36540 37460 . + 0 ID=cds-WP_032279667.1;Parent=gene-AC57_RS11465;Dbxref=GenBank:WP_032279667.1;Name=WP_032279667.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AC57_RS11465;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_032279667.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 37816 37887 . + . ID=gene-AC57_RS29140;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AC57_RS29140 NZ_JJLR01000092.1 Protein Homology CDS 37816 37887 . + 0 ID=cds-WP_010723117.1;Parent=gene-AC57_RS29140;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AC57_RS29140;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 37952 39190 . - . ID=gene-AC57_RS11460;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AC57_RS11460;old_locus_tag=AC57_2608 NZ_JJLR01000092.1 Protein Homology CDS 37952 39190 . - 0 ID=cds-WP_000785931.1;Parent=gene-AC57_RS11460;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AC57_RS11460;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 39566 41263 . + . ID=gene-AC57_RS11455;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AC57_RS11455;old_locus_tag=AC57_2609 NZ_JJLR01000092.1 Protein Homology CDS 39566 41263 . + 0 ID=cds-WP_000544359.1;Parent=gene-AC57_RS11455;Dbxref=GenBank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AC57_RS11455;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 41278 42012 . + . ID=gene-AC57_RS11450;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AC57_RS11450;old_locus_tag=AC57_2610 NZ_JJLR01000092.1 Protein Homology CDS 41278 42012 . + 0 ID=cds-WP_001295458.1;Parent=gene-AC57_RS11450;Dbxref=GenBank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AC57_RS11450;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 42025 42882 . + . ID=gene-AC57_RS11445;Name=ypdC;gbkey=Gene;gene=ypdC;gene_biotype=protein_coding;locus_tag=AC57_RS11445;old_locus_tag=AC57_2611 NZ_JJLR01000092.1 Protein Homology CDS 42025 42882 . + 0 ID=cds-WP_000646835.1;Parent=gene-AC57_RS11445;Dbxref=GenBank:WP_000646835.1;Name=WP_000646835.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ypdC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416883.1;locus_tag=AC57_RS11445;product=AraC family transcriptional regulator;protein_id=WP_000646835.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 42885 45380 . - . ID=gene-AC57_RS11440;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC57_RS11440;old_locus_tag=AC57_2612 NZ_JJLR01000092.1 Protein Homology CDS 42885 45380 . - 0 ID=cds-WP_000955906.1;Parent=gene-AC57_RS11440;Dbxref=GenBank:WP_000955906.1;Name=WP_000955906.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416884.1;locus_tag=AC57_RS11440;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000955906.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 45405 46442 . - . ID=gene-AC57_RS11435;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AC57_RS11435;old_locus_tag=AC57_2613 NZ_JJLR01000092.1 Protein Homology CDS 45405 46442 . - 0 ID=cds-WP_000366028.1;Parent=gene-AC57_RS11435;Dbxref=GenBank:WP_000366028.1;Name=WP_000366028.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416885.1;locus_tag=AC57_RS11435;product=aminopeptidase;protein_id=WP_000366028.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 46442 47527 . - . ID=gene-AC57_RS11430;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AC57_RS11430;old_locus_tag=AC57_2614 NZ_JJLR01000092.1 Protein Homology CDS 46442 47527 . - 0 ID=cds-WP_032279668.1;Parent=gene-AC57_RS11430;Dbxref=GenBank:WP_032279668.1;Name=WP_032279668.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416886.1;locus_tag=AC57_RS11430;product=aminopeptidase;protein_id=WP_032279668.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 47542 48789 . - . ID=gene-AC57_RS11425;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AC57_RS11425;old_locus_tag=AC57_2615 NZ_JJLR01000092.1 Protein Homology CDS 47542 48789 . - 0 ID=cds-WP_000985359.1;Parent=gene-AC57_RS11425;Dbxref=GenBank:WP_000985359.1;Name=WP_000985359.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416887.1;locus_tag=AC57_RS11425;product=PTS fructose transporter subunit IIC;protein_id=WP_000985359.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 48811 49137 . - . ID=gene-AC57_RS11420;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AC57_RS11420;old_locus_tag=AC57_2616 NZ_JJLR01000092.1 Protein Homology CDS 48811 49137 . - 0 ID=cds-WP_000038456.1;Parent=gene-AC57_RS11420;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AC57_RS11420;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 49356 50321 . - . ID=gene-AC57_RS11415;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AC57_RS11415;old_locus_tag=AC57_2617 NZ_JJLR01000092.1 Protein Homology CDS 49356 50321 . - 0 ID=cds-WP_000170346.1;Parent=gene-AC57_RS11415;Dbxref=GenBank:WP_000170346.1;Name=WP_000170346.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AC57_RS11415;product=glucokinase;protein_id=WP_000170346.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 50525 51781 . + . ID=gene-AC57_RS11410;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AC57_RS11410;old_locus_tag=AC57_2618 NZ_JJLR01000092.1 Protein Homology CDS 50525 51781 . + 0 ID=cds-WP_000903148.1;Parent=gene-AC57_RS11410;Dbxref=GenBank:WP_000903148.1;Name=WP_000903148.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AC57_RS11410;product=ion channel protein;protein_id=WP_000903148.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 51896 52222 . + . ID=gene-AC57_RS11405;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AC57_RS11405;old_locus_tag=AC57_2619 NZ_JJLR01000092.1 Protein Homology CDS 51896 52222 . + 0 ID=cds-WP_000490072.1;Parent=gene-AC57_RS11405;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AC57_RS11405;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 52363 53601 . - . ID=gene-AC57_RS11400;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AC57_RS11400;old_locus_tag=AC57_2620 NZ_JJLR01000092.1 Protein Homology CDS 52363 53601 . - 0 ID=cds-WP_024170625.1;Parent=gene-AC57_RS11400;Dbxref=GenBank:WP_024170625.1;Name=WP_024170625.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AC57_RS11400;product=Nramp family divalent metal transporter;protein_id=WP_024170625.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 53582 53671 . - . ID=gene-AC57_RS31255;Name=AC57_RS31255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31255 NZ_JJLR01000092.1 Protein Homology CDS 53582 53671 . - 0 ID=cds-WP_240811045.1;Parent=gene-AC57_RS31255;Dbxref=GenBank:WP_240811045.1;Name=WP_240811045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AC57_RS31255;product=protein YpeD;protein_id=WP_240811045.1;transl_table=11 NZ_JJLR01000092.1 RefSeq gene 53937 55139 . + . ID=gene-AC57_RS11395;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AC57_RS11395;old_locus_tag=AC57_2621 NZ_JJLR01000092.1 Protein Homology CDS 53937 55139 . + 0 ID=cds-WP_000376337.1;Parent=gene-AC57_RS11395;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AC57_RS11395;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JJLR01000092.1 RefSeq pseudogene 55226 55761 . + . ID=gene-AC57_RS11390;Name=AC57_RS11390;end_range=55761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS11390;old_locus_tag=AC57_2622;partial=true;pseudo=true NZ_JJLR01000092.1 Protein Homology CDS 55226 55761 . + 0 ID=cds-AC57_RS11390;Parent=gene-AC57_RS11390;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=55761,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS11390;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000093.1 1 559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000093.1 RefSeq region 1 559 . + . ID=NZ_JJLR01000093.1:1..559;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000093.1 RefSeq gene 70 225 . + . ID=gene-AC57_RS29145;Name=AC57_RS29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29145;old_locus_tag=AC57_2623 NZ_JJLR01000093.1 GeneMarkS-2+ CDS 70 225 . + 0 ID=cds-WP_000587091.1;Parent=gene-AC57_RS29145;Dbxref=GenBank:WP_000587091.1;Name=WP_000587091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS29145;product=hypothetical protein;protein_id=WP_000587091.1;transl_table=11 NZ_JJLR01000093.1 RefSeq pseudogene 392 559 . - . ID=gene-AC57_RS30295;Name=AC57_RS30295;end_range=559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30295;partial=true;pseudo=true NZ_JJLR01000093.1 Protein Homology CDS 392 559 . - 0 ID=cds-AC57_RS30295;Parent=gene-AC57_RS30295;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30295;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000094.1 1 53119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000094.1 RefSeq region 1 53119 . + . ID=NZ_JJLR01000094.1:1..53119;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000094.1 RefSeq gene 1 103 . + . ID=gene-AC57_RS30780;Name=AC57_RS30780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30780;partial=true;start_range=.,1 NZ_JJLR01000094.1 Protein Homology CDS 1 103 . + 1 ID=cds-WP_024169026.1;Parent=gene-AC57_RS30780;Dbxref=GenBank:WP_024169026.1;Name=WP_024169026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30780;partial=true;product=hypothetical protein;protein_id=WP_024169026.1;start_range=.,1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 303 2492 . - . ID=gene-AC57_RS11385;Name=pdeA;gbkey=Gene;gene=pdeA;gene_biotype=protein_coding;locus_tag=AC57_RS11385;old_locus_tag=AC57_2624 NZ_JJLR01000094.1 Protein Homology CDS 303 2492 . - 0 ID=cds-WP_000497400.1;Parent=gene-AC57_RS11385;Dbxref=GenBank:WP_000497400.1;Name=WP_000497400.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;gene=pdeA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416896.4;locus_tag=AC57_RS11385;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_000497400.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 2701 2776 . - . ID=gene-AC57_RS11380;Name=AC57_RS11380;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11380;old_locus_tag=AC57_2625 NZ_JJLR01000094.1 tRNAscan-SE tRNA 2701 2776 . - . ID=rna-AC57_RS11380;Parent=gene-AC57_RS11380;anticodon=(pos:complement(2741..2743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11380;product=tRNA-Ala NZ_JJLR01000094.1 tRNAscan-SE exon 2701 2776 . - . ID=exon-AC57_RS11380-1;Parent=rna-AC57_RS11380;anticodon=(pos:complement(2741..2743));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11380;product=tRNA-Ala NZ_JJLR01000094.1 RefSeq gene 2816 2891 . - . ID=gene-AC57_RS11375;Name=AC57_RS11375;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11375;old_locus_tag=AC57_2626 NZ_JJLR01000094.1 tRNAscan-SE tRNA 2816 2891 . - . ID=rna-AC57_RS11375;Parent=gene-AC57_RS11375;anticodon=(pos:complement(2856..2858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11375;product=tRNA-Ala NZ_JJLR01000094.1 tRNAscan-SE exon 2816 2891 . - . ID=exon-AC57_RS11375-1;Parent=rna-AC57_RS11375;anticodon=(pos:complement(2856..2858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11375;product=tRNA-Ala NZ_JJLR01000094.1 RefSeq gene 2931 3006 . - . ID=gene-AC57_RS11370;Name=AC57_RS11370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11370;old_locus_tag=AC57_2627 NZ_JJLR01000094.1 tRNAscan-SE tRNA 2931 3006 . - . ID=rna-AC57_RS11370;Parent=gene-AC57_RS11370;anticodon=(pos:complement(2971..2973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11370;product=tRNA-Ala NZ_JJLR01000094.1 tRNAscan-SE exon 2931 3006 . - . ID=exon-AC57_RS11370-1;Parent=rna-AC57_RS11370;anticodon=(pos:complement(2971..2973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11370;product=tRNA-Ala NZ_JJLR01000094.1 RefSeq gene 3046 3121 . - . ID=gene-AC57_RS11365;Name=AC57_RS11365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11365;old_locus_tag=AC57_2628 NZ_JJLR01000094.1 tRNAscan-SE tRNA 3046 3121 . - . ID=rna-AC57_RS11365;Parent=gene-AC57_RS11365;anticodon=(pos:complement(3086..3088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11365;product=tRNA-Ala NZ_JJLR01000094.1 tRNAscan-SE exon 3046 3121 . - . ID=exon-AC57_RS11365-1;Parent=rna-AC57_RS11365;anticodon=(pos:complement(3086..3088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11365;product=tRNA-Ala NZ_JJLR01000094.1 RefSeq gene 3342 3701 . + . ID=gene-AC57_RS11360;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AC57_RS11360;old_locus_tag=AC57_2629 NZ_JJLR01000094.1 Protein Homology CDS 3342 3701 . + 0 ID=cds-WP_000472021.1;Parent=gene-AC57_RS11360;Dbxref=GenBank:WP_000472021.1;Name=WP_000472021.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AC57_RS11360;product=YfeC-like transcriptional regulator;protein_id=WP_000472021.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 3703 4095 . + . ID=gene-AC57_RS11355;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=AC57_RS11355;old_locus_tag=AC57_2630 NZ_JJLR01000094.1 Protein Homology CDS 3703 4095 . + 0 ID=cds-WP_000826503.1;Parent=gene-AC57_RS11355;Dbxref=GenBank:WP_000826503.1;Name=WP_000826503.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfeD;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AC57_RS11355;product=MerR family transcriptional regulator;protein_id=WP_000826503.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 4147 5562 . - . ID=gene-AC57_RS11350;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AC57_RS11350;old_locus_tag=AC57_2631 NZ_JJLR01000094.1 Protein Homology CDS 4147 5562 . - 0 ID=cds-WP_000695655.1;Parent=gene-AC57_RS11350;Dbxref=GenBank:WP_000695655.1;Name=WP_000695655.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416899.1;locus_tag=AC57_RS11350;product=glutamate--tRNA ligase;protein_id=WP_000695655.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 5821 5896 . + . ID=gene-AC57_RS11345;Name=AC57_RS11345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11345;old_locus_tag=AC57_2633 NZ_JJLR01000094.1 tRNAscan-SE tRNA 5821 5896 . + . ID=rna-AC57_RS11345;Parent=gene-AC57_RS11345;anticodon=(pos:5854..5856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11345;product=tRNA-Val NZ_JJLR01000094.1 tRNAscan-SE exon 5821 5896 . + . ID=exon-AC57_RS11345-1;Parent=rna-AC57_RS11345;anticodon=(pos:5854..5856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11345;product=tRNA-Val NZ_JJLR01000094.1 RefSeq gene 5941 6016 . + . ID=gene-AC57_RS11340;Name=AC57_RS11340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11340;old_locus_tag=AC57_2634 NZ_JJLR01000094.1 tRNAscan-SE tRNA 5941 6016 . + . ID=rna-AC57_RS11340;Parent=gene-AC57_RS11340;anticodon=(pos:5974..5976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11340;product=tRNA-Val NZ_JJLR01000094.1 tRNAscan-SE exon 5941 6016 . + . ID=exon-AC57_RS11340-1;Parent=rna-AC57_RS11340;anticodon=(pos:5974..5976);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11340;product=tRNA-Val NZ_JJLR01000094.1 RefSeq gene 6061 6136 . + . ID=gene-AC57_RS11335;Name=AC57_RS11335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11335;old_locus_tag=AC57_2635 NZ_JJLR01000094.1 tRNAscan-SE tRNA 6061 6136 . + . ID=rna-AC57_RS11335;Parent=gene-AC57_RS11335;anticodon=(pos:6094..6096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11335;product=tRNA-Val NZ_JJLR01000094.1 tRNAscan-SE exon 6061 6136 . + . ID=exon-AC57_RS11335-1;Parent=rna-AC57_RS11335;anticodon=(pos:6094..6096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11335;product=tRNA-Val NZ_JJLR01000094.1 RefSeq gene 6181 6256 . + . ID=gene-AC57_RS11330;Name=AC57_RS11330;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11330;old_locus_tag=AC57_2636 NZ_JJLR01000094.1 tRNAscan-SE tRNA 6181 6256 . + . ID=rna-AC57_RS11330;Parent=gene-AC57_RS11330;anticodon=(pos:6214..6216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11330;product=tRNA-Val NZ_JJLR01000094.1 tRNAscan-SE exon 6181 6256 . + . ID=exon-AC57_RS11330-1;Parent=rna-AC57_RS11330;anticodon=(pos:6214..6216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11330;product=tRNA-Val NZ_JJLR01000094.1 RefSeq gene 6303 6378 . + . ID=gene-AC57_RS11325;Name=AC57_RS11325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11325;old_locus_tag=AC57_2637 NZ_JJLR01000094.1 tRNAscan-SE tRNA 6303 6378 . + . ID=rna-AC57_RS11325;Parent=gene-AC57_RS11325;anticodon=(pos:6336..6338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11325;product=tRNA-Val NZ_JJLR01000094.1 tRNAscan-SE exon 6303 6378 . + . ID=exon-AC57_RS11325-1;Parent=rna-AC57_RS11325;anticodon=(pos:6336..6338);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11325;product=tRNA-Val NZ_JJLR01000094.1 RefSeq gene 6383 6458 . + . ID=gene-AC57_RS11320;Name=AC57_RS11320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS11320;old_locus_tag=AC57_2638 NZ_JJLR01000094.1 tRNAscan-SE tRNA 6383 6458 . + . ID=rna-AC57_RS11320;Parent=gene-AC57_RS11320;anticodon=(pos:6416..6418);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11320;product=tRNA-Lys NZ_JJLR01000094.1 tRNAscan-SE exon 6383 6458 . + . ID=exon-AC57_RS11320-1;Parent=rna-AC57_RS11320;anticodon=(pos:6416..6418);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS11320;product=tRNA-Lys NZ_JJLR01000094.1 RefSeq gene 7035 7919 . - . ID=gene-AC57_RS11315;Name=xapR;gbkey=Gene;gene=xapR;gene_biotype=protein_coding;locus_tag=AC57_RS11315;old_locus_tag=AC57_2640 NZ_JJLR01000094.1 Protein Homology CDS 7035 7919 . - 0 ID=cds-WP_032279767.1;Parent=gene-AC57_RS11315;Dbxref=GenBank:WP_032279767.1;Name=WP_032279767.1;gbkey=CDS;gene=xapR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416900.1;locus_tag=AC57_RS11315;product=DNA-binding transcriptional regulator XapR;protein_id=WP_032279767.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 7960 8118 . - . ID=gene-AC57_RS11310;Name=AC57_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS11310;old_locus_tag=AC57_2641 NZ_JJLR01000094.1 Protein Homology CDS 7960 8118 . - 0 ID=cds-WP_000651752.1;Parent=gene-AC57_RS11310;Dbxref=GenBank:WP_000651752.1;Name=WP_000651752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392449.1;locus_tag=AC57_RS11310;product=DUF1427 family protein;protein_id=WP_000651752.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 8171 9427 . - . ID=gene-AC57_RS11305;Name=xapB;gbkey=Gene;gene=xapB;gene_biotype=protein_coding;locus_tag=AC57_RS11305;old_locus_tag=AC57_2642 NZ_JJLR01000094.1 Protein Homology CDS 8171 9427 . - 0 ID=cds-WP_032237515.1;Parent=gene-AC57_RS11305;Dbxref=GenBank:WP_032237515.1;Name=WP_032237515.1;gbkey=CDS;gene=xapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416901.1;locus_tag=AC57_RS11305;product=xanthosine/proton symporter XapB;protein_id=WP_032237515.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 9487 10320 . - . ID=gene-AC57_RS11300;Name=xapA;gbkey=Gene;gene=xapA;gene_biotype=protein_coding;locus_tag=AC57_RS11300;old_locus_tag=AC57_2643 NZ_JJLR01000094.1 Protein Homology CDS 9487 10320 . - 0 ID=cds-WP_000084573.1;Parent=gene-AC57_RS11300;Dbxref=GenBank:WP_000084573.1;Name=WP_000084573.1;Ontology_term=GO:0055086,GO:0004731,GO:0005737;gbkey=CDS;gene=xapA;go_component=cytoplasm|0005737||IEA;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing small molecule metabolic process|0055086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416902.1;locus_tag=AC57_RS11300;product=xanthosine phosphorylase;protein_id=WP_000084573.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 10569 11333 . + . ID=gene-AC57_RS11295;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;locus_tag=AC57_RS11295;old_locus_tag=AC57_2644 NZ_JJLR01000094.1 Protein Homology CDS 10569 11333 . + 0 ID=cds-WP_000716421.1;Parent=gene-AC57_RS11295;Dbxref=GenBank:WP_000716421.1;Name=WP_000716421.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yfeN;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416903.1;locus_tag=AC57_RS11295;product=outer membrane protein OmpK;protein_id=WP_000716421.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 11372 12298 . - . ID=gene-AC57_RS11290;Name=yfeR;gbkey=Gene;gene=yfeR;gene_biotype=protein_coding;locus_tag=AC57_RS11290;old_locus_tag=AC57_2645 NZ_JJLR01000094.1 Protein Homology CDS 11372 12298 . - 0 ID=cds-WP_001109794.1;Parent=gene-AC57_RS11290;Dbxref=GenBank:WP_001109794.1;Name=WP_001109794.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=yfeR;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AC57_RS11290;product=LysR family transcriptional regulator;protein_id=WP_001109794.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 12388 13386 . + . ID=gene-AC57_RS11285;Name=yfeH;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=AC57_RS11285;old_locus_tag=AC57_2646 NZ_JJLR01000094.1 Protein Homology CDS 12388 13386 . + 0 ID=cds-WP_000765604.1;Parent=gene-AC57_RS11285;Dbxref=GenBank:WP_000765604.1;Name=WP_000765604.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;gene=yfeH;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311309.1;locus_tag=AC57_RS11285;product=bile acid:sodium symporter family protein;protein_id=WP_000765604.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 13383 13601 . - . ID=gene-AC57_RS11280;Name=ypeB;gbkey=Gene;gene=ypeB;gene_biotype=protein_coding;locus_tag=AC57_RS11280;old_locus_tag=AC57_2647 NZ_JJLR01000094.1 Protein Homology CDS 13383 13601 . - 0 ID=cds-WP_000410201.1;Parent=gene-AC57_RS11280;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;gene=ypeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AC57_RS11280;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 13603 15618 . - . ID=gene-AC57_RS11275;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AC57_RS11275;old_locus_tag=AC57_2648 NZ_JJLR01000094.1 Protein Homology CDS 13603 15618 . - 0 ID=cds-WP_000443661.1;Parent=gene-AC57_RS11275;Dbxref=GenBank:WP_000443661.1;Name=WP_000443661.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416906.1;locus_tag=AC57_RS11275;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443661.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 15689 16675 . - . ID=gene-AC57_RS11270;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AC57_RS11270;old_locus_tag=AC57_2649 NZ_JJLR01000094.1 Protein Homology CDS 15689 16675 . - 0 ID=cds-WP_001300494.1;Parent=gene-AC57_RS11270;Dbxref=GenBank:WP_001300494.1;Name=WP_001300494.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416907.1;locus_tag=AC57_RS11270;product=cell division protein ZipA;protein_id=WP_001300494.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 16905 17666 . + . ID=gene-AC57_RS11265;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AC57_RS11265;old_locus_tag=AC57_2650 NZ_JJLR01000094.1 Protein Homology CDS 16905 17666 . + 0 ID=cds-WP_000254839.1;Parent=gene-AC57_RS11265;Dbxref=GenBank:WP_000254839.1;Name=WP_000254839.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AC57_RS11265;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 17851 18822 . + . ID=gene-AC57_RS11260;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AC57_RS11260;old_locus_tag=AC57_2651 NZ_JJLR01000094.1 Protein Homology CDS 17851 18822 . + 0 ID=cds-WP_000034402.1;Parent=gene-AC57_RS11260;Dbxref=GenBank:WP_000034402.1;Name=WP_000034402.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AC57_RS11260;product=cysteine synthase A;protein_id=WP_000034402.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 19206 19463 . + . ID=gene-AC57_RS11255;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AC57_RS11255;old_locus_tag=AC57_2652 NZ_JJLR01000094.1 Protein Homology CDS 19206 19463 . + 0 ID=cds-WP_000487600.1;Parent=gene-AC57_RS11255;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AC57_RS11255;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 19508 21235 . + . ID=gene-AC57_RS11250;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AC57_RS11250;old_locus_tag=AC57_2653 NZ_JJLR01000094.1 Protein Homology CDS 19508 21235 . + 0 ID=cds-WP_000623140.1;Parent=gene-AC57_RS11250;Dbxref=GenBank:WP_000623140.1;Name=WP_000623140.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416911.1;locus_tag=AC57_RS11250;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623140.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 21276 21785 . + . ID=gene-AC57_RS11245;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AC57_RS11245;old_locus_tag=AC57_2654 NZ_JJLR01000094.1 Protein Homology CDS 21276 21785 . + 0 ID=cds-WP_000522247.1;Parent=gene-AC57_RS11245;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AC57_RS11245;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 21828 22679 . - . ID=gene-AC57_RS11240;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AC57_RS11240;old_locus_tag=AC57_2655 NZ_JJLR01000094.1 Protein Homology CDS 21828 22679 . - 0 ID=cds-WP_000096674.1;Parent=gene-AC57_RS11240;Dbxref=GenBank:WP_000096674.1;Name=WP_000096674.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416913.1;locus_tag=AC57_RS11240;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096674.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 22784 23152 . + . ID=gene-AC57_RS11235;Name=yfeK;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=AC57_RS11235;old_locus_tag=AC57_2656 NZ_JJLR01000094.1 Protein Homology CDS 22784 23152 . + 0 ID=cds-WP_000719963.1;Parent=gene-AC57_RS11235;Dbxref=GenBank:WP_000719963.1;Name=WP_000719963.1;gbkey=CDS;gene=yfeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001592994.1;locus_tag=AC57_RS11235;product=YfeK family protein;protein_id=WP_000719963.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 23155 24066 . - . ID=gene-AC57_RS11230;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AC57_RS11230;old_locus_tag=AC57_2657 NZ_JJLR01000094.1 Protein Homology CDS 23155 24066 . - 0 ID=cds-WP_000105477.1;Parent=gene-AC57_RS11230;Dbxref=GenBank:WP_000105477.1;Name=WP_000105477.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416916.1;locus_tag=AC57_RS11230;product=cysteine synthase B;protein_id=WP_000105477.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 24201 25298 . - . ID=gene-AC57_RS11225;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AC57_RS11225;old_locus_tag=AC57_2658 NZ_JJLR01000094.1 Protein Homology CDS 24201 25298 . - 0 ID=cds-WP_001400775.1;Parent=gene-AC57_RS11225;Dbxref=GenBank:WP_001400775.1;Name=WP_001400775.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AC57_RS11225;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_001400775.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 25288 26163 . - . ID=gene-AC57_RS11220;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AC57_RS11220;old_locus_tag=AC57_2659 NZ_JJLR01000094.1 Protein Homology CDS 25288 26163 . - 0 ID=cds-WP_000852686.1;Parent=gene-AC57_RS11220;Dbxref=GenBank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AC57_RS11220;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 26163 26996 . - . ID=gene-AC57_RS11215;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AC57_RS11215;old_locus_tag=AC57_2660 NZ_JJLR01000094.1 Protein Homology CDS 26163 26996 . - 0 ID=cds-WP_001469059.1;Parent=gene-AC57_RS11215;Dbxref=GenBank:WP_001469059.1;Name=WP_001469059.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AC57_RS11215;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_001469059.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 26996 28012 . - . ID=gene-AC57_RS11210;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AC57_RS11210;old_locus_tag=AC57_2661 NZ_JJLR01000094.1 Protein Homology CDS 26996 28012 . - 0 ID=cds-WP_001405543.1;Parent=gene-AC57_RS11210;Dbxref=GenBank:WP_001405543.1;Name=WP_001405543.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311323.1;locus_tag=AC57_RS11210;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_001405543.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 28170 28961 . - . ID=gene-AC57_RS11205;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AC57_RS11205;old_locus_tag=AC57_2662 NZ_JJLR01000094.1 Protein Homology CDS 28170 28961 . - 0 ID=cds-WP_000517431.1;Parent=gene-AC57_RS11205;Dbxref=GenBank:WP_000517431.1;Name=WP_000517431.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416921.4;locus_tag=AC57_RS11205;product=SDR family oxidoreductase UcpA;protein_id=WP_000517431.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 29090 29947 . - . ID=gene-AC57_RS11200;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AC57_RS11200;old_locus_tag=AC57_2663 NZ_JJLR01000094.1 Protein Homology CDS 29090 29947 . - 0 ID=cds-WP_000966478.1;Parent=gene-AC57_RS11200;Dbxref=GenBank:WP_000966478.1;Name=WP_000966478.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416922.1;locus_tag=AC57_RS11200;product=HTH-type transcriptional regulator MurR;protein_id=WP_000966478.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 30111 31007 . + . ID=gene-AC57_RS11195;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AC57_RS11195;old_locus_tag=AC57_2664 NZ_JJLR01000094.1 Protein Homology CDS 30111 31007 . + 0 ID=cds-WP_001175611.1;Parent=gene-AC57_RS11195;Dbxref=GenBank:WP_001175611.1;Name=WP_001175611.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311326.1;locus_tag=AC57_RS11195;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_001175611.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 31011 32435 . + . ID=gene-AC57_RS11190;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AC57_RS11190;old_locus_tag=AC57_2665 NZ_JJLR01000094.1 Protein Homology CDS 31011 32435 . + 0 ID=cds-WP_001040483.1;Parent=gene-AC57_RS11190;Dbxref=GenBank:WP_001040483.1;Name=WP_001040483.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416924.1;locus_tag=AC57_RS11190;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040483.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 32440 33744 . + . ID=gene-AC57_RS11185;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AC57_RS11185;old_locus_tag=AC57_2666 NZ_JJLR01000094.1 Protein Homology CDS 32440 33744 . + 0 ID=cds-WP_001327042.1;Parent=gene-AC57_RS11185;Dbxref=GenBank:WP_001327042.1;Name=WP_001327042.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416925.2;locus_tag=AC57_RS11185;product=penicillin binding protein PBP4B;protein_id=WP_001327042.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 33984 34883 . - . ID=gene-AC57_RS11180;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AC57_RS11180;old_locus_tag=AC57_2667 NZ_JJLR01000094.1 Protein Homology CDS 33984 34883 . - 0 ID=cds-WP_000084590.1;Parent=gene-AC57_RS11180;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AC57_RS11180;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 34979 35554 . - . ID=gene-AC57_RS11175;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=AC57_RS11175;old_locus_tag=AC57_2668 NZ_JJLR01000094.1 Protein Homology CDS 34979 35554 . - 0 ID=cds-WP_000838944.1;Parent=gene-AC57_RS11175;Dbxref=GenBank:WP_000838944.1;Name=WP_000838944.1;gbkey=CDS;gene=yfeY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416927.1;locus_tag=AC57_RS11175;product=RpoE-regulated lipoprotein;protein_id=WP_000838944.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 35615 36064 . - . ID=gene-AC57_RS11170;Name=yfeZ;gbkey=Gene;gene=yfeZ;gene_biotype=protein_coding;locus_tag=AC57_RS11170;old_locus_tag=AC57_2669 NZ_JJLR01000094.1 Protein Homology CDS 35615 36064 . - 0 ID=cds-WP_001300381.1;Parent=gene-AC57_RS11170;Dbxref=GenBank:WP_001300381.1;Name=WP_001300381.1;gbkey=CDS;gene=yfeZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AC57_RS11170;product=DUF2919 domain-containing protein;protein_id=WP_001300381.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 36051 36476 . - . ID=gene-AC57_RS11165;Name=ypeA;gbkey=Gene;gene=ypeA;gene_biotype=protein_coding;locus_tag=AC57_RS11165;old_locus_tag=AC57_2670 NZ_JJLR01000094.1 Protein Homology CDS 36051 36476 . - 0 ID=cds-WP_000405996.1;Parent=gene-AC57_RS11165;Dbxref=GenBank:WP_000405996.1;Name=WP_000405996.1;Ontology_term=GO:0008080;gbkey=CDS;gene=ypeA;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416929.4;locus_tag=AC57_RS11165;product=GNAT family acetyltransferase;protein_id=WP_000405996.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 36690 37559 . + . ID=gene-AC57_RS11160;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AC57_RS11160;old_locus_tag=AC57_2671 NZ_JJLR01000094.1 Protein Homology CDS 36690 37559 . + 0 ID=cds-WP_000102886.1;Parent=gene-AC57_RS11160;Dbxref=GenBank:WP_000102886.1;Name=WP_000102886.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416930.1;locus_tag=AC57_RS11160;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102886.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 37563 38462 . + . ID=gene-AC57_RS11155;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AC57_RS11155;old_locus_tag=AC57_2672 NZ_JJLR01000094.1 Protein Homology CDS 37563 38462 . + 0 ID=cds-WP_000801365.1;Parent=gene-AC57_RS11155;Dbxref=GenBank:WP_000801365.1;Name=WP_000801365.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416931.1;locus_tag=AC57_RS11155;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_000801365.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 38468 39520 . - . ID=gene-AC57_RS11150;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AC57_RS11150;old_locus_tag=AC57_2673 NZ_JJLR01000094.1 Protein Homology CDS 38468 39520 . - 0 ID=cds-WP_000753690.1;Parent=gene-AC57_RS11150;Dbxref=GenBank:WP_000753690.1;Name=WP_000753690.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416932.1;locus_tag=AC57_RS11150;product=HTH-type transcriptional regulator EutR;protein_id=WP_000753690.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 39566 40066 . - . ID=gene-AC57_RS11145;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AC57_RS11145;old_locus_tag=AC57_2674 NZ_JJLR01000094.1 Protein Homology CDS 39566 40066 . - 0 ID=cds-WP_000606257.1;Parent=gene-AC57_RS11145;Dbxref=GenBank:WP_000606257.1;Name=WP_000606257.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416933.4;locus_tag=AC57_RS11145;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_000606257.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 40079 40738 . - . ID=gene-AC57_RS11140;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AC57_RS11140;old_locus_tag=AC57_2675 NZ_JJLR01000094.1 Protein Homology CDS 40079 40738 . - 0 ID=cds-WP_032279765.1;Parent=gene-AC57_RS11140;Dbxref=GenBank:WP_032279765.1;Name=WP_032279765.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416934.1;locus_tag=AC57_RS11140;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_032279765.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 40748 41635 . - . ID=gene-AC57_RS11135;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AC57_RS11135;old_locus_tag=AC57_2676 NZ_JJLR01000094.1 Protein Homology CDS 40748 41635 . - 0 ID=cds-WP_000372316.1;Parent=gene-AC57_RS11135;Dbxref=GenBank:WP_000372316.1;Name=WP_000372316.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AC57_RS11135;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372316.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 41656 43017 . - . ID=gene-AC57_RS11130;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=AC57_RS11130;old_locus_tag=AC57_2677 NZ_JJLR01000094.1 Protein Homology CDS 41656 43017 . - 0 ID=cds-WP_032279764.1;Parent=gene-AC57_RS11130;Dbxref=GenBank:WP_032279764.1;Name=WP_032279764.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AC57_RS11130;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_032279764.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 43029 44432 . - . ID=gene-AC57_RS11125;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=AC57_RS11125;old_locus_tag=AC57_2678 NZ_JJLR01000094.1 Protein Homology CDS 43029 44432 . - 0 ID=cds-WP_001097542.1;Parent=gene-AC57_RS11125;Dbxref=GenBank:WP_001097542.1;Name=WP_001097542.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416946.1;locus_tag=AC57_RS11125;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_001097542.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 44429 45655 . - . ID=gene-AC57_RS11120;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=AC57_RS11120;old_locus_tag=AC57_2679 NZ_JJLR01000094.1 Protein Homology CDS 44429 45655 . - 0 ID=cds-WP_000512372.1;Parent=gene-AC57_RS11120;Dbxref=GenBank:WP_000512372.1;Name=WP_000512372.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416947.1;locus_tag=AC57_RS11120;product=ethanolamine utilization protein EutH;protein_id=WP_000512372.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 45872 47059 . - . ID=gene-AC57_RS11115;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=AC57_RS11115;old_locus_tag=AC57_2680 NZ_JJLR01000094.1 Protein Homology CDS 45872 47059 . - 0 ID=cds-WP_001326575.1;Parent=gene-AC57_RS11115;Dbxref=GenBank:WP_001326575.1;Name=WP_001326575.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416948.4;locus_tag=AC57_RS11115;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_001326575.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 47049 47885 . - . ID=gene-AC57_RS11110;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=AC57_RS11110;old_locus_tag=AC57_2681 NZ_JJLR01000094.1 Protein Homology CDS 47049 47885 . - 0 ID=cds-WP_032237519.1;Parent=gene-AC57_RS11110;Dbxref=GenBank:WP_032237519.1;Name=WP_032237519.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416949.1;locus_tag=AC57_RS11110;product=ethanolamine utilization protein EutJ;protein_id=WP_032237519.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 47896 49299 . - . ID=gene-AC57_RS11105;Name=eutE;gbkey=Gene;gene=eutE;gene_biotype=protein_coding;locus_tag=AC57_RS11105;old_locus_tag=AC57_2682 NZ_JJLR01000094.1 Protein Homology CDS 47896 49299 . - 0 ID=cds-WP_001075716.1;Parent=gene-AC57_RS11105;Dbxref=GenBank:WP_001075716.1;Name=WP_001075716.1;Ontology_term=GO:0004029,GO:0008774;gbkey=CDS;gene=eutE;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA,acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416950.1;locus_tag=AC57_RS11105;product=aldehyde dehydrogenase family protein;protein_id=WP_001075716.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 49311 49598 . - . ID=gene-AC57_RS11100;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=AC57_RS11100;old_locus_tag=AC57_2683 NZ_JJLR01000094.1 Protein Homology CDS 49311 49598 . - 0 ID=cds-WP_000762196.1;Parent=gene-AC57_RS11100;Dbxref=GenBank:WP_000762196.1;Name=WP_000762196.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416951.1;locus_tag=AC57_RS11100;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_000762196.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 49705 49998 . - . ID=gene-AC57_RS11095;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=AC57_RS11095;old_locus_tag=AC57_2684 NZ_JJLR01000094.1 Protein Homology CDS 49705 49998 . - 0 ID=cds-WP_000387713.1;Parent=gene-AC57_RS11095;Dbxref=GenBank:WP_000387713.1;Name=WP_000387713.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416952.2;locus_tag=AC57_RS11095;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387713.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 50037 51053 . - . ID=gene-AC57_RS11090;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AC57_RS11090;old_locus_tag=AC57_2685 NZ_JJLR01000094.1 Protein Homology CDS 50037 51053 . - 0 ID=cds-WP_000582977.1;Parent=gene-AC57_RS11090;Dbxref=GenBank:WP_000582977.1;Name=WP_000582977.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416953.1;locus_tag=AC57_RS11090;product=phosphate acetyltransferase;protein_id=WP_000582977.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 51050 51853 . - . ID=gene-AC57_RS11085;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=AC57_RS11085;old_locus_tag=AC57_2686 NZ_JJLR01000094.1 Protein Homology CDS 51050 51853 . - 0 ID=cds-WP_000651298.1;Parent=gene-AC57_RS11085;Dbxref=GenBank:WP_000651298.1;Name=WP_000651298.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416954.1;locus_tag=AC57_RS11085;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_000651298.1;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 51850 52551 . - . ID=gene-AC57_RS11080;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=AC57_RS11080;old_locus_tag=AC57_2687 NZ_JJLR01000094.1 Protein Homology CDS 51850 52551 . - 0 ID=cds-WP_000733906.1;Parent=gene-AC57_RS11080;Dbxref=GenBank:WP_000733906.1;Name=WP_000733906.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416955.1;locus_tag=AC57_RS11080;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_000733906.1;transl_table=11 NZ_JJLR01000094.1 RefSeq pseudogene 52526 52873 . - . ID=gene-AC57_RS0124575;Name=AC57_RS0124575;end_range=52873,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124575;old_locus_tag=AC57_2688;partial=true;pseudo=true NZ_JJLR01000094.1 Protein Homology CDS 52526 52873 . - 0 ID=cds-AC57_RS0124575;Parent=gene-AC57_RS0124575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006576,GO:0005524;end_range=52873,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biogenic amine metabolic process|0006576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311350.1;locus_tag=AC57_RS0124575;partial=true;product=EutP/PduV family microcompartment system protein;pseudo=true;transl_table=11 NZ_JJLR01000094.1 RefSeq gene 52891 53119 . - . ID=gene-AC57_RS11075;Name=AC57_RS11075;end_range=53119,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS11075;old_locus_tag=AC57_2689;partial=true NZ_JJLR01000094.1 Protein Homology CDS 52891 53119 . - 1 ID=cds-WP_000385869.1-2;Parent=gene-AC57_RS11075;Dbxref=GenBank:WP_000385869.1;Name=WP_000385869.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=53119,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS11075;partial=true;product=IS1 family transposase;protein_id=WP_000385869.1;transl_table=11 ##sequence-region NZ_JJLR01000095.1 1 27281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000095.1 RefSeq region 1 27281 . + . ID=NZ_JJLR01000095.1:1..27281;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000095.1 RefSeq gene 1 264 . - . ID=gene-AC57_RS11070;Name=AC57_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS11070;old_locus_tag=AC57_2690;partial=true;start_range=.,1 NZ_JJLR01000095.1 Protein Homology CDS 1 264 . - 0 ID=cds-WP_001508402.1-2;Parent=gene-AC57_RS11070;Dbxref=GenBank:WP_001508402.1;Name=WP_001508402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS11070;partial=true;product=IS1-like element transposase;protein_id=WP_001508402.1;start_range=.,1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 565 2844 . - . ID=gene-AC57_RS11065;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AC57_RS11065;old_locus_tag=AC57_2691 NZ_JJLR01000095.1 Protein Homology CDS 565 2844 . - 0 ID=cds-WP_000342644.1;Parent=gene-AC57_RS11065;Dbxref=GenBank:WP_000342644.1;Name=WP_000342644.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416958.1;locus_tag=AC57_RS11065;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342644.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 3133 4083 . + . ID=gene-AC57_RS11060;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AC57_RS11060;old_locus_tag=AC57_2692 NZ_JJLR01000095.1 Protein Homology CDS 3133 4083 . + 0 ID=cds-WP_001003709.1;Parent=gene-AC57_RS11060;Dbxref=GenBank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AC57_RS11060;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 4103 6106 . + . ID=gene-AC57_RS11055;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AC57_RS11055;old_locus_tag=AC57_2693 NZ_JJLR01000095.1 Protein Homology CDS 4103 6106 . + 0 ID=cds-WP_023281409.1;Parent=gene-AC57_RS11055;Dbxref=GenBank:WP_023281409.1;Name=WP_023281409.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=AC57_RS11055;product=transketolase;protein_id=WP_023281409.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 6230 7273 . - . ID=gene-AC57_RS11050;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AC57_RS11050;old_locus_tag=AC57_2695 NZ_JJLR01000095.1 Protein Homology CDS 6230 7273 . - 0 ID=cds-WP_032279657.1;Parent=gene-AC57_RS11050;Dbxref=GenBank:WP_032279657.1;Name=WP_032279657.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708305.2;locus_tag=AC57_RS11050;product=DUF1176 domain-containing protein;protein_id=WP_032279657.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 7399 7974 . - . ID=gene-AC57_RS11045;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AC57_RS11045;old_locus_tag=AC57_2696 NZ_JJLR01000095.1 Protein Homology CDS 7399 7974 . - 0 ID=cds-WP_000193711.1;Parent=gene-AC57_RS11045;Dbxref=GenBank:WP_000193711.1;Name=WP_000193711.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311356.1;locus_tag=AC57_RS11045;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_000193711.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 8042 10021 . - . ID=gene-AC57_RS11040;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AC57_RS11040;old_locus_tag=AC57_2697 NZ_JJLR01000095.1 Protein Homology CDS 8042 10021 . - 0 ID=cds-WP_032237776.1;Parent=gene-AC57_RS11040;Dbxref=GenBank:WP_032237776.1;Name=WP_032237776.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416963.1;locus_tag=AC57_RS11040;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_032237776.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 10227 11927 . + . ID=gene-AC57_RS11035;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AC57_RS11035;old_locus_tag=AC57_2698 NZ_JJLR01000095.1 Protein Homology CDS 10227 11927 . + 0 ID=cds-WP_001300881.1;Parent=gene-AC57_RS11035;Dbxref=GenBank:WP_001300881.1;Name=WP_001300881.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AC57_RS11035;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_001300881.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 12091 15204 . + . ID=gene-AC57_RS11030;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AC57_RS11030;old_locus_tag=AC57_2699 NZ_JJLR01000095.1 Protein Homology CDS 12091 15204 . + 0 ID=cds-WP_001273139.1;Parent=gene-AC57_RS11030;Dbxref=GenBank:WP_001273139.1;Name=WP_001273139.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AC57_RS11030;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273139.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 15303 15362 . - . ID=gene-AC57_RS29160;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AC57_RS29160 NZ_JJLR01000095.1 Protein Homology CDS 15303 15362 . - 0 ID=cds-WP_001386977.1;Parent=gene-AC57_RS29160;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AC57_RS29160;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 15743 16099 . + . ID=gene-AC57_RS11025;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AC57_RS11025;old_locus_tag=AC57_2700 NZ_JJLR01000095.1 Protein Homology CDS 15743 16099 . + 0 ID=cds-WP_000258247.1;Parent=gene-AC57_RS11025;Dbxref=GenBank:WP_000258247.1;Name=WP_000258247.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708309.1;locus_tag=AC57_RS11025;product=ArsC family reductase;protein_id=WP_000258247.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 16103 17230 . + . ID=gene-AC57_RS11020;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AC57_RS11020;old_locus_tag=AC57_2701 NZ_JJLR01000095.1 Protein Homology CDS 16103 17230 . + 0 ID=cds-WP_001277801.1;Parent=gene-AC57_RS11020;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AC57_RS11020;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 17258 17458 . + . ID=gene-AC57_RS11015;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AC57_RS11015;old_locus_tag=AC57_2702 NZ_JJLR01000095.1 Protein Homology CDS 17258 17458 . + 0 ID=cds-WP_000383836.1;Parent=gene-AC57_RS11015;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AC57_RS11015;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 17539 18237 . - . ID=gene-AC57_RS11010;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AC57_RS11010;old_locus_tag=AC57_2703 NZ_JJLR01000095.1 Protein Homology CDS 17539 18237 . - 0 ID=cds-WP_000679812.1;Parent=gene-AC57_RS11010;Dbxref=GenBank:WP_000679812.1;Name=WP_000679812.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311362.2;locus_tag=AC57_RS11010;product=esterase;protein_id=WP_000679812.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 18311 20326 . - . ID=gene-AC57_RS11005;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AC57_RS11005;old_locus_tag=AC57_2704 NZ_JJLR01000095.1 Protein Homology CDS 18311 20326 . - 0 ID=cds-WP_032285714.1;Parent=gene-AC57_RS11005;Dbxref=GenBank:WP_032285714.1;Name=WP_032285714.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708313.1;locus_tag=AC57_RS11005;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_032285714.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 20341 21204 . - . ID=gene-AC57_RS11000;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AC57_RS11000;old_locus_tag=AC57_2705 NZ_JJLR01000095.1 Protein Homology CDS 20341 21204 . - 0 ID=cds-WP_001267498.1;Parent=gene-AC57_RS11000;Dbxref=GenBank:WP_001267498.1;Name=WP_001267498.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AC57_RS11000;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_001267498.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 21351 21749 . - . ID=gene-AC57_RS0124600;Name=vapC;gbkey=Gene;gene=vapC;gene_biotype=protein_coding;locus_tag=AC57_RS0124600 NZ_JJLR01000095.1 Protein Homology CDS 21351 21749 . - 0 ID=cds-WP_032237774.1;Parent=gene-AC57_RS0124600;Dbxref=GenBank:WP_032237774.1;Name=WP_032237774.1;Ontology_term=GO:0000287,GO:0004540;gbkey=CDS;gene=vapC;go_function=magnesium ion binding|0000287||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490590.1;locus_tag=AC57_RS0124600;product=type II toxin-antitoxin system tRNA(fMet)-specific endonuclease VapC;protein_id=WP_032237774.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 21749 21976 . - . ID=gene-AC57_RS10995;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=AC57_RS10995;old_locus_tag=AC57_2706 NZ_JJLR01000095.1 Protein Homology CDS 21749 21976 . - 0 ID=cds-WP_000450524.1;Parent=gene-AC57_RS10995;Dbxref=GenBank:WP_000450524.1;Name=WP_000450524.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858379.1;locus_tag=AC57_RS10995;product=toxin-antitoxin system antitoxin VapB;protein_id=WP_000450524.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 22131 22844 . - . ID=gene-AC57_RS10990;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AC57_RS10990;old_locus_tag=AC57_2707 NZ_JJLR01000095.1 Protein Homology CDS 22131 22844 . - 0 ID=cds-WP_001295467.1;Parent=gene-AC57_RS10990;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AC57_RS10990;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 23057 24091 . - . ID=gene-AC57_RS10985;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AC57_RS10985;old_locus_tag=AC57_2708 NZ_JJLR01000095.1 Protein Homology CDS 23057 24091 . - 0 ID=cds-WP_023281413.1;Parent=gene-AC57_RS10985;Dbxref=GenBank:WP_023281413.1;Name=WP_023281413.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AC57_RS10985;product=outer membrane protein assembly factor BamC;protein_id=WP_023281413.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 24108 24986 . - . ID=gene-AC57_RS10980;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AC57_RS10980;old_locus_tag=AC57_2709 NZ_JJLR01000095.1 Protein Homology CDS 24108 24986 . - 0 ID=cds-WP_001311023.1;Parent=gene-AC57_RS10980;Dbxref=GenBank:WP_001311023.1;Name=WP_001311023.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AC57_RS10980;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001311023.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 25132 25704 . + . ID=gene-AC57_RS10975;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AC57_RS10975;old_locus_tag=AC57_2710 NZ_JJLR01000095.1 Protein Homology CDS 25132 25704 . + 0 ID=cds-WP_000176187.1;Parent=gene-AC57_RS10975;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AC57_RS10975;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 25704 26174 . + . ID=gene-AC57_RS10970;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AC57_RS10970;old_locus_tag=AC57_2711 NZ_JJLR01000095.1 Protein Homology CDS 25704 26174 . + 0 ID=cds-WP_001068682.1;Parent=gene-AC57_RS10970;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AC57_RS10970;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 26427 27029 . + . ID=gene-AC57_RS10965;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AC57_RS10965;old_locus_tag=AC57_2712 NZ_JJLR01000095.1 Protein Homology CDS 26427 27029 . + 0 ID=cds-WP_001300787.1;Parent=gene-AC57_RS10965;Dbxref=GenBank:WP_001300787.1;Name=WP_001300787.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300787.1;locus_tag=AC57_RS10965;product=hydrogenase 4 subunit HyfA;protein_id=WP_001300787.1;transl_table=11 NZ_JJLR01000095.1 RefSeq gene 27189 27281 . - . ID=gene-AC57_RS30785;Name=AC57_RS30785;end_range=27281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30785;partial=true NZ_JJLR01000095.1 Protein Homology CDS 27189 27281 . - 0 ID=cds-WP_024169737.1;Parent=gene-AC57_RS30785;Dbxref=GenBank:WP_024169737.1;Name=WP_024169737.1;end_range=27281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30785;partial=true;product=hypothetical protein;protein_id=WP_024169737.1;transl_table=11 ##sequence-region NZ_JJLR01000096.1 1 7053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000096.1 RefSeq region 1 7053 . + . ID=NZ_JJLR01000096.1:1..7053;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000096.1 RefSeq pseudogene 1 536 . - . ID=gene-AC57_RS10960;Name=AC57_RS10960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS10960;old_locus_tag=AC57_2713;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000096.1 Protein Homology CDS 1 536 . - 0 ID=cds-AC57_RS10960;Parent=gene-AC57_RS10960;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS10960;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000096.1 RefSeq gene 628 2646 . + . ID=gene-AC57_RS10955;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=AC57_RS10955;old_locus_tag=AC57_2714 NZ_JJLR01000096.1 Protein Homology CDS 628 2646 . + 0 ID=cds-WP_032237076.1;Parent=gene-AC57_RS10955;Dbxref=GenBank:WP_032237076.1;Name=WP_032237076.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311371.1;locus_tag=AC57_RS10955;product=hydrogenase 4 subunit B;protein_id=WP_032237076.1;transl_table=11 NZ_JJLR01000096.1 RefSeq gene 2657 3604 . + . ID=gene-AC57_RS10950;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AC57_RS10950;old_locus_tag=AC57_2715 NZ_JJLR01000096.1 Protein Homology CDS 2657 3604 . + 0 ID=cds-WP_032237075.1;Parent=gene-AC57_RS10950;Dbxref=GenBank:WP_032237075.1;Name=WP_032237075.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708321.1;locus_tag=AC57_RS10950;product=hydrogenase 4 subunit HyfC;protein_id=WP_032237075.1;transl_table=11 NZ_JJLR01000096.1 RefSeq gene 3621 5060 . + . ID=gene-AC57_RS10945;Name=hyfD;gbkey=Gene;gene=hyfD;gene_biotype=protein_coding;locus_tag=AC57_RS10945;old_locus_tag=AC57_2716 NZ_JJLR01000096.1 Protein Homology CDS 3621 5060 . + 0 ID=cds-WP_000429104.1;Parent=gene-AC57_RS10945;Dbxref=GenBank:WP_000429104.1;Name=WP_000429104.1;gbkey=CDS;gene=hyfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AC57_RS10945;product=hydrogenase 4 subunit HyfD;protein_id=WP_000429104.1;transl_table=11 NZ_JJLR01000096.1 RefSeq gene 5072 5722 . + . ID=gene-AC57_RS10940;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AC57_RS10940;old_locus_tag=AC57_2717 NZ_JJLR01000096.1 Protein Homology CDS 5072 5722 . + 0 ID=cds-WP_000148113.1;Parent=gene-AC57_RS10940;Dbxref=GenBank:WP_000148113.1;Name=WP_000148113.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AC57_RS10940;product=hydrogenase 4 membrane subunit;protein_id=WP_000148113.1;transl_table=11 NZ_JJLR01000096.1 RefSeq gene 5727 7053 . + . ID=gene-AC57_RS10935;Name=hyfF;end_range=7053,.;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AC57_RS10935;old_locus_tag=AC57_2718;partial=true NZ_JJLR01000096.1 Protein Homology CDS 5727 7053 . + 0 ID=cds-WP_032285715.1;Parent=gene-AC57_RS10935;Dbxref=GenBank:WP_032285715.1;Name=WP_032285715.1;end_range=7053,.;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708324.1;locus_tag=AC57_RS10935;partial=true;product=hydrogenase 4 subunit F;protein_id=WP_032285715.1;transl_table=11 ##sequence-region NZ_JJLR01000097.1 1 22731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000097.1 RefSeq region 1 22731 . + . ID=NZ_JJLR01000097.1:1..22731;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000097.1 RefSeq gene 1 526 . + . ID=gene-AC57_RS10930;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AC57_RS10930;old_locus_tag=AC57_2719;partial=true;start_range=.,1 NZ_JJLR01000097.1 Protein Homology CDS 1 526 . + 1 ID=cds-WP_032285716.1;Parent=gene-AC57_RS10930;Dbxref=GenBank:WP_032285716.1;Name=WP_032285716.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AC57_RS10930;partial=true;product=hydrogenase 4 membrane subunit;protein_id=WP_032285716.1;start_range=.,1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 531 2111 . + . ID=gene-AC57_RS10925;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AC57_RS10925;old_locus_tag=AC57_2720 NZ_JJLR01000097.1 Protein Homology CDS 531 2111 . + 0 ID=cds-WP_032246215.1;Parent=gene-AC57_RS10925;Dbxref=GenBank:WP_032246215.1;Name=WP_032246215.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708324.1;locus_tag=AC57_RS10925;product=hydrogenase 4 subunit F;protein_id=WP_032246215.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 2101 3816 . + . ID=gene-AC57_RS10920;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AC57_RS10920;old_locus_tag=AC57_2721 NZ_JJLR01000097.1 Protein Homology CDS 2101 3816 . + 0 ID=cds-WP_032279661.1;Parent=gene-AC57_RS10920;Dbxref=GenBank:WP_032279661.1;Name=WP_032279661.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AC57_RS10920;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_032279661.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 3826 4371 . + . ID=gene-AC57_RS10915;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AC57_RS10915;old_locus_tag=AC57_2722 NZ_JJLR01000097.1 Protein Homology CDS 3826 4371 . + 0 ID=cds-WP_001603182.1;Parent=gene-AC57_RS10915;Dbxref=GenBank:WP_001603182.1;Name=WP_001603182.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311377.1;locus_tag=AC57_RS10915;product=hydrogenase 4 subunit H;protein_id=WP_001603182.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 4368 5126 . + . ID=gene-AC57_RS10910;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AC57_RS10910;old_locus_tag=AC57_2723 NZ_JJLR01000097.1 Protein Homology CDS 4368 5126 . + 0 ID=cds-WP_032279662.1;Parent=gene-AC57_RS10910;Dbxref=GenBank:WP_032279662.1;Name=WP_032279662.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416984.1;locus_tag=AC57_RS10910;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_032279662.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 5119 5532 . + . ID=gene-AC57_RS10905;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AC57_RS10905;old_locus_tag=AC57_2724 NZ_JJLR01000097.1 Protein Homology CDS 5119 5532 . + 0 ID=cds-WP_001344401.1;Parent=gene-AC57_RS10905;Dbxref=GenBank:WP_001344401.1;Name=WP_001344401.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001688773.1;locus_tag=AC57_RS10905;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_001344401.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 5562 7574 . + . ID=gene-AC57_RS0124610;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AC57_RS0124610;old_locus_tag=AC57_2725 NZ_JJLR01000097.1 Protein Homology CDS 5562 7574 . + 0 ID=cds-WP_032285717.1;Parent=gene-AC57_RS0124610;Dbxref=GenBank:WP_032285717.1;Name=WP_032285717.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416986.4;locus_tag=AC57_RS0124610;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_032285717.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 7596 8444 . + . ID=gene-AC57_RS10900;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=AC57_RS10900;old_locus_tag=AC57_2726 NZ_JJLR01000097.1 Protein Homology CDS 7596 8444 . + 0 ID=cds-WP_001244735.1;Parent=gene-AC57_RS10900;Dbxref=GenBank:WP_001244735.1;Name=WP_001244735.1;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=AC57_RS10900;product=formate transporter FocB;protein_id=WP_001244735.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 8482 9543 . - . ID=gene-AC57_RS10895;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AC57_RS10895;old_locus_tag=AC57_2727 NZ_JJLR01000097.1 Protein Homology CDS 8482 9543 . - 0 ID=cds-WP_000892044.1;Parent=gene-AC57_RS10895;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AC57_RS10895;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 9756 11219 . + . ID=gene-AC57_RS10890;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AC57_RS10890;old_locus_tag=AC57_2728 NZ_JJLR01000097.1 Protein Homology CDS 9756 11219 . + 0 ID=cds-WP_000489667.1;Parent=gene-AC57_RS10890;Dbxref=GenBank:WP_000489667.1;Name=WP_000489667.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AC57_RS10890;product=beta-barrel assembly-enhancing protease;protein_id=WP_000489667.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 11240 11599 . + . ID=gene-AC57_RS10885;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC57_RS10885;old_locus_tag=AC57_2729 NZ_JJLR01000097.1 Protein Homology CDS 11240 11599 . + 0 ID=cds-WP_000166449.1;Parent=gene-AC57_RS10885;Dbxref=GenBank:WP_000166449.1;Name=WP_000166449.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=AC57_RS10885;product=arsenate reductase (glutaredoxin);protein_id=WP_000166449.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 11737 12438 . - . ID=gene-AC57_RS10880;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AC57_RS10880;old_locus_tag=AC57_2730 NZ_JJLR01000097.1 Protein Homology CDS 11737 12438 . - 0 ID=cds-WP_001307333.1;Parent=gene-AC57_RS10880;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AC57_RS10880;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 12533 13822 . - . ID=gene-AC57_RS10875;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AC57_RS10875;old_locus_tag=AC57_2731 NZ_JJLR01000097.1 Protein Homology CDS 12533 13822 . - 0 ID=cds-WP_000198328.1;Parent=gene-AC57_RS10875;Dbxref=GenBank:WP_000198328.1;Name=WP_000198328.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AC57_RS10875;product=uracil permease;protein_id=WP_000198328.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 13908 14534 . - . ID=gene-AC57_RS10870;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AC57_RS10870;old_locus_tag=AC57_2732 NZ_JJLR01000097.1 Protein Homology CDS 13908 14534 . - 0 ID=cds-WP_001295473.1;Parent=gene-AC57_RS10870;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AC57_RS10870;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 14859 15896 . + . ID=gene-AC57_RS10865;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AC57_RS10865;old_locus_tag=AC57_2734 NZ_JJLR01000097.1 Protein Homology CDS 14859 15896 . + 0 ID=cds-WP_001295474.1;Parent=gene-AC57_RS10865;Dbxref=GenBank:WP_001295474.1;Name=WP_001295474.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311388.1;locus_tag=AC57_RS10865;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001295474.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 15896 16534 . + . ID=gene-AC57_RS10860;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AC57_RS10860;old_locus_tag=AC57_2735 NZ_JJLR01000097.1 Protein Homology CDS 15896 16534 . + 0 ID=cds-WP_001028618.1;Parent=gene-AC57_RS10860;Dbxref=GenBank:WP_001028618.1;Name=WP_001028618.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311389.1;locus_tag=AC57_RS10860;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028618.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 16706 18772 . + . ID=gene-AC57_RS10855;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AC57_RS10855;old_locus_tag=AC57_2736 NZ_JJLR01000097.1 Protein Homology CDS 16706 18772 . + 0 ID=cds-WP_001394601.1;Parent=gene-AC57_RS10855;Dbxref=GenBank:WP_001394601.1;Name=WP_001394601.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AC57_RS10855;product=polyphosphate kinase 1;protein_id=WP_001394601.1;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 18777 20318 . + . ID=gene-AC57_RS10850;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AC57_RS10850;old_locus_tag=AC57_2737 NZ_JJLR01000097.1 Protein Homology CDS 18777 20318 . + 0 ID=cds-WP_001121363.1;Parent=gene-AC57_RS10850;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AC57_RS10850;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JJLR01000097.1 RefSeq pseudogene 20357 22471 . - . ID=gene-AC57_RS10845;Name=pdeF;end_range=22471,.;gbkey=Gene;gene=pdeF;gene_biotype=pseudogene;locus_tag=AC57_RS10845;old_locus_tag=AC57_2738;partial=true;pseudo=true NZ_JJLR01000097.1 Protein Homology CDS 20357 22471 . - 0 ID=cds-AC57_RS10845;Parent=gene-AC57_RS10845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=22471,.;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=AC57_RS10845;partial=true;product=cyclic-guanylate-specific phosphodiesterase PdeF;pseudo=true;transl_table=11 NZ_JJLR01000097.1 RefSeq gene 22482 22731 . - . ID=gene-AC57_RS10840;Name=AC57_RS10840;end_range=22731,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10840;old_locus_tag=AC57_2739;partial=true NZ_JJLR01000097.1 Protein Homology CDS 22482 22731 . - 1 ID=cds-WP_000674744.1-7;Parent=gene-AC57_RS10840;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=22731,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS10840;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;transl_table=11 ##sequence-region NZ_JJLR01000098.1 1 5587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000098.1 RefSeq region 1 5587 . + . ID=NZ_JJLR01000098.1:1..5587;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000098.1 RefSeq gene 1 277 . + . ID=gene-AC57_RS10835;Name=AC57_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10835;old_locus_tag=AC57_2740;partial=true;start_range=.,1 NZ_JJLR01000098.1 Protein Homology CDS 1 277 . + 1 ID=cds-WP_000364013.1-3;Parent=gene-AC57_RS10835;Dbxref=GenBank:WP_000364013.1;Name=WP_000364013.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS10835;partial=true;product=IS1 family transposase;protein_id=WP_000364013.1;start_range=.,1;transl_table=11 NZ_JJLR01000098.1 RefSeq gene 271 1674 . - . ID=gene-AC57_RS10830;Name=trbL;gbkey=Gene;gene=trbL;gene_biotype=protein_coding;locus_tag=AC57_RS10830;old_locus_tag=AC57_2741 NZ_JJLR01000098.1 Protein Homology CDS 271 1674 . - 0 ID=cds-WP_032280101.1;Parent=gene-AC57_RS10830;Dbxref=GenBank:WP_032280101.1;Name=WP_032280101.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbL;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005975771.1;locus_tag=AC57_RS10830;product=P-type conjugative transfer protein TrbL;protein_id=WP_032280101.1;transl_table=11 NZ_JJLR01000098.1 RefSeq gene 1677 1850 . - . ID=gene-AC57_RS30300;Name=AC57_RS30300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30300;old_locus_tag=AC57_2742 NZ_JJLR01000098.1 Protein Homology CDS 1677 1850 . - 0 ID=cds-WP_164838718.1;Parent=gene-AC57_RS30300;Dbxref=GenBank:WP_164838718.1;Name=WP_164838718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965741.1;locus_tag=AC57_RS30300;product=hypothetical protein;protein_id=WP_164838718.1;transl_table=11 NZ_JJLR01000098.1 RefSeq gene 1862 2656 . - . ID=gene-AC57_RS10825;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AC57_RS10825;old_locus_tag=AC57_2743 NZ_JJLR01000098.1 Protein Homology CDS 1862 2656 . - 0 ID=cds-WP_001575472.1;Parent=gene-AC57_RS10825;Dbxref=GenBank:WP_001575472.1;Name=WP_001575472.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724243.1;locus_tag=AC57_RS10825;product=P-type conjugative transfer protein TrbJ;protein_id=WP_001575472.1;transl_table=11 NZ_JJLR01000098.1 RefSeq gene 2738 3091 . - . ID=gene-AC57_RS10820;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AC57_RS10820;old_locus_tag=AC57_2744 NZ_JJLR01000098.1 Protein Homology CDS 2738 3091 . - 0 ID=cds-WP_001575471.1;Parent=gene-AC57_RS10820;Dbxref=GenBank:WP_001575471.1;Name=WP_001575471.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575471.1;locus_tag=AC57_RS10820;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_001575471.1;transl_table=11 NZ_JJLR01000098.1 RefSeq gene 3373 3654 . - . ID=gene-AC57_RS0124615;Name=AC57_RS0124615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124615 NZ_JJLR01000098.1 Protein Homology CDS 3373 3654 . - 0 ID=cds-WP_000843928.1;Parent=gene-AC57_RS0124615;Dbxref=GenBank:WP_000843928.1;Name=WP_000843928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020244701.1;locus_tag=AC57_RS0124615;product=hypothetical protein;protein_id=WP_000843928.1;transl_table=11 NZ_JJLR01000098.1 RefSeq gene 4360 4617 . + . ID=gene-AC57_RS0124620;Name=AC57_RS0124620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124620;old_locus_tag=AC57_2745 NZ_JJLR01000098.1 Protein Homology CDS 4360 4617 . + 0 ID=cds-WP_001575470.1;Parent=gene-AC57_RS0124620;Dbxref=GenBank:WP_001575470.1;Name=WP_001575470.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965745.1;locus_tag=AC57_RS0124620;product=HigA family addiction module antitoxin;protein_id=WP_001575470.1;transl_table=11 NZ_JJLR01000098.1 RefSeq gene 5316 5587 . - . ID=gene-AC57_RS10815;Name=AC57_RS10815;end_range=5587,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10815;old_locus_tag=AC57_2746;partial=true NZ_JJLR01000098.1 Protein Homology CDS 5316 5587 . - 2 ID=cds-WP_000317619.1-2;Parent=gene-AC57_RS10815;Dbxref=GenBank:WP_000317619.1;Name=WP_000317619.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=5587,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS10815;partial=true;product=IS1 family transposase;protein_id=WP_000317619.1;transl_table=11 ##sequence-region NZ_JJLR01000099.1 1 11934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000099.1 RefSeq region 1 11934 . + . ID=NZ_JJLR01000099.1:1..11934;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000099.1 RefSeq pseudogene 1 195 . + . ID=gene-AC57_RS10810;Name=AC57_RS10810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS10810;old_locus_tag=AC57_2747;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000099.1 Protein Homology CDS 1 195 . + 0 ID=cds-AC57_RS10810;Parent=gene-AC57_RS10810;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS10810;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000099.1 RefSeq pseudogene 276 764 . + . ID=gene-AC57_RS0124625;Name=AC57_RS0124625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124625;partial=true;pseudo=true;start_range=.,276 NZ_JJLR01000099.1 Protein Homology CDS 276 764 . + 0 ID=cds-AC57_RS0124625;Parent=gene-AC57_RS0124625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611482.1;locus_tag=AC57_RS0124625;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,276;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 847 1104 . + . ID=gene-AC57_RS29890;Name=AC57_RS29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29890;old_locus_tag=AC57_2748 NZ_JJLR01000099.1 GeneMarkS-2+ CDS 847 1104 . + 0 ID=cds-WP_000177057.1;Parent=gene-AC57_RS29890;Dbxref=GenBank:WP_000177057.1;Name=WP_000177057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS29890;product=hypothetical protein;protein_id=WP_000177057.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 1661 2428 . - . ID=gene-AC57_RS0124630;Name=fecE;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=AC57_RS0124630;old_locus_tag=AC57_2749 NZ_JJLR01000099.1 Protein Homology CDS 1661 2428 . - 0 ID=cds-WP_000175457.1;Parent=gene-AC57_RS0124630;Dbxref=GenBank:WP_000175457.1;Name=WP_000175457.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fecE;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418707.1;locus_tag=AC57_RS0124630;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;protein_id=WP_000175457.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 2429 3385 . - . ID=gene-AC57_RS10800;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=AC57_RS10800;old_locus_tag=AC57_2751 NZ_JJLR01000099.1 Protein Homology CDS 2429 3385 . - 0 ID=cds-WP_000684856.1;Parent=gene-AC57_RS10800;Dbxref=GenBank:WP_000684856.1;Name=WP_000684856.1;gbkey=CDS;gene=fecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418708.1;locus_tag=AC57_RS10800;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;protein_id=WP_000684856.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 3382 4380 . - . ID=gene-AC57_RS10795;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=AC57_RS10795;old_locus_tag=AC57_2752 NZ_JJLR01000099.1 Protein Homology CDS 3382 4380 . - 0 ID=cds-WP_000125187.1;Parent=gene-AC57_RS10795;Dbxref=GenBank:WP_000125187.1;Name=WP_000125187.1;gbkey=CDS;gene=fecC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418709.1;locus_tag=AC57_RS10795;product=iron-dicitrate ABC transporter permease FecC;protein_id=WP_000125187.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 4377 5279 . - . ID=gene-AC57_RS10790;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=AC57_RS10790;old_locus_tag=AC57_2753 NZ_JJLR01000099.1 Protein Homology CDS 4377 5279 . - 0 ID=cds-WP_000879160.1;Parent=gene-AC57_RS10790;Dbxref=GenBank:WP_000879160.1;Name=WP_000879160.1;gbkey=CDS;gene=fecB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418710.4;locus_tag=AC57_RS10790;product=Fe(3+) dicitrate ABC transporter substrate-binding protein FecB;protein_id=WP_000879160.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 5324 7648 . - . ID=gene-AC57_RS10785;Name=fecA;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=AC57_RS10785;old_locus_tag=AC57_2754 NZ_JJLR01000099.1 Protein Homology CDS 5324 7648 . - 0 ID=cds-WP_001541949.1;Parent=gene-AC57_RS10785;Dbxref=GenBank:WP_001541949.1;Name=WP_001541949.1;gbkey=CDS;gene=fecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=AC57_RS10785;product=TonB-dependent Fe(3+) dicitrate receptor FecA;protein_id=WP_001541949.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 7735 8688 . - . ID=gene-AC57_RS10780;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=protein_coding;locus_tag=AC57_RS10780;old_locus_tag=AC57_2755 NZ_JJLR01000099.1 Protein Homology CDS 7735 8688 . - 0 ID=cds-WP_001541950.1;Parent=gene-AC57_RS10780;Dbxref=GenBank:WP_001541950.1;Name=WP_001541950.1;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=AC57_RS10780;product=ferric citrate uptake sigma factor regulator FecR;protein_id=WP_001541950.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 8685 9206 . - . ID=gene-AC57_RS10775;Name=fecI;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=AC57_RS10775;old_locus_tag=AC57_2756 NZ_JJLR01000099.1 Protein Homology CDS 8685 9206 . - 0 ID=cds-WP_001541951.1;Parent=gene-AC57_RS10775;Dbxref=GenBank:WP_001541951.1;Name=WP_001541951.1;gbkey=CDS;gene=fecI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=AC57_RS10775;product=RNA polymerase sigma factor FecI;protein_id=WP_001541951.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 9343 9411 . + . ID=gene-AC57_RS30530;Name=ykiE;gbkey=Gene;gene=ykiE;gene_biotype=protein_coding;locus_tag=AC57_RS30530 NZ_JJLR01000099.1 Protein Homology CDS 9343 9411 . + 0 ID=cds-WP_211180522.1;Parent=gene-AC57_RS30530;Dbxref=GenBank:WP_211180522.1;Name=WP_211180522.1;gbkey=CDS;gene=ykiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051215.1;locus_tag=AC57_RS30530;product=protein YkiE;protein_id=WP_211180522.1;transl_table=11 NZ_JJLR01000099.1 RefSeq pseudogene 9498 10195 . + . ID=gene-AC57_RS26215;Name=AC57_RS26215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26215;pseudo=true NZ_JJLR01000099.1 Protein Homology CDS 9498 10195 . + 0 ID=cds-AC57_RS26215;Parent=gene-AC57_RS26215;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC57_RS26215;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000099.1 RefSeq pseudogene 10210 10284 . + . ID=gene-AC57_RS31260;Name=AC57_RS31260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31260;partial=true;pseudo=true;start_range=.,10210 NZ_JJLR01000099.1 Protein Homology CDS 10210 10284 . + 0 ID=cds-AC57_RS31260;Parent=gene-AC57_RS31260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398269.1;locus_tag=AC57_RS31260;partial=true;product=phosphoethanolamine transferase;pseudo=true;start_range=.,10210;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 10381 11643 . - . ID=gene-AC57_RS10770;Name=AC57_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10770;old_locus_tag=AC57_2759 NZ_JJLR01000099.1 Protein Homology CDS 10381 11643 . - 0 ID=cds-WP_001218861.1-2;Parent=gene-AC57_RS10770;Dbxref=GenBank:WP_001218861.1;Name=WP_001218861.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=AC57_RS10770;product=tyrosine-type recombinase/integrase;protein_id=WP_001218861.1;transl_table=11 NZ_JJLR01000099.1 RefSeq gene 11841 11916 . - . ID=gene-AC57_RS10765;Name=AC57_RS10765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS10765;old_locus_tag=AC57_2760 NZ_JJLR01000099.1 tRNAscan-SE tRNA 11841 11916 . - . ID=rna-AC57_RS10765;Parent=gene-AC57_RS10765;anticodon=(pos:complement(11881..11883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10765;product=tRNA-Phe NZ_JJLR01000099.1 tRNAscan-SE exon 11841 11916 . - . ID=exon-AC57_RS10765-1;Parent=rna-AC57_RS10765;anticodon=(pos:complement(11881..11883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10765;product=tRNA-Phe ##sequence-region NZ_JJLR01000100.1 1 3094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000100.1 RefSeq region 1 3094 . + . ID=NZ_JJLR01000100.1:1..3094;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000100.1 RefSeq pseudogene 1 358 . + . ID=gene-AC57_RS10760;Name=AC57_RS10760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS10760;old_locus_tag=AC57_2761;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000100.1 Protein Homology CDS 1 358 . + 1 ID=cds-AC57_RS10760;Parent=gene-AC57_RS10760;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS10760;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000100.1 RefSeq pseudogene 374 559 . + . ID=gene-AC57_RS27470;Name=AC57_RS27470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27470;partial=true;pseudo=true;start_range=.,374 NZ_JJLR01000100.1 Protein Homology CDS 374 559 . + 0 ID=cds-AC57_RS27470;Parent=gene-AC57_RS27470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858370.1;locus_tag=AC57_RS27470;partial=true;product=DUF535 family protein;pseudo=true;start_range=.,374;transl_table=11 NZ_JJLR01000100.1 RefSeq gene 624 1568 . + . ID=gene-AC57_RS10755;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AC57_RS10755;old_locus_tag=AC57_2762 NZ_JJLR01000100.1 Protein Homology CDS 624 1568 . + 0 ID=cds-WP_032237807.1;Parent=gene-AC57_RS10755;Dbxref=GenBank:WP_032237807.1;Name=WP_032237807.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858371.1;locus_tag=AC57_RS10755;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_032237807.1;transl_table=11 NZ_JJLR01000100.1 RefSeq pseudogene 1749 2009 . + . ID=gene-AC57_RS10750;Name=AC57_RS10750;end_range=2009,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS10750;old_locus_tag=AC57_2763;partial=true;pseudo=true NZ_JJLR01000100.1 Protein Homology CDS 1749 2009 . + 0 ID=cds-AC57_RS10750;Parent=gene-AC57_RS10750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2009,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611998.1;locus_tag=AC57_RS10750;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLR01000100.1 RefSeq pseudogene 2019 2339 . - . ID=gene-AC57_RS0124640;Name=AC57_RS0124640;end_range=2339,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124640;partial=true;pseudo=true NZ_JJLR01000100.1 Protein Homology CDS 2019 2339 . - 0 ID=cds-AC57_RS0124640;Parent=gene-AC57_RS0124640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=2339,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AC57_RS0124640;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000100.1 RefSeq gene 2426 2860 . + . ID=gene-AC57_RS10745;Name=AC57_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10745;old_locus_tag=AC57_2764 NZ_JJLR01000100.1 Protein Homology CDS 2426 2860 . + 0 ID=cds-WP_001309734.1-2;Parent=gene-AC57_RS10745;Dbxref=GenBank:WP_001309734.1;Name=WP_001309734.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS10745;product=transposase;protein_id=WP_001309734.1;transl_table=11 NZ_JJLR01000100.1 RefSeq gene 2857 3094 . + . ID=gene-AC57_RS0124645;Name=tnpB;end_range=3094,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS0124645;old_locus_tag=AC57_2765;partial=true NZ_JJLR01000100.1 Protein Homology CDS 2857 3094 . + 0 ID=cds-WP_032285719.1;Parent=gene-AC57_RS0124645;Dbxref=GenBank:WP_032285719.1;Name=WP_032285719.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;end_range=3094,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS0124645;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032285719.1;transl_table=11 ##sequence-region NZ_JJLR01000101.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000101.1 RefSeq region 1 2047 . + . ID=NZ_JJLR01000101.1:1..2047;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000101.1 RefSeq pseudogene 1 143 . - . ID=gene-AC57_RS29175;Name=AC57_RS29175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29175;old_locus_tag=AC57_2766;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000101.1 Protein Homology CDS 1 143 . - 0 ID=cds-AC57_RS29175;Parent=gene-AC57_RS29175;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AC57_RS29175;partial=true;product=IscS subfamily cysteine desulfurase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000101.1 RefSeq gene 384 872 . - . ID=gene-AC57_RS10740;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AC57_RS10740;old_locus_tag=AC57_2767 NZ_JJLR01000101.1 Protein Homology CDS 384 872 . - 0 ID=cds-WP_001241356.1;Parent=gene-AC57_RS10740;Dbxref=GenBank:WP_001241356.1;Name=WP_001241356.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AC57_RS10740;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241356.1;transl_table=11 NZ_JJLR01000101.1 RefSeq gene 1142 1882 . - . ID=gene-AC57_RS10735;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AC57_RS10735;old_locus_tag=AC57_2768 NZ_JJLR01000101.1 Protein Homology CDS 1142 1882 . - 0 ID=cds-WP_000940019.1;Parent=gene-AC57_RS10735;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AC57_RS10735;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 ##sequence-region NZ_JJLR01000102.1 1 103708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000102.1 RefSeq region 1 103708 . + . ID=NZ_JJLR01000102.1:1..103708;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000102.1 RefSeq pseudogene 1 306 . - . ID=gene-AC57_RS0124650;Name=AC57_RS0124650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124650;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000102.1 Protein Homology CDS 1 306 . - 0 ID=cds-AC57_RS0124650;Parent=gene-AC57_RS0124650;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0124650;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000102.1 RefSeq pseudogene 363 809 . + . ID=gene-AC57_RS10730;Name=AC57_RS10730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS10730;old_locus_tag=AC57_2770;partial=true;pseudo=true;start_range=.,363 NZ_JJLR01000102.1 Protein Homology CDS 363 809 . + 0 ID=cds-AC57_RS10730;Parent=gene-AC57_RS10730;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AC57_RS10730;partial=true;product=glycine zipper 2TM domain-containing protein;pseudo=true;start_range=.,363;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 825 1364 . + . ID=gene-AC57_RS10725;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=AC57_RS10725;old_locus_tag=AC57_2771 NZ_JJLR01000102.1 Protein Homology CDS 825 1364 . + 0 ID=cds-WP_000755173.1;Parent=gene-AC57_RS10725;Dbxref=GenBank:WP_000755173.1;Name=WP_000755173.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417001.1;locus_tag=AC57_RS10725;product=DUF5384 family protein;protein_id=WP_000755173.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 1662 3614 . - . ID=gene-AC57_RS10720;Name=AC57_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10720;old_locus_tag=AC57_2772 NZ_JJLR01000102.1 Protein Homology CDS 1662 3614 . - 0 ID=cds-WP_000037308.1;Parent=gene-AC57_RS10720;Dbxref=GenBank:WP_000037308.1;Name=WP_000037308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037307.1;locus_tag=AC57_RS10720;product=DUF262 domain-containing protein;protein_id=WP_000037308.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 3611 4891 . - . ID=gene-AC57_RS10715;Name=AC57_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10715;old_locus_tag=AC57_2773 NZ_JJLR01000102.1 Protein Homology CDS 3611 4891 . - 0 ID=cds-WP_000996724.1;Parent=gene-AC57_RS10715;Dbxref=GenBank:WP_000996724.1;Name=WP_000996724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246209.1;locus_tag=AC57_RS10715;product=DUF262 domain-containing protein;protein_id=WP_000996724.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 5274 6851 . - . ID=gene-AC57_RS10710;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AC57_RS10710;old_locus_tag=AC57_2774 NZ_JJLR01000102.1 Protein Homology CDS 5274 6851 . - 0 ID=cds-WP_000138270.1;Parent=gene-AC57_RS10710;Dbxref=GenBank:WP_000138270.1;Name=WP_000138270.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AC57_RS10710;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138270.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 6920 8386 . - . ID=gene-AC57_RS10705;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AC57_RS10705;old_locus_tag=AC57_2775 NZ_JJLR01000102.1 Protein Homology CDS 6920 8386 . - 0 ID=cds-WP_032237077.1;Parent=gene-AC57_RS10705;Dbxref=GenBank:WP_032237077.1;Name=WP_032237077.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AC57_RS10705;product=IMP dehydrogenase;protein_id=WP_032237077.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 8548 9918 . + . ID=gene-AC57_RS10700;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AC57_RS10700;old_locus_tag=AC57_2777 NZ_JJLR01000102.1 Protein Homology CDS 8548 9918 . + 0 ID=cds-WP_000937931.1;Parent=gene-AC57_RS10700;Dbxref=GenBank:WP_000937931.1;Name=WP_000937931.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417004.1;locus_tag=AC57_RS10700;product=exodeoxyribonuclease VII large subunit;protein_id=WP_000937931.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 9915 10130 . - . ID=gene-AC57_RS10695;Name=yfgJ;gbkey=Gene;gene=yfgJ;gene_biotype=protein_coding;locus_tag=AC57_RS10695;old_locus_tag=AC57_2778 NZ_JJLR01000102.1 Protein Homology CDS 9915 10130 . - 0 ID=cds-WP_001300368.1;Parent=gene-AC57_RS10695;Dbxref=GenBank:WP_001300368.1;Name=WP_001300368.1;gbkey=CDS;gene=yfgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311399.1;locus_tag=AC57_RS10695;product=zinc ribbon domain-containing protein;protein_id=WP_001300368.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 10199 11671 . - . ID=gene-AC57_RS10690;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AC57_RS10690;old_locus_tag=AC57_2779 NZ_JJLR01000102.1 Protein Homology CDS 10199 11671 . - 0 ID=cds-WP_001488276.1;Parent=gene-AC57_RS10690;Dbxref=GenBank:WP_001488276.1;Name=WP_001488276.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AC57_RS10690;product=ribosome biogenesis GTPase Der;protein_id=WP_001488276.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 11789 12967 . - . ID=gene-AC57_RS10685;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AC57_RS10685;old_locus_tag=AC57_2780 NZ_JJLR01000102.1 Protein Homology CDS 11789 12967 . - 0 ID=cds-WP_001177049.1;Parent=gene-AC57_RS10685;Dbxref=GenBank:WP_001177049.1;Name=WP_001177049.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=AC57_RS10685;product=outer membrane protein assembly factor BamB;protein_id=WP_001177049.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 12978 13598 . - . ID=gene-AC57_RS10680;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AC57_RS10680;old_locus_tag=AC57_2781 NZ_JJLR01000102.1 Protein Homology CDS 12978 13598 . - 0 ID=cds-WP_000409205.1;Parent=gene-AC57_RS10680;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AC57_RS10680;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 13616 14890 . - . ID=gene-AC57_RS10675;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AC57_RS10675;old_locus_tag=AC57_2782 NZ_JJLR01000102.1 Protein Homology CDS 13616 14890 . - 0 ID=cds-WP_032279506.1;Parent=gene-AC57_RS10675;Dbxref=GenBank:WP_032279506.1;Name=WP_032279506.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AC57_RS10675;product=histidine--tRNA ligase;protein_id=WP_032279506.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 15001 16119 . - . ID=gene-AC57_RS10670;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AC57_RS10670;old_locus_tag=AC57_2783 NZ_JJLR01000102.1 Protein Homology CDS 15001 16119 . - 0 ID=cds-WP_000551807.1;Parent=gene-AC57_RS10670;Dbxref=GenBank:WP_000551807.1;Name=WP_000551807.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AC57_RS10670;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 16146 17159 . - . ID=gene-AC57_RS10665;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AC57_RS10665;old_locus_tag=AC57_2784 NZ_JJLR01000102.1 Protein Homology CDS 16146 17159 . - 0 ID=cds-WP_032237069.1;Parent=gene-AC57_RS10665;Dbxref=GenBank:WP_032237069.1;Name=WP_032237069.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AC57_RS10665;product=cytoskeleton protein RodZ;protein_id=WP_032237069.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 17444 18598 . - . ID=gene-AC57_RS10660;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AC57_RS10660;old_locus_tag=AC57_2785 NZ_JJLR01000102.1 Protein Homology CDS 17444 18598 . - 0 ID=cds-WP_000003317.1;Parent=gene-AC57_RS10660;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AC57_RS10660;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 18748 19179 . - . ID=gene-AC57_RS10655;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AC57_RS10655;old_locus_tag=AC57_2786 NZ_JJLR01000102.1 Protein Homology CDS 18748 19179 . - 0 ID=cds-WP_000963837.1;Parent=gene-AC57_RS10655;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AC57_RS10655;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 19328 21640 . - . ID=gene-AC57_RS10650;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AC57_RS10650;old_locus_tag=AC57_2787 NZ_JJLR01000102.1 Protein Homology CDS 19328 21640 . - 0 ID=cds-WP_032237068.1;Parent=gene-AC57_RS10650;Dbxref=GenBank:WP_032237068.1;Name=WP_032237068.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AC57_RS10650;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_032237068.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 21641 26602 . - . ID=gene-AC57_RS10645;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AC57_RS10645;old_locus_tag=AC57_2788 NZ_JJLR01000102.1 Protein Homology CDS 21641 26602 . - 0 ID=cds-WP_032237067.1;Parent=gene-AC57_RS10645;Dbxref=GenBank:WP_032237067.1;Name=WP_032237067.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311413.1;locus_tag=AC57_RS10645;product=alpha2-macroglobulin;protein_id=WP_032237067.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 26809 27654 . + . ID=gene-AC57_RS10640;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AC57_RS10640;old_locus_tag=AC57_2789 NZ_JJLR01000102.1 Protein Homology CDS 26809 27654 . + 0 ID=cds-WP_000108626.1;Parent=gene-AC57_RS10640;Dbxref=GenBank:WP_000108626.1;Name=WP_000108626.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417016.4;locus_tag=AC57_RS10640;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_000108626.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 28316 28441 . + . ID=gene-AC57_RS30790;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AC57_RS30790;old_locus_tag=AC57_2791 NZ_JJLR01000102.1 Protein Homology CDS 28316 28441 . + 0 ID=cds-WP_001380605.1;Parent=gene-AC57_RS30790;Dbxref=GenBank:WP_001380605.1;Name=WP_001380605.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AC57_RS30790;product=small toxic inner membrane protein TimP;protein_id=WP_001380605.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 28472 29248 . - . ID=gene-AC57_RS10635;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AC57_RS10635;old_locus_tag=AC57_2792 NZ_JJLR01000102.1 Protein Homology CDS 28472 29248 . - 0 ID=cds-WP_001295479.1;Parent=gene-AC57_RS10635;Dbxref=GenBank:WP_001295479.1;Name=WP_001295479.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708361.2;locus_tag=AC57_RS10635;product=enhanced serine sensitivity protein SseB;protein_id=WP_001295479.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 29390 30673 . - . ID=gene-AC57_RS10630;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AC57_RS10630;old_locus_tag=AC57_2793 NZ_JJLR01000102.1 Protein Homology CDS 29390 30673 . - 0 ID=cds-WP_000133580.1;Parent=gene-AC57_RS10630;Dbxref=GenBank:WP_000133580.1;Name=WP_000133580.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417018.4;locus_tag=AC57_RS10630;product=aminopeptidase PepB;protein_id=WP_000133580.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 30731 30931 . - . ID=gene-AC57_RS10625;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AC57_RS10625;old_locus_tag=AC57_2794 NZ_JJLR01000102.1 Protein Homology CDS 30731 30931 . - 0 ID=cds-WP_000523616.1;Parent=gene-AC57_RS10625;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AC57_RS10625;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 30943 31278 . - . ID=gene-AC57_RS10620;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AC57_RS10620;old_locus_tag=AC57_2795 NZ_JJLR01000102.1 Protein Homology CDS 30943 31278 . - 0 ID=cds-WP_001124469.1;Parent=gene-AC57_RS10620;Dbxref=GenBank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AC57_RS10620;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 31280 33130 . - . ID=gene-AC57_RS10615;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AC57_RS10615;old_locus_tag=AC57_2796 NZ_JJLR01000102.1 Protein Homology CDS 31280 33130 . - 0 ID=cds-WP_001196613.1;Parent=gene-AC57_RS10615;Dbxref=GenBank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AC57_RS10615;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 33147 33662 . - . ID=gene-AC57_RS10610;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AC57_RS10610;old_locus_tag=AC57_2797 NZ_JJLR01000102.1 Protein Homology CDS 33147 33662 . - 0 ID=cds-WP_000384413.1;Parent=gene-AC57_RS10610;Dbxref=GenBank:WP_000384413.1;Name=WP_000384413.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AC57_RS10610;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 33758 34081 . - . ID=gene-AC57_RS10605;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AC57_RS10605;old_locus_tag=AC57_2799 NZ_JJLR01000102.1 Protein Homology CDS 33758 34081 . - 0 ID=cds-WP_000028953.1;Parent=gene-AC57_RS10605;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AC57_RS10605;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 34098 34484 . - . ID=gene-AC57_RS10600;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AC57_RS10600;old_locus_tag=AC57_2800 NZ_JJLR01000102.1 Protein Homology CDS 34098 34484 . - 0 ID=cds-WP_000331707.1;Parent=gene-AC57_RS10600;Dbxref=GenBank:WP_000331707.1;Name=WP_000331707.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AC57_RS10600;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_000331707.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 34512 35726 . - . ID=gene-AC57_RS10595;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AC57_RS10595;old_locus_tag=AC57_2801 NZ_JJLR01000102.1 Protein Homology CDS 34512 35726 . - 0 ID=cds-WP_001295373.1;Parent=gene-AC57_RS10595;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AC57_RS10595;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 35967 36455 . - . ID=gene-AC57_RS10590;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AC57_RS10590;old_locus_tag=AC57_2802 NZ_JJLR01000102.1 Protein Homology CDS 35967 36455 . - 0 ID=cds-WP_001241356.1-2;Parent=gene-AC57_RS10590;Dbxref=GenBank:WP_001241356.1;Name=WP_001241356.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AC57_RS10590;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241356.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 37089 37829 . - . ID=gene-AC57_RS10585;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AC57_RS10585;old_locus_tag=AC57_2803 NZ_JJLR01000102.1 Protein Homology CDS 37089 37829 . - 0 ID=cds-WP_000940019.1-2;Parent=gene-AC57_RS10585;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AC57_RS10585;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 37948 38751 . + . ID=gene-AC57_RS10580;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AC57_RS10580;old_locus_tag=AC57_2804 NZ_JJLR01000102.1 Protein Homology CDS 37948 38751 . + 0 ID=cds-WP_000553451.1;Parent=gene-AC57_RS10580;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AC57_RS10580;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 38896 39750 . + . ID=gene-AC57_RS10575;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=AC57_RS10575;old_locus_tag=AC57_2805 NZ_JJLR01000102.1 Protein Homology CDS 38896 39750 . + 0 ID=cds-WP_001459993.1;Parent=gene-AC57_RS10575;Dbxref=GenBank:WP_001459993.1;Name=WP_001459993.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311427.2;locus_tag=AC57_RS10575;product=alpha/beta hydrolase;protein_id=WP_001459993.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 39941 41221 . + . ID=gene-AC57_RS10570;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AC57_RS10570;old_locus_tag=AC57_2806 NZ_JJLR01000102.1 Protein Homology CDS 39941 41221 . + 0 ID=cds-WP_000982994.1;Parent=gene-AC57_RS10570;Dbxref=GenBank:WP_000982994.1;Name=WP_000982994.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AC57_RS10570;product=stationary phase inducible protein CsiE;protein_id=WP_000982994.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 41213 42352 . - . ID=gene-AC57_RS10565;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AC57_RS10565;old_locus_tag=AC57_2807 NZ_JJLR01000102.1 Protein Homology CDS 41213 42352 . - 0 ID=cds-WP_032237066.1;Parent=gene-AC57_RS10565;Dbxref=GenBank:WP_032237066.1;Name=WP_032237066.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417031.1;locus_tag=AC57_RS10565;product=3-phenylpropionate MFS transporter;protein_id=WP_032237066.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 42512 43402 . - . ID=gene-AC57_RS10560;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AC57_RS10560;old_locus_tag=AC57_2808 NZ_JJLR01000102.1 Protein Homology CDS 42512 43402 . - 0 ID=cds-WP_000423263.1;Parent=gene-AC57_RS10560;Dbxref=GenBank:WP_000423263.1;Name=WP_000423263.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311430.1;locus_tag=AC57_RS10560;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423263.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 43538 44899 . + . ID=gene-AC57_RS10555;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AC57_RS10555;old_locus_tag=AC57_2809 NZ_JJLR01000102.1 Protein Homology CDS 43538 44899 . + 0 ID=cds-WP_000211172.1;Parent=gene-AC57_RS10555;Dbxref=GenBank:WP_000211172.1;Name=WP_000211172.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AC57_RS10555;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 44896 45414 . + . ID=gene-AC57_RS10550;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AC57_RS10550;old_locus_tag=AC57_2810 NZ_JJLR01000102.1 Protein Homology CDS 44896 45414 . + 0 ID=cds-WP_001276072.1;Parent=gene-AC57_RS10550;Dbxref=GenBank:WP_001276072.1;Name=WP_001276072.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AC57_RS10550;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001276072.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 45414 45734 . + . ID=gene-AC57_RS10545;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AC57_RS10545;old_locus_tag=AC57_2811 NZ_JJLR01000102.1 Protein Homology CDS 45414 45734 . + 0 ID=cds-WP_032237065.1;Parent=gene-AC57_RS10545;Dbxref=GenBank:WP_032237065.1;Name=WP_032237065.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AC57_RS10545;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_032237065.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 45731 46543 . + . ID=gene-AC57_RS10540;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AC57_RS10540;old_locus_tag=AC57_2812 NZ_JJLR01000102.1 Protein Homology CDS 45731 46543 . + 0 ID=cds-WP_001281379.1;Parent=gene-AC57_RS10540;Dbxref=GenBank:WP_001281379.1;Name=WP_001281379.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417036.1;locus_tag=AC57_RS10540;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281379.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 46553 47755 . + . ID=gene-AC57_RS10535;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AC57_RS10535;old_locus_tag=AC57_2813 NZ_JJLR01000102.1 Protein Homology CDS 46553 47755 . + 0 ID=cds-WP_000660788.1;Parent=gene-AC57_RS10535;Dbxref=GenBank:WP_000660788.1;Name=WP_000660788.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417037.1;locus_tag=AC57_RS10535;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_000660788.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 47852 48274 . + . ID=gene-AC57_RS10530;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AC57_RS10530;old_locus_tag=AC57_2814 NZ_JJLR01000102.1 Protein Homology CDS 47852 48274 . + 0 ID=cds-WP_001094726.1;Parent=gene-AC57_RS10530;Dbxref=GenBank:WP_001094726.1;Name=WP_001094726.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417038.4;locus_tag=AC57_RS10530;product=DoxX family protein;protein_id=WP_001094726.1;transl_table=11 NZ_JJLR01000102.1 RefSeq pseudogene 48322 49194 . - . ID=gene-AC57_RS0124655;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=pseudogene;locus_tag=AC57_RS0124655;pseudo=true NZ_JJLR01000102.1 Protein Homology CDS 48322 49194 . - 0 ID=cds-AC57_RS0124655;Parent=gene-AC57_RS0124655;Note=internal stop;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417039.1;locus_tag=AC57_RS0124655;product=aldose 1-epimerase;pseudo=true;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 49206 50300 . - . ID=gene-AC57_RS10525;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AC57_RS10525;old_locus_tag=AC57_2817 NZ_JJLR01000102.1 Protein Homology CDS 49206 50300 . - 0 ID=cds-WP_000700787.1;Parent=gene-AC57_RS10525;Dbxref=GenBank:WP_000700787.1;Name=WP_000700787.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AC57_RS10525;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700787.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 50333 51331 . - . ID=gene-AC57_RS10520;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AC57_RS10520;old_locus_tag=AC57_2818 NZ_JJLR01000102.1 Protein Homology CDS 50333 51331 . - 0 ID=cds-WP_032279508.1;Parent=gene-AC57_RS10520;Dbxref=GenBank:WP_032279508.1;Name=WP_032279508.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417041.1;locus_tag=AC57_RS10520;product=ABC transporter permease;protein_id=WP_032279508.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 51356 52867 . - . ID=gene-AC57_RS10515;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=AC57_RS10515;old_locus_tag=AC57_2819 NZ_JJLR01000102.1 Protein Homology CDS 51356 52867 . - 0 ID=cds-WP_000493470.1;Parent=gene-AC57_RS10515;Dbxref=GenBank:WP_000493470.1;Name=WP_000493470.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yphE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417042.1;locus_tag=AC57_RS10515;product=sugar ABC transporter ATP-binding protein;protein_id=WP_000493470.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 52890 53873 . - . ID=gene-AC57_RS10510;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=AC57_RS10510;old_locus_tag=AC57_2820 NZ_JJLR01000102.1 Protein Homology CDS 52890 53873 . - 0 ID=cds-WP_001142427.1;Parent=gene-AC57_RS10510;Dbxref=GenBank:WP_001142427.1;Name=WP_001142427.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417043.1;locus_tag=AC57_RS10510;product=substrate-binding domain-containing protein;protein_id=WP_001142427.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 53970 57251 . - . ID=gene-AC57_RS10505;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=AC57_RS10505;old_locus_tag=AC57_2821 NZ_JJLR01000102.1 Protein Homology CDS 53970 57251 . - 0 ID=cds-WP_001333903.1;Parent=gene-AC57_RS10505;Dbxref=GenBank:WP_001333903.1;Name=WP_001333903.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417044.4;locus_tag=AC57_RS10505;product=DUF5107 domain-containing protein;protein_id=WP_001333903.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 57369 58562 . + . ID=gene-AC57_RS10500;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AC57_RS10500;old_locus_tag=AC57_2822 NZ_JJLR01000102.1 Protein Homology CDS 57369 58562 . + 0 ID=cds-WP_001200769.1;Parent=gene-AC57_RS10500;Dbxref=GenBank:WP_001200769.1;Name=WP_001200769.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417045.4;locus_tag=AC57_RS10500;product=ROK family protein;protein_id=WP_001200769.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 58760 60013 . - . ID=gene-AC57_RS10495;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AC57_RS10495;old_locus_tag=AC57_2823 NZ_JJLR01000102.1 Protein Homology CDS 58760 60013 . - 0 ID=cds-WP_000919159.1;Parent=gene-AC57_RS10495;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AC57_RS10495;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 60341 61531 . + . ID=gene-AC57_RS10490;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AC57_RS10490;old_locus_tag=AC57_2824 NZ_JJLR01000102.1 Protein Homology CDS 60341 61531 . + 0 ID=cds-WP_000883122.1;Parent=gene-AC57_RS10490;Dbxref=GenBank:WP_000883122.1;Name=WP_000883122.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417047.1;locus_tag=AC57_RS10490;product=NO-inducible flavohemoprotein;protein_id=WP_000883122.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 61576 61914 . - . ID=gene-AC57_RS10485;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AC57_RS10485;old_locus_tag=AC57_2825 NZ_JJLR01000102.1 Protein Homology CDS 61576 61914 . - 0 ID=cds-WP_000717694.1;Parent=gene-AC57_RS10485;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AC57_RS10485;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 61975 63309 . - . ID=gene-AC57_RS10480;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AC57_RS10480;old_locus_tag=AC57_2826 NZ_JJLR01000102.1 Protein Homology CDS 61975 63309 . - 0 ID=cds-WP_001295369.1;Parent=gene-AC57_RS10480;Dbxref=GenBank:WP_001295369.1;Name=WP_001295369.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AC57_RS10480;product=two-component system response regulator GlrR;protein_id=WP_001295369.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 63299 64012 . - . ID=gene-AC57_RS10475;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AC57_RS10475;old_locus_tag=AC57_2827 NZ_JJLR01000102.1 Protein Homology CDS 63299 64012 . - 0 ID=cds-WP_001215861.1;Parent=gene-AC57_RS10475;Dbxref=GenBank:WP_001215861.1;Name=WP_001215861.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AC57_RS10475;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_001215861.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 64177 65604 . - . ID=gene-AC57_RS10470;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AC57_RS10470;old_locus_tag=AC57_2828 NZ_JJLR01000102.1 Protein Homology CDS 64177 65604 . - 0 ID=cds-WP_001311037.1;Parent=gene-AC57_RS10470;Dbxref=GenBank:WP_001311037.1;Name=WP_001311037.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AC57_RS10470;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_001311037.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 66162 70049 . - . ID=gene-AC57_RS10465;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AC57_RS10465;old_locus_tag=AC57_2830 NZ_JJLR01000102.1 Protein Homology CDS 66162 70049 . - 0 ID=cds-WP_000970103.1;Parent=gene-AC57_RS10465;Dbxref=GenBank:WP_000970103.1;Name=WP_000970103.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026170.1;locus_tag=AC57_RS10465;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_000970103.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 70307 71863 . + . ID=gene-AC57_RS10460;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AC57_RS10460;old_locus_tag=AC57_2831 NZ_JJLR01000102.1 Protein Homology CDS 70307 71863 . + 0 ID=cds-WP_000734212.1;Parent=gene-AC57_RS10460;Dbxref=GenBank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AC57_RS10460;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 71860 72363 . - . ID=gene-AC57_RS10455;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AC57_RS10455;old_locus_tag=AC57_2832 NZ_JJLR01000102.1 Protein Homology CDS 71860 72363 . - 0 ID=cds-WP_032279512.1;Parent=gene-AC57_RS10455;Dbxref=GenBank:WP_032279512.1;Name=WP_032279512.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311452.2;locus_tag=AC57_RS10455;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_032279512.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 72421 73056 . - . ID=gene-AC57_RS10450;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AC57_RS10450;old_locus_tag=AC57_2833 NZ_JJLR01000102.1 Protein Homology CDS 72421 73056 . - 0 ID=cds-WP_000190655.1;Parent=gene-AC57_RS10450;Dbxref=GenBank:WP_000190655.1;Name=WP_000190655.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417055.4;locus_tag=AC57_RS10450;product=phosphatidylglycerophosphatase C;protein_id=WP_000190655.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 73265 74113 . + . ID=gene-AC57_RS10445;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AC57_RS10445;old_locus_tag=AC57_2834 NZ_JJLR01000102.1 Protein Homology CDS 73265 74113 . + 0 ID=cds-WP_001013779.1;Parent=gene-AC57_RS10445;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AC57_RS10445;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 74169 74429 . + . ID=gene-AC57_RS10440;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AC57_RS10440;old_locus_tag=AC57_2835 NZ_JJLR01000102.1 Protein Homology CDS 74169 74429 . + 0 ID=cds-WP_001196283.1;Parent=gene-AC57_RS10440;Dbxref=GenBank:WP_001196283.1;Name=WP_001196283.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417057.1;locus_tag=AC57_RS10440;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196283.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 74623 74703 . - . ID=gene-AC57_RS0124660;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AC57_RS0124660 NZ_JJLR01000102.1 Protein Homology CDS 74623 74703 . - 0 ID=cds-WP_000128776.1;Parent=gene-AC57_RS0124660;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AC57_RS0124660;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 75124 75504 . - . ID=gene-AC57_RS10435;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AC57_RS10435;old_locus_tag=AC57_2836 NZ_JJLR01000102.1 Protein Homology CDS 75124 75504 . - 0 ID=cds-WP_000986037.1;Parent=gene-AC57_RS10435;Dbxref=GenBank:WP_000986037.1;Name=WP_000986037.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311456.1;locus_tag=AC57_RS10435;product=holo-ACP synthase;protein_id=WP_000986037.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 75504 76235 . - . ID=gene-AC57_RS10430;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AC57_RS10430;old_locus_tag=AC57_2837 NZ_JJLR01000102.1 Protein Homology CDS 75504 76235 . - 0 ID=cds-WP_001297412.1;Parent=gene-AC57_RS10430;Dbxref=GenBank:WP_001297412.1;Name=WP_001297412.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AC57_RS10430;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001297412.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 76247 76975 . - . ID=gene-AC57_RS10425;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AC57_RS10425;old_locus_tag=AC57_2838 NZ_JJLR01000102.1 Protein Homology CDS 76247 76975 . - 0 ID=cds-WP_000399393.1;Parent=gene-AC57_RS10425;Dbxref=GenBank:WP_000399393.1;Name=WP_000399393.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AC57_RS10425;product=DNA repair protein RecO;protein_id=WP_000399393.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 76987 77892 . - . ID=gene-AC57_RS10420;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AC57_RS10420;old_locus_tag=AC57_2839 NZ_JJLR01000102.1 Protein Homology CDS 76987 77892 . - 0 ID=cds-WP_000020749.1;Parent=gene-AC57_RS10420;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AC57_RS10420;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 77889 78569 . - . ID=gene-AC57_RS10415;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AC57_RS10415;old_locus_tag=AC57_2840 NZ_JJLR01000102.1 Protein Homology CDS 77889 78569 . - 0 ID=cds-WP_001068343.1;Parent=gene-AC57_RS10415;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AC57_RS10415;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 78841 79815 . - . ID=gene-AC57_RS10410;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AC57_RS10410;old_locus_tag=AC57_2841 NZ_JJLR01000102.1 Protein Homology CDS 78841 79815 . - 0 ID=cds-WP_000002541.1;Parent=gene-AC57_RS10410;Dbxref=GenBank:WP_000002541.1;Name=WP_000002541.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417063.1;locus_tag=AC57_RS10410;product=signal peptidase I;protein_id=WP_000002541.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 79831 81630 . - . ID=gene-AC57_RS10405;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AC57_RS10405;old_locus_tag=AC57_2842 NZ_JJLR01000102.1 Protein Homology CDS 79831 81630 . - 0 ID=cds-WP_032237062.1;Parent=gene-AC57_RS10405;Dbxref=GenBank:WP_032237062.1;Name=WP_032237062.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AC57_RS10405;product=translation elongation factor 4;protein_id=WP_032237062.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 81828 82307 . - . ID=gene-AC57_RS10400;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AC57_RS10400;old_locus_tag=AC57_2843 NZ_JJLR01000102.1 Protein Homology CDS 81828 82307 . - 0 ID=cds-WP_000589068.1;Parent=gene-AC57_RS10400;Dbxref=GenBank:WP_000589068.1;Name=WP_000589068.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417065.1;locus_tag=AC57_RS10400;product=SoxR-reducing system protein RseC;protein_id=WP_000589068.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 82304 83260 . - . ID=gene-AC57_RS10395;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AC57_RS10395;old_locus_tag=AC57_2844 NZ_JJLR01000102.1 Protein Homology CDS 82304 83260 . - 0 ID=cds-WP_000812053.1;Parent=gene-AC57_RS10395;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AC57_RS10395;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 83260 83910 . - . ID=gene-AC57_RS10390;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AC57_RS10390;old_locus_tag=AC57_2845 NZ_JJLR01000102.1 Protein Homology CDS 83260 83910 . - 0 ID=cds-WP_001168459.1;Parent=gene-AC57_RS10390;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AC57_RS10390;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 83943 84518 . - . ID=gene-AC57_RS10385;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AC57_RS10385;old_locus_tag=AC57_2846 NZ_JJLR01000102.1 Protein Homology CDS 83943 84518 . - 0 ID=cds-WP_001295364.1;Parent=gene-AC57_RS10385;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AC57_RS10385;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 84515 84670 . - . ID=gene-AC57_RS29895;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AC57_RS29895 NZ_JJLR01000102.1 Protein Homology CDS 84515 84670 . - 0 ID=cds-WP_001303621.1;Parent=gene-AC57_RS29895;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AC57_RS29895;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 84926 86548 . + . ID=gene-AC57_RS10380;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AC57_RS10380;old_locus_tag=AC57_2847 NZ_JJLR01000102.1 Protein Homology CDS 84926 86548 . + 0 ID=cds-WP_001094484.1;Parent=gene-AC57_RS10380;Dbxref=GenBank:WP_001094484.1;Name=WP_001094484.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311467.1;locus_tag=AC57_RS10380;product=L-aspartate oxidase;protein_id=WP_001094484.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 86533 87270 . - . ID=gene-AC57_RS10375;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AC57_RS10375;old_locus_tag=AC57_2848 NZ_JJLR01000102.1 Protein Homology CDS 86533 87270 . - 0 ID=cds-WP_001295363.1;Parent=gene-AC57_RS10375;Dbxref=GenBank:WP_001295363.1;Name=WP_001295363.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AC57_RS10375;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_001295363.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 87402 88736 . + . ID=gene-AC57_RS10370;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AC57_RS10370;old_locus_tag=AC57_2849 NZ_JJLR01000102.1 Protein Homology CDS 87402 88736 . + 0 ID=cds-WP_000219193.1;Parent=gene-AC57_RS10370;Dbxref=GenBank:WP_000219193.1;Name=WP_000219193.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AC57_RS10370;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 88945 89826 . - . ID=gene-AC57_RS10360;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=AC57_RS10360;old_locus_tag=AC57_2851 NZ_JJLR01000102.1 Protein Homology CDS 88945 89826 . - 0 ID=cds-WP_001300638.1;Parent=gene-AC57_RS10360;Dbxref=GenBank:WP_001300638.1;Name=WP_001300638.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417072.4;locus_tag=AC57_RS10360;product=LysR family transcriptional regulator;protein_id=WP_001300638.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 89929 90516 . + . ID=gene-AC57_RS10355;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AC57_RS10355;old_locus_tag=AC57_2852 NZ_JJLR01000102.1 Protein Homology CDS 89929 90516 . + 0 ID=cds-WP_000189207.1;Parent=gene-AC57_RS10355;Dbxref=GenBank:WP_000189207.1;Name=WP_000189207.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417073.1;locus_tag=AC57_RS10355;product=cysteine/O-acetylserine transporter;protein_id=WP_000189207.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 90572 90955 . - . ID=gene-AC57_RS10350;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AC57_RS10350;old_locus_tag=AC57_2853 NZ_JJLR01000102.1 Protein Homology CDS 90572 90955 . - 0 ID=cds-WP_000627807.1;Parent=gene-AC57_RS10350;Dbxref=GenBank:WP_000627807.1;Name=WP_000627807.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AC57_RS10350;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627807.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 91260 91949 . + . ID=gene-AC57_RS10345;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AC57_RS10345;old_locus_tag=AC57_2854 NZ_JJLR01000102.1 Protein Homology CDS 91260 91949 . + 0 ID=cds-WP_001262716.1;Parent=gene-AC57_RS10345;Dbxref=GenBank:WP_001262716.1;Name=WP_001262716.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=AC57_RS10345;product=uracil-DNA glycosylase;protein_id=WP_001262716.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 91997 93034 . - . ID=gene-AC57_RS10340;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AC57_RS10340;old_locus_tag=AC57_2855 NZ_JJLR01000102.1 Protein Homology CDS 91997 93034 . - 0 ID=cds-WP_000997403.1;Parent=gene-AC57_RS10340;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AC57_RS10340;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 93241 93660 . + . ID=gene-AC57_RS10335;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AC57_RS10335;old_locus_tag=AC57_2856 NZ_JJLR01000102.1 Protein Homology CDS 93241 93660 . + 0 ID=cds-WP_001098726.1;Parent=gene-AC57_RS10335;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AC57_RS10335;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 93729 94427 . + . ID=gene-AC57_RS10330;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AC57_RS10330;old_locus_tag=AC57_2857 NZ_JJLR01000102.1 Protein Homology CDS 93729 94427 . + 0 ID=cds-WP_001300438.1;Parent=gene-AC57_RS10330;Dbxref=GenBank:WP_001300438.1;Name=WP_001300438.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417078.4;locus_tag=AC57_RS10330;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_001300438.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 94459 97119 . + . ID=gene-AC57_RS10325;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AC57_RS10325;old_locus_tag=AC57_2858 NZ_JJLR01000102.1 Protein Homology CDS 94459 97119 . + 0 ID=cds-WP_000083005.1;Parent=gene-AC57_RS10325;Dbxref=GenBank:WP_000083005.1;Name=WP_000083005.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417079.1;locus_tag=AC57_RS10325;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000083005.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 97233 98588 . + . ID=gene-AC57_RS10320;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AC57_RS10320;old_locus_tag=AC57_2859 NZ_JJLR01000102.1 Protein Homology CDS 97233 98588 . + 0 ID=cds-WP_000949265.1;Parent=gene-AC57_RS10320;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AC57_RS10320;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 98634 98957 . + . ID=gene-AC57_RS10315;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AC57_RS10315;old_locus_tag=AC57_2860 NZ_JJLR01000102.1 Protein Homology CDS 98634 98957 . + 0 ID=cds-WP_071999884.1;Parent=gene-AC57_RS10315;Dbxref=GenBank:WP_071999884.1;Name=WP_071999884.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AC57_RS10315;product=YfiM family lipoprotein;protein_id=WP_071999884.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 98954 100252 . - . ID=gene-AC57_RS10310;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AC57_RS10310;old_locus_tag=AC57_2861 NZ_JJLR01000102.1 Protein Homology CDS 98954 100252 . - 0 ID=cds-WP_000841103.1;Parent=gene-AC57_RS10310;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AC57_RS10310;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JJLR01000102.1 RefSeq gene 100577 100692 . - . ID=gene-AC57_RS10305;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS10305;old_locus_tag=AC57_2862 NZ_JJLR01000102.1 cmsearch rRNA 100577 100692 . - . ID=rna-AC57_RS10305;Parent=gene-AC57_RS10305;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS10305;product=5S ribosomal RNA NZ_JJLR01000102.1 cmsearch exon 100577 100692 . - . ID=exon-AC57_RS10305-1;Parent=rna-AC57_RS10305;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS10305;product=5S ribosomal RNA NZ_JJLR01000102.1 RefSeq gene 100787 103692 . - . ID=gene-AC57_RS10300;Name=AC57_RS10300;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS10300;old_locus_tag=AC57_2863 NZ_JJLR01000102.1 cmsearch rRNA 100787 103692 . - . ID=rna-AC57_RS10300;Parent=gene-AC57_RS10300;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS10300;product=23S ribosomal RNA NZ_JJLR01000102.1 cmsearch exon 100787 103692 . - . ID=exon-AC57_RS10300-1;Parent=rna-AC57_RS10300;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS10300;product=23S ribosomal RNA ##sequence-region NZ_JJLR01000103.1 1 28305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000103.1 RefSeq region 1 28305 . + . ID=NZ_JJLR01000103.1:1..28305;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000103.1 RefSeq gene 1 512 . - . ID=gene-AC57_RS0124690;Name=AC57_RS0124690;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS0124690;partial=true;start_range=.,1 NZ_JJLR01000103.1 cmsearch rRNA 1 512 . - . ID=rna-AC57_RS0124690;Parent=gene-AC57_RS0124690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0124690;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLR01000103.1 cmsearch exon 1 512 . - . ID=exon-AC57_RS0124690-1;Parent=rna-AC57_RS0124690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0124690;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLR01000103.1 RefSeq gene 955 3528 . - . ID=gene-AC57_RS10295;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AC57_RS10295;old_locus_tag=AC57_2866 NZ_JJLR01000103.1 Protein Homology CDS 955 3528 . - 0 ID=cds-WP_001235102.1;Parent=gene-AC57_RS10295;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AC57_RS10295;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 3658 4389 . - . ID=gene-AC57_RS10290;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AC57_RS10290;old_locus_tag=AC57_2867 NZ_JJLR01000103.1 Protein Homology CDS 3658 4389 . - 0 ID=cds-WP_000040169.1;Parent=gene-AC57_RS10290;Dbxref=GenBank:WP_000040169.1;Name=WP_000040169.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=AC57_RS10290;product=purine nucleoside phosphorylase YfiH;protein_id=WP_000040169.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 4386 5366 . - . ID=gene-AC57_RS10285;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AC57_RS10285;old_locus_tag=AC57_2868 NZ_JJLR01000103.1 Protein Homology CDS 4386 5366 . - 0 ID=cds-WP_000079100.1;Parent=gene-AC57_RS10285;Dbxref=GenBank:WP_000079100.1;Name=WP_000079100.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AC57_RS10285;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079100.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 5501 6238 . + . ID=gene-AC57_RS10280;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AC57_RS10280;old_locus_tag=AC57_2869 NZ_JJLR01000103.1 Protein Homology CDS 5501 6238 . + 0 ID=cds-WP_032279912.1;Parent=gene-AC57_RS10280;Dbxref=GenBank:WP_032279912.1;Name=WP_032279912.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AC57_RS10280;product=outer membrane protein assembly factor BamD;protein_id=WP_032279912.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 6509 6850 . + . ID=gene-AC57_RS10275;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AC57_RS10275;old_locus_tag=AC57_2870 NZ_JJLR01000103.1 Protein Homology CDS 6509 6850 . + 0 ID=cds-WP_000178456.1;Parent=gene-AC57_RS10275;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AC57_RS10275;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JJLR01000103.1 cmsearch sequence_feature 6953 7078 . + . ID=id-NZ_JJLR01000103.1:6953..7078;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLR01000103.1 RefSeq gene 6954 7001 . + . ID=gene-AC57_RS29900;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AC57_RS29900 NZ_JJLR01000103.1 Protein Homology CDS 6954 7001 . + 0 ID=cds-WP_010723158.1;Parent=gene-AC57_RS29900;Dbxref=GenBank:WP_010723158.1;Name=WP_010723158.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417089.1;locus_tag=AC57_RS29900;product=phe operon leader peptide;protein_id=WP_010723158.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 7100 8260 . + . ID=gene-AC57_RS10270;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AC57_RS10270;old_locus_tag=AC57_2871 NZ_JJLR01000103.1 Protein Homology CDS 7100 8260 . + 0 ID=cds-WP_000200120.1;Parent=gene-AC57_RS10270;Dbxref=GenBank:WP_000200120.1;Name=WP_000200120.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AC57_RS10270;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200120.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 8303 9424 . - . ID=gene-AC57_RS10265;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AC57_RS10265;old_locus_tag=AC57_2872 NZ_JJLR01000103.1 Protein Homology CDS 8303 9424 . - 0 ID=cds-WP_000225221.1;Parent=gene-AC57_RS10265;Dbxref=GenBank:WP_000225221.1;Name=WP_000225221.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=AC57_RS10265;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225221.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 9435 10505 . - . ID=gene-AC57_RS10260;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AC57_RS10260;old_locus_tag=AC57_2873 NZ_JJLR01000103.1 Protein Homology CDS 9435 10505 . - 0 ID=cds-WP_001168037.1;Parent=gene-AC57_RS10260;Dbxref=GenBank:WP_001168037.1;Name=WP_001168037.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417092.1;locus_tag=AC57_RS10260;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168037.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 10715 11080 . + . ID=gene-AC57_RS10255;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=AC57_RS10255;old_locus_tag=AC57_2874 NZ_JJLR01000103.1 Protein Homology CDS 10715 11080 . + 0 ID=cds-WP_000976004.1;Parent=gene-AC57_RS10255;Dbxref=GenBank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AC57_RS10255;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 11230 11748 . + . ID=gene-AC57_RS10250;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=AC57_RS10250;old_locus_tag=AC57_2875 NZ_JJLR01000103.1 Protein Homology CDS 11230 11748 . + 0 ID=cds-WP_001212391.1;Parent=gene-AC57_RS10250;Dbxref=GenBank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AC57_RS10250;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 11738 12964 . + . ID=gene-AC57_RS10245;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AC57_RS10245;old_locus_tag=AC57_2876 NZ_JJLR01000103.1 Protein Homology CDS 11738 12964 . + 0 ID=cds-WP_023281433.1;Parent=gene-AC57_RS10245;Dbxref=GenBank:WP_023281433.1;Name=WP_023281433.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AC57_RS10245;product=diguanylate cyclase DgcN;protein_id=WP_023281433.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 12980 13462 . + . ID=gene-AC57_RS0124700;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AC57_RS0124700;old_locus_tag=AC57_2877 NZ_JJLR01000103.1 Protein Homology CDS 12980 13462 . + 0 ID=cds-WP_000589847.1;Parent=gene-AC57_RS0124700;Dbxref=GenBank:WP_000589847.1;Name=WP_000589847.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417096.1;locus_tag=AC57_RS0124700;product=OmpA family protein;protein_id=WP_000589847.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 13538 13885 . - . ID=gene-AC57_RS10240;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AC57_RS10240;old_locus_tag=AC57_2878 NZ_JJLR01000103.1 Protein Homology CDS 13538 13885 . - 0 ID=cds-WP_000065253.1;Parent=gene-AC57_RS10240;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AC57_RS10240;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 13927 14694 . - . ID=gene-AC57_RS10235;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AC57_RS10235;old_locus_tag=AC57_2879 NZ_JJLR01000103.1 Protein Homology CDS 13927 14694 . - 0 ID=cds-WP_000264777.1;Parent=gene-AC57_RS10235;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AC57_RS10235;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 14725 15273 . - . ID=gene-AC57_RS10230;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AC57_RS10230;old_locus_tag=AC57_2880 NZ_JJLR01000103.1 Protein Homology CDS 14725 15273 . - 0 ID=cds-WP_000043335.1;Parent=gene-AC57_RS10230;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AC57_RS10230;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 15292 15540 . - . ID=gene-AC57_RS10225;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AC57_RS10225;old_locus_tag=AC57_2881 NZ_JJLR01000103.1 Protein Homology CDS 15292 15540 . - 0 ID=cds-WP_000256450.1;Parent=gene-AC57_RS10225;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AC57_RS10225;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 15677 17038 . - . ID=gene-AC57_RS10220;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AC57_RS10220;old_locus_tag=AC57_2882 NZ_JJLR01000103.1 Protein Homology CDS 15677 17038 . - 0 ID=cds-WP_000460035.1;Parent=gene-AC57_RS10220;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AC57_RS10220;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 17205 17996 . + . ID=gene-AC57_RS10215;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AC57_RS10215;old_locus_tag=AC57_2883 NZ_JJLR01000103.1 Protein Homology CDS 17205 17996 . + 0 ID=cds-WP_001338897.1;Parent=gene-AC57_RS10215;Dbxref=GenBank:WP_001338897.1;Name=WP_001338897.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AC57_RS10215;product=cytochrome C assembly family protein;protein_id=WP_001338897.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 18017 19303 . + . ID=gene-AC57_RS10210;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AC57_RS10210;old_locus_tag=AC57_2884 NZ_JJLR01000103.1 Protein Homology CDS 18017 19303 . + 0 ID=cds-WP_010723175.1;Parent=gene-AC57_RS10210;Dbxref=GenBank:WP_010723175.1;Name=WP_010723175.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AC57_RS10210;product=HlyC/CorC family transporter;protein_id=WP_010723175.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 19358 19951 . - . ID=gene-AC57_RS10205;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AC57_RS10205;old_locus_tag=AC57_2885 NZ_JJLR01000103.1 Protein Homology CDS 19358 19951 . - 0 ID=cds-WP_001296310.1;Parent=gene-AC57_RS10205;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AC57_RS10205;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 20074 20952 . + . ID=gene-AC57_RS10200;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AC57_RS10200;old_locus_tag=AC57_2887 NZ_JJLR01000103.1 Protein Homology CDS 20074 20952 . + 0 ID=cds-WP_032237823.1;Parent=gene-AC57_RS10200;Dbxref=GenBank:WP_032237823.1;Name=WP_032237823.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AC57_RS10200;product=NAD(+) kinase;protein_id=WP_032237823.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 21038 22699 . + . ID=gene-AC57_RS10195;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AC57_RS10195;old_locus_tag=AC57_2888 NZ_JJLR01000103.1 Protein Homology CDS 21038 22699 . + 0 ID=cds-WP_000880910.1;Parent=gene-AC57_RS10195;Dbxref=GenBank:WP_000880910.1;Name=WP_000880910.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026172.1;locus_tag=AC57_RS10195;product=DNA repair protein RecN;protein_id=WP_000880910.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 22848 23189 . + . ID=gene-AC57_RS10190;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AC57_RS10190;old_locus_tag=AC57_2889 NZ_JJLR01000103.1 Protein Homology CDS 22848 23189 . + 0 ID=cds-WP_001203437.1;Parent=gene-AC57_RS10190;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AC57_RS10190;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 23251 23541 . - . ID=gene-AC57_RS10185;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AC57_RS10185;old_locus_tag=AC57_2890 NZ_JJLR01000103.1 Protein Homology CDS 23251 23541 . - 0 ID=cds-WP_001117838.1;Parent=gene-AC57_RS10185;Dbxref=GenBank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AC57_RS10185;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 23531 23968 . - . ID=gene-AC57_RS10180;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AC57_RS10180;old_locus_tag=AC57_2891 NZ_JJLR01000103.1 Protein Homology CDS 23531 23968 . - 0 ID=cds-WP_001300750.1;Parent=gene-AC57_RS10180;Dbxref=GenBank:WP_001300750.1;Name=WP_001300750.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AC57_RS10180;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001300750.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 24139 24621 . + . ID=gene-AC57_RS10175;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AC57_RS10175;old_locus_tag=AC57_2892 NZ_JJLR01000103.1 Protein Homology CDS 24139 24621 . + 0 ID=cds-WP_000162574.1;Parent=gene-AC57_RS10175;Dbxref=GenBank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AC57_RS10175;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 24836 25198 . + . ID=gene-AC57_RS26220;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AC57_RS26220 NZ_JJLR01000103.1 cmsearch tmRNA 24836 25198 . + . ID=rna-AC57_RS26220;Parent=gene-AC57_RS26220;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26220;product=transfer-messenger RNA NZ_JJLR01000103.1 cmsearch exon 24836 25198 . + . ID=exon-AC57_RS26220-1;Parent=rna-AC57_RS26220;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26220;product=transfer-messenger RNA NZ_JJLR01000103.1 RefSeq pseudogene 25359 28016 . - . ID=gene-AC57_RS29190;Name=ypjA;end_range=28016,.;gbkey=Gene;gene=ypjA;gene_biotype=pseudogene;locus_tag=AC57_RS29190;partial=true;pseudo=true NZ_JJLR01000103.1 Protein Homology CDS 25359 28016 . - 0 ID=cds-AC57_RS29190;Parent=gene-AC57_RS29190;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=28016,.;gbkey=CDS;gene=ypjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417134.2;locus_tag=AC57_RS29190;partial=true;product=adhesin-like autotransporter YpjA/EhaD;pseudo=true;transl_table=11 NZ_JJLR01000103.1 RefSeq gene 28065 28305 . + . ID=gene-AC57_RS0124715;Name=AC57_RS0124715;end_range=28305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124715;old_locus_tag=AC57_2894;partial=true NZ_JJLR01000103.1 Protein Homology CDS 28065 28305 . + 0 ID=cds-WP_000179208.1-3;Parent=gene-AC57_RS0124715;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;end_range=28305,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124715;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;transl_table=11 ##sequence-region NZ_JJLR01000104.1 1 716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000104.1 RefSeq region 1 716 . + . ID=NZ_JJLR01000104.1:1..716;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000104.1 RefSeq gene 1 672 . - . ID=gene-AC57_RS10170;Name=AC57_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10170;old_locus_tag=AC57_2895;partial=true;start_range=.,1 NZ_JJLR01000104.1 Protein Homology CDS 423 672 . - 0 ID=cds-WP_249401510.1;Parent=gene-AC57_RS10170;Dbxref=GenBank:WP_249401510.1;Name=WP_249401510.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS10170;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249401510.1;transl_table=11 NZ_JJLR01000104.1 Protein Homology CDS 1 423 . - 2 ID=cds-WP_249401510.1;Parent=gene-AC57_RS10170;Dbxref=GenBank:WP_249401510.1;Name=WP_249401510.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS10170;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_249401510.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000105.1 1 50496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000105.1 RefSeq region 1 50496 . + . ID=NZ_JJLR01000105.1:1..50496;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000105.1 RefSeq gene 1 234 . - . ID=gene-AC57_RS0124720;Name=AC57_RS0124720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124720;old_locus_tag=AC57_2896;partial=true;start_range=.,1 NZ_JJLR01000105.1 Protein Homology CDS 1 234 . - 0 ID=cds-WP_001408888.1-2;Parent=gene-AC57_RS0124720;Dbxref=GenBank:WP_001408888.1;Name=WP_001408888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124720;partial=true;product=IS1-like element transposase;protein_id=WP_001408888.1;start_range=.,1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 551 1528 . + . ID=gene-AC57_RS10165;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=AC57_RS10165;old_locus_tag=AC57_2897 NZ_JJLR01000105.1 Protein Homology CDS 551 1528 . + 0 ID=cds-WP_000993087.1;Parent=gene-AC57_RS10165;Dbxref=GenBank:WP_000993087.1;Name=WP_000993087.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311547.2;locus_tag=AC57_RS10165;product=glutarate dioxygenase GlaH;protein_id=WP_000993087.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 1547 2815 . + . ID=gene-AC57_RS10160;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AC57_RS10160;old_locus_tag=AC57_2898 NZ_JJLR01000105.1 Protein Homology CDS 1547 2815 . + 0 ID=cds-WP_000271962.1;Parent=gene-AC57_RS10160;Dbxref=GenBank:WP_000271962.1;Name=WP_000271962.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311548.2;locus_tag=AC57_RS10160;product=L-2-hydroxyglutarate oxidase;protein_id=WP_000271962.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 2838 4286 . + . ID=gene-AC57_RS10155;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AC57_RS10155;old_locus_tag=AC57_2899 NZ_JJLR01000105.1 Protein Homology CDS 2838 4286 . + 0 ID=cds-WP_000772820.1;Parent=gene-AC57_RS10155;Dbxref=GenBank:WP_000772820.1;Name=WP_000772820.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311549.1;locus_tag=AC57_RS10155;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_000772820.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 4300 5580 . + . ID=gene-AC57_RS10150;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AC57_RS10150;old_locus_tag=AC57_2900 NZ_JJLR01000105.1 Protein Homology CDS 4300 5580 . + 0 ID=cds-WP_000097662.1;Parent=gene-AC57_RS10150;Dbxref=GenBank:WP_000097662.1;Name=WP_000097662.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417148.1;locus_tag=AC57_RS10150;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_000097662.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 5818 7218 . + . ID=gene-AC57_RS10145;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AC57_RS10145;old_locus_tag=AC57_2901 NZ_JJLR01000105.1 Protein Homology CDS 5818 7218 . + 0 ID=cds-WP_001301367.1;Parent=gene-AC57_RS10145;Dbxref=GenBank:WP_001301367.1;Name=WP_001301367.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311551.1;locus_tag=AC57_RS10145;product=GABA permease;protein_id=WP_001301367.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 7239 7901 . + . ID=gene-AC57_RS10140;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AC57_RS10140;old_locus_tag=AC57_2902 NZ_JJLR01000105.1 Protein Homology CDS 7239 7901 . + 0 ID=cds-WP_000156811.1;Parent=gene-AC57_RS10140;Dbxref=GenBank:WP_000156811.1;Name=WP_000156811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AC57_RS10140;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156811.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 7902 8351 . - . ID=gene-AC57_RS10135;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AC57_RS10135;old_locus_tag=AC57_2903 NZ_JJLR01000105.1 Protein Homology CDS 7902 8351 . - 0 ID=cds-WP_000522415.1;Parent=gene-AC57_RS10135;Dbxref=GenBank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AC57_RS10135;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 8435 8593 . - . ID=gene-AC57_RS10130;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=AC57_RS10130;old_locus_tag=AC57_2904 NZ_JJLR01000105.1 Protein Homology CDS 8435 8593 . - 0 ID=cds-WP_000508177.1;Parent=gene-AC57_RS10130;Dbxref=GenBank:WP_000508177.1;Name=WP_000508177.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqaE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AC57_RS10130;product=YqaE/Pmp3 family membrane protein;protein_id=WP_000508177.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 8776 9075 . + . ID=gene-AC57_RS10125;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=AC57_RS10125;old_locus_tag=AC57_2905 NZ_JJLR01000105.1 Protein Homology CDS 8776 9075 . + 0 ID=cds-WP_000137280.1;Parent=gene-AC57_RS10125;Dbxref=GenBank:WP_000137280.1;Name=WP_000137280.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ygaV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417153.1;locus_tag=AC57_RS10125;product=ArsR/SmtB family transcription factor;protein_id=WP_000137280.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 9085 9609 . + . ID=gene-AC57_RS10120;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AC57_RS10120;old_locus_tag=AC57_2906 NZ_JJLR01000105.1 Protein Homology CDS 9085 9609 . + 0 ID=cds-WP_001229442.1;Parent=gene-AC57_RS10120;Dbxref=GenBank:WP_001229442.1;Name=WP_001229442.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417154.1;locus_tag=AC57_RS10120;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_001229442.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 9656 10060 . - . ID=gene-AC57_RS10115;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AC57_RS10115;old_locus_tag=AC57_2907 NZ_JJLR01000105.1 Protein Homology CDS 9656 10060 . - 0 ID=cds-WP_000115383.1;Parent=gene-AC57_RS10115;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AC57_RS10115;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 10728 11177 . + . ID=gene-AC57_RS10110;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AC57_RS10110;old_locus_tag=AC57_2908 NZ_JJLR01000105.1 Protein Homology CDS 10728 11177 . + 0 ID=cds-WP_000492656.1;Parent=gene-AC57_RS10110;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AC57_RS10110;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 11214 11558 . - . ID=gene-AC57_RS10105;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=AC57_RS10105;old_locus_tag=AC57_2909 NZ_JJLR01000105.1 Protein Homology CDS 11214 11558 . - 0 ID=cds-WP_000281320.1;Parent=gene-AC57_RS10105;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AC57_RS10105;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 11710 12039 . + . ID=gene-AC57_RS10100;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=AC57_RS10100;old_locus_tag=AC57_2910 NZ_JJLR01000105.1 Protein Homology CDS 11710 12039 . + 0 ID=cds-WP_001295174.1;Parent=gene-AC57_RS10100;Dbxref=GenBank:WP_001295174.1;Name=WP_001295174.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AC57_RS10100;product=DUF883 domain-containing protein;protein_id=WP_001295174.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 12287 12532 . + . ID=gene-AC57_RS10095;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AC57_RS10095;old_locus_tag=AC57_2911 NZ_JJLR01000105.1 Protein Homology CDS 12287 12532 . + 0 ID=cds-WP_001223227.1;Parent=gene-AC57_RS10095;Dbxref=GenBank:WP_001223227.1;Name=WP_001223227.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AC57_RS10095;product=glutaredoxin-like protein NrdH;protein_id=WP_001223227.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 12529 12939 . + . ID=gene-AC57_RS10090;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AC57_RS10090;old_locus_tag=AC57_2912 NZ_JJLR01000105.1 Protein Homology CDS 12529 12939 . + 0 ID=cds-WP_001397683.1;Parent=gene-AC57_RS10090;Dbxref=GenBank:WP_001397683.1;Name=WP_001397683.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AC57_RS10090;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001397683.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 12912 15056 . + . ID=gene-AC57_RS10085;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AC57_RS10085;old_locus_tag=AC57_2913 NZ_JJLR01000105.1 Protein Homology CDS 12912 15056 . + 0 ID=cds-WP_000246527.1;Parent=gene-AC57_RS10085;Dbxref=GenBank:WP_000246527.1;Name=WP_000246527.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AC57_RS10085;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_000246527.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 15066 16025 . + . ID=gene-AC57_RS10080;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AC57_RS10080;old_locus_tag=AC57_2914 NZ_JJLR01000105.1 Protein Homology CDS 15066 16025 . + 0 ID=cds-WP_000777969.1;Parent=gene-AC57_RS10080;Dbxref=GenBank:WP_000777969.1;Name=WP_000777969.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AC57_RS10080;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000777969.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 16379 17581 . + . ID=gene-AC57_RS10075;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AC57_RS10075;old_locus_tag=AC57_2915 NZ_JJLR01000105.1 Protein Homology CDS 16379 17581 . + 0 ID=cds-WP_032237195.1;Parent=gene-AC57_RS10075;Dbxref=GenBank:WP_032237195.1;Name=WP_032237195.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AC57_RS10075;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_032237195.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 17574 18638 . + . ID=gene-AC57_RS10070;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AC57_RS10070;old_locus_tag=AC57_2916 NZ_JJLR01000105.1 Protein Homology CDS 17574 18638 . + 0 ID=cds-WP_000774988.1;Parent=gene-AC57_RS10070;Dbxref=GenBank:WP_000774988.1;Name=WP_000774988.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=AC57_RS10070;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_000774988.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 18696 19688 . + . ID=gene-AC57_RS10065;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AC57_RS10065;old_locus_tag=AC57_2917 NZ_JJLR01000105.1 Protein Homology CDS 18696 19688 . + 0 ID=cds-WP_001216521.1;Parent=gene-AC57_RS10065;Dbxref=GenBank:WP_001216521.1;Name=WP_001216521.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AC57_RS10065;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216521.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 19880 21064 . + . ID=gene-AC57_RS10060;Name=AC57_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS10060;old_locus_tag=AC57_2920 NZ_JJLR01000105.1 Protein Homology CDS 19880 21064 . + 0 ID=cds-WP_000165680.1;Parent=gene-AC57_RS10060;Dbxref=GenBank:WP_000165680.1;Name=WP_000165680.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AC57_RS10060;product=MFS transporter;protein_id=WP_000165680.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 21188 21925 . + . ID=gene-AC57_RS10055;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AC57_RS10055;old_locus_tag=AC57_2921 NZ_JJLR01000105.1 Protein Homology CDS 21188 21925 . + 0 ID=cds-WP_000445651.1;Parent=gene-AC57_RS10055;Dbxref=GenBank:WP_000445651.1;Name=WP_000445651.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417167.1;locus_tag=AC57_RS10055;product=L-valine exporter subunit YgaZ;protein_id=WP_000445651.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 21915 22250 . + . ID=gene-AC57_RS10050;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AC57_RS10050;old_locus_tag=AC57_2922 NZ_JJLR01000105.1 Protein Homology CDS 21915 22250 . + 0 ID=cds-WP_000119763.1;Parent=gene-AC57_RS10050;Dbxref=GenBank:WP_000119763.1;Name=WP_000119763.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417168.1;locus_tag=AC57_RS10050;product=L-valine transporter subunit YgaH;protein_id=WP_000119763.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 22341 22871 . + . ID=gene-AC57_RS10045;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AC57_RS10045;old_locus_tag=AC57_2923 NZ_JJLR01000105.1 Protein Homology CDS 22341 22871 . + 0 ID=cds-WP_000378442.1;Parent=gene-AC57_RS10045;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AC57_RS10045;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 22998 24170 . + . ID=gene-AC57_RS10040;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AC57_RS10040;old_locus_tag=AC57_2925 NZ_JJLR01000105.1 Protein Homology CDS 22998 24170 . + 0 ID=cds-WP_032237193.1;Parent=gene-AC57_RS10040;Dbxref=GenBank:WP_032237193.1;Name=WP_032237193.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417170.1;locus_tag=AC57_RS10040;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_032237193.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 24187 25725 . + . ID=gene-AC57_RS10035;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AC57_RS10035;old_locus_tag=AC57_2926 NZ_JJLR01000105.1 Protein Homology CDS 24187 25725 . + 0 ID=cds-WP_001295176.1;Parent=gene-AC57_RS10035;Dbxref=GenBank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AC57_RS10035;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 25789 26304 . - . ID=gene-AC57_RS10030;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AC57_RS10030;old_locus_tag=AC57_2927 NZ_JJLR01000105.1 Protein Homology CDS 25789 26304 . - 0 ID=cds-WP_001130211.1;Parent=gene-AC57_RS10030;Dbxref=GenBank:WP_001130211.1;Name=WP_001130211.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AC57_RS10030;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 26454 28010 . - . ID=gene-AC57_RS10025;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AC57_RS10025;old_locus_tag=AC57_2928 NZ_JJLR01000105.1 Protein Homology CDS 26454 28010 . - 0 ID=cds-WP_000611812.1;Parent=gene-AC57_RS10025;Dbxref=GenBank:WP_000611812.1;Name=WP_000611812.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AC57_RS10025;product=glutamate--cysteine ligase;protein_id=WP_000611812.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 28083 28511 . - . ID=gene-AC57_RS10020;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AC57_RS10020;old_locus_tag=AC57_2929 NZ_JJLR01000105.1 Protein Homology CDS 28083 28511 . - 0 ID=cds-WP_001287454.1;Parent=gene-AC57_RS10020;Dbxref=GenBank:WP_001287454.1;Name=WP_001287454.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AC57_RS10020;product=YqaA family protein;protein_id=WP_001287454.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 28508 29074 . - . ID=gene-AC57_RS10015;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AC57_RS10015;old_locus_tag=AC57_2930 NZ_JJLR01000105.1 Protein Homology CDS 28508 29074 . - 0 ID=cds-WP_000273290.1;Parent=gene-AC57_RS10015;Dbxref=GenBank:WP_000273290.1;Name=WP_000273290.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417175.1;locus_tag=AC57_RS10015;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_000273290.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 29355 29431 . - . ID=gene-AC57_RS10010;Name=AC57_RS10010;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS10010;old_locus_tag=AC57_2931 NZ_JJLR01000105.1 tRNAscan-SE tRNA 29355 29431 . - . ID=rna-AC57_RS10010;Parent=gene-AC57_RS10010;anticodon=(pos:complement(29395..29397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10010;product=tRNA-Arg NZ_JJLR01000105.1 tRNAscan-SE exon 29355 29431 . - . ID=exon-AC57_RS10010-1;Parent=rna-AC57_RS10010;anticodon=(pos:complement(29395..29397));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10010;product=tRNA-Arg NZ_JJLR01000105.1 RefSeq gene 29630 29706 . - . ID=gene-AC57_RS10005;Name=AC57_RS10005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS10005;old_locus_tag=AC57_2932 NZ_JJLR01000105.1 tRNAscan-SE tRNA 29630 29706 . - . ID=rna-AC57_RS10005;Parent=gene-AC57_RS10005;anticodon=(pos:complement(29670..29672));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10005;product=tRNA-Arg NZ_JJLR01000105.1 tRNAscan-SE exon 29630 29706 . - . ID=exon-AC57_RS10005-1;Parent=rna-AC57_RS10005;anticodon=(pos:complement(29670..29672));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10005;product=tRNA-Arg NZ_JJLR01000105.1 RefSeq gene 29769 29845 . - . ID=gene-AC57_RS10000;Name=AC57_RS10000;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS10000;old_locus_tag=AC57_2933 NZ_JJLR01000105.1 tRNAscan-SE tRNA 29769 29845 . - . ID=rna-AC57_RS10000;Parent=gene-AC57_RS10000;anticodon=(pos:complement(29809..29811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10000;product=tRNA-Arg NZ_JJLR01000105.1 tRNAscan-SE exon 29769 29845 . - . ID=exon-AC57_RS10000-1;Parent=rna-AC57_RS10000;anticodon=(pos:complement(29809..29811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS10000;product=tRNA-Arg NZ_JJLR01000105.1 RefSeq gene 29908 29984 . - . ID=gene-AC57_RS09995;Name=AC57_RS09995;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09995;old_locus_tag=AC57_2934 NZ_JJLR01000105.1 tRNAscan-SE tRNA 29908 29984 . - . ID=rna-AC57_RS09995;Parent=gene-AC57_RS09995;anticodon=(pos:complement(29948..29950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09995;product=tRNA-Arg NZ_JJLR01000105.1 tRNAscan-SE exon 29908 29984 . - . ID=exon-AC57_RS09995-1;Parent=rna-AC57_RS09995;anticodon=(pos:complement(29948..29950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09995;product=tRNA-Arg NZ_JJLR01000105.1 RefSeq gene 30047 30123 . - . ID=gene-AC57_RS09990;Name=AC57_RS09990;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09990;old_locus_tag=AC57_2935 NZ_JJLR01000105.1 tRNAscan-SE tRNA 30047 30123 . - . ID=rna-AC57_RS09990;Parent=gene-AC57_RS09990;anticodon=(pos:complement(30087..30089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09990;product=tRNA-Arg NZ_JJLR01000105.1 tRNAscan-SE exon 30047 30123 . - . ID=exon-AC57_RS09990-1;Parent=rna-AC57_RS09990;anticodon=(pos:complement(30087..30089));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09990;product=tRNA-Arg NZ_JJLR01000105.1 RefSeq gene 30322 30398 . - . ID=gene-AC57_RS09985;Name=AC57_RS09985;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09985;old_locus_tag=AC57_2936 NZ_JJLR01000105.1 tRNAscan-SE tRNA 30322 30398 . - . ID=rna-AC57_RS09985;Parent=gene-AC57_RS09985;anticodon=(pos:complement(30362..30364));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09985;product=tRNA-Arg NZ_JJLR01000105.1 tRNAscan-SE exon 30322 30398 . - . ID=exon-AC57_RS09985-1;Parent=rna-AC57_RS09985;anticodon=(pos:complement(30362..30364));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09985;product=tRNA-Arg NZ_JJLR01000105.1 RefSeq gene 30402 30494 . - . ID=gene-AC57_RS09980;Name=AC57_RS09980;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09980;old_locus_tag=AC57_2937 NZ_JJLR01000105.1 tRNAscan-SE tRNA 30402 30494 . - . ID=rna-AC57_RS09980;Parent=gene-AC57_RS09980;anticodon=(pos:complement(30458..30460));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09980;product=tRNA-Ser NZ_JJLR01000105.1 tRNAscan-SE exon 30402 30494 . - . ID=exon-AC57_RS09980-1;Parent=rna-AC57_RS09980;anticodon=(pos:complement(30458..30460));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09980;product=tRNA-Ser NZ_JJLR01000105.1 RefSeq gene 30810 30995 . - . ID=gene-AC57_RS09975;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AC57_RS09975;old_locus_tag=AC57_2938 NZ_JJLR01000105.1 Protein Homology CDS 30810 30995 . - 0 ID=cds-WP_000906486.1;Parent=gene-AC57_RS09975;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AC57_RS09975;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 31230 33860 . - . ID=gene-AC57_RS09970;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AC57_RS09970;old_locus_tag=AC57_2940 NZ_JJLR01000105.1 Protein Homology CDS 31230 33860 . - 0 ID=cds-WP_000047184.1;Parent=gene-AC57_RS09970;Dbxref=GenBank:WP_000047184.1;Name=WP_000047184.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417177.1;locus_tag=AC57_RS09970;product=alanine--tRNA ligase;protein_id=WP_000047184.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 33988 34488 . - . ID=gene-AC57_RS09960;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AC57_RS09960;old_locus_tag=AC57_2942 NZ_JJLR01000105.1 Protein Homology CDS 33988 34488 . - 0 ID=cds-WP_000140508.1;Parent=gene-AC57_RS09960;Dbxref=GenBank:WP_000140508.1;Name=WP_000140508.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417178.1;locus_tag=AC57_RS09960;product=recombination regulator RecX;protein_id=WP_000140508.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 34557 35618 . - . ID=gene-AC57_RS09955;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AC57_RS09955;old_locus_tag=AC57_2943 NZ_JJLR01000105.1 Protein Homology CDS 34557 35618 . - 0 ID=cds-WP_000963143.1;Parent=gene-AC57_RS09955;Dbxref=GenBank:WP_000963143.1;Name=WP_000963143.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AC57_RS09955;product=recombinase RecA;protein_id=WP_000963143.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 35698 36195 . - . ID=gene-AC57_RS09950;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AC57_RS09950;old_locus_tag=AC57_2944 NZ_JJLR01000105.1 Protein Homology CDS 35698 36195 . - 0 ID=cds-WP_000132231.1;Parent=gene-AC57_RS09950;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AC57_RS09950;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 36340 37425 . - . ID=gene-AC57_RS09945;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AC57_RS09945;old_locus_tag=AC57_2945 NZ_JJLR01000105.1 Protein Homology CDS 36340 37425 . - 0 ID=cds-WP_001295177.1;Parent=gene-AC57_RS09945;Dbxref=GenBank:WP_001295177.1;Name=WP_001295177.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AC57_RS09945;product=lytic murein transglycosylase B;protein_id=WP_001295177.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 37681 38244 . + . ID=gene-AC57_RS09940;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AC57_RS09940;old_locus_tag=AC57_2946 NZ_JJLR01000105.1 Protein Homology CDS 37681 38244 . + 0 ID=cds-WP_000573321.1;Parent=gene-AC57_RS09940;Dbxref=GenBank:WP_000573321.1;Name=WP_000573321.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AC57_RS09940;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573321.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 38241 39200 . + . ID=gene-AC57_RS09935;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AC57_RS09935;old_locus_tag=AC57_2947 NZ_JJLR01000105.1 Protein Homology CDS 38241 39200 . + 0 ID=cds-WP_000148878.1;Parent=gene-AC57_RS09935;Dbxref=GenBank:WP_000148878.1;Name=WP_000148878.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026181.1;locus_tag=AC57_RS09935;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000148878.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 39211 39582 . + . ID=gene-AC57_RS09930;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AC57_RS09930;old_locus_tag=AC57_2948 NZ_JJLR01000105.1 Protein Homology CDS 39211 39582 . + 0 ID=cds-WP_000216194.1;Parent=gene-AC57_RS09930;Dbxref=GenBank:WP_000216194.1;Name=WP_000216194.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417184.1;locus_tag=AC57_RS09930;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216194.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 39586 40365 . + . ID=gene-AC57_RS09925;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AC57_RS09925;old_locus_tag=AC57_2949 NZ_JJLR01000105.1 Protein Homology CDS 39586 40365 . + 0 ID=cds-WP_001077358.1;Parent=gene-AC57_RS09925;Dbxref=GenBank:WP_001077358.1;Name=WP_001077358.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AC57_RS09925;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077358.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 40470 40790 . + . ID=gene-AC57_RS09920;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AC57_RS09920;old_locus_tag=AC57_2950 NZ_JJLR01000105.1 Protein Homology CDS 40470 40790 . + 0 ID=cds-WP_050440081.1;Parent=gene-AC57_RS09920;Dbxref=GenBank:WP_050440081.1;Name=WP_050440081.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417186.1;locus_tag=AC57_RS09920;product=transcriptional regulator GutM;protein_id=WP_050440081.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 40896 41669 . + . ID=gene-AC57_RS09915;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AC57_RS09915;old_locus_tag=AC57_2951 NZ_JJLR01000105.1 Protein Homology CDS 40896 41669 . + 0 ID=cds-WP_000804550.1;Parent=gene-AC57_RS09915;Dbxref=GenBank:WP_000804550.1;Name=WP_000804550.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=AC57_RS09915;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_000804550.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 41662 42627 . + . ID=gene-AC57_RS09910;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AC57_RS09910;old_locus_tag=AC57_2952 NZ_JJLR01000105.1 Protein Homology CDS 41662 42627 . + 0 ID=cds-WP_001287420.1;Parent=gene-AC57_RS09910;Dbxref=GenBank:WP_001287420.1;Name=WP_001287420.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AC57_RS09910;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_001287420.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 42624 44138 . - . ID=gene-AC57_RS09905;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AC57_RS09905;old_locus_tag=AC57_2953 NZ_JJLR01000105.1 Protein Homology CDS 42624 44138 . - 0 ID=cds-WP_000010749.1;Parent=gene-AC57_RS09905;Dbxref=GenBank:WP_000010749.1;Name=WP_000010749.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417189.2;locus_tag=AC57_RS09905;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_000010749.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 44325 45764 . + . ID=gene-AC57_RS09900;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AC57_RS09900;old_locus_tag=AC57_2954 NZ_JJLR01000105.1 Protein Homology CDS 44325 45764 . + 0 ID=cds-WP_032279708.1;Parent=gene-AC57_RS09900;Dbxref=GenBank:WP_032279708.1;Name=WP_032279708.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417190.1;locus_tag=AC57_RS09900;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_032279708.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 45761 46894 . + . ID=gene-AC57_RS09895;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AC57_RS09895;old_locus_tag=AC57_2955 NZ_JJLR01000105.1 Protein Homology CDS 45761 46894 . + 0 ID=cds-WP_032279707.1;Parent=gene-AC57_RS09895;Dbxref=GenBank:WP_032279707.1;Name=WP_032279707.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AC57_RS09895;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_032279707.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 47022 49274 . - . ID=gene-AC57_RS09890;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AC57_RS09890;old_locus_tag=AC57_2956 NZ_JJLR01000105.1 Protein Homology CDS 47022 49274 . - 0 ID=cds-WP_032170119.1;Parent=gene-AC57_RS09890;Dbxref=GenBank:WP_032170119.1;Name=WP_032170119.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417192.1;locus_tag=AC57_RS09890;product=carbamoyltransferase HypF;protein_id=WP_032170119.1;transl_table=11 NZ_JJLR01000105.1 RefSeq gene 49427 49954 . - . ID=gene-AC57_RS09885;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AC57_RS09885;old_locus_tag=AC57_2957 NZ_JJLR01000105.1 Protein Homology CDS 49427 49954 . - 0 ID=cds-WP_001078777.1;Parent=gene-AC57_RS09885;Dbxref=GenBank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AC57_RS09885;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JJLR01000105.1 RefSeq pseudogene 50103 50174 . - . ID=gene-AC57_RS30795;Name=AC57_RS30795;end_range=50174,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30795;partial=true;pseudo=true NZ_JJLR01000105.1 Protein Homology CDS 50103 50174 . - 0 ID=cds-AC57_RS30795;Parent=gene-AC57_RS30795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=50174,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AC57_RS30795;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000105.1 RefSeq pseudogene 50231 50496 . + . ID=gene-AC57_RS09880;Name=AC57_RS09880;end_range=50496,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS09880;old_locus_tag=AC57_2959;partial=true;pseudo=true NZ_JJLR01000105.1 Protein Homology CDS 50231 50496 . + 0 ID=cds-AC57_RS09880;Parent=gene-AC57_RS09880;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=50496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS09880;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000106.1 1 49363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000106.1 RefSeq region 1 49363 . + . ID=NZ_JJLR01000106.1:1..49363;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000106.1 RefSeq gene 1 91 . + . ID=gene-AC57_RS30800;Name=AC57_RS30800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30800;partial=true;start_range=.,1 NZ_JJLR01000106.1 Protein Homology CDS 1 91 . + 1 ID=cds-WP_024171551.1;Parent=gene-AC57_RS30800;Dbxref=GenBank:WP_024171551.1;Name=WP_024171551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30800;partial=true;product=hypothetical protein;protein_id=WP_024171551.1;start_range=.,1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 251 1210 . - . ID=gene-AC57_RS09875;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AC57_RS09875;old_locus_tag=AC57_2960 NZ_JJLR01000106.1 Protein Homology CDS 251 1210 . - 0 ID=cds-WP_050440082.1;Parent=gene-AC57_RS09875;Dbxref=GenBank:WP_050440082.1;Name=WP_050440082.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AC57_RS09875;product=DNA-binding transcriptional regulator AscG;protein_id=WP_050440082.1;transl_table=11 NZ_JJLR01000106.1 RefSeq pseudogene 1470 2925 . + . ID=gene-AC57_RS09870;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=pseudogene;locus_tag=AC57_RS09870;old_locus_tag=AC57_2962;pseudo=true NZ_JJLR01000106.1 Protein Homology CDS 1470 2925 . + 0 ID=cds-AC57_RS09870;Parent=gene-AC57_RS09870;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AC57_RS09870;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;pseudo=true;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 2934 4358 . + . ID=gene-AC57_RS09865;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AC57_RS09865;old_locus_tag=AC57_2963 NZ_JJLR01000106.1 Protein Homology CDS 2934 4358 . + 0 ID=cds-WP_000110363.1;Parent=gene-AC57_RS09865;Dbxref=GenBank:WP_000110363.1;Name=WP_000110363.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AC57_RS09865;product=6-phospho-beta-glucosidase AscB;protein_id=WP_000110363.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 4516 4986 . - . ID=gene-AC57_RS09860;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AC57_RS09860;old_locus_tag=AC57_2964 NZ_JJLR01000106.1 Protein Homology CDS 4516 4986 . - 0 ID=cds-WP_000132961.1;Parent=gene-AC57_RS09860;Dbxref=GenBank:WP_000132961.1;Name=WP_000132961.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311600.1;locus_tag=AC57_RS09860;product=hydrogenase maturation peptidase HycI;protein_id=WP_000132961.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 4979 5389 . - . ID=gene-AC57_RS09855;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AC57_RS09855;old_locus_tag=AC57_2965 NZ_JJLR01000106.1 Protein Homology CDS 4979 5389 . - 0 ID=cds-WP_001291921.1;Parent=gene-AC57_RS09855;Dbxref=GenBank:WP_001291921.1;Name=WP_001291921.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AC57_RS09855;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291921.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 5386 6153 . - . ID=gene-AC57_RS09850;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AC57_RS09850;old_locus_tag=AC57_2966 NZ_JJLR01000106.1 Protein Homology CDS 5386 6153 . - 0 ID=cds-WP_000067392.1;Parent=gene-AC57_RS09850;Dbxref=GenBank:WP_000067392.1;Name=WP_000067392.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417199.1;locus_tag=AC57_RS09850;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067392.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 6153 6695 . - . ID=gene-AC57_RS09845;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AC57_RS09845;old_locus_tag=AC57_2967 NZ_JJLR01000106.1 Protein Homology CDS 6153 6695 . - 0 ID=cds-WP_032279711.1;Parent=gene-AC57_RS09845;Dbxref=GenBank:WP_032279711.1;Name=WP_032279711.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311603.1;locus_tag=AC57_RS09845;product=formate hydrogenlyase subunit HycF;protein_id=WP_032279711.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 6705 8414 . - . ID=gene-AC57_RS09840;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AC57_RS09840;old_locus_tag=AC57_2968 NZ_JJLR01000106.1 Protein Homology CDS 6705 8414 . - 0 ID=cds-WP_001288122.1;Parent=gene-AC57_RS09840;Dbxref=GenBank:WP_001288122.1;Name=WP_001288122.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AC57_RS09840;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288122.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 8432 9355 . - . ID=gene-AC57_RS09835;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AC57_RS09835;old_locus_tag=AC57_2969 NZ_JJLR01000106.1 Protein Homology CDS 8432 9355 . - 0 ID=cds-WP_001521216.1;Parent=gene-AC57_RS09835;Dbxref=GenBank:WP_001521216.1;Name=WP_001521216.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417202.1;locus_tag=AC57_RS09835;product=formate hydrogenlyase subunit HycD;protein_id=WP_001521216.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 9358 11184 . - . ID=gene-AC57_RS09830;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AC57_RS09830;old_locus_tag=AC57_2970 NZ_JJLR01000106.1 Protein Homology CDS 9358 11184 . - 0 ID=cds-WP_001274386.1;Parent=gene-AC57_RS09830;Dbxref=GenBank:WP_001274386.1;Name=WP_001274386.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417203.1;locus_tag=AC57_RS09830;product=formate hydrogenlyase subunit 3;protein_id=WP_001274386.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 11181 11792 . - . ID=gene-AC57_RS09825;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AC57_RS09825;old_locus_tag=AC57_2971 NZ_JJLR01000106.1 Protein Homology CDS 11181 11792 . - 0 ID=cds-WP_001079186.1;Parent=gene-AC57_RS09825;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AC57_RS09825;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 11917 12378 . - . ID=gene-AC57_RS09820;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AC57_RS09820;old_locus_tag=AC57_2972 NZ_JJLR01000106.1 Protein Homology CDS 11917 12378 . - 0 ID=cds-WP_000158056.1;Parent=gene-AC57_RS09820;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AC57_RS09820;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 12590 12940 . + . ID=gene-AC57_RS09815;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AC57_RS09815;old_locus_tag=AC57_2973 NZ_JJLR01000106.1 Protein Homology CDS 12590 12940 . + 0 ID=cds-WP_001299100.1;Parent=gene-AC57_RS09815;Dbxref=GenBank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AC57_RS09815;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 12944 13816 . + . ID=gene-AC57_RS09810;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AC57_RS09810;old_locus_tag=AC57_2974 NZ_JJLR01000106.1 Protein Homology CDS 12944 13816 . + 0 ID=cds-WP_032279710.1;Parent=gene-AC57_RS09810;Dbxref=GenBank:WP_032279710.1;Name=WP_032279710.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AC57_RS09810;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_032279710.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 13807 14079 . + . ID=gene-AC57_RS09805;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AC57_RS09805;old_locus_tag=AC57_2975 NZ_JJLR01000106.1 Protein Homology CDS 13807 14079 . + 0 ID=cds-WP_032237190.1;Parent=gene-AC57_RS09805;Dbxref=GenBank:WP_032237190.1;Name=WP_032237190.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AC57_RS09805;product=hydrogenase 3 maturation protein HypC;protein_id=WP_032237190.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 14079 15200 . + . ID=gene-AC57_RS09800;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AC57_RS09800;old_locus_tag=AC57_2976 NZ_JJLR01000106.1 Protein Homology CDS 14079 15200 . + 0 ID=cds-WP_001212985.1;Parent=gene-AC57_RS09800;Dbxref=GenBank:WP_001212985.1;Name=WP_001212985.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417209.1;locus_tag=AC57_RS09800;product=hydrogenase formation protein HypD;protein_id=WP_001212985.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 15197 16207 . + . ID=gene-AC57_RS09795;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AC57_RS09795;old_locus_tag=AC57_2977 NZ_JJLR01000106.1 Protein Homology CDS 15197 16207 . + 0 ID=cds-WP_001059922.1;Parent=gene-AC57_RS09795;Dbxref=GenBank:WP_001059922.1;Name=WP_001059922.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=AC57_RS09795;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_001059922.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 16281 18359 . + . ID=gene-AC57_RS09790;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AC57_RS09790;old_locus_tag=AC57_2978 NZ_JJLR01000106.1 Protein Homology CDS 16281 18359 . + 0 ID=cds-WP_001618802.1;Parent=gene-AC57_RS09790;Dbxref=GenBank:WP_001618802.1;Name=WP_001618802.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417211.1;locus_tag=AC57_RS09790;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_001618802.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 18396 18749 . - . ID=gene-AC57_RS09785;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AC57_RS09785;old_locus_tag=AC57_2979 NZ_JJLR01000106.1 Protein Homology CDS 18396 18749 . - 0 ID=cds-WP_000015497.1;Parent=gene-AC57_RS09785;Dbxref=GenBank:WP_000015497.1;Name=WP_000015497.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417212.1;locus_tag=AC57_RS09785;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015497.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 18826 18960 . - . ID=gene-AC57_RS30305;Name=AC57_RS30305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30305;old_locus_tag=AC57_2980 NZ_JJLR01000106.1 Protein Homology CDS 18826 18960 . - 0 ID=cds-WP_000611932.1;Parent=gene-AC57_RS30305;Dbxref=GenBank:WP_000611932.1;Name=WP_000611932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439274.1;locus_tag=AC57_RS30305;product=hypothetical protein;protein_id=WP_000611932.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 19036 21597 . + . ID=gene-AC57_RS09780;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AC57_RS09780;old_locus_tag=AC57_2981 NZ_JJLR01000106.1 Protein Homology CDS 19036 21597 . + 0 ID=cds-WP_001272928.1;Parent=gene-AC57_RS09780;Dbxref=GenBank:WP_001272928.1;Name=WP_001272928.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417213.1;locus_tag=AC57_RS09780;product=DNA mismatch repair protein MutS;protein_id=WP_001272928.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 21703 22359 . + . ID=gene-AC57_RS09775;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AC57_RS09775;old_locus_tag=AC57_2982 NZ_JJLR01000106.1 Protein Homology CDS 21703 22359 . + 0 ID=cds-WP_001141322.1;Parent=gene-AC57_RS09775;Dbxref=GenBank:WP_001141322.1;Name=WP_001141322.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417214.1;locus_tag=AC57_RS09775;product=protein-serine/threonine phosphatase;protein_id=WP_001141322.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 22410 23177 . - . ID=gene-AC57_RS09770;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AC57_RS09770;old_locus_tag=AC57_2983 NZ_JJLR01000106.1 Protein Homology CDS 22410 23177 . - 0 ID=cds-WP_001300386.1;Parent=gene-AC57_RS09770;Dbxref=GenBank:WP_001300386.1;Name=WP_001300386.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AC57_RS09770;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_001300386.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 23373 24281 . + . ID=gene-AC57_RS09765;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AC57_RS09765;old_locus_tag=AC57_2984 NZ_JJLR01000106.1 Protein Homology CDS 23373 24281 . + 0 ID=cds-WP_000847985.1;Parent=gene-AC57_RS09765;Dbxref=GenBank:WP_000847985.1;Name=WP_000847985.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AC57_RS09765;product=L-threonate dehydrogenase;protein_id=WP_000847985.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 24278 25540 . + . ID=gene-AC57_RS09760;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AC57_RS09760;old_locus_tag=AC57_2985 NZ_JJLR01000106.1 Protein Homology CDS 24278 25540 . + 0 ID=cds-WP_032237187.1;Parent=gene-AC57_RS09760;Dbxref=GenBank:WP_032237187.1;Name=WP_032237187.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AC57_RS09760;product=3-oxo-tetronate kinase;protein_id=WP_032237187.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 25537 26175 . + . ID=gene-AC57_RS09755;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=AC57_RS09755;old_locus_tag=AC57_2986 NZ_JJLR01000106.1 Protein Homology CDS 25537 26175 . + 0 ID=cds-WP_001278994.1;Parent=gene-AC57_RS09755;Dbxref=GenBank:WP_001278994.1;Name=WP_001278994.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AC57_RS09755;product=aldolase;protein_id=WP_001278994.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 26180 26956 . + . ID=gene-AC57_RS09750;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AC57_RS09750;old_locus_tag=AC57_2987 NZ_JJLR01000106.1 Protein Homology CDS 26180 26956 . + 0 ID=cds-WP_001136934.1;Parent=gene-AC57_RS09750;Dbxref=GenBank:WP_001136934.1;Name=WP_001136934.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AC57_RS09750;product=HPr family phosphocarrier protein;protein_id=WP_001136934.1;transl_table=11 NZ_JJLR01000106.1 RefSeq pseudogene 27045 28409 . + . ID=gene-AC57_RS09745;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=pseudogene;locus_tag=AC57_RS09745;old_locus_tag=AC57_2988;pseudo=true NZ_JJLR01000106.1 Protein Homology CDS 27045 28409 . + 0 ID=cds-AC57_RS09745;Parent=gene-AC57_RS09745;Note=internal stop;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AC57_RS09745;product=GntP family transporter;pseudo=true;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 28503 29495 . - . ID=gene-AC57_RS09740;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=AC57_RS09740;old_locus_tag=AC57_2989 NZ_JJLR01000106.1 Protein Homology CDS 28503 29495 . - 0 ID=cds-WP_000081550.1;Parent=gene-AC57_RS09740;Dbxref=GenBank:WP_000081550.1;Name=WP_000081550.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AC57_RS09740;product=RNA polymerase sigma factor RpoS;protein_id=WP_000081550.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 29558 30652 . - . ID=gene-AC57_RS09735;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AC57_RS09735;old_locus_tag=AC57_2990 NZ_JJLR01000106.1 Protein Homology CDS 29558 30652 . - 0 ID=cds-WP_224692580.1;Parent=gene-AC57_RS09735;Dbxref=GenBank:WP_224692580.1;Name=WP_224692580.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AC57_RS09735;product=murein hydrolase activator NlpD;protein_id=WP_224692580.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 30837 31463 . - . ID=gene-AC57_RS09730;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AC57_RS09730;old_locus_tag=AC57_2991 NZ_JJLR01000106.1 Protein Homology CDS 30837 31463 . - 0 ID=cds-WP_000254708.1;Parent=gene-AC57_RS09730;Dbxref=GenBank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AC57_RS09730;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 31457 32218 . - . ID=gene-AC57_RS09725;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AC57_RS09725;old_locus_tag=AC57_2992 NZ_JJLR01000106.1 Protein Homology CDS 31457 32218 . - 0 ID=cds-WP_032237184.1;Parent=gene-AC57_RS09725;Dbxref=GenBank:WP_032237184.1;Name=WP_032237184.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AC57_RS09725;product=5'/3'-nucleotidase SurE;protein_id=WP_032237184.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 32199 33248 . - . ID=gene-AC57_RS09720;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AC57_RS09720;old_locus_tag=AC57_2993 NZ_JJLR01000106.1 Protein Homology CDS 32199 33248 . - 0 ID=cds-WP_000568943.1;Parent=gene-AC57_RS09720;Dbxref=GenBank:WP_000568943.1;Name=WP_000568943.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417225.1;locus_tag=AC57_RS09720;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_000568943.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 33245 33724 . - . ID=gene-AC57_RS09715;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AC57_RS09715;old_locus_tag=AC57_2994 NZ_JJLR01000106.1 Protein Homology CDS 33245 33724 . - 0 ID=cds-WP_001219242.1;Parent=gene-AC57_RS09715;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AC57_RS09715;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 33724 34434 . - . ID=gene-AC57_RS09710;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AC57_RS09710;old_locus_tag=AC57_2995 NZ_JJLR01000106.1 Protein Homology CDS 33724 34434 . - 0 ID=cds-WP_000246138.1;Parent=gene-AC57_RS09710;Dbxref=GenBank:WP_000246138.1;Name=WP_000246138.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AC57_RS09710;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 34453 34764 . - . ID=gene-AC57_RS09705;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AC57_RS09705;old_locus_tag=AC57_2996 NZ_JJLR01000106.1 Protein Homology CDS 34453 34764 . - 0 ID=cds-WP_000517476.1;Parent=gene-AC57_RS09705;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AC57_RS09705;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 34958 35281 . - . ID=gene-AC57_RS09700;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AC57_RS09700;old_locus_tag=AC57_2997 NZ_JJLR01000106.1 Protein Homology CDS 34958 35281 . - 0 ID=cds-WP_001246104.1;Parent=gene-AC57_RS09700;Dbxref=GenBank:WP_001246104.1;Name=WP_001246104.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417229.1;locus_tag=AC57_RS09700;product=DUF3561 family protein;protein_id=WP_001246104.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 35331 35936 . - . ID=gene-AC57_RS09695;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AC57_RS09695;old_locus_tag=AC57_2998 NZ_JJLR01000106.1 Protein Homology CDS 35331 35936 . - 0 ID=cds-WP_001173676.1;Parent=gene-AC57_RS09695;Dbxref=GenBank:WP_001173676.1;Name=WP_001173676.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AC57_RS09695;product=adenylyl-sulfate kinase;protein_id=WP_001173676.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 35936 37363 . - . ID=gene-AC57_RS09690;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AC57_RS09690;old_locus_tag=AC57_2999 NZ_JJLR01000106.1 Protein Homology CDS 35936 37363 . - 0 ID=cds-WP_001425962.1;Parent=gene-AC57_RS09690;Dbxref=GenBank:WP_001425962.1;Name=WP_001425962.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AC57_RS09690;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001425962.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 37365 38273 . - . ID=gene-AC57_RS09685;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AC57_RS09685;old_locus_tag=AC57_3000 NZ_JJLR01000106.1 Protein Homology CDS 37365 38273 . - 0 ID=cds-WP_000372108.1;Parent=gene-AC57_RS09685;Dbxref=GenBank:WP_000372108.1;Name=WP_000372108.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AC57_RS09685;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372108.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 38525 39562 . + . ID=gene-AC57_RS09680;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AC57_RS09680;old_locus_tag=AC57_3001 NZ_JJLR01000106.1 Protein Homology CDS 38525 39562 . + 0 ID=cds-WP_032237183.1;Parent=gene-AC57_RS09680;Dbxref=GenBank:WP_032237183.1;Name=WP_032237183.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AC57_RS09680;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_032237183.1;transl_table=11 NZ_JJLR01000106.1 RefSeq direct_repeat 39644 40221 . + . ID=id-NZ_JJLR01000106.1:39644..40221;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=39644..39672;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_JJLR01000106.1 RefSeq gene 40318 40611 . - . ID=gene-AC57_RS09675;Name=cas2e;gbkey=Gene;gene=cas2e;gene_biotype=protein_coding;locus_tag=AC57_RS09675;old_locus_tag=AC57_3004 NZ_JJLR01000106.1 Protein Homology CDS 40318 40611 . - 0 ID=cds-WP_000061856.1;Parent=gene-AC57_RS09675;Dbxref=GenBank:WP_000061856.1;Name=WP_000061856.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2e;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311635.1;locus_tag=AC57_RS09675;product=type I-E CRISPR-associated endoribonuclease Cas2e;protein_id=WP_000061856.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 40608 41531 . - . ID=gene-AC57_RS09670;Name=cas1e;gbkey=Gene;gene=cas1e;gene_biotype=protein_coding;locus_tag=AC57_RS09670;old_locus_tag=AC57_3005 NZ_JJLR01000106.1 Protein Homology CDS 40608 41531 . - 0 ID=cds-WP_000144854.1;Parent=gene-AC57_RS09670;Dbxref=GenBank:WP_000144854.1;Name=WP_000144854.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1e;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311636.1;locus_tag=AC57_RS09670;product=type I-E CRISPR-associated endonuclease Cas1e;protein_id=WP_000144854.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 41528 42178 . - . ID=gene-AC57_RS09665;Name=cas6e;gbkey=Gene;gene=cas6e;gene_biotype=protein_coding;locus_tag=AC57_RS09665;old_locus_tag=AC57_3006 NZ_JJLR01000106.1 Protein Homology CDS 41528 42178 . - 0 ID=cds-WP_000281461.1;Parent=gene-AC57_RS09665;Dbxref=GenBank:WP_000281461.1;Name=WP_000281461.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas6e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000281458.1;locus_tag=AC57_RS09665;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_000281461.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 42160 42906 . - . ID=gene-AC57_RS09660;Name=cas5e;gbkey=Gene;gene=cas5e;gene_biotype=protein_coding;locus_tag=AC57_RS09660;old_locus_tag=AC57_3007 NZ_JJLR01000106.1 Protein Homology CDS 42160 42906 . - 0 ID=cds-WP_000085073.1;Parent=gene-AC57_RS09660;Dbxref=GenBank:WP_000085073.1;Name=WP_000085073.1;Ontology_term=GO:0043571,GO:0051607,GO:0003723;gbkey=CDS;gene=cas5e;go_function=RNA binding|0003723||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311638.1;locus_tag=AC57_RS09660;product=type I-E CRISPR-associated protein Cas5/CasD;protein_id=WP_000085073.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 42917 43972 . - . ID=gene-AC57_RS09655;Name=cas7e;gbkey=Gene;gene=cas7e;gene_biotype=protein_coding;locus_tag=AC57_RS09655;old_locus_tag=AC57_3008 NZ_JJLR01000106.1 Protein Homology CDS 42917 43972 . - 0 ID=cds-WP_000206450.1;Parent=gene-AC57_RS09655;Dbxref=GenBank:WP_000206450.1;Name=WP_000206450.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7e;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311639.1;locus_tag=AC57_RS09655;product=type I-E CRISPR-associated protein Cas7/Cse4/CasC;protein_id=WP_000206450.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 43984 44520 . - . ID=gene-AC57_RS09650;Name=casB;gbkey=Gene;gene=casB;gene_biotype=protein_coding;gene_synonym=cse2;locus_tag=AC57_RS09650;old_locus_tag=AC57_3009 NZ_JJLR01000106.1 Protein Homology CDS 43984 44520 . - 0 ID=cds-WP_000029329.1;Parent=gene-AC57_RS09650;Dbxref=GenBank:WP_000029329.1;Name=WP_000029329.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casB;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311640.1;locus_tag=AC57_RS09650;product=type I-E CRISPR-associated protein Cse2/CasB;protein_id=WP_000029329.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 44517 46079 . - . ID=gene-AC57_RS09645;Name=casA;gbkey=Gene;gene=casA;gene_biotype=protein_coding;gene_synonym=cse1;locus_tag=AC57_RS09645;old_locus_tag=AC57_3010 NZ_JJLR01000106.1 Protein Homology CDS 44517 46079 . - 0 ID=cds-WP_032237182.1;Parent=gene-AC57_RS09645;Dbxref=GenBank:WP_032237182.1;Name=WP_032237182.1;Ontology_term=GO:0043571;gbkey=CDS;gene=casA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311641.1;locus_tag=AC57_RS09645;product=type I-E CRISPR-associated protein Cse1/CasA;protein_id=WP_032237182.1;transl_table=11 NZ_JJLR01000106.1 RefSeq gene 46177 48876 . - . ID=gene-AC57_RS09640;Name=AC57_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS09640;old_locus_tag=AC57_3011 NZ_JJLR01000106.1 Protein Homology CDS 46177 48876 . - 0 ID=cds-WP_001233949.1;Parent=gene-AC57_RS09640;Dbxref=GenBank:WP_001233949.1;Name=WP_001233949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233973.1;locus_tag=AC57_RS09640;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=WP_001233949.1;transl_table=11 NZ_JJLR01000106.1 RefSeq pseudogene 49115 49363 . + . ID=gene-AC57_RS09635;Name=AC57_RS09635;end_range=49363,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS09635;old_locus_tag=AC57_3012;partial=true;pseudo=true NZ_JJLR01000106.1 Protein Homology CDS 49115 49363 . + 0 ID=cds-AC57_RS09635;Parent=gene-AC57_RS09635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=49363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS09635;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000107.1 1 12731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000107.1 RefSeq region 1 12731 . + . ID=NZ_JJLR01000107.1:1..12731;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000107.1 RefSeq pseudogene 1 143 . + . ID=gene-AC57_RS0124740;Name=AC57_RS0124740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124740;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000107.1 Protein Homology CDS 1 143 . + 2 ID=cds-AC57_RS0124740;Parent=gene-AC57_RS0124740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0124740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 336 488 . - . ID=gene-AC57_RS09630;Name=AC57_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS09630;old_locus_tag=AC57_3013 NZ_JJLR01000107.1 Protein Homology CDS 336 488 . - 0 ID=cds-WP_000956460.1;Parent=gene-AC57_RS09630;Dbxref=GenBank:WP_000956460.1;Name=WP_000956460.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AC57_RS09630;product=Hok/Gef family protein;protein_id=WP_000956460.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 753 1487 . - . ID=gene-AC57_RS09625;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AC57_RS09625;old_locus_tag=AC57_3014 NZ_JJLR01000107.1 Protein Homology CDS 753 1487 . - 0 ID=cds-WP_000039851.1;Parent=gene-AC57_RS09625;Dbxref=GenBank:WP_000039851.1;Name=WP_000039851.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417242.1;locus_tag=AC57_RS09625;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039851.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 1562 3274 . - . ID=gene-AC57_RS09620;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AC57_RS09620;old_locus_tag=AC57_3015 NZ_JJLR01000107.1 Protein Homology CDS 1562 3274 . - 0 ID=cds-WP_001290699.1;Parent=gene-AC57_RS09620;Dbxref=GenBank:WP_001290699.1;Name=WP_001290699.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AC57_RS09620;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290699.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 3274 5073 . - . ID=gene-AC57_RS09615;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AC57_RS09615;old_locus_tag=AC57_3016 NZ_JJLR01000107.1 Protein Homology CDS 3274 5073 . - 0 ID=cds-WP_000211907.1;Parent=gene-AC57_RS09615;Dbxref=GenBank:WP_000211907.1;Name=WP_000211907.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=AC57_RS09615;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_000211907.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 5392 5754 . + . ID=gene-AC57_RS09610;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AC57_RS09610;old_locus_tag=AC57_3018 NZ_JJLR01000107.1 Protein Homology CDS 5392 5754 . + 0 ID=cds-WP_000108294.1;Parent=gene-AC57_RS09610;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AC57_RS09610;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 5832 7103 . + . ID=gene-AC57_RS09605;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AC57_RS09605;old_locus_tag=AC57_3019 NZ_JJLR01000107.1 Protein Homology CDS 5832 7103 . + 0 ID=cds-WP_032285722.1;Parent=gene-AC57_RS09605;Dbxref=GenBank:WP_032285722.1;Name=WP_032285722.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417246.4;locus_tag=AC57_RS09605;product=FAD-dependent oxidoreductase;protein_id=WP_032285722.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 7094 7354 . + . ID=gene-AC57_RS09600;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AC57_RS09600;old_locus_tag=AC57_3020 NZ_JJLR01000107.1 Protein Homology CDS 7094 7354 . + 0 ID=cds-WP_000109529.1;Parent=gene-AC57_RS09600;Dbxref=GenBank:WP_000109529.1;Name=WP_000109529.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AC57_RS09600;product=ferredoxin family protein;protein_id=WP_000109529.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 7371 7946 . + . ID=gene-AC57_RS09595;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AC57_RS09595;old_locus_tag=AC57_3021 NZ_JJLR01000107.1 Protein Homology CDS 7371 7946 . + 0 ID=cds-WP_001130266.1;Parent=gene-AC57_RS09595;Dbxref=GenBank:WP_001130266.1;Name=WP_001130266.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AC57_RS09595;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_001130266.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 8094 8954 . - . ID=gene-AC57_RS09590;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=AC57_RS09590;old_locus_tag=AC57_3022 NZ_JJLR01000107.1 Protein Homology CDS 8094 8954 . - 0 ID=cds-WP_032237865.1;Parent=gene-AC57_RS09590;Dbxref=GenBank:WP_032237865.1;Name=WP_032237865.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AC57_RS09590;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_032237865.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 8951 9730 . - . ID=gene-AC57_RS09585;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AC57_RS09585;old_locus_tag=AC57_3023 NZ_JJLR01000107.1 Protein Homology CDS 8951 9730 . - 0 ID=cds-WP_032237864.1;Parent=gene-AC57_RS09585;Dbxref=GenBank:WP_032237864.1;Name=WP_032237864.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708567.2;locus_tag=AC57_RS09585;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_032237864.1;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 9708 11117 . - . ID=gene-AC57_RS09580;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AC57_RS09580;old_locus_tag=AC57_3024 NZ_JJLR01000107.1 Protein Homology CDS 9708 11117 . - 0 ID=cds-WP_001618808.1;Parent=gene-AC57_RS09580;Dbxref=GenBank:WP_001618808.1;Name=WP_001618808.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AC57_RS09580;product=MFS transporter;protein_id=WP_001618808.1;transl_table=11 NZ_JJLR01000107.1 RefSeq pseudogene 11139 12489 . - . ID=gene-AC57_RS27530;Name=ygcU;end_range=12489,.;gbkey=Gene;gene=ygcU;gene_biotype=pseudogene;locus_tag=AC57_RS27530;partial=true;pseudo=true NZ_JJLR01000107.1 Protein Homology CDS 11139 12489 . - 0 ID=cds-AC57_RS27530;Parent=gene-AC57_RS27530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491,GO:0071949;end_range=12489,.;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026183.1;locus_tag=AC57_RS27530;partial=true;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11 NZ_JJLR01000107.1 RefSeq gene 12545 12731 . + . ID=gene-AC57_RS27535;Name=AC57_RS27535;end_range=12731,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27535;old_locus_tag=AC57_3026;partial=true NZ_JJLR01000107.1 Protein Homology CDS 12545 12731 . + 0 ID=cds-WP_001397581.1-3;Parent=gene-AC57_RS27535;Dbxref=GenBank:WP_001397581.1;Name=WP_001397581.1;Ontology_term=GO:0006313;end_range=12731,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27535;partial=true;product=IS1 family transposase;protein_id=WP_001397581.1;transl_table=11 ##sequence-region NZ_JJLR01000108.1 1 92940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000108.1 RefSeq region 1 92940 . + . ID=NZ_JJLR01000108.1:1..92940;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000108.1 RefSeq pseudogene 1 350 . + . ID=gene-AC57_RS09570;Name=AC57_RS09570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS09570;old_locus_tag=AC57_3027;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000108.1 Protein Homology CDS 1 350 . + 2 ID=cds-AC57_RS09570;Parent=gene-AC57_RS09570;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS09570;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000108.1 RefSeq pseudogene 366 473 . - . ID=gene-AC57_RS29915;Name=AC57_RS29915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29915;partial=true;pseudo=true;start_range=.,366 NZ_JJLR01000108.1 Protein Homology CDS 366 473 . - 0 ID=cds-AC57_RS29915;Parent=gene-AC57_RS29915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311656.1;locus_tag=AC57_RS29915;partial=true;product=FAD-binding protein;pseudo=true;start_range=.,366;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 543 1328 . - . ID=gene-AC57_RS09565;Name=ygcW;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=AC57_RS09565;old_locus_tag=AC57_3028 NZ_JJLR01000108.1 Protein Homology CDS 543 1328 . - 0 ID=cds-WP_000021321.1;Parent=gene-AC57_RS09565;Dbxref=GenBank:WP_000021321.1;Name=WP_000021321.1;gbkey=CDS;gene=ygcW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AC57_RS09565;product=SDR family oxidoreductase;protein_id=WP_000021321.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 1647 2924 . + . ID=gene-AC57_RS09560;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=AC57_RS09560;old_locus_tag=AC57_3029 NZ_JJLR01000108.1 Protein Homology CDS 1647 2924 . + 0 ID=cds-WP_032237863.1;Parent=gene-AC57_RS09560;Dbxref=GenBank:WP_032237863.1;Name=WP_032237863.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;gene=yqcE;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417255.1;locus_tag=AC57_RS09560;product=MFS transporter;protein_id=WP_032237863.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 2951 4429 . + . ID=gene-AC57_RS09555;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=AC57_RS09555;old_locus_tag=AC57_3030 NZ_JJLR01000108.1 Protein Homology CDS 2951 4429 . + 0 ID=cds-WP_000039730.1;Parent=gene-AC57_RS09555;Dbxref=GenBank:WP_000039730.1;Name=WP_000039730.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;gene=ygcE;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AC57_RS09555;product=FGGY-family carbohydrate kinase;protein_id=WP_000039730.1;transl_table=11 NZ_JJLR01000108.1 RefSeq direct_repeat 5068 5706 . + . ID=id-NZ_JJLR01000108.1:5068..5706;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=5068..5096;rpt_unit_seq=cggtttatccccgctggcgcggggaacac NZ_JJLR01000108.1 RefSeq gene 6046 6717 . - . ID=gene-AC57_RS09550;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AC57_RS09550;old_locus_tag=AC57_3033 NZ_JJLR01000108.1 Protein Homology CDS 6046 6717 . - 0 ID=cds-WP_001199973.1;Parent=gene-AC57_RS09550;Dbxref=GenBank:WP_001199973.1;Name=WP_001199973.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AC57_RS09550;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 6856 6996 . + . ID=gene-AC57_RS09545;Name=yqcG;gbkey=Gene;gene=yqcG;gene_biotype=protein_coding;locus_tag=AC57_RS09545;old_locus_tag=AC57_3034 NZ_JJLR01000108.1 Protein Homology CDS 6856 6996 . + 0 ID=cds-WP_001288228.1;Parent=gene-AC57_RS09545;Dbxref=GenBank:WP_001288228.1;Name=WP_001288228.1;gbkey=CDS;gene=yqcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791252.1;locus_tag=AC57_RS09545;product=cell envelope stress response protein YqcG;protein_id=WP_001288228.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 7010 7882 . + . ID=gene-AC57_RS09540;Name=ygcG;gbkey=Gene;gene=ygcG;gene_biotype=protein_coding;locus_tag=AC57_RS09540;old_locus_tag=AC57_3035 NZ_JJLR01000108.1 Protein Homology CDS 7010 7882 . + 0 ID=cds-WP_001268460.1;Parent=gene-AC57_RS09540;Dbxref=GenBank:WP_001268460.1;Name=WP_001268460.1;Ontology_term=GO:0016791;gbkey=CDS;gene=ygcG;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417258.4;locus_tag=AC57_RS09540;product=TPM domain-containing protein;protein_id=WP_001268460.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 7942 9240 . - . ID=gene-AC57_RS09535;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AC57_RS09535;old_locus_tag=AC57_3036 NZ_JJLR01000108.1 Protein Homology CDS 7942 9240 . - 0 ID=cds-WP_000036723.1;Parent=gene-AC57_RS09535;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AC57_RS09535;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 9328 10965 . - . ID=gene-AC57_RS09530;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AC57_RS09530;old_locus_tag=AC57_3037 NZ_JJLR01000108.1 Protein Homology CDS 9328 10965 . - 0 ID=cds-WP_000210878.1;Parent=gene-AC57_RS09530;Dbxref=GenBank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AC57_RS09530;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210878.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 11193 11984 . - . ID=gene-AC57_RS09525;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AC57_RS09525;old_locus_tag=AC57_3038 NZ_JJLR01000108.1 Protein Homology CDS 11193 11984 . - 0 ID=cds-WP_032237256.1;Parent=gene-AC57_RS09525;Dbxref=GenBank:WP_032237256.1;Name=WP_032237256.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AC57_RS09525;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_032237256.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 12055 12390 . - . ID=gene-AC57_RS09520;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AC57_RS09520;old_locus_tag=AC57_3039 NZ_JJLR01000108.1 Protein Homology CDS 12055 12390 . - 0 ID=cds-WP_000254738.1;Parent=gene-AC57_RS09520;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AC57_RS09520;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 12390 12638 . - . ID=gene-AC57_RS09515;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AC57_RS09515;old_locus_tag=AC57_3040 NZ_JJLR01000108.1 Protein Homology CDS 12390 12638 . - 0 ID=cds-WP_000581941.1;Parent=gene-AC57_RS09515;Dbxref=GenBank:WP_000581941.1;Name=WP_000581941.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AC57_RS09515;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581941.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 12716 14950 . - . ID=gene-AC57_RS09510;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AC57_RS09510;old_locus_tag=AC57_3041 NZ_JJLR01000108.1 Protein Homology CDS 12716 14950 . - 0 ID=cds-WP_000226815.1;Parent=gene-AC57_RS09510;Dbxref=GenBank:WP_000226815.1;Name=WP_000226815.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AC57_RS09510;product=GTP diphosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 14998 16299 . - . ID=gene-AC57_RS09505;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AC57_RS09505;old_locus_tag=AC57_3042 NZ_JJLR01000108.1 Protein Homology CDS 14998 16299 . - 0 ID=cds-WP_000046812.1;Parent=gene-AC57_RS09505;Dbxref=GenBank:WP_000046812.1;Name=WP_000046812.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AC57_RS09505;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046812.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 16356 19112 . + . ID=gene-AC57_RS09500;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AC57_RS09500;old_locus_tag=AC57_3043 NZ_JJLR01000108.1 Protein Homology CDS 16356 19112 . + 0 ID=cds-WP_000186450.1;Parent=gene-AC57_RS09500;Dbxref=GenBank:WP_000186450.1;Name=WP_000186450.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AC57_RS09500;product=two-component sensor histidine kinase BarA;protein_id=WP_000186450.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 19345 20685 . - . ID=gene-AC57_RS09495;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AC57_RS09495;old_locus_tag=AC57_3044 NZ_JJLR01000108.1 Protein Homology CDS 19345 20685 . - 0 ID=cds-WP_000098255.1;Parent=gene-AC57_RS09495;Dbxref=GenBank:WP_000098255.1;Name=WP_000098255.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AC57_RS09495;product=glucarate dehydratase;protein_id=WP_000098255.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 20706 22046 . - . ID=gene-AC57_RS09490;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=AC57_RS09490;old_locus_tag=AC57_3045 NZ_JJLR01000108.1 Protein Homology CDS 20706 22046 . - 0 ID=cds-WP_032084688.1;Parent=gene-AC57_RS09490;Dbxref=GenBank:WP_032084688.1;Name=WP_032084688.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417268.1;locus_tag=AC57_RS09490;product=enolase C-terminal domain-like protein;protein_id=WP_032084688.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 22048 23400 . - . ID=gene-AC57_RS09485;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AC57_RS09485;old_locus_tag=AC57_3046 NZ_JJLR01000108.1 Protein Homology CDS 22048 23400 . - 0 ID=cds-WP_032237257.1;Parent=gene-AC57_RS09485;Dbxref=GenBank:WP_032237257.1;Name=WP_032237257.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AC57_RS09485;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_032237257.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 23835 24284 . - . ID=gene-AC57_RS09480;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=AC57_RS09480;old_locus_tag=AC57_3049 NZ_JJLR01000108.1 Protein Homology CDS 23835 24284 . - 0 ID=cds-WP_000807753.1;Parent=gene-AC57_RS09480;Dbxref=GenBank:WP_000807753.1;Name=WP_000807753.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AC57_RS09480;product=flavodoxin;protein_id=WP_000807753.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 24302 25084 . - . ID=gene-AC57_RS09475;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AC57_RS09475;old_locus_tag=AC57_3050 NZ_JJLR01000108.1 Protein Homology CDS 24302 25084 . - 0 ID=cds-WP_000890001.1;Parent=gene-AC57_RS09475;Dbxref=GenBank:WP_000890001.1;Name=WP_000890001.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AC57_RS09475;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890001.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 25084 25413 . - . ID=gene-AC57_RS09470;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=AC57_RS09470;old_locus_tag=AC57_3051 NZ_JJLR01000108.1 Protein Homology CDS 25084 25413 . - 0 ID=cds-WP_000206990.1;Parent=gene-AC57_RS09470;Dbxref=GenBank:WP_000206990.1;Name=WP_000206990.1;gbkey=CDS;gene=yqcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417272.1;locus_tag=AC57_RS09470;product=YqcC family protein;protein_id=WP_000206990.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 26035 26580 . - . ID=gene-AC57_RS09465;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AC57_RS09465;old_locus_tag=AC57_3052 NZ_JJLR01000108.1 Protein Homology CDS 26035 26580 . - 0 ID=cds-WP_000342431.1;Parent=gene-AC57_RS09465;Dbxref=GenBank:WP_000342431.1;Name=WP_000342431.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AC57_RS09465;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 26648 27496 . + . ID=gene-AC57_RS09460;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AC57_RS09460;old_locus_tag=AC57_3053 NZ_JJLR01000108.1 Protein Homology CDS 26648 27496 . + 0 ID=cds-WP_000100420.1;Parent=gene-AC57_RS09460;Dbxref=GenBank:WP_000100420.1;Name=WP_000100420.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417274.1;locus_tag=AC57_RS09460;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_000100420.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 27608 28972 . + . ID=gene-AC57_RS09455;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AC57_RS09455;old_locus_tag=AC57_3054 NZ_JJLR01000108.1 Protein Homology CDS 27608 28972 . + 0 ID=cds-WP_000627995.1;Parent=gene-AC57_RS09455;Dbxref=GenBank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AC57_RS09455;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627995.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 29529 30818 . + . ID=gene-AC57_RS09450;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AC57_RS09450;old_locus_tag=AC57_3055 NZ_JJLR01000108.1 Protein Homology CDS 29529 30818 . + 0 ID=cds-WP_000450476.1;Parent=gene-AC57_RS09450;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AC57_RS09450;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 30876 32243 . + . ID=gene-AC57_RS09445;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AC57_RS09445;old_locus_tag=AC57_3056 NZ_JJLR01000108.1 Protein Homology CDS 30876 32243 . + 0 ID=cds-WP_000626368.1;Parent=gene-AC57_RS09445;Dbxref=GenBank:WP_000626368.1;Name=WP_000626368.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708592.1;locus_tag=AC57_RS09445;product=L-serine ammonia-lyase II;protein_id=WP_000626368.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 32355 33110 . + . ID=gene-AC57_RS09440;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AC57_RS09440;old_locus_tag=AC57_3057 NZ_JJLR01000108.1 Protein Homology CDS 32355 33110 . + 0 ID=cds-WP_000268232.1;Parent=gene-AC57_RS09440;Dbxref=GenBank:WP_000268232.1;Name=WP_000268232.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AC57_RS09440;product=flap endonuclease Xni;protein_id=WP_000268232.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 33165 34313 . - . ID=gene-AC57_RS09435;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AC57_RS09435;old_locus_tag=AC57_3058 NZ_JJLR01000108.1 Protein Homology CDS 33165 34313 . - 0 ID=cds-WP_000013591.1;Parent=gene-AC57_RS09435;Dbxref=GenBank:WP_000013591.1;Name=WP_000013591.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AC57_RS09435;product=lactaldehyde reductase;protein_id=WP_000013591.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 34341 34988 . - . ID=gene-AC57_RS09430;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AC57_RS09430;old_locus_tag=AC57_3059 NZ_JJLR01000108.1 Protein Homology CDS 34341 34988 . - 0 ID=cds-WP_000440781.1;Parent=gene-AC57_RS09430;Dbxref=GenBank:WP_000440781.1;Name=WP_000440781.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417280.1;locus_tag=AC57_RS09430;product=L-fuculose-phosphate aldolase;protein_id=WP_000440781.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 35535 36851 . + . ID=gene-AC57_RS09425;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AC57_RS09425;old_locus_tag=AC57_3060 NZ_JJLR01000108.1 Protein Homology CDS 35535 36851 . + 0 ID=cds-WP_000528603.1;Parent=gene-AC57_RS09425;Dbxref=GenBank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AC57_RS09425;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 36884 38659 . + . ID=gene-AC57_RS09420;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AC57_RS09420;old_locus_tag=AC57_3061 NZ_JJLR01000108.1 Protein Homology CDS 36884 38659 . + 0 ID=cds-WP_000724153.1;Parent=gene-AC57_RS09420;Dbxref=GenBank:WP_000724153.1;Name=WP_000724153.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AC57_RS09420;product=L-fucose isomerase;protein_id=WP_000724153.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 38768 40186 . + . ID=gene-AC57_RS09415;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AC57_RS09415;old_locus_tag=AC57_3062 NZ_JJLR01000108.1 Protein Homology CDS 38768 40186 . + 0 ID=cds-WP_000808397.1;Parent=gene-AC57_RS09415;Dbxref=GenBank:WP_000808397.1;Name=WP_000808397.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AC57_RS09415;product=L-fuculokinase;protein_id=WP_000808397.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 40188 40610 . + . ID=gene-AC57_RS09410;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AC57_RS09410;old_locus_tag=AC57_3063 NZ_JJLR01000108.1 Protein Homology CDS 40188 40610 . + 0 ID=cds-WP_000920840.1;Parent=gene-AC57_RS09410;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AC57_RS09410;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 40668 41399 . + . ID=gene-AC57_RS09405;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AC57_RS09405;old_locus_tag=AC57_3064 NZ_JJLR01000108.1 Protein Homology CDS 40668 41399 . + 0 ID=cds-WP_000642344.1;Parent=gene-AC57_RS09405;Dbxref=GenBank:WP_000642344.1;Name=WP_000642344.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417285.1;locus_tag=AC57_RS09405;product=L-fucose operon activator;protein_id=WP_000642344.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 41443 42543 . - . ID=gene-AC57_RS09400;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AC57_RS09400;old_locus_tag=AC57_3065 NZ_JJLR01000108.1 Protein Homology CDS 41443 42543 . - 0 ID=cds-WP_001045520.1;Parent=gene-AC57_RS09400;Dbxref=GenBank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AC57_RS09400;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 42536 42931 . - . ID=gene-AC57_RS09395;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AC57_RS09395;old_locus_tag=AC57_3066 NZ_JJLR01000108.1 Protein Homology CDS 42536 42931 . - 0 ID=cds-WP_000203905.1;Parent=gene-AC57_RS09395;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AC57_RS09395;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 42950 43867 . - . ID=gene-AC57_RS09390;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AC57_RS09390;old_locus_tag=AC57_3067 NZ_JJLR01000108.1 Protein Homology CDS 42950 43867 . - 0 ID=cds-WP_032197150.1;Parent=gene-AC57_RS09390;Dbxref=GenBank:WP_032197150.1;Name=WP_032197150.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AC57_RS09390;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_032197150.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 44218 44445 . - . ID=gene-AC57_RS09385;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AC57_RS09385;old_locus_tag=AC57_3068 NZ_JJLR01000108.1 Protein Homology CDS 44218 44445 . - 0 ID=cds-WP_000750398.1;Parent=gene-AC57_RS09385;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AC57_RS09385;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 44637 45842 . + . ID=gene-AC57_RS09380;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AC57_RS09380;old_locus_tag=AC57_3069 NZ_JJLR01000108.1 Protein Homology CDS 44637 45842 . + 0 ID=cds-WP_001300698.1;Parent=gene-AC57_RS09380;Dbxref=GenBank:WP_001300698.1;Name=WP_001300698.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AC57_RS09380;product=cysteine desulfurase CsdA;protein_id=WP_001300698.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 45842 46285 . + . ID=gene-AC57_RS09375;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AC57_RS09375;old_locus_tag=AC57_3070 NZ_JJLR01000108.1 Protein Homology CDS 45842 46285 . + 0 ID=cds-WP_000184261.1;Parent=gene-AC57_RS09375;Dbxref=GenBank:WP_000184261.1;Name=WP_000184261.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AC57_RS09375;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184261.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 46336 47142 . - . ID=gene-AC57_RS09370;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AC57_RS09370;old_locus_tag=AC57_3071 NZ_JJLR01000108.1 Protein Homology CDS 46336 47142 . - 0 ID=cds-WP_001425990.1;Parent=gene-AC57_RS09370;Dbxref=GenBank:WP_001425990.1;Name=WP_001425990.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417292.1;locus_tag=AC57_RS09370;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_001425990.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 47381 48478 . - . ID=gene-AC57_RS09365;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AC57_RS09365;old_locus_tag=AC57_3072 NZ_JJLR01000108.1 Protein Homology CDS 47381 48478 . - 0 ID=cds-WP_000678646.1;Parent=gene-AC57_RS09365;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AC57_RS09365;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 48687 48763 . + . ID=gene-AC57_RS09360;Name=AC57_RS09360;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09360;old_locus_tag=AC57_3073 NZ_JJLR01000108.1 tRNAscan-SE tRNA 48687 48763 . + . ID=rna-AC57_RS09360;Parent=gene-AC57_RS09360;anticodon=(pos:48721..48723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09360;product=tRNA-Met NZ_JJLR01000108.1 tRNAscan-SE exon 48687 48763 . + . ID=exon-AC57_RS09360-1;Parent=rna-AC57_RS09360;anticodon=(pos:48721..48723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09360;product=tRNA-Met NZ_JJLR01000108.1 RefSeq gene 48797 48873 . + . ID=gene-AC57_RS09355;Name=AC57_RS09355;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09355;old_locus_tag=AC57_3074 NZ_JJLR01000108.1 tRNAscan-SE tRNA 48797 48873 . + . ID=rna-AC57_RS09355;Parent=gene-AC57_RS09355;anticodon=(pos:48831..48833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09355;product=tRNA-Met NZ_JJLR01000108.1 tRNAscan-SE exon 48797 48873 . + . ID=exon-AC57_RS09355-1;Parent=rna-AC57_RS09355;anticodon=(pos:48831..48833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09355;product=tRNA-Met NZ_JJLR01000108.1 RefSeq gene 48907 48983 . + . ID=gene-AC57_RS09350;Name=AC57_RS09350;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09350;old_locus_tag=AC57_3075 NZ_JJLR01000108.1 tRNAscan-SE tRNA 48907 48983 . + . ID=rna-AC57_RS09350;Parent=gene-AC57_RS09350;anticodon=(pos:48941..48943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09350;product=tRNA-Met NZ_JJLR01000108.1 tRNAscan-SE exon 48907 48983 . + . ID=exon-AC57_RS09350-1;Parent=rna-AC57_RS09350;anticodon=(pos:48941..48943);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09350;product=tRNA-Met NZ_JJLR01000108.1 RefSeq gene 49057 50310 . - . ID=gene-AC57_RS09345;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AC57_RS09345;old_locus_tag=AC57_3076 NZ_JJLR01000108.1 Protein Homology CDS 49057 50310 . - 0 ID=cds-WP_000016907.1;Parent=gene-AC57_RS09345;Dbxref=GenBank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AC57_RS09345;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 50542 51873 . + . ID=gene-AC57_RS09340;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AC57_RS09340;old_locus_tag=AC57_3077 NZ_JJLR01000108.1 Protein Homology CDS 50542 51873 . + 0 ID=cds-WP_000237947.1;Parent=gene-AC57_RS09340;Dbxref=GenBank:WP_000237947.1;Name=WP_000237947.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AC57_RS09340;product=amino-acid N-acetyltransferase;protein_id=WP_000237947.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 51935 53761 . - . ID=gene-AC57_RS09335;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AC57_RS09335;old_locus_tag=AC57_3078 NZ_JJLR01000108.1 Protein Homology CDS 51935 53761 . - 0 ID=cds-WP_000775931.1;Parent=gene-AC57_RS09335;Dbxref=GenBank:WP_000775931.1;Name=WP_000775931.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AC57_RS09335;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_000775931.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 53761 57303 . - . ID=gene-AC57_RS09330;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AC57_RS09330;old_locus_tag=AC57_3079 NZ_JJLR01000108.1 Protein Homology CDS 53761 57303 . - 0 ID=cds-WP_001460029.1;Parent=gene-AC57_RS09330;Dbxref=GenBank:WP_001460029.1;Name=WP_001460029.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=AC57_RS09330;product=exodeoxyribonuclease V subunit beta;protein_id=WP_001460029.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 57296 60184 . - . ID=gene-AC57_RS09325;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AC57_RS09325;old_locus_tag=AC57_3080 NZ_JJLR01000108.1 Protein Homology CDS 57296 60184 . - 0 ID=cds-WP_001138156.1;Parent=gene-AC57_RS09325;Dbxref=GenBank:WP_001138156.1;Name=WP_001138156.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=AC57_RS09325;product=pitrilysin;protein_id=WP_001138156.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 60360 63728 . - . ID=gene-AC57_RS09320;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AC57_RS09320;old_locus_tag=AC57_3081 NZ_JJLR01000108.1 Protein Homology CDS 60360 63728 . - 0 ID=cds-WP_000946887.1;Parent=gene-AC57_RS09320;Dbxref=GenBank:WP_000946887.1;Name=WP_000946887.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AC57_RS09320;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_000946887.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 63741 64064 . - . ID=gene-AC57_RS09315;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AC57_RS09315;old_locus_tag=AC57_3082 NZ_JJLR01000108.1 Protein Homology CDS 63741 64064 . - 0 ID=cds-WP_001276478.1;Parent=gene-AC57_RS09315;Dbxref=GenBank:WP_001276478.1;Name=WP_001276478.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AC57_RS09315;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_001276478.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 64049 64456 . - . ID=gene-AC57_RS09310;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=AC57_RS09310;old_locus_tag=AC57_3083 NZ_JJLR01000108.1 Protein Homology CDS 64049 64456 . - 0 ID=cds-WP_032237260.1;Parent=gene-AC57_RS09310;Dbxref=GenBank:WP_032237260.1;Name=WP_032237260.1;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AC57_RS09310;product=DUF2509 family protein;protein_id=WP_032237260.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 64453 65016 . - . ID=gene-AC57_RS09305;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AC57_RS09305;old_locus_tag=AC57_3084 NZ_JJLR01000108.1 Protein Homology CDS 64453 65016 . - 0 ID=cds-WP_001144297.1;Parent=gene-AC57_RS09305;Dbxref=GenBank:WP_001144297.1;Name=WP_001144297.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439276.1;locus_tag=AC57_RS09305;product=prepilin peptidase-dependent protein;protein_id=WP_001144297.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 65007 65477 . - . ID=gene-AC57_RS09300;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AC57_RS09300;old_locus_tag=AC57_3085 NZ_JJLR01000108.1 Protein Homology CDS 65007 65477 . - 0 ID=cds-WP_000857051.1;Parent=gene-AC57_RS09300;Dbxref=GenBank:WP_000857051.1;Name=WP_000857051.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AC57_RS09300;product=prepilin peptidase-dependent protein;protein_id=WP_000857051.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 65662 66456 . - . ID=gene-AC57_RS09295;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AC57_RS09295;old_locus_tag=AC57_3086 NZ_JJLR01000108.1 Protein Homology CDS 65662 66456 . - 0 ID=cds-WP_032237262.1;Parent=gene-AC57_RS09295;Dbxref=GenBank:WP_032237262.1;Name=WP_032237262.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AC57_RS09295;product=thymidylate synthase;protein_id=WP_032237262.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 66463 67338 . - . ID=gene-AC57_RS09290;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AC57_RS09290;old_locus_tag=AC57_3087 NZ_JJLR01000108.1 Protein Homology CDS 66463 67338 . - 0 ID=cds-WP_000204658.1;Parent=gene-AC57_RS09290;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AC57_RS09290;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 67489 69735 . - . ID=gene-AC57_RS09285;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC57_RS09285;old_locus_tag=AC57_3088 NZ_JJLR01000108.1 Protein Homology CDS 67489 69735 . - 0 ID=cds-WP_000957914.1;Parent=gene-AC57_RS09285;Dbxref=GenBank:WP_000957914.1;Name=WP_000957914.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=AC57_RS09285;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_000957914.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 69748 70278 . - . ID=gene-AC57_RS09280;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AC57_RS09280;old_locus_tag=AC57_3089 NZ_JJLR01000108.1 Protein Homology CDS 69748 70278 . - 0 ID=cds-WP_000564489.1;Parent=gene-AC57_RS09280;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AC57_RS09280;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 70631 70777 . - . ID=gene-AC57_RS31035;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AC57_RS31035 NZ_JJLR01000108.1 Protein Homology CDS 70631 70777 . - 0 ID=cds-WP_000953278.1;Parent=gene-AC57_RS31035;Dbxref=GenBank:WP_000953278.1;Name=WP_000953278.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AC57_RS31035;product=protein YgdT;protein_id=WP_000953278.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 70963 71652 . + . ID=gene-AC57_RS09270;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AC57_RS09270;old_locus_tag=AC57_3091 NZ_JJLR01000108.1 Protein Homology CDS 70963 71652 . + 0 ID=cds-WP_000082188.1;Parent=gene-AC57_RS09270;Dbxref=GenBank:WP_000082188.1;Name=WP_000082188.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311715.1;locus_tag=AC57_RS09270;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082188.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 71721 72434 . + . ID=gene-AC57_RS09265;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AC57_RS09265;old_locus_tag=AC57_3092 NZ_JJLR01000108.1 Protein Homology CDS 71721 72434 . + 0 ID=cds-WP_032237263.1;Parent=gene-AC57_RS09265;Dbxref=GenBank:WP_032237263.1;Name=WP_032237263.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AC57_RS09265;product=TerC family protein;protein_id=WP_032237263.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 72572 72790 . + . ID=gene-AC57_RS09260;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AC57_RS09260;old_locus_tag=AC57_3093 NZ_JJLR01000108.1 Protein Homology CDS 72572 72790 . + 0 ID=cds-WP_000758655.1;Parent=gene-AC57_RS09260;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AC57_RS09260;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 72898 73938 . + . ID=gene-AC57_RS09255;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AC57_RS09255;old_locus_tag=AC57_3094 NZ_JJLR01000108.1 Protein Homology CDS 72898 73938 . + 0 ID=cds-WP_032279781.1;Parent=gene-AC57_RS09255;Dbxref=GenBank:WP_032279781.1;Name=WP_032279781.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311718.1;locus_tag=AC57_RS09255;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_032279781.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 73970 75163 . - . ID=gene-AC57_RS09250;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AC57_RS09250;old_locus_tag=AC57_3095 NZ_JJLR01000108.1 Protein Homology CDS 73970 75163 . - 0 ID=cds-WP_000004616.1;Parent=gene-AC57_RS09250;Dbxref=GenBank:WP_000004616.1;Name=WP_000004616.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417312.1;locus_tag=AC57_RS09250;product=lysophospholipid transporter LplT;protein_id=WP_000004616.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 75156 77315 . - . ID=gene-AC57_RS09245;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AC57_RS09245;old_locus_tag=AC57_3096 NZ_JJLR01000108.1 Protein Homology CDS 75156 77315 . - 0 ID=cds-WP_000899054.1;Parent=gene-AC57_RS09245;Dbxref=GenBank:WP_000899054.1;Name=WP_000899054.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417313.1;locus_tag=AC57_RS09245;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_000899054.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 77900 78931 . + . ID=gene-AC57_RS09240;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AC57_RS09240;old_locus_tag=AC57_3097 NZ_JJLR01000108.1 Protein Homology CDS 77900 78931 . + 0 ID=cds-WP_001469230.1;Parent=gene-AC57_RS09240;Dbxref=GenBank:WP_001469230.1;Name=WP_001469230.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AC57_RS09240;product=HTH-type transcriptional regulator GalR;protein_id=WP_001469230.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 78938 80200 . - . ID=gene-AC57_RS09235;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AC57_RS09235;old_locus_tag=AC57_3098 NZ_JJLR01000108.1 Protein Homology CDS 78938 80200 . - 0 ID=cds-WP_001120711.1;Parent=gene-AC57_RS09235;Dbxref=GenBank:WP_001120711.1;Name=WP_001120711.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AC57_RS09235;product=diaminopimelate decarboxylase;protein_id=WP_001120711.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 80322 81257 . + . ID=gene-AC57_RS09230;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AC57_RS09230;old_locus_tag=AC57_3099 NZ_JJLR01000108.1 Protein Homology CDS 80322 81257 . + 0 ID=cds-WP_000741828.1;Parent=gene-AC57_RS09230;Dbxref=GenBank:WP_000741828.1;Name=WP_000741828.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417316.1;locus_tag=AC57_RS09230;product=DNA-binding transcriptional regulator LysR;protein_id=WP_000741828.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 81244 81936 . - . ID=gene-AC57_RS09225;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AC57_RS09225;old_locus_tag=AC57_3100 NZ_JJLR01000108.1 Protein Homology CDS 81244 81936 . - 0 ID=cds-WP_000848664.1;Parent=gene-AC57_RS09225;Dbxref=GenBank:WP_000848664.1;Name=WP_000848664.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AC57_RS09225;product=amino acid racemase;protein_id=WP_000848664.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 82065 83483 . - . ID=gene-AC57_RS09220;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AC57_RS09220;old_locus_tag=AC57_3101 NZ_JJLR01000108.1 Protein Homology CDS 82065 83483 . - 0 ID=cds-WP_000256437.1;Parent=gene-AC57_RS09220;Dbxref=GenBank:WP_000256437.1;Name=WP_000256437.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AC57_RS09220;product=arabinose-proton symporter AraE;protein_id=WP_000256437.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 83798 84559 . - . ID=gene-AC57_RS09215;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AC57_RS09215;old_locus_tag=AC57_3102 NZ_JJLR01000108.1 Protein Homology CDS 83798 84559 . - 0 ID=cds-WP_000603508.1;Parent=gene-AC57_RS09215;Dbxref=GenBank:WP_000603508.1;Name=WP_000603508.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417319.1;locus_tag=AC57_RS09215;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603508.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 84589 85425 . - . ID=gene-AC57_RS09210;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AC57_RS09210;old_locus_tag=AC57_3103 NZ_JJLR01000108.1 Protein Homology CDS 84589 85425 . - 0 ID=cds-WP_000383224.1;Parent=gene-AC57_RS09210;Dbxref=GenBank:WP_000383224.1;Name=WP_000383224.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AC57_RS09210;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383224.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 85712 86893 . - . ID=gene-AC57_RS09205;Name=yqeF;gbkey=Gene;gene=yqeF;gene_biotype=protein_coding;locus_tag=AC57_RS09205;old_locus_tag=AC57_3104 NZ_JJLR01000108.1 Protein Homology CDS 85712 86893 . - 0 ID=cds-WP_000656022.1;Parent=gene-AC57_RS09205;Dbxref=GenBank:WP_000656022.1;Name=WP_000656022.1;Ontology_term=GO:0003985;gbkey=CDS;gene=yqeF;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708633.2;locus_tag=AC57_RS09205;product=acetyl-CoA C-acetyltransferase;protein_id=WP_000656022.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 87148 88377 . + . ID=gene-AC57_RS09200;Name=yqeG;gbkey=Gene;gene=yqeG;gene_biotype=protein_coding;locus_tag=AC57_RS09200;old_locus_tag=AC57_3105 NZ_JJLR01000108.1 Protein Homology CDS 87148 88377 . + 0 ID=cds-WP_000065961.1;Parent=gene-AC57_RS09200;Dbxref=GenBank:WP_000065961.1;Name=WP_000065961.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=yqeG;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AC57_RS09200;product=amino acid permease;protein_id=WP_000065961.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 88837 89469 . + . ID=gene-AC57_RS09195;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=AC57_RS09195;old_locus_tag=AC57_3106 NZ_JJLR01000108.1 Protein Homology CDS 88837 89469 . + 0 ID=cds-WP_001305805.1;Parent=gene-AC57_RS09195;Dbxref=GenBank:WP_001305805.1;Name=WP_001305805.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yqeH;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417323.2;locus_tag=AC57_RS09195;product=helix-turn-helix transcriptional regulator;protein_id=WP_001305805.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 89803 90612 . + . ID=gene-AC57_RS09190;Name=yqeI;gbkey=Gene;gene=yqeI;gene_biotype=protein_coding;locus_tag=AC57_RS09190;old_locus_tag=AC57_3108 NZ_JJLR01000108.1 Protein Homology CDS 89803 90612 . + 0 ID=cds-WP_001295154.1;Parent=gene-AC57_RS09190;Dbxref=GenBank:WP_001295154.1;Name=WP_001295154.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yqeI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417324.1;locus_tag=AC57_RS09190;product=winged helix-turn-helix domain-containing protein;protein_id=WP_001295154.1;transl_table=11 NZ_JJLR01000108.1 RefSeq pseudogene 90605 91088 . + . ID=gene-AC57_RS0124755;Name=yqeJ;gbkey=Gene;gene=yqeJ;gene_biotype=pseudogene;locus_tag=AC57_RS0124755;pseudo=true NZ_JJLR01000108.1 Protein Homology CDS 90605 91088 . + 0 ID=cds-AC57_RS0124755;Parent=gene-AC57_RS0124755;Note=frameshifted;gbkey=CDS;gene=yqeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417325.4;locus_tag=AC57_RS0124755;product=protein YqeJ;pseudo=true;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 91121 91201 . - . ID=gene-AC57_RS29210;Name=AC57_RS29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29210 NZ_JJLR01000108.1 Protein Homology CDS 91121 91201 . - 0 ID=cds-WP_000655820.1;Parent=gene-AC57_RS29210;Dbxref=GenBank:WP_000655820.1;Name=WP_000655820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791253.1;locus_tag=AC57_RS29210;product=hypothetical protein;protein_id=WP_000655820.1;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 91237 91662 . - . ID=gene-AC57_RS0124760;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=AC57_RS0124760 NZ_JJLR01000108.1 Protein Homology CDS 91237 91662 . - 0 ID=cds-WP_000350612.1;Parent=gene-AC57_RS0124760;Dbxref=GenBank:WP_000350612.1;Name=WP_000350612.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417326.2;locus_tag=AC57_RS0124760;product=protein YqeK;protein_id=WP_000350612.1;transl_table=11 NZ_JJLR01000108.1 RefSeq pseudogene 91856 92345 . + . ID=gene-AC57_RS0124765;Name=AC57_RS0124765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124765;pseudo=true NZ_JJLR01000108.1 Protein Homology CDS 91856 92345 . + 0 ID=cds-AC57_RS0124765;Parent=gene-AC57_RS0124765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311734.1;locus_tag=AC57_RS0124765;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000108.1 RefSeq pseudogene 92570 92758 . + . ID=gene-AC57_RS0124770;Name=AC57_RS0124770;end_range=92758,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124770;partial=true;pseudo=true NZ_JJLR01000108.1 Protein Homology CDS 92570 92758 . + 0 ID=cds-AC57_RS0124770;Parent=gene-AC57_RS0124770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=92758,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417328.1;locus_tag=AC57_RS0124770;partial=true;product=CesD/SycD/LcrH family type III secretion system chaperone;pseudo=true;transl_table=11 NZ_JJLR01000108.1 RefSeq gene 92744 92940 . - . ID=gene-AC57_RS27560;Name=AC57_RS27560;end_range=92940,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27560;old_locus_tag=AC57_3111;partial=true NZ_JJLR01000108.1 Protein Homology CDS 92744 92940 . - 2 ID=cds-WP_000298061.1;Parent=gene-AC57_RS27560;Dbxref=GenBank:WP_000298061.1;Name=WP_000298061.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=92940,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27560;partial=true;product=IS1 family transposase;protein_id=WP_000298061.1;transl_table=11 ##sequence-region NZ_JJLR01000109.1 1 64975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000109.1 RefSeq region 1 64975 . + . ID=NZ_JJLR01000109.1:1..64975;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000109.1 RefSeq gene 28 378 . + . ID=gene-AC57_RS09185;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS09185;old_locus_tag=AC57_3112 NZ_JJLR01000109.1 Protein Homology CDS 28 378 . + 0 ID=cds-WP_000624688.1;Parent=gene-AC57_RS09185;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS09185;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 409 2022 . + . ID=gene-AC57_RS09180;Name=AC57_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS09180;old_locus_tag=AC57_3113 NZ_JJLR01000109.1 Protein Homology CDS 409 2022 . + 0 ID=cds-WP_000080172.1;Parent=gene-AC57_RS09180;Dbxref=GenBank:WP_000080172.1;Name=WP_000080172.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS09180;product=IS66-like element ISEc43 family transposase;protein_id=WP_000080172.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 2198 2755 . - . ID=gene-AC57_RS0124775;Name=AC57_RS0124775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124775 NZ_JJLR01000109.1 GeneMarkS-2+ CDS 2198 2755 . - 0 ID=cds-WP_050440083.1;Parent=gene-AC57_RS0124775;Dbxref=GenBank:WP_050440083.1;Name=WP_050440083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0124775;product=hypothetical protein;protein_id=WP_050440083.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 2916 4496 . - . ID=gene-AC57_RS09175;Name=AC57_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS09175;old_locus_tag=AC57_3114 NZ_JJLR01000109.1 Protein Homology CDS 2916 4496 . - 0 ID=cds-WP_032279639.1;Parent=gene-AC57_RS09175;Dbxref=GenBank:WP_032279639.1;Name=WP_032279639.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935132.1;locus_tag=AC57_RS09175;product=site-specific integrase;protein_id=WP_032279639.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 4619 4692 . - . ID=gene-AC57_RS09170;Name=AC57_RS09170;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS09170;old_locus_tag=AC57_3115 NZ_JJLR01000109.1 tRNAscan-SE tRNA 4619 4692 . - . ID=rna-AC57_RS09170;Parent=gene-AC57_RS09170;anticodon=(pos:complement(4658..4660));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09170;product=tRNA-Gly NZ_JJLR01000109.1 tRNAscan-SE exon 4619 4692 . - . ID=exon-AC57_RS09170-1;Parent=rna-AC57_RS09170;anticodon=(pos:complement(4658..4660));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS09170;product=tRNA-Gly NZ_JJLR01000109.1 RefSeq gene 4771 5526 . - . ID=gene-AC57_RS09165;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AC57_RS09165;old_locus_tag=AC57_3116 NZ_JJLR01000109.1 Protein Homology CDS 4771 5526 . - 0 ID=cds-WP_001272558.1;Parent=gene-AC57_RS09165;Dbxref=GenBank:WP_001272558.1;Name=WP_001272558.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311765.2;locus_tag=AC57_RS09165;product=amidase activator ActS;protein_id=WP_001272558.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 5941 8238 . + . ID=gene-AC57_RS09160;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AC57_RS09160;old_locus_tag=AC57_3117 NZ_JJLR01000109.1 Protein Homology CDS 5941 8238 . + 0 ID=cds-WP_001691822.1;Parent=gene-AC57_RS09160;Dbxref=GenBank:WP_001691822.1;Name=WP_001691822.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AC57_RS09160;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_001691822.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 8249 9127 . + . ID=gene-AC57_RS09155;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AC57_RS09155;old_locus_tag=AC57_3118 NZ_JJLR01000109.1 Protein Homology CDS 8249 9127 . + 0 ID=cds-WP_000459182.1;Parent=gene-AC57_RS09155;Dbxref=GenBank:WP_000459182.1;Name=WP_000459182.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417343.1;locus_tag=AC57_RS09155;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459182.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 9124 9603 . + . ID=gene-AC57_RS09150;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AC57_RS09150;old_locus_tag=AC57_3119 NZ_JJLR01000109.1 Protein Homology CDS 9124 9603 . + 0 ID=cds-WP_032246320.1;Parent=gene-AC57_RS09150;Dbxref=GenBank:WP_032246320.1;Name=WP_032246320.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AC57_RS09150;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_032246320.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 9643 11421 . - . ID=gene-AC57_RS09145;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=AC57_RS09145;old_locus_tag=AC57_3120 NZ_JJLR01000109.1 Protein Homology CDS 9643 11421 . - 0 ID=cds-WP_000417791.1;Parent=gene-AC57_RS09145;Dbxref=GenBank:WP_000417791.1;Name=WP_000417791.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=ygeV;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417345.1;locus_tag=AC57_RS09145;product=sigma-54 interaction domain-containing protein;protein_id=WP_000417791.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 11900 13087 . + . ID=gene-AC57_RS09140;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AC57_RS09140;old_locus_tag=AC57_3121 NZ_JJLR01000109.1 Protein Homology CDS 11900 13087 . + 0 ID=cds-WP_000859787.1;Parent=gene-AC57_RS09140;Dbxref=GenBank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AC57_RS09140;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 13145 14341 . + . ID=gene-AC57_RS09135;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AC57_RS09135;old_locus_tag=AC57_3122 NZ_JJLR01000109.1 Protein Homology CDS 13145 14341 . + 0 ID=cds-WP_000110500.1;Parent=gene-AC57_RS09135;Dbxref=GenBank:WP_000110500.1;Name=WP_000110500.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AC57_RS09135;product=diaminopropionate ammonia-lyase;protein_id=WP_000110500.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 14399 15610 . + . ID=gene-AC57_RS09130;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=AC57_RS09130;old_locus_tag=AC57_3123 NZ_JJLR01000109.1 Protein Homology CDS 14399 15610 . + 0 ID=cds-WP_001107125.1;Parent=gene-AC57_RS09130;Dbxref=GenBank:WP_001107125.1;Name=WP_001107125.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AC57_RS09130;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_001107125.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 15663 17048 . + . ID=gene-AC57_RS09125;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=AC57_RS09125;old_locus_tag=AC57_3124 NZ_JJLR01000109.1 Protein Homology CDS 15663 17048 . + 0 ID=cds-WP_001264452.1;Parent=gene-AC57_RS09125;Dbxref=GenBank:WP_001264452.1;Name=WP_001264452.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AC57_RS09125;product=D-phenylhydantoinase;protein_id=WP_001264452.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 17096 18028 . + . ID=gene-AC57_RS09120;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AC57_RS09120;old_locus_tag=AC57_3125 NZ_JJLR01000109.1 Protein Homology CDS 17096 18028 . + 0 ID=cds-WP_000037992.1;Parent=gene-AC57_RS09120;Dbxref=GenBank:WP_000037992.1;Name=WP_000037992.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417350.1;locus_tag=AC57_RS09120;product=carbamate kinase;protein_id=WP_000037992.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 18069 19694 . - . ID=gene-AC57_RS09115;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=AC57_RS09115;old_locus_tag=AC57_3126 NZ_JJLR01000109.1 Protein Homology CDS 18069 19694 . - 0 ID=cds-WP_001020381.1;Parent=gene-AC57_RS09115;Dbxref=GenBank:WP_001020381.1;Name=WP_001020381.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AC57_RS09115;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_001020381.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 19742 20512 . - . ID=gene-AC57_RS0124780;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=AC57_RS0124780 NZ_JJLR01000109.1 Protein Homology CDS 19742 20512 . - 0 ID=cds-WP_001300448.1;Parent=gene-AC57_RS0124780;Dbxref=GenBank:WP_001300448.1;Name=WP_001300448.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417352.2;locus_tag=AC57_RS0124780;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_001300448.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 20615 21193 . + . ID=gene-AC57_RS09110;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AC57_RS09110;old_locus_tag=AC57_3128 NZ_JJLR01000109.1 Protein Homology CDS 20615 21193 . + 0 ID=cds-WP_001272850.1;Parent=gene-AC57_RS09110;Dbxref=GenBank:WP_001272850.1;Name=WP_001272850.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417353.1;locus_tag=AC57_RS09110;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272850.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 21515 24613 . + . ID=gene-AC57_RS09105;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AC57_RS09105;old_locus_tag=AC57_3129 NZ_JJLR01000109.1 Protein Homology CDS 21515 24613 . + 0 ID=cds-WP_032237583.1;Parent=gene-AC57_RS09105;Dbxref=GenBank:WP_032237583.1;Name=WP_032237583.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417354.1;locus_tag=AC57_RS09105;product=putative selenate reductase subunit YgfK;protein_id=WP_032237583.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 24616 25944 . + . ID=gene-AC57_RS09100;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AC57_RS09100;old_locus_tag=AC57_3130 NZ_JJLR01000109.1 Protein Homology CDS 24616 25944 . + 0 ID=cds-WP_000906252.1;Parent=gene-AC57_RS09100;Dbxref=GenBank:WP_000906252.1;Name=WP_000906252.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417355.4;locus_tag=AC57_RS09100;product=putative aminohydrolase SsnA;protein_id=WP_000906252.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 25995 26774 . + . ID=gene-AC57_RS09095;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=AC57_RS09095;old_locus_tag=AC57_3131 NZ_JJLR01000109.1 Protein Homology CDS 25995 26774 . + 0 ID=cds-WP_000572462.1;Parent=gene-AC57_RS09095;Dbxref=GenBank:WP_000572462.1;Name=WP_000572462.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AC57_RS09095;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_000572462.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 26771 29641 . + . ID=gene-AC57_RS09090;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=AC57_RS09090;old_locus_tag=AC57_3132 NZ_JJLR01000109.1 Protein Homology CDS 26771 29641 . + 0 ID=cds-WP_000583615.1;Parent=gene-AC57_RS09090;Dbxref=GenBank:WP_000583615.1;Name=WP_000583615.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AC57_RS09090;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_000583615.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 29806 31206 . + . ID=gene-AC57_RS09085;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AC57_RS09085;old_locus_tag=AC57_3133 NZ_JJLR01000109.1 Protein Homology CDS 29806 31206 . + 0 ID=cds-WP_001280192.1;Parent=gene-AC57_RS09085;Dbxref=GenBank:WP_001280192.1;Name=WP_001280192.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AC57_RS09085;product=xanthine/proton symporter XanQ;protein_id=WP_001280192.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 31224 32540 . + . ID=gene-AC57_RS09080;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=AC57_RS09080;old_locus_tag=AC57_3134 NZ_JJLR01000109.1 Protein Homology CDS 31224 32540 . + 0 ID=cds-WP_001299798.1;Parent=gene-AC57_RS09080;Dbxref=GenBank:WP_001299798.1;Name=WP_001299798.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AC57_RS09080;product=guanine deaminase;protein_id=WP_001299798.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 32576 33943 . + . ID=gene-AC57_RS09075;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=AC57_RS09075;old_locus_tag=AC57_3135 NZ_JJLR01000109.1 Protein Homology CDS 32576 33943 . + 0 ID=cds-WP_032279641.1;Parent=gene-AC57_RS09075;Dbxref=GenBank:WP_032279641.1;Name=WP_032279641.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AC57_RS09075;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_032279641.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 33979 34467 . - . ID=gene-AC57_RS09070;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=AC57_RS09070;old_locus_tag=AC57_3136 NZ_JJLR01000109.1 Protein Homology CDS 33979 34467 . - 0 ID=cds-WP_000838422.1;Parent=gene-AC57_RS09070;Dbxref=GenBank:WP_000838422.1;Name=WP_000838422.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;gene=ygfS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AC57_RS09070;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838422.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 34467 36386 . - . ID=gene-AC57_RS09065;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AC57_RS09065;old_locus_tag=AC57_3137 NZ_JJLR01000109.1 Protein Homology CDS 34467 36386 . - 0 ID=cds-WP_032285724.1;Parent=gene-AC57_RS09065;Dbxref=GenBank:WP_032285724.1;Name=WP_032285724.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417363.2;locus_tag=AC57_RS09065;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_032285724.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 36822 38270 . + . ID=gene-AC57_RS09060;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AC57_RS09060;old_locus_tag=AC57_3138 NZ_JJLR01000109.1 Protein Homology CDS 36822 38270 . + 0 ID=cds-WP_001295374.1;Parent=gene-AC57_RS09060;Dbxref=GenBank:WP_001295374.1;Name=WP_001295374.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AC57_RS09060;product=urate/proton symporter UacT;protein_id=WP_001295374.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 38272 38397 . + . ID=gene-AC57_RS09055;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AC57_RS09055;old_locus_tag=AC57_3139 NZ_JJLR01000109.1 Protein Homology CDS 38272 38397 . + 0 ID=cds-WP_001050745.1;Parent=gene-AC57_RS09055;Dbxref=GenBank:WP_001050745.1;Name=WP_001050745.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AC57_RS09055;product=protein YqfG;protein_id=WP_001050745.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 38394 38465 . - . ID=gene-AC57_RS29930;Name=AC57_RS29930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29930 NZ_JJLR01000109.1 Protein Homology CDS 38394 38465 . - 0 ID=cds-WP_120795390.1;Parent=gene-AC57_RS29930;Dbxref=GenBank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AC57_RS29930;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 38520 39068 . + . ID=gene-AC57_RS09050;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AC57_RS09050;old_locus_tag=AC57_3140 NZ_JJLR01000109.1 Protein Homology CDS 38520 39068 . + 0 ID=cds-WP_001192790.1;Parent=gene-AC57_RS09050;Dbxref=GenBank:WP_001192790.1;Name=WP_001192790.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311788.1;locus_tag=AC57_RS09050;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192790.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 39111 40628 . - . ID=gene-AC57_RS09045;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AC57_RS09045;old_locus_tag=AC57_3141 NZ_JJLR01000109.1 Protein Homology CDS 39111 40628 . - 0 ID=cds-WP_000003071.1;Parent=gene-AC57_RS09045;Dbxref=GenBank:WP_000003071.1;Name=WP_000003071.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AC57_RS09045;product=lysine--tRNA ligase;protein_id=WP_000003071.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 40638 41736 . - . ID=gene-AC57_RS09040;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AC57_RS09040;old_locus_tag=AC57_3142 NZ_JJLR01000109.1 Protein Homology CDS 41662 41736 . - 0 ID=cds-WP_001701073.1;Parent=gene-AC57_RS09040;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AC57_RS09040;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJLR01000109.1 Protein Homology CDS 40638 41660 . - 0 ID=cds-WP_001701073.1;Parent=gene-AC57_RS09040;Dbxref=GenBank:WP_001701073.1;Name=WP_001701073.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AC57_RS09040;product=peptide chain release factor 2;protein_id=WP_001701073.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 41827 43560 . - . ID=gene-AC57_RS09035;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AC57_RS09035;old_locus_tag=AC57_3144 NZ_JJLR01000109.1 Protein Homology CDS 41827 43560 . - 0 ID=cds-WP_032237580.1;Parent=gene-AC57_RS09035;Dbxref=GenBank:WP_032237580.1;Name=WP_032237580.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417368.1;locus_tag=AC57_RS09035;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_032237580.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 43566 44276 . - . ID=gene-AC57_RS09030;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AC57_RS09030;old_locus_tag=AC57_3145 NZ_JJLR01000109.1 Protein Homology CDS 43566 44276 . - 0 ID=cds-WP_000715214.1;Parent=gene-AC57_RS09030;Dbxref=GenBank:WP_000715214.1;Name=WP_000715214.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AC57_RS09030;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_000715214.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 44301 45197 . - . ID=gene-AC57_RS09025;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AC57_RS09025;old_locus_tag=AC57_3146 NZ_JJLR01000109.1 Protein Homology CDS 44301 45197 . - 0 ID=cds-WP_000806638.1;Parent=gene-AC57_RS09025;Dbxref=GenBank:WP_000806638.1;Name=WP_000806638.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AC57_RS09025;product=site-specific tyrosine recombinase XerD;protein_id=WP_000806638.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 45309 45830 . + . ID=gene-AC57_RS09020;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AC57_RS09020;old_locus_tag=AC57_3147 NZ_JJLR01000109.1 Protein Homology CDS 45309 45830 . + 0 ID=cds-WP_001055874.1;Parent=gene-AC57_RS09020;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AC57_RS09020;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 45870 46277 . - . ID=gene-AC57_RS09015;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AC57_RS09015;old_locus_tag=AC57_3148 NZ_JJLR01000109.1 Protein Homology CDS 45870 46277 . - 0 ID=cds-WP_000244777.1;Parent=gene-AC57_RS09015;Dbxref=GenBank:WP_000244777.1;Name=WP_000244777.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AC57_RS09015;product=protein YgfX;protein_id=WP_000244777.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 46258 46524 . - . ID=gene-AC57_RS09010;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AC57_RS09010;old_locus_tag=AC57_3149 NZ_JJLR01000109.1 Protein Homology CDS 46258 46524 . - 0 ID=cds-WP_000354046.1;Parent=gene-AC57_RS09010;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AC57_RS09010;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 46767 47747 . + . ID=gene-AC57_RS09005;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AC57_RS09005;old_locus_tag=AC57_3150 NZ_JJLR01000109.1 Protein Homology CDS 46767 47747 . + 0 ID=cds-WP_000886062.1;Parent=gene-AC57_RS09005;Dbxref=GenBank:WP_000886062.1;Name=WP_000886062.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AC57_RS09005;product=tRNA-modifying protein YgfZ;protein_id=WP_000886062.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 47943 48602 . - . ID=gene-AC57_RS09000;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AC57_RS09000;old_locus_tag=AC57_3151 NZ_JJLR01000109.1 Protein Homology CDS 47943 48602 . - 0 ID=cds-WP_000250274.1;Parent=gene-AC57_RS09000;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AC57_RS09000;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 48766 49077 . - . ID=gene-AC57_RS08995;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AC57_RS08995;old_locus_tag=AC57_3152 NZ_JJLR01000109.1 Protein Homology CDS 48766 49077 . - 0 ID=cds-WP_001182954.1;Parent=gene-AC57_RS08995;Dbxref=GenBank:WP_001182954.1;Name=WP_001182954.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AC57_RS08995;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182954.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 49122 50555 . + . ID=gene-AC57_RS08990;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AC57_RS08990;old_locus_tag=AC57_3153 NZ_JJLR01000109.1 Protein Homology CDS 49122 50555 . + 0 ID=cds-WP_001338826.1;Parent=gene-AC57_RS08990;Dbxref=GenBank:WP_001338826.1;Name=WP_001338826.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708664.2;locus_tag=AC57_RS08990;product=6-phospho-beta-glucosidase BglA;protein_id=WP_001338826.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 50612 51355 . - . ID=gene-AC57_RS08985;Name=ygfF;gbkey=Gene;gene=ygfF;gene_biotype=protein_coding;locus_tag=AC57_RS08985;old_locus_tag=AC57_3154 NZ_JJLR01000109.1 Protein Homology CDS 50612 51355 . - 0 ID=cds-WP_000951962.1;Parent=gene-AC57_RS08985;Dbxref=GenBank:WP_000951962.1;Name=WP_000951962.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygfF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417378.1;locus_tag=AC57_RS08985;product=SDR family oxidoreductase;protein_id=WP_000951962.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 51622 54495 . - . ID=gene-AC57_RS08980;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AC57_RS08980;old_locus_tag=AC57_3155 NZ_JJLR01000109.1 Protein Homology CDS 51622 54495 . - 0 ID=cds-WP_000195062.1;Parent=gene-AC57_RS08980;Dbxref=GenBank:WP_000195062.1;Name=WP_000195062.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417379.1;locus_tag=AC57_RS08980;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_000195062.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 54614 55003 . - . ID=gene-AC57_RS08975;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AC57_RS08975;old_locus_tag=AC57_3156 NZ_JJLR01000109.1 Protein Homology CDS 54614 55003 . - 0 ID=cds-WP_001295377.1;Parent=gene-AC57_RS08975;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AC57_RS08975;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 55027 56121 . - . ID=gene-AC57_RS08970;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AC57_RS08970;old_locus_tag=AC57_3157 NZ_JJLR01000109.1 Protein Homology CDS 55027 56121 . - 0 ID=cds-WP_000068701.1;Parent=gene-AC57_RS08970;Dbxref=GenBank:WP_000068701.1;Name=WP_000068701.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AC57_RS08970;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068701.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 56411 56494 . + . ID=gene-AC57_RS29935;Name=AC57_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29935 NZ_JJLR01000109.1 Protein Homology CDS 56411 56494 . + 0 ID=cds-WP_122056850.1;Parent=gene-AC57_RS29935;Dbxref=GenBank:WP_122056850.1;Name=WP_122056850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AC57_RS29935;product=hypothetical protein;protein_id=WP_122056850.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 56568 57770 . - . ID=gene-AC57_RS08965;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AC57_RS08965;old_locus_tag=AC57_3158 NZ_JJLR01000109.1 Protein Homology CDS 56568 57770 . - 0 ID=cds-WP_001192185.1;Parent=gene-AC57_RS08965;Dbxref=GenBank:WP_001192185.1;Name=WP_001192185.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311804.1;locus_tag=AC57_RS08965;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_001192185.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 57793 58971 . - . ID=gene-AC57_RS08960;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AC57_RS08960;old_locus_tag=AC57_3159 NZ_JJLR01000109.1 Protein Homology CDS 57793 58971 . - 0 ID=cds-WP_000111199.1;Parent=gene-AC57_RS08960;Dbxref=GenBank:WP_000111199.1;Name=WP_000111199.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417383.1;locus_tag=AC57_RS08960;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_000111199.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 58968 60293 . - . ID=gene-AC57_RS08955;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AC57_RS08955;old_locus_tag=AC57_3160 NZ_JJLR01000109.1 Protein Homology CDS 58968 60293 . - 0 ID=cds-WP_032279643.1;Parent=gene-AC57_RS08955;Dbxref=GenBank:WP_032279643.1;Name=WP_032279643.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311806.1;locus_tag=AC57_RS08955;product=Xaa-Pro aminopeptidase;protein_id=WP_032279643.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 60319 60897 . - . ID=gene-AC57_RS08950;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AC57_RS08950;old_locus_tag=AC57_3161 NZ_JJLR01000109.1 Protein Homology CDS 60319 60897 . - 0 ID=cds-WP_001295378.1;Parent=gene-AC57_RS08950;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AC57_RS08950;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 61065 61394 . + . ID=gene-AC57_RS08945;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AC57_RS08945;old_locus_tag=AC57_3162 NZ_JJLR01000109.1 Protein Homology CDS 61065 61394 . + 0 ID=cds-WP_001276008.1;Parent=gene-AC57_RS08945;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AC57_RS08945;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 61436 61619 . + . ID=gene-AC57_RS26225;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AC57_RS26225 NZ_JJLR01000109.1 cmsearch ncRNA 61436 61619 . + . ID=rna-AC57_RS26225;Parent=gene-AC57_RS26225;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26225;product=6S RNA NZ_JJLR01000109.1 cmsearch exon 61436 61619 . + . ID=exon-AC57_RS26225-1;Parent=rna-AC57_RS26225;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26225;product=6S RNA NZ_JJLR01000109.1 RefSeq gene 61640 62242 . + . ID=gene-AC57_RS08940;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AC57_RS08940;old_locus_tag=AC57_3163 NZ_JJLR01000109.1 Protein Homology CDS 61640 62242 . + 0 ID=cds-WP_032237817.1;Parent=gene-AC57_RS08940;Dbxref=GenBank:WP_032237817.1;Name=WP_032237817.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AC57_RS08940;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_032237817.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 62343 62402 . - . ID=gene-AC57_RS27580;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AC57_RS27580 NZ_JJLR01000109.1 Protein Homology CDS 62343 62402 . - 0 ID=cds-WP_010723220.1;Parent=gene-AC57_RS27580;Dbxref=GenBank:WP_010723220.1;Name=WP_010723220.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AC57_RS27580;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_010723220.1;transl_table=11 NZ_JJLR01000109.1 RefSeq gene 62631 63863 . - . ID=gene-AC57_RS08935;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AC57_RS08935;old_locus_tag=AC57_3164 NZ_JJLR01000109.1 Protein Homology CDS 62631 63863 . - 0 ID=cds-WP_001151604.1;Parent=gene-AC57_RS08935;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AC57_RS08935;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JJLR01000109.1 RefSeq pseudogene 64166 64975 . + . ID=gene-AC57_RS08930;Name=AC57_RS08930;end_range=64975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS08930;old_locus_tag=AC57_3166;partial=true;pseudo=true NZ_JJLR01000109.1 Protein Homology CDS 64166 64975 . + 0 ID=cds-AC57_RS08930;Parent=gene-AC57_RS08930;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=64975,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS08930;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000110.1 1 9099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000110.1 RefSeq region 1 9099 . + . ID=NZ_JJLR01000110.1:1..9099;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000110.1 RefSeq gene 1 101 . + . ID=gene-AC57_RS30805;Name=AC57_RS30805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30805;partial=true;start_range=.,1 NZ_JJLR01000110.1 Protein Homology CDS 1 101 . + 2 ID=cds-WP_024202186.1;Parent=gene-AC57_RS30805;Dbxref=GenBank:WP_024202186.1;Name=WP_024202186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30805;partial=true;product=hypothetical protein;protein_id=WP_024202186.1;start_range=.,1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 291 950 . - . ID=gene-AC57_RS08925;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AC57_RS08925;old_locus_tag=AC57_3167 NZ_JJLR01000110.1 Protein Homology CDS 291 950 . - 0 ID=cds-WP_000189743.1;Parent=gene-AC57_RS08925;Dbxref=GenBank:WP_000189743.1;Name=WP_000189743.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AC57_RS08925;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_000189743.1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 1006 1236 . - . ID=gene-AC57_RS08920;Name=AC57_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08920;old_locus_tag=AC57_3168 NZ_JJLR01000110.1 Protein Homology CDS 1006 1236 . - 0 ID=cds-WP_001322018.1;Parent=gene-AC57_RS08920;Dbxref=GenBank:WP_001322018.1;Name=WP_001322018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AC57_RS08920;product=hypothetical protein;protein_id=WP_001322018.1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 1378 2271 . + . ID=gene-AC57_RS08915;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AC57_RS08915;old_locus_tag=AC57_3169 NZ_JJLR01000110.1 Protein Homology CDS 1378 2271 . + 0 ID=cds-WP_000828351.1;Parent=gene-AC57_RS08915;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AC57_RS08915;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 2475 4619 . + . ID=gene-AC57_RS08910;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AC57_RS08910;old_locus_tag=AC57_3170 NZ_JJLR01000110.1 Protein Homology CDS 2475 4619 . + 0 ID=cds-WP_032237819.1;Parent=gene-AC57_RS08910;Dbxref=GenBank:WP_032237819.1;Name=WP_032237819.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=AC57_RS08910;product=methylmalonyl-CoA mutase;protein_id=WP_032237819.1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 4612 5607 . + . ID=gene-AC57_RS08905;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AC57_RS08905;old_locus_tag=AC57_3171 NZ_JJLR01000110.1 Protein Homology CDS 4612 5607 . + 0 ID=cds-WP_000606525.1;Parent=gene-AC57_RS08905;Dbxref=GenBank:WP_000606525.1;Name=WP_000606525.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AC57_RS08905;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_000606525.1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 5618 6403 . + . ID=gene-AC57_RS08900;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AC57_RS08900;old_locus_tag=AC57_3172 NZ_JJLR01000110.1 Protein Homology CDS 5618 6403 . + 0 ID=cds-WP_000122080.1;Parent=gene-AC57_RS08900;Dbxref=GenBank:WP_000122080.1;Name=WP_000122080.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AC57_RS08900;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122080.1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 6427 7905 . + . ID=gene-AC57_RS08895;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AC57_RS08895;old_locus_tag=AC57_3173 NZ_JJLR01000110.1 Protein Homology CDS 6427 7905 . + 0 ID=cds-WP_000449965.1;Parent=gene-AC57_RS08895;Dbxref=GenBank:WP_000449965.1;Name=WP_000449965.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417395.1;locus_tag=AC57_RS08895;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449965.1;transl_table=11 NZ_JJLR01000110.1 RefSeq gene 7902 8774 . - . ID=gene-AC57_RS08890;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AC57_RS08890;old_locus_tag=AC57_3174 NZ_JJLR01000110.1 Protein Homology CDS 7902 8774 . - 0 ID=cds-WP_001381404.1;Parent=gene-AC57_RS08890;Dbxref=GenBank:WP_001381404.1;Name=WP_001381404.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AC57_RS08890;product=LysR family transcriptional regulator SrsR;protein_id=WP_001381404.1;transl_table=11 NZ_JJLR01000110.1 RefSeq pseudogene 8795 9099 . - . ID=gene-AC57_RS08885;Name=AC57_RS08885;end_range=9099,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS08885;old_locus_tag=AC57_3175;partial=true;pseudo=true NZ_JJLR01000110.1 Protein Homology CDS 8795 9099 . - 2 ID=cds-AC57_RS08885;Parent=gene-AC57_RS08885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=9099,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS08885;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000111.1 1 17179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000111.1 RefSeq region 1 17179 . + . ID=NZ_JJLR01000111.1:1..17179;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000111.1 RefSeq pseudogene 1 279 . - . ID=gene-AC57_RS08880;Name=AC57_RS08880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS08880;old_locus_tag=AC57_3176;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000111.1 Protein Homology CDS 1 279 . - 0 ID=cds-AC57_RS08880;Parent=gene-AC57_RS08880;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS08880;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 426 638 . + . ID=gene-AC57_RS08875;Name=AC57_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08875;old_locus_tag=AC57_3177 NZ_JJLR01000111.1 Protein Homology CDS 426 638 . + 0 ID=cds-WP_001460380.1;Parent=gene-AC57_RS08875;Dbxref=GenBank:WP_001460380.1;Name=WP_001460380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000796434.1;locus_tag=AC57_RS08875;product=hypothetical protein;protein_id=WP_001460380.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 660 887 . - . ID=gene-AC57_RS08870;Name=AC57_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08870;old_locus_tag=AC57_3178 NZ_JJLR01000111.1 Protein Homology CDS 660 887 . - 0 ID=cds-WP_032237307.1;Parent=gene-AC57_RS08870;Dbxref=GenBank:WP_032237307.1;Name=WP_032237307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965727.1;locus_tag=AC57_RS08870;product=antitoxin VbhA family protein;protein_id=WP_032237307.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 874 1764 . - . ID=gene-AC57_RS08865;Name=AC57_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08865;old_locus_tag=AC57_3179 NZ_JJLR01000111.1 Protein Homology CDS 874 1764 . - 0 ID=cds-WP_032237306.1;Parent=gene-AC57_RS08865;Dbxref=GenBank:WP_032237306.1;Name=WP_032237306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395310.1;locus_tag=AC57_RS08865;product=hypothetical protein;protein_id=WP_032237306.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 1774 2847 . - . ID=gene-AC57_RS08860;Name=AC57_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08860;old_locus_tag=AC57_3180 NZ_JJLR01000111.1 Protein Homology CDS 1774 2847 . - 0 ID=cds-WP_032237305.1;Parent=gene-AC57_RS08860;Dbxref=GenBank:WP_032237305.1;Name=WP_032237305.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239453.1;locus_tag=AC57_RS08860;product=site-specific integrase;protein_id=WP_032237305.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 2873 2984 . + . ID=gene-AC57_RS29940;Name=AC57_RS29940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS29940 NZ_JJLR01000111.1 tRNAscan-SE tRNA 2873 2984 . + . ID=rna-AC57_RS29940;Parent=gene-AC57_RS29940;anticodon=(pos:2964..2966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS29940;product=tRNA-Ser NZ_JJLR01000111.1 tRNAscan-SE exon 2873 2984 . + . ID=exon-AC57_RS29940-1;Parent=rna-AC57_RS29940;anticodon=(pos:2964..2966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS29940;product=tRNA-Ser NZ_JJLR01000111.1 RefSeq gene 3366 3707 . - . ID=gene-AC57_RS08855;Name=ykfI;gbkey=Gene;gene=ykfI;gene_biotype=protein_coding;locus_tag=AC57_RS08855;old_locus_tag=AC57_3181 NZ_JJLR01000111.1 Protein Homology CDS 3366 3707 . - 0 ID=cds-WP_000854680.1;Parent=gene-AC57_RS08855;Dbxref=GenBank:WP_000854680.1;Name=WP_000854680.1;gbkey=CDS;gene=ykfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414779.1;locus_tag=AC57_RS08855;product=type IV toxin-antitoxin system toxin YkfI;protein_id=WP_000854680.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 3728 4045 . - . ID=gene-AC57_RS08850;Name=yafW;gbkey=Gene;gene=yafW;gene_biotype=protein_coding;locus_tag=AC57_RS08850;old_locus_tag=AC57_3182 NZ_JJLR01000111.1 Protein Homology CDS 3728 4045 . - 0 ID=cds-WP_000070396.1;Parent=gene-AC57_RS08850;Dbxref=GenBank:WP_000070396.1;Name=WP_000070396.1;gbkey=CDS;gene=yafW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414780.1;locus_tag=AC57_RS08850;product=type IV toxin-antitoxin system antitoxin YafW;protein_id=WP_000070396.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 4064 4285 . - . ID=gene-AC57_RS27590;Name=ykfH;gbkey=Gene;gene=ykfH;gene_biotype=protein_coding;locus_tag=AC57_RS27590;old_locus_tag=AC57_3183 NZ_JJLR01000111.1 Protein Homology CDS 4064 4285 . - 0 ID=cds-WP_000691994.1;Parent=gene-AC57_RS27590;Dbxref=GenBank:WP_000691994.1;Name=WP_000691994.1;gbkey=CDS;gene=ykfH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588435.1;locus_tag=AC57_RS27590;product=DUF987 domain-containing protein;protein_id=WP_000691994.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 4294 4770 . - . ID=gene-AC57_RS08845;Name=ykfG;gbkey=Gene;gene=ykfG;gene_biotype=protein_coding;locus_tag=AC57_RS08845;old_locus_tag=AC57_3184 NZ_JJLR01000111.1 Protein Homology CDS 4294 4770 . - 0 ID=cds-WP_000811693.1;Parent=gene-AC57_RS08845;Dbxref=GenBank:WP_000811693.1;Name=WP_000811693.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;gene=ykfG;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414781.1;locus_tag=AC57_RS08845;product=JAB domain-containing protein;protein_id=WP_000811693.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 4786 5244 . - . ID=gene-AC57_RS08840;Name=AC57_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08840;old_locus_tag=AC57_3185 NZ_JJLR01000111.1 Protein Homology CDS 4786 5244 . - 0 ID=cds-WP_032177818.1;Parent=gene-AC57_RS08840;Dbxref=GenBank:WP_032177818.1;Name=WP_032177818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414782.1;locus_tag=AC57_RS08840;product=antirestriction protein;protein_id=WP_032177818.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 5342 5581 . - . ID=gene-AC57_RS08835;Name=ykfF;gbkey=Gene;gene=ykfF;gene_biotype=protein_coding;locus_tag=AC57_RS08835;old_locus_tag=AC57_3186 NZ_JJLR01000111.1 Protein Homology CDS 5342 5581 . - 0 ID=cds-WP_032237304.1;Parent=gene-AC57_RS08835;Dbxref=GenBank:WP_032237304.1;Name=WP_032237304.1;gbkey=CDS;gene=ykfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414783.1;locus_tag=AC57_RS08835;product=DUF905 domain-containing protein;protein_id=WP_032237304.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 5658 6125 . - . ID=gene-AC57_RS08830;Name=ykfB;gbkey=Gene;gene=ykfB;gene_biotype=protein_coding;locus_tag=AC57_RS08830;old_locus_tag=AC57_3187 NZ_JJLR01000111.1 Protein Homology CDS 5658 6125 . - 0 ID=cds-WP_032200803.1;Parent=gene-AC57_RS08830;Dbxref=GenBank:WP_032200803.1;Name=WP_032200803.1;gbkey=CDS;gene=ykfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414784.1;locus_tag=AC57_RS08830;product=protein YkfB;protein_id=WP_032200803.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 6148 6591 . - . ID=gene-AC57_RS08825;Name=yafY;gbkey=Gene;gene=yafY;gene_biotype=protein_coding;locus_tag=AC57_RS08825;old_locus_tag=AC57_3188 NZ_JJLR01000111.1 Protein Homology CDS 6148 6591 . - 0 ID=cds-WP_032177819.1;Parent=gene-AC57_RS08825;Dbxref=GenBank:WP_032177819.1;Name=WP_032177819.1;gbkey=CDS;gene=yafY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414785.4;locus_tag=AC57_RS08825;product=YfjS/YafY family lipoprotein;protein_id=WP_032177819.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 6591 6827 . - . ID=gene-AC57_RS08820;Name=ypjK;gbkey=Gene;gene=ypjK;gene_biotype=protein_coding;locus_tag=AC57_RS08820;old_locus_tag=AC57_3189 NZ_JJLR01000111.1 Protein Homology CDS 6591 6827 . - 0 ID=cds-WP_001144031.1;Parent=gene-AC57_RS08820;Dbxref=GenBank:WP_001144031.1;Name=WP_001144031.1;gbkey=CDS;gene=ypjK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001144029.1;locus_tag=AC57_RS08820;product=protein YpjK;protein_id=WP_001144031.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 6868 7569 . - . ID=gene-AC57_RS08815;Name=yfjR;gbkey=Gene;gene=yfjR;gene_biotype=protein_coding;locus_tag=AC57_RS08815;old_locus_tag=AC57_3190 NZ_JJLR01000111.1 Protein Homology CDS 6868 7569 . - 0 ID=cds-WP_032237303.1;Parent=gene-AC57_RS08815;Dbxref=GenBank:WP_032237303.1;Name=WP_032237303.1;gbkey=CDS;gene=yfjR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417123.1;locus_tag=AC57_RS08815;product=WYL domain-containing protein;protein_id=WP_032237303.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 7786 8607 . - . ID=gene-AC57_RS08810;Name=AC57_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08810;old_locus_tag=AC57_3191 NZ_JJLR01000111.1 Protein Homology CDS 7786 8607 . - 0 ID=cds-WP_032200808.1;Parent=gene-AC57_RS08810;Dbxref=GenBank:WP_032200808.1;Name=WP_032200808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414786.4;locus_tag=AC57_RS08810;product=DUF932 domain-containing protein;protein_id=WP_032200808.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 8699 9562 . - . ID=gene-AC57_RS08805;Name=AC57_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08805;old_locus_tag=AC57_3192 NZ_JJLR01000111.1 Protein Homology CDS 8699 9562 . - 0 ID=cds-WP_032200809.1;Parent=gene-AC57_RS08805;Dbxref=GenBank:WP_032200809.1;Name=WP_032200809.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414787.4;locus_tag=AC57_RS08805;product=GTPase family protein;protein_id=WP_032200809.1;transl_table=11 NZ_JJLR01000111.1 RefSeq pseudogene 10678 11253 . + . ID=gene-AC57_RS29230;Name=AC57_RS29230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29230;partial=true;pseudo=true;start_range=.,10678 NZ_JJLR01000111.1 Protein Homology CDS 10678 11253 . + 0 ID=cds-AC57_RS29230;Parent=gene-AC57_RS29230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270155.1;locus_tag=AC57_RS29230;partial=true;product=IS5 family transposase;pseudo=true;start_range=.,10678;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 11478 12629 . - . ID=gene-AC57_RS08795;Name=AC57_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08795;old_locus_tag=AC57_3194 NZ_JJLR01000111.1 Protein Homology CDS 11478 12629 . - 0 ID=cds-WP_000323729.1;Parent=gene-AC57_RS08795;Dbxref=GenBank:WP_000323729.1;Name=WP_000323729.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323730.1;locus_tag=AC57_RS08795;product=S1C family serine protease;protein_id=WP_000323729.1;transl_table=11 NZ_JJLR01000111.1 RefSeq pseudogene 12654 13342 . - . ID=gene-AC57_RS08790;Name=AC57_RS08790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS08790;old_locus_tag=AC57_3195;pseudo=true NZ_JJLR01000111.1 Protein Homology CDS 12654 13342 . - 0 ID=cds-AC57_RS08790;Parent=gene-AC57_RS08790;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196690.1;locus_tag=AC57_RS08790;product=M48 family metalloprotease;pseudo=true;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 13320 13817 . - . ID=gene-AC57_RS08785;Name=psiE-GI;gbkey=Gene;gene=psiE-GI;gene_biotype=protein_coding;locus_tag=AC57_RS08785;old_locus_tag=AC57_3196 NZ_JJLR01000111.1 Protein Homology CDS 13320 13817 . - 0 ID=cds-WP_000843382.1;Parent=gene-AC57_RS08785;Dbxref=GenBank:WP_000843382.1;Name=WP_000843382.1;gbkey=CDS;gene=psiE-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843382.1;locus_tag=AC57_RS08785;product=heat resistance protein PsiE-GI;protein_id=WP_000843382.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 13814 15526 . - . ID=gene-AC57_RS08780;Name=kefB-GI;gbkey=Gene;gene=kefB-GI;gene_biotype=protein_coding;locus_tag=AC57_RS08780;old_locus_tag=AC57_3197 NZ_JJLR01000111.1 Protein Homology CDS 13814 15526 . - 0 ID=cds-WP_032280008.1;Parent=gene-AC57_RS08780;Dbxref=GenBank:WP_032280008.1;Name=WP_032280008.1;gbkey=CDS;gene=kefB-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156527.1;locus_tag=AC57_RS08780;product=heat resistance system K+/H+ antiporter KefB-GI;protein_id=WP_032280008.1;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 15530 15970 . - . ID=gene-AC57_RS0124800;Name=trx-GI;gbkey=Gene;gene=trx-GI;gene_biotype=protein_coding;locus_tag=AC57_RS0124800 NZ_JJLR01000111.1 Protein Homology CDS 15530 15970 . - 0 ID=cds-WP_000786816.1;Parent=gene-AC57_RS0124800;Dbxref=GenBank:WP_000786816.1;Name=WP_000786816.1;gbkey=CDS;gene=trx-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786816.1;locus_tag=AC57_RS0124800;product=heat resistance system thioredoxin Trx-GI;protein_id=WP_000786816.1;transl_table=11 NZ_JJLR01000111.1 RefSeq pseudogene 15960 16469 . - . ID=gene-AC57_RS0124805;Name=AC57_RS0124805;end_range=16469,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124805;partial=true;pseudo=true NZ_JJLR01000111.1 Protein Homology CDS 15960 16469 . - 0 ID=cds-AC57_RS0124805;Parent=gene-AC57_RS0124805;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=16469,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166993.1;locus_tag=AC57_RS0124805;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000111.1 RefSeq gene 16487 17179 . - . ID=gene-AC57_RS08775;Name=AC57_RS08775;end_range=17179,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08775;old_locus_tag=AC57_3199;partial=true NZ_JJLR01000111.1 Protein Homology CDS 16935 17179 . - 1 ID=cds-WP_249401511.1;Parent=gene-AC57_RS08775;Dbxref=GenBank:WP_249401511.1;Name=WP_249401511.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=17179,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC57_RS08775;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_249401511.1;transl_table=11 NZ_JJLR01000111.1 Protein Homology CDS 16487 16935 . - 2 ID=cds-WP_249401511.1;Parent=gene-AC57_RS08775;Dbxref=GenBank:WP_249401511.1;Name=WP_249401511.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC57_RS08775;partial=true;product=IS1-like element IS1B family transposase;protein_id=WP_249401511.1;transl_table=11 ##sequence-region NZ_JJLR01000112.1 1 56770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000112.1 RefSeq region 1 56770 . + . ID=NZ_JJLR01000112.1:1..56770;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000112.1 RefSeq gene 1 230 . - . ID=gene-AC57_RS0124815;Name=AC57_RS0124815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124815;old_locus_tag=AC57_3200;partial=true;start_range=.,1 NZ_JJLR01000112.1 Protein Homology CDS 1 230 . - 0 ID=cds-WP_001397795.1-2;Parent=gene-AC57_RS0124815;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124815;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;start_range=.,1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 479 1219 . - . ID=gene-AC57_RS08770;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AC57_RS08770;old_locus_tag=AC57_3201 NZ_JJLR01000112.1 Protein Homology CDS 479 1219 . - 0 ID=cds-WP_000669834.1;Parent=gene-AC57_RS08770;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AC57_RS08770;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 1312 1947 . - . ID=gene-AC57_RS08765;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AC57_RS08765;old_locus_tag=AC57_3202 NZ_JJLR01000112.1 Protein Homology CDS 1312 1947 . - 0 ID=cds-WP_000493352.1;Parent=gene-AC57_RS08765;Dbxref=GenBank:WP_000493352.1;Name=WP_000493352.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=AC57_RS08765;product=arginine exporter ArgO;protein_id=WP_000493352.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 2086 2946 . - . ID=gene-AC57_RS08760;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AC57_RS08760;old_locus_tag=AC57_3203 NZ_JJLR01000112.1 Protein Homology CDS 2086 2946 . - 0 ID=cds-WP_001723866.1;Parent=gene-AC57_RS08760;Dbxref=GenBank:WP_001723866.1;Name=WP_001723866.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AC57_RS08760;product=small-conductance mechanosensitive channel MscS;protein_id=WP_001723866.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 3304 4383 . - . ID=gene-AC57_RS08755;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AC57_RS08755;old_locus_tag=AC57_3204 NZ_JJLR01000112.1 Protein Homology CDS 3304 4383 . - 0 ID=cds-WP_000034372.1;Parent=gene-AC57_RS08755;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AC57_RS08755;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 4598 5761 . - . ID=gene-AC57_RS08750;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AC57_RS08750;old_locus_tag=AC57_3205 NZ_JJLR01000112.1 Protein Homology CDS 4598 5761 . - 0 ID=cds-WP_000111269.1;Parent=gene-AC57_RS08750;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AC57_RS08750;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 5811 6830 . - . ID=gene-AC57_RS08745;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AC57_RS08745;old_locus_tag=AC57_3206 NZ_JJLR01000112.1 Protein Homology CDS 5811 6830 . - 0 ID=cds-WP_001560577.1;Parent=gene-AC57_RS08745;Dbxref=GenBank:WP_001560577.1;Name=WP_001560577.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AC57_RS08745;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_001560577.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 7115 7828 . - . ID=gene-AC57_RS08740;Name=yggC;gbkey=Gene;gene=yggC;gene_biotype=protein_coding;locus_tag=AC57_RS08740;old_locus_tag=AC57_3207 NZ_JJLR01000112.1 Protein Homology CDS 7115 7828 . - 0 ID=cds-WP_000687775.1;Parent=gene-AC57_RS08740;Dbxref=GenBank:WP_000687775.1;Name=WP_000687775.1;gbkey=CDS;gene=yggC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417403.1;locus_tag=AC57_RS08740;product=nucleoside/nucleotide kinase family protein;protein_id=WP_000687775.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 7825 8334 . - . ID=gene-AC57_RS08735;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AC57_RS08735;old_locus_tag=AC57_3208 NZ_JJLR01000112.1 Protein Homology CDS 7825 8334 . - 0 ID=cds-WP_000224147.1;Parent=gene-AC57_RS08735;Dbxref=GenBank:WP_000224147.1;Name=WP_000224147.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417404.1;locus_tag=AC57_RS08735;product=fumarase E;protein_id=WP_000224147.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 8356 9321 . - . ID=gene-AC57_RS08730;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AC57_RS08730;old_locus_tag=AC57_3209 NZ_JJLR01000112.1 Protein Homology CDS 8356 9321 . - 0 ID=cds-WP_000987283.1;Parent=gene-AC57_RS08730;Dbxref=GenBank:WP_000987283.1;Name=WP_000987283.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AC57_RS08730;product=class II fructose-bisphosphatase;protein_id=WP_000987283.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 9318 10595 . - . ID=gene-AC57_RS08725;Name=yggP;gbkey=Gene;gene=yggP;gene_biotype=protein_coding;locus_tag=AC57_RS08725;old_locus_tag=AC57_3210 NZ_JJLR01000112.1 Protein Homology CDS 9318 10595 . - 0 ID=cds-WP_000853247.1;Parent=gene-AC57_RS08725;Dbxref=GenBank:WP_000853247.1;Name=WP_000853247.1;gbkey=CDS;gene=yggP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026187.1;locus_tag=AC57_RS08725;product=zinc-binding dehydrogenase;protein_id=WP_000853247.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 10610 11998 . - . ID=gene-AC57_RS08720;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=AC57_RS08720;old_locus_tag=AC57_3211 NZ_JJLR01000112.1 Protein Homology CDS 10610 11998 . - 0 ID=cds-WP_000428805.1;Parent=gene-AC57_RS08720;Dbxref=GenBank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AC57_RS08720;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 12053 12469 . - . ID=gene-AC57_RS08715;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AC57_RS08715;old_locus_tag=AC57_3212 NZ_JJLR01000112.1 Protein Homology CDS 12053 12469 . - 0 ID=cds-WP_001239647.1;Parent=gene-AC57_RS08715;Dbxref=GenBank:WP_001239647.1;Name=WP_001239647.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239647.1;locus_tag=AC57_RS08715;product=PTS mannitol transporter subunit IIA;protein_id=WP_001239647.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 12783 14774 . - . ID=gene-AC57_RS08710;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AC57_RS08710;old_locus_tag=AC57_3214 NZ_JJLR01000112.1 Protein Homology CDS 12783 14774 . - 0 ID=cds-WP_000098614.1;Parent=gene-AC57_RS08710;Dbxref=GenBank:WP_000098614.1;Name=WP_000098614.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026188.1;locus_tag=AC57_RS08710;product=transketolase;protein_id=WP_000098614.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 15052 15810 . + . ID=gene-AC57_RS08705;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AC57_RS08705;old_locus_tag=AC57_3215 NZ_JJLR01000112.1 Protein Homology CDS 15052 15810 . + 0 ID=cds-WP_001319878.1;Parent=gene-AC57_RS08705;Dbxref=GenBank:WP_001319878.1;Name=WP_001319878.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417411.2;locus_tag=AC57_RS08705;product=metalloprotease LoiP;protein_id=WP_001319878.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 16016 16936 . - . ID=gene-AC57_RS08700;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AC57_RS08700;old_locus_tag=AC57_3216 NZ_JJLR01000112.1 Protein Homology CDS 16016 16936 . - 0 ID=cds-WP_000105566.1;Parent=gene-AC57_RS08700;Dbxref=GenBank:WP_000105566.1;Name=WP_000105566.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AC57_RS08700;product=agmatinase;protein_id=WP_000105566.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 17074 19050 . - . ID=gene-AC57_RS08695;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AC57_RS08695;old_locus_tag=AC57_3217 NZ_JJLR01000112.1 Protein Homology CDS 17074 19050 . - 0 ID=cds-WP_001300904.1;Parent=gene-AC57_RS08695;Dbxref=GenBank:WP_001300904.1;Name=WP_001300904.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417413.1;locus_tag=AC57_RS08695;product=biosynthetic arginine decarboxylase;protein_id=WP_001300904.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 19059 19190 . - . ID=gene-AC57_RS08690;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AC57_RS08690;old_locus_tag=AC57_3218 NZ_JJLR01000112.1 Protein Homology CDS 19059 19190 . - 0 ID=cds-WP_001297406.1;Parent=gene-AC57_RS08690;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AC57_RS08690;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 19284 19427 . - . ID=gene-AC57_RS31045;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AC57_RS31045;old_locus_tag=AC57_3219 NZ_JJLR01000112.1 Protein Homology CDS 19284 19427 . - 0 ID=cds-WP_001297404.1;Parent=gene-AC57_RS31045;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AC57_RS31045;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 19538 19789 . - . ID=gene-AC57_RS31050;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AC57_RS31050 NZ_JJLR01000112.1 Protein Homology CDS 19538 19789 . - 0 ID=cds-WP_001326496.1;Parent=gene-AC57_RS31050;Dbxref=GenBank:WP_001326496.1;Name=WP_001326496.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AC57_RS31050;product=protein YqgD;protein_id=WP_001326496.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 19845 20999 . + . ID=gene-AC57_RS08685;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AC57_RS08685;old_locus_tag=AC57_3221 NZ_JJLR01000112.1 Protein Homology CDS 19845 20999 . + 0 ID=cds-WP_001062128.1;Parent=gene-AC57_RS08685;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AC57_RS08685;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 21423 22817 . + . ID=gene-AC57_RS08680;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AC57_RS08680;old_locus_tag=AC57_3222 NZ_JJLR01000112.1 Protein Homology CDS 21423 22817 . + 0 ID=cds-WP_001112301.1;Parent=gene-AC57_RS08680;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AC57_RS08680;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 22894 23391 . + . ID=gene-AC57_RS08675;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AC57_RS08675;old_locus_tag=AC57_3223 NZ_JJLR01000112.1 Protein Homology CDS 22894 23391 . + 0 ID=cds-WP_001300769.1;Parent=gene-AC57_RS08675;Dbxref=GenBank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AC57_RS08675;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001300769.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 23486 24193 . + . ID=gene-AC57_RS08670;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AC57_RS08670;old_locus_tag=AC57_3224 NZ_JJLR01000112.1 Protein Homology CDS 23486 24193 . + 0 ID=cds-WP_000286500.1;Parent=gene-AC57_RS08670;Dbxref=GenBank:WP_000286500.1;Name=WP_000286500.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AC57_RS08670;product=deoxyribonuclease I;protein_id=WP_000286500.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 24273 25004 . + . ID=gene-AC57_RS08665;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AC57_RS08665;old_locus_tag=AC57_3225 NZ_JJLR01000112.1 Protein Homology CDS 24273 25004 . + 0 ID=cds-WP_001300912.1;Parent=gene-AC57_RS08665;Dbxref=GenBank:WP_001300912.1;Name=WP_001300912.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AC57_RS08665;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001300912.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 25017 25967 . + . ID=gene-AC57_RS08660;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AC57_RS08660;old_locus_tag=AC57_3226 NZ_JJLR01000112.1 Protein Homology CDS 25017 25967 . + 0 ID=cds-WP_000593273.1;Parent=gene-AC57_RS08660;Dbxref=GenBank:WP_000593273.1;Name=WP_000593273.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AC57_RS08660;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 26076 26639 . + . ID=gene-AC57_RS08655;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AC57_RS08655;old_locus_tag=AC57_3227 NZ_JJLR01000112.1 Protein Homology CDS 26076 26639 . + 0 ID=cds-WP_001053178.1;Parent=gene-AC57_RS08655;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AC57_RS08655;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 26639 27055 . + . ID=gene-AC57_RS08650;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AC57_RS08650;old_locus_tag=AC57_3228 NZ_JJLR01000112.1 Protein Homology CDS 26639 27055 . + 0 ID=cds-WP_000017111.1;Parent=gene-AC57_RS08650;Dbxref=GenBank:WP_000017111.1;Name=WP_000017111.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708714.1;locus_tag=AC57_RS08650;product=Holliday junction resolvase RuvX;protein_id=WP_000017111.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 27230 28210 . - . ID=gene-AC57_RS08645;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=AC57_RS08645;old_locus_tag=AC57_3229 NZ_JJLR01000112.1 Protein Homology CDS 27230 28210 . - 0 ID=cds-WP_071999886.1;Parent=gene-AC57_RS08645;Dbxref=GenBank:WP_071999886.1;Name=WP_071999886.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417425.2;locus_tag=AC57_RS08645;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_071999886.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 28228 28932 . + . ID=gene-AC57_RS08640;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AC57_RS08640;old_locus_tag=AC57_3230 NZ_JJLR01000112.1 Protein Homology CDS 28228 28932 . + 0 ID=cds-WP_000997795.1;Parent=gene-AC57_RS08640;Dbxref=GenBank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AC57_RS08640;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 28950 29516 . + . ID=gene-AC57_RS08635;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AC57_RS08635;old_locus_tag=AC57_3231 NZ_JJLR01000112.1 Protein Homology CDS 28950 29516 . + 0 ID=cds-WP_032237483.1;Parent=gene-AC57_RS08635;Dbxref=GenBank:WP_032237483.1;Name=WP_032237483.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AC57_RS08635;product=osmotic shock tolerance protein YggT;protein_id=WP_032237483.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 29513 29803 . + . ID=gene-AC57_RS08630;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AC57_RS08630;old_locus_tag=AC57_3232 NZ_JJLR01000112.1 Protein Homology CDS 29513 29803 . + 0 ID=cds-WP_001277222.1;Parent=gene-AC57_RS08630;Dbxref=GenBank:WP_001277222.1;Name=WP_001277222.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AC57_RS08630;product=DUF167 family protein YggU;protein_id=WP_001277222.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 29811 30404 . + . ID=gene-AC57_RS08625;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AC57_RS08625;old_locus_tag=AC57_3233 NZ_JJLR01000112.1 Protein Homology CDS 29811 30404 . + 0 ID=cds-WP_001174735.1;Parent=gene-AC57_RS08625;Dbxref=GenBank:WP_001174735.1;Name=WP_001174735.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;gene=rdgB;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708719.1;locus_tag=AC57_RS08625;product=XTP/dITP diphosphatase;protein_id=WP_001174735.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 30397 31533 . + . ID=gene-AC57_RS08620;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AC57_RS08620;old_locus_tag=AC57_3234 NZ_JJLR01000112.1 Protein Homology CDS 30397 31533 . + 0 ID=cds-WP_000239928.1;Parent=gene-AC57_RS08620;Dbxref=GenBank:WP_000239928.1;Name=WP_000239928.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708720.1;locus_tag=AC57_RS08620;product=radical SAM family heme chaperone HemW;protein_id=WP_000239928.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 31688 32695 . - . ID=gene-AC57_RS08615;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AC57_RS08615;old_locus_tag=AC57_3235 NZ_JJLR01000112.1 Protein Homology CDS 31688 32695 . - 0 ID=cds-WP_032237482.1;Parent=gene-AC57_RS08615;Dbxref=GenBank:WP_032237482.1;Name=WP_032237482.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417431.1;locus_tag=AC57_RS08615;product=DUF1202 family protein;protein_id=WP_032237482.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 32812 33858 . - . ID=gene-AC57_RS08610;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AC57_RS08610;old_locus_tag=AC57_3236 NZ_JJLR01000112.1 Protein Homology CDS 32812 33858 . - 0 ID=cds-WP_000394125.1;Parent=gene-AC57_RS08610;Dbxref=GenBank:WP_000394125.1;Name=WP_000394125.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708728.1;locus_tag=AC57_RS08610;product=L-asparaginase 2;protein_id=WP_000394125.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 34034 34753 . - . ID=gene-AC57_RS08605;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AC57_RS08605;old_locus_tag=AC57_3237 NZ_JJLR01000112.1 Protein Homology CDS 34034 34753 . - 0 ID=cds-WP_000984796.1;Parent=gene-AC57_RS08605;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AC57_RS08605;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 34937 35263 . - . ID=gene-AC57_RS08595;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AC57_RS08595;old_locus_tag=AC57_3239 NZ_JJLR01000112.1 Protein Homology CDS 34937 35263 . - 0 ID=cds-WP_001107564.1;Parent=gene-AC57_RS08595;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AC57_RS08595;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 35263 35982 . - . ID=gene-AC57_RS08590;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AC57_RS08590;old_locus_tag=AC57_3240 NZ_JJLR01000112.1 Protein Homology CDS 35263 35982 . - 0 ID=cds-WP_000786911.1;Parent=gene-AC57_RS08590;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AC57_RS08590;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 36143 37195 . + . ID=gene-AC57_RS08585;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AC57_RS08585;old_locus_tag=AC57_3241 NZ_JJLR01000112.1 Protein Homology CDS 36143 37195 . + 0 ID=cds-WP_032237481.1;Parent=gene-AC57_RS08585;Dbxref=GenBank:WP_032237481.1;Name=WP_032237481.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417436.1;locus_tag=AC57_RS08585;product=A/G-specific adenine glycosylase;protein_id=WP_032237481.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 37223 37498 . + . ID=gene-AC57_RS08580;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AC57_RS08580;old_locus_tag=AC57_3242 NZ_JJLR01000112.1 Protein Homology CDS 37223 37498 . + 0 ID=cds-WP_000091700.1;Parent=gene-AC57_RS08580;Dbxref=GenBank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AC57_RS08580;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 37563 38642 . + . ID=gene-AC57_RS08575;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AC57_RS08575;old_locus_tag=AC57_3243 NZ_JJLR01000112.1 Protein Homology CDS 37563 38642 . + 0 ID=cds-WP_000760323.1;Parent=gene-AC57_RS08575;Dbxref=GenBank:WP_000760323.1;Name=WP_000760323.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AC57_RS08575;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_000760323.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 38844 40100 . + . ID=gene-AC57_RS08570;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AC57_RS08570;old_locus_tag=AC57_3245 NZ_JJLR01000112.1 Protein Homology CDS 38844 40100 . + 0 ID=cds-WP_001049791.1;Parent=gene-AC57_RS08570;Dbxref=GenBank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AC57_RS08570;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 40150 42285 . - . ID=gene-AC57_RS08565;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AC57_RS08565;old_locus_tag=AC57_3246 NZ_JJLR01000112.1 Protein Homology CDS 40150 42285 . - 0 ID=cds-WP_000839760.1;Parent=gene-AC57_RS08565;Dbxref=GenBank:WP_000839760.1;Name=WP_000839760.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417440.4;locus_tag=AC57_RS08565;product=ornithine decarboxylase;protein_id=WP_000839760.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 42447 42530 . - . ID=gene-AC57_RS30545;Name=yqgH;gbkey=Gene;gene=yqgH;gene_biotype=protein_coding;locus_tag=AC57_RS30545 NZ_JJLR01000112.1 Protein Homology CDS 42447 42530 . - 0 ID=cds-WP_211180506.1;Parent=gene-AC57_RS30545;Dbxref=GenBank:WP_211180506.1;Name=WP_211180506.1;gbkey=CDS;gene=yqgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AC57_RS30545;product=protein YqgH;protein_id=WP_211180506.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 42683 43390 . + . ID=gene-AC57_RS08560;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AC57_RS08560;old_locus_tag=AC57_3247 NZ_JJLR01000112.1 Protein Homology CDS 42683 43390 . + 0 ID=cds-WP_032237480.1;Parent=gene-AC57_RS08560;Dbxref=GenBank:WP_032237480.1;Name=WP_032237480.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417441.1;locus_tag=AC57_RS08560;product=DUF554 domain-containing protein;protein_id=WP_032237480.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 43496 43571 . + . ID=gene-AC57_RS08555;Name=AC57_RS08555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS08555;old_locus_tag=AC57_3248 NZ_JJLR01000112.1 tRNAscan-SE tRNA 43496 43571 . + . ID=rna-AC57_RS08555;Parent=gene-AC57_RS08555;anticodon=(pos:43529..43531);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS08555;product=tRNA-Phe NZ_JJLR01000112.1 tRNAscan-SE exon 43496 43571 . + . ID=exon-AC57_RS08555-1;Parent=rna-AC57_RS08555;anticodon=(pos:43529..43531);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS08555;product=tRNA-Phe NZ_JJLR01000112.1 RefSeq gene 43769 45034 . + . ID=gene-AC57_RS08550;Name=AC57_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08550;old_locus_tag=AC57_3249 NZ_JJLR01000112.1 Protein Homology CDS 43769 45034 . + 0 ID=cds-WP_032237479.1;Parent=gene-AC57_RS08550;Dbxref=GenBank:WP_032237479.1;Name=WP_032237479.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218764.1;locus_tag=AC57_RS08550;product=tyrosine-type recombinase/integrase;protein_id=WP_032237479.1;transl_table=11 NZ_JJLR01000112.1 RefSeq pseudogene 45357 46856 . - . ID=gene-AC57_RS0124830;Name=AC57_RS0124830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124830;pseudo=true NZ_JJLR01000112.1 Protein Homology CDS 45357 46856 . - 0 ID=cds-AC57_RS0124830;Parent=gene-AC57_RS0124830;Note=frameshifted;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001535067.1;locus_tag=AC57_RS0124830;product=phosphoethanolamine transferase;pseudo=true;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 47030 47560 . - . ID=gene-AC57_RS31140;Name=AC57_RS31140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31140;old_locus_tag=AC57_3254 NZ_JJLR01000112.1 Protein Homology CDS 47030 47560 . - 0 ID=cds-WP_089674132.1;Parent=gene-AC57_RS31140;Dbxref=GenBank:WP_089674132.1;Name=WP_089674132.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: protein motif:HMM:NF024895.6;locus_tag=AC57_RS31140;product=outer membrane protein;protein_id=WP_089674132.1;transl_table=11 NZ_JJLR01000112.1 RefSeq pseudogene 47862 48282 . - . ID=gene-AC57_RS27620;Name=AC57_RS27620;end_range=48282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27620;partial=true;pseudo=true NZ_JJLR01000112.1 Protein Homology CDS 47862 48282 . - 0 ID=cds-AC57_RS27620;Parent=gene-AC57_RS27620;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=48282,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AC57_RS27620;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 48504 49493 . - . ID=gene-AC57_RS08545;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AC57_RS08545;old_locus_tag=AC57_3256 NZ_JJLR01000112.1 Protein Homology CDS 48504 49493 . - 0 ID=cds-WP_032278757.1;Parent=gene-AC57_RS08545;Dbxref=GenBank:WP_032278757.1;Name=WP_032278757.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786430.1;locus_tag=AC57_RS08545;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_032278757.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 49515 50795 . - . ID=gene-AC57_RS08540;Name=AC57_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08540;old_locus_tag=AC57_3257 NZ_JJLR01000112.1 Protein Homology CDS 49515 50795 . - 0 ID=cds-WP_032267813.1;Parent=gene-AC57_RS08540;Dbxref=GenBank:WP_032267813.1;Name=WP_032267813.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229373.1;locus_tag=AC57_RS08540;product=MFS transporter;protein_id=WP_032267813.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 50866 51828 . - . ID=gene-AC57_RS08535;Name=AC57_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08535;old_locus_tag=AC57_3258 NZ_JJLR01000112.1 Protein Homology CDS 50866 51828 . - 0 ID=cds-WP_032237476.1;Parent=gene-AC57_RS08535;Dbxref=GenBank:WP_032237476.1;Name=WP_032237476.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003827390.1;locus_tag=AC57_RS08535;product=sugar kinase;protein_id=WP_032237476.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 51833 52582 . - . ID=gene-AC57_RS08530;Name=AC57_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08530;old_locus_tag=AC57_3259 NZ_JJLR01000112.1 Protein Homology CDS 51833 52582 . - 0 ID=cds-WP_032237475.1;Parent=gene-AC57_RS08530;Dbxref=GenBank:WP_032237475.1;Name=WP_032237475.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154912.1;locus_tag=AC57_RS08530;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_032237475.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 52682 53698 . - . ID=gene-AC57_RS08525;Name=AC57_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08525;old_locus_tag=AC57_3260 NZ_JJLR01000112.1 Protein Homology CDS 52682 53698 . - 0 ID=cds-WP_032237486.1;Parent=gene-AC57_RS08525;Dbxref=GenBank:WP_032237486.1;Name=WP_032237486.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455692.1;locus_tag=AC57_RS08525;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032237486.1;transl_table=11 NZ_JJLR01000112.1 RefSeq pseudogene 53719 54241 . - . ID=gene-AC57_RS30810;Name=AC57_RS30810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30810;partial=true;pseudo=true;start_range=.,53719 NZ_JJLR01000112.1 Protein Homology CDS 53719 54241 . - 0 ID=cds-AC57_RS30810;Parent=gene-AC57_RS30810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005017045.1;locus_tag=AC57_RS30810;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;start_range=.,53719;transl_table=11 NZ_JJLR01000112.1 RefSeq pseudogene 54211 54564 . - . ID=gene-AC57_RS0124850;Name=AC57_RS0124850;end_range=54564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124850;old_locus_tag=AC57_3261;partial=true;pseudo=true;start_range=.,54211 NZ_JJLR01000112.1 Protein Homology CDS 54211 54564 . - 0 ID=cds-AC57_RS0124850;Parent=gene-AC57_RS0124850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=54564,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS0124850;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,54211;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 54648 56156 . - . ID=gene-AC57_RS08520;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AC57_RS08520;old_locus_tag=AC57_3262 NZ_JJLR01000112.1 Protein Homology CDS 54648 56156 . - 0 ID=cds-WP_001189111.1-2;Parent=gene-AC57_RS08520;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS08520;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 NZ_JJLR01000112.1 RefSeq gene 56585 56770 . + . ID=gene-AC57_RS30815;Name=AC57_RS30815;end_range=56770,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30815;partial=true NZ_JJLR01000112.1 GeneMarkS-2+ CDS 56585 56770 . + 0 ID=cds-WP_282896365.1;Parent=gene-AC57_RS30815;Dbxref=GenBank:WP_282896365.1;Name=WP_282896365.1;end_range=56770,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30815;partial=true;product=hypothetical protein;protein_id=WP_282896365.1;transl_table=11 ##sequence-region NZ_JJLR01000113.1 1 18739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000113.1 RefSeq region 1 18739 . + . ID=NZ_JJLR01000113.1:1..18739;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000113.1 RefSeq gene 1 693 . + . ID=gene-AC57_RS0124860;Name=AC57_RS0124860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124860;old_locus_tag=AC57_3263;partial=true;start_range=.,1 NZ_JJLR01000113.1 Protein Homology CDS 1 245 . + 1 ID=cds-WP_249401512.1;Parent=gene-AC57_RS0124860;Dbxref=GenBank:WP_249401512.1;Name=WP_249401512.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS0124860;partial=true;product=IS1-like element IS1X2 family transposase;protein_id=WP_249401512.1;start_range=.,1;transl_table=11 NZ_JJLR01000113.1 Protein Homology CDS 245 693 . + 2 ID=cds-WP_249401512.1;Parent=gene-AC57_RS0124860;Dbxref=GenBank:WP_249401512.1;Name=WP_249401512.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS0124860;partial=true;product=IS1-like element IS1X2 family transposase;protein_id=WP_249401512.1;transl_table=11 NZ_JJLR01000113.1 RefSeq pseudogene 778 1072 . + . ID=gene-AC57_RS30820;Name=AC57_RS30820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30820;pseudo=true NZ_JJLR01000113.1 Protein Homology CDS 778 1072 . + 0 ID=cds-AC57_RS30820;Parent=gene-AC57_RS30820;Note=frameshifted%3B internal stop;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004132012.1;locus_tag=AC57_RS30820;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 1145 1312 . + . ID=gene-AC57_RS08515;Name=AC57_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08515;old_locus_tag=AC57_3264 NZ_JJLR01000113.1 Protein Homology CDS 1145 1312 . + 0 ID=cds-WP_162841962.1;Parent=gene-AC57_RS08515;Dbxref=GenBank:WP_162841962.1;Name=WP_162841962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312821.1;locus_tag=AC57_RS08515;product=transcriptional regulator;protein_id=WP_162841962.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 1433 2173 . + . ID=gene-AC57_RS08510;Name=AC57_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08510;old_locus_tag=AC57_3265 NZ_JJLR01000113.1 Protein Homology CDS 1433 2173 . + 0 ID=cds-WP_001066941.1;Parent=gene-AC57_RS08510;Dbxref=GenBank:WP_001066941.1;Name=WP_001066941.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052628.1;locus_tag=AC57_RS08510;product=tyrosine-type recombinase/integrase;protein_id=WP_001066941.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 2452 3429 . - . ID=gene-AC57_RS08505;Name=AC57_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08505;old_locus_tag=AC57_3267 NZ_JJLR01000113.1 Protein Homology CDS 2452 3429 . - 0 ID=cds-WP_000361612.1;Parent=gene-AC57_RS08505;Dbxref=GenBank:WP_000361612.1;Name=WP_000361612.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052630.2;locus_tag=AC57_RS08505;product=RepB family plasmid replication initiator protein;protein_id=WP_000361612.1;transl_table=11 NZ_JJLR01000113.1 RefSeq pseudogene 4073 4484 . - . ID=gene-AC57_RS27645;Name=AC57_RS27645;end_range=4484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27645;partial=true;pseudo=true NZ_JJLR01000113.1 Protein Homology CDS 4073 4484 . - 0 ID=cds-AC57_RS27645;Parent=gene-AC57_RS27645;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=4484,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=AC57_RS27645;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 4486 4773 . - . ID=gene-AC57_RS08500;Name=AC57_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08500;old_locus_tag=AC57_3270 NZ_JJLR01000113.1 Protein Homology CDS 4486 4773 . - 0 ID=cds-WP_001270421.1;Parent=gene-AC57_RS08500;Dbxref=GenBank:WP_001270421.1;Name=WP_001270421.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317119.1;locus_tag=AC57_RS08500;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_001270421.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 4770 5021 . - . ID=gene-AC57_RS08495;Name=AC57_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08495;old_locus_tag=AC57_3271 NZ_JJLR01000113.1 Protein Homology CDS 4770 5021 . - 0 ID=cds-WP_001132895.1;Parent=gene-AC57_RS08495;Dbxref=GenBank:WP_001132895.1;Name=WP_001132895.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001595120.1;locus_tag=AC57_RS08495;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_001132895.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 5195 5407 . - . ID=gene-AC57_RS08490;Name=AC57_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08490;old_locus_tag=AC57_3272 NZ_JJLR01000113.1 Protein Homology CDS 5195 5407 . - 0 ID=cds-WP_000402944.1;Parent=gene-AC57_RS08490;Dbxref=GenBank:WP_000402944.1;Name=WP_000402944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000402943.1;locus_tag=AC57_RS08490;product=hypothetical protein;protein_id=WP_000402944.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 5782 6987 . + . ID=gene-AC57_RS08485;Name=AC57_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08485;old_locus_tag=AC57_3273 NZ_JJLR01000113.1 Protein Homology CDS 5782 6987 . + 0 ID=cds-WP_000817642.1;Parent=gene-AC57_RS08485;Dbxref=GenBank:WP_000817642.1;Name=WP_000817642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817637.1;locus_tag=AC57_RS08485;product=AAA family ATPase;protein_id=WP_000817642.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 6984 7946 . + . ID=gene-AC57_RS08480;Name=AC57_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08480;old_locus_tag=AC57_3274 NZ_JJLR01000113.1 Protein Homology CDS 6984 7946 . + 0 ID=cds-WP_032200967.1;Parent=gene-AC57_RS08480;Dbxref=GenBank:WP_032200967.1;Name=WP_032200967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000756322.1;locus_tag=AC57_RS08480;product=ParB family protein;protein_id=WP_032200967.1;transl_table=11 NZ_JJLR01000113.1 RefSeq pseudogene 8087 8260 . - . ID=gene-AC57_RS27655;Name=AC57_RS27655;end_range=8260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27655;partial=true;pseudo=true NZ_JJLR01000113.1 Protein Homology CDS 8087 8260 . - 0 ID=cds-AC57_RS27655;Parent=gene-AC57_RS27655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457545.1;locus_tag=AC57_RS27655;partial=true;product=DUF4113 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 8334 8759 . + . ID=gene-AC57_RS08475;Name=AC57_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08475;old_locus_tag=AC57_3275 NZ_JJLR01000113.1 Protein Homology CDS 8334 8759 . + 0 ID=cds-WP_032200987.1;Parent=gene-AC57_RS08475;Dbxref=GenBank:WP_032200987.1;Name=WP_032200987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AC57_RS08475;product=antirestriction protein;protein_id=WP_032200987.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 8796 9965 . - . ID=gene-AC57_RS08470;Name=AC57_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08470;old_locus_tag=AC57_3276 NZ_JJLR01000113.1 Protein Homology CDS 8796 9965 . - 0 ID=cds-WP_032200968.1;Parent=gene-AC57_RS08470;Dbxref=GenBank:WP_032200968.1;Name=WP_032200968.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000942659.1;locus_tag=AC57_RS08470;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_032200968.1;transl_table=11 NZ_JJLR01000113.1 RefSeq pseudogene 10090 10543 . + . ID=gene-AC57_RS30825;Name=AC57_RS30825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30825;pseudo=true NZ_JJLR01000113.1 Protein Homology CDS 10090 10543 . + 0 ID=cds-AC57_RS30825;Parent=gene-AC57_RS30825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001188456.1;locus_tag=AC57_RS30825;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 10540 10731 . + . ID=gene-AC57_RS30335;Name=AC57_RS30335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30335;old_locus_tag=AC57_3279 NZ_JJLR01000113.1 Protein Homology CDS 10540 10731 . + 0 ID=cds-WP_032200969.1;Parent=gene-AC57_RS30335;Dbxref=GenBank:WP_032200969.1;Name=WP_032200969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AC57_RS30335;product=hypothetical protein;protein_id=WP_032200969.1;transl_table=11 NZ_JJLR01000113.1 RefSeq pseudogene 10710 11200 . - . ID=gene-AC57_RS31265;Name=AC57_RS31265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31265;pseudo=true NZ_JJLR01000113.1 Protein Homology CDS 10710 11200 . - 0 ID=cds-AC57_RS31265;Parent=gene-AC57_RS31265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311849.1;locus_tag=AC57_RS31265;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 11715 11945 . + . ID=gene-AC57_RS0124890;Name=AC57_RS0124890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124890 NZ_JJLR01000113.1 Protein Homology CDS 11715 11945 . + 0 ID=cds-WP_032200972.1;Parent=gene-AC57_RS0124890;Dbxref=GenBank:WP_032200972.1;Name=WP_032200972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AC57_RS0124890;product=hypothetical protein;protein_id=WP_032200972.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 11997 13358 . + . ID=gene-AC57_RS08460;Name=AC57_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08460;old_locus_tag=AC57_3283 NZ_JJLR01000113.1 Protein Homology CDS 11997 13358 . + 0 ID=cds-WP_032279984.1;Parent=gene-AC57_RS08460;Dbxref=GenBank:WP_032279984.1;Name=WP_032279984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AC57_RS08460;product=DUF3560 domain-containing protein;protein_id=WP_032279984.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 13405 13968 . + . ID=gene-AC57_RS08455;Name=AC57_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08455;old_locus_tag=AC57_3284 NZ_JJLR01000113.1 Protein Homology CDS 13405 13968 . + 0 ID=cds-WP_032200974.1;Parent=gene-AC57_RS08455;Dbxref=GenBank:WP_032200974.1;Name=WP_032200974.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AC57_RS08455;product=methyltransferase;protein_id=WP_032200974.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 14054 14533 . - . ID=gene-AC57_RS26230;Name=AC57_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26230;old_locus_tag=AC57_3285 NZ_JJLR01000113.1 Protein Homology CDS 14054 14533 . - 0 ID=cds-WP_064735158.1;Parent=gene-AC57_RS26230;Dbxref=GenBank:WP_064735158.1;Name=WP_064735158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011478091.1;locus_tag=AC57_RS26230;product=hypothetical protein;protein_id=WP_064735158.1;transl_table=11 NZ_JJLR01000113.1 RefSeq pseudogene 14535 14821 . + . ID=gene-AC57_RS0124900;Name=AC57_RS0124900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124900;pseudo=true NZ_JJLR01000113.1 Protein Homology CDS 14535 14821 . + 0 ID=cds-AC57_RS0124900;Parent=gene-AC57_RS0124900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=AC57_RS0124900;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 14939 15760 . + . ID=gene-AC57_RS08450;Name=AC57_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08450;old_locus_tag=AC57_3286 NZ_JJLR01000113.1 Protein Homology CDS 14939 15760 . + 0 ID=cds-WP_032279986.1;Parent=gene-AC57_RS08450;Dbxref=GenBank:WP_032279986.1;Name=WP_032279986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AC57_RS08450;product=DUF932 domain-containing protein;protein_id=WP_032279986.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 16056 16646 . - . ID=gene-AC57_RS08445;Name=AC57_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08445;old_locus_tag=AC57_3287 NZ_JJLR01000113.1 Protein Homology CDS 16056 16646 . - 0 ID=cds-WP_282916126.1;Parent=gene-AC57_RS08445;Dbxref=GenBank:WP_282916126.1;Name=WP_282916126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020246007.1;locus_tag=AC57_RS08445;product=transglycosylase SLT domain-containing protein;protein_id=WP_282916126.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 16979 17362 . + . ID=gene-AC57_RS08440;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AC57_RS08440;old_locus_tag=AC57_3288 NZ_JJLR01000113.1 Protein Homology CDS 16979 17362 . + 0 ID=cds-WP_001151524.1;Parent=gene-AC57_RS08440;Dbxref=GenBank:WP_001151524.1;Name=WP_001151524.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151541.1;locus_tag=AC57_RS08440;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001151524.1;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 17549 18238 . + . ID=gene-AC57_RS08435;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=AC57_RS08435;old_locus_tag=AC57_3289 NZ_JJLR01000113.1 Protein Homology CDS 17549 18238 . + 0 ID=cds-WP_000283384.1;Parent=gene-AC57_RS08435;Dbxref=GenBank:WP_000283384.1;Name=WP_000283384.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003979562.1;locus_tag=AC57_RS08435;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_000283384.1;transl_table=11 NZ_JJLR01000113.1 RefSeq pseudogene 18337 18474 . + . ID=gene-AC57_RS0124905;Name=AC57_RS0124905;end_range=18474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124905;partial=true;pseudo=true NZ_JJLR01000113.1 Protein Homology CDS 18337 18474 . + 0 ID=cds-AC57_RS0124905;Parent=gene-AC57_RS0124905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;end_range=18474,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366159.1;locus_tag=AC57_RS0124905;partial=true;product=TraY domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000113.1 RefSeq gene 18491 18739 . - . ID=gene-AC57_RS08430;Name=AC57_RS08430;end_range=18739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08430;old_locus_tag=AC57_3290;partial=true NZ_JJLR01000113.1 Protein Homology CDS 18491 18739 . - 0 ID=cds-WP_000674744.1-8;Parent=gene-AC57_RS08430;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=18739,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS08430;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;transl_table=11 ##sequence-region NZ_JJLR01000114.1 1 62476 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000114.1 RefSeq region 1 62476 . + . ID=NZ_JJLR01000114.1:1..62476;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000114.1 RefSeq gene 1 230 . - . ID=gene-AC57_RS0124910;Name=AC57_RS0124910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124910;old_locus_tag=AC57_3291;partial=true;start_range=.,1 NZ_JJLR01000114.1 Protein Homology CDS 1 230 . - 0 ID=cds-WP_001397795.1-3;Parent=gene-AC57_RS0124910;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0124910;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;start_range=.,1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 289 1977 . + . ID=gene-AC57_RS08425;Name=AC57_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08425;old_locus_tag=AC57_3292 NZ_JJLR01000114.1 Protein Homology CDS 289 1977 . + 0 ID=cds-WP_001469744.1;Parent=gene-AC57_RS08425;Dbxref=GenBank:WP_001469744.1;Name=WP_001469744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708792.2;locus_tag=AC57_RS08425;product=fatty acyl-AMP ligase;protein_id=WP_001469744.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 1974 2888 . + . ID=gene-AC57_RS08420;Name=AC57_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08420;old_locus_tag=AC57_3293 NZ_JJLR01000114.1 Protein Homology CDS 1974 2888 . + 0 ID=cds-WP_032279645.1;Parent=gene-AC57_RS08420;Dbxref=GenBank:WP_032279645.1;Name=WP_032279645.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481799.1;locus_tag=AC57_RS08420;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_032279645.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 2920 3168 . + . ID=gene-AC57_RS08415;Name=AC57_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08415;old_locus_tag=AC57_3294 NZ_JJLR01000114.1 Protein Homology CDS 2920 3168 . + 0 ID=cds-WP_000248097.1;Parent=gene-AC57_RS08415;Dbxref=GenBank:WP_000248097.1;Name=WP_000248097.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708794.1;locus_tag=AC57_RS08415;product=acyl carrier protein;protein_id=WP_000248097.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 3168 4340 . + . ID=gene-AC57_RS08410;Name=spt;gbkey=Gene;gene=spt;gene_biotype=protein_coding;locus_tag=AC57_RS08410;old_locus_tag=AC57_3295 NZ_JJLR01000114.1 Protein Homology CDS 3168 4340 . + 0 ID=cds-WP_032237494.1;Parent=gene-AC57_RS08410;Dbxref=GenBank:WP_032237494.1;Name=WP_032237494.1;Ontology_term=GO:0046513,GO:0004758,GO:0030170;gbkey=CDS;gene=spt;go_function=serine C-palmitoyltransferase activity|0004758||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=ceramide biosynthetic process|0046513||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239167.1;locus_tag=AC57_RS08410;product=serine palmitoyltransferase;protein_id=WP_032237494.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 4375 5454 . - . ID=gene-AC57_RS08405;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AC57_RS08405;old_locus_tag=AC57_3296 NZ_JJLR01000114.1 Protein Homology CDS 4375 5454 . - 0 ID=cds-WP_001318997.1;Parent=gene-AC57_RS08405;Dbxref=GenBank:WP_001318997.1;Name=WP_001318997.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708797.1;locus_tag=AC57_RS08405;product=LPS export ABC transporter permease LptG;protein_id=WP_001318997.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 5451 6521 . - . ID=gene-AC57_RS08400;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AC57_RS08400;old_locus_tag=AC57_3297 NZ_JJLR01000114.1 Protein Homology CDS 5451 6521 . - 0 ID=cds-WP_000779648.1;Parent=gene-AC57_RS08400;Dbxref=GenBank:WP_000779648.1;Name=WP_000779648.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708798.1;locus_tag=AC57_RS08400;product=LPS export ABC transporter permease LptF;protein_id=WP_000779648.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 6552 7112 . - . ID=gene-AC57_RS08395;Name=AC57_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08395;old_locus_tag=AC57_3298 NZ_JJLR01000114.1 Protein Homology CDS 6552 7112 . - 0 ID=cds-WP_000098710.1;Parent=gene-AC57_RS08395;Dbxref=GenBank:WP_000098710.1;Name=WP_000098710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708799.2;locus_tag=AC57_RS08395;product=YtfJ family protein;protein_id=WP_000098710.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 7124 7948 . - . ID=gene-AC57_RS08390;Name=AC57_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08390;old_locus_tag=AC57_3299 NZ_JJLR01000114.1 Protein Homology CDS 7124 7948 . - 0 ID=cds-WP_000984978.1;Parent=gene-AC57_RS08390;Dbxref=GenBank:WP_000984978.1;Name=WP_000984978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708800.1;locus_tag=AC57_RS08390;product=hypothetical protein;protein_id=WP_000984978.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 7948 9297 . - . ID=gene-AC57_RS08385;Name=AC57_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08385;old_locus_tag=AC57_3300 NZ_JJLR01000114.1 Protein Homology CDS 7948 9297 . - 0 ID=cds-WP_032237492.1;Parent=gene-AC57_RS08385;Dbxref=GenBank:WP_032237492.1;Name=WP_032237492.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708801.1;locus_tag=AC57_RS08385;product=lipopolysaccharide biosynthesis protein;protein_id=WP_032237492.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 9343 10101 . - . ID=gene-AC57_RS08380;Name=AC57_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08380;old_locus_tag=AC57_3301 NZ_JJLR01000114.1 Protein Homology CDS 9343 10101 . - 0 ID=cds-WP_000339531.1;Parent=gene-AC57_RS08380;Dbxref=GenBank:WP_000339531.1;Name=WP_000339531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417458.1;locus_tag=AC57_RS08380;product=ATP-binding protein;protein_id=WP_000339531.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 10133 10846 . - . ID=gene-AC57_RS08375;Name=AC57_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08375;old_locus_tag=AC57_3302 NZ_JJLR01000114.1 Protein Homology CDS 10133 10846 . - 0 ID=cds-WP_024168074.1;Parent=gene-AC57_RS08375;Dbxref=GenBank:WP_024168074.1;Name=WP_024168074.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417459.1;locus_tag=AC57_RS08375;product=dTMP kinase;protein_id=WP_024168074.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 11020 11712 . + . ID=gene-AC57_RS08370;Name=AC57_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08370;old_locus_tag=AC57_3303 NZ_JJLR01000114.1 Protein Homology CDS 11020 11712 . + 0 ID=cds-WP_001190781.1;Parent=gene-AC57_RS08370;Dbxref=GenBank:WP_001190781.1;Name=WP_001190781.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=AC57_RS08370;product=dTMP kinase;protein_id=WP_001190781.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 11761 13260 . - . ID=gene-AC57_RS08365;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AC57_RS08365;old_locus_tag=AC57_3304 NZ_JJLR01000114.1 Protein Homology CDS 11761 13260 . - 0 ID=cds-WP_000933250.1;Parent=gene-AC57_RS08365;Dbxref=GenBank:WP_000933250.1;Name=WP_000933250.1;gbkey=CDS;gene=pitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=AC57_RS08365;product=inorganic phosphate transporter PitB;protein_id=WP_000933250.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 13552 15411 . - . ID=gene-AC57_RS08360;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AC57_RS08360;old_locus_tag=AC57_3306 NZ_JJLR01000114.1 Protein Homology CDS 13552 15411 . - 0 ID=cds-WP_001297309.1;Parent=gene-AC57_RS08360;Dbxref=GenBank:WP_001297309.1;Name=WP_001297309.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417462.1;locus_tag=AC57_RS08360;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001297309.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 15616 16482 . + . ID=gene-AC57_RS08355;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AC57_RS08355;old_locus_tag=AC57_3307 NZ_JJLR01000114.1 Protein Homology CDS 15616 16482 . + 0 ID=cds-WP_001295515.1;Parent=gene-AC57_RS08355;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AC57_RS08355;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 16605 16853 . - . ID=gene-AC57_RS08350;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AC57_RS08350;old_locus_tag=AC57_3308 NZ_JJLR01000114.1 Protein Homology CDS 16605 16853 . - 0 ID=cds-WP_000334896.1;Parent=gene-AC57_RS08350;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AC57_RS08350;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 16866 17207 . - . ID=gene-AC57_RS08345;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AC57_RS08345;old_locus_tag=AC57_3309 NZ_JJLR01000114.1 Protein Homology CDS 16866 17207 . - 0 ID=cds-WP_000544953.1;Parent=gene-AC57_RS08345;Dbxref=GenBank:WP_000544953.1;Name=WP_000544953.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AC57_RS08345;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544953.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 17200 17688 . - . ID=gene-AC57_RS08340;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AC57_RS08340;old_locus_tag=AC57_3310 NZ_JJLR01000114.1 Protein Homology CDS 17200 17688 . - 0 ID=cds-WP_000134014.1;Parent=gene-AC57_RS08340;Dbxref=GenBank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AC57_RS08340;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 17681 18175 . - . ID=gene-AC57_RS08335;Name=AC57_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08335;old_locus_tag=AC57_3311 NZ_JJLR01000114.1 Protein Homology CDS 17681 18175 . - 0 ID=cds-WP_001221939.1;Parent=gene-AC57_RS08335;Dbxref=GenBank:WP_001221939.1;Name=WP_001221939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417467.1;locus_tag=AC57_RS08335;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221939.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 18175 19878 . - . ID=gene-AC57_RS08330;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AC57_RS08330;old_locus_tag=AC57_3312 NZ_JJLR01000114.1 Protein Homology CDS 18175 19878 . - 0 ID=cds-WP_000083065.1;Parent=gene-AC57_RS08330;Dbxref=GenBank:WP_000083065.1;Name=WP_000083065.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AC57_RS08330;product=hydrogenase 2 large subunit;protein_id=WP_000083065.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 19875 21053 . - . ID=gene-AC57_RS08325;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AC57_RS08325;old_locus_tag=AC57_3313 NZ_JJLR01000114.1 Protein Homology CDS 19875 21053 . - 0 ID=cds-WP_000017703.1;Parent=gene-AC57_RS08325;Dbxref=GenBank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AC57_RS08325;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 21043 22029 . - . ID=gene-AC57_RS08320;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AC57_RS08320;old_locus_tag=AC57_3314 NZ_JJLR01000114.1 Protein Homology CDS 21043 22029 . - 0 ID=cds-WP_001081870.1;Parent=gene-AC57_RS08320;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AC57_RS08320;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 22032 23150 . - . ID=gene-AC57_RS08315;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AC57_RS08315;old_locus_tag=AC57_3315 NZ_JJLR01000114.1 Protein Homology CDS 22032 23150 . - 0 ID=cds-WP_000145410.1;Parent=gene-AC57_RS08315;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AC57_RS08315;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 23339 23626 . - . ID=gene-AC57_RS08310;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AC57_RS08310;old_locus_tag=AC57_3317 NZ_JJLR01000114.1 Protein Homology CDS 23339 23626 . - 0 ID=cds-WP_001059136.1;Parent=gene-AC57_RS08310;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AC57_RS08310;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11 NZ_JJLR01000114.1 RefSeq pseudogene 23745 24629 . - . ID=gene-AC57_RS0124920;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=pseudogene;locus_tag=AC57_RS0124920;pseudo=true NZ_JJLR01000114.1 Protein Homology CDS 23745 24629 . - 0 ID=cds-AC57_RS0124920;Parent=gene-AC57_RS0124920;Note=frameshifted;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AC57_RS0124920;product=YghX family hydrolase;pseudo=true;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 24786 25826 . + . ID=gene-AC57_RS08305;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AC57_RS08305;old_locus_tag=AC57_3321 NZ_JJLR01000114.1 Protein Homology CDS 24786 25826 . + 0 ID=cds-WP_000262172.1;Parent=gene-AC57_RS08305;Dbxref=GenBank:WP_000262172.1;Name=WP_000262172.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417474.1;locus_tag=AC57_RS08305;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262172.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 25866 26360 . - . ID=gene-AC57_RS08300;Name=AC57_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08300;old_locus_tag=AC57_3322 NZ_JJLR01000114.1 Protein Homology CDS 25866 26360 . - 0 ID=cds-WP_000439331.1;Parent=gene-AC57_RS08300;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AC57_RS08300;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 26551 27435 . + . ID=gene-AC57_RS08295;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AC57_RS08295;old_locus_tag=AC57_3323 NZ_JJLR01000114.1 Protein Homology CDS 26551 27435 . + 0 ID=cds-WP_000018760.1;Parent=gene-AC57_RS08295;Dbxref=GenBank:WP_000018760.1;Name=WP_000018760.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AC57_RS08295;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018760.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 27707 28132 . - . ID=gene-AC57_RS08290;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AC57_RS08290;old_locus_tag=AC57_3324 NZ_JJLR01000114.1 Protein Homology CDS 27707 28132 . - 0 ID=cds-WP_001240712.1;Parent=gene-AC57_RS08290;Dbxref=GenBank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AC57_RS08290;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 28139 28873 . - . ID=gene-AC57_RS08285;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AC57_RS08285;old_locus_tag=AC57_3325 NZ_JJLR01000114.1 Protein Homology CDS 28139 28873 . - 0 ID=cds-WP_000527844.1;Parent=gene-AC57_RS08285;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AC57_RS08285;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 29125 30312 . + . ID=gene-AC57_RS08280;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AC57_RS08280;old_locus_tag=AC57_3326 NZ_JJLR01000114.1 Protein Homology CDS 29125 30312 . + 0 ID=cds-WP_001301079.1;Parent=gene-AC57_RS08280;Dbxref=GenBank:WP_001301079.1;Name=WP_001301079.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417481.1;locus_tag=AC57_RS08280;product=cystathionine beta-lyase;protein_id=WP_001301079.1;transl_table=11 NZ_JJLR01000114.1 RefSeq pseudogene 30452 31112 . + . ID=gene-AC57_RS08275;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=pseudogene;locus_tag=AC57_RS08275;old_locus_tag=AC57_3327;pseudo=true NZ_JJLR01000114.1 Protein Homology CDS 30452 31112 . + 0 ID=cds-AC57_RS08275;Parent=gene-AC57_RS08275;Note=frameshifted;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AC57_RS08275;product=DedA family general envelope maintenance protein YghB;pseudo=true;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 31152 32051 . - . ID=gene-AC57_RS08270;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AC57_RS08270;old_locus_tag=AC57_3328 NZ_JJLR01000114.1 Protein Homology CDS 31152 32051 . - 0 ID=cds-WP_001298382.1;Parent=gene-AC57_RS08270;Dbxref=GenBank:WP_001298382.1;Name=WP_001298382.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AC57_RS08270;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_001298382.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 32245 33408 . + . ID=gene-AC57_RS08260;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AC57_RS08260;old_locus_tag=AC57_3330 NZ_JJLR01000114.1 Protein Homology CDS 32245 33408 . + 0 ID=cds-WP_001058802.1;Parent=gene-AC57_RS08260;Dbxref=GenBank:WP_001058802.1;Name=WP_001058802.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AC57_RS08260;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 33513 34340 . + . ID=gene-AC57_RS08255;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AC57_RS08255;old_locus_tag=AC57_3331 NZ_JJLR01000114.1 Protein Homology CDS 33513 34340 . + 0 ID=cds-WP_000013149.1;Parent=gene-AC57_RS08255;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AC57_RS08255;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 34540 35466 . + . ID=gene-AC57_RS08250;Name=AC57_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08250;old_locus_tag=AC57_3333 NZ_JJLR01000114.1 Protein Homology CDS 34540 35466 . + 0 ID=cds-WP_000691619.1;Parent=gene-AC57_RS08250;Dbxref=GenBank:WP_000691619.1;Name=WP_000691619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AC57_RS08250;product=YbjP/YqhG family protein;protein_id=WP_000691619.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 35517 35774 . + . ID=gene-AC57_RS08245;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AC57_RS08245;old_locus_tag=AC57_3334 NZ_JJLR01000114.1 Protein Homology CDS 35517 35774 . + 0 ID=cds-WP_000848528.1;Parent=gene-AC57_RS08245;Dbxref=GenBank:WP_000848528.1;Name=WP_000848528.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AC57_RS08245;product=lipoprotein YqhH;protein_id=WP_000848528.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 35817 38036 . - . ID=gene-AC57_RS08240;Name=AC57_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08240;old_locus_tag=AC57_3335 NZ_JJLR01000114.1 Protein Homology CDS 35817 38036 . - 0 ID=cds-WP_000095187.1;Parent=gene-AC57_RS08240;Dbxref=GenBank:WP_000095187.1;Name=WP_000095187.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AC57_RS08240;product=YgiQ family radical SAM protein;protein_id=WP_000095187.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 38147 39559 . - . ID=gene-AC57_RS08235;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AC57_RS08235;old_locus_tag=AC57_3336 NZ_JJLR01000114.1 Protein Homology CDS 38147 39559 . - 0 ID=cds-WP_000059388.1;Parent=gene-AC57_RS08235;Dbxref=GenBank:WP_000059388.1;Name=WP_000059388.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417489.1;locus_tag=AC57_RS08235;product=cell division protein FtsP;protein_id=WP_000059388.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 39634 40371 . - . ID=gene-AC57_RS08230;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AC57_RS08230;old_locus_tag=AC57_3337 NZ_JJLR01000114.1 Protein Homology CDS 39634 40371 . - 0 ID=cds-WP_000965722.1;Parent=gene-AC57_RS08230;Dbxref=GenBank:WP_000965722.1;Name=WP_000965722.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417490.1;locus_tag=AC57_RS08230;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965722.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 40605 42863 . - . ID=gene-AC57_RS08225;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AC57_RS08225;old_locus_tag=AC57_3338 NZ_JJLR01000114.1 Protein Homology CDS 40605 42863 . - 0 ID=cds-WP_001281881.1;Parent=gene-AC57_RS08225;Dbxref=GenBank:WP_001281881.1;Name=WP_001281881.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AC57_RS08225;product=DNA topoisomerase IV subunit A;protein_id=WP_001281881.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 43001 44608 . - . ID=gene-AC57_RS08220;Name=AC57_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08220;old_locus_tag=AC57_3339 NZ_JJLR01000114.1 Protein Homology CDS 43001 44608 . - 0 ID=cds-WP_001295629.1;Parent=gene-AC57_RS08220;Dbxref=GenBank:WP_001295629.1;Name=WP_001295629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AC57_RS08220;product=ABC transporter substrate-binding protein;protein_id=WP_001295629.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 44741 45136 . - . ID=gene-AC57_RS08215;Name=mqsA;gbkey=Gene;gene=mqsA;gene_biotype=protein_coding;locus_tag=AC57_RS08215;old_locus_tag=AC57_3340 NZ_JJLR01000114.1 Protein Homology CDS 44741 45136 . - 0 ID=cds-WP_000650107.1;Parent=gene-AC57_RS08215;Dbxref=GenBank:WP_000650107.1;Name=WP_000650107.1;gbkey=CDS;gene=mqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417493.1;locus_tag=AC57_RS08215;product=type II toxin-antitoxin system antitoxin MqsA;protein_id=WP_000650107.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 45138 45434 . - . ID=gene-AC57_RS0124930;Name=mqsR;gbkey=Gene;gene=mqsR;gene_biotype=protein_coding;locus_tag=AC57_RS0124930 NZ_JJLR01000114.1 Protein Homology CDS 45138 45434 . - 0 ID=cds-WP_000415584.1;Parent=gene-AC57_RS0124930;Dbxref=GenBank:WP_000415584.1;Name=WP_000415584.1;gbkey=CDS;gene=mqsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417494.1;locus_tag=AC57_RS0124930;product=type II toxin-antitoxin system toxin MqsR;protein_id=WP_000415584.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 45639 46121 . - . ID=gene-AC57_RS08210;Name=AC57_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08210;old_locus_tag=AC57_3341 NZ_JJLR01000114.1 Protein Homology CDS 45639 46121 . - 0 ID=cds-WP_000183505.1;Parent=gene-AC57_RS08210;Dbxref=GenBank:WP_000183505.1;Name=WP_000183505.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026197.1;locus_tag=AC57_RS08210;product=AraC family transcriptional regulator;protein_id=WP_000183505.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 46174 46566 . - . ID=gene-AC57_RS08205;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AC57_RS08205;old_locus_tag=AC57_3342 NZ_JJLR01000114.1 Protein Homology CDS 46174 46566 . - 0 ID=cds-WP_000712658.1;Parent=gene-AC57_RS08205;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AC57_RS08205;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 46718 47377 . + . ID=gene-AC57_RS08200;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AC57_RS08200;old_locus_tag=AC57_3343 NZ_JJLR01000114.1 Protein Homology CDS 46718 47377 . + 0 ID=cds-WP_001221493.1;Parent=gene-AC57_RS08200;Dbxref=GenBank:WP_001221493.1;Name=WP_001221493.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AC57_RS08200;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_001221493.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 47374 48723 . + . ID=gene-AC57_RS08195;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AC57_RS08195;old_locus_tag=AC57_3344 NZ_JJLR01000114.1 Protein Homology CDS 47374 48723 . + 0 ID=cds-WP_000673402.1;Parent=gene-AC57_RS08195;Dbxref=GenBank:WP_000673402.1;Name=WP_000673402.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AC57_RS08195;product=quorum sensing histidine kinase QseC;protein_id=WP_000673402.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 48769 49101 . - . ID=gene-AC57_RS0124935;Name=AC57_RS0124935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124935 NZ_JJLR01000114.1 Protein Homology CDS 48769 49101 . - 0 ID=cds-WP_000917684.1;Parent=gene-AC57_RS0124935;Dbxref=GenBank:WP_000917684.1;Name=WP_000917684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417499.1;locus_tag=AC57_RS0124935;product=DUF2645 family protein;protein_id=WP_000917684.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 49420 50001 . + . ID=gene-AC57_RS08190;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AC57_RS08190;old_locus_tag=AC57_3346 NZ_JJLR01000114.1 Protein Homology CDS 49420 50001 . + 0 ID=cds-WP_000065430.1;Parent=gene-AC57_RS08190;Dbxref=GenBank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AC57_RS08190;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 50032 50346 . + . ID=gene-AC57_RS08185;Name=AC57_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08185;old_locus_tag=AC57_3347 NZ_JJLR01000114.1 Protein Homology CDS 50032 50346 . + 0 ID=cds-WP_000958598.1;Parent=gene-AC57_RS08185;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AC57_RS08185;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 50394 52286 . - . ID=gene-AC57_RS08180;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AC57_RS08180;old_locus_tag=AC57_3348 NZ_JJLR01000114.1 Protein Homology CDS 50394 52286 . - 0 ID=cds-WP_000195296.1;Parent=gene-AC57_RS08180;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AC57_RS08180;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 52315 52896 . - . ID=gene-AC57_RS08175;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AC57_RS08175;old_locus_tag=AC57_3349 NZ_JJLR01000114.1 Protein Homology CDS 52315 52896 . - 0 ID=cds-WP_000105733.1;Parent=gene-AC57_RS08175;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AC57_RS08175;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 52896 53723 . - . ID=gene-AC57_RS08170;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AC57_RS08170;old_locus_tag=AC57_3350 NZ_JJLR01000114.1 Protein Homology CDS 52896 53723 . - 0 ID=cds-WP_000444752.1;Parent=gene-AC57_RS08170;Dbxref=GenBank:WP_000444752.1;Name=WP_000444752.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AC57_RS08170;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444752.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 53748 54170 . - . ID=gene-AC57_RS08165;Name=AC57_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08165;old_locus_tag=AC57_3351 NZ_JJLR01000114.1 Protein Homology CDS 53748 54170 . - 0 ID=cds-WP_000833393.1;Parent=gene-AC57_RS08165;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AC57_RS08165;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 54171 54800 . - . ID=gene-AC57_RS08160;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AC57_RS08160;old_locus_tag=AC57_3352 NZ_JJLR01000114.1 Protein Homology CDS 54171 54800 . - 0 ID=cds-WP_000917138.1;Parent=gene-AC57_RS08160;Dbxref=GenBank:WP_000917138.1;Name=WP_000917138.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AC57_RS08160;product=ADP-ribose diphosphatase;protein_id=WP_000917138.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 55005 56486 . + . ID=gene-AC57_RS08155;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AC57_RS08155;old_locus_tag=AC57_3353 NZ_JJLR01000114.1 Protein Homology CDS 55005 56486 . + 0 ID=cds-WP_000735278.1;Parent=gene-AC57_RS08155;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AC57_RS08155;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 56634 57305 . + . ID=gene-AC57_RS08150;Name=AC57_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08150;old_locus_tag=AC57_3354 NZ_JJLR01000114.1 Protein Homology CDS 56634 57305 . + 0 ID=cds-WP_000831543.1;Parent=gene-AC57_RS08150;Dbxref=GenBank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AC57_RS08150;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 57311 58471 . + . ID=gene-AC57_RS08145;Name=AC57_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08145;old_locus_tag=AC57_3355 NZ_JJLR01000114.1 Protein Homology CDS 57311 58471 . + 0 ID=cds-WP_001723912.1;Parent=gene-AC57_RS08145;Dbxref=GenBank:WP_001723912.1;Name=WP_001723912.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AC57_RS08145;product=glutathionylspermidine synthase family protein;protein_id=WP_001723912.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 58509 59297 . - . ID=gene-AC57_RS08140;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AC57_RS08140;old_locus_tag=AC57_3356 NZ_JJLR01000114.1 Protein Homology CDS 58509 59297 . - 0 ID=cds-WP_032246264.1;Parent=gene-AC57_RS08140;Dbxref=GenBank:WP_032246264.1;Name=WP_032246264.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AC57_RS08140;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_032246264.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 59440 60213 . + . ID=gene-AC57_RS08135;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AC57_RS08135;old_locus_tag=AC57_3357 NZ_JJLR01000114.1 Protein Homology CDS 59440 60213 . + 0 ID=cds-WP_001295627.1;Parent=gene-AC57_RS08135;Dbxref=GenBank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AC57_RS08135;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 60271 60441 . - . ID=gene-AC57_RS30340;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AC57_RS30340;old_locus_tag=AC57_3358 NZ_JJLR01000114.1 Protein Homology CDS 60271 60441 . - 0 ID=cds-WP_000469266.1;Parent=gene-AC57_RS30340;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AC57_RS30340;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11 NZ_JJLR01000114.1 RefSeq gene 60703 61356 . - . ID=gene-AC57_RS08125;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AC57_RS08125;old_locus_tag=AC57_3359 NZ_JJLR01000114.1 Protein Homology CDS 60703 61356 . - 0 ID=cds-WP_001076997.1;Parent=gene-AC57_RS08125;Dbxref=GenBank:WP_001076997.1;Name=WP_001076997.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AC57_RS08125;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11 NZ_JJLR01000114.1 cmsearch riboswitch 61461 61609 . - . ID=id-NZ_JJLR01000114.1:61461..61609;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLR01000114.1 RefSeq gene 61731 62021 . + . ID=gene-AC57_RS08120;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AC57_RS08120;old_locus_tag=AC57_3360 NZ_JJLR01000114.1 Protein Homology CDS 61731 62021 . + 0 ID=cds-WP_001295626.1;Parent=gene-AC57_RS08120;Dbxref=GenBank:WP_001295626.1;Name=WP_001295626.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417514.4;locus_tag=AC57_RS08120;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001295626.1;transl_table=11 NZ_JJLR01000114.1 RefSeq pseudogene 62151 62476 . + . ID=gene-AC57_RS0124945;Name=AC57_RS0124945;end_range=62476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124945;partial=true;pseudo=true NZ_JJLR01000114.1 Protein Homology CDS 62151 62476 . + 0 ID=cds-AC57_RS0124945;Parent=gene-AC57_RS0124945;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=62476,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0124945;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000115.1 1 4528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000115.1 RefSeq region 1 4528 . + . ID=NZ_JJLR01000115.1:1..4528;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000115.1 RefSeq pseudogene 1 295 . + . ID=gene-AC57_RS08115;Name=AC57_RS08115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS08115;old_locus_tag=AC57_3362;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000115.1 Protein Homology CDS 1 295 . + 1 ID=cds-AC57_RS08115;Parent=gene-AC57_RS08115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS08115;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000115.1 RefSeq pseudogene 302 745 . + . ID=gene-AC57_RS26075;Name=AC57_RS26075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26075;old_locus_tag=AC57_3363;partial=true;pseudo=true;start_range=.,302 NZ_JJLR01000115.1 Protein Homology CDS 302 745 . + 0 ID=cds-AC57_RS26075;Parent=gene-AC57_RS26075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417515.1;locus_tag=AC57_RS26075;partial=true;product=fimbrial-like protein;pseudo=true;start_range=.,302;transl_table=11 NZ_JJLR01000115.1 RefSeq gene 805 3309 . + . ID=gene-AC57_RS08110;Name=AC57_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08110;old_locus_tag=AC57_3364 NZ_JJLR01000115.1 Protein Homology CDS 805 3309 . + 0 ID=cds-WP_032280112.1;Parent=gene-AC57_RS08110;Dbxref=GenBank:WP_032280112.1;Name=WP_032280112.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480735.1;locus_tag=AC57_RS08110;product=fimbria/pilus outer membrane usher protein;protein_id=WP_032280112.1;transl_table=11 NZ_JJLR01000115.1 RefSeq gene 3325 4074 . + . ID=gene-AC57_RS08105;Name=yqiH;gbkey=Gene;gene=yqiH;gene_biotype=protein_coding;locus_tag=AC57_RS08105;old_locus_tag=AC57_3365 NZ_JJLR01000115.1 Protein Homology CDS 3325 4074 . + 0 ID=cds-WP_032237330.1;Parent=gene-AC57_RS08105;Dbxref=GenBank:WP_032237330.1;Name=WP_032237330.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yqiH;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417519.4;locus_tag=AC57_RS08105;product=fimbrial biogenesis chaperone;protein_id=WP_032237330.1;transl_table=11 NZ_JJLR01000115.1 RefSeq pseudogene 4076 4279 . + . ID=gene-AC57_RS08100;Name=AC57_RS08100;end_range=4279,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS08100;old_locus_tag=AC57_3366;partial=true;pseudo=true NZ_JJLR01000115.1 Protein Homology CDS 4076 4279 . + 0 ID=cds-AC57_RS08100;Parent=gene-AC57_RS08100;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417520.1;locus_tag=AC57_RS08100;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000115.1 RefSeq gene 4296 4528 . - . ID=gene-AC57_RS08095;Name=AC57_RS08095;end_range=4528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS08095;old_locus_tag=AC57_3367;partial=true NZ_JJLR01000115.1 Protein Homology CDS 4296 4528 . - 2 ID=cds-WP_005134386.1-2;Parent=gene-AC57_RS08095;Dbxref=GenBank:WP_005134386.1;Name=WP_005134386.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4528,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS08095;partial=true;product=IS1 family transposase;protein_id=WP_005134386.1;transl_table=11 ##sequence-region NZ_JJLR01000116.1 1 4561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000116.1 RefSeq region 1 4561 . + . ID=NZ_JJLR01000116.1:1..4561;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000116.1 RefSeq gene 1 209 . - . ID=gene-AC57_RS0124955;Name=AC57_RS0124955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124955;old_locus_tag=AC57_3368;partial=true;start_range=.,1 NZ_JJLR01000116.1 Protein Homology CDS 1 209 . - 0 ID=cds-WP_001408908.1;Parent=gene-AC57_RS0124955;Dbxref=GenBank:WP_001408908.1;Name=WP_001408908.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF048018.1;locus_tag=AC57_RS0124955;partial=true;product=IS1 family transposase;protein_id=WP_001408908.1;start_range=.,1;transl_table=11 NZ_JJLR01000116.1 RefSeq gene 242 1132 . + . ID=gene-AC57_RS0124960;Name=AC57_RS0124960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0124960;old_locus_tag=AC57_3369 NZ_JJLR01000116.1 Protein Homology CDS 242 1132 . + 0 ID=cds-WP_249401513.1;Parent=gene-AC57_RS0124960;Dbxref=GenBank:WP_249401513.1;Name=WP_249401513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737510.1;locus_tag=AC57_RS0124960;product=fimbrial protein;protein_id=WP_249401513.1;transl_table=11 NZ_JJLR01000116.1 RefSeq gene 1175 1375 . - . ID=gene-AC57_RS08090;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AC57_RS08090;old_locus_tag=AC57_3370 NZ_JJLR01000116.1 Protein Homology CDS 1175 1375 . - 0 ID=cds-WP_000350095.1;Parent=gene-AC57_RS08090;Dbxref=GenBank:WP_000350095.1;Name=WP_000350095.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417521.1;locus_tag=AC57_RS08090;product=cell surface composition regulator GlgS;protein_id=WP_000350095.1;transl_table=11 NZ_JJLR01000116.1 RefSeq gene 1644 2273 . + . ID=gene-AC57_RS08085;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;locus_tag=AC57_RS08085;old_locus_tag=AC57_3371 NZ_JJLR01000116.1 Protein Homology CDS 1644 2273 . + 0 ID=cds-WP_000599926.1;Parent=gene-AC57_RS08085;Dbxref=GenBank:WP_000599926.1;Name=WP_000599926.1;gbkey=CDS;gene=yqiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417522.1;locus_tag=AC57_RS08085;product=OB-fold-containig protein;protein_id=WP_000599926.1;transl_table=11 NZ_JJLR01000116.1 RefSeq gene 2300 3961 . + . ID=gene-AC57_RS08080;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=AC57_RS08080;old_locus_tag=AC57_3372 NZ_JJLR01000116.1 Protein Homology CDS 2300 3961 . + 0 ID=cds-WP_032237328.1;Parent=gene-AC57_RS08080;Dbxref=GenBank:WP_032237328.1;Name=WP_032237328.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;gene=yqiK;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417523.1;locus_tag=AC57_RS08080;product=flotillin family protein;protein_id=WP_032237328.1;transl_table=11 NZ_JJLR01000116.1 RefSeq gene 4201 4260 . + . ID=gene-AC57_RS29970;Name=AC57_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29970 NZ_JJLR01000116.1 Protein Homology CDS 4201 4260 . + 0 ID=cds-WP_001387081.1;Parent=gene-AC57_RS29970;Dbxref=GenBank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AC57_RS29970;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11 NZ_JJLR01000116.1 RefSeq pseudogene 4342 4561 . + . ID=gene-AC57_RS08075;Name=AC57_RS08075;end_range=4561,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS08075;old_locus_tag=AC57_3373;partial=true;pseudo=true NZ_JJLR01000116.1 Protein Homology CDS 4342 4561 . + 0 ID=cds-AC57_RS08075;Parent=gene-AC57_RS08075;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4561,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS08075;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000117.1 1 47731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000117.1 RefSeq region 1 47731 . + . ID=NZ_JJLR01000117.1:1..47731;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000117.1 RefSeq pseudogene 1 156 . + . ID=gene-AC57_RS0124975;Name=AC57_RS0124975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0124975;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000117.1 Protein Homology CDS 1 156 . + 0 ID=cds-AC57_RS0124975;Parent=gene-AC57_RS0124975;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS0124975;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 627 686 . + . ID=gene-AC57_RS29975;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AC57_RS29975 NZ_JJLR01000117.1 Protein Homology CDS 627 686 . + 0 ID=cds-WP_001387082.1;Parent=gene-AC57_RS29975;Dbxref=GenBank:WP_001387082.1;Name=WP_001387082.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AC57_RS29975;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387082.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 806 2239 . - . ID=gene-AC57_RS08070;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AC57_RS08070;old_locus_tag=AC57_3374 NZ_JJLR01000117.1 Protein Homology CDS 806 2239 . - 0 ID=cds-WP_000869178.1;Parent=gene-AC57_RS08070;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AC57_RS08070;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 2287 5127 . - . ID=gene-AC57_RS08065;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AC57_RS08065;old_locus_tag=AC57_3375 NZ_JJLR01000117.1 Protein Homology CDS 2287 5127 . - 0 ID=cds-WP_001329420.1;Parent=gene-AC57_RS08065;Dbxref=GenBank:WP_001329420.1;Name=WP_001329420.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AC57_RS08065;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_001329420.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 5150 6451 . - . ID=gene-AC57_RS08060;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AC57_RS08060;old_locus_tag=AC57_3376 NZ_JJLR01000117.1 Protein Homology CDS 5150 6451 . - 0 ID=cds-WP_000046281.1;Parent=gene-AC57_RS08060;Dbxref=GenBank:WP_000046281.1;Name=WP_000046281.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417526.1;locus_tag=AC57_RS08060;product=inorganic triphosphatase;protein_id=WP_000046281.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 6693 7313 . + . ID=gene-AC57_RS08055;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AC57_RS08055;old_locus_tag=AC57_3377 NZ_JJLR01000117.1 Protein Homology CDS 6693 7313 . + 0 ID=cds-WP_001125331.1;Parent=gene-AC57_RS08055;Dbxref=GenBank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AC57_RS08055;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 7377 8615 . + . ID=gene-AC57_RS08050;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AC57_RS08050;old_locus_tag=AC57_3378 NZ_JJLR01000117.1 Protein Homology CDS 7377 8615 . + 0 ID=cds-WP_000708487.1;Parent=gene-AC57_RS08050;Dbxref=GenBank:WP_000708487.1;Name=WP_000708487.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417528.1;locus_tag=AC57_RS08050;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_000708487.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 8796 9617 . - . ID=gene-AC57_RS08045;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AC57_RS08045;old_locus_tag=AC57_3379 NZ_JJLR01000117.1 Protein Homology CDS 8796 9617 . - 0 ID=cds-WP_001281927.1;Parent=gene-AC57_RS08045;Dbxref=GenBank:WP_001281927.1;Name=WP_001281927.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=AC57_RS08045;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001281927.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 9707 10075 . - . ID=gene-AC57_RS08040;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AC57_RS08040;old_locus_tag=AC57_3380 NZ_JJLR01000117.1 Protein Homology CDS 9707 10075 . - 0 ID=cds-WP_001295541.1;Parent=gene-AC57_RS08040;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AC57_RS08040;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 10180 10797 . + . ID=gene-AC57_RS08035;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AC57_RS08035;old_locus_tag=AC57_3381 NZ_JJLR01000117.1 Protein Homology CDS 10180 10797 . + 0 ID=cds-WP_001272796.1;Parent=gene-AC57_RS08035;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AC57_RS08035;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 10810 11742 . - . ID=gene-AC57_RS08030;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AC57_RS08030;old_locus_tag=AC57_3382 NZ_JJLR01000117.1 Protein Homology CDS 10810 11742 . - 0 ID=cds-WP_000935206.1;Parent=gene-AC57_RS08030;Dbxref=GenBank:WP_000935206.1;Name=WP_000935206.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AC57_RS08030;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_000935206.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 11949 12860 . + . ID=gene-AC57_RS08025;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AC57_RS08025;old_locus_tag=AC57_3383 NZ_JJLR01000117.1 Protein Homology CDS 11949 12860 . + 0 ID=cds-WP_000986797.1;Parent=gene-AC57_RS08025;Dbxref=GenBank:WP_000986797.1;Name=WP_000986797.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417533.1;locus_tag=AC57_RS08025;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_000986797.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 12857 13462 . + . ID=gene-AC57_RS08020;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AC57_RS08020;old_locus_tag=AC57_3384 NZ_JJLR01000117.1 Protein Homology CDS 12857 13462 . + 0 ID=cds-WP_000722957.1;Parent=gene-AC57_RS08020;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AC57_RS08020;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 13510 14973 . + . ID=gene-AC57_RS08015;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AC57_RS08015;old_locus_tag=AC57_3385 NZ_JJLR01000117.1 Protein Homology CDS 13510 14973 . + 0 ID=cds-WP_000804973.1;Parent=gene-AC57_RS08015;Dbxref=GenBank:WP_000804973.1;Name=WP_000804973.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417535.1;locus_tag=AC57_RS08015;product=L-tartrate/succinate antiporter;protein_id=WP_000804973.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 15016 16029 . - . ID=gene-AC57_RS08010;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AC57_RS08010;old_locus_tag=AC57_3386 NZ_JJLR01000117.1 Protein Homology CDS 15016 16029 . - 0 ID=cds-WP_001264352.1;Parent=gene-AC57_RS08010;Dbxref=GenBank:WP_001264352.1;Name=WP_001264352.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AC57_RS08010;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264352.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 16267 16482 . + . ID=gene-AC57_RS08005;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AC57_RS08005;old_locus_tag=AC57_3387 NZ_JJLR01000117.1 Protein Homology CDS 16267 16482 . + 0 ID=cds-WP_001144069.1;Parent=gene-AC57_RS08005;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AC57_RS08005;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 16593 18338 . + . ID=gene-AC57_RS08000;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AC57_RS08000;old_locus_tag=AC57_3388 NZ_JJLR01000117.1 Protein Homology CDS 16593 18338 . + 0 ID=cds-WP_032279740.1;Parent=gene-AC57_RS08000;Dbxref=GenBank:WP_032279740.1;Name=WP_032279740.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AC57_RS08000;product=DNA primase;protein_id=WP_032279740.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 18533 20374 . + . ID=gene-AC57_RS07995;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AC57_RS07995;old_locus_tag=AC57_3389 NZ_JJLR01000117.1 Protein Homology CDS 18533 20374 . + 0 ID=cds-WP_001479558.1;Parent=gene-AC57_RS07995;Dbxref=GenBank:WP_001479558.1;Name=WP_001479558.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AC57_RS07995;product=RNA polymerase sigma factor RpoD;protein_id=WP_001479558.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 20453 20959 . - . ID=gene-AC57_RS07990;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AC57_RS07990;old_locus_tag=AC57_3390 NZ_JJLR01000117.1 Protein Homology CDS 20453 20959 . - 0 ID=cds-WP_000228937.1;Parent=gene-AC57_RS07990;Dbxref=GenBank:WP_000228937.1;Name=WP_000228937.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417540.1;locus_tag=AC57_RS07990;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_000228937.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 21084 21159 . + . ID=gene-AC57_RS07985;Name=AC57_RS07985;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS07985;old_locus_tag=AC57_3391 NZ_JJLR01000117.1 tRNAscan-SE tRNA 21084 21159 . + . ID=rna-AC57_RS07985;Parent=gene-AC57_RS07985;anticodon=(pos:21117..21119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS07985;product=tRNA-Ile NZ_JJLR01000117.1 tRNAscan-SE exon 21084 21159 . + . ID=exon-AC57_RS07985-1;Parent=rna-AC57_RS07985;anticodon=(pos:21117..21119);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS07985;product=tRNA-Ile NZ_JJLR01000117.1 RefSeq gene 21213 21977 . - . ID=gene-AC57_RS07980;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AC57_RS07980;old_locus_tag=AC57_3392 NZ_JJLR01000117.1 Protein Homology CDS 21213 21977 . - 0 ID=cds-WP_001066494.1;Parent=gene-AC57_RS07980;Dbxref=GenBank:WP_001066494.1;Name=WP_001066494.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417541.1;locus_tag=AC57_RS07980;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_001066494.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 22265 22888 . + . ID=gene-AC57_RS07975;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AC57_RS07975;old_locus_tag=AC57_3393 NZ_JJLR01000117.1 Protein Homology CDS 22265 22888 . + 0 ID=cds-WP_000018003.1;Parent=gene-AC57_RS07975;Dbxref=GenBank:WP_000018003.1;Name=WP_000018003.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417542.1;locus_tag=AC57_RS07975;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018003.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 23042 24562 . - . ID=gene-AC57_RS07970;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=AC57_RS07970;old_locus_tag=AC57_3394 NZ_JJLR01000117.1 Protein Homology CDS 23042 24562 . - 0 ID=cds-WP_032279738.1;Parent=gene-AC57_RS07970;Dbxref=GenBank:WP_032279738.1;Name=WP_032279738.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417543.1;locus_tag=AC57_RS07970;product=aerotaxis sensor receptor Aer;protein_id=WP_032279738.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 24980 26359 . + . ID=gene-AC57_RS07965;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AC57_RS07965;old_locus_tag=AC57_3395 NZ_JJLR01000117.1 Protein Homology CDS 24980 26359 . + 0 ID=cds-WP_001301395.1;Parent=gene-AC57_RS07965;Dbxref=GenBank:WP_001301395.1;Name=WP_001301395.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AC57_RS07965;product=putrescine aminotransferase;protein_id=WP_001301395.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 26401 26733 . - . ID=gene-AC57_RS07960;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AC57_RS07960;old_locus_tag=AC57_3396 NZ_JJLR01000117.1 Protein Homology CDS 26401 26733 . - 0 ID=cds-WP_000450594.1;Parent=gene-AC57_RS07960;Dbxref=GenBank:WP_000450594.1;Name=WP_000450594.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417545.1;locus_tag=AC57_RS07960;product=tRNA-binding protein;protein_id=WP_000450594.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 26952 27935 . + . ID=gene-AC57_RS07955;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AC57_RS07955;old_locus_tag=AC57_3397 NZ_JJLR01000117.1 Protein Homology CDS 26952 27935 . + 0 ID=cds-WP_000212475.1;Parent=gene-AC57_RS07955;Dbxref=GenBank:WP_000212475.1;Name=WP_000212475.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417546.1;locus_tag=AC57_RS07955;product=transcriptional regulator EbgR;protein_id=WP_000212475.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 28119 31211 . + . ID=gene-AC57_RS07950;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AC57_RS07950;old_locus_tag=AC57_3398 NZ_JJLR01000117.1 Protein Homology CDS 28119 31211 . + 0 ID=cds-WP_001082900.1;Parent=gene-AC57_RS07950;Dbxref=GenBank:WP_001082900.1;Name=WP_001082900.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311985.2;locus_tag=AC57_RS07950;product=beta-galactosidase subunit alpha;protein_id=WP_001082900.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 31208 31657 . + . ID=gene-AC57_RS07945;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AC57_RS07945;old_locus_tag=AC57_3399 NZ_JJLR01000117.1 Protein Homology CDS 31208 31657 . + 0 ID=cds-WP_001219954.1;Parent=gene-AC57_RS07945;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AC57_RS07945;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 31720 33153 . + . ID=gene-AC57_RS07940;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=AC57_RS07940;old_locus_tag=AC57_3400 NZ_JJLR01000117.1 Protein Homology CDS 31720 33153 . + 0 ID=cds-WP_001285446.1;Parent=gene-AC57_RS07940;Dbxref=GenBank:WP_001285446.1;Name=WP_001285446.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311987.1;locus_tag=AC57_RS07940;product=amino acid permease;protein_id=WP_001285446.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 33287 34357 . + . ID=gene-AC57_RS07935;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AC57_RS07935;old_locus_tag=AC57_3401 NZ_JJLR01000117.1 Protein Homology CDS 33287 34357 . + 0 ID=cds-WP_000767652.1;Parent=gene-AC57_RS07935;Dbxref=GenBank:WP_000767652.1;Name=WP_000767652.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417550.1;locus_tag=AC57_RS07935;product=protein YgjJ;protein_id=WP_000767652.1;transl_table=11 NZ_JJLR01000117.1 RefSeq pseudogene 34374 36725 . + . ID=gene-AC57_RS0124990;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=pseudogene;locus_tag=AC57_RS0124990;pseudo=true NZ_JJLR01000117.1 Protein Homology CDS 34374 36725 . + 0 ID=cds-AC57_RS0124990;Parent=gene-AC57_RS0124990;Note=internal stop;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417551.1;locus_tag=AC57_RS0124990;product=alpha-glucosidase;pseudo=true;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 37351 39369 . + . ID=gene-AC57_RS07930;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AC57_RS07930;old_locus_tag=AC57_3404 NZ_JJLR01000117.1 Protein Homology CDS 37351 39369 . + 0 ID=cds-WP_001531358.1;Parent=gene-AC57_RS07930;Dbxref=GenBank:WP_001531358.1;Name=WP_001531358.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417552.1;locus_tag=AC57_RS07930;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_001531358.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 39414 39830 . - . ID=gene-AC57_RS07925;Name=higA;gbkey=Gene;gene=higA;gene_biotype=protein_coding;locus_tag=AC57_RS07925;old_locus_tag=AC57_3405 NZ_JJLR01000117.1 Protein Homology CDS 39414 39830 . - 0 ID=cds-WP_000560266.1;Parent=gene-AC57_RS07925;Dbxref=GenBank:WP_000560266.1;Name=WP_000560266.1;gbkey=CDS;gene=higA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417553.1;locus_tag=AC57_RS07925;product=type II toxin-antitoxin system antitoxin HigA;protein_id=WP_000560266.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 39827 40141 . - . ID=gene-AC57_RS07920;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=AC57_RS07920;old_locus_tag=AC57_3406 NZ_JJLR01000117.1 Protein Homology CDS 39827 40141 . - 0 ID=cds-WP_000550189.1;Parent=gene-AC57_RS07920;Dbxref=GenBank:WP_000550189.1;Name=WP_000550189.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311992.1;locus_tag=AC57_RS07920;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_000550189.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 40425 41561 . - . ID=gene-AC57_RS07915;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AC57_RS07915;old_locus_tag=AC57_3407 NZ_JJLR01000117.1 Protein Homology CDS 40425 41561 . - 0 ID=cds-WP_000018695.1;Parent=gene-AC57_RS07915;Dbxref=GenBank:WP_000018695.1;Name=WP_000018695.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AC57_RS07915;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_000018695.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 41646 42149 . + . ID=gene-AC57_RS07910;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AC57_RS07910;old_locus_tag=AC57_3408 NZ_JJLR01000117.1 Protein Homology CDS 41646 42149 . + 0 ID=cds-WP_001300832.1;Parent=gene-AC57_RS07910;Dbxref=GenBank:WP_001300832.1;Name=WP_001300832.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417556.2;locus_tag=AC57_RS07910;product=M48 metallopeptidase family protein;protein_id=WP_001300832.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 42226 42918 . + . ID=gene-AC57_RS07905;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AC57_RS07905;old_locus_tag=AC57_3409 NZ_JJLR01000117.1 Protein Homology CDS 42226 42918 . + 0 ID=cds-WP_000942548.1;Parent=gene-AC57_RS07905;Dbxref=GenBank:WP_000942548.1;Name=WP_000942548.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417557.1;locus_tag=AC57_RS07905;product=SanA/YdcF family protein;protein_id=WP_000942548.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 42997 43983 . + . ID=gene-AC57_RS07900;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=AC57_RS07900;old_locus_tag=AC57_3410 NZ_JJLR01000117.1 Protein Homology CDS 42997 43983 . + 0 ID=cds-WP_000617698.1;Parent=gene-AC57_RS07900;Dbxref=GenBank:WP_000617698.1;Name=WP_000617698.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AC57_RS07900;product=Gfo/Idh/MocA family protein;protein_id=WP_000617698.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 44266 45231 . + . ID=gene-AC57_RS07895;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AC57_RS07895;old_locus_tag=AC57_3411 NZ_JJLR01000117.1 Protein Homology CDS 44266 45231 . + 0 ID=cds-WP_001098805.1;Parent=gene-AC57_RS07895;Dbxref=GenBank:WP_001098805.1;Name=WP_001098805.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098790.1;locus_tag=AC57_RS07895;product=TerC family membrane protein Alx;protein_id=WP_001098805.1;transl_table=11 NZ_JJLR01000117.1 RefSeq gene 45847 47091 . + . ID=gene-AC57_RS07890;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AC57_RS07890;old_locus_tag=AC57_3412 NZ_JJLR01000117.1 Protein Homology CDS 45847 47091 . + 0 ID=cds-WP_000211655.1;Parent=gene-AC57_RS07890;Dbxref=GenBank:WP_000211655.1;Name=WP_000211655.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AC57_RS07890;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_JJLR01000117.1 RefSeq pseudogene 47096 47401 . - . ID=gene-AC57_RS07885;Name=AC57_RS07885;end_range=47401,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS07885;old_locus_tag=AC57_3413;partial=true;pseudo=true NZ_JJLR01000117.1 Protein Homology CDS 47096 47401 . - 0 ID=cds-AC57_RS07885;Parent=gene-AC57_RS07885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=47401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=AC57_RS07885;partial=true;product=YgjV family protein;pseudo=true;transl_table=11 NZ_JJLR01000117.1 RefSeq pseudogene 47458 47731 . + . ID=gene-AC57_RS27735;Name=AC57_RS27735;end_range=47731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27735;old_locus_tag=AC57_3414;partial=true;pseudo=true NZ_JJLR01000117.1 Protein Homology CDS 47458 47731 . + 0 ID=cds-AC57_RS27735;Parent=gene-AC57_RS27735;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=47731,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS27735;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000118.1 1 11863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000118.1 RefSeq region 1 11863 . + . ID=NZ_JJLR01000118.1:1..11863;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000118.1 RefSeq gene 1 279 . + . ID=gene-AC57_RS07880;Name=AC57_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07880;old_locus_tag=AC57_3415;partial=true;start_range=.,1 NZ_JJLR01000118.1 Protein Homology CDS 1 279 . + 0 ID=cds-WP_005129930.1-3;Parent=gene-AC57_RS07880;Dbxref=GenBank:WP_005129930.1;Name=WP_005129930.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07880;partial=true;product=IS1 family transposase;protein_id=WP_005129930.1;start_range=.,1;transl_table=11 NZ_JJLR01000118.1 RefSeq pseudogene 293 547 . - . ID=gene-AC57_RS07875;Name=AC57_RS07875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS07875;old_locus_tag=AC57_3416;partial=true;pseudo=true;start_range=.,293 NZ_JJLR01000118.1 Protein Homology CDS 293 547 . - 0 ID=cds-AC57_RS07875;Parent=gene-AC57_RS07875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=AC57_RS07875;partial=true;product=YgjV family protein;pseudo=true;start_range=.,293;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 630 2117 . - . ID=gene-AC57_RS07870;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AC57_RS07870;old_locus_tag=AC57_3417 NZ_JJLR01000118.1 Protein Homology CDS 630 2117 . - 0 ID=cds-WP_001199390.1;Parent=gene-AC57_RS07870;Dbxref=GenBank:WP_001199390.1;Name=WP_001199390.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AC57_RS07870;product=altronate dehydratase;protein_id=WP_001199390.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 2132 3544 . - . ID=gene-AC57_RS07865;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AC57_RS07865;old_locus_tag=AC57_3418 NZ_JJLR01000118.1 Protein Homology CDS 2132 3544 . - 0 ID=cds-WP_000187442.1;Parent=gene-AC57_RS07865;Dbxref=GenBank:WP_000187442.1;Name=WP_000187442.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AC57_RS07865;product=glucuronate isomerase;protein_id=WP_000187442.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 4027 5325 . + . ID=gene-AC57_RS07860;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AC57_RS07860;old_locus_tag=AC57_3419 NZ_JJLR01000118.1 Protein Homology CDS 4027 5325 . + 0 ID=cds-WP_001226465.1;Parent=gene-AC57_RS07860;Dbxref=GenBank:WP_001226465.1;Name=WP_001226465.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AC57_RS07860;product=hexuronate transporter ExuT;protein_id=WP_001226465.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 5455 6231 . + . ID=gene-AC57_RS07855;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AC57_RS07855;old_locus_tag=AC57_3420 NZ_JJLR01000118.1 Protein Homology CDS 5455 6231 . + 0 ID=cds-WP_000406493.1;Parent=gene-AC57_RS07855;Dbxref=GenBank:WP_000406493.1;Name=WP_000406493.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AC57_RS07855;product=transcriptional regulator ExuR;protein_id=WP_000406493.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 6471 6554 . + . ID=gene-AC57_RS30550;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AC57_RS30550 NZ_JJLR01000118.1 Protein Homology CDS 6471 6554 . + 0 ID=cds-WP_211180508.1;Parent=gene-AC57_RS30550;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AC57_RS30550;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 6576 7238 . + . ID=gene-AC57_RS07850;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AC57_RS07850;old_locus_tag=AC57_3423 NZ_JJLR01000118.1 Protein Homology CDS 6576 7238 . + 0 ID=cds-WP_000422149.1;Parent=gene-AC57_RS07850;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AC57_RS07850;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 7242 7625 . + . ID=gene-AC57_RS07845;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AC57_RS07845;old_locus_tag=AC57_3424 NZ_JJLR01000118.1 Protein Homology CDS 7242 7625 . + 0 ID=cds-WP_001166760.1;Parent=gene-AC57_RS07845;Dbxref=GenBank:WP_001166760.1;Name=WP_001166760.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417567.1;locus_tag=AC57_RS07845;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166760.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 7772 8140 . + . ID=gene-AC57_RS07840;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AC57_RS07840;old_locus_tag=AC57_3425 NZ_JJLR01000118.1 Protein Homology CDS 7772 8140 . + 0 ID=cds-WP_001295543.1;Parent=gene-AC57_RS07840;Dbxref=GenBank:WP_001295543.1;Name=WP_001295543.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AC57_RS07840;product=DUF1090 family protein YqjC;protein_id=WP_001295543.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 8178 8483 . + . ID=gene-AC57_RS07835;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AC57_RS07835;old_locus_tag=AC57_3426 NZ_JJLR01000118.1 Protein Homology CDS 8178 8483 . + 0 ID=cds-WP_000031415.1;Parent=gene-AC57_RS07835;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AC57_RS07835;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 8486 8890 . + . ID=gene-AC57_RS07830;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AC57_RS07830;old_locus_tag=AC57_3427 NZ_JJLR01000118.1 Protein Homology CDS 8486 8890 . + 0 ID=cds-WP_000785722.1;Parent=gene-AC57_RS07830;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AC57_RS07830;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 8880 9179 . + . ID=gene-AC57_RS07825;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AC57_RS07825;old_locus_tag=AC57_3428 NZ_JJLR01000118.1 Protein Homology CDS 8880 9179 . + 0 ID=cds-WP_032237323.1;Parent=gene-AC57_RS07825;Dbxref=GenBank:WP_032237323.1;Name=WP_032237323.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417571.1;locus_tag=AC57_RS07825;product=YqjK-like family protein;protein_id=WP_032237323.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 9365 9757 . + . ID=gene-AC57_RS07820;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AC57_RS07820;old_locus_tag=AC57_3429 NZ_JJLR01000118.1 Protein Homology CDS 9365 9757 . + 0 ID=cds-WP_000732240.1;Parent=gene-AC57_RS07820;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AC57_RS07820;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 9827 10813 . + . ID=gene-AC57_RS07815;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AC57_RS07815;old_locus_tag=AC57_3430 NZ_JJLR01000118.1 Protein Homology CDS 9827 10813 . + 0 ID=cds-WP_000531213.1;Parent=gene-AC57_RS07815;Dbxref=GenBank:WP_000531213.1;Name=WP_000531213.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417573.1;locus_tag=AC57_RS07815;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_000531213.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 11107 11472 . + . ID=gene-AC57_RS07810;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AC57_RS07810;old_locus_tag=AC57_3431 NZ_JJLR01000118.1 Protein Homology CDS 11107 11472 . + 0 ID=cds-WP_000384145.1;Parent=gene-AC57_RS07810;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AC57_RS07810;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JJLR01000118.1 RefSeq gene 11596 11863 . + . ID=gene-AC57_RS07805;Name=AC57_RS07805;end_range=11863,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07805;old_locus_tag=AC57_3432;partial=true NZ_JJLR01000118.1 Protein Homology CDS 11596 11863 . + 0 ID=cds-WP_001483704.1-5;Parent=gene-AC57_RS07805;Dbxref=GenBank:WP_001483704.1;Name=WP_001483704.1;end_range=11863,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07805;partial=true;product=IS1-like element transposase;protein_id=WP_001483704.1;transl_table=11 ##sequence-region NZ_JJLR01000119.1 1 34145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000119.1 RefSeq region 1 34145 . + . ID=NZ_JJLR01000119.1:1..34145;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000119.1 RefSeq gene 1 276 . + . ID=gene-AC57_RS07800;Name=AC57_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07800;old_locus_tag=AC57_3433;partial=true;start_range=.,1 NZ_JJLR01000119.1 Protein Homology CDS 1 276 . + 0 ID=cds-WP_000364013.1-4;Parent=gene-AC57_RS07800;Dbxref=GenBank:WP_000364013.1;Name=WP_000364013.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07800;partial=true;product=IS1 family transposase;protein_id=WP_000364013.1;start_range=.,1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 473 829 . + . ID=gene-AC57_RS07795;Name=yhaI;gbkey=Gene;gene=yhaI;gene_biotype=protein_coding;locus_tag=AC57_RS07795;old_locus_tag=AC57_3434 NZ_JJLR01000119.1 Protein Homology CDS 473 829 . + 0 ID=cds-WP_001198807.1;Parent=gene-AC57_RS07795;Dbxref=GenBank:WP_001198807.1;Name=WP_001198807.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AC57_RS07795;product=DUF805 domain-containing protein;protein_id=WP_001198807.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 880 1776 . - . ID=gene-AC57_RS07790;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AC57_RS07790;old_locus_tag=AC57_3435 NZ_JJLR01000119.1 Protein Homology CDS 880 1776 . - 0 ID=cds-WP_001041009.1;Parent=gene-AC57_RS07790;Dbxref=GenBank:WP_001041009.1;Name=WP_001041009.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AC57_RS07790;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041009.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 1881 2582 . + . ID=gene-AC57_RS07785;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AC57_RS07785;old_locus_tag=AC57_3436 NZ_JJLR01000119.1 Protein Homology CDS 1881 2582 . + 0 ID=cds-WP_000633576.1;Parent=gene-AC57_RS07785;Dbxref=GenBank:WP_000633576.1;Name=WP_000633576.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AC57_RS07785;product=pirin family protein;protein_id=WP_000633576.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 2605 2769 . + . ID=gene-AC57_RS07780;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AC57_RS07780;old_locus_tag=AC57_3437 NZ_JJLR01000119.1 Protein Homology CDS 2605 2769 . + 0 ID=cds-WP_001345966.1;Parent=gene-AC57_RS07780;Dbxref=GenBank:WP_001345966.1;Name=WP_001345966.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417578.2;locus_tag=AC57_RS07780;product=protein YhaL;protein_id=WP_001345966.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 2903 4213 . - . ID=gene-AC57_RS07775;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AC57_RS07775;old_locus_tag=AC57_3438 NZ_JJLR01000119.1 Protein Homology CDS 2903 4213 . - 0 ID=cds-WP_000460499.1;Parent=gene-AC57_RS07775;Dbxref=GenBank:WP_000460499.1;Name=WP_000460499.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026202.1;locus_tag=AC57_RS07775;product=cysteine desulfidase;protein_id=WP_000460499.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 4241 5572 . - . ID=gene-AC57_RS07770;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AC57_RS07770;old_locus_tag=AC57_3439 NZ_JJLR01000119.1 Protein Homology CDS 4241 5572 . - 0 ID=cds-WP_000401598.1;Parent=gene-AC57_RS07770;Dbxref=GenBank:WP_000401598.1;Name=WP_000401598.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AC57_RS07770;product=amino acid permease;protein_id=WP_000401598.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 5847 7211 . - . ID=gene-AC57_RS07765;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AC57_RS07765;old_locus_tag=AC57_3440 NZ_JJLR01000119.1 Protein Homology CDS 5847 7211 . - 0 ID=cds-WP_032181379.1;Parent=gene-AC57_RS07765;Dbxref=GenBank:WP_032181379.1;Name=WP_032181379.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AC57_RS07765;product=L-serine ammonia-lyase;protein_id=WP_032181379.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 7283 7672 . - . ID=gene-AC57_RS07760;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AC57_RS07760;old_locus_tag=AC57_3441 NZ_JJLR01000119.1 Protein Homology CDS 7283 7672 . - 0 ID=cds-WP_000719990.1;Parent=gene-AC57_RS07760;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AC57_RS07760;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 7686 9980 . - . ID=gene-AC57_RS07755;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AC57_RS07755;old_locus_tag=AC57_3442 NZ_JJLR01000119.1 Protein Homology CDS 7686 9980 . - 0 ID=cds-WP_003987236.1;Parent=gene-AC57_RS07755;Dbxref=GenBank:WP_003987236.1;Name=WP_003987236.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026205.1;locus_tag=AC57_RS07755;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_003987236.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 10014 11222 . - . ID=gene-AC57_RS07750;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AC57_RS07750;old_locus_tag=AC57_3443 NZ_JJLR01000119.1 Protein Homology CDS 10014 11222 . - 0 ID=cds-WP_001295545.1;Parent=gene-AC57_RS07750;Dbxref=GenBank:WP_001295545.1;Name=WP_001295545.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=AC57_RS07750;product=propionate kinase;protein_id=WP_001295545.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 11248 12579 . - . ID=gene-AC57_RS07745;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AC57_RS07745;old_locus_tag=AC57_3444 NZ_JJLR01000119.1 Protein Homology CDS 11248 12579 . - 0 ID=cds-WP_032279859.1;Parent=gene-AC57_RS07745;Dbxref=GenBank:WP_032279859.1;Name=WP_032279859.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AC57_RS07745;product=threonine/serine transporter TdcC;protein_id=WP_032279859.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 12601 13590 . - . ID=gene-AC57_RS07740;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AC57_RS07740;old_locus_tag=AC57_3445 NZ_JJLR01000119.1 Protein Homology CDS 12601 13590 . - 0 ID=cds-WP_000548347.1;Parent=gene-AC57_RS07740;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AC57_RS07740;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 13689 14627 . - . ID=gene-AC57_RS07735;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AC57_RS07735;old_locus_tag=AC57_3446 NZ_JJLR01000119.1 Protein Homology CDS 13689 14627 . - 0 ID=cds-WP_001555067.1;Parent=gene-AC57_RS07735;Dbxref=GenBank:WP_001555067.1;Name=WP_001555067.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AC57_RS07735;product=transcriptional regulator TdcA;protein_id=WP_001555067.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 14942 15160 . + . ID=gene-AC57_RS30460;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AC57_RS30460 NZ_JJLR01000119.1 Protein Homology CDS 14942 15160 . + 0 ID=cds-WP_001301311.1;Parent=gene-AC57_RS30460;Dbxref=GenBank:WP_001301311.1;Name=WP_001301311.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AC57_RS30460;product=transcriptional activator TdcR;protein_id=WP_001301311.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 15416 15955 . + . ID=gene-AC57_RS07725;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AC57_RS07725;old_locus_tag=AC57_3448 NZ_JJLR01000119.1 Protein Homology CDS 15416 15955 . + 0 ID=cds-WP_032285728.1;Parent=gene-AC57_RS07725;Dbxref=GenBank:WP_032285728.1;Name=WP_032285728.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417590.2;locus_tag=AC57_RS07725;product=protein YhaB;protein_id=WP_032285728.1;transl_table=11 NZ_JJLR01000119.1 RefSeq pseudogene 15977 17165 . + . ID=gene-AC57_RS07720;Name=yhaC;gbkey=Gene;gene=yhaC;gene_biotype=pseudogene;locus_tag=AC57_RS07720;old_locus_tag=AC57_3449;pseudo=true NZ_JJLR01000119.1 Protein Homology CDS 15977 17165 . + 0 ID=cds-AC57_RS07720;Parent=gene-AC57_RS07720;Note=frameshifted;gbkey=CDS;gene=yhaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AC57_RS07720;product=YhaC family protein;pseudo=true;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 17673 18049 . - . ID=gene-AC57_RS26080;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AC57_RS26080 NZ_JJLR01000119.1 cmsearch RNase_P_RNA 17673 18049 . - . ID=rna-AC57_RS26080;Parent=gene-AC57_RS26080;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26080;product=RNase P RNA component class A NZ_JJLR01000119.1 cmsearch exon 17673 18049 . - . ID=exon-AC57_RS26080-1;Parent=rna-AC57_RS26080;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26080;product=RNase P RNA component class A NZ_JJLR01000119.1 RefSeq gene 18082 19227 . - . ID=gene-AC57_RS07715;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AC57_RS07715;old_locus_tag=AC57_3450 NZ_JJLR01000119.1 Protein Homology CDS 18082 19227 . - 0 ID=cds-WP_032237871.1;Parent=gene-AC57_RS07715;Dbxref=GenBank:WP_032237871.1;Name=WP_032237871.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312029.2;locus_tag=AC57_RS07715;product=glycerate 2-kinase;protein_id=WP_032237871.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 19324 20214 . - . ID=gene-AC57_RS07710;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AC57_RS07710;old_locus_tag=AC57_3451 NZ_JJLR01000119.1 Protein Homology CDS 19324 20214 . - 0 ID=cds-WP_001303675.1;Parent=gene-AC57_RS07710;Dbxref=GenBank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AC57_RS07710;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 20244 21014 . - . ID=gene-AC57_RS07705;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AC57_RS07705;old_locus_tag=AC57_3452 NZ_JJLR01000119.1 Protein Homology CDS 20244 21014 . - 0 ID=cds-WP_001058209.1;Parent=gene-AC57_RS07705;Dbxref=GenBank:WP_001058209.1;Name=WP_001058209.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417595.1;locus_tag=AC57_RS07705;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_001058209.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 21030 22364 . - . ID=gene-AC57_RS07700;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=AC57_RS07700;old_locus_tag=AC57_3453 NZ_JJLR01000119.1 Protein Homology CDS 21030 22364 . - 0 ID=cds-WP_000599636.1;Parent=gene-AC57_RS07700;Dbxref=GenBank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AC57_RS07700;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599636.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 22739 24310 . + . ID=gene-AC57_RS07690;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=AC57_RS07690;old_locus_tag=AC57_3455 NZ_JJLR01000119.1 Protein Homology CDS 22739 24310 . + 0 ID=cds-WP_001273763.1;Parent=gene-AC57_RS07690;Dbxref=GenBank:WP_001273763.1;Name=WP_001273763.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=AC57_RS07690;product=galactarate dehydratase;protein_id=WP_001273763.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 24459 24794 . + . ID=gene-AC57_RS07685;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=AC57_RS07685;old_locus_tag=AC57_3456 NZ_JJLR01000119.1 Protein Homology CDS 24459 24794 . + 0 ID=cds-WP_001307405.1;Parent=gene-AC57_RS07685;Dbxref=GenBank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=AC57_RS07685;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 24794 25258 . + . ID=gene-AC57_RS07680;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;locus_tag=AC57_RS07680;old_locus_tag=AC57_3457 NZ_JJLR01000119.1 Protein Homology CDS 24794 25258 . + 0 ID=cds-WP_000347251.1;Parent=gene-AC57_RS07680;Dbxref=GenBank:WP_000347251.1;Name=WP_000347251.1;gbkey=CDS;gene=yhaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=AC57_RS07680;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347251.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 25313 26122 . - . ID=gene-AC57_RS07675;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AC57_RS07675;old_locus_tag=AC57_3458 NZ_JJLR01000119.1 Protein Homology CDS 25313 26122 . - 0 ID=cds-WP_000072187.1;Parent=gene-AC57_RS07675;Dbxref=GenBank:WP_000072187.1;Name=WP_000072187.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AC57_RS07675;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072187.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 26371 27651 . + . ID=gene-AC57_RS07670;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AC57_RS07670;old_locus_tag=AC57_3459 NZ_JJLR01000119.1 Protein Homology CDS 26371 27651 . + 0 ID=cds-WP_000681920.1;Parent=gene-AC57_RS07670;Dbxref=GenBank:WP_000681920.1;Name=WP_000681920.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=AC57_RS07670;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_000681920.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 27674 28147 . + . ID=gene-AC57_RS07665;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=AC57_RS07665;old_locus_tag=AC57_3460 NZ_JJLR01000119.1 Protein Homology CDS 27674 28147 . + 0 ID=cds-WP_001295547.1;Parent=gene-AC57_RS07665;Dbxref=GenBank:WP_001295547.1;Name=WP_001295547.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312038.2;locus_tag=AC57_RS07665;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_001295547.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 28158 28937 . + . ID=gene-AC57_RS07660;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=AC57_RS07660;old_locus_tag=AC57_3461 NZ_JJLR01000119.1 Protein Homology CDS 28158 28937 . + 0 ID=cds-WP_000406214.1;Parent=gene-AC57_RS07660;Dbxref=GenBank:WP_000406214.1;Name=WP_000406214.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=AC57_RS07660;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_000406214.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 28927 29805 . + . ID=gene-AC57_RS07655;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=AC57_RS07655;old_locus_tag=AC57_3462 NZ_JJLR01000119.1 Protein Homology CDS 28927 29805 . + 0 ID=cds-WP_001300474.1;Parent=gene-AC57_RS07655;Dbxref=GenBank:WP_001300474.1;Name=WP_001300474.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=AC57_RS07655;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_001300474.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 29823 30257 . + . ID=gene-AC57_RS07650;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=AC57_RS07650;old_locus_tag=AC57_3463 NZ_JJLR01000119.1 Protein Homology CDS 29823 30257 . + 0 ID=cds-WP_000948824.1;Parent=gene-AC57_RS07650;Dbxref=GenBank:WP_000948824.1;Name=WP_000948824.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=AC57_RS07650;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_000948824.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 30254 31387 . + . ID=gene-AC57_RS07645;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AC57_RS07645;old_locus_tag=AC57_3464 NZ_JJLR01000119.1 Protein Homology CDS 30254 31387 . + 0 ID=cds-WP_032237868.1;Parent=gene-AC57_RS07645;Dbxref=GenBank:WP_032237868.1;Name=WP_032237868.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=AC57_RS07645;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_032237868.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 31738 32892 . + . ID=gene-AC57_RS07640;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=AC57_RS07640;old_locus_tag=AC57_3466 NZ_JJLR01000119.1 Protein Homology CDS 31738 32892 . + 0 ID=cds-WP_001114869.1;Parent=gene-AC57_RS07640;Dbxref=GenBank:WP_001114869.1;Name=WP_001114869.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=AC57_RS07640;product=AgaS family sugar isomerase;protein_id=WP_001114869.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 32905 33765 . + . ID=gene-AC57_RS07635;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=AC57_RS07635;old_locus_tag=AC57_3467 NZ_JJLR01000119.1 Protein Homology CDS 32905 33765 . + 0 ID=cds-WP_000022766.1;Parent=gene-AC57_RS07635;Dbxref=GenBank:WP_000022766.1;Name=WP_000022766.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=AC57_RS07635;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_000022766.1;transl_table=11 NZ_JJLR01000119.1 RefSeq gene 33954 34145 . + . ID=gene-AC57_RS27755;Name=AC57_RS27755;end_range=34145,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27755;old_locus_tag=AC57_3468;partial=true NZ_JJLR01000119.1 Protein Homology CDS 33954 34145 . + 0 ID=cds-WP_001396889.1-2;Parent=gene-AC57_RS27755;Dbxref=GenBank:WP_001396889.1;Name=WP_001396889.1;Ontology_term=GO:0006313;end_range=34145,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27755;partial=true;product=IS1 family transposase;protein_id=WP_001396889.1;transl_table=11 ##sequence-region NZ_JJLR01000120.1 1 953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000120.1 RefSeq region 1 953 . + . ID=NZ_JJLR01000120.1:1..953;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000120.1 RefSeq gene 1 260 . + . ID=gene-AC57_RS07630;Name=AC57_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07630;old_locus_tag=AC57_3469;partial=true;start_range=.,1 NZ_JJLR01000120.1 Protein Homology CDS 1 260 . + 2 ID=cds-WP_000642053.1-3;Parent=gene-AC57_RS07630;Dbxref=GenBank:WP_000642053.1;Name=WP_000642053.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07630;partial=true;product=IS1 family transposase;protein_id=WP_000642053.1;start_range=.,1;transl_table=11 NZ_JJLR01000120.1 RefSeq pseudogene 318 674 . + . ID=gene-AC57_RS07625;Name=agaB;end_range=674,.;gbkey=Gene;gene=agaB;gene_biotype=pseudogene;locus_tag=AC57_RS07625;old_locus_tag=AC57_3470;partial=true;pseudo=true NZ_JJLR01000120.1 Protein Homology CDS 318 674 . + 0 ID=cds-AC57_RS07625;Parent=gene-AC57_RS07625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=674,.;gbkey=CDS;gene=agaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312045.1;locus_tag=AC57_RS07625;partial=true;product=PTS galactosamine transporter subunit IIB;pseudo=true;transl_table=11 NZ_JJLR01000120.1 RefSeq gene 692 953 . - . ID=gene-AC57_RS07620;Name=AC57_RS07620;end_range=953,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07620;old_locus_tag=AC57_3471;partial=true NZ_JJLR01000120.1 Protein Homology CDS 692 953 . - 1 ID=cds-WP_000317683.1-4;Parent=gene-AC57_RS07620;Dbxref=GenBank:WP_000317683.1;Name=WP_000317683.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=953,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07620;partial=true;product=IS1 family transposase;protein_id=WP_000317683.1;transl_table=11 ##sequence-region NZ_JJLR01000121.1 1 1698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000121.1 RefSeq region 1 1698 . + . ID=NZ_JJLR01000121.1:1..1698;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000121.1 RefSeq gene 1 225 . - . ID=gene-AC57_RS0125015;Name=AC57_RS0125015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125015;old_locus_tag=AC57_3472;partial=true;start_range=.,1 NZ_JJLR01000121.1 Protein Homology CDS 1 225 . - 0 ID=cds-WP_001482752.1-3;Parent=gene-AC57_RS0125015;Dbxref=GenBank:WP_001482752.1;Name=WP_001482752.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0125015;partial=true;product=IS1 family transposase;protein_id=WP_001482752.1;start_range=.,1;transl_table=11 NZ_JJLR01000121.1 RefSeq pseudogene 281 406 . + . ID=gene-AC57_RS27760;Name=AC57_RS27760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27760;partial=true;pseudo=true;start_range=.,281 NZ_JJLR01000121.1 Protein Homology CDS 281 406 . + 0 ID=cds-AC57_RS27760;Parent=gene-AC57_RS27760;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake%3B involved in N-acetylgalactosamine transport%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312045.1;locus_tag=AC57_RS27760;partial=true;product=PTS galactosamine transporter subunit IIB;pseudo=true;start_range=.,281;transl_table=11 NZ_JJLR01000121.1 RefSeq gene 445 1248 . + . ID=gene-AC57_RS07615;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;locus_tag=AC57_RS07615;old_locus_tag=AC57_3473 NZ_JJLR01000121.1 Protein Homology CDS 445 1248 . + 0 ID=cds-WP_000544489.1;Parent=gene-AC57_RS07615;Dbxref=GenBank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;gene=agaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=AC57_RS07615;product=PTS galactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11 NZ_JJLR01000121.1 RefSeq pseudogene 1238 1447 . + . ID=gene-AC57_RS0125020;Name=AC57_RS0125020;end_range=1447,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125020;partial=true;pseudo=true NZ_JJLR01000121.1 Protein Homology CDS 1238 1447 . + 0 ID=cds-AC57_RS0125020;Parent=gene-AC57_RS0125020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009401,GO:0016020;end_range=1447,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417609.1;locus_tag=AC57_RS0125020;partial=true;product=PTS system mannose/fructose/sorbose family transporter subunit IID;pseudo=true;transl_table=11 NZ_JJLR01000121.1 RefSeq gene 1463 1698 . - . ID=gene-AC57_RS27765;Name=AC57_RS27765;end_range=1698,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27765;old_locus_tag=AC57_3474;partial=true NZ_JJLR01000121.1 Protein Homology CDS 1463 1698 . - 2 ID=cds-WP_001393844.1-2;Parent=gene-AC57_RS27765;Dbxref=GenBank:WP_001393844.1;Name=WP_001393844.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1698,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27765;partial=true;product=IS1 family transposase;protein_id=WP_001393844.1;transl_table=11 ##sequence-region NZ_JJLR01000122.1 1 2756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000122.1 RefSeq region 1 2756 . + . ID=NZ_JJLR01000122.1:1..2756;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000122.1 RefSeq pseudogene 1 288 . - . ID=gene-AC57_RS0125025;Name=AC57_RS0125025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125025;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000122.1 Protein Homology CDS 1 288 . - 0 ID=cds-AC57_RS0125025;Parent=gene-AC57_RS0125025;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0125025;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000122.1 RefSeq pseudogene 339 743 . + . ID=gene-AC57_RS07610;Name=AC57_RS07610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS07610;old_locus_tag=AC57_3476;partial=true;pseudo=true;start_range=.,339 NZ_JJLR01000122.1 Protein Homology CDS 339 743 . + 0 ID=cds-AC57_RS07610;Parent=gene-AC57_RS07610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312047.1;locus_tag=AC57_RS07610;partial=true;product=fimbrial protein;pseudo=true;start_range=.,339;transl_table=11 NZ_JJLR01000122.1 RefSeq gene 823 1518 . + . ID=gene-AC57_RS07605;Name=yraI;gbkey=Gene;gene=yraI;gene_biotype=protein_coding;locus_tag=AC57_RS07605;old_locus_tag=AC57_3477 NZ_JJLR01000122.1 Protein Homology CDS 823 1518 . + 0 ID=cds-WP_000044775.1;Parent=gene-AC57_RS07605;Dbxref=GenBank:WP_000044775.1;Name=WP_000044775.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=yraI;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417612.1;locus_tag=AC57_RS07605;product=fimbrial biogenesis chaperone;protein_id=WP_000044775.1;transl_table=11 NZ_JJLR01000122.1 RefSeq pseudogene 1547 2458 . + . ID=gene-AC57_RS07600;Name=AC57_RS07600;end_range=2458,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS07600;old_locus_tag=AC57_3478;partial=true;pseudo=true NZ_JJLR01000122.1 Protein Homology CDS 1547 2458 . + 0 ID=cds-AC57_RS07600;Parent=gene-AC57_RS07600;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005515;end_range=2458,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417613.1;locus_tag=AC57_RS07600;partial=true;product=FimD/PapC N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000122.1 RefSeq gene 2498 2756 . + . ID=gene-AC57_RS07595;Name=AC57_RS07595;end_range=2756,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07595;old_locus_tag=AC57_3479;partial=true NZ_JJLR01000122.1 Protein Homology CDS 2498 2756 . + 0 ID=cds-WP_001483558.1;Parent=gene-AC57_RS07595;Dbxref=GenBank:WP_001483558.1;Name=WP_001483558.1;end_range=2756,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07595;partial=true;product=IS1-like element transposase;protein_id=WP_001483558.1;transl_table=11 ##sequence-region NZ_JJLR01000123.1 1 76985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000123.1 RefSeq region 1 76985 . + . ID=NZ_JJLR01000123.1:1..76985;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000123.1 RefSeq pseudogene 1 316 . + . ID=gene-AC57_RS07590;Name=AC57_RS07590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS07590;old_locus_tag=AC57_3480;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000123.1 Protein Homology CDS 1 316 . + 1 ID=cds-AC57_RS07590;Parent=gene-AC57_RS07590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07590;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000123.1 RefSeq pseudogene 333 1961 . + . ID=gene-AC57_RS07585;Name=AC57_RS07585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS07585;old_locus_tag=AC57_3481;partial=true;pseudo=true;start_range=.,333 NZ_JJLR01000123.1 Protein Homology CDS 333 1961 . + 0 ID=cds-AC57_RS07585;Parent=gene-AC57_RS07585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417613.1;locus_tag=AC57_RS07585;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;start_range=.,333;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 1972 3063 . + . ID=gene-AC57_RS07580;Name=yraK;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;locus_tag=AC57_RS07580;old_locus_tag=AC57_3482 NZ_JJLR01000123.1 Protein Homology CDS 1972 3063 . + 0 ID=cds-WP_000816992.1;Parent=gene-AC57_RS07580;Dbxref=GenBank:WP_000816992.1;Name=WP_000816992.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yraK;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417614.1;locus_tag=AC57_RS07580;product=fimbrial protein;protein_id=WP_000816992.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 3106 3966 . - . ID=gene-AC57_RS07575;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AC57_RS07575;old_locus_tag=AC57_3483 NZ_JJLR01000123.1 Protein Homology CDS 3106 3966 . - 0 ID=cds-WP_000809262.1;Parent=gene-AC57_RS07575;Dbxref=GenBank:WP_000809262.1;Name=WP_000809262.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312054.1;locus_tag=AC57_RS07575;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_000809262.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 4031 6067 . + . ID=gene-AC57_RS07570;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AC57_RS07570;old_locus_tag=AC57_3484 NZ_JJLR01000123.1 Protein Homology CDS 4031 6067 . + 0 ID=cds-WP_000249104.1;Parent=gene-AC57_RS07570;Dbxref=GenBank:WP_000249104.1;Name=WP_000249104.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417616.1;locus_tag=AC57_RS07570;product=penicillin-binding protein activator LpoA;protein_id=WP_000249104.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 6025 6420 . + . ID=gene-AC57_RS07565;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AC57_RS07565;old_locus_tag=AC57_3485 NZ_JJLR01000123.1 Protein Homology CDS 6025 6420 . + 0 ID=cds-WP_000246830.1;Parent=gene-AC57_RS07565;Dbxref=GenBank:WP_000246830.1;Name=WP_000246830.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417617.1;locus_tag=AC57_RS07565;product=YraN family protein;protein_id=WP_000246830.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 6440 7030 . + . ID=gene-AC57_RS07560;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AC57_RS07560;old_locus_tag=AC57_3486 NZ_JJLR01000123.1 Protein Homology CDS 6440 7030 . + 0 ID=cds-WP_001158034.1;Parent=gene-AC57_RS07560;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AC57_RS07560;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 7040 7615 . + . ID=gene-AC57_RS07555;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AC57_RS07555;old_locus_tag=AC57_3487 NZ_JJLR01000123.1 Protein Homology CDS 7040 7615 . + 0 ID=cds-WP_000646033.1;Parent=gene-AC57_RS07555;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AC57_RS07555;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 7729 8769 . - . ID=gene-AC57_RS07550;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AC57_RS07550;old_locus_tag=AC57_3488 NZ_JJLR01000123.1 Protein Homology CDS 7729 8769 . - 0 ID=cds-WP_032285731.1;Parent=gene-AC57_RS07550;Dbxref=GenBank:WP_032285731.1;Name=WP_032285731.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708952.1;locus_tag=AC57_RS07550;product=permease;protein_id=WP_032285731.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 8842 9477 . - . ID=gene-AC57_RS07545;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AC57_RS07545;old_locus_tag=AC57_3489 NZ_JJLR01000123.1 Protein Homology CDS 8842 9477 . - 0 ID=cds-WP_001301320.1;Parent=gene-AC57_RS07545;Dbxref=GenBank:WP_001301320.1;Name=WP_001301320.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=AC57_RS07545;product=NAD(P)H-binding protein;protein_id=WP_001301320.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 9605 10123 . + . ID=gene-AC57_RS07540;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AC57_RS07540;old_locus_tag=AC57_3490 NZ_JJLR01000123.1 Protein Homology CDS 9605 10123 . + 0 ID=cds-WP_000037608.1;Parent=gene-AC57_RS07540;Dbxref=GenBank:WP_000037608.1;Name=WP_000037608.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AC57_RS07540;product=protein/nucleic acid deglycase;protein_id=WP_000037608.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 10103 10546 . - . ID=gene-AC57_RS07535;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AC57_RS07535;old_locus_tag=AC57_3491 NZ_JJLR01000123.1 Protein Homology CDS 10103 10546 . - 0 ID=cds-WP_000449030.1;Parent=gene-AC57_RS07535;Dbxref=GenBank:WP_000449030.1;Name=WP_000449030.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=AC57_RS07535;product=YhbP family protein;protein_id=WP_000449030.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 10597 10899 . + . ID=gene-AC57_RS07530;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AC57_RS07530;old_locus_tag=AC57_3492 NZ_JJLR01000123.1 Protein Homology CDS 10597 10899 . + 0 ID=cds-WP_000189333.1;Parent=gene-AC57_RS07530;Dbxref=GenBank:WP_000189333.1;Name=WP_000189333.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417624.1;locus_tag=AC57_RS07530;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189333.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 10886 11389 . - . ID=gene-AC57_RS07525;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AC57_RS07525;old_locus_tag=AC57_3493 NZ_JJLR01000123.1 Protein Homology CDS 10886 11389 . - 0 ID=cds-WP_000908554.1;Parent=gene-AC57_RS07525;Dbxref=GenBank:WP_000908554.1;Name=WP_000908554.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AC57_RS07525;product=GNAT family N-acetyltransferase;protein_id=WP_000908554.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 11383 11907 . - . ID=gene-AC57_RS07520;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AC57_RS07520;old_locus_tag=AC57_3494 NZ_JJLR01000123.1 Protein Homology CDS 11383 11907 . - 0 ID=cds-WP_001295552.1;Parent=gene-AC57_RS07520;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AC57_RS07520;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 12116 13111 . + . ID=gene-AC57_RS07515;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AC57_RS07515;old_locus_tag=AC57_3496 NZ_JJLR01000123.1 Protein Homology CDS 12116 13111 . + 0 ID=cds-WP_001311152.1;Parent=gene-AC57_RS07515;Dbxref=GenBank:WP_001311152.1;Name=WP_001311152.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AC57_RS07515;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_001311152.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 13120 13998 . + . ID=gene-AC57_RS07510;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AC57_RS07510;old_locus_tag=AC57_3497 NZ_JJLR01000123.1 Protein Homology CDS 13120 13998 . + 0 ID=cds-WP_001301318.1;Parent=gene-AC57_RS07510;Dbxref=GenBank:WP_001301318.1;Name=WP_001301318.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417628.2;locus_tag=AC57_RS07510;product=U32 family peptidase;protein_id=WP_001301318.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 14079 15086 . + . ID=gene-AC57_RS07505;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AC57_RS07505;old_locus_tag=AC57_3498 NZ_JJLR01000123.1 Protein Homology CDS 14079 15086 . + 0 ID=cds-WP_032279584.1;Parent=gene-AC57_RS07505;Dbxref=GenBank:WP_032279584.1;Name=WP_032279584.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AC57_RS07505;product=luciferase-like monooxygenase;protein_id=WP_032279584.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 15204 16448 . - . ID=gene-AC57_RS07500;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=AC57_RS07500;old_locus_tag=AC57_3499 NZ_JJLR01000123.1 Protein Homology CDS 15204 16448 . - 0 ID=cds-WP_000224351.1;Parent=gene-AC57_RS07500;Dbxref=GenBank:WP_000224351.1;Name=WP_000224351.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417630.1;locus_tag=AC57_RS07500;product=tryptophan permease;protein_id=WP_000224351.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 16602 18491 . - . ID=gene-AC57_RS07490;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AC57_RS07490;old_locus_tag=AC57_3501 NZ_JJLR01000123.1 Protein Homology CDS 16602 18491 . - 0 ID=cds-WP_001295553.1;Parent=gene-AC57_RS07490;Dbxref=GenBank:WP_001295553.1;Name=WP_001295553.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417631.2;locus_tag=AC57_RS07490;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001295553.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 18484 18564 . - . ID=gene-AC57_RS29295;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AC57_RS29295 NZ_JJLR01000123.1 Protein Homology CDS 18484 18564 . - 0 ID=cds-WP_010723222.1;Parent=gene-AC57_RS29295;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AC57_RS29295;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 18671 19555 . - . ID=gene-AC57_RS07485;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AC57_RS07485;old_locus_tag=AC57_3502 NZ_JJLR01000123.1 Protein Homology CDS 18671 19555 . - 0 ID=cds-WP_000802080.1;Parent=gene-AC57_RS07485;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AC57_RS07485;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 19664 21799 . - . ID=gene-AC57_RS07480;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AC57_RS07480;old_locus_tag=AC57_3503 NZ_JJLR01000123.1 Protein Homology CDS 19664 21799 . - 0 ID=cds-WP_001295554.1;Parent=gene-AC57_RS07480;Dbxref=GenBank:WP_001295554.1;Name=WP_001295554.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417633.4;locus_tag=AC57_RS07480;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001295554.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 22046 22315 . - . ID=gene-AC57_RS07475;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AC57_RS07475;old_locus_tag=AC57_3504 NZ_JJLR01000123.1 Protein Homology CDS 22046 22315 . - 0 ID=cds-WP_000059466.1;Parent=gene-AC57_RS07475;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AC57_RS07475;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 22464 23408 . - . ID=gene-AC57_RS07470;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AC57_RS07470;old_locus_tag=AC57_3505 NZ_JJLR01000123.1 Protein Homology CDS 22464 23408 . - 0 ID=cds-WP_000089698.1;Parent=gene-AC57_RS07470;Dbxref=GenBank:WP_000089698.1;Name=WP_000089698.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AC57_RS07470;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_000089698.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 23408 23809 . - . ID=gene-AC57_RS07465;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AC57_RS07465;old_locus_tag=AC57_3506 NZ_JJLR01000123.1 Protein Homology CDS 23408 23809 . - 0 ID=cds-WP_001040205.1;Parent=gene-AC57_RS07465;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AC57_RS07465;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 23973 26645 . - . ID=gene-AC57_RS07460;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AC57_RS07460;old_locus_tag=AC57_3507 NZ_JJLR01000123.1 Protein Homology CDS 23973 26645 . - 0 ID=cds-WP_000133044.1;Parent=gene-AC57_RS07460;Dbxref=GenBank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AC57_RS07460;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 26670 28157 . - . ID=gene-AC57_RS07455;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AC57_RS07455;old_locus_tag=AC57_3508 NZ_JJLR01000123.1 Protein Homology CDS 26670 28157 . - 0 ID=cds-WP_001031057.1;Parent=gene-AC57_RS07455;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AC57_RS07455;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 28185 28637 . - . ID=gene-AC57_RS07450;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AC57_RS07450;old_locus_tag=AC57_3509 NZ_JJLR01000123.1 Protein Homology CDS 28185 28637 . - 0 ID=cds-WP_001300397.1;Parent=gene-AC57_RS07450;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AC57_RS07450;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 28844 28920 . - . ID=gene-AC57_RS07445;Name=AC57_RS07445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS07445;old_locus_tag=AC57_3510 NZ_JJLR01000123.1 tRNAscan-SE tRNA 28844 28920 . - . ID=rna-AC57_RS07445;Parent=gene-AC57_RS07445;anticodon=(pos:complement(28884..28886));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS07445;product=tRNA-Met NZ_JJLR01000123.1 tRNAscan-SE exon 28844 28920 . - . ID=exon-AC57_RS07445-1;Parent=rna-AC57_RS07445;anticodon=(pos:complement(28884..28886));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS07445;product=tRNA-Met NZ_JJLR01000123.1 RefSeq gene 29268 30611 . + . ID=gene-AC57_RS07440;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AC57_RS07440;old_locus_tag=AC57_3511 NZ_JJLR01000123.1 Protein Homology CDS 29268 30611 . + 0 ID=cds-WP_000207680.1;Parent=gene-AC57_RS07440;Dbxref=GenBank:WP_000207680.1;Name=WP_000207680.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AC57_RS07440;product=argininosuccinate synthase;protein_id=WP_000207680.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 30619 32244 . - . ID=gene-AC57_RS07435;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AC57_RS07435;old_locus_tag=AC57_3512 NZ_JJLR01000123.1 Protein Homology CDS 30619 32244 . - 0 ID=cds-WP_077756454.1;Parent=gene-AC57_RS07435;Dbxref=GenBank:WP_077756454.1;Name=WP_077756454.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AC57_RS07435;product=phosphoethanolamine transferase;protein_id=WP_077756454.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 32703 32789 . - . ID=gene-AC57_RS07430;Name=AC57_RS07430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS07430;old_locus_tag=AC57_3513 NZ_JJLR01000123.1 tRNAscan-SE tRNA 32703 32789 . - . ID=rna-AC57_RS07430;Parent=gene-AC57_RS07430;anticodon=(pos:complement(32753..32755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS07430;product=tRNA-Leu NZ_JJLR01000123.1 tRNAscan-SE exon 32703 32789 . - . ID=exon-AC57_RS07430-1;Parent=rna-AC57_RS07430;anticodon=(pos:complement(32753..32755));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS07430;product=tRNA-Leu NZ_JJLR01000123.1 RefSeq gene 32804 33136 . - . ID=gene-AC57_RS07425;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AC57_RS07425;old_locus_tag=AC57_3514 NZ_JJLR01000123.1 Protein Homology CDS 32804 33136 . - 0 ID=cds-WP_001297427.1;Parent=gene-AC57_RS07425;Dbxref=GenBank:WP_001297427.1;Name=WP_001297427.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AC57_RS07425;product=preprotein translocase subunit SecG;protein_id=WP_001297427.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 33364 34701 . - . ID=gene-AC57_RS07420;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AC57_RS07420;old_locus_tag=AC57_3515 NZ_JJLR01000123.1 Protein Homology CDS 33364 34701 . - 0 ID=cds-WP_000071134.1;Parent=gene-AC57_RS07420;Dbxref=GenBank:WP_000071134.1;Name=WP_000071134.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417643.1;locus_tag=AC57_RS07420;product=phosphoglucosamine mutase;protein_id=WP_000071134.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 34694 35542 . - . ID=gene-AC57_RS07415;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AC57_RS07415;old_locus_tag=AC57_3516 NZ_JJLR01000123.1 Protein Homology CDS 34694 35542 . - 0 ID=cds-WP_000764731.1;Parent=gene-AC57_RS07415;Dbxref=GenBank:WP_000764731.1;Name=WP_000764731.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AC57_RS07415;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 35632 37566 . - . ID=gene-AC57_RS07410;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AC57_RS07410;old_locus_tag=AC57_3517 NZ_JJLR01000123.1 Protein Homology CDS 35632 37566 . - 0 ID=cds-WP_001107467.1;Parent=gene-AC57_RS07410;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AC57_RS07410;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 37666 38295 . - . ID=gene-AC57_RS07405;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AC57_RS07405;old_locus_tag=AC57_3518 NZ_JJLR01000123.1 Protein Homology CDS 37666 38295 . - 0 ID=cds-WP_000145975.1;Parent=gene-AC57_RS07405;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AC57_RS07405;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 38421 38714 . + . ID=gene-AC57_RS07400;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AC57_RS07400;old_locus_tag=AC57_3519 NZ_JJLR01000123.1 Protein Homology CDS 38421 38714 . + 0 ID=cds-WP_001054420.1;Parent=gene-AC57_RS07400;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AC57_RS07400;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 38870 39346 . - . ID=gene-AC57_RS07395;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AC57_RS07395;old_locus_tag=AC57_3520 NZ_JJLR01000123.1 Protein Homology CDS 38870 39346 . - 0 ID=cds-WP_032279582.1;Parent=gene-AC57_RS07395;Dbxref=GenBank:WP_032279582.1;Name=WP_032279582.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AC57_RS07395;product=transcription elongation factor GreA;protein_id=WP_032279582.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 39594 41027 . + . ID=gene-AC57_RS07390;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AC57_RS07390;old_locus_tag=AC57_3521 NZ_JJLR01000123.1 Protein Homology CDS 39594 41027 . + 0 ID=cds-WP_001212619.1;Parent=gene-AC57_RS07390;Dbxref=GenBank:WP_001212619.1;Name=WP_001212619.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AC57_RS07390;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_001212619.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 41213 42385 . - . ID=gene-AC57_RS07385;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AC57_RS07385;old_locus_tag=AC57_3522 NZ_JJLR01000123.1 Protein Homology CDS 41213 42385 . - 0 ID=cds-WP_000673572.1;Parent=gene-AC57_RS07385;Dbxref=GenBank:WP_000673572.1;Name=WP_000673572.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312089.1;locus_tag=AC57_RS07385;product=Obg family GTPase CgtA;protein_id=WP_000673572.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 42401 43366 . - . ID=gene-AC57_RS07380;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AC57_RS07380;old_locus_tag=AC57_3523 NZ_JJLR01000123.1 Protein Homology CDS 42401 43366 . - 0 ID=cds-WP_000813037.1;Parent=gene-AC57_RS07380;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AC57_RS07380;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 43493 43750 . - . ID=gene-AC57_RS07375;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AC57_RS07375;old_locus_tag=AC57_3524 NZ_JJLR01000123.1 Protein Homology CDS 43493 43750 . - 0 ID=cds-WP_000940595.1;Parent=gene-AC57_RS07375;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AC57_RS07375;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 43771 44082 . - . ID=gene-AC57_RS07370;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AC57_RS07370;old_locus_tag=AC57_3525 NZ_JJLR01000123.1 Protein Homology CDS 43771 44082 . - 0 ID=cds-WP_000271401.1;Parent=gene-AC57_RS07370;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AC57_RS07370;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 44341 45312 . + . ID=gene-AC57_RS07365;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AC57_RS07365;old_locus_tag=AC57_3526 NZ_JJLR01000123.1 Protein Homology CDS 44341 45312 . + 0 ID=cds-WP_001047336.1;Parent=gene-AC57_RS07365;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AC57_RS07365;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 45541 45819 . + . ID=gene-AC57_RS07360;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AC57_RS07360;old_locus_tag=AC57_3527 NZ_JJLR01000123.1 Protein Homology CDS 45541 45819 . + 0 ID=cds-WP_000445413.1;Parent=gene-AC57_RS07360;Dbxref=GenBank:WP_000445413.1;Name=WP_000445413.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AC57_RS07360;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_000445413.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 45867 47126 . - . ID=gene-AC57_RS07355;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AC57_RS07355;old_locus_tag=AC57_3528 NZ_JJLR01000123.1 Protein Homology CDS 45867 47126 . - 0 ID=cds-WP_000357259.1;Parent=gene-AC57_RS07355;Dbxref=GenBank:WP_000357259.1;Name=WP_000357259.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AC57_RS07355;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_000357259.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 47181 47435 . - . ID=gene-AC57_RS07350;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AC57_RS07350;old_locus_tag=AC57_3529 NZ_JJLR01000123.1 Protein Homology CDS 47181 47435 . - 0 ID=cds-WP_000429656.1;Parent=gene-AC57_RS07350;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AC57_RS07350;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 47595 47888 . - . ID=gene-AC57_RS07345;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AC57_RS07345;old_locus_tag=AC57_3530 NZ_JJLR01000123.1 Protein Homology CDS 47595 47888 . - 0 ID=cds-WP_000004488.1;Parent=gene-AC57_RS07345;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AC57_RS07345;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 47888 48523 . - . ID=gene-AC57_RS07340;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AC57_RS07340;old_locus_tag=AC57_3531 NZ_JJLR01000123.1 Protein Homology CDS 47888 48523 . - 0 ID=cds-WP_000476487.1;Parent=gene-AC57_RS07340;Dbxref=GenBank:WP_000476487.1;Name=WP_000476487.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417659.1;locus_tag=AC57_RS07340;product=phospholipid-binding protein MlaC;protein_id=WP_000476487.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 48542 49093 . - . ID=gene-AC57_RS07335;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AC57_RS07335;old_locus_tag=AC57_3532 NZ_JJLR01000123.1 Protein Homology CDS 48542 49093 . - 0 ID=cds-WP_001296448.1;Parent=gene-AC57_RS07335;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AC57_RS07335;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 49098 49880 . - . ID=gene-AC57_RS07330;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AC57_RS07330;old_locus_tag=AC57_3533 NZ_JJLR01000123.1 Protein Homology CDS 49098 49880 . - 0 ID=cds-WP_000925795.1;Parent=gene-AC57_RS07330;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AC57_RS07330;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 49888 50697 . - . ID=gene-AC57_RS07325;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AC57_RS07325;old_locus_tag=AC57_3534 NZ_JJLR01000123.1 Protein Homology CDS 49888 50697 . - 0 ID=cds-WP_000438245.1;Parent=gene-AC57_RS07325;Dbxref=GenBank:WP_000438245.1;Name=WP_000438245.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AC57_RS07325;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438245.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 50907 51884 . + . ID=gene-AC57_RS07320;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AC57_RS07320;old_locus_tag=AC57_3535 NZ_JJLR01000123.1 Protein Homology CDS 50907 51884 . + 0 ID=cds-WP_000922901.1;Parent=gene-AC57_RS07320;Dbxref=GenBank:WP_000922901.1;Name=WP_000922901.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417663.1;locus_tag=AC57_RS07320;product=calcium/sodium antiporter;protein_id=WP_000922901.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 51898 52884 . + . ID=gene-AC57_RS07315;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AC57_RS07315;old_locus_tag=AC57_3536 NZ_JJLR01000123.1 Protein Homology CDS 51898 52884 . + 0 ID=cds-WP_032237350.1;Parent=gene-AC57_RS07315;Dbxref=GenBank:WP_032237350.1;Name=WP_032237350.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AC57_RS07315;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_032237350.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 52905 53471 . + . ID=gene-AC57_RS07310;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AC57_RS07310;old_locus_tag=AC57_3537 NZ_JJLR01000123.1 Protein Homology CDS 52905 53471 . + 0 ID=cds-WP_000030005.1;Parent=gene-AC57_RS07310;Dbxref=GenBank:WP_000030005.1;Name=WP_000030005.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312104.1;locus_tag=AC57_RS07310;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030005.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 53468 54043 . + . ID=gene-AC57_RS07305;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AC57_RS07305;old_locus_tag=AC57_3538 NZ_JJLR01000123.1 Protein Homology CDS 53468 54043 . + 0 ID=cds-WP_000030537.1;Parent=gene-AC57_RS07305;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AC57_RS07305;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 54012 54569 . + . ID=gene-AC57_RS07300;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AC57_RS07300;old_locus_tag=AC57_3539 NZ_JJLR01000123.1 Protein Homology CDS 54012 54569 . + 0 ID=cds-WP_000669785.1;Parent=gene-AC57_RS07300;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AC57_RS07300;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 54576 55301 . + . ID=gene-AC57_RS07295;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AC57_RS07295;old_locus_tag=AC57_3540 NZ_JJLR01000123.1 Protein Homology CDS 54576 55301 . + 0 ID=cds-WP_000224099.1;Parent=gene-AC57_RS07295;Dbxref=GenBank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AC57_RS07295;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 55349 56782 . + . ID=gene-AC57_RS07290;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AC57_RS07290;old_locus_tag=AC57_3541 NZ_JJLR01000123.1 Protein Homology CDS 55349 56782 . + 0 ID=cds-WP_032237351.1;Parent=gene-AC57_RS07290;Dbxref=GenBank:WP_032237351.1;Name=WP_032237351.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417669.1;locus_tag=AC57_RS07290;product=RNA polymerase factor sigma-54;protein_id=WP_032237351.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 56805 57092 . + . ID=gene-AC57_RS07285;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AC57_RS07285;old_locus_tag=AC57_3542 NZ_JJLR01000123.1 Protein Homology CDS 56805 57092 . + 0 ID=cds-WP_001176599.1;Parent=gene-AC57_RS07285;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AC57_RS07285;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 57210 57701 . + . ID=gene-AC57_RS07280;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AC57_RS07280;old_locus_tag=AC57_3543 NZ_JJLR01000123.1 Protein Homology CDS 57210 57701 . + 0 ID=cds-WP_000183676.1;Parent=gene-AC57_RS07280;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AC57_RS07280;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 57747 58601 . + . ID=gene-AC57_RS07275;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AC57_RS07275;old_locus_tag=AC57_3544 NZ_JJLR01000123.1 Protein Homology CDS 57747 58601 . + 0 ID=cds-WP_000243741.1;Parent=gene-AC57_RS07275;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AC57_RS07275;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 58598 58870 . + . ID=gene-AC57_RS07270;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AC57_RS07270;old_locus_tag=AC57_3545 NZ_JJLR01000123.1 Protein Homology CDS 58598 58870 . + 0 ID=cds-WP_000216791.1;Parent=gene-AC57_RS07270;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AC57_RS07270;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 59084 59716 . + . ID=gene-AC57_RS07265;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AC57_RS07265;old_locus_tag=AC57_3546 NZ_JJLR01000123.1 Protein Homology CDS 59084 59716 . + 0 ID=cds-WP_000620405.1;Parent=gene-AC57_RS07265;Dbxref=GenBank:WP_000620405.1;Name=WP_000620405.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417674.1;locus_tag=AC57_RS07265;product=PhoP regulatory network protein YrbL;protein_id=WP_000620405.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 59713 60441 . - . ID=gene-AC57_RS07260;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AC57_RS07260;old_locus_tag=AC57_3547 NZ_JJLR01000123.1 Protein Homology CDS 59713 60441 . - 0 ID=cds-WP_032279579.1;Parent=gene-AC57_RS07260;Dbxref=GenBank:WP_032279579.1;Name=WP_032279579.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AC57_RS07260;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_032279579.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 60438 61091 . - . ID=gene-AC57_RS07255;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AC57_RS07255;old_locus_tag=AC57_3548 NZ_JJLR01000123.1 Protein Homology CDS 60438 61091 . - 0 ID=cds-WP_001300411.1;Parent=gene-AC57_RS07255;Dbxref=GenBank:WP_001300411.1;Name=WP_001300411.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AC57_RS07255;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_001300411.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 61321 63657 . - . ID=gene-AC57_RS07250;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AC57_RS07250;old_locus_tag=AC57_3549 NZ_JJLR01000123.1 Protein Homology CDS 61321 63657 . - 0 ID=cds-WP_000809774.1;Parent=gene-AC57_RS07250;Dbxref=GenBank:WP_000809774.1;Name=WP_000809774.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AC57_RS07250;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_000809774.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 63753 64682 . - . ID=gene-AC57_RS07245;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AC57_RS07245;old_locus_tag=AC57_3550 NZ_JJLR01000123.1 Protein Homology CDS 63753 64682 . - 0 ID=cds-WP_032279588.1;Parent=gene-AC57_RS07245;Dbxref=GenBank:WP_032279588.1;Name=WP_032279588.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AC57_RS07245;product=TIGR01212 family radical SAM protein;protein_id=WP_032279588.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 65357 69817 . + . ID=gene-AC57_RS07240;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AC57_RS07240;old_locus_tag=AC57_3551 NZ_JJLR01000123.1 Protein Homology CDS 65357 69817 . + 0 ID=cds-WP_032285732.1;Parent=gene-AC57_RS07240;Dbxref=GenBank:WP_032285732.1;Name=WP_032285732.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AC57_RS07240;product=glutamate synthase large subunit;protein_id=WP_032285732.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 69830 71248 . + . ID=gene-AC57_RS07235;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AC57_RS07235;old_locus_tag=AC57_3552 NZ_JJLR01000123.1 Protein Homology CDS 69830 71248 . + 0 ID=cds-WP_000081674.1;Parent=gene-AC57_RS07235;Dbxref=GenBank:WP_000081674.1;Name=WP_000081674.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AC57_RS07235;product=glutamate synthase subunit GltD;protein_id=WP_000081674.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 71808 72572 . + . ID=gene-AC57_RS07230;Name=gltF;gbkey=Gene;gene=gltF;gene_biotype=protein_coding;locus_tag=AC57_RS07230;old_locus_tag=AC57_3553 NZ_JJLR01000123.1 Protein Homology CDS 71808 72572 . + 0 ID=cds-WP_000465371.1;Parent=gene-AC57_RS07230;Dbxref=GenBank:WP_000465371.1;Name=WP_000465371.1;gbkey=CDS;gene=gltF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417681.1;locus_tag=AC57_RS07230;product=DUF1120 domain-containing protein;protein_id=WP_000465371.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 72744 73418 . + . ID=gene-AC57_RS07225;Name=yhcA;gbkey=Gene;gene=yhcA;gene_biotype=protein_coding;locus_tag=AC57_RS07225;old_locus_tag=AC57_3554 NZ_JJLR01000123.1 Protein Homology CDS 72744 73418 . + 0 ID=cds-WP_032237353.1;Parent=gene-AC57_RS07225;Dbxref=GenBank:WP_032237353.1;Name=WP_032237353.1;Ontology_term=GO:0061077;gbkey=CDS;gene=yhcA;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417682.1;locus_tag=AC57_RS07225;product=fimbria/pilus chaperone family protein;protein_id=WP_032237353.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 73439 75820 . + . ID=gene-AC57_RS07220;Name=yhcD;gbkey=Gene;gene=yhcD;gene_biotype=protein_coding;locus_tag=AC57_RS07220;old_locus_tag=AC57_3555 NZ_JJLR01000123.1 Protein Homology CDS 73439 75820 . + 0 ID=cds-WP_000914988.1;Parent=gene-AC57_RS07220;Dbxref=GenBank:WP_000914988.1;Name=WP_000914988.1;gbkey=CDS;gene=yhcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417683.1;locus_tag=AC57_RS07220;product=fimbrial biogenesis usher protein;protein_id=WP_000914988.1;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 75817 76362 . + . ID=gene-AC57_RS07215;Name=AC57_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07215;old_locus_tag=AC57_3556 NZ_JJLR01000123.1 Protein Homology CDS 75817 76362 . + 0 ID=cds-WP_000821351.1;Parent=gene-AC57_RS07215;Dbxref=GenBank:WP_000821351.1;Name=WP_000821351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000821351.1;locus_tag=AC57_RS07215;product=YhcE family protein;protein_id=WP_000821351.1;transl_table=11 NZ_JJLR01000123.1 RefSeq pseudogene 76359 76718 . + . ID=gene-AC57_RS0125030;Name=AC57_RS0125030;end_range=76718,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125030;partial=true;pseudo=true NZ_JJLR01000123.1 Protein Homology CDS 76359 76718 . + 0 ID=cds-AC57_RS0125030;Parent=gene-AC57_RS0125030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=76718,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417686.1;locus_tag=AC57_RS0125030;partial=true;product=DUF1120 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000123.1 RefSeq gene 76774 76985 . + . ID=gene-AC57_RS27790;Name=AC57_RS27790;end_range=76985,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27790;old_locus_tag=AC57_3558;partial=true NZ_JJLR01000123.1 Protein Homology CDS 76774 76985 . + 0 ID=cds-WP_000179205.1;Parent=gene-AC57_RS27790;Dbxref=GenBank:WP_000179205.1;Name=WP_000179205.1;Ontology_term=GO:0006313;end_range=76985,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27790;partial=true;product=IS1 family transposase;protein_id=WP_000179205.1;transl_table=11 ##sequence-region NZ_JJLR01000124.1 1 57263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000124.1 RefSeq region 1 57263 . + . ID=NZ_JJLR01000124.1:1..57263;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000124.1 RefSeq gene 1 256 . + . ID=gene-AC57_RS07210;Name=AC57_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS07210;old_locus_tag=AC57_3559;partial=true;start_range=.,1 NZ_JJLR01000124.1 Protein Homology CDS 1 256 . + 1 ID=cds-WP_000363925.1-6;Parent=gene-AC57_RS07210;Dbxref=GenBank:WP_000363925.1;Name=WP_000363925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS07210;partial=true;product=IS1 family transposase;protein_id=WP_000363925.1;start_range=.,1;transl_table=11 NZ_JJLR01000124.1 RefSeq pseudogene 260 637 . + . ID=gene-AC57_RS27795;Name=AC57_RS27795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS27795;old_locus_tag=AC57_3560;partial=true;pseudo=true;start_range=.,260 NZ_JJLR01000124.1 Protein Homology CDS 260 637 . + 0 ID=cds-AC57_RS27795;Parent=gene-AC57_RS27795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417686.1;locus_tag=AC57_RS27795;partial=true;product=DUF1120 domain-containing protein;pseudo=true;start_range=.,260;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 822 1871 . + . ID=gene-AC57_RS07205;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=AC57_RS07205;old_locus_tag=AC57_3561 NZ_JJLR01000124.1 Protein Homology CDS 822 1871 . + 0 ID=cds-WP_032237539.1;Parent=gene-AC57_RS07205;Dbxref=GenBank:WP_032237539.1;Name=WP_032237539.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;gene=yhcG;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417687.1;locus_tag=AC57_RS07205;product=PDDEXK nuclease domain-containing protein;protein_id=WP_032237539.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 1931 2395 . - . ID=gene-AC57_RS07200;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AC57_RS07200;old_locus_tag=AC57_3562 NZ_JJLR01000124.1 Protein Homology CDS 1931 2395 . - 0 ID=cds-WP_000979882.1;Parent=gene-AC57_RS07200;Dbxref=GenBank:WP_000979882.1;Name=WP_000979882.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417688.1;locus_tag=AC57_RS07200;product=N-acetylneuraminate anomerase;protein_id=WP_000979882.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 2392 3267 . - . ID=gene-AC57_RS07195;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AC57_RS07195;old_locus_tag=AC57_3563 NZ_JJLR01000124.1 Protein Homology CDS 2392 3267 . - 0 ID=cds-WP_000209011.1;Parent=gene-AC57_RS07195;Dbxref=GenBank:WP_000209011.1;Name=WP_000209011.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417689.4;locus_tag=AC57_RS07195;product=N-acetylmannosamine kinase;protein_id=WP_000209011.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 3264 3953 . - . ID=gene-AC57_RS07190;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=AC57_RS07190;old_locus_tag=AC57_3564 NZ_JJLR01000124.1 Protein Homology CDS 3264 3953 . - 0 ID=cds-WP_000054239.1;Parent=gene-AC57_RS07190;Dbxref=GenBank:WP_000054239.1;Name=WP_000054239.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417690.1;locus_tag=AC57_RS07190;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_000054239.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 4001 5491 . - . ID=gene-AC57_RS07185;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AC57_RS07185;old_locus_tag=AC57_3565 NZ_JJLR01000124.1 Protein Homology CDS 4001 5491 . - 0 ID=cds-WP_000108459.1;Parent=gene-AC57_RS07185;Dbxref=GenBank:WP_000108459.1;Name=WP_000108459.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AC57_RS07185;product=sialic acid transporter NanT;protein_id=WP_000108459.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 5601 6494 . - . ID=gene-AC57_RS07180;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AC57_RS07180;old_locus_tag=AC57_3566 NZ_JJLR01000124.1 Protein Homology CDS 5601 6494 . - 0 ID=cds-WP_000224714.1;Parent=gene-AC57_RS07180;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AC57_RS07180;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 6616 7407 . - . ID=gene-AC57_RS07175;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AC57_RS07175;old_locus_tag=AC57_3567 NZ_JJLR01000124.1 Protein Homology CDS 6616 7407 . - 0 ID=cds-WP_000523845.1;Parent=gene-AC57_RS07175;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AC57_RS07175;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 7787 9154 . + . ID=gene-AC57_RS07170;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC57_RS07170;old_locus_tag=AC57_3568 NZ_JJLR01000124.1 Protein Homology CDS 7787 9154 . + 0 ID=cds-WP_000466985.1;Parent=gene-AC57_RS07170;Dbxref=GenBank:WP_000466985.1;Name=WP_000466985.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AC57_RS07170;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000466985.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 9196 9693 . - . ID=gene-AC57_RS07165;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AC57_RS07165;old_locus_tag=AC57_3569 NZ_JJLR01000124.1 Protein Homology CDS 9196 9693 . - 0 ID=cds-WP_032237538.1;Parent=gene-AC57_RS07165;Dbxref=GenBank:WP_032237538.1;Name=WP_032237538.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AC57_RS07165;product=ClpXP protease specificity-enhancing factor;protein_id=WP_032237538.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 9699 10337 . - . ID=gene-AC57_RS07160;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AC57_RS07160;old_locus_tag=AC57_3570 NZ_JJLR01000124.1 Protein Homology CDS 9699 10337 . - 0 ID=cds-WP_000257293.1;Parent=gene-AC57_RS07160;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AC57_RS07160;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 10732 11124 . - . ID=gene-AC57_RS07155;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AC57_RS07155;old_locus_tag=AC57_3571 NZ_JJLR01000124.1 Protein Homology CDS 10732 11124 . - 0 ID=cds-WP_000829818.1;Parent=gene-AC57_RS07155;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AC57_RS07155;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 11140 11568 . - . ID=gene-AC57_RS07150;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AC57_RS07150;old_locus_tag=AC57_3572 NZ_JJLR01000124.1 Protein Homology CDS 11140 11568 . - 0 ID=cds-WP_000847559.1;Parent=gene-AC57_RS07150;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AC57_RS07150;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 11787 12914 . - . ID=gene-AC57_RS07145;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AC57_RS07145;old_locus_tag=AC57_3573 NZ_JJLR01000124.1 Protein Homology CDS 11787 12914 . - 0 ID=cds-WP_001190802.1;Parent=gene-AC57_RS07145;Dbxref=GenBank:WP_001190802.1;Name=WP_001190802.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709029.1;locus_tag=AC57_RS07145;product=cell division protein ZapE;protein_id=WP_001190802.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 13108 13506 . + . ID=gene-AC57_RS07140;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AC57_RS07140;old_locus_tag=AC57_3574 NZ_JJLR01000124.1 Protein Homology CDS 13108 13506 . + 0 ID=cds-WP_001295270.1;Parent=gene-AC57_RS07140;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AC57_RS07140;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 13660 15027 . + . ID=gene-AC57_RS07135;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AC57_RS07135;old_locus_tag=AC57_3575 NZ_JJLR01000124.1 Protein Homology CDS 13660 15027 . + 0 ID=cds-WP_001295271.1;Parent=gene-AC57_RS07135;Dbxref=GenBank:WP_001295271.1;Name=WP_001295271.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AC57_RS07135;product=serine endoprotease DegQ;protein_id=WP_001295271.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 15117 16184 . + . ID=gene-AC57_RS07130;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AC57_RS07130;old_locus_tag=AC57_3576 NZ_JJLR01000124.1 Protein Homology CDS 15117 16184 . + 0 ID=cds-WP_000497723.1;Parent=gene-AC57_RS07130;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AC57_RS07130;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 16247 17185 . - . ID=gene-AC57_RS07125;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AC57_RS07125;old_locus_tag=AC57_3577 NZ_JJLR01000124.1 Protein Homology CDS 16247 17185 . - 0 ID=cds-WP_001295272.1;Parent=gene-AC57_RS07125;Dbxref=GenBank:WP_001295272.1;Name=WP_001295272.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AC57_RS07125;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 17620 18090 . + . ID=gene-AC57_RS07120;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AC57_RS07120;old_locus_tag=AC57_3578 NZ_JJLR01000124.1 Protein Homology CDS 17620 18090 . + 0 ID=cds-WP_001257846.1;Parent=gene-AC57_RS07120;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AC57_RS07120;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 18455 18718 . + . ID=gene-AC57_RS07115;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AC57_RS07115;old_locus_tag=AC57_3579 NZ_JJLR01000124.1 Protein Homology CDS 18455 18718 . + 0 ID=cds-WP_000695690.1;Parent=gene-AC57_RS07115;Dbxref=GenBank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AC57_RS07115;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 18774 19046 . - . ID=gene-AC57_RS07110;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=AC57_RS07110;old_locus_tag=AC57_3580 NZ_JJLR01000124.1 Protein Homology CDS 18774 19046 . - 0 ID=cds-WP_001029013.1;Parent=gene-AC57_RS07110;Dbxref=GenBank:WP_001029013.1;Name=WP_001029013.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AC57_RS07110;product=barstar family protein;protein_id=WP_001029013.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 19138 21105 . - . ID=gene-AC57_RS07105;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AC57_RS07105;old_locus_tag=AC57_3581 NZ_JJLR01000124.1 Protein Homology CDS 19138 21105 . - 0 ID=cds-WP_000510962.1;Parent=gene-AC57_RS07105;Dbxref=GenBank:WP_000510962.1;Name=WP_000510962.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709037.1;locus_tag=AC57_RS07105;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510962.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 21111 22043 . - . ID=gene-AC57_RS07100;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AC57_RS07100;old_locus_tag=AC57_3582 NZ_JJLR01000124.1 Protein Homology CDS 21111 22043 . - 0 ID=cds-WP_000854033.1;Parent=gene-AC57_RS07100;Dbxref=GenBank:WP_000854033.1;Name=WP_000854033.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AC57_RS07100;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854033.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 22051 22254 . - . ID=gene-AC57_RS07095;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AC57_RS07095;old_locus_tag=AC57_3583 NZ_JJLR01000124.1 Protein Homology CDS 22051 22254 . - 0 ID=cds-WP_000051841.1;Parent=gene-AC57_RS07095;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AC57_RS07095;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 22437 23366 . + . ID=gene-AC57_RS07090;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AC57_RS07090;old_locus_tag=AC57_3584 NZ_JJLR01000124.1 Protein Homology CDS 22437 23366 . + 0 ID=cds-WP_000440317.1;Parent=gene-AC57_RS07090;Dbxref=GenBank:WP_000440317.1;Name=WP_000440317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AC57_RS07090;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 23500 24945 . - . ID=gene-AC57_RS07085;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AC57_RS07085;old_locus_tag=AC57_3585 NZ_JJLR01000124.1 Protein Homology CDS 23500 24945 . - 0 ID=cds-WP_000055909.1;Parent=gene-AC57_RS07085;Dbxref=GenBank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AC57_RS07085;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 25648 29448 . - . ID=gene-AC57_RS07080;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AC57_RS07080;old_locus_tag=AC57_3586 NZ_JJLR01000124.1 Protein Homology CDS 25648 29448 . - 0 ID=cds-WP_001253626.1;Parent=gene-AC57_RS07080;Dbxref=GenBank:WP_001253626.1;Name=WP_001253626.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AC57_RS07080;product=AsmA2 domain-containing protein YhdP;protein_id=WP_001253626.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 29516 30985 . - . ID=gene-AC57_RS07075;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AC57_RS07075;old_locus_tag=AC57_3587 NZ_JJLR01000124.1 Protein Homology CDS 29516 30985 . - 0 ID=cds-WP_000123197.1;Parent=gene-AC57_RS07075;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AC57_RS07075;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 30975 31568 . - . ID=gene-AC57_RS07070;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AC57_RS07070;old_locus_tag=AC57_3588 NZ_JJLR01000124.1 Protein Homology CDS 30975 31568 . - 0 ID=cds-WP_000203096.1;Parent=gene-AC57_RS07070;Dbxref=GenBank:WP_000203096.1;Name=WP_000203096.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709043.1;locus_tag=AC57_RS07070;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_000203096.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 31577 32065 . - . ID=gene-AC57_RS07065;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AC57_RS07065;old_locus_tag=AC57_3589 NZ_JJLR01000124.1 Protein Homology CDS 31577 32065 . - 0 ID=cds-WP_000179409.1;Parent=gene-AC57_RS07065;Dbxref=GenBank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AC57_RS07065;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 32065 33168 . - . ID=gene-AC57_RS07060;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AC57_RS07060;old_locus_tag=AC57_3590 NZ_JJLR01000124.1 Protein Homology CDS 32065 33168 . - 0 ID=cds-WP_000802516.1;Parent=gene-AC57_RS07060;Dbxref=GenBank:WP_000802516.1;Name=WP_000802516.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312149.1;locus_tag=AC57_RS07060;product=rod shape-determining protein MreC;protein_id=WP_000802516.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 33234 34277 . - . ID=gene-AC57_RS07055;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AC57_RS07055;old_locus_tag=AC57_3591 NZ_JJLR01000124.1 Protein Homology CDS 33234 34277 . - 0 ID=cds-WP_000913396.1;Parent=gene-AC57_RS07055;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AC57_RS07055;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 34582 36522 . - . ID=gene-AC57_RS07050;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AC57_RS07050;old_locus_tag=AC57_3592 NZ_JJLR01000124.1 Protein Homology CDS 34582 36522 . - 0 ID=cds-WP_001241469.1;Parent=gene-AC57_RS07050;Dbxref=GenBank:WP_001241469.1;Name=WP_001241469.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417718.1;locus_tag=AC57_RS07050;product=RNase E specificity factor CsrD;protein_id=WP_001241469.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 36674 37648 . + . ID=gene-AC57_RS07045;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=AC57_RS07045;old_locus_tag=AC57_3593 NZ_JJLR01000124.1 Protein Homology CDS 36674 37648 . + 0 ID=cds-WP_001148481.1;Parent=gene-AC57_RS07045;Dbxref=GenBank:WP_001148481.1;Name=WP_001148481.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;gene=yhdH;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417719.1;locus_tag=AC57_RS07045;product=acrylyl-CoA reductase (NADPH);protein_id=WP_001148481.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 38626 39096 . + . ID=gene-AC57_RS07035;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AC57_RS07035;old_locus_tag=AC57_3596 NZ_JJLR01000124.1 Protein Homology CDS 38626 39096 . + 0 ID=cds-WP_000354622.1;Parent=gene-AC57_RS07035;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AC57_RS07035;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 39107 40456 . + . ID=gene-AC57_RS07030;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AC57_RS07030;old_locus_tag=AC57_3597 NZ_JJLR01000124.1 Protein Homology CDS 39107 40456 . + 0 ID=cds-WP_000884639.1;Parent=gene-AC57_RS07030;Dbxref=GenBank:WP_000884639.1;Name=WP_000884639.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AC57_RS07030;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 40565 40807 . + . ID=gene-AC57_RS07025;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=AC57_RS07025;old_locus_tag=AC57_3598 NZ_JJLR01000124.1 Protein Homology CDS 40565 40807 . + 0 ID=cds-WP_000381173.1;Parent=gene-AC57_RS07025;Dbxref=GenBank:WP_000381173.1;Name=WP_000381173.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417723.1;locus_tag=AC57_RS07025;product=YhdT family protein;protein_id=WP_000381173.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 40797 42248 . + . ID=gene-AC57_RS07020;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AC57_RS07020;old_locus_tag=AC57_3599 NZ_JJLR01000124.1 Protein Homology CDS 40797 42248 . + 0 ID=cds-WP_001428262.1;Parent=gene-AC57_RS07020;Dbxref=GenBank:WP_001428262.1;Name=WP_001428262.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AC57_RS07020;product=sodium/pantothenate symporter;protein_id=WP_001428262.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 42260 43141 . + . ID=gene-AC57_RS07015;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AC57_RS07015;old_locus_tag=AC57_3600 NZ_JJLR01000124.1 Protein Homology CDS 42260 43141 . + 0 ID=cds-WP_001145827.1;Parent=gene-AC57_RS07015;Dbxref=GenBank:WP_001145827.1;Name=WP_001145827.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AC57_RS07015;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145827.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 43470 44435 . + . ID=gene-AC57_RS07010;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AC57_RS07010;old_locus_tag=AC57_3601 NZ_JJLR01000124.1 Protein Homology CDS 43470 44435 . + 0 ID=cds-WP_001219652.1;Parent=gene-AC57_RS07010;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AC57_RS07010;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 44461 44757 . + . ID=gene-AC57_RS07005;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AC57_RS07005;old_locus_tag=AC57_3602 NZ_JJLR01000124.1 Protein Homology CDS 44461 44757 . + 0 ID=cds-WP_000462905.1;Parent=gene-AC57_RS07005;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AC57_RS07005;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 44843 45727 . + . ID=gene-AC57_RS07000;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AC57_RS07000;old_locus_tag=AC57_3603 NZ_JJLR01000124.1 Protein Homology CDS 44843 45727 . + 0 ID=cds-WP_032246311.1;Parent=gene-AC57_RS07000;Dbxref=GenBank:WP_032246311.1;Name=WP_032246311.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312161.2;locus_tag=AC57_RS07000;product=adenine-specific DNA-methyltransferase;protein_id=WP_032246311.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 45811 45990 . + . ID=gene-AC57_RS0125050;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=AC57_RS0125050 NZ_JJLR01000124.1 Protein Homology CDS 45811 45990 . + 0 ID=cds-WP_001295275.1;Parent=gene-AC57_RS0125050;Dbxref=GenBank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AC57_RS0125050;product=DUF2556 family protein;protein_id=WP_001295275.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 45993 46655 . - . ID=gene-AC57_RS06995;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AC57_RS06995;old_locus_tag=AC57_3605 NZ_JJLR01000124.1 Protein Homology CDS 45993 46655 . - 0 ID=cds-WP_032237535.1;Parent=gene-AC57_RS06995;Dbxref=GenBank:WP_032237535.1;Name=WP_032237535.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AC57_RS06995;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_032237535.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 47054 48211 . + . ID=gene-AC57_RS06990;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AC57_RS06990;old_locus_tag=AC57_3606 NZ_JJLR01000124.1 Protein Homology CDS 47054 48211 . + 0 ID=cds-WP_000160334.1;Parent=gene-AC57_RS06990;Dbxref=GenBank:WP_000160334.1;Name=WP_000160334.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417731.1;locus_tag=AC57_RS06990;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_000160334.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 48223 51327 . + . ID=gene-AC57_RS06985;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AC57_RS06985;old_locus_tag=AC57_3607 NZ_JJLR01000124.1 Protein Homology CDS 48223 51327 . + 0 ID=cds-WP_032279655.1;Parent=gene-AC57_RS06985;Dbxref=GenBank:WP_032279655.1;Name=WP_032279655.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AC57_RS06985;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_032279655.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 51580 51801 . + . ID=gene-AC57_RS06980;Name=AC57_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06980;old_locus_tag=AC57_3608 NZ_JJLR01000124.1 Protein Homology CDS 51580 51801 . + 0 ID=cds-WP_000825639.1;Parent=gene-AC57_RS06980;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AC57_RS06980;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 52232 53257 . + . ID=gene-AC57_RS06975;Name=AC57_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06975;old_locus_tag=AC57_3609 NZ_JJLR01000124.1 Protein Homology CDS 52232 53257 . + 0 ID=cds-WP_000738568.1;Parent=gene-AC57_RS06975;Dbxref=GenBank:WP_000738568.1;Name=WP_000738568.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AC57_RS06975;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738568.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 53325 54506 . + . ID=gene-AC57_RS06970;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=AC57_RS06970;old_locus_tag=AC57_3610 NZ_JJLR01000124.1 Protein Homology CDS 53325 54506 . + 0 ID=cds-WP_000019655.1;Parent=gene-AC57_RS06970;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yhdX;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AC57_RS06970;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 54516 55619 . + . ID=gene-AC57_RS06965;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=AC57_RS06965;old_locus_tag=AC57_3611 NZ_JJLR01000124.1 Protein Homology CDS 54516 55619 . + 0 ID=cds-WP_001300681.1;Parent=gene-AC57_RS06965;Dbxref=GenBank:WP_001300681.1;Name=WP_001300681.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdY;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417736.2;locus_tag=AC57_RS06965;product=amino acid ABC transporter permease;protein_id=WP_001300681.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 55627 56385 . + . ID=gene-AC57_RS06960;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=AC57_RS06960;old_locus_tag=AC57_3612 NZ_JJLR01000124.1 Protein Homology CDS 55627 56385 . + 0 ID=cds-WP_000078349.1;Parent=gene-AC57_RS06960;Dbxref=GenBank:WP_000078349.1;Name=WP_000078349.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdZ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417737.1;locus_tag=AC57_RS06960;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078349.1;transl_table=11 NZ_JJLR01000124.1 RefSeq gene 56616 56731 . - . ID=gene-AC57_RS06955;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS06955;old_locus_tag=AC57_3613 NZ_JJLR01000124.1 cmsearch rRNA 56616 56731 . - . ID=rna-AC57_RS06955;Parent=gene-AC57_RS06955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS06955;product=5S ribosomal RNA NZ_JJLR01000124.1 cmsearch exon 56616 56731 . - . ID=exon-AC57_RS06955-1;Parent=rna-AC57_RS06955;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS06955;product=5S ribosomal RNA NZ_JJLR01000124.1 RefSeq gene 56771 56846 . - . ID=gene-AC57_RS06950;Name=AC57_RS06950;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS06950;old_locus_tag=AC57_3614 NZ_JJLR01000124.1 tRNAscan-SE tRNA 56771 56846 . - . ID=rna-AC57_RS06950;Parent=gene-AC57_RS06950;anticodon=(pos:complement(56811..56813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS06950;product=tRNA-Thr NZ_JJLR01000124.1 tRNAscan-SE exon 56771 56846 . - . ID=exon-AC57_RS06950-1;Parent=rna-AC57_RS06950;anticodon=(pos:complement(56811..56813));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS06950;product=tRNA-Thr NZ_JJLR01000124.1 RefSeq gene 56861 56976 . - . ID=gene-AC57_RS06945;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS06945;old_locus_tag=AC57_3615 NZ_JJLR01000124.1 cmsearch rRNA 56861 56976 . - . ID=rna-AC57_RS06945;Parent=gene-AC57_RS06945;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS06945;product=5S ribosomal RNA NZ_JJLR01000124.1 cmsearch exon 56861 56976 . - . ID=exon-AC57_RS06945-1;Parent=rna-AC57_RS06945;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS06945;product=5S ribosomal RNA NZ_JJLR01000124.1 RefSeq gene 57016 57091 . - . ID=gene-AC57_RS06940;Name=AC57_RS06940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS06940;old_locus_tag=AC57_3616 NZ_JJLR01000124.1 tRNAscan-SE tRNA 57016 57091 . - . ID=rna-AC57_RS06940;Parent=gene-AC57_RS06940;anticodon=(pos:complement(57056..57058));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS06940;product=tRNA-Thr NZ_JJLR01000124.1 tRNAscan-SE exon 57016 57091 . - . ID=exon-AC57_RS06940-1;Parent=rna-AC57_RS06940;anticodon=(pos:complement(57056..57058));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS06940;product=tRNA-Thr NZ_JJLR01000124.1 RefSeq gene 57106 57221 . - . ID=gene-AC57_RS06935;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS06935;old_locus_tag=AC57_3617 NZ_JJLR01000124.1 cmsearch rRNA 57106 57221 . - . ID=rna-AC57_RS06935;Parent=gene-AC57_RS06935;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS06935;product=5S ribosomal RNA NZ_JJLR01000124.1 cmsearch exon 57106 57221 . - . ID=exon-AC57_RS06935-1;Parent=rna-AC57_RS06935;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS06935;product=5S ribosomal RNA ##sequence-region NZ_JJLR01000125.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000125.1 RefSeq region 1 351 . + . ID=NZ_JJLR01000125.1:1..351;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000125.1 RefSeq gene 1 351 . + . ID=gene-AC57_RS0125060;Name=AC57_RS0125060;end_range=351,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS0125060;partial=true;start_range=.,1 NZ_JJLR01000125.1 cmsearch rRNA 1 351 . + . ID=rna-AC57_RS0125060;Parent=gene-AC57_RS0125060;Dbxref=RFAM:RF02541;end_range=351,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125060;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLR01000125.1 cmsearch exon 1 351 . + . ID=exon-AC57_RS0125060-1;Parent=rna-AC57_RS0125060;Dbxref=RFAM:RF02541;end_range=351,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125060;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJLR01000126.1 1 28015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000126.1 RefSeq region 1 28015 . + . ID=NZ_JJLR01000126.1:1..28015;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000126.1 RefSeq gene 1 1000 . - . ID=gene-AC57_RS0125065;Name=AC57_RS0125065;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS0125065;partial=true;start_range=.,1 NZ_JJLR01000126.1 cmsearch rRNA 1 1000 . - . ID=rna-AC57_RS0125065;Parent=gene-AC57_RS0125065;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125065;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLR01000126.1 cmsearch exon 1 1000 . - . ID=exon-AC57_RS0125065-1;Parent=rna-AC57_RS0125065;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125065;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLR01000126.1 RefSeq gene 1474 2028 . + . ID=gene-AC57_RS06930;Name=AC57_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06930;old_locus_tag=AC57_3619 NZ_JJLR01000126.1 Protein Homology CDS 1474 2028 . + 0 ID=cds-WP_001286216.1;Parent=gene-AC57_RS06930;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AC57_RS06930;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 2004 2261 . - . ID=gene-AC57_RS06925;Name=AC57_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06925;old_locus_tag=AC57_3620 NZ_JJLR01000126.1 Protein Homology CDS 2004 2261 . - 0 ID=cds-WP_001070563.1;Parent=gene-AC57_RS06925;Dbxref=GenBank:WP_001070563.1;Name=WP_001070563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417739.1;locus_tag=AC57_RS06925;product=DUF1488 domain-containing protein;protein_id=WP_001070563.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 2258 3076 . - . ID=gene-AC57_RS06920;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AC57_RS06920;old_locus_tag=AC57_3621 NZ_JJLR01000126.1 Protein Homology CDS 2258 3076 . - 0 ID=cds-WP_000451243.1;Parent=gene-AC57_RS06920;Dbxref=GenBank:WP_000451243.1;Name=WP_000451243.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417740.1;locus_tag=AC57_RS06920;product=shikimate dehydrogenase;protein_id=WP_000451243.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 3081 3653 . - . ID=gene-AC57_RS06915;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AC57_RS06915;old_locus_tag=AC57_3622 NZ_JJLR01000126.1 Protein Homology CDS 3081 3653 . - 0 ID=cds-WP_032279913.1;Parent=gene-AC57_RS06915;Dbxref=GenBank:WP_032279913.1;Name=WP_032279913.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417741.1;locus_tag=AC57_RS06915;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_032279913.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 3658 4200 . - . ID=gene-AC57_RS0125070;Name=AC57_RS0125070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125070 NZ_JJLR01000126.1 Protein Homology CDS 3658 4200 . - 0 ID=cds-WP_001129722.1;Parent=gene-AC57_RS0125070;Dbxref=GenBank:WP_001129722.1;Name=WP_001129722.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AC57_RS0125070;product=DNA topoisomerase family protein;protein_id=WP_001129722.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 4229 4702 . - . ID=gene-AC57_RS06910;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AC57_RS06910;old_locus_tag=AC57_3624 NZ_JJLR01000126.1 Protein Homology CDS 4229 4702 . - 0 ID=cds-WP_000460680.1;Parent=gene-AC57_RS06910;Dbxref=GenBank:WP_000460680.1;Name=WP_000460680.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AC57_RS06910;product=DUF494 family protein Smg;protein_id=WP_000460680.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 4674 5798 . - . ID=gene-AC57_RS06905;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AC57_RS06905;old_locus_tag=AC57_3625 NZ_JJLR01000126.1 Protein Homology CDS 4674 5798 . - 0 ID=cds-WP_000228551.1;Parent=gene-AC57_RS06905;Dbxref=GenBank:WP_000228551.1;Name=WP_000228551.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AC57_RS06905;product=DNA-protecting protein DprA;protein_id=WP_000228551.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 5928 6437 . + . ID=gene-AC57_RS06900;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AC57_RS06900;old_locus_tag=AC57_3626 NZ_JJLR01000126.1 Protein Homology CDS 5928 6437 . + 0 ID=cds-WP_000114984.1;Parent=gene-AC57_RS06900;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AC57_RS06900;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 6452 7399 . + . ID=gene-AC57_RS06895;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AC57_RS06895;old_locus_tag=AC57_3627 NZ_JJLR01000126.1 Protein Homology CDS 6452 7399 . + 0 ID=cds-WP_000004473.1;Parent=gene-AC57_RS06895;Dbxref=GenBank:WP_000004473.1;Name=WP_000004473.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417746.1;locus_tag=AC57_RS06895;product=methionyl-tRNA formyltransferase;protein_id=WP_000004473.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 7445 8734 . + . ID=gene-AC57_RS06890;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AC57_RS06890;old_locus_tag=AC57_3628 NZ_JJLR01000126.1 Protein Homology CDS 7445 8734 . + 0 ID=cds-WP_000744778.1;Parent=gene-AC57_RS06890;Dbxref=GenBank:WP_000744778.1;Name=WP_000744778.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AC57_RS06890;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_000744778.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 8756 10132 . + . ID=gene-AC57_RS06885;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AC57_RS06885;old_locus_tag=AC57_3629 NZ_JJLR01000126.1 Protein Homology CDS 8756 10132 . + 0 ID=cds-WP_000691382.1;Parent=gene-AC57_RS06885;Dbxref=GenBank:WP_000691382.1;Name=WP_000691382.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AC57_RS06885;product=Trk system potassium transporter TrkA;protein_id=WP_000691382.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 10262 10672 . + . ID=gene-AC57_RS06880;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AC57_RS06880;old_locus_tag=AC57_3630 NZ_JJLR01000126.1 Protein Homology CDS 10262 10672 . + 0 ID=cds-WP_000022442.1;Parent=gene-AC57_RS06880;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AC57_RS06880;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 10669 10887 . - . ID=gene-AC57_RS0125075;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AC57_RS0125075 NZ_JJLR01000126.1 Protein Homology CDS 10669 10887 . - 0 ID=cds-WP_000092696.1;Parent=gene-AC57_RS0125075;Dbxref=GenBank:WP_000092696.1;Name=WP_000092696.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AC57_RS0125075;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092696.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 10943 11368 . - . ID=gene-AC57_RS06875;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AC57_RS06875;old_locus_tag=AC57_3631 NZ_JJLR01000126.1 Protein Homology CDS 10943 11368 . - 0 ID=cds-WP_000285607.1;Parent=gene-AC57_RS06875;Dbxref=GenBank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AC57_RS06875;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 11379 11747 . - . ID=gene-AC57_RS06870;Name=AC57_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06870;old_locus_tag=AC57_3632 NZ_JJLR01000126.1 Protein Homology CDS 11379 11747 . - 0 ID=cds-WP_000266486.1;Parent=gene-AC57_RS06870;Dbxref=GenBank:WP_000266486.1;Name=WP_000266486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417752.1;locus_tag=AC57_RS06870;product=DUF1992 domain-containing protein;protein_id=WP_000266486.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 11854 12237 . - . ID=gene-AC57_RS06865;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AC57_RS06865;old_locus_tag=AC57_3633 NZ_JJLR01000126.1 Protein Homology CDS 11854 12237 . - 0 ID=cds-WP_001216368.1;Parent=gene-AC57_RS06865;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AC57_RS06865;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 12278 13267 . - . ID=gene-AC57_RS06860;Name=AC57_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06860;old_locus_tag=AC57_3634 NZ_JJLR01000126.1 Protein Homology CDS 12278 13267 . - 0 ID=cds-WP_001162094.1;Parent=gene-AC57_RS06860;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AC57_RS06860;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 13293 13913 . - . ID=gene-AC57_RS06855;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AC57_RS06855;old_locus_tag=AC57_3635 NZ_JJLR01000126.1 Protein Homology CDS 13293 13913 . - 0 ID=cds-WP_000135224.1;Parent=gene-AC57_RS06855;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AC57_RS06855;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 13947 14336 . - . ID=gene-AC57_RS06850;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AC57_RS06850;old_locus_tag=AC57_3636 NZ_JJLR01000126.1 Protein Homology CDS 13947 14336 . - 0 ID=cds-WP_001029684.1;Parent=gene-AC57_RS06850;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AC57_RS06850;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 14353 14709 . - . ID=gene-AC57_RS06845;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AC57_RS06845;old_locus_tag=AC57_3637 NZ_JJLR01000126.1 Protein Homology CDS 14353 14709 . - 0 ID=cds-WP_000090775.1;Parent=gene-AC57_RS06845;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AC57_RS06845;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 14856 14972 . - . ID=gene-AC57_RS06840;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AC57_RS06840;old_locus_tag=AC57_3638 NZ_JJLR01000126.1 Protein Homology CDS 14856 14972 . - 0 ID=cds-WP_000868187.1;Parent=gene-AC57_RS06840;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AC57_RS06840;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 15004 16335 . - . ID=gene-AC57_RS06835;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AC57_RS06835;old_locus_tag=AC57_3639 NZ_JJLR01000126.1 Protein Homology CDS 15004 16335 . - 0 ID=cds-WP_001464713.1;Parent=gene-AC57_RS06835;Dbxref=GenBank:WP_001464713.1;Name=WP_001464713.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AC57_RS06835;product=preprotein translocase subunit SecY;protein_id=WP_001464713.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 16343 16777 . - . ID=gene-AC57_RS06830;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AC57_RS06830;old_locus_tag=AC57_3640 NZ_JJLR01000126.1 Protein Homology CDS 16343 16777 . - 0 ID=cds-WP_032237770.1;Parent=gene-AC57_RS06830;Dbxref=GenBank:WP_032237770.1;Name=WP_032237770.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AC57_RS06830;product=50S ribosomal protein L15;protein_id=WP_032237770.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 16781 16960 . - . ID=gene-AC57_RS06825;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AC57_RS06825;old_locus_tag=AC57_3641 NZ_JJLR01000126.1 Protein Homology CDS 16781 16960 . - 0 ID=cds-WP_001140433.1;Parent=gene-AC57_RS06825;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AC57_RS06825;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 16964 17467 . - . ID=gene-AC57_RS06820;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AC57_RS06820;old_locus_tag=AC57_3642 NZ_JJLR01000126.1 Protein Homology CDS 16964 17467 . - 0 ID=cds-WP_000940121.1;Parent=gene-AC57_RS06820;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AC57_RS06820;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 17482 17835 . - . ID=gene-AC57_RS06815;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AC57_RS06815;old_locus_tag=AC57_3643 NZ_JJLR01000126.1 Protein Homology CDS 17482 17835 . - 0 ID=cds-WP_000358960.1;Parent=gene-AC57_RS06815;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AC57_RS06815;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 17845 18378 . - . ID=gene-AC57_RS06810;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AC57_RS06810;old_locus_tag=AC57_3644 NZ_JJLR01000126.1 Protein Homology CDS 17845 18378 . - 0 ID=cds-WP_000091945.1;Parent=gene-AC57_RS06810;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AC57_RS06810;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 18391 18783 . - . ID=gene-AC57_RS06805;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AC57_RS06805;old_locus_tag=AC57_3645 NZ_JJLR01000126.1 Protein Homology CDS 18391 18783 . - 0 ID=cds-WP_000062611.1;Parent=gene-AC57_RS06805;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AC57_RS06805;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 18817 19122 . - . ID=gene-AC57_RS06800;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AC57_RS06800;old_locus_tag=AC57_3646 NZ_JJLR01000126.1 Protein Homology CDS 18817 19122 . - 0 ID=cds-WP_001118930.1;Parent=gene-AC57_RS06800;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AC57_RS06800;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 19137 19676 . - . ID=gene-AC57_RS06795;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AC57_RS06795;old_locus_tag=AC57_3647 NZ_JJLR01000126.1 Protein Homology CDS 19137 19676 . - 0 ID=cds-WP_001096200.1;Parent=gene-AC57_RS06795;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AC57_RS06795;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 19691 20005 . - . ID=gene-AC57_RS06790;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AC57_RS06790;old_locus_tag=AC57_3648 NZ_JJLR01000126.1 Protein Homology CDS 19691 20005 . - 0 ID=cds-WP_000729185.1;Parent=gene-AC57_RS06790;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AC57_RS06790;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 20016 20387 . - . ID=gene-AC57_RS06785;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AC57_RS06785;old_locus_tag=AC57_3649 NZ_JJLR01000126.1 Protein Homology CDS 20016 20387 . - 0 ID=cds-WP_000613955.1;Parent=gene-AC57_RS06785;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AC57_RS06785;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 20552 20806 . - . ID=gene-AC57_RS06780;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AC57_RS06780;old_locus_tag=AC57_3650 NZ_JJLR01000126.1 Protein Homology CDS 20552 20806 . - 0 ID=cds-WP_000130100.1;Parent=gene-AC57_RS06780;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AC57_RS06780;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 20806 20997 . - . ID=gene-AC57_RS06775;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AC57_RS06775;old_locus_tag=AC57_3651 NZ_JJLR01000126.1 Protein Homology CDS 20806 20997 . - 0 ID=cds-WP_000644741.1;Parent=gene-AC57_RS06775;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AC57_RS06775;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 20997 21407 . - . ID=gene-AC57_RS06770;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AC57_RS06770;old_locus_tag=AC57_3652 NZ_JJLR01000126.1 Protein Homology CDS 20997 21407 . - 0 ID=cds-WP_000941212.1;Parent=gene-AC57_RS06770;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AC57_RS06770;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 21420 22121 . - . ID=gene-AC57_RS06765;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AC57_RS06765;old_locus_tag=AC57_3653 NZ_JJLR01000126.1 Protein Homology CDS 21420 22121 . - 0 ID=cds-WP_000529945.1;Parent=gene-AC57_RS06765;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AC57_RS06765;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 22139 22471 . - . ID=gene-AC57_RS06760;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AC57_RS06760;old_locus_tag=AC57_3654 NZ_JJLR01000126.1 Protein Homology CDS 22139 22471 . - 0 ID=cds-WP_000447529.1;Parent=gene-AC57_RS06760;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AC57_RS06760;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 22486 22764 . - . ID=gene-AC57_RS0125080;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AC57_RS0125080 NZ_JJLR01000126.1 Protein Homology CDS 22486 22764 . - 0 ID=cds-WP_001138117.1;Parent=gene-AC57_RS0125080;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AC57_RS0125080;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 22781 23602 . - . ID=gene-AC57_RS06755;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AC57_RS06755;old_locus_tag=AC57_3656 NZ_JJLR01000126.1 Protein Homology CDS 22781 23602 . - 0 ID=cds-WP_000301864.1;Parent=gene-AC57_RS06755;Dbxref=GenBank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AC57_RS06755;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 23620 23922 . - . ID=gene-AC57_RS06750;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AC57_RS06750;old_locus_tag=AC57_3657 NZ_JJLR01000126.1 Protein Homology CDS 23620 23922 . - 0 ID=cds-WP_000617544.1;Parent=gene-AC57_RS06750;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AC57_RS06750;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 23919 24524 . - . ID=gene-AC57_RS06745;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AC57_RS06745;old_locus_tag=AC57_3658 NZ_JJLR01000126.1 Protein Homology CDS 23919 24524 . - 0 ID=cds-WP_000424395.1;Parent=gene-AC57_RS06745;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AC57_RS06745;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 24535 25164 . - . ID=gene-AC57_RS06740;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AC57_RS06740;old_locus_tag=AC57_3659 NZ_JJLR01000126.1 Protein Homology CDS 24535 25164 . - 0 ID=cds-WP_000579833.1;Parent=gene-AC57_RS06740;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AC57_RS06740;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 25197 25508 . - . ID=gene-AC57_RS06735;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AC57_RS06735;old_locus_tag=AC57_3660 NZ_JJLR01000126.1 Protein Homology CDS 25197 25508 . - 0 ID=cds-WP_001181004.1;Parent=gene-AC57_RS06735;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AC57_RS06735;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 25746 26165 . - . ID=gene-AC57_RS06730;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=AC57_RS06730;old_locus_tag=AC57_3661 NZ_JJLR01000126.1 Protein Homology CDS 25746 26165 . - 0 ID=cds-WP_000461450.1;Parent=gene-AC57_RS06730;Dbxref=GenBank:WP_000461450.1;Name=WP_000461450.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417781.1;locus_tag=AC57_RS06730;product=putative general secretion pathway protein GspB;protein_id=WP_000461450.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 26167 27636 . - . ID=gene-AC57_RS06725;Name=gspA;gbkey=Gene;gene=gspA;gene_biotype=protein_coding;locus_tag=AC57_RS06725;old_locus_tag=AC57_3662 NZ_JJLR01000126.1 Protein Homology CDS 26167 27636 . - 0 ID=cds-WP_000107576.1;Parent=gene-AC57_RS06725;Dbxref=GenBank:WP_000107576.1;Name=WP_000107576.1;gbkey=CDS;gene=gspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417782.1;locus_tag=AC57_RS06725;product=type II secretion system protein GspA;protein_id=WP_000107576.1;transl_table=11 NZ_JJLR01000126.1 RefSeq gene 27820 28015 . + . ID=gene-AC57_RS27830;Name=AC57_RS27830;end_range=28015,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27830;old_locus_tag=AC57_3663;partial=true NZ_JJLR01000126.1 Protein Homology CDS 27820 28015 . + 0 ID=cds-WP_000179197.1-2;Parent=gene-AC57_RS27830;Dbxref=GenBank:WP_000179197.1;Name=WP_000179197.1;Ontology_term=GO:0006313;end_range=28015,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27830;partial=true;product=IS1 family transposase;protein_id=WP_000179197.1;transl_table=11 ##sequence-region NZ_JJLR01000127.1 1 85733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000127.1 RefSeq region 1 85733 . + . ID=NZ_JJLR01000127.1:1..85733;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000127.1 RefSeq gene 1 596 . - . ID=gene-AC57_RS06720;Name=AC57_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06720;old_locus_tag=AC57_3664;partial=true;start_range=.,1 NZ_JJLR01000127.1 Protein Homology CDS 1 596 . - 0 ID=cds-WP_000031754.1;Parent=gene-AC57_RS06720;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC57_RS06720;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;start_range=.,1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 667 2781 . - . ID=gene-AC57_RS06715;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AC57_RS06715;old_locus_tag=AC57_3665 NZ_JJLR01000127.1 Protein Homology CDS 667 2781 . - 0 ID=cds-WP_001428267.1;Parent=gene-AC57_RS06715;Dbxref=GenBank:WP_001428267.1;Name=WP_001428267.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AC57_RS06715;product=elongation factor G;protein_id=WP_001428267.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 2878 3348 . - . ID=gene-AC57_RS06710;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AC57_RS06710;old_locus_tag=AC57_3666 NZ_JJLR01000127.1 Protein Homology CDS 2878 3348 . - 0 ID=cds-WP_001138043.1;Parent=gene-AC57_RS06710;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AC57_RS06710;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 3445 3819 . - . ID=gene-AC57_RS06705;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AC57_RS06705;old_locus_tag=AC57_3667 NZ_JJLR01000127.1 Protein Homology CDS 3445 3819 . - 0 ID=cds-WP_000246815.1;Parent=gene-AC57_RS06705;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AC57_RS06705;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 3945 4232 . - . ID=gene-AC57_RS06700;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AC57_RS06700;old_locus_tag=AC57_3668 NZ_JJLR01000127.1 Protein Homology CDS 3945 4232 . - 0 ID=cds-WP_000903375.1;Parent=gene-AC57_RS06700;Dbxref=GenBank:WP_000903375.1;Name=WP_000903375.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417802.1;locus_tag=AC57_RS06700;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903375.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 4240 4599 . - . ID=gene-AC57_RS06695;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AC57_RS06695;old_locus_tag=AC57_3669 NZ_JJLR01000127.1 Protein Homology CDS 4240 4599 . - 0 ID=cds-WP_001401210.1;Parent=gene-AC57_RS06695;Dbxref=GenBank:WP_001401210.1;Name=WP_001401210.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417803.1;locus_tag=AC57_RS06695;product=sulfurtransferase complex subunit TusC;protein_id=WP_001401210.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 4599 4985 . - . ID=gene-AC57_RS06690;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AC57_RS06690;old_locus_tag=AC57_3670 NZ_JJLR01000127.1 Protein Homology CDS 4599 4985 . - 0 ID=cds-WP_001723976.1;Parent=gene-AC57_RS06690;Dbxref=GenBank:WP_001723976.1;Name=WP_001723976.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417804.1;locus_tag=AC57_RS06690;product=sulfurtransferase complex subunit TusD;protein_id=WP_001723976.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 4985 5707 . - . ID=gene-AC57_RS06685;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=AC57_RS06685;old_locus_tag=AC57_3671 NZ_JJLR01000127.1 Protein Homology CDS 4985 5707 . - 0 ID=cds-WP_000091466.1;Parent=gene-AC57_RS06685;Dbxref=GenBank:WP_000091466.1;Name=WP_000091466.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;gene=yheO;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=AC57_RS06685;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091466.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 5874 6686 . - . ID=gene-AC57_RS06680;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AC57_RS06680;old_locus_tag=AC57_3672 NZ_JJLR01000127.1 Protein Homology CDS 5874 6686 . - 0 ID=cds-WP_000838250.1;Parent=gene-AC57_RS06680;Dbxref=GenBank:WP_000838250.1;Name=WP_000838250.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417806.1;locus_tag=AC57_RS06680;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838250.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 6907 7125 . + . ID=gene-AC57_RS06675;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AC57_RS06675;old_locus_tag=AC57_3673 NZ_JJLR01000127.1 Protein Homology CDS 6907 7125 . + 0 ID=cds-WP_001153615.1;Parent=gene-AC57_RS06675;Dbxref=GenBank:WP_001153615.1;Name=WP_001153615.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AC57_RS06675;product=protein SlyX;protein_id=WP_001153615.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 7174 7764 . - . ID=gene-AC57_RS06670;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AC57_RS06670;old_locus_tag=AC57_3674 NZ_JJLR01000127.1 Protein Homology CDS 7174 7764 . - 0 ID=cds-WP_000861334.1;Parent=gene-AC57_RS06670;Dbxref=GenBank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AC57_RS06670;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 7859 8059 . - . ID=gene-AC57_RS06665;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AC57_RS06665;old_locus_tag=AC57_3675 NZ_JJLR01000127.1 Protein Homology CDS 7859 8059 . - 0 ID=cds-WP_001007730.1;Parent=gene-AC57_RS06665;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AC57_RS06665;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 8069 9874 . - . ID=gene-AC57_RS06660;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AC57_RS06660;old_locus_tag=AC57_3676 NZ_JJLR01000127.1 Protein Homology CDS 8069 9874 . - 0 ID=cds-WP_000399147.1;Parent=gene-AC57_RS06660;Dbxref=GenBank:WP_000399147.1;Name=WP_000399147.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AC57_RS06660;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000399147.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 9874 10425 . - . ID=gene-AC57_RS06655;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AC57_RS06655;old_locus_tag=AC57_3677 NZ_JJLR01000127.1 Protein Homology CDS 9874 10425 . - 0 ID=cds-WP_032267854.1;Parent=gene-AC57_RS06655;Dbxref=GenBank:WP_032267854.1;Name=WP_032267854.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AC57_RS06655;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_032267854.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 10556 12469 . + . ID=gene-AC57_RS06650;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AC57_RS06650;old_locus_tag=AC57_3678 NZ_JJLR01000127.1 Protein Homology CDS 10556 12469 . + 0 ID=cds-WP_000634798.1;Parent=gene-AC57_RS06650;Dbxref=GenBank:WP_000634798.1;Name=WP_000634798.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AC57_RS06650;product=ABC transporter ATP-binding protein;protein_id=WP_000634798.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 12469 13491 . + . ID=gene-AC57_RS06645;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AC57_RS06645;old_locus_tag=AC57_3679 NZ_JJLR01000127.1 Protein Homology CDS 12469 13491 . + 0 ID=cds-WP_032237740.1;Parent=gene-AC57_RS06645;Dbxref=GenBank:WP_032237740.1;Name=WP_032237740.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417812.1;locus_tag=AC57_RS06645;product=hydrolase;protein_id=WP_032237740.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 13485 13703 . + . ID=gene-AC57_RS06640;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AC57_RS06640;old_locus_tag=AC57_3680 NZ_JJLR01000127.1 Protein Homology CDS 13485 13703 . + 0 ID=cds-WP_000907085.1;Parent=gene-AC57_RS06640;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AC57_RS06640;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 13757 14626 . + . ID=gene-AC57_RS06635;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AC57_RS06635;old_locus_tag=AC57_3681 NZ_JJLR01000127.1 Protein Homology CDS 13757 14626 . + 0 ID=cds-WP_001274680.1;Parent=gene-AC57_RS06635;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AC57_RS06635;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 14681 15085 . - . ID=gene-AC57_RS06630;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AC57_RS06630;old_locus_tag=AC57_3682 NZ_JJLR01000127.1 Protein Homology CDS 14681 15085 . - 0 ID=cds-WP_001148908.1;Parent=gene-AC57_RS06630;Dbxref=GenBank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AC57_RS06630;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 15387 16019 . + . ID=gene-AC57_RS06625;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AC57_RS06625;old_locus_tag=AC57_3683 NZ_JJLR01000127.1 Protein Homology CDS 15387 16019 . + 0 ID=cds-WP_000242755.1;Parent=gene-AC57_RS06625;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AC57_RS06625;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 16070 18160 . + . ID=gene-AC57_RS06620;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AC57_RS06620;old_locus_tag=AC57_3684 NZ_JJLR01000127.1 Protein Homology CDS 16070 18160 . + 0 ID=cds-WP_001295162.1;Parent=gene-AC57_RS06620;Dbxref=GenBank:WP_001295162.1;Name=WP_001295162.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AC57_RS06620;product=YccS/YhfK family putative transporter;protein_id=WP_001295162.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 18227 19447 . - . ID=gene-AC57_RS06615;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AC57_RS06615;old_locus_tag=AC57_3685 NZ_JJLR01000127.1 Protein Homology CDS 18227 19447 . - 0 ID=cds-WP_000963792.1;Parent=gene-AC57_RS06615;Dbxref=GenBank:WP_000963792.1;Name=WP_000963792.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417818.1;locus_tag=AC57_RS06615;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_000963792.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 19533 20096 . - . ID=gene-AC57_RS06610;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AC57_RS06610;old_locus_tag=AC57_3686 NZ_JJLR01000127.1 Protein Homology CDS 19533 20096 . - 0 ID=cds-WP_001753126.1;Parent=gene-AC57_RS06610;Dbxref=GenBank:WP_001753126.1;Name=WP_001753126.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417819.1;locus_tag=AC57_RS06610;product=aminodeoxychorismate synthase component 2;protein_id=WP_001753126.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 20128 20730 . - . ID=gene-AC57_RS06605;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AC57_RS06605;old_locus_tag=AC57_3687 NZ_JJLR01000127.1 Protein Homology CDS 20128 20730 . - 0 ID=cds-WP_032237739.1;Parent=gene-AC57_RS06605;Dbxref=GenBank:WP_032237739.1;Name=WP_032237739.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AC57_RS06605;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_032237739.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 20720 20887 . - . ID=gene-AC57_RS0125090;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AC57_RS0125090 NZ_JJLR01000127.1 Protein Homology CDS 20720 20887 . - 0 ID=cds-WP_000736860.1;Parent=gene-AC57_RS0125090;Dbxref=GenBank:WP_000736860.1;Name=WP_000736860.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709137.1;locus_tag=AC57_RS0125090;product=YhfG family protein;protein_id=WP_000736860.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 20992 21564 . - . ID=gene-AC57_RS06600;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AC57_RS06600;old_locus_tag=AC57_3688 NZ_JJLR01000127.1 Protein Homology CDS 20992 21564 . - 0 ID=cds-WP_000477226.1;Parent=gene-AC57_RS06600;Dbxref=GenBank:WP_000477226.1;Name=WP_000477226.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AC57_RS06600;product=peptidylprolyl isomerase A;protein_id=WP_000477226.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 21835 23016 . + . ID=gene-AC57_RS06595;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AC57_RS06595;old_locus_tag=AC57_3690 NZ_JJLR01000127.1 Protein Homology CDS 21835 23016 . + 0 ID=cds-WP_000185247.1;Parent=gene-AC57_RS06595;Dbxref=GenBank:WP_000185247.1;Name=WP_000185247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417823.1;locus_tag=AC57_RS06595;product=MFS transporter TsgA;protein_id=WP_000185247.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 23278 25821 . + . ID=gene-AC57_RS06590;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AC57_RS06590;old_locus_tag=AC57_3692 NZ_JJLR01000127.1 Protein Homology CDS 23278 25821 . + 0 ID=cds-WP_000049213.1;Parent=gene-AC57_RS06590;Dbxref=GenBank:WP_000049213.1;Name=WP_000049213.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709140.2;locus_tag=AC57_RS06590;product=NADPH-nitrite reductase large subunit;protein_id=WP_000049213.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 25818 26144 . + . ID=gene-AC57_RS06585;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AC57_RS06585;old_locus_tag=AC57_3693 NZ_JJLR01000127.1 Protein Homology CDS 25818 26144 . + 0 ID=cds-WP_000084764.1;Parent=gene-AC57_RS06585;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AC57_RS06585;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 26270 27076 . + . ID=gene-AC57_RS06580;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AC57_RS06580;old_locus_tag=AC57_3694 NZ_JJLR01000127.1 Protein Homology CDS 26270 27076 . + 0 ID=cds-WP_000493556.1;Parent=gene-AC57_RS06580;Dbxref=GenBank:WP_000493556.1;Name=WP_000493556.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026212.2;locus_tag=AC57_RS06580;product=nitrite transporter NirC;protein_id=WP_000493556.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 27095 28468 . + . ID=gene-AC57_RS06575;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AC57_RS06575;old_locus_tag=AC57_3695 NZ_JJLR01000127.1 Protein Homology CDS 27095 28468 . + 0 ID=cds-WP_000349855.1;Parent=gene-AC57_RS06575;Dbxref=GenBank:WP_000349855.1;Name=WP_000349855.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AC57_RS06575;product=siroheme synthase CysG;protein_id=WP_000349855.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 28715 28882 . + . ID=gene-AC57_RS06570;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=AC57_RS06570;old_locus_tag=AC57_3696 NZ_JJLR01000127.1 Protein Homology CDS 28715 28882 . + 0 ID=cds-WP_001031834.1;Parent=gene-AC57_RS06570;Dbxref=GenBank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AC57_RS06570;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 29178 30515 . + . ID=gene-AC57_RS06565;Name=frlA;gbkey=Gene;gene=frlA;gene_biotype=protein_coding;locus_tag=AC57_RS06565;old_locus_tag=AC57_3697 NZ_JJLR01000127.1 Protein Homology CDS 29178 30515 . + 0 ID=cds-WP_000535505.1;Parent=gene-AC57_RS06565;Dbxref=GenBank:WP_000535505.1;Name=WP_000535505.1;gbkey=CDS;gene=frlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417829.2;locus_tag=AC57_RS06565;product=fructoselysine/psicoselysine transporter;protein_id=WP_000535505.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 30536 31558 . + . ID=gene-AC57_RS06560;Name=frlB;gbkey=Gene;gene=frlB;gene_biotype=protein_coding;locus_tag=AC57_RS06560;old_locus_tag=AC57_3698 NZ_JJLR01000127.1 Protein Homology CDS 30536 31558 . + 0 ID=cds-WP_032237337.1;Parent=gene-AC57_RS06560;Dbxref=GenBank:WP_032237337.1;Name=WP_032237337.1;gbkey=CDS;gene=frlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417830.4;locus_tag=AC57_RS06560;product=fructoselysine 6-phosphate deglycase;protein_id=WP_032237337.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 31608 32438 . + . ID=gene-AC57_RS06555;Name=frlC;gbkey=Gene;gene=frlC;gene_biotype=protein_coding;locus_tag=AC57_RS06555;old_locus_tag=AC57_3699 NZ_JJLR01000127.1 Protein Homology CDS 31608 32438 . + 0 ID=cds-WP_000847837.1;Parent=gene-AC57_RS06555;Dbxref=GenBank:WP_000847837.1;Name=WP_000847837.1;gbkey=CDS;gene=frlC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026213.1;locus_tag=AC57_RS06555;product=fructoselysine 3-epimerase;protein_id=WP_000847837.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 32435 33220 . + . ID=gene-AC57_RS06550;Name=frlD;gbkey=Gene;gene=frlD;gene_biotype=protein_coding;locus_tag=AC57_RS06550;old_locus_tag=AC57_3700 NZ_JJLR01000127.1 Protein Homology CDS 32435 33220 . + 0 ID=cds-WP_000853353.1;Parent=gene-AC57_RS06550;Dbxref=GenBank:WP_000853353.1;Name=WP_000853353.1;gbkey=CDS;gene=frlD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417833.1;locus_tag=AC57_RS06550;product=fructoselysine 6-kinase;protein_id=WP_000853353.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 33320 34051 . + . ID=gene-AC57_RS06545;Name=frlR;gbkey=Gene;gene=frlR;gene_biotype=protein_coding;gene_synonym=yhfR;locus_tag=AC57_RS06545;old_locus_tag=AC57_3701 NZ_JJLR01000127.1 Protein Homology CDS 33320 34051 . + 0 ID=cds-WP_001276847.1;Parent=gene-AC57_RS06545;Dbxref=GenBank:WP_001276847.1;Name=WP_001276847.1;gbkey=CDS;gene=frlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417834.6;locus_tag=AC57_RS06545;product=DNA-binding transcriptional regulator FrlR;protein_id=WP_001276847.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 34203 35288 . - . ID=gene-AC57_RS06540;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=AC57_RS06540;old_locus_tag=AC57_3702 NZ_JJLR01000127.1 Protein Homology CDS 34203 35288 . - 0 ID=cds-WP_032237338.1;Parent=gene-AC57_RS06540;Dbxref=GenBank:WP_032237338.1;Name=WP_032237338.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417835.1;locus_tag=AC57_RS06540;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_032237338.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 35300 36604 . - . ID=gene-AC57_RS06535;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=AC57_RS06535;old_locus_tag=AC57_3703 NZ_JJLR01000127.1 Protein Homology CDS 35300 36604 . - 0 ID=cds-WP_000366862.1;Parent=gene-AC57_RS06535;Dbxref=GenBank:WP_000366862.1;Name=WP_000366862.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417836.1;locus_tag=AC57_RS06535;product=YhfT family protein;protein_id=WP_000366862.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 36616 36969 . - . ID=gene-AC57_RS06530;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=AC57_RS06530;old_locus_tag=AC57_3704 NZ_JJLR01000127.1 Protein Homology CDS 36616 36969 . - 0 ID=cds-WP_000719728.1;Parent=gene-AC57_RS06530;Dbxref=GenBank:WP_000719728.1;Name=WP_000719728.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AC57_RS06530;product=DUF2620 domain-containing protein;protein_id=WP_000719728.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 36980 37858 . - . ID=gene-AC57_RS06525;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AC57_RS06525;old_locus_tag=AC57_3705 NZ_JJLR01000127.1 Protein Homology CDS 36980 37858 . - 0 ID=cds-WP_000007010.1;Parent=gene-AC57_RS06525;Dbxref=GenBank:WP_000007010.1;Name=WP_000007010.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AC57_RS06525;product=phosphotriesterase-related protein;protein_id=WP_000007010.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 37855 39081 . - . ID=gene-AC57_RS06520;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;locus_tag=AC57_RS06520;old_locus_tag=AC57_3706 NZ_JJLR01000127.1 Protein Homology CDS 37855 39081 . - 0 ID=cds-WP_000090611.1;Parent=gene-AC57_RS06520;Dbxref=GenBank:WP_000090611.1;Name=WP_000090611.1;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417839.1;locus_tag=AC57_RS06520;product=phosphopentomutase;protein_id=WP_000090611.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 39081 40244 . - . ID=gene-AC57_RS06515;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=AC57_RS06515;old_locus_tag=AC57_3707 NZ_JJLR01000127.1 Protein Homology CDS 39081 40244 . - 0 ID=cds-WP_000497334.1;Parent=gene-AC57_RS06515;Dbxref=GenBank:WP_000497334.1;Name=WP_000497334.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417840.1;locus_tag=AC57_RS06515;product=YhfX family PLP-dependent enzyme;protein_id=WP_000497334.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 40328 40690 . - . ID=gene-AC57_RS06510;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;locus_tag=AC57_RS06510;old_locus_tag=AC57_3708 NZ_JJLR01000127.1 Protein Homology CDS 40328 40690 . - 0 ID=cds-WP_001295165.1;Parent=gene-AC57_RS06510;Dbxref=GenBank:WP_001295165.1;Name=WP_001295165.1;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AC57_RS06510;product=PRD domain protein;protein_id=WP_001295165.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 40707 41612 . - . ID=gene-AC57_RS06505;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AC57_RS06505;old_locus_tag=AC57_3709 NZ_JJLR01000127.1 Protein Homology CDS 40707 41612 . - 0 ID=cds-WP_001254790.1;Parent=gene-AC57_RS06505;Dbxref=GenBank:WP_001254790.1;Name=WP_001254790.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AC57_RS06505;product=GntR family transcriptional regulator YhfZ;protein_id=WP_001254790.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 41902 42906 . - . ID=gene-AC57_RS06500;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AC57_RS06500;old_locus_tag=AC57_3711 NZ_JJLR01000127.1 Protein Homology CDS 41902 42906 . - 0 ID=cds-WP_000165552.1;Parent=gene-AC57_RS06500;Dbxref=GenBank:WP_000165552.1;Name=WP_000165552.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417843.1;locus_tag=AC57_RS06500;product=tryptophan--tRNA ligase;protein_id=WP_000165552.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 42899 43657 . - . ID=gene-AC57_RS06495;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AC57_RS06495;old_locus_tag=AC57_3712 NZ_JJLR01000127.1 Protein Homology CDS 42899 43657 . - 0 ID=cds-WP_032237339.1;Parent=gene-AC57_RS06495;Dbxref=GenBank:WP_032237339.1;Name=WP_032237339.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312254.1;locus_tag=AC57_RS06495;product=phosphoglycolate phosphatase;protein_id=WP_032237339.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 43650 44327 . - . ID=gene-AC57_RS06490;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AC57_RS06490;old_locus_tag=AC57_3713 NZ_JJLR01000127.1 Protein Homology CDS 43650 44327 . - 0 ID=cds-WP_000816280.1;Parent=gene-AC57_RS06490;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AC57_RS06490;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 44345 45181 . - . ID=gene-AC57_RS06485;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AC57_RS06485;old_locus_tag=AC57_3714 NZ_JJLR01000127.1 Protein Homology CDS 44345 45181 . - 0 ID=cds-WP_000742141.1;Parent=gene-AC57_RS06485;Dbxref=GenBank:WP_000742141.1;Name=WP_000742141.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AC57_RS06485;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742141.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 45288 46574 . - . ID=gene-AC57_RS06480;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AC57_RS06480;old_locus_tag=AC57_3715 NZ_JJLR01000127.1 Protein Homology CDS 45288 46574 . - 0 ID=cds-WP_000343195.1;Parent=gene-AC57_RS06480;Dbxref=GenBank:WP_000343195.1;Name=WP_000343195.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=AC57_RS06480;product=cell division protein DamX;protein_id=WP_000343195.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 46666 47754 . - . ID=gene-AC57_RS06475;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AC57_RS06475;old_locus_tag=AC57_3716 NZ_JJLR01000127.1 Protein Homology CDS 46666 47754 . - 0 ID=cds-WP_000439850.1;Parent=gene-AC57_RS06475;Dbxref=GenBank:WP_000439850.1;Name=WP_000439850.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312258.1;locus_tag=AC57_RS06475;product=3-dehydroquinate synthase;protein_id=WP_000439850.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 47811 48332 . - . ID=gene-AC57_RS06470;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AC57_RS06470;old_locus_tag=AC57_3717 NZ_JJLR01000127.1 Protein Homology CDS 47811 48332 . - 0 ID=cds-WP_000818618.1;Parent=gene-AC57_RS06470;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AC57_RS06470;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 48733 49971 . - . ID=gene-AC57_RS06465;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AC57_RS06465;old_locus_tag=AC57_3718 NZ_JJLR01000127.1 Protein Homology CDS 48733 49971 . - 0 ID=cds-WP_000815987.1;Parent=gene-AC57_RS06465;Dbxref=GenBank:WP_000815987.1;Name=WP_000815987.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AC57_RS06465;product=DNA uptake porin HofQ;protein_id=WP_000815987.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 49883 50287 . - . ID=gene-AC57_RS06460;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AC57_RS06460;old_locus_tag=AC57_3719 NZ_JJLR01000127.1 Protein Homology CDS 49883 50287 . - 0 ID=cds-WP_001264141.1;Parent=gene-AC57_RS06460;Dbxref=GenBank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AC57_RS06460;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 50277 50717 . - . ID=gene-AC57_RS06455;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AC57_RS06455;old_locus_tag=AC57_3720 NZ_JJLR01000127.1 Protein Homology CDS 50277 50717 . - 0 ID=cds-WP_001055760.1;Parent=gene-AC57_RS06455;Dbxref=GenBank:WP_001055760.1;Name=WP_001055760.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AC57_RS06455;product=DNA utilization protein HofO;protein_id=WP_001055760.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 50701 51240 . - . ID=gene-AC57_RS06450;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AC57_RS06450;old_locus_tag=AC57_3721 NZ_JJLR01000127.1 Protein Homology CDS 50701 51240 . - 0 ID=cds-WP_001069315.1;Parent=gene-AC57_RS06450;Dbxref=GenBank:WP_001069315.1;Name=WP_001069315.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417853.1;locus_tag=AC57_RS06450;product=DNA utilization protein HofN;protein_id=WP_001069315.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 51240 52019 . - . ID=gene-AC57_RS06445;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AC57_RS06445;old_locus_tag=AC57_3722 NZ_JJLR01000127.1 Protein Homology CDS 51240 52019 . - 0 ID=cds-WP_032237340.1;Parent=gene-AC57_RS06445;Dbxref=GenBank:WP_032237340.1;Name=WP_032237340.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AC57_RS06445;product=DNA utilization protein HofM;protein_id=WP_032237340.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 52139 54691 . + . ID=gene-AC57_RS06440;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AC57_RS06440;old_locus_tag=AC57_3723 NZ_JJLR01000127.1 Protein Homology CDS 52139 54691 . + 0 ID=cds-WP_032279534.1;Parent=gene-AC57_RS06440;Dbxref=GenBank:WP_032279534.1;Name=WP_032279534.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=AC57_RS06440;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_032279534.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 54857 55417 . - . ID=gene-AC57_RS06435;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AC57_RS06435;old_locus_tag=AC57_3724 NZ_JJLR01000127.1 Protein Homology CDS 54857 55417 . - 0 ID=cds-WP_000045744.1;Parent=gene-AC57_RS06435;Dbxref=GenBank:WP_000045744.1;Name=WP_000045744.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417856.1;locus_tag=AC57_RS06435;product=ADP compounds hydrolase NudE;protein_id=WP_000045744.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 55737 57872 . + . ID=gene-AC57_RS06430;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AC57_RS06430;old_locus_tag=AC57_3725 NZ_JJLR01000127.1 Protein Homology CDS 55737 57872 . + 0 ID=cds-WP_000104533.1;Parent=gene-AC57_RS06430;Dbxref=GenBank:WP_000104533.1;Name=WP_000104533.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AC57_RS06430;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104533.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 57937 58605 . + . ID=gene-AC57_RS06425;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AC57_RS06425;old_locus_tag=AC57_3726 NZ_JJLR01000127.1 Protein Homology CDS 57937 58605 . + 0 ID=cds-WP_001295168.1;Parent=gene-AC57_RS06425;Dbxref=GenBank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AC57_RS06425;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 58616 59017 . + . ID=gene-AC57_RS06420;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AC57_RS06420;old_locus_tag=AC57_3727 NZ_JJLR01000127.1 Protein Homology CDS 58616 59017 . + 0 ID=cds-WP_000660483.1;Parent=gene-AC57_RS06420;Dbxref=GenBank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=AC57_RS06420;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 59042 59920 . + . ID=gene-AC57_RS06415;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AC57_RS06415;old_locus_tag=AC57_3728 NZ_JJLR01000127.1 Protein Homology CDS 59042 59920 . + 0 ID=cds-WP_001135574.1;Parent=gene-AC57_RS06415;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AC57_RS06415;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 59983 61707 . - . ID=gene-AC57_RS06410;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AC57_RS06410;old_locus_tag=AC57_3729 NZ_JJLR01000127.1 Protein Homology CDS 59983 61707 . - 0 ID=cds-WP_000370879.1;Parent=gene-AC57_RS06410;Dbxref=GenBank:WP_000370879.1;Name=WP_000370879.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417861.1;locus_tag=AC57_RS06410;product=DUF4153 domain-containing protein;protein_id=WP_000370879.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 62086 63708 . + . ID=gene-AC57_RS06400;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AC57_RS06400;old_locus_tag=AC57_3732 NZ_JJLR01000127.1 Protein Homology CDS 62086 63708 . + 0 ID=cds-WP_001265681.1;Parent=gene-AC57_RS06400;Dbxref=GenBank:WP_001265681.1;Name=WP_001265681.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417862.1;locus_tag=AC57_RS06400;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001265681.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 63784 65136 . - . ID=gene-AC57_RS06395;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AC57_RS06395;old_locus_tag=AC57_3733 NZ_JJLR01000127.1 Protein Homology CDS 63784 65136 . - 0 ID=cds-WP_001253696.1;Parent=gene-AC57_RS06395;Dbxref=GenBank:WP_001253696.1;Name=WP_001253696.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AC57_RS06395;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_001253696.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 65133 65852 . - . ID=gene-AC57_RS06390;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AC57_RS06390;old_locus_tag=AC57_3734 NZ_JJLR01000127.1 Protein Homology CDS 65133 65852 . - 0 ID=cds-WP_001157751.1;Parent=gene-AC57_RS06390;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AC57_RS06390;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 66080 66556 . + . ID=gene-AC57_RS06385;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AC57_RS06385;old_locus_tag=AC57_3735 NZ_JJLR01000127.1 Protein Homology CDS 66080 66556 . + 0 ID=cds-WP_000856737.1;Parent=gene-AC57_RS06385;Dbxref=GenBank:WP_000856737.1;Name=WP_000856737.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026216.2;locus_tag=AC57_RS06385;product=transcription elongation factor GreB;protein_id=WP_000856737.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 66653 68974 . + . ID=gene-AC57_RS06380;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AC57_RS06380;old_locus_tag=AC57_3736 NZ_JJLR01000127.1 Protein Homology CDS 66653 68974 . + 0 ID=cds-WP_032178120.1;Parent=gene-AC57_RS06380;Dbxref=GenBank:WP_032178120.1;Name=WP_032178120.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417866.4;locus_tag=AC57_RS06380;product=Tex family protein;protein_id=WP_032178120.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 69412 69639 . + . ID=gene-AC57_RS06375;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AC57_RS06375;old_locus_tag=AC57_3737 NZ_JJLR01000127.1 Protein Homology CDS 69412 69639 . + 0 ID=cds-WP_001200455.1;Parent=gene-AC57_RS06375;Dbxref=GenBank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AC57_RS06375;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 69656 71977 . + . ID=gene-AC57_RS06370;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AC57_RS06370;old_locus_tag=AC57_3738 NZ_JJLR01000127.1 Protein Homology CDS 69656 71977 . + 0 ID=cds-WP_000737007.1;Parent=gene-AC57_RS06370;Dbxref=GenBank:WP_000737007.1;Name=WP_000737007.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417868.1;locus_tag=AC57_RS06370;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_000737007.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 71977 72213 . + . ID=gene-AC57_RS06365;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AC57_RS06365;old_locus_tag=AC57_3739 NZ_JJLR01000127.1 Protein Homology CDS 71977 72213 . + 0 ID=cds-WP_000157586.1;Parent=gene-AC57_RS06365;Dbxref=GenBank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AC57_RS06365;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 72416 73294 . + . ID=gene-AC57_RS06360;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AC57_RS06360;old_locus_tag=AC57_3740 NZ_JJLR01000127.1 Protein Homology CDS 72416 73294 . + 0 ID=cds-WP_000039062.1;Parent=gene-AC57_RS06360;Dbxref=GenBank:WP_000039062.1;Name=WP_000039062.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417870.1;locus_tag=AC57_RS06360;product=recombination-promoting nuclease RpnA;protein_id=WP_000039062.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 73323 74093 . - . ID=gene-AC57_RS06355;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AC57_RS06355;old_locus_tag=AC57_3741 NZ_JJLR01000127.1 Protein Homology CDS 73323 74093 . - 0 ID=cds-WP_001060070.1;Parent=gene-AC57_RS06355;Dbxref=GenBank:WP_001060070.1;Name=WP_001060070.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417871.1;locus_tag=AC57_RS06355;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_001060070.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 74131 74814 . + . ID=gene-AC57_RS06350;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AC57_RS06350;old_locus_tag=AC57_3743 NZ_JJLR01000127.1 Protein Homology CDS 74131 74814 . + 0 ID=cds-WP_001333371.1;Parent=gene-AC57_RS06350;Dbxref=GenBank:WP_001333371.1;Name=WP_001333371.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AC57_RS06350;product=DNA utilization protein GntX;protein_id=WP_001333371.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 74873 75448 . + . ID=gene-AC57_RS06345;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AC57_RS06345;old_locus_tag=AC57_3744 NZ_JJLR01000127.1 Protein Homology CDS 74873 75448 . + 0 ID=cds-WP_000619389.1;Parent=gene-AC57_RS06345;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AC57_RS06345;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 75808 77124 . + . ID=gene-AC57_RS06340;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AC57_RS06340;old_locus_tag=AC57_3745 NZ_JJLR01000127.1 Protein Homology CDS 75808 77124 . + 0 ID=cds-WP_001364285.1;Parent=gene-AC57_RS06340;Dbxref=GenBank:WP_001364285.1;Name=WP_001364285.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AC57_RS06340;product=gluconate transporter;protein_id=WP_001364285.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 77235 79319 . - . ID=gene-AC57_RS06335;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AC57_RS06335;old_locus_tag=AC57_3746 NZ_JJLR01000127.1 Protein Homology CDS 77235 79319 . - 0 ID=cds-WP_000444343.1;Parent=gene-AC57_RS06335;Dbxref=GenBank:WP_000444343.1;Name=WP_000444343.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417875.1;locus_tag=AC57_RS06335;product=4-alpha-glucanotransferase;protein_id=WP_000444343.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 79329 81722 . - . ID=gene-AC57_RS06330;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AC57_RS06330;old_locus_tag=AC57_3747 NZ_JJLR01000127.1 Protein Homology CDS 79329 81722 . - 0 ID=cds-WP_000081909.1;Parent=gene-AC57_RS06330;Dbxref=GenBank:WP_000081909.1;Name=WP_000081909.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026218.1;locus_tag=AC57_RS06330;product=maltodextrin phosphorylase;protein_id=WP_000081909.1;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 82334 85039 . + . ID=gene-AC57_RS06325;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AC57_RS06325;old_locus_tag=AC57_3748 NZ_JJLR01000127.1 Protein Homology CDS 82334 85039 . + 0 ID=cds-WP_000906961.1;Parent=gene-AC57_RS06325;Dbxref=GenBank:WP_000906961.1;Name=WP_000906961.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417877.1;locus_tag=AC57_RS06325;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906961.1;transl_table=11 NZ_JJLR01000127.1 RefSeq pseudogene 85082 85456 . - . ID=gene-AC57_RS0125095;Name=AC57_RS0125095;end_range=85456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125095;partial=true;pseudo=true NZ_JJLR01000127.1 Protein Homology CDS 85082 85456 . - 0 ID=cds-AC57_RS0125095;Parent=gene-AC57_RS0125095;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=85456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521479.1;locus_tag=AC57_RS0125095;partial=true;product=RNA 3'-terminal phosphate cyclase;pseudo=true;transl_table=11 NZ_JJLR01000127.1 RefSeq gene 85630 85733 . - . ID=gene-AC57_RS30830;Name=AC57_RS30830;end_range=85733,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30830;partial=true NZ_JJLR01000127.1 Protein Homology CDS 85630 85733 . - 2 ID=cds-WP_024169026.1-2;Parent=gene-AC57_RS30830;Dbxref=GenBank:WP_024169026.1;Name=WP_024169026.1;end_range=85733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30830;partial=true;product=hypothetical protein;protein_id=WP_024169026.1;transl_table=11 ##sequence-region NZ_JJLR01000128.1 1 25820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000128.1 RefSeq region 1 25820 . + . ID=NZ_JJLR01000128.1:1..25820;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000128.1 RefSeq pseudogene 1 152 . - . ID=gene-AC57_RS29985;Name=AC57_RS29985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29985;old_locus_tag=AC57_3750;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000128.1 Protein Homology CDS 1 152 . - 0 ID=cds-AC57_RS29985;Parent=gene-AC57_RS29985;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS29985;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000128.1 RefSeq pseudogene 208 858 . - . ID=gene-AC57_RS06320;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=pseudogene;locus_tag=AC57_RS06320;old_locus_tag=AC57_3751;partial=true;pseudo=true;start_range=.,208 NZ_JJLR01000128.1 Protein Homology CDS 208 858 . - 0 ID=cds-AC57_RS06320;Parent=gene-AC57_RS06320;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026219.1;locus_tag=AC57_RS06320;partial=true;product=RNA 3'-terminal phosphate cyclase;pseudo=true;start_range=.,208;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 862 2088 . - . ID=gene-AC57_RS06315;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AC57_RS06315;old_locus_tag=AC57_3752 NZ_JJLR01000128.1 Protein Homology CDS 862 2088 . - 0 ID=cds-WP_001105502.1;Parent=gene-AC57_RS06315;Dbxref=GenBank:WP_001105502.1;Name=WP_001105502.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AC57_RS06315;product=RNA-splicing ligase RtcB;protein_id=WP_001105502.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 2277 3875 . + . ID=gene-AC57_RS06310;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=AC57_RS06310;old_locus_tag=AC57_3753 NZ_JJLR01000128.1 Protein Homology CDS 2277 3875 . + 0 ID=cds-WP_001618923.1;Parent=gene-AC57_RS06310;Dbxref=GenBank:WP_001618923.1;Name=WP_001618923.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417880.1;locus_tag=AC57_RS06310;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_001618923.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 3857 4615 . - . ID=gene-AC57_RS06305;Name=AC57_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06305;old_locus_tag=AC57_3754 NZ_JJLR01000128.1 Protein Homology CDS 3857 4615 . - 0 ID=cds-WP_000815099.1;Parent=gene-AC57_RS06305;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AC57_RS06305;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 4632 5462 . - . ID=gene-AC57_RS06300;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AC57_RS06300;old_locus_tag=AC57_3755 NZ_JJLR01000128.1 Protein Homology CDS 4632 5462 . - 0 ID=cds-WP_000928731.1;Parent=gene-AC57_RS06300;Dbxref=GenBank:WP_000928731.1;Name=WP_000928731.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026220.1;locus_tag=AC57_RS06300;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_000928731.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 5507 5833 . - . ID=gene-AC57_RS06295;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AC57_RS06295;old_locus_tag=AC57_3756 NZ_JJLR01000128.1 Protein Homology CDS 5507 5833 . - 0 ID=cds-WP_001723994.1;Parent=gene-AC57_RS06295;Dbxref=GenBank:WP_001723994.1;Name=WP_001723994.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AC57_RS06295;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_001723994.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 6023 7528 . + . ID=gene-AC57_RS06290;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AC57_RS06290;old_locus_tag=AC57_3757 NZ_JJLR01000128.1 Protein Homology CDS 6023 7528 . + 0 ID=cds-WP_000448136.1;Parent=gene-AC57_RS06290;Dbxref=GenBank:WP_000448136.1;Name=WP_000448136.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417884.1;locus_tag=AC57_RS06290;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_000448136.1;transl_table=11 NZ_JJLR01000128.1 RefSeq pseudogene 7797 8018 . - . ID=gene-AC57_RS06285;Name=yzgL;gbkey=Gene;gene=yzgL;gene_biotype=pseudogene;locus_tag=AC57_RS06285;old_locus_tag=AC57_3758;partial=true;pseudo=true;start_range=.,7797 NZ_JJLR01000128.1 Protein Homology CDS 7797 8018 . - 0 ID=cds-AC57_RS06285;Parent=gene-AC57_RS06285;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=yzgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312299.2;locus_tag=AC57_RS06285;partial=true;product=protein YzgL;pseudo=true;start_range=.,7797;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 8144 10591 . - . ID=gene-AC57_RS06280;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AC57_RS06280;old_locus_tag=AC57_3760 NZ_JJLR01000128.1 Protein Homology CDS 8144 10591 . - 0 ID=cds-WP_000993449.1;Parent=gene-AC57_RS06280;Dbxref=GenBank:WP_000993449.1;Name=WP_000993449.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AC57_RS06280;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 10610 12043 . - . ID=gene-AC57_RS06275;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AC57_RS06275;old_locus_tag=AC57_3761 NZ_JJLR01000128.1 Protein Homology CDS 10610 12043 . - 0 ID=cds-WP_001197646.1;Parent=gene-AC57_RS06275;Dbxref=GenBank:WP_001197646.1;Name=WP_001197646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AC57_RS06275;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 12043 13338 . - . ID=gene-AC57_RS06270;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AC57_RS06270;old_locus_tag=AC57_3762 NZ_JJLR01000128.1 Protein Homology CDS 12043 13338 . - 0 ID=cds-WP_000253975.1;Parent=gene-AC57_RS06270;Dbxref=GenBank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AC57_RS06270;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 13356 15329 . - . ID=gene-AC57_RS06265;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AC57_RS06265;old_locus_tag=AC57_3763 NZ_JJLR01000128.1 Protein Homology CDS 13356 15329 . - 0 ID=cds-WP_001555179.1;Parent=gene-AC57_RS06265;Dbxref=GenBank:WP_001555179.1;Name=WP_001555179.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=AC57_RS06265;product=glycogen debranching protein GlgX;protein_id=WP_001555179.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 15326 17512 . - . ID=gene-AC57_RS06260;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AC57_RS06260;old_locus_tag=AC57_3764 NZ_JJLR01000128.1 Protein Homology CDS 15326 17512 . - 0 ID=cds-WP_001283723.1;Parent=gene-AC57_RS06260;Dbxref=GenBank:WP_001283723.1;Name=WP_001283723.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=AC57_RS06260;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283723.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 17785 18888 . - . ID=gene-AC57_RS06255;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AC57_RS06255;old_locus_tag=AC57_3765 NZ_JJLR01000128.1 Protein Homology CDS 17785 18888 . - 0 ID=cds-WP_000799956.1;Parent=gene-AC57_RS06255;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AC57_RS06255;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 19081 19674 . + . ID=gene-AC57_RS06250;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AC57_RS06250;old_locus_tag=AC57_3766 NZ_JJLR01000128.1 Protein Homology CDS 19081 19674 . + 0 ID=cds-WP_001002544.1;Parent=gene-AC57_RS06250;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AC57_RS06250;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 19731 21071 . - . ID=gene-AC57_RS06245;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AC57_RS06245;old_locus_tag=AC57_3767 NZ_JJLR01000128.1 Protein Homology CDS 19731 21071 . - 0 ID=cds-WP_000210111.1;Parent=gene-AC57_RS06245;Dbxref=GenBank:WP_000210111.1;Name=WP_000210111.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AC57_RS06245;product=gluconate transporter;protein_id=WP_000210111.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 21075 21602 . - . ID=gene-AC57_RS06240;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AC57_RS06240;old_locus_tag=AC57_3768 NZ_JJLR01000128.1 Protein Homology CDS 21075 21602 . - 0 ID=cds-WP_000108330.1;Parent=gene-AC57_RS06240;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AC57_RS06240;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 21741 22736 . - . ID=gene-AC57_RS06235;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AC57_RS06235;old_locus_tag=AC57_3769 NZ_JJLR01000128.1 Protein Homology CDS 21741 22736 . - 0 ID=cds-WP_001621563.1;Parent=gene-AC57_RS06235;Dbxref=GenBank:WP_001621563.1;Name=WP_001621563.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AC57_RS06235;product=gluconate operon transcriptional repressor GntR;protein_id=WP_001621563.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 22960 23655 . - . ID=gene-AC57_RS06230;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AC57_RS06230;old_locus_tag=AC57_3770 NZ_JJLR01000128.1 Protein Homology CDS 22960 23655 . - 0 ID=cds-WP_000639811.1;Parent=gene-AC57_RS06230;Dbxref=GenBank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AC57_RS06230;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 23778 24815 . - . ID=gene-AC57_RS06225;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AC57_RS06225;old_locus_tag=AC57_3771 NZ_JJLR01000128.1 Protein Homology CDS 23778 24815 . - 0 ID=cds-WP_000236293.1;Parent=gene-AC57_RS06225;Dbxref=GenBank:WP_000236293.1;Name=WP_000236293.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=AC57_RS06225;product=oxidoreductase;protein_id=WP_000236293.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 25148 25630 . + . ID=gene-AC57_RS0125100;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AC57_RS0125100 NZ_JJLR01000128.1 Protein Homology CDS 25148 25630 . + 0 ID=cds-WP_248785412.1;Parent=gene-AC57_RS0125100;Dbxref=GenBank:WP_248785412.1;Name=WP_248785412.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014334077.1;locus_tag=AC57_RS0125100;product=N-acetyltransferase;protein_id=WP_248785412.1;transl_table=11 NZ_JJLR01000128.1 RefSeq gene 25565 25820 . - . ID=gene-AC57_RS27875;Name=AC57_RS27875;end_range=25820,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27875;old_locus_tag=AC57_3772;partial=true NZ_JJLR01000128.1 Protein Homology CDS 25565 25820 . - 1 ID=cds-WP_000363925.1-7;Parent=gene-AC57_RS27875;Dbxref=GenBank:WP_000363925.1;Name=WP_000363925.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=25820,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS27875;partial=true;product=IS1 family transposase;protein_id=WP_000363925.1;transl_table=11 ##sequence-region NZ_JJLR01000129.1 1 35645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000129.1 RefSeq region 1 35645 . + . ID=NZ_JJLR01000129.1:1..35645;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000129.1 RefSeq gene 1 270 . - . ID=gene-AC57_RS06220;Name=AC57_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06220;old_locus_tag=AC57_3773;partial=true;start_range=.,1 NZ_JJLR01000129.1 Protein Homology CDS 1 270 . - 0 ID=cds-WP_000179209.1-4;Parent=gene-AC57_RS06220;Dbxref=GenBank:WP_000179209.1;Name=WP_000179209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS06220;partial=true;product=IS1-like element transposase;protein_id=WP_000179209.1;start_range=.,1;transl_table=11 NZ_JJLR01000129.1 RefSeq pseudogene 326 508 . + . ID=gene-AC57_RS0125105;Name=AC57_RS0125105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125105;partial=true;pseudo=true;start_range=.,326 NZ_JJLR01000129.1 Protein Homology CDS 326 508 . + 0 ID=cds-AC57_RS0125105;Parent=gene-AC57_RS0125105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417903.1;locus_tag=AC57_RS0125105;partial=true;product=YrhB domain-containing protein;pseudo=true;start_range=.,326;transl_table=11 NZ_JJLR01000129.1 RefSeq pseudogene 546 2288 . - . ID=gene-AC57_RS06215;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=AC57_RS06215;old_locus_tag=AC57_3775;pseudo=true NZ_JJLR01000129.1 Protein Homology CDS 546 2288 . - 0 ID=cds-AC57_RS06215;Parent=gene-AC57_RS06215;Note=internal stop;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486198.1;locus_tag=AC57_RS06215;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 2408 2848 . + . ID=gene-AC57_RS06210;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AC57_RS06210;old_locus_tag=AC57_3776 NZ_JJLR01000129.1 Protein Homology CDS 2408 2848 . + 0 ID=cds-WP_000825996.1;Parent=gene-AC57_RS06210;Dbxref=GenBank:WP_000825996.1;Name=WP_000825996.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417905.1;locus_tag=AC57_RS06210;product=DUF2756 family protein;protein_id=WP_000825996.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 2835 3578 . - . ID=gene-AC57_RS06205;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AC57_RS06205;old_locus_tag=AC57_3777 NZ_JJLR01000129.1 Protein Homology CDS 2835 3578 . - 0 ID=cds-WP_000073599.1;Parent=gene-AC57_RS06205;Dbxref=GenBank:WP_000073599.1;Name=WP_000073599.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312322.1;locus_tag=AC57_RS06205;product=glycerophosphodiester phosphodiesterase;protein_id=WP_000073599.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 3575 4645 . - . ID=gene-AC57_RS06200;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AC57_RS06200;old_locus_tag=AC57_3778 NZ_JJLR01000129.1 Protein Homology CDS 3575 4645 . - 0 ID=cds-WP_000907792.1;Parent=gene-AC57_RS06200;Dbxref=GenBank:WP_000907792.1;Name=WP_000907792.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AC57_RS06200;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_000907792.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 4647 5492 . - . ID=gene-AC57_RS06195;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AC57_RS06195;old_locus_tag=AC57_3779 NZ_JJLR01000129.1 Protein Homology CDS 4647 5492 . - 0 ID=cds-WP_000572176.1;Parent=gene-AC57_RS06195;Dbxref=GenBank:WP_000572176.1;Name=WP_000572176.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AC57_RS06195;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_000572176.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 5489 6376 . - . ID=gene-AC57_RS06190;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AC57_RS06190;old_locus_tag=AC57_3780 NZ_JJLR01000129.1 Protein Homology CDS 5489 6376 . - 0 ID=cds-WP_000099289.1;Parent=gene-AC57_RS06190;Dbxref=GenBank:WP_000099289.1;Name=WP_000099289.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AC57_RS06190;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099289.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 6474 7790 . - . ID=gene-AC57_RS06185;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AC57_RS06185;old_locus_tag=AC57_3781 NZ_JJLR01000129.1 Protein Homology CDS 6474 7790 . - 0 ID=cds-WP_000803190.1;Parent=gene-AC57_RS06185;Dbxref=GenBank:WP_000803190.1;Name=WP_000803190.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AC57_RS06185;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803190.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 8187 8900 . - . ID=gene-AC57_RS06180;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AC57_RS06180;old_locus_tag=AC57_3783 NZ_JJLR01000129.1 Protein Homology CDS 8187 8900 . - 0 ID=cds-WP_000416895.1;Parent=gene-AC57_RS06180;Dbxref=GenBank:WP_000416895.1;Name=WP_000416895.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=AC57_RS06180;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416895.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 8902 9669 . - . ID=gene-AC57_RS06175;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AC57_RS06175;old_locus_tag=AC57_3784 NZ_JJLR01000129.1 Protein Homology CDS 8902 9669 . - 0 ID=cds-WP_000082101.1;Parent=gene-AC57_RS06175;Dbxref=GenBank:WP_000082101.1;Name=WP_000082101.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AC57_RS06175;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_000082101.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 9666 10943 . - . ID=gene-AC57_RS06170;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AC57_RS06170;old_locus_tag=AC57_3785 NZ_JJLR01000129.1 Protein Homology CDS 9666 10943 . - 0 ID=cds-WP_000803782.1;Parent=gene-AC57_RS06170;Dbxref=GenBank:WP_000803782.1;Name=WP_000803782.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=AC57_RS06170;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_000803782.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 10940 11866 . - . ID=gene-AC57_RS06165;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AC57_RS06165;old_locus_tag=AC57_3786 NZ_JJLR01000129.1 Protein Homology CDS 10940 11866 . - 0 ID=cds-WP_001295111.1;Parent=gene-AC57_RS06165;Dbxref=GenBank:WP_001295111.1;Name=WP_001295111.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AC57_RS06165;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_001295111.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 11914 13023 . - . ID=gene-AC57_RS06160;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AC57_RS06160;old_locus_tag=AC57_3787 NZ_JJLR01000129.1 Protein Homology CDS 11914 13023 . - 0 ID=cds-WP_000827696.1;Parent=gene-AC57_RS06160;Dbxref=GenBank:WP_000827696.1;Name=WP_000827696.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=AC57_RS06160;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_000827696.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 13447 13830 . + . ID=gene-AC57_RS06155;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AC57_RS06155;old_locus_tag=AC57_3789 NZ_JJLR01000129.1 Protein Homology CDS 13447 13830 . + 0 ID=cds-WP_000778795.1;Parent=gene-AC57_RS06155;Dbxref=GenBank:WP_000778795.1;Name=WP_000778795.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AC57_RS06155;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_000778795.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 14029 15132 . - . ID=gene-AC57_RS06150;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=AC57_RS06150;old_locus_tag=AC57_3790 NZ_JJLR01000129.1 Protein Homology CDS 14029 15132 . - 0 ID=cds-WP_021553940.1;Parent=gene-AC57_RS06150;Dbxref=GenBank:WP_021553940.1;Name=WP_021553940.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AC57_RS06150;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_021553940.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 15402 16256 . - . ID=gene-AC57_RS06145;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AC57_RS06145;old_locus_tag=AC57_3791 NZ_JJLR01000129.1 Protein Homology CDS 15402 16256 . - 0 ID=cds-WP_000130217.1;Parent=gene-AC57_RS06145;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AC57_RS06145;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 16501 17559 . - . ID=gene-AC57_RS06140;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AC57_RS06140;old_locus_tag=AC57_3792 NZ_JJLR01000129.1 Protein Homology CDS 16501 17559 . - 0 ID=cds-WP_001042003.1;Parent=gene-AC57_RS06140;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AC57_RS06140;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 17552 18220 . - . ID=gene-AC57_RS06135;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AC57_RS06135;old_locus_tag=AC57_3793 NZ_JJLR01000129.1 Protein Homology CDS 17552 18220 . - 0 ID=cds-WP_000617726.1;Parent=gene-AC57_RS06135;Dbxref=GenBank:WP_000617726.1;Name=WP_000617726.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AC57_RS06135;product=cell division ATP-binding protein FtsE;protein_id=WP_000617726.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 18223 19719 . - . ID=gene-AC57_RS06130;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AC57_RS06130;old_locus_tag=AC57_3794 NZ_JJLR01000129.1 Protein Homology CDS 18223 19719 . - 0 ID=cds-WP_001040656.1;Parent=gene-AC57_RS06130;Dbxref=GenBank:WP_001040656.1;Name=WP_001040656.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AC57_RS06130;product=signal recognition particle-docking protein FtsY;protein_id=WP_001040656.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 19869 20465 . + . ID=gene-AC57_RS06125;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AC57_RS06125;old_locus_tag=AC57_3795 NZ_JJLR01000129.1 Protein Homology CDS 19869 20465 . + 0 ID=cds-WP_000743181.1;Parent=gene-AC57_RS06125;Dbxref=GenBank:WP_000743181.1;Name=WP_000743181.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AC57_RS06125;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743181.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 20455 20724 . + . ID=gene-AC57_RS06120;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AC57_RS06120;old_locus_tag=AC57_3796 NZ_JJLR01000129.1 Protein Homology CDS 20455 20724 . + 0 ID=cds-WP_001295207.1;Parent=gene-AC57_RS06120;Dbxref=GenBank:WP_001295207.1;Name=WP_001295207.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=AC57_RS06120;product=DUF1145 family protein;protein_id=WP_001295207.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 20727 21086 . - . ID=gene-AC57_RS06115;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=AC57_RS06115;old_locus_tag=AC57_3797 NZ_JJLR01000129.1 Protein Homology CDS 20727 21086 . - 0 ID=cds-WP_000042900.1;Parent=gene-AC57_RS06115;Dbxref=GenBank:WP_000042900.1;Name=WP_000042900.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709237.1;locus_tag=AC57_RS06115;product=DUF2500 domain-containing protein;protein_id=WP_000042900.1;transl_table=11 NZ_JJLR01000129.1 RefSeq pseudogene 21227 21852 . + . ID=gene-AC57_RS0125125;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=pseudogene;locus_tag=AC57_RS0125125;pseudo=true NZ_JJLR01000129.1 Protein Homology CDS 21227 21852 . + 0 ID=cds-AC57_RS0125125;Parent=gene-AC57_RS0125125;Note=frameshifted;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AC57_RS0125125;product=lysoplasmalogenase;pseudo=true;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 21926 24124 . + . ID=gene-AC57_RS06110;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AC57_RS06110;old_locus_tag=AC57_3800 NZ_JJLR01000129.1 Protein Homology CDS 21926 24124 . + 0 ID=cds-WP_032237686.1;Parent=gene-AC57_RS06110;Dbxref=GenBank:WP_032237686.1;Name=WP_032237686.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312345.1;locus_tag=AC57_RS06110;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_032237686.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 24226 24471 . - . ID=gene-AC57_RS06105;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AC57_RS06105;old_locus_tag=AC57_3801 NZ_JJLR01000129.1 Protein Homology CDS 24226 24471 . - 0 ID=cds-WP_000130621.1;Parent=gene-AC57_RS06105;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AC57_RS06105;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 24692 25357 . + . ID=gene-AC57_RS06100;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=AC57_RS06100;old_locus_tag=AC57_3802 NZ_JJLR01000129.1 Protein Homology CDS 24692 25357 . + 0 ID=cds-WP_001103663.1;Parent=gene-AC57_RS06100;Dbxref=GenBank:WP_001103663.1;Name=WP_001103663.1;Ontology_term=GO:1990397;gbkey=CDS;gene=yhhQ;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312347.1;locus_tag=AC57_RS06100;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001103663.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 25430 25987 . + . ID=gene-AC57_RS06095;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AC57_RS06095;old_locus_tag=AC57_3803 NZ_JJLR01000129.1 Protein Homology CDS 25430 25987 . + 0 ID=cds-WP_001245295.1;Parent=gene-AC57_RS06095;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AC57_RS06095;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JJLR01000129.1 RefSeq pseudogene 25991 27208 . - . ID=gene-AC57_RS0125130;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=pseudogene;locus_tag=AC57_RS0125130;old_locus_tag=AC57_3805;pseudo=true NZ_JJLR01000129.1 Protein Homology CDS 25991 27208 . - 0 ID=cds-AC57_RS0125130;Parent=gene-AC57_RS0125130;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yhhS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AC57_RS0125130;product=MFS transporter;pseudo=true;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 27340 28347 . + . ID=gene-AC57_RS06090;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=AC57_RS06090;old_locus_tag=AC57_3806 NZ_JJLR01000129.1 Protein Homology CDS 27340 28347 . + 0 ID=cds-WP_032279841.1;Parent=gene-AC57_RS06090;Dbxref=GenBank:WP_032279841.1;Name=WP_032279841.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709244.1;locus_tag=AC57_RS06090;product=AI-2E family transporter;protein_id=WP_032279841.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 28402 28989 . + . ID=gene-AC57_RS06085;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AC57_RS06085;old_locus_tag=AC57_3807 NZ_JJLR01000129.1 Protein Homology CDS 28402 28989 . + 0 ID=cds-WP_032279840.1;Parent=gene-AC57_RS06085;Dbxref=GenBank:WP_032279840.1;Name=WP_032279840.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312369.1;locus_tag=AC57_RS06085;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_032279840.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 29100 30674 . + . ID=gene-AC57_RS06080;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AC57_RS06080;old_locus_tag=AC57_3808 NZ_JJLR01000129.1 Protein Homology CDS 29100 30674 . + 0 ID=cds-WP_000953353.1;Parent=gene-AC57_RS06080;Dbxref=GenBank:WP_000953353.1;Name=WP_000953353.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417933.1;locus_tag=AC57_RS06080;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953353.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 30674 31618 . + . ID=gene-AC57_RS06075;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AC57_RS06075;old_locus_tag=AC57_3809 NZ_JJLR01000129.1 Protein Homology CDS 30674 31618 . + 0 ID=cds-WP_000947068.1;Parent=gene-AC57_RS06075;Dbxref=GenBank:WP_000947068.1;Name=WP_000947068.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AC57_RS06075;product=nickel ABC transporter permease subunit NikB;protein_id=WP_000947068.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 31615 32448 . + . ID=gene-AC57_RS06070;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AC57_RS06070;old_locus_tag=AC57_3810 NZ_JJLR01000129.1 Protein Homology CDS 31615 32448 . + 0 ID=cds-WP_001008963.1;Parent=gene-AC57_RS06070;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AC57_RS06070;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 32448 33212 . + . ID=gene-AC57_RS06065;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AC57_RS06065;old_locus_tag=AC57_3811 NZ_JJLR01000129.1 Protein Homology CDS 32448 33212 . + 0 ID=cds-WP_001136236.1;Parent=gene-AC57_RS06065;Dbxref=GenBank:WP_001136236.1;Name=WP_001136236.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417936.1;locus_tag=AC57_RS06065;product=nickel import ATP-binding protein NikD;protein_id=WP_001136236.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 33209 34015 . + . ID=gene-AC57_RS06060;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AC57_RS06060;old_locus_tag=AC57_3812 NZ_JJLR01000129.1 Protein Homology CDS 33209 34015 . + 0 ID=cds-WP_000173666.1;Parent=gene-AC57_RS06060;Dbxref=GenBank:WP_000173666.1;Name=WP_000173666.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417937.1;locus_tag=AC57_RS06060;product=nickel import ATP-binding protein NikE;protein_id=WP_000173666.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 34021 34422 . + . ID=gene-AC57_RS06055;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AC57_RS06055;old_locus_tag=AC57_3813 NZ_JJLR01000129.1 Protein Homology CDS 34021 34422 . + 0 ID=cds-WP_001190062.1;Parent=gene-AC57_RS06055;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AC57_RS06055;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JJLR01000129.1 RefSeq gene 34625 35645 . + . ID=gene-AC57_RS06050;Name=AC57_RS06050;end_range=35645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06050;old_locus_tag=AC57_3814;partial=true NZ_JJLR01000129.1 Protein Homology CDS 34625 35645 . + 0 ID=cds-WP_032285645.1-2;Parent=gene-AC57_RS06050;Dbxref=GenBank:WP_032285645.1;Name=WP_032285645.1;end_range=35645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC57_RS06050;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_032285645.1;transl_table=11 ##sequence-region NZ_JJLR01000130.1 1 1149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000130.1 RefSeq region 1 1149 . + . ID=NZ_JJLR01000130.1:1..1149;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000130.1 RefSeq pseudogene 1 854 . + . ID=gene-AC57_RS06045;Name=AC57_RS06045;end_range=854,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS06045;old_locus_tag=AC57_3815;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000130.1 Protein Homology CDS 1 854 . + 2 ID=cds-AC57_RS06045;Parent=gene-AC57_RS06045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC57_RS06045;partial=true;product=RHS element protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000130.1 RefSeq pseudogene 909 1149 . + . ID=gene-AC57_RS06040;Name=AC57_RS06040;end_range=1149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS06040;old_locus_tag=AC57_3816;partial=true;pseudo=true NZ_JJLR01000130.1 Protein Homology CDS 909 1149 . + 0 ID=cds-AC57_RS06040;Parent=gene-AC57_RS06040;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS06040;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000131.1 1 608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000131.1 RefSeq region 1 608 . + . ID=NZ_JJLR01000131.1:1..608;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000131.1 RefSeq gene 1 107 . + . ID=gene-AC57_RS30835;Name=AC57_RS30835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30835;partial=true;start_range=.,1 NZ_JJLR01000131.1 Protein Homology CDS 1 107 . + 2 ID=cds-WP_024202227.1;Parent=gene-AC57_RS30835;Dbxref=GenBank:WP_024202227.1;Name=WP_024202227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30835;partial=true;product=hypothetical protein;protein_id=WP_024202227.1;start_range=.,1;transl_table=11 NZ_JJLR01000131.1 RefSeq pseudogene 278 608 . + . ID=gene-AC57_RS06035;Name=AC57_RS06035;end_range=608,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS06035;old_locus_tag=AC57_3817;partial=true;pseudo=true;start_range=.,278 NZ_JJLR01000131.1 Protein Homology CDS 278 608 . + 0 ID=cds-AC57_RS06035;Parent=gene-AC57_RS06035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=608,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC57_RS06035;partial=true;product=hypothetical protein;pseudo=true;start_range=.,278;transl_table=11 ##sequence-region NZ_JJLR01000132.1 1 24872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000132.1 RefSeq region 1 24872 . + . ID=NZ_JJLR01000132.1:1..24872;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000132.1 RefSeq gene 1 971 . + . ID=gene-AC57_RS06030;Name=AC57_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS06030;old_locus_tag=AC57_3818;partial=true;start_range=.,1 NZ_JJLR01000132.1 Protein Homology CDS 1 971 . + 2 ID=cds-WP_032285737.1;Parent=gene-AC57_RS06030;Dbxref=GenBank:WP_032285737.1;Name=WP_032285737.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC57_RS06030;partial=true;product=ISAs1-like element ISEc1 family transposase;protein_id=WP_032285737.1;start_range=.,1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 1136 2260 . - . ID=gene-AC57_RS06025;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AC57_RS06025;old_locus_tag=AC57_3819 NZ_JJLR01000132.1 Protein Homology CDS 1136 2260 . - 0 ID=cds-WP_001216257.1;Parent=gene-AC57_RS06025;Dbxref=GenBank:WP_001216257.1;Name=WP_001216257.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AC57_RS06025;product=ABC transporter permease;protein_id=WP_001216257.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 2260 4995 . - . ID=gene-AC57_RS06020;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AC57_RS06020;old_locus_tag=AC57_3820 NZ_JJLR01000132.1 Protein Homology CDS 2260 4995 . - 0 ID=cds-WP_032279914.1;Parent=gene-AC57_RS06020;Dbxref=GenBank:WP_032279914.1;Name=WP_032279914.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026225.1;locus_tag=AC57_RS06020;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_032279914.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 4992 6059 . - . ID=gene-AC57_RS06015;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AC57_RS06015;old_locus_tag=AC57_3821 NZ_JJLR01000132.1 Protein Homology CDS 4992 6059 . - 0 ID=cds-WP_032246423.1;Parent=gene-AC57_RS06015;Dbxref=GenBank:WP_032246423.1;Name=WP_032246423.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AC57_RS06015;product=HlyD family secretion protein;protein_id=WP_032246423.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 6122 6235 . - . ID=gene-AC57_RS30560;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AC57_RS30560;old_locus_tag=AC57_3822 NZ_JJLR01000132.1 Protein Homology CDS 6122 6235 . - 0 ID=cds-WP_001296785.1;Parent=gene-AC57_RS30560;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AC57_RS30560;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11 NZ_JJLR01000132.1 RefSeq pseudogene 6425 8048 . - . ID=gene-AC57_RS06010;Name=yhiJ;gbkey=Gene;gene=yhiJ;gene_biotype=pseudogene;locus_tag=AC57_RS06010;old_locus_tag=AC57_3823;pseudo=true NZ_JJLR01000132.1 Protein Homology CDS 6425 8048 . - 0 ID=cds-AC57_RS06010;Parent=gene-AC57_RS06010;Note=frameshifted;gbkey=CDS;gene=yhiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AC57_RS06010;product=YhiJ/YhiL family protein;pseudo=true;transl_table=11 NZ_JJLR01000132.1 RefSeq pseudogene 8310 9916 . - . ID=gene-AC57_RS0125140;Name=AC57_RS0125140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125140;pseudo=true NZ_JJLR01000132.1 Protein Homology CDS 8310 9916 . - 0 ID=cds-AC57_RS0125140;Parent=gene-AC57_RS0125140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248132.1;locus_tag=AC57_RS0125140;product=YhiJ/YhiL family protein;pseudo=true;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 10299 11351 . + . ID=gene-AC57_RS06000;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AC57_RS06000;old_locus_tag=AC57_3828 NZ_JJLR01000132.1 Protein Homology CDS 10299 11351 . + 0 ID=cds-WP_001028905.1;Parent=gene-AC57_RS06000;Dbxref=GenBank:WP_001028905.1;Name=WP_001028905.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AC57_RS06000;product=DUF2776 domain-containing protein;protein_id=WP_001028905.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 11666 12868 . - . ID=gene-AC57_RS05995;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AC57_RS05995;old_locus_tag=AC57_3829 NZ_JJLR01000132.1 Protein Homology CDS 11666 12868 . - 0 ID=cds-WP_032285738.1;Parent=gene-AC57_RS05995;Dbxref=GenBank:WP_032285738.1;Name=WP_032285738.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AC57_RS05995;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_032285738.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 13100 14599 . + . ID=gene-AC57_RS05990;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AC57_RS05990;old_locus_tag=AC57_3830 NZ_JJLR01000132.1 Protein Homology CDS 13100 14599 . + 0 ID=cds-WP_000902780.1;Parent=gene-AC57_RS05990;Dbxref=GenBank:WP_000902780.1;Name=WP_000902780.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AC57_RS05990;product=inorganic phosphate transporter PitA;protein_id=WP_000902780.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 14843 15178 . - . ID=gene-AC57_RS05985;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AC57_RS05985;old_locus_tag=AC57_3831 NZ_JJLR01000132.1 Protein Homology CDS 14843 15178 . - 0 ID=cds-WP_000626187.1;Parent=gene-AC57_RS05985;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AC57_RS05985;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 15569 16003 . + . ID=gene-AC57_RS05980;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AC57_RS05980;old_locus_tag=AC57_3832 NZ_JJLR01000132.1 Protein Homology CDS 15569 16003 . + 0 ID=cds-WP_000323571.1;Parent=gene-AC57_RS05980;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AC57_RS05980;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11 NZ_JJLR01000132.1 RefSeq pseudogene 16080 16145 . - . ID=gene-AC57_RS30565;Name=AC57_RS30565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30565;partial=true;pseudo=true;start_range=.,16080 NZ_JJLR01000132.1 Protein Homology CDS 16080 16145 . - 0 ID=cds-AC57_RS30565;Parent=gene-AC57_RS30565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051204.1;locus_tag=AC57_RS30565;partial=true;product=hypothetical protein;pseudo=true;start_range=.,16080;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 16321 17790 . + . ID=gene-AC57_RS05975;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AC57_RS05975;old_locus_tag=AC57_3834 NZ_JJLR01000132.1 Protein Homology CDS 16321 17790 . + 0 ID=cds-WP_001098652.1;Parent=gene-AC57_RS05975;Dbxref=GenBank:WP_001098652.1;Name=WP_001098652.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417953.1;locus_tag=AC57_RS05975;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098652.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 17839 18591 . - . ID=gene-AC57_RS05970;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AC57_RS05970;old_locus_tag=AC57_3835 NZ_JJLR01000132.1 Protein Homology CDS 17839 18591 . - 0 ID=cds-WP_000686620.1;Parent=gene-AC57_RS05970;Dbxref=GenBank:WP_000686620.1;Name=WP_000686620.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=AC57_RS05970;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686620.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 18599 20641 . - . ID=gene-AC57_RS05965;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AC57_RS05965;old_locus_tag=AC57_3836 NZ_JJLR01000132.1 Protein Homology CDS 18599 20641 . - 0 ID=cds-WP_001298719.1;Parent=gene-AC57_RS05965;Dbxref=GenBank:WP_001298719.1;Name=WP_001298719.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=AC57_RS05965;product=oligopeptidase A;protein_id=WP_001298719.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 20844 21686 . + . ID=gene-AC57_RS05960;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AC57_RS05960;old_locus_tag=AC57_3837 NZ_JJLR01000132.1 Protein Homology CDS 20844 21686 . + 0 ID=cds-WP_001300574.1;Parent=gene-AC57_RS05960;Dbxref=GenBank:WP_001300574.1;Name=WP_001300574.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417956.1;locus_tag=AC57_RS05960;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_001300574.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 21758 23110 . + . ID=gene-AC57_RS05955;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AC57_RS05955;old_locus_tag=AC57_3838 NZ_JJLR01000132.1 Protein Homology CDS 21758 23110 . + 0 ID=cds-WP_000160808.1;Parent=gene-AC57_RS05955;Dbxref=GenBank:WP_000160808.1;Name=WP_000160808.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AC57_RS05955;product=glutathione-disulfide reductase;protein_id=WP_000160808.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 23164 23247 . - . ID=gene-AC57_RS05950;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AC57_RS05950;old_locus_tag=AC57_3839 NZ_JJLR01000132.1 Protein Homology CDS 23164 23247 . - 0 ID=cds-WP_001295215.1;Parent=gene-AC57_RS05950;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AC57_RS05950;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 24218 24571 . + . ID=gene-AC57_RS05945;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AC57_RS05945;old_locus_tag=AC57_3841 NZ_JJLR01000132.1 Protein Homology CDS 24218 24571 . + 0 ID=cds-WP_000008957.1;Parent=gene-AC57_RS05945;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AC57_RS05945;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JJLR01000132.1 RefSeq gene 24625 24872 . + . ID=gene-AC57_RS05940;Name=AC57_RS05940;end_range=24872,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05940;old_locus_tag=AC57_3842;partial=true NZ_JJLR01000132.1 Protein Homology CDS 24625 24872 . + 0 ID=cds-WP_032285739.1;Parent=gene-AC57_RS05940;Dbxref=GenBank:WP_032285739.1;Name=WP_032285739.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;end_range=24872,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AC57_RS05940;partial=true;product=ArsB/NhaD family transporter;protein_id=WP_032285739.1;transl_table=11 ##sequence-region NZ_JJLR01000133.1 1 3944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000133.1 RefSeq region 1 3944 . + . ID=NZ_JJLR01000133.1:1..3944;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000133.1 RefSeq pseudogene 1 196 . + . ID=gene-AC57_RS05935;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=pseudogene;locus_tag=AC57_RS05935;old_locus_tag=AC57_3843;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000133.1 Protein Homology CDS 1 196 . + 1 ID=cds-AC57_RS05935;Parent=gene-AC57_RS05935;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AC57_RS05935;partial=true;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000133.1 RefSeq gene 250 1539 . + . ID=gene-AC57_RS05930;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AC57_RS05930;old_locus_tag=AC57_3844 NZ_JJLR01000133.1 Protein Homology CDS 250 1539 . + 0 ID=cds-WP_000922639.1;Parent=gene-AC57_RS05930;Dbxref=GenBank:WP_000922639.1;Name=WP_000922639.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AC57_RS05930;product=arsenite/antimonite:H(+) antiporter ArsB;protein_id=WP_000922639.1;transl_table=11 NZ_JJLR01000133.1 RefSeq gene 1552 1977 . + . ID=gene-AC57_RS05925;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC57_RS05925;old_locus_tag=AC57_3845 NZ_JJLR01000133.1 Protein Homology CDS 1552 1977 . + 0 ID=cds-WP_000065769.1;Parent=gene-AC57_RS05925;Dbxref=GenBank:WP_000065769.1;Name=WP_000065769.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AC57_RS05925;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_000065769.1;transl_table=11 NZ_JJLR01000133.1 RefSeq pseudogene 2605 3597 . + . ID=gene-AC57_RS05920;Name=AC57_RS05920;end_range=3597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS05920;old_locus_tag=AC57_3847;partial=true;pseudo=true NZ_JJLR01000133.1 Protein Homology CDS 2605 3597 . + 0 ID=cds-AC57_RS05920;Parent=gene-AC57_RS05920;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312403.1;locus_tag=AC57_RS05920;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000133.1 RefSeq pseudogene 3651 3944 . + . ID=gene-AC57_RS0125150;Name=AC57_RS0125150;end_range=3944,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125150;partial=true;pseudo=true NZ_JJLR01000133.1 Protein Homology CDS 3651 3944 . + 0 ID=cds-AC57_RS0125150;Parent=gene-AC57_RS0125150;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=3944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0125150;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000134.1 1 13313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000134.1 RefSeq region 1 13313 . + . ID=NZ_JJLR01000134.1:1..13313;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000134.1 RefSeq pseudogene 1 318 . + . ID=gene-AC57_RS05915;Name=AC57_RS05915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS05915;old_locus_tag=AC57_3849;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000134.1 Protein Homology CDS 1 318 . + 0 ID=cds-AC57_RS05915;Parent=gene-AC57_RS05915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS05915;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000134.1 RefSeq pseudogene 330 468 . + . ID=gene-AC57_RS30840;Name=AC57_RS30840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30840;partial=true;pseudo=true;start_range=.,330 NZ_JJLR01000134.1 Protein Homology CDS 330 468 . + 0 ID=cds-AC57_RS30840;Parent=gene-AC57_RS30840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312403.1;locus_tag=AC57_RS30840;partial=true;product=hypothetical protein;pseudo=true;start_range=.,330;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 823 1389 . + . ID=gene-AC57_RS05910;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AC57_RS05910;old_locus_tag=AC57_3850 NZ_JJLR01000134.1 Protein Homology CDS 823 1389 . + 0 ID=cds-WP_001057453.1;Parent=gene-AC57_RS05910;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AC57_RS05910;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 1545 2075 . + . ID=gene-AC57_RS05905;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=AC57_RS05905;old_locus_tag=AC57_3851 NZ_JJLR01000134.1 Protein Homology CDS 1545 2075 . + 0 ID=cds-WP_000478619.1;Parent=gene-AC57_RS05905;Dbxref=GenBank:WP_000478619.1;Name=WP_000478619.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=dctR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417964.1;locus_tag=AC57_RS05905;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478619.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 2117 2764 . - . ID=gene-AC57_RS05900;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=AC57_RS05900;old_locus_tag=AC57_3852 NZ_JJLR01000134.1 Protein Homology CDS 2117 2764 . - 0 ID=cds-WP_001296814.1;Parent=gene-AC57_RS05900;Dbxref=GenBank:WP_001296814.1;Name=WP_001296814.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AC57_RS05900;product=MgtC/SapB family protein;protein_id=WP_001296814.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 2828 3154 . - . ID=gene-AC57_RS05895;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AC57_RS05895;old_locus_tag=AC57_3853 NZ_JJLR01000134.1 Protein Homology CDS 2828 3154 . - 0 ID=cds-WP_050440087.1;Parent=gene-AC57_RS05895;Dbxref=GenBank:WP_050440087.1;Name=WP_050440087.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AC57_RS05895;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_050440087.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 3270 3602 . - . ID=gene-AC57_RS05890;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AC57_RS05890;old_locus_tag=AC57_3854 NZ_JJLR01000134.1 Protein Homology CDS 3270 3602 . - 0 ID=cds-WP_000756550.1;Parent=gene-AC57_RS05890;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AC57_RS05890;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 3857 4429 . + . ID=gene-AC57_RS05885;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AC57_RS05885;old_locus_tag=AC57_3855 NZ_JJLR01000134.1 Protein Homology CDS 3857 4429 . + 0 ID=cds-WP_032237200.1;Parent=gene-AC57_RS05885;Dbxref=GenBank:WP_032237200.1;Name=WP_032237200.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AC57_RS05885;product=acid-resistance protein HdeD;protein_id=WP_032237200.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 5228 5755 . + . ID=gene-AC57_RS05880;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AC57_RS05880;old_locus_tag=AC57_3856 NZ_JJLR01000134.1 Protein Homology CDS 5228 5755 . + 0 ID=cds-WP_000576690.1;Parent=gene-AC57_RS05880;Dbxref=GenBank:WP_000576690.1;Name=WP_000576690.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AC57_RS05880;product=acid resistance transcriptional activator GadE;protein_id=WP_000576690.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 5756 6034 . - . ID=gene-AC57_RS0125155;Name=AC57_RS0125155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125155 NZ_JJLR01000134.1 Protein Homology CDS 5756 6034 . - 0 ID=cds-WP_001205329.1;Parent=gene-AC57_RS0125155;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AC57_RS0125155;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 6142 7251 . + . ID=gene-AC57_RS05875;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AC57_RS05875;old_locus_tag=AC57_3857 NZ_JJLR01000134.1 Protein Homology CDS 6142 7251 . + 0 ID=cds-WP_001340474.1;Parent=gene-AC57_RS05875;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AC57_RS05875;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 7276 10389 . + . ID=gene-AC57_RS05870;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AC57_RS05870;old_locus_tag=AC57_3858 NZ_JJLR01000134.1 Protein Homology CDS 7276 10389 . + 0 ID=cds-WP_001506351.1;Parent=gene-AC57_RS05870;Dbxref=GenBank:WP_001506351.1;Name=WP_001506351.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AC57_RS05870;product=multidrug efflux pump RND permease MdtF;protein_id=WP_001506351.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 10752 11480 . - . ID=gene-AC57_RS05865;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AC57_RS05865;old_locus_tag=AC57_3859 NZ_JJLR01000134.1 Protein Homology CDS 10752 11480 . - 0 ID=cds-WP_000149999.1;Parent=gene-AC57_RS05865;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AC57_RS05865;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11 NZ_JJLR01000134.1 RefSeq gene 11848 12672 . - . ID=gene-AC57_RS05860;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AC57_RS05860;old_locus_tag=AC57_3860 NZ_JJLR01000134.1 Protein Homology CDS 11848 12672 . - 0 ID=cds-WP_001191059.1;Parent=gene-AC57_RS05860;Dbxref=GenBank:WP_001191059.1;Name=WP_001191059.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417973.1;locus_tag=AC57_RS05860;product=acid resistance transcriptional activator GadX;protein_id=WP_001191059.1;transl_table=11 NZ_JJLR01000134.1 RefSeq pseudogene 13042 13313 . - . ID=gene-AC57_RS05855;Name=AC57_RS05855;end_range=13313,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS05855;old_locus_tag=AC57_3861;partial=true;pseudo=true NZ_JJLR01000134.1 Protein Homology CDS 13042 13313 . - 2 ID=cds-AC57_RS05855;Parent=gene-AC57_RS05855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC57_RS05855;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000135.1 1 94645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000135.1 RefSeq region 1 94645 . + . ID=NZ_JJLR01000135.1:1..94645;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000135.1 RefSeq gene 1 641 . - . ID=gene-AC57_RS05850;Name=AC57_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05850;old_locus_tag=AC57_3862;partial=true;start_range=.,1 NZ_JJLR01000135.1 Protein Homology CDS 1 641 . - 0 ID=cds-WP_001478491.1;Parent=gene-AC57_RS05850;Dbxref=GenBank:WP_001478491.1;Name=WP_001478491.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312424.1;locus_tag=AC57_RS05850;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_001478491.1;start_range=.,1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 852 2249 . - . ID=gene-AC57_RS05845;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AC57_RS05845;old_locus_tag=AC57_3863 NZ_JJLR01000135.1 Protein Homology CDS 852 2249 . - 0 ID=cds-WP_000784827.1;Parent=gene-AC57_RS05845;Dbxref=GenBank:WP_000784827.1;Name=WP_000784827.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417975.1;locus_tag=AC57_RS05845;product=cytochrome c peroxidase;protein_id=WP_000784827.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 2653 4302 . + . ID=gene-AC57_RS05840;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AC57_RS05840;old_locus_tag=AC57_3865 NZ_JJLR01000135.1 Protein Homology CDS 2653 4302 . + 0 ID=cds-WP_000934216.1;Parent=gene-AC57_RS05840;Dbxref=GenBank:WP_000934216.1;Name=WP_000934216.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312426.1;locus_tag=AC57_RS05840;product=alpha%2Calpha-trehalase;protein_id=WP_000934216.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 4353 4955 . - . ID=gene-AC57_RS05835;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=AC57_RS05835;old_locus_tag=AC57_3866 NZ_JJLR01000135.1 Protein Homology CDS 4353 4955 . - 0 ID=cds-WP_001167676.1;Parent=gene-AC57_RS05835;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=yhjB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AC57_RS05835;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 5475 6374 . + . ID=gene-AC57_RS05830;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=AC57_RS05830;old_locus_tag=AC57_3867 NZ_JJLR01000135.1 Protein Homology CDS 5475 6374 . + 0 ID=cds-WP_000357790.1;Parent=gene-AC57_RS05830;Dbxref=GenBank:WP_000357790.1;Name=WP_000357790.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=rcdB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AC57_RS05830;product=LysR family transcriptional regulator;protein_id=WP_000357790.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 6423 7436 . + . ID=gene-AC57_RS05825;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AC57_RS05825;old_locus_tag=AC57_3868 NZ_JJLR01000135.1 Protein Homology CDS 6423 7436 . + 0 ID=cds-WP_000191237.1;Parent=gene-AC57_RS05825;Dbxref=GenBank:WP_000191237.1;Name=WP_000191237.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417979.1;locus_tag=AC57_RS05825;product=inner membrane protein YhjD;protein_id=WP_000191237.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 7847 9169 . + . ID=gene-AC57_RS05820;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=AC57_RS05820;old_locus_tag=AC57_3869 NZ_JJLR01000135.1 Protein Homology CDS 7847 9169 . + 0 ID=cds-WP_001149003.1;Parent=gene-AC57_RS05820;Dbxref=GenBank:WP_001149003.1;Name=WP_001149003.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AC57_RS05820;product=MFS transporter;protein_id=WP_001149003.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 9351 11411 . - . ID=gene-AC57_RS05815;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=AC57_RS05815;old_locus_tag=AC57_3870 NZ_JJLR01000135.1 Protein Homology CDS 9351 11411 . - 0 ID=cds-WP_001296794.1;Parent=gene-AC57_RS05815;Dbxref=GenBank:WP_001296794.1;Name=WP_001296794.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AC57_RS05815;product=AsmA family protein;protein_id=WP_001296794.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 11481 12248 . - . ID=gene-AC57_RS05810;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AC57_RS05810;old_locus_tag=AC57_3871 NZ_JJLR01000135.1 Protein Homology CDS 11481 12248 . - 0 ID=cds-WP_001295219.1;Parent=gene-AC57_RS05810;Dbxref=GenBank:WP_001295219.1;Name=WP_001295219.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AC57_RS05810;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_001295219.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 12480 13409 . + . ID=gene-AC57_RS05805;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AC57_RS05805;old_locus_tag=AC57_3873 NZ_JJLR01000135.1 Protein Homology CDS 12480 13409 . + 0 ID=cds-WP_001300928.1;Parent=gene-AC57_RS05805;Dbxref=GenBank:WP_001300928.1;Name=WP_001300928.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AC57_RS05805;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_001300928.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 13505 15001 . - . ID=gene-AC57_RS05800;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=AC57_RS05800;old_locus_tag=AC57_3874 NZ_JJLR01000135.1 Protein Homology CDS 13505 15001 . - 0 ID=cds-WP_003600790.1;Parent=gene-AC57_RS05800;Dbxref=GenBank:WP_003600790.1;Name=WP_003600790.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=yhjJ;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312434.1;locus_tag=AC57_RS05800;product=M16 family metallopeptidase;protein_id=WP_003600790.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 15221 16507 . - . ID=gene-AC57_RS05795;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AC57_RS05795;old_locus_tag=AC57_3875 NZ_JJLR01000135.1 Protein Homology CDS 15221 16507 . - 0 ID=cds-WP_000858214.1;Parent=gene-AC57_RS05795;Dbxref=GenBank:WP_000858214.1;Name=WP_000858214.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AC57_RS05795;product=C4-dicarboxylate transporter DctC;protein_id=WP_000858214.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 16690 18678 . - . ID=gene-AC57_RS05790;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AC57_RS05790;old_locus_tag=AC57_3877 NZ_JJLR01000135.1 Protein Homology CDS 16690 18678 . - 0 ID=cds-WP_074494985.1;Parent=gene-AC57_RS05790;Dbxref=GenBank:WP_074494985.1;Name=WP_074494985.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AC57_RS05790;product=biofilm formation regulator HmsP;protein_id=WP_074494985.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 18760 22233 . - . ID=gene-AC57_RS05785;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AC57_RS05785;old_locus_tag=AC57_3878 NZ_JJLR01000135.1 Protein Homology CDS 18760 22233 . - 0 ID=cds-WP_001225106.1;Parent=gene-AC57_RS05785;Dbxref=GenBank:WP_001225106.1;Name=WP_001225106.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AC57_RS05785;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_001225106.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 22215 23321 . - . ID=gene-AC57_RS05780;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AC57_RS05780;old_locus_tag=AC57_3879 NZ_JJLR01000135.1 Protein Homology CDS 22215 23321 . - 0 ID=cds-WP_001618937.1;Parent=gene-AC57_RS05780;Dbxref=GenBank:WP_001618937.1;Name=WP_001618937.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=AC57_RS05780;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001618937.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 23328 25667 . - . ID=gene-AC57_RS05775;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AC57_RS05775;old_locus_tag=AC57_3880 NZ_JJLR01000135.1 Protein Homology CDS 23328 25667 . - 0 ID=cds-WP_032285741.1;Parent=gene-AC57_RS05775;Dbxref=GenBank:WP_032285741.1;Name=WP_032285741.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AC57_RS05775;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_032285741.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 25678 28296 . - . ID=gene-AC57_RS05770;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AC57_RS05770;old_locus_tag=AC57_3881 NZ_JJLR01000135.1 Protein Homology CDS 25678 28296 . - 0 ID=cds-WP_000025892.1;Parent=gene-AC57_RS05770;Dbxref=GenBank:WP_000025892.1;Name=WP_000025892.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AC57_RS05770;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_000025892.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 28293 29045 . - . ID=gene-AC57_RS05765;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AC57_RS05765;old_locus_tag=AC57_3882 NZ_JJLR01000135.1 Protein Homology CDS 28293 29045 . - 0 ID=cds-WP_000279528.1;Parent=gene-AC57_RS05765;Dbxref=GenBank:WP_000279528.1;Name=WP_000279528.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AC57_RS05765;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000279528.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 29057 29245 . - . ID=gene-AC57_RS05760;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=AC57_RS05760;old_locus_tag=AC57_3883 NZ_JJLR01000135.1 Protein Homology CDS 29057 29245 . - 0 ID=cds-WP_001063318.1;Parent=gene-AC57_RS05760;Dbxref=GenBank:WP_001063318.1;Name=WP_001063318.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417992.1;locus_tag=AC57_RS05760;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063318.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 29518 31089 . + . ID=gene-AC57_RS05755;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=AC57_RS05755;old_locus_tag=AC57_3884 NZ_JJLR01000135.1 Protein Homology CDS 29518 31089 . + 0 ID=cds-WP_077756458.1;Parent=gene-AC57_RS05755;Dbxref=GenBank:WP_077756458.1;Name=WP_077756458.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709312.1;locus_tag=AC57_RS05755;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_077756458.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 31086 31277 . + . ID=gene-AC57_RS05750;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AC57_RS05750;old_locus_tag=AC57_3885 NZ_JJLR01000135.1 Protein Homology CDS 31086 31277 . + 0 ID=cds-WP_000988308.1;Parent=gene-AC57_RS05750;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AC57_RS05750;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 31274 32953 . + . ID=gene-AC57_RS05745;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AC57_RS05745;old_locus_tag=AC57_3886 NZ_JJLR01000135.1 Protein Homology CDS 31274 32953 . + 0 ID=cds-WP_000191585.1;Parent=gene-AC57_RS05745;Dbxref=GenBank:WP_000191585.1;Name=WP_000191585.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417995.1;locus_tag=AC57_RS05745;product=cellulose biosynthesis protein BcsG;protein_id=WP_000191585.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 33040 33147 . - . ID=gene-AC57_RS26085;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;locus_tag=AC57_RS26085 NZ_JJLR01000135.1 Protein Homology CDS 33040 33147 . - 0 ID=cds-WP_000141634.1;Parent=gene-AC57_RS26085;Dbxref=GenBank:WP_000141634.1;Name=WP_000141634.1;gbkey=CDS;gene=ldrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026227.1;locus_tag=AC57_RS26085;product=type I toxin-antitoxin system toxic polypeptide LdrD;protein_id=WP_000141634.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 33623 34894 . + . ID=gene-AC57_RS05735;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AC57_RS05735;old_locus_tag=AC57_3888 NZ_JJLR01000135.1 Protein Homology CDS 33623 34894 . + 0 ID=cds-WP_001295225.1;Parent=gene-AC57_RS05735;Dbxref=GenBank:WP_001295225.1;Name=WP_001295225.1;Ontology_term=GO:0003333;gbkey=CDS;gene=yhjV;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417996.1;locus_tag=AC57_RS05735;product=aromatic amino acid transport family protein;protein_id=WP_001295225.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 34924 35928 . - . ID=gene-AC57_RS05730;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AC57_RS05730;old_locus_tag=AC57_3889 NZ_JJLR01000135.1 Protein Homology CDS 34924 35928 . - 0 ID=cds-WP_000107012.1;Parent=gene-AC57_RS05730;Dbxref=GenBank:WP_000107012.1;Name=WP_000107012.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417997.1;locus_tag=AC57_RS05730;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107012.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 35925 36908 . - . ID=gene-AC57_RS05725;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AC57_RS05725;old_locus_tag=AC57_3890 NZ_JJLR01000135.1 Protein Homology CDS 35925 36908 . - 0 ID=cds-WP_001196486.1;Parent=gene-AC57_RS05725;Dbxref=GenBank:WP_001196486.1;Name=WP_001196486.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AC57_RS05725;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 36919 37821 . - . ID=gene-AC57_RS05720;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AC57_RS05720;old_locus_tag=AC57_3891 NZ_JJLR01000135.1 Protein Homology CDS 36919 37821 . - 0 ID=cds-WP_000084677.1;Parent=gene-AC57_RS05720;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AC57_RS05720;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 37831 38850 . - . ID=gene-AC57_RS05715;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AC57_RS05715;old_locus_tag=AC57_3892 NZ_JJLR01000135.1 Protein Homology CDS 37831 38850 . - 0 ID=cds-WP_000938855.1;Parent=gene-AC57_RS05715;Dbxref=GenBank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AC57_RS05715;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938855.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 39158 40765 . - . ID=gene-AC57_RS05710;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AC57_RS05710;old_locus_tag=AC57_3894 NZ_JJLR01000135.1 Protein Homology CDS 39158 40765 . - 0 ID=cds-WP_001222883.1;Parent=gene-AC57_RS05710;Dbxref=GenBank:WP_001222883.1;Name=WP_001222883.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418001.1;locus_tag=AC57_RS05710;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222883.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 41508 41584 . - . ID=gene-AC57_RS05705;Name=AC57_RS05705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS05705;old_locus_tag=AC57_3896 NZ_JJLR01000135.1 tRNAscan-SE tRNA 41508 41584 . - . ID=rna-AC57_RS05705;Parent=gene-AC57_RS05705;anticodon=(pos:complement(41548..41550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS05705;product=tRNA-Pro NZ_JJLR01000135.1 tRNAscan-SE exon 41508 41584 . - . ID=exon-AC57_RS05705-1;Parent=rna-AC57_RS05705;anticodon=(pos:complement(41548..41550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS05705;product=tRNA-Pro NZ_JJLR01000135.1 RefSeq gene 41676 43367 . - . ID=gene-AC57_RS05700;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AC57_RS05700;old_locus_tag=AC57_3897 NZ_JJLR01000135.1 Protein Homology CDS 41676 43367 . - 0 ID=cds-WP_001269197.1;Parent=gene-AC57_RS05700;Dbxref=GenBank:WP_001269197.1;Name=WP_001269197.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418002.2;locus_tag=AC57_RS05700;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269197.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 43691 44899 . - . ID=gene-AC57_RS05695;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AC57_RS05695;old_locus_tag=AC57_3898 NZ_JJLR01000135.1 Protein Homology CDS 43691 44899 . - 0 ID=cds-WP_032237205.1;Parent=gene-AC57_RS05695;Dbxref=GenBank:WP_032237205.1;Name=WP_032237205.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418003.1;locus_tag=AC57_RS05695;product=L-lactate MFS transporter;protein_id=WP_032237205.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 45128 45826 . - . ID=gene-AC57_RS05690;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=AC57_RS05690;old_locus_tag=AC57_3899 NZ_JJLR01000135.1 Protein Homology CDS 45128 45826 . - 0 ID=cds-WP_001299523.1;Parent=gene-AC57_RS05690;Dbxref=GenBank:WP_001299523.1;Name=WP_001299523.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418004.4;locus_tag=AC57_RS05690;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_001299523.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 45984 46547 . + . ID=gene-AC57_RS05685;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AC57_RS05685;old_locus_tag=AC57_3900 NZ_JJLR01000135.1 Protein Homology CDS 45984 46547 . + 0 ID=cds-WP_000438953.1;Parent=gene-AC57_RS05685;Dbxref=GenBank:WP_000438953.1;Name=WP_000438953.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418005.1;locus_tag=AC57_RS05685;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438953.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 46544 46984 . + . ID=gene-AC57_RS05680;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AC57_RS05680;old_locus_tag=AC57_3901 NZ_JJLR01000135.1 Protein Homology CDS 46544 46984 . + 0 ID=cds-WP_000617478.1;Parent=gene-AC57_RS05680;Dbxref=GenBank:WP_000617478.1;Name=WP_000617478.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709328.1;locus_tag=AC57_RS05680;product=N-acetyltransferase;protein_id=WP_000617478.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 46953 49286 . - . ID=gene-AC57_RS05675;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AC57_RS05675;old_locus_tag=AC57_3902 NZ_JJLR01000135.1 Protein Homology CDS 46953 49286 . - 0 ID=cds-WP_000013950.1;Parent=gene-AC57_RS05675;Dbxref=GenBank:WP_000013950.1;Name=WP_000013950.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418007.3;locus_tag=AC57_RS05675;product=biotin sulfoxide reductase;protein_id=WP_000013950.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 49439 50098 . + . ID=gene-AC57_RS05670;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AC57_RS05670;old_locus_tag=AC57_3903 NZ_JJLR01000135.1 Protein Homology CDS 49439 50098 . + 0 ID=cds-WP_000747625.1;Parent=gene-AC57_RS05670;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AC57_RS05670;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 50202 51176 . + . ID=gene-AC57_RS05665;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AC57_RS05665;old_locus_tag=AC57_3904 NZ_JJLR01000135.1 Protein Homology CDS 50202 51176 . + 0 ID=cds-WP_000805038.1;Parent=gene-AC57_RS05665;Dbxref=GenBank:WP_000805038.1;Name=WP_000805038.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418009.2;locus_tag=AC57_RS05665;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805038.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 51226 51936 . - . ID=gene-AC57_RS05660;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AC57_RS05660;old_locus_tag=AC57_3905 NZ_JJLR01000135.1 Protein Homology CDS 51226 51936 . - 0 ID=cds-WP_000190516.1;Parent=gene-AC57_RS05660;Dbxref=GenBank:WP_000190516.1;Name=WP_000190516.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AC57_RS05660;product=DUF3053 domain-containing protein;protein_id=WP_000190516.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 52370 52660 . + . ID=gene-AC57_RS05655;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AC57_RS05655;old_locus_tag=AC57_3906 NZ_JJLR01000135.1 Protein Homology CDS 52370 52660 . + 0 ID=cds-WP_000455798.1;Parent=gene-AC57_RS05655;Dbxref=GenBank:WP_000455798.1;Name=WP_000455798.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AC57_RS05655;product=HTH-type transcriptional regulator;protein_id=WP_000455798.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 52941 53153 . + . ID=gene-AC57_RS05650;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC57_RS05650;old_locus_tag=AC57_3907 NZ_JJLR01000135.1 Protein Homology CDS 52941 53153 . + 0 ID=cds-WP_000014594.1;Parent=gene-AC57_RS05650;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AC57_RS05650;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 53292 53363 . + . ID=gene-AC57_RS30570;Name=ysaE;gbkey=Gene;gene=ysaE;gene_biotype=protein_coding;locus_tag=AC57_RS30570 NZ_JJLR01000135.1 Protein Homology CDS 53292 53363 . + 0 ID=cds-WP_211180513.1;Parent=gene-AC57_RS30570;Dbxref=GenBank:WP_211180513.1;Name=WP_211180513.1;gbkey=CDS;gene=ysaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AC57_RS30570;product=protein YsaE;protein_id=WP_211180513.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 53340 53492 . - . ID=gene-AC57_RS05645;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AC57_RS05645;old_locus_tag=AC57_3908 NZ_JJLR01000135.1 Protein Homology CDS 53340 53492 . - 0 ID=cds-WP_001135732.1;Parent=gene-AC57_RS05645;Dbxref=GenBank:WP_001135732.1;Name=WP_001135732.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AC57_RS05645;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_001135732.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 53769 55838 . - . ID=gene-AC57_RS05640;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AC57_RS05640;old_locus_tag=AC57_3909 NZ_JJLR01000135.1 Protein Homology CDS 53769 55838 . - 0 ID=cds-WP_001291772.1;Parent=gene-AC57_RS05640;Dbxref=GenBank:WP_001291772.1;Name=WP_001291772.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AC57_RS05640;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291772.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 55848 56759 . - . ID=gene-AC57_RS05635;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AC57_RS05635;old_locus_tag=AC57_3910 NZ_JJLR01000135.1 Protein Homology CDS 55848 56759 . - 0 ID=cds-WP_001168544.1;Parent=gene-AC57_RS05635;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AC57_RS05635;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 56854 57153 . - . ID=gene-AC57_RS05630;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AC57_RS05630;old_locus_tag=AC57_3911 NZ_JJLR01000135.1 Protein Homology CDS 56854 57153 . - 0 ID=cds-WP_000980107.1;Parent=gene-AC57_RS05630;Dbxref=GenBank:WP_000980107.1;Name=WP_000980107.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588469.1;locus_tag=AC57_RS05630;product=YsaB family lipoprotein;protein_id=WP_000980107.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 57328 58323 . + . ID=gene-AC57_RS05625;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AC57_RS05625;old_locus_tag=AC57_3912 NZ_JJLR01000135.1 Protein Homology CDS 57328 58323 . + 0 ID=cds-WP_001182650.1;Parent=gene-AC57_RS05625;Dbxref=GenBank:WP_001182650.1;Name=WP_001182650.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418018.1;locus_tag=AC57_RS05625;product=O-acetyltransferase WecH;protein_id=WP_001182650.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 58365 58802 . - . ID=gene-AC57_RS05620;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AC57_RS05620;old_locus_tag=AC57_3913 NZ_JJLR01000135.1 Protein Homology CDS 58365 58802 . - 0 ID=cds-WP_001296808.1;Parent=gene-AC57_RS05620;Dbxref=GenBank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AC57_RS05620;product=inner membrane protein YiaA;protein_id=WP_001296808.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 58848 59189 . - . ID=gene-AC57_RS05615;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AC57_RS05615;old_locus_tag=AC57_3914 NZ_JJLR01000135.1 Protein Homology CDS 58848 59189 . - 0 ID=cds-WP_001295228.1;Parent=gene-AC57_RS05615;Dbxref=GenBank:WP_001295228.1;Name=WP_001295228.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418020.2;locus_tag=AC57_RS05615;product=inner membrane protein YiaB;protein_id=WP_001295228.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 59358 60812 . - . ID=gene-AC57_RS05610;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AC57_RS05610;old_locus_tag=AC57_3915 NZ_JJLR01000135.1 Protein Homology CDS 59358 60812 . - 0 ID=cds-WP_001414268.1;Parent=gene-AC57_RS05610;Dbxref=GenBank:WP_001414268.1;Name=WP_001414268.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418021.1;locus_tag=AC57_RS05610;product=xylulokinase;protein_id=WP_001414268.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 60884 62206 . - . ID=gene-AC57_RS05605;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AC57_RS05605;old_locus_tag=AC57_3916 NZ_JJLR01000135.1 Protein Homology CDS 60884 62206 . - 0 ID=cds-WP_001149591.1;Parent=gene-AC57_RS05605;Dbxref=GenBank:WP_001149591.1;Name=WP_001149591.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418022.1;locus_tag=AC57_RS05605;product=xylose isomerase;protein_id=WP_001149591.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 62572 63564 . + . ID=gene-AC57_RS05600;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AC57_RS05600;old_locus_tag=AC57_3917 NZ_JJLR01000135.1 Protein Homology CDS 62572 63564 . + 0 ID=cds-WP_000694881.1;Parent=gene-AC57_RS05600;Dbxref=GenBank:WP_000694881.1;Name=WP_000694881.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=AC57_RS05600;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_000694881.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 63642 65183 . + . ID=gene-AC57_RS05595;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AC57_RS05595;old_locus_tag=AC57_3918 NZ_JJLR01000135.1 Protein Homology CDS 63642 65183 . + 0 ID=cds-WP_001146479.1;Parent=gene-AC57_RS05595;Dbxref=GenBank:WP_001146479.1;Name=WP_001146479.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AC57_RS05595;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146479.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 65161 66342 . + . ID=gene-AC57_RS05590;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AC57_RS05590;old_locus_tag=AC57_3919 NZ_JJLR01000135.1 Protein Homology CDS 65161 66342 . + 0 ID=cds-WP_000045978.1;Parent=gene-AC57_RS05590;Dbxref=GenBank:WP_000045978.1;Name=WP_000045978.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AC57_RS05590;product=xylose ABC transporter permease XylH;protein_id=WP_000045978.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 66420 67598 . + . ID=gene-AC57_RS05585;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AC57_RS05585;old_locus_tag=AC57_3920 NZ_JJLR01000135.1 Protein Homology CDS 66420 67598 . + 0 ID=cds-WP_000494484.1;Parent=gene-AC57_RS05585;Dbxref=GenBank:WP_000494484.1;Name=WP_000494484.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AC57_RS05585;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_000494484.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 67794 68618 . - . ID=gene-AC57_RS0125180;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AC57_RS0125180;old_locus_tag=AC57_3921 NZ_JJLR01000135.1 Protein Homology CDS 67794 68618 . - 0 ID=cds-WP_001297957.1;Parent=gene-AC57_RS0125180;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AC57_RS0125180;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 68938 70968 . + . ID=gene-AC57_RS05580;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AC57_RS05580;old_locus_tag=AC57_3923 NZ_JJLR01000135.1 Protein Homology CDS 68938 70968 . + 0 ID=cds-WP_000761225.1;Parent=gene-AC57_RS05580;Dbxref=GenBank:WP_000761225.1;Name=WP_000761225.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418028.1;locus_tag=AC57_RS05580;product=alpha-amylase;protein_id=WP_000761225.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 71146 72399 . + . ID=gene-AC57_RS05575;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=AC57_RS05575;old_locus_tag=AC57_3924 NZ_JJLR01000135.1 Protein Homology CDS 71146 72399 . + 0 ID=cds-WP_001699334.1;Parent=gene-AC57_RS05575;Dbxref=GenBank:WP_001699334.1;Name=WP_001699334.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026231.1;locus_tag=AC57_RS05575;product=valine--pyruvate transaminase;protein_id=WP_001699334.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 72550 73023 . - . ID=gene-AC57_RS05570;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AC57_RS05570;old_locus_tag=AC57_3925 NZ_JJLR01000135.1 Protein Homology CDS 72550 73023 . - 0 ID=cds-WP_032279521.1;Parent=gene-AC57_RS05570;Dbxref=GenBank:WP_032279521.1;Name=WP_032279521.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312483.1;locus_tag=AC57_RS05570;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_032279521.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 73125 73973 . - . ID=gene-AC57_RS05565;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=AC57_RS05565;old_locus_tag=AC57_3926 NZ_JJLR01000135.1 Protein Homology CDS 73125 73973 . - 0 ID=cds-WP_001547885.1;Parent=gene-AC57_RS05565;Dbxref=GenBank:WP_001547885.1;Name=WP_001547885.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AC57_RS05565;product=IclR family transcriptional regulator YiaJ;protein_id=WP_001547885.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 74174 75172 . + . ID=gene-AC57_RS05560;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=AC57_RS05560;old_locus_tag=AC57_3927 NZ_JJLR01000135.1 Protein Homology CDS 74174 75172 . + 0 ID=cds-WP_000869037.1;Parent=gene-AC57_RS05560;Dbxref=GenBank:WP_000869037.1;Name=WP_000869037.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418032.1;locus_tag=AC57_RS05560;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_000869037.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 75184 75651 . + . ID=gene-AC57_RS05555;Name=yiaL;gbkey=Gene;gene=yiaL;gene_biotype=protein_coding;locus_tag=AC57_RS05555;old_locus_tag=AC57_3928 NZ_JJLR01000135.1 Protein Homology CDS 75184 75651 . + 0 ID=cds-WP_000576077.1;Parent=gene-AC57_RS05555;Dbxref=GenBank:WP_000576077.1;Name=WP_000576077.1;gbkey=CDS;gene=yiaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418033.1;locus_tag=AC57_RS05555;product=YhcH/YjgK/YiaL family protein;protein_id=WP_000576077.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 75769 76242 . + . ID=gene-AC57_RS05550;Name=yiaM;gbkey=Gene;gene=yiaM;gene_biotype=protein_coding;locus_tag=AC57_RS05550;old_locus_tag=AC57_3929 NZ_JJLR01000135.1 Protein Homology CDS 75769 76242 . + 0 ID=cds-WP_000721664.1;Parent=gene-AC57_RS05550;Dbxref=GenBank:WP_000721664.1;Name=WP_000721664.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaM;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418034.1;locus_tag=AC57_RS05550;product=2%2C3-diketo-L-gulonate TRAP transporter small permease YiaM;protein_id=WP_000721664.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 76245 77522 . + . ID=gene-AC57_RS05545;Name=yiaN;gbkey=Gene;gene=yiaN;gene_biotype=protein_coding;locus_tag=AC57_RS05545;old_locus_tag=AC57_3930 NZ_JJLR01000135.1 Protein Homology CDS 76245 77522 . + 0 ID=cds-WP_032267795.1;Parent=gene-AC57_RS05545;Dbxref=GenBank:WP_032267795.1;Name=WP_032267795.1;Ontology_term=GO:0031317;gbkey=CDS;gene=yiaN;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026232.1;locus_tag=AC57_RS05545;product=2%2C3-diketo-L-gulonate TRAP transporter large permease YiaN;protein_id=WP_032267795.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 77535 78521 . + . ID=gene-AC57_RS05540;Name=yiaO;gbkey=Gene;gene=yiaO;gene_biotype=protein_coding;locus_tag=AC57_RS05540;old_locus_tag=AC57_3931 NZ_JJLR01000135.1 Protein Homology CDS 77535 78521 . + 0 ID=cds-WP_032246250.1;Parent=gene-AC57_RS05540;Dbxref=GenBank:WP_032246250.1;Name=WP_032246250.1;gbkey=CDS;gene=yiaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418036.1;locus_tag=AC57_RS05540;product=2%2C3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO;protein_id=WP_032246250.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 78525 80021 . + . ID=gene-AC57_RS05535;Name=lyxK;gbkey=Gene;gene=lyxK;gene_biotype=protein_coding;locus_tag=AC57_RS05535;old_locus_tag=AC57_3932 NZ_JJLR01000135.1 Protein Homology CDS 78525 80021 . + 0 ID=cds-WP_000196054.1;Parent=gene-AC57_RS05535;Dbxref=GenBank:WP_000196054.1;Name=WP_000196054.1;gbkey=CDS;gene=lyxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418037.1;locus_tag=AC57_RS05535;product=L-xylulokinase;protein_id=WP_000196054.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 80018 80680 . + . ID=gene-AC57_RS05530;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AC57_RS05530;old_locus_tag=AC57_3933 NZ_JJLR01000135.1 Protein Homology CDS 80018 80680 . + 0 ID=cds-WP_000089481.1;Parent=gene-AC57_RS05530;Dbxref=GenBank:WP_000089481.1;Name=WP_000089481.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418038.1;locus_tag=AC57_RS05530;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000089481.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 80673 81533 . + . ID=gene-AC57_RS05525;Name=sgbU;gbkey=Gene;gene=sgbU;gene_biotype=protein_coding;locus_tag=AC57_RS05525;old_locus_tag=AC57_3934 NZ_JJLR01000135.1 Protein Homology CDS 80673 81533 . + 0 ID=cds-WP_001424391.1;Parent=gene-AC57_RS05525;Dbxref=GenBank:WP_001424391.1;Name=WP_001424391.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;gene=sgbU;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418039.2;locus_tag=AC57_RS05525;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_001424391.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 81527 82222 . + . ID=gene-AC57_RS05520;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AC57_RS05520;old_locus_tag=AC57_3935 NZ_JJLR01000135.1 Protein Homology CDS 81527 82222 . + 0 ID=cds-WP_000893119.1;Parent=gene-AC57_RS05520;Dbxref=GenBank:WP_000893119.1;Name=WP_000893119.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=AC57_RS05520;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000893119.1;transl_table=11 NZ_JJLR01000135.1 RefSeq pseudogene 82254 82355 . - . ID=gene-AC57_RS30465;Name=AC57_RS30465;end_range=82355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30465;partial=true;pseudo=true NZ_JJLR01000135.1 Protein Homology CDS 82254 82355 . - 0 ID=cds-AC57_RS30465;Parent=gene-AC57_RS30465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=82355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=AC57_RS30465;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLR01000135.1 RefSeq pseudogene 82359 82547 . + . ID=gene-AC57_RS30845;Name=AC57_RS30845;end_range=82547,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30845;partial=true;pseudo=true;start_range=.,82359 NZ_JJLR01000135.1 Protein Homology CDS 82359 82547 . + 0 ID=cds-AC57_RS30845;Parent=gene-AC57_RS30845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=82547,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=AC57_RS30845;partial=true;product=hypothetical protein;pseudo=true;start_range=.,82359;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 82569 83309 . - . ID=gene-AC57_RS05515;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=AC57_RS05515;old_locus_tag=AC57_3937 NZ_JJLR01000135.1 Protein Homology CDS 82569 83309 . - 0 ID=cds-WP_000906806.1;Parent=gene-AC57_RS05515;Dbxref=GenBank:WP_000906806.1;Name=WP_000906806.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;gene=yiaT;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312487.1;locus_tag=AC57_RS05515;product=MipA/OmpV family protein;protein_id=WP_000906806.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 83433 84407 . + . ID=gene-AC57_RS05510;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=AC57_RS05510;old_locus_tag=AC57_3938 NZ_JJLR01000135.1 Protein Homology CDS 83433 84407 . + 0 ID=cds-WP_000164036.1;Parent=gene-AC57_RS05510;Dbxref=GenBank:WP_000164036.1;Name=WP_000164036.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiaU;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418042.1;locus_tag=AC57_RS05510;product=LysR family transcriptional regulator;protein_id=WP_000164036.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 84404 85540 . - . ID=gene-AC57_RS05505;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;locus_tag=AC57_RS05505;old_locus_tag=AC57_3939 NZ_JJLR01000135.1 Protein Homology CDS 84404 85540 . - 0 ID=cds-WP_000364884.1;Parent=gene-AC57_RS05505;Dbxref=GenBank:WP_000364884.1;Name=WP_000364884.1;gbkey=CDS;gene=yiaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418043.1;locus_tag=AC57_RS05505;product=HlyD family secretion protein;protein_id=WP_000364884.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 85546 85869 . - . ID=gene-AC57_RS05500;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=AC57_RS05500;old_locus_tag=AC57_3940 NZ_JJLR01000135.1 Protein Homology CDS 85546 85869 . - 0 ID=cds-WP_000478195.1;Parent=gene-AC57_RS05500;Dbxref=GenBank:WP_000478195.1;Name=WP_000478195.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AC57_RS05500;product=DUF3302 domain-containing protein;protein_id=WP_000478195.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 86052 86195 . + . ID=gene-AC57_RS30345;Name=AC57_RS30345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30345;old_locus_tag=AC57_3941 NZ_JJLR01000135.1 GeneMarkS-2+ CDS 86052 86195 . + 0 ID=cds-WP_001066080.1;Parent=gene-AC57_RS30345;Dbxref=GenBank:WP_001066080.1;Name=WP_001066080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30345;product=hypothetical protein;protein_id=WP_001066080.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 86414 87952 . - . ID=gene-AC57_RS05490;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=AC57_RS05490;old_locus_tag=AC57_3942 NZ_JJLR01000135.1 Protein Homology CDS 86414 87952 . - 0 ID=cds-WP_000183980.1;Parent=gene-AC57_RS05490;Dbxref=GenBank:WP_000183980.1;Name=WP_000183980.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AC57_RS05490;product=aldehyde dehydrogenase AldB;protein_id=WP_000183980.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 88117 89268 . - . ID=gene-AC57_RS05485;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AC57_RS05485;old_locus_tag=AC57_3943 NZ_JJLR01000135.1 Protein Homology CDS 88117 89268 . - 0 ID=cds-WP_032246470.1;Parent=gene-AC57_RS05485;Dbxref=GenBank:WP_032246470.1;Name=WP_032246470.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=AC57_RS05485;product=L-threonine dehydrogenase;protein_id=WP_032246470.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 89458 91302 . - . ID=gene-AC57_RS05480;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AC57_RS05480;old_locus_tag=AC57_3944 NZ_JJLR01000135.1 Protein Homology CDS 89458 91302 . - 0 ID=cds-WP_032285742.1;Parent=gene-AC57_RS05480;Dbxref=GenBank:WP_032285742.1;Name=WP_032285742.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AC57_RS05480;product=selenocysteine-specific translation elongation factor;protein_id=WP_032285742.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 91299 92690 . - . ID=gene-AC57_RS05475;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AC57_RS05475;old_locus_tag=AC57_3945 NZ_JJLR01000135.1 Protein Homology CDS 91299 92690 . - 0 ID=cds-WP_032246468.1;Parent=gene-AC57_RS05475;Dbxref=GenBank:WP_032246468.1;Name=WP_032246468.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AC57_RS05475;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_032246468.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 92788 93396 . - . ID=gene-AC57_RS05470;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AC57_RS05470;old_locus_tag=AC57_3946 NZ_JJLR01000135.1 Protein Homology CDS 92788 93396 . - 0 ID=cds-WP_000779792.1;Parent=gene-AC57_RS05470;Dbxref=GenBank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AC57_RS05470;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_JJLR01000135.1 RefSeq gene 93625 94645 . + . ID=gene-AC57_RS05465;Name=AC57_RS05465;end_range=94645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05465;old_locus_tag=AC57_3948;partial=true NZ_JJLR01000135.1 Protein Homology CDS 93625 94645 . + 0 ID=cds-WP_032285645.1-3;Parent=gene-AC57_RS05465;Dbxref=GenBank:WP_032285645.1;Name=WP_032285645.1;end_range=94645,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC57_RS05465;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_032285645.1;transl_table=11 ##sequence-region NZ_JJLR01000136.1 1 143301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000136.1 RefSeq region 1 143301 . + . ID=NZ_JJLR01000136.1:1..143301;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000136.1 RefSeq gene 1 112 . + . ID=gene-AC57_RS30850;Name=AC57_RS30850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30850;partial=true;start_range=.,1 NZ_JJLR01000136.1 Protein Homology CDS 1 112 . + 1 ID=cds-WP_024202419.1-2;Parent=gene-AC57_RS30850;Dbxref=GenBank:WP_024202419.1;Name=WP_024202419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30850;partial=true;product=hypothetical protein;protein_id=WP_024202419.1;start_range=.,1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 283 1266 . + . ID=gene-AC57_RS0125200;Name=AC57_RS0125200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125200;old_locus_tag=AC57_3949;partial=true;pseudo=true;start_range=.,283 NZ_JJLR01000136.1 Protein Homology CDS 283 1266 . + 0 ID=cds-AC57_RS0125200;Parent=gene-AC57_RS0125200;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC57_RS0125200;partial=true;product=polymorphic toxin type 34 domain-containing protein;pseudo=true;start_range=.,283;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 1287 2129 . + . ID=gene-AC57_RS05460;Name=yibA;gbkey=Gene;gene=yibA;gene_biotype=protein_coding;locus_tag=AC57_RS05460;old_locus_tag=AC57_3950 NZ_JJLR01000136.1 Protein Homology CDS 1287 2129 . + 0 ID=cds-WP_032279410.1;Parent=gene-AC57_RS05460;Dbxref=GenBank:WP_032279410.1;Name=WP_032279410.1;gbkey=CDS;gene=yibA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418051.1;locus_tag=AC57_RS05460;product=HEAT repeat domain-containing protein;protein_id=WP_032279410.1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 2159 3115 . + . ID=gene-AC57_RS05455;Name=AC57_RS05455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS05455;old_locus_tag=AC57_3951;partial=true;pseudo=true;start_range=.,2159 NZ_JJLR01000136.1 Protein Homology CDS 2159 3115 . + 0 ID=cds-AC57_RS05455;Parent=gene-AC57_RS05455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312497.1;locus_tag=AC57_RS05455;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2159;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 3127 3588 . + . ID=gene-AC57_RS0125205;Name=yibG;gbkey=Gene;gene=yibG;gene_biotype=protein_coding;locus_tag=AC57_RS0125205 NZ_JJLR01000136.1 Protein Homology CDS 3127 3588 . + 0 ID=cds-WP_000642489.1;Parent=gene-AC57_RS0125205;Dbxref=GenBank:WP_000642489.1;Name=WP_000642489.1;gbkey=CDS;gene=yibG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418053.1;locus_tag=AC57_RS0125205;product=sel1 repeat family protein;protein_id=WP_000642489.1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 3622 3840 . + . ID=gene-AC57_RS31270;Name=AC57_RS31270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31270;partial=true;pseudo=true;start_range=.,3622 NZ_JJLR01000136.1 Protein Homology CDS 3622 3840 . + 0 ID=cds-AC57_RS31270;Parent=gene-AC57_RS31270;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235166.1;locus_tag=AC57_RS31270;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,3622;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 4212 4732 . + . ID=gene-AC57_RS0125210;Name=AC57_RS0125210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125210;pseudo=true NZ_JJLR01000136.1 Protein Homology CDS 4212 4732 . + 0 ID=cds-AC57_RS0125210;Parent=gene-AC57_RS0125210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626253.1;locus_tag=AC57_RS0125210;product=Imm57 family immunity protein;pseudo=true;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 5192 6328 . - . ID=gene-AC57_RS05450;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AC57_RS05450;old_locus_tag=AC57_3952 NZ_JJLR01000136.1 Protein Homology CDS 5192 6328 . - 0 ID=cds-WP_032279411.1;Parent=gene-AC57_RS05450;Dbxref=GenBank:WP_032279411.1;Name=WP_032279411.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709371.1;locus_tag=AC57_RS05450;product=HlyD family secretion protein;protein_id=WP_032279411.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 6331 6693 . - . ID=gene-AC57_RS0125215;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AC57_RS0125215 NZ_JJLR01000136.1 Protein Homology CDS 6331 6693 . - 0 ID=cds-WP_000479626.1;Parent=gene-AC57_RS0125215;Dbxref=GenBank:WP_000479626.1;Name=WP_000479626.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312501.1;locus_tag=AC57_RS0125215;product=DUF3302 domain-containing protein;protein_id=WP_000479626.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 7229 9142 . + . ID=gene-AC57_RS05445;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AC57_RS05445;old_locus_tag=AC57_3955 NZ_JJLR01000136.1 Protein Homology CDS 7229 9142 . + 0 ID=cds-WP_000093247.1;Parent=gene-AC57_RS05445;Dbxref=GenBank:WP_000093247.1;Name=WP_000093247.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418056.1;locus_tag=AC57_RS05445;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093247.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 9372 10520 . + . ID=gene-AC57_RS05440;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AC57_RS05440;old_locus_tag=AC57_3956 NZ_JJLR01000136.1 Protein Homology CDS 9372 10520 . + 0 ID=cds-WP_000645420.1;Parent=gene-AC57_RS05440;Dbxref=GenBank:WP_000645420.1;Name=WP_000645420.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418057.1;locus_tag=AC57_RS05440;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_000645420.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 10520 11107 . + . ID=gene-AC57_RS05435;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AC57_RS05435;old_locus_tag=AC57_3957 NZ_JJLR01000136.1 Protein Homology CDS 10520 11107 . + 0 ID=cds-WP_000228269.1;Parent=gene-AC57_RS05435;Dbxref=GenBank:WP_000228269.1;Name=WP_000228269.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418058.1;locus_tag=AC57_RS05435;product=mannitol operon repressor MtlR;protein_id=WP_000228269.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 11119 11328 . - . ID=gene-AC57_RS05430;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AC57_RS05430;old_locus_tag=AC57_3958 NZ_JJLR01000136.1 Protein Homology CDS 11119 11328 . - 0 ID=cds-WP_000517100.1;Parent=gene-AC57_RS05430;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AC57_RS05430;product=protein YibT;protein_id=WP_000517100.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 11613 11975 . + . ID=gene-AC57_RS05425;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AC57_RS05425;old_locus_tag=AC57_3959 NZ_JJLR01000136.1 Protein Homology CDS 11613 11975 . + 0 ID=cds-WP_016237590.1;Parent=gene-AC57_RS05425;Dbxref=GenBank:WP_016237590.1;Name=WP_016237590.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AC57_RS05425;product=YibL family ribosome-associated protein;protein_id=WP_016237590.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 12349 14004 . + . ID=gene-AC57_RS05420;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AC57_RS05420;old_locus_tag=AC57_3960 NZ_JJLR01000136.1 Protein Homology CDS 12349 14004 . + 0 ID=cds-WP_001297977.1;Parent=gene-AC57_RS05420;Dbxref=GenBank:WP_001297977.1;Name=WP_001297977.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=AC57_RS05420;product=L-lactate permease;protein_id=WP_001297977.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 14004 14780 . + . ID=gene-AC57_RS05415;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AC57_RS05415;old_locus_tag=AC57_3961 NZ_JJLR01000136.1 Protein Homology CDS 14004 14780 . + 0 ID=cds-WP_000636500.1;Parent=gene-AC57_RS05415;Dbxref=GenBank:WP_000636500.1;Name=WP_000636500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AC57_RS05415;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 14777 15967 . + . ID=gene-AC57_RS05410;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AC57_RS05410;old_locus_tag=AC57_3962 NZ_JJLR01000136.1 Protein Homology CDS 14777 15967 . + 0 ID=cds-WP_000586962.1;Parent=gene-AC57_RS05410;Dbxref=GenBank:WP_000586962.1;Name=WP_000586962.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418062.1;locus_tag=AC57_RS05410;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586962.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 16167 16640 . + . ID=gene-AC57_RS05405;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AC57_RS05405;old_locus_tag=AC57_3963 NZ_JJLR01000136.1 Protein Homology CDS 16167 16640 . + 0 ID=cds-WP_000932347.1;Parent=gene-AC57_RS05405;Dbxref=GenBank:WP_000932347.1;Name=WP_000932347.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418063.1;locus_tag=AC57_RS05405;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932347.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 16693 17514 . - . ID=gene-AC57_RS05400;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AC57_RS05400;old_locus_tag=AC57_3964 NZ_JJLR01000136.1 Protein Homology CDS 16693 17514 . - 0 ID=cds-WP_001277561.1;Parent=gene-AC57_RS05400;Dbxref=GenBank:WP_001277561.1;Name=WP_001277561.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AC57_RS05400;product=serine O-acetyltransferase;protein_id=WP_001277561.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 17594 18613 . - . ID=gene-AC57_RS05395;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AC57_RS05395;old_locus_tag=AC57_3965 NZ_JJLR01000136.1 Protein Homology CDS 17594 18613 . - 0 ID=cds-WP_001076194.1;Parent=gene-AC57_RS05395;Dbxref=GenBank:WP_001076194.1;Name=WP_001076194.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AC57_RS05395;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001076194.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 18613 19080 . - . ID=gene-AC57_RS05390;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AC57_RS05390;old_locus_tag=AC57_3966 NZ_JJLR01000136.1 Protein Homology CDS 18613 19080 . - 0 ID=cds-WP_000003377.1;Parent=gene-AC57_RS05390;Dbxref=GenBank:WP_000003377.1;Name=WP_000003377.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AC57_RS05390;product=protein-export chaperone SecB;protein_id=WP_000003377.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 19143 19394 . - . ID=gene-AC57_RS05385;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AC57_RS05385;old_locus_tag=AC57_3967 NZ_JJLR01000136.1 Protein Homology CDS 19143 19394 . - 0 ID=cds-WP_000024392.1;Parent=gene-AC57_RS05385;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AC57_RS05385;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 19536 19967 . - . ID=gene-AC57_RS05380;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AC57_RS05380;old_locus_tag=AC57_3968 NZ_JJLR01000136.1 Protein Homology CDS 19536 19967 . - 0 ID=cds-WP_001156181.1;Parent=gene-AC57_RS05380;Dbxref=GenBank:WP_001156181.1;Name=WP_001156181.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AC57_RS05380;product=rhodanese-like domain-containing protein;protein_id=WP_001156181.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 20212 21756 . + . ID=gene-AC57_RS05375;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AC57_RS05375;old_locus_tag=AC57_3970 NZ_JJLR01000136.1 Protein Homology CDS 20212 21756 . + 0 ID=cds-WP_001350558.1;Parent=gene-AC57_RS05375;Dbxref=GenBank:WP_001350558.1;Name=WP_001350558.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418069.1;locus_tag=AC57_RS05375;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_001350558.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 21790 23049 . + . ID=gene-AC57_RS05370;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AC57_RS05370;old_locus_tag=AC57_3971 NZ_JJLR01000136.1 Protein Homology CDS 21790 23049 . + 0 ID=cds-WP_001399503.1;Parent=gene-AC57_RS05370;Dbxref=GenBank:WP_001399503.1;Name=WP_001399503.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AC57_RS05370;product=murein hydrolase activator EnvC;protein_id=WP_001399503.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 23053 24012 . + . ID=gene-AC57_RS05365;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AC57_RS05365;old_locus_tag=AC57_3972 NZ_JJLR01000136.1 Protein Homology CDS 23053 24012 . + 0 ID=cds-WP_000483848.1;Parent=gene-AC57_RS05365;Dbxref=GenBank:WP_000483848.1;Name=WP_000483848.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418071.4;locus_tag=AC57_RS05365;product=divergent polysaccharide deacetylase family protein;protein_id=WP_000483848.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 23999 25033 . - . ID=gene-AC57_RS05360;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AC57_RS05360;old_locus_tag=AC57_3973 NZ_JJLR01000136.1 Protein Homology CDS 23999 25033 . - 0 ID=cds-WP_000982090.1;Parent=gene-AC57_RS05360;Dbxref=GenBank:WP_000982090.1;Name=WP_000982090.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000982090.1;locus_tag=AC57_RS05360;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982090.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 25272 26297 . - . ID=gene-AC57_RS05355;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AC57_RS05355;old_locus_tag=AC57_3974 NZ_JJLR01000136.1 Protein Homology CDS 25272 26297 . - 0 ID=cds-WP_000646007.1;Parent=gene-AC57_RS05355;Dbxref=GenBank:WP_000646007.1;Name=WP_000646007.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AC57_RS05355;product=L-threonine 3-dehydrogenase;protein_id=WP_000646007.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 26307 27503 . - . ID=gene-AC57_RS05350;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AC57_RS05350;old_locus_tag=AC57_3975 NZ_JJLR01000136.1 Protein Homology CDS 26307 27503 . - 0 ID=cds-WP_001213834.1;Parent=gene-AC57_RS05350;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AC57_RS05350;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 27778 28635 . - . ID=gene-AC57_RS05345;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=AC57_RS05345;old_locus_tag=AC57_3976 NZ_JJLR01000136.1 Protein Homology CDS 27778 28635 . - 0 ID=cds-WP_024238962.1;Parent=gene-AC57_RS05345;Dbxref=GenBank:WP_024238962.1;Name=WP_024238962.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709398.1;locus_tag=AC57_RS05345;product=protein YibB;protein_id=WP_024238962.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 28939 29871 . + . ID=gene-AC57_RS05340;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AC57_RS05340;old_locus_tag=AC57_3977 NZ_JJLR01000136.1 Protein Homology CDS 28939 29871 . + 0 ID=cds-WP_000587764.1;Parent=gene-AC57_RS05340;Dbxref=GenBank:WP_000587764.1;Name=WP_000587764.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AC57_RS05340;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_000587764.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 29881 30927 . + . ID=gene-AC57_RS05335;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AC57_RS05335;old_locus_tag=AC57_3978 NZ_JJLR01000136.1 Protein Homology CDS 29881 30927 . + 0 ID=cds-WP_000699219.1;Parent=gene-AC57_RS05335;Dbxref=GenBank:WP_000699219.1;Name=WP_000699219.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418077.1;locus_tag=AC57_RS05335;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_000699219.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 30931 31923 . + . ID=gene-AC57_RS05330;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AC57_RS05330;old_locus_tag=AC57_3979 NZ_JJLR01000136.1 Protein Homology CDS 30931 31923 . + 0 ID=cds-WP_032236935.1;Parent=gene-AC57_RS05330;Dbxref=GenBank:WP_032236935.1;Name=WP_032236935.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312526.1;locus_tag=AC57_RS05330;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_032236935.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 31920 33128 . + . ID=gene-AC57_RS05325;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=AC57_RS05325;old_locus_tag=AC57_3980 NZ_JJLR01000136.1 Protein Homology CDS 31920 33128 . + 0 ID=cds-WP_000204742.1;Parent=gene-AC57_RS05325;Dbxref=GenBank:WP_000204742.1;Name=WP_000204742.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312527.1;locus_tag=AC57_RS05325;product=O-antigen ligase RfaL;protein_id=WP_000204742.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 33164 34306 . - . ID=gene-AC57_RS05320;Name=AC57_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05320;old_locus_tag=AC57_3981 NZ_JJLR01000136.1 Protein Homology CDS 33164 34306 . - 0 ID=cds-WP_000227811.1;Parent=gene-AC57_RS05320;Dbxref=GenBank:WP_000227811.1;Name=WP_000227811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312528.1;locus_tag=AC57_RS05320;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_000227811.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 34315 35328 . - . ID=gene-AC57_RS05315;Name=AC57_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05315;old_locus_tag=AC57_3982 NZ_JJLR01000136.1 Protein Homology CDS 34315 35328 . - 0 ID=cds-WP_000346017.1;Parent=gene-AC57_RS05315;Dbxref=GenBank:WP_000346017.1;Name=WP_000346017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312529.1;locus_tag=AC57_RS05315;product=UDP-glucose--(galactosyl) LPS alpha1%2C2-glucosyltransferase;protein_id=WP_000346017.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 35353 36060 . - . ID=gene-AC57_RS05310;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AC57_RS05310;old_locus_tag=AC57_3983 NZ_JJLR01000136.1 Protein Homology CDS 35353 36060 . - 0 ID=cds-WP_000639946.1;Parent=gene-AC57_RS05310;Dbxref=GenBank:WP_000639946.1;Name=WP_000639946.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709405.1;locus_tag=AC57_RS05310;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000639946.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 36086 37093 . - . ID=gene-AC57_RS05305;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AC57_RS05305;old_locus_tag=AC57_3984 NZ_JJLR01000136.1 Protein Homology CDS 36086 37093 . - 0 ID=cds-WP_032236936.1;Parent=gene-AC57_RS05305;Dbxref=GenBank:WP_032236936.1;Name=WP_032236936.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457454.1;locus_tag=AC57_RS05305;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_032236936.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 37136 37933 . - . ID=gene-AC57_RS05300;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AC57_RS05300;old_locus_tag=AC57_3985 NZ_JJLR01000136.1 Protein Homology CDS 37136 37933 . - 0 ID=cds-WP_001724065.1;Parent=gene-AC57_RS05300;Dbxref=GenBank:WP_001724065.1;Name=WP_001724065.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AC57_RS05300;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001724065.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 37926 39050 . - . ID=gene-AC57_RS05295;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=AC57_RS05295;old_locus_tag=AC57_3986 NZ_JJLR01000136.1 Protein Homology CDS 37926 39050 . - 0 ID=cds-WP_000634264.1;Parent=gene-AC57_RS05295;Dbxref=GenBank:WP_000634264.1;Name=WP_000634264.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=waaG;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AC57_RS05295;product=glycosyltransferase family 4 protein;protein_id=WP_000634264.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 39047 40105 . - . ID=gene-AC57_RS05290;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AC57_RS05290;old_locus_tag=AC57_3987 NZ_JJLR01000136.1 Protein Homology CDS 39047 40105 . - 0 ID=cds-WP_000360402.1;Parent=gene-AC57_RS05290;Dbxref=GenBank:WP_000360402.1;Name=WP_000360402.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AC57_RS05290;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_000360402.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 40518 41795 . + . ID=gene-AC57_RS05285;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AC57_RS05285;old_locus_tag=AC57_3988 NZ_JJLR01000136.1 Protein Homology CDS 40518 41795 . + 0 ID=cds-WP_000891564.1;Parent=gene-AC57_RS05285;Dbxref=GenBank:WP_000891564.1;Name=WP_000891564.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AC57_RS05285;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_000891564.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 41803 42282 . + . ID=gene-AC57_RS05280;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AC57_RS05280;old_locus_tag=AC57_3989 NZ_JJLR01000136.1 Protein Homology CDS 41803 42282 . + 0 ID=cds-WP_001171866.1;Parent=gene-AC57_RS05280;Dbxref=GenBank:WP_001171866.1;Name=WP_001171866.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AC57_RS05280;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171866.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 42321 43130 . - . ID=gene-AC57_RS05275;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AC57_RS05275;old_locus_tag=AC57_3990 NZ_JJLR01000136.1 Protein Homology CDS 42321 43130 . - 0 ID=cds-WP_001114543.1;Parent=gene-AC57_RS05275;Dbxref=GenBank:WP_001114543.1;Name=WP_001114543.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418092.1;locus_tag=AC57_RS05275;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001114543.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 43228 43395 . - . ID=gene-AC57_RS05270;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AC57_RS05270;old_locus_tag=AC57_3991 NZ_JJLR01000136.1 Protein Homology CDS 43228 43395 . - 0 ID=cds-WP_001051798.1;Parent=gene-AC57_RS05270;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AC57_RS05270;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 43416 43652 . - . ID=gene-AC57_RS05265;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AC57_RS05265;old_locus_tag=AC57_3992 NZ_JJLR01000136.1 Protein Homology CDS 43416 43652 . - 0 ID=cds-WP_000091955.1;Parent=gene-AC57_RS05265;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AC57_RS05265;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 43869 44537 . - . ID=gene-AC57_RS05260;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AC57_RS05260;old_locus_tag=AC57_3993 NZ_JJLR01000136.1 Protein Homology CDS 43869 44537 . - 0 ID=cds-WP_032267769.1;Parent=gene-AC57_RS05260;Dbxref=GenBank:WP_032267769.1;Name=WP_032267769.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418095.4;locus_tag=AC57_RS05260;product=RadC family protein;protein_id=WP_032267769.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 44709 45929 . + . ID=gene-AC57_RS05255;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AC57_RS05255;old_locus_tag=AC57_3994 NZ_JJLR01000136.1 Protein Homology CDS 44709 45929 . + 0 ID=cds-WP_032279416.1;Parent=gene-AC57_RS05255;Dbxref=GenBank:WP_032279416.1;Name=WP_032279416.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AC57_RS05255;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_032279416.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 45907 46365 . + . ID=gene-AC57_RS05250;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AC57_RS05250;old_locus_tag=AC57_3995 NZ_JJLR01000136.1 Protein Homology CDS 45907 46365 . + 0 ID=cds-WP_032279417.1;Parent=gene-AC57_RS05250;Dbxref=GenBank:WP_032279417.1;Name=WP_032279417.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AC57_RS05250;product=dUTP diphosphatase;protein_id=WP_032279417.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 46472 47068 . + . ID=gene-AC57_RS05245;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AC57_RS05245;old_locus_tag=AC57_3996 NZ_JJLR01000136.1 Protein Homology CDS 46472 47068 . + 0 ID=cds-WP_000818601.1;Parent=gene-AC57_RS05245;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AC57_RS05245;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 47105 47746 . - . ID=gene-AC57_RS05240;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AC57_RS05240;old_locus_tag=AC57_3997 NZ_JJLR01000136.1 Protein Homology CDS 47105 47746 . - 0 ID=cds-WP_001472532.1;Parent=gene-AC57_RS05240;Dbxref=GenBank:WP_001472532.1;Name=WP_001472532.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AC57_RS05240;product=orotate phosphoribosyltransferase;protein_id=WP_001472532.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 47812 48528 . - . ID=gene-AC57_RS05235;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AC57_RS05235;old_locus_tag=AC57_3998 NZ_JJLR01000136.1 Protein Homology CDS 47812 48528 . - 0 ID=cds-WP_001247089.1;Parent=gene-AC57_RS05235;Dbxref=GenBank:WP_001247089.1;Name=WP_001247089.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AC57_RS05235;product=ribonuclease PH;protein_id=WP_001247089.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 48655 49518 . + . ID=gene-AC57_RS05230;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AC57_RS05230;old_locus_tag=AC57_3999 NZ_JJLR01000136.1 Protein Homology CDS 48655 49518 . + 0 ID=cds-WP_000621336.1;Parent=gene-AC57_RS05230;Dbxref=GenBank:WP_000621336.1;Name=WP_000621336.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AC57_RS05230;product=YicC/YloC family endoribonuclease;protein_id=WP_000621336.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 49708 50961 . + . ID=gene-AC57_RS05225;Name=AC57_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05225;old_locus_tag=AC57_4000 NZ_JJLR01000136.1 Protein Homology CDS 49708 50961 . + 0 ID=cds-WP_032236938.1;Parent=gene-AC57_RS05225;Dbxref=GenBank:WP_032236938.1;Name=WP_032236938.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231265.1;locus_tag=AC57_RS05225;product=tyrosine-type recombinase/integrase;protein_id=WP_032236938.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 50980 51930 . + . ID=gene-AC57_RS05220;Name=AC57_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05220;old_locus_tag=AC57_4001 NZ_JJLR01000136.1 Protein Homology CDS 50980 51930 . + 0 ID=cds-WP_032236939.1;Parent=gene-AC57_RS05220;Dbxref=GenBank:WP_032236939.1;Name=WP_032236939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231264.1;locus_tag=AC57_RS05220;product=hypothetical protein;protein_id=WP_032236939.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 52037 52240 . + . ID=gene-AC57_RS05215;Name=AC57_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05215;old_locus_tag=AC57_4002 NZ_JJLR01000136.1 Protein Homology CDS 52037 52240 . + 0 ID=cds-WP_032236940.1;Parent=gene-AC57_RS05215;Dbxref=GenBank:WP_032236940.1;Name=WP_032236940.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018038.1;locus_tag=AC57_RS05215;product=helix-turn-helix transcriptional regulator;protein_id=WP_032236940.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 52240 52674 . + . ID=gene-AC57_RS05210;Name=AC57_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05210;old_locus_tag=AC57_4003 NZ_JJLR01000136.1 Protein Homology CDS 52240 52674 . + 0 ID=cds-WP_023063312.1;Parent=gene-AC57_RS05210;Dbxref=GenBank:WP_023063312.1;Name=WP_023063312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535037.1;locus_tag=AC57_RS05210;product=hypothetical protein;protein_id=WP_023063312.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 52687 53520 . + . ID=gene-AC57_RS05205;Name=AC57_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05205;old_locus_tag=AC57_4004 NZ_JJLR01000136.1 Protein Homology CDS 52687 53520 . + 0 ID=cds-WP_032236942.1;Parent=gene-AC57_RS05205;Dbxref=GenBank:WP_032236942.1;Name=WP_032236942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244012.1;locus_tag=AC57_RS05205;product=antA/AntB antirepressor family protein;protein_id=WP_032236942.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 53513 53695 . + . ID=gene-AC57_RS0125225;Name=AC57_RS0125225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125225 NZ_JJLR01000136.1 Protein Homology CDS 53513 53695 . + 0 ID=cds-WP_001244025.1;Parent=gene-AC57_RS0125225;Dbxref=GenBank:WP_001244025.1;Name=WP_001244025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001244025.1;locus_tag=AC57_RS0125225;product=DUF4222 domain-containing protein;protein_id=WP_001244025.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 53682 54593 . + . ID=gene-AC57_RS29325;Name=AC57_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29325;old_locus_tag=AC57_4005 NZ_JJLR01000136.1 Protein Homology CDS 53682 54593 . + 0 ID=cds-WP_106416725.1;Parent=gene-AC57_RS29325;Dbxref=GenBank:WP_106416725.1;Name=WP_106416725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244013.1;locus_tag=AC57_RS29325;product=host cell division inhibitor Icd-like protein;protein_id=WP_106416725.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 54586 54765 . + . ID=gene-AC57_RS05200;Name=AC57_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05200;old_locus_tag=AC57_4006 NZ_JJLR01000136.1 Protein Homology CDS 54586 54765 . + 0 ID=cds-WP_016244014.1;Parent=gene-AC57_RS05200;Dbxref=GenBank:WP_016244014.1;Name=WP_016244014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935907.1;locus_tag=AC57_RS05200;product=hypothetical protein;protein_id=WP_016244014.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 54762 55025 . + . ID=gene-AC57_RS05195;Name=AC57_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05195;old_locus_tag=AC57_4007 NZ_JJLR01000136.1 Protein Homology CDS 54762 55025 . + 0 ID=cds-WP_032236943.1;Parent=gene-AC57_RS05195;Dbxref=GenBank:WP_032236943.1;Name=WP_032236943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244015.1;locus_tag=AC57_RS05195;product=hypothetical protein;protein_id=WP_032236943.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 55080 55421 . + . ID=gene-AC57_RS05190;Name=AC57_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05190;old_locus_tag=AC57_4008 NZ_JJLR01000136.1 Protein Homology CDS 55080 55421 . + 0 ID=cds-WP_032236944.1;Parent=gene-AC57_RS05190;Dbxref=GenBank:WP_032236944.1;Name=WP_032236944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000628964.1;locus_tag=AC57_RS05190;product=hypothetical protein;protein_id=WP_032236944.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 55414 57855 . + . ID=gene-AC57_RS05185;Name=AC57_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05185;old_locus_tag=AC57_4009 NZ_JJLR01000136.1 Protein Homology CDS 55414 57855 . + 0 ID=cds-WP_032236945.1;Parent=gene-AC57_RS05185;Dbxref=GenBank:WP_032236945.1;Name=WP_032236945.1;Ontology_term=GO:0006260,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001565833.1;locus_tag=AC57_RS05185;product=phage/plasmid primase%2C P4 family;protein_id=WP_032236945.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 58321 58494 . + . ID=gene-AC57_RS30355;Name=AC57_RS30355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30355;old_locus_tag=AC57_4011 NZ_JJLR01000136.1 Protein Homology CDS 58321 58494 . + 0 ID=cds-WP_001565834.1;Parent=gene-AC57_RS30355;Dbxref=GenBank:WP_001565834.1;Name=WP_001565834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001565834.1;locus_tag=AC57_RS30355;product=hypothetical protein;protein_id=WP_001565834.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 58494 59165 . + . ID=gene-AC57_RS05180;Name=AC57_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05180;old_locus_tag=AC57_4012 NZ_JJLR01000136.1 Protein Homology CDS 58494 59165 . + 0 ID=cds-WP_025491782.1;Parent=gene-AC57_RS05180;Dbxref=GenBank:WP_025491782.1;Name=WP_025491782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000500881.1;locus_tag=AC57_RS05180;product=hypothetical protein;protein_id=WP_025491782.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 59379 59660 . + . ID=gene-AC57_RS0125240;Name=AC57_RS0125240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125240 NZ_JJLR01000136.1 Protein Homology CDS 59379 59660 . + 0 ID=cds-WP_032236946.1;Parent=gene-AC57_RS0125240;Dbxref=GenBank:WP_032236946.1;Name=WP_032236946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617443.1;locus_tag=AC57_RS0125240;product=PerC family transcriptional regulator;protein_id=WP_032236946.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 59795 59980 . + . ID=gene-AC57_RS30855;Name=AC57_RS30855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30855 NZ_JJLR01000136.1 Protein Homology CDS 59795 59980 . + 0 ID=cds-WP_000188903.1;Parent=gene-AC57_RS30855;Dbxref=GenBank:WP_000188903.1;Name=WP_000188903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000188903.1;locus_tag=AC57_RS30855;product=hypothetical protein;protein_id=WP_000188903.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 60101 60643 . + . ID=gene-AC57_RS05175;Name=AC57_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05175;old_locus_tag=AC57_4015 NZ_JJLR01000136.1 Protein Homology CDS 60101 60643 . + 0 ID=cds-WP_000284450.1;Parent=gene-AC57_RS05175;Dbxref=GenBank:WP_000284450.1;Name=WP_000284450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244020.1;locus_tag=AC57_RS05175;product=plasmid pRiA4b ORF-3 family protein;protein_id=WP_000284450.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 60636 60995 . - . ID=gene-AC57_RS05170;Name=AC57_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS05170;old_locus_tag=AC57_4016 NZ_JJLR01000136.1 Protein Homology CDS 60636 60995 . - 0 ID=cds-WP_024186516.1;Parent=gene-AC57_RS05170;Dbxref=GenBank:WP_024186516.1;Name=WP_024186516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405000.1;locus_tag=AC57_RS05170;product=hypothetical protein;protein_id=WP_024186516.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 61130 61954 . + . ID=gene-AC57_RS05165;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AC57_RS05165;old_locus_tag=AC57_4017 NZ_JJLR01000136.1 Protein Homology CDS 61130 61954 . + 0 ID=cds-WP_021548889.1;Parent=gene-AC57_RS05165;Dbxref=GenBank:WP_021548889.1;Name=WP_021548889.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312547.2;locus_tag=AC57_RS05165;product=DNA damage-inducible protein D;protein_id=WP_021548889.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 62305 63129 . + . ID=gene-AC57_RS05160;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AC57_RS05160;old_locus_tag=AC57_4019 NZ_JJLR01000136.1 Protein Homology CDS 62305 63129 . + 0 ID=cds-WP_001424418.1;Parent=gene-AC57_RS05160;Dbxref=GenBank:WP_001424418.1;Name=WP_001424418.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312547.2;locus_tag=AC57_RS05160;product=DNA damage-inducible protein D;protein_id=WP_001424418.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 63420 64037 . + . ID=gene-AC57_RS05155;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AC57_RS05155;old_locus_tag=AC57_4020 NZ_JJLR01000136.1 Protein Homology CDS 63420 64037 . + 0 ID=cds-WP_000924289.1;Parent=gene-AC57_RS05155;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AC57_RS05155;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 64034 65716 . - . ID=gene-AC57_RS05150;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AC57_RS05150;old_locus_tag=AC57_4021 NZ_JJLR01000136.1 Protein Homology CDS 64034 65716 . - 0 ID=cds-WP_000870047.1;Parent=gene-AC57_RS05150;Dbxref=GenBank:WP_000870047.1;Name=WP_000870047.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418104.2;locus_tag=AC57_RS05150;product=NAD-dependent DNA ligase LigB;protein_id=WP_000870047.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 65974 66597 . + . ID=gene-AC57_RS05145;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AC57_RS05145;old_locus_tag=AC57_4023 NZ_JJLR01000136.1 Protein Homology CDS 65974 66597 . + 0 ID=cds-WP_001295237.1;Parent=gene-AC57_RS05145;Dbxref=GenBank:WP_001295237.1;Name=WP_001295237.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AC57_RS05145;product=guanylate kinase;protein_id=WP_001295237.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 66652 66927 . + . ID=gene-AC57_RS05140;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AC57_RS05140;old_locus_tag=AC57_4024 NZ_JJLR01000136.1 Protein Homology CDS 66652 66927 . + 0 ID=cds-WP_000135058.1;Parent=gene-AC57_RS05140;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AC57_RS05140;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 66946 69054 . + . ID=gene-AC57_RS05135;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AC57_RS05135;old_locus_tag=AC57_4025 NZ_JJLR01000136.1 Protein Homology CDS 66946 69054 . + 0 ID=cds-WP_000280488.1;Parent=gene-AC57_RS05135;Dbxref=GenBank:WP_000280488.1;Name=WP_000280488.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AC57_RS05135;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280488.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 69061 69750 . + . ID=gene-AC57_RS05130;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AC57_RS05130;old_locus_tag=AC57_4026 NZ_JJLR01000136.1 Protein Homology CDS 69061 69750 . + 0 ID=cds-WP_001070177.1;Parent=gene-AC57_RS05130;Dbxref=GenBank:WP_001070177.1;Name=WP_001070177.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AC57_RS05130;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070177.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 69756 71837 . + . ID=gene-AC57_RS05125;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AC57_RS05125;old_locus_tag=AC57_4027 NZ_JJLR01000136.1 Protein Homology CDS 69756 71837 . + 0 ID=cds-WP_032236948.1;Parent=gene-AC57_RS05125;Dbxref=GenBank:WP_032236948.1;Name=WP_032236948.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418109.1;locus_tag=AC57_RS05125;product=ATP-dependent DNA helicase RecG;protein_id=WP_032236948.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 72006 73211 . - . ID=gene-AC57_RS05120;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AC57_RS05120;old_locus_tag=AC57_4028 NZ_JJLR01000136.1 Protein Homology CDS 72006 73211 . - 0 ID=cds-WP_000468833.1;Parent=gene-AC57_RS05120;Dbxref=GenBank:WP_000468833.1;Name=WP_000468833.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418110.1;locus_tag=AC57_RS05120;product=sodium/glutamate symporter;protein_id=WP_000468833.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 73491 74882 . + . ID=gene-AC57_RS05115;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AC57_RS05115;old_locus_tag=AC57_4029 NZ_JJLR01000136.1 Protein Homology CDS 73491 74882 . + 0 ID=cds-WP_001295238.1;Parent=gene-AC57_RS05115;Dbxref=GenBank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AC57_RS05115;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 75003 76685 . + . ID=gene-AC57_RS05110;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AC57_RS05110;old_locus_tag=AC57_4030 NZ_JJLR01000136.1 Protein Homology CDS 75003 76685 . + 0 ID=cds-WP_032236949.1;Parent=gene-AC57_RS05110;Dbxref=GenBank:WP_032236949.1;Name=WP_032236949.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000668607.1;locus_tag=AC57_RS05110;product=AsmA family protein;protein_id=WP_032236949.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 76765 79083 . - . ID=gene-AC57_RS05105;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AC57_RS05105;old_locus_tag=AC57_4031 NZ_JJLR01000136.1 Protein Homology CDS 76765 79083 . - 0 ID=cds-WP_000702898.1;Parent=gene-AC57_RS05105;Dbxref=GenBank:WP_000702898.1;Name=WP_000702898.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AC57_RS05105;product=alpha-xylosidase;protein_id=WP_000702898.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 79093 80475 . - . ID=gene-AC57_RS05100;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AC57_RS05100;old_locus_tag=AC57_4032 NZ_JJLR01000136.1 Protein Homology CDS 79093 80475 . - 0 ID=cds-WP_000834439.1;Parent=gene-AC57_RS05100;Dbxref=GenBank:WP_000834439.1;Name=WP_000834439.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AC57_RS05100;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_000834439.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 80768 80862 . + . ID=gene-AC57_RS05095;Name=AC57_RS05095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS05095;old_locus_tag=AC57_4033 NZ_JJLR01000136.1 tRNAscan-SE tRNA 80768 80862 . + . ID=rna-AC57_RS05095;Parent=gene-AC57_RS05095;anticodon=(pos:80802..80804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS05095;product=tRNA-Sec NZ_JJLR01000136.1 tRNAscan-SE exon 80768 80862 . + . ID=exon-AC57_RS05095-1;Parent=rna-AC57_RS05095;anticodon=(pos:80802..80804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS05095;product=tRNA-Sec NZ_JJLR01000136.1 RefSeq pseudogene 80941 81102 . + . ID=gene-AC57_RS30860;Name=rhuM;end_range=81102,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AC57_RS30860;old_locus_tag=AC57_4034;partial=true;pseudo=true;start_range=.,80941 NZ_JJLR01000136.1 Protein Homology CDS 80941 81102 . + 0 ID=cds-AC57_RS30860;Parent=gene-AC57_RS30860;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=81102,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000774140.1;locus_tag=AC57_RS30860;partial=true;product=RhuM family protein;pseudo=true;start_range=.,80941;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 81499 82683 . + . ID=gene-AC57_RS05085;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AC57_RS05085;old_locus_tag=AC57_4035 NZ_JJLR01000136.1 Protein Homology CDS 81499 82683 . + 0 ID=cds-WP_001172876.1;Parent=gene-AC57_RS05085;Dbxref=GenBank:WP_001172876.1;Name=WP_001172876.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AC57_RS05085;product=sugar efflux transporter;protein_id=WP_001172876.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 82794 83717 . + . ID=gene-AC57_RS05080;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AC57_RS05080;old_locus_tag=AC57_4036 NZ_JJLR01000136.1 Protein Homology CDS 82794 83717 . + 0 ID=cds-WP_000535959.1;Parent=gene-AC57_RS05080;Dbxref=GenBank:WP_000535959.1;Name=WP_000535959.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312621.1;locus_tag=AC57_RS05080;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535959.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 83721 84539 . - . ID=gene-AC57_RS05075;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AC57_RS05075;old_locus_tag=AC57_4037 NZ_JJLR01000136.1 Protein Homology CDS 83721 84539 . - 0 ID=cds-WP_032236950.1;Parent=gene-AC57_RS05075;Dbxref=GenBank:WP_032236950.1;Name=WP_032236950.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AC57_RS05075;product=lipoprotein NlpA;protein_id=WP_032236950.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 84761 85054 . + . ID=gene-AC57_RS05065;Name=yicS;gbkey=Gene;gene=yicS;gene_biotype=protein_coding;locus_tag=AC57_RS05065;old_locus_tag=AC57_4039 NZ_JJLR01000136.1 Protein Homology CDS 84761 85054 . + 0 ID=cds-WP_000805509.1;Parent=gene-AC57_RS05065;Dbxref=GenBank:WP_000805509.1;Name=WP_000805509.1;gbkey=CDS;gene=yicS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588471.1;locus_tag=AC57_RS05065;product=protein YicS;protein_id=WP_000805509.1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 85095 86287 . - . ID=gene-AC57_RS0125250;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=pseudogene;locus_tag=AC57_RS0125250;old_locus_tag=AC57_4041;pseudo=true NZ_JJLR01000136.1 Protein Homology CDS 85095 86287 . - 0 ID=cds-AC57_RS0125250;Parent=gene-AC57_RS0125250;Note=frameshifted;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418118.2;locus_tag=AC57_RS0125250;product=purine ribonucleoside efflux pump NepI;pseudo=true;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 86498 86950 . - . ID=gene-AC57_RS05060;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=AC57_RS05060;old_locus_tag=AC57_4042 NZ_JJLR01000136.1 Protein Homology CDS 86498 86950 . - 0 ID=cds-WP_001295241.1;Parent=gene-AC57_RS05060;Dbxref=GenBank:WP_001295241.1;Name=WP_001295241.1;gbkey=CDS;gene=yicN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AC57_RS05060;product=DUF1198 domain-containing protein;protein_id=WP_001295241.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 87003 88337 . - . ID=gene-AC57_RS05055;Name=adeQ;gbkey=Gene;gene=adeQ;gene_biotype=protein_coding;gene_synonym=yicO;locus_tag=AC57_RS05055;old_locus_tag=AC57_4043 NZ_JJLR01000136.1 Protein Homology CDS 87003 88337 . - 0 ID=cds-WP_077756461.1;Parent=gene-AC57_RS05055;Dbxref=GenBank:WP_077756461.1;Name=WP_077756461.1;gbkey=CDS;gene=adeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418120.2;locus_tag=AC57_RS05055;product=adenine permease AdeQ;protein_id=WP_077756461.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 88512 90278 . + . ID=gene-AC57_RS05050;Name=adeD;gbkey=Gene;gene=adeD;gene_biotype=protein_coding;locus_tag=AC57_RS05050;old_locus_tag=AC57_4044 NZ_JJLR01000136.1 Protein Homology CDS 88512 90278 . + 0 ID=cds-WP_032236952.1;Parent=gene-AC57_RS05050;Dbxref=GenBank:WP_032236952.1;Name=WP_032236952.1;gbkey=CDS;gene=adeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418121.1;locus_tag=AC57_RS05050;product=adenine deaminase;protein_id=WP_032236952.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 90324 91715 . - . ID=gene-AC57_RS05045;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AC57_RS05045;old_locus_tag=AC57_4045 NZ_JJLR01000136.1 Protein Homology CDS 90324 91715 . - 0 ID=cds-WP_032285744.1;Parent=gene-AC57_RS05045;Dbxref=GenBank:WP_032285744.1;Name=WP_032285744.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AC57_RS05045;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_032285744.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 91853 93172 . - . ID=gene-AC57_RS05040;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AC57_RS05040;old_locus_tag=AC57_4046 NZ_JJLR01000136.1 Protein Homology CDS 91853 93172 . - 0 ID=cds-WP_000936566.1;Parent=gene-AC57_RS05040;Dbxref=GenBank:WP_000936566.1;Name=WP_000936566.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AC57_RS05040;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_000936566.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 93182 94684 . - . ID=gene-AC57_RS05035;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AC57_RS05035;old_locus_tag=AC57_4047 NZ_JJLR01000136.1 Protein Homology CDS 93182 94684 . - 0 ID=cds-WP_001295243.1;Parent=gene-AC57_RS05035;Dbxref=GenBank:WP_001295243.1;Name=WP_001295243.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AC57_RS05035;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_001295243.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 94684 95274 . - . ID=gene-AC57_RS05030;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AC57_RS05030;old_locus_tag=AC57_4048 NZ_JJLR01000136.1 Protein Homology CDS 94684 95274 . - 0 ID=cds-WP_000633668.1;Parent=gene-AC57_RS05030;Dbxref=GenBank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AC57_RS05030;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 95350 95640 . - . ID=gene-AC57_RS05025;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AC57_RS05025;old_locus_tag=AC57_4049 NZ_JJLR01000136.1 Protein Homology CDS 95350 95640 . - 0 ID=cds-WP_001181706.1;Parent=gene-AC57_RS05025;Dbxref=GenBank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AC57_RS05025;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 95644 97332 . - . ID=gene-AC57_RS05020;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AC57_RS05020;old_locus_tag=AC57_4050 NZ_JJLR01000136.1 Protein Homology CDS 95644 97332 . - 0 ID=cds-WP_001398044.1;Parent=gene-AC57_RS05020;Dbxref=GenBank:WP_001398044.1;Name=WP_001398044.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418127.1;locus_tag=AC57_RS05020;product=acetolactate synthase large subunit;protein_id=WP_001398044.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 97438 97536 . - . ID=gene-AC57_RS0125255;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AC57_RS0125255 NZ_JJLR01000136.1 Protein Homology CDS 97438 97536 . - 0 ID=cds-WP_001300753.1;Parent=gene-AC57_RS0125255;Dbxref=GenBank:WP_001300753.1;Name=WP_001300753.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AC57_RS0125255;product=ilvB operon leader peptide IvbL;protein_id=WP_001300753.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 98101 98190 . + . ID=gene-AC57_RS0125270;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AC57_RS0125270 NZ_JJLR01000136.1 Protein Homology CDS 98101 98190 . + 0 ID=cds-WP_001054909.1;Parent=gene-AC57_RS0125270;Dbxref=GenBank:WP_001054909.1;Name=WP_001054909.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165331.1;locus_tag=AC57_RS0125270;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_001054909.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 98314 98388 . - . ID=gene-AC57_RS30575;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AC57_RS30575 NZ_JJLR01000136.1 Protein Homology CDS 98314 98388 . - 0 ID=cds-WP_211180519.1;Parent=gene-AC57_RS30575;Dbxref=GenBank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AC57_RS30575;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 98470 99654 . + . ID=gene-AC57_RS05015;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AC57_RS05015;old_locus_tag=AC57_4053 NZ_JJLR01000136.1 Protein Homology CDS 98470 99654 . + 0 ID=cds-WP_000828746.1;Parent=gene-AC57_RS05015;Dbxref=GenBank:WP_000828746.1;Name=WP_000828746.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AC57_RS05015;product=multidrug efflux MFS transporter EmrD;protein_id=WP_000828746.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 99662 100159 . - . ID=gene-AC57_RS05010;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AC57_RS05010;old_locus_tag=AC57_4054 NZ_JJLR01000136.1 Protein Homology CDS 99662 100159 . - 0 ID=cds-WP_000148061.1;Parent=gene-AC57_RS05010;Dbxref=GenBank:WP_000148061.1;Name=WP_000148061.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418130.1;locus_tag=AC57_RS05010;product=radical SAM protein;protein_id=WP_000148061.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 100156 100518 . - . ID=gene-AC57_RS05005;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AC57_RS05005;old_locus_tag=AC57_4055 NZ_JJLR01000136.1 Protein Homology CDS 100156 100518 . - 0 ID=cds-WP_001113432.1;Parent=gene-AC57_RS05005;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AC57_RS05005;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 100508 100855 . - . ID=gene-AC57_RS05000;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AC57_RS05000;old_locus_tag=AC57_4056 NZ_JJLR01000136.1 Protein Homology CDS 100508 100855 . - 0 ID=cds-WP_000703959.1;Parent=gene-AC57_RS05000;Dbxref=GenBank:WP_000703959.1;Name=WP_000703959.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AC57_RS05000;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 100963 101412 . + . ID=gene-AC57_RS04995;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=AC57_RS04995;old_locus_tag=AC57_4057 NZ_JJLR01000136.1 Protein Homology CDS 100963 101412 . + 0 ID=cds-WP_032279422.1;Parent=gene-AC57_RS04995;Dbxref=GenBank:WP_032279422.1;Name=WP_032279422.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418133.1;locus_tag=AC57_RS04995;product=protein YidI;protein_id=WP_032279422.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 101459 102952 . - . ID=gene-AC57_RS04990;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=AC57_RS04990;old_locus_tag=AC57_4058 NZ_JJLR01000136.1 Protein Homology CDS 101459 102952 . - 0 ID=cds-WP_032236953.1;Parent=gene-AC57_RS04990;Dbxref=GenBank:WP_032236953.1;Name=WP_032236953.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AC57_RS04990;product=sulfatase-like hydrolase/transferase;protein_id=WP_032236953.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 102949 104664 . - . ID=gene-AC57_RS04985;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=AC57_RS04985;old_locus_tag=AC57_4059 NZ_JJLR01000136.1 Protein Homology CDS 102949 104664 . - 0 ID=cds-WP_004025737.1;Parent=gene-AC57_RS04985;Dbxref=GenBank:WP_004025737.1;Name=WP_004025737.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418135.1;locus_tag=AC57_RS04985;product=solute:sodium symporter family transporter;protein_id=WP_004025737.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 104831 105724 . + . ID=gene-AC57_RS04980;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=AC57_RS04980;old_locus_tag=AC57_4060 NZ_JJLR01000136.1 Protein Homology CDS 104831 105724 . + 0 ID=cds-WP_001013540.1;Parent=gene-AC57_RS04980;Dbxref=GenBank:WP_001013540.1;Name=WP_001013540.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yidL;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AC57_RS04980;product=helix-turn-helix transcriptional regulator;protein_id=WP_001013540.1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 105721 106535 . - . ID=gene-AC57_RS04975;Name=AC57_RS04975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS04975;old_locus_tag=AC57_4062;pseudo=true NZ_JJLR01000136.1 Protein Homology CDS 105721 106535 . - 0 ID=cds-AC57_RS04975;Parent=gene-AC57_RS04975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=AC57_RS04975;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 106535 108151 . - . ID=gene-AC57_RS04970;Name=AC57_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04970;old_locus_tag=AC57_4063 NZ_JJLR01000136.1 Protein Homology CDS 106535 108151 . - 0 ID=cds-WP_032181501.1;Parent=gene-AC57_RS04970;Dbxref=GenBank:WP_032181501.1;Name=WP_032181501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AC57_RS04970;product=PTS sugar transporter subunit IIB;protein_id=WP_032181501.1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 108447 109084 . + . ID=gene-AC57_RS0125275;Name=AC57_RS0125275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125275;old_locus_tag=AC57_4064;pseudo=true NZ_JJLR01000136.1 Protein Homology CDS 108447 109084 . + 0 ID=cds-AC57_RS0125275;Parent=gene-AC57_RS0125275;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418139.1;locus_tag=AC57_RS0125275;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 109081 110742 . - . ID=gene-AC57_RS04965;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AC57_RS04965;old_locus_tag=AC57_4065 NZ_JJLR01000136.1 Protein Homology CDS 109081 110742 . - 0 ID=cds-WP_001279752.1;Parent=gene-AC57_RS04965;Dbxref=GenBank:WP_001279752.1;Name=WP_001279752.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AC57_RS04965;product=putative transporter;protein_id=WP_001279752.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 110938 111366 . - . ID=gene-AC57_RS04960;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AC57_RS04960;old_locus_tag=AC57_4066 NZ_JJLR01000136.1 Protein Homology CDS 110938 111366 . - 0 ID=cds-WP_001243431.1;Parent=gene-AC57_RS04960;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AC57_RS04960;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 111478 111891 . - . ID=gene-AC57_RS04955;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AC57_RS04955;old_locus_tag=AC57_4067 NZ_JJLR01000136.1 Protein Homology CDS 111478 111891 . - 0 ID=cds-WP_001243437.1;Parent=gene-AC57_RS04955;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AC57_RS04955;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JJLR01000136.1 cmsearch sequence_feature 111885 111957 . - . ID=id-NZ_JJLR01000136.1:111885..111957;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLR01000136.1 RefSeq gene 112197 112529 . + . ID=gene-AC57_RS04950;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AC57_RS04950;old_locus_tag=AC57_4068 NZ_JJLR01000136.1 Protein Homology CDS 112197 112529 . + 0 ID=cds-WP_000620888.1;Parent=gene-AC57_RS04950;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AC57_RS04950;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 112531 113745 . - . ID=gene-AC57_RS04945;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AC57_RS04945;old_locus_tag=AC57_4069 NZ_JJLR01000136.1 Protein Homology CDS 112531 113745 . - 0 ID=cds-WP_032279425.1;Parent=gene-AC57_RS04945;Dbxref=GenBank:WP_032279425.1;Name=WP_032279425.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AC57_RS04945;product=DUF3748 domain-containing protein;protein_id=WP_032279425.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 113846 114910 . + . ID=gene-AC57_RS04940;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AC57_RS04940;old_locus_tag=AC57_4070 NZ_JJLR01000136.1 Protein Homology CDS 113846 114910 . + 0 ID=cds-WP_001460147.1;Parent=gene-AC57_RS04940;Dbxref=GenBank:WP_001460147.1;Name=WP_001460147.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418145.2;locus_tag=AC57_RS04940;product=colicin M resistance lipid reductase CbrA;protein_id=WP_001460147.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 114907 116244 . - . ID=gene-AC57_RS04935;Name=dgoT;gbkey=Gene;gene=dgoT;gene_biotype=protein_coding;locus_tag=AC57_RS04935;old_locus_tag=AC57_4071 NZ_JJLR01000136.1 Protein Homology CDS 114907 116244 . - 0 ID=cds-WP_000253455.1;Parent=gene-AC57_RS04935;Dbxref=GenBank:WP_000253455.1;Name=WP_000253455.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=dgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=AC57_RS04935;product=MFS transporter;protein_id=WP_000253455.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 116319 117467 . - . ID=gene-AC57_RS04930;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=AC57_RS04930;old_locus_tag=AC57_4072 NZ_JJLR01000136.1 Protein Homology CDS 116319 117467 . - 0 ID=cds-WP_000705012.1;Parent=gene-AC57_RS04930;Dbxref=GenBank:WP_000705012.1;Name=WP_000705012.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=AC57_RS04930;product=galactonate dehydratase;protein_id=WP_000705012.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 117464 118081 . - . ID=gene-AC57_RS04925;Name=dgoA;gbkey=Gene;gene=dgoA;gene_biotype=protein_coding;locus_tag=AC57_RS04925;old_locus_tag=AC57_4073 NZ_JJLR01000136.1 Protein Homology CDS 117464 118081 . - 0 ID=cds-WP_001198699.1;Parent=gene-AC57_RS04925;Dbxref=GenBank:WP_001198699.1;Name=WP_001198699.1;gbkey=CDS;gene=dgoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=AC57_RS04925;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_001198699.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 118065 118943 . - . ID=gene-AC57_RS04920;Name=dgoK;gbkey=Gene;gene=dgoK;gene_biotype=protein_coding;locus_tag=AC57_RS04920;old_locus_tag=AC57_4074 NZ_JJLR01000136.1 Protein Homology CDS 118065 118943 . - 0 ID=cds-WP_000127112.1;Parent=gene-AC57_RS04920;Dbxref=GenBank:WP_000127112.1;Name=WP_000127112.1;gbkey=CDS;gene=dgoK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709506.1;locus_tag=AC57_RS04920;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_000127112.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 118940 119629 . - . ID=gene-AC57_RS04915;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=AC57_RS04915;old_locus_tag=AC57_4075 NZ_JJLR01000136.1 Protein Homology CDS 118940 119629 . - 0 ID=cds-WP_000174305.1;Parent=gene-AC57_RS04915;Dbxref=GenBank:WP_000174305.1;Name=WP_000174305.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=AC57_RS04915;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_000174305.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 119907 120563 . + . ID=gene-AC57_RS04910;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AC57_RS04910;old_locus_tag=AC57_4076 NZ_JJLR01000136.1 Protein Homology CDS 119907 120563 . + 0 ID=cds-WP_000772934.1;Parent=gene-AC57_RS04910;Dbxref=GenBank:WP_000772934.1;Name=WP_000772934.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709504.1;locus_tag=AC57_RS04910;product=protein YidX;protein_id=WP_000772934.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 120609 121421 . - . ID=gene-AC57_RS04905;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AC57_RS04905;old_locus_tag=AC57_4077 NZ_JJLR01000136.1 Protein Homology CDS 120609 121421 . - 0 ID=cds-WP_000985549.1;Parent=gene-AC57_RS04905;Dbxref=GenBank:WP_000985549.1;Name=WP_000985549.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AC57_RS04905;product=sugar-phosphatase;protein_id=WP_000985549.1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 121536 121934 . - . ID=gene-AC57_RS04900;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=pseudogene;locus_tag=AC57_RS04900;old_locus_tag=AC57_4078;pseudo=true NZ_JJLR01000136.1 Protein Homology CDS 121536 121934 . - 0 ID=cds-AC57_RS04900;Parent=gene-AC57_RS04900;Note=internal stop;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AC57_RS04900;product=YidB family protein;pseudo=true;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 122174 124588 . - . ID=gene-AC57_RS04895;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AC57_RS04895;old_locus_tag=AC57_4079 NZ_JJLR01000136.1 Protein Homology CDS 122174 124588 . - 0 ID=cds-WP_001508092.1;Parent=gene-AC57_RS04895;Dbxref=GenBank:WP_001508092.1;Name=WP_001508092.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AC57_RS04895;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_001508092.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 124617 125690 . - . ID=gene-AC57_RS04890;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AC57_RS04890;old_locus_tag=AC57_4080 NZ_JJLR01000136.1 Protein Homology CDS 124617 125690 . - 0 ID=cds-WP_032236955.1;Parent=gene-AC57_RS04890;Dbxref=GenBank:WP_032236955.1;Name=WP_032236955.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AC57_RS04890;product=DNA replication/repair protein RecF;protein_id=WP_032236955.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 125690 126790 . - . ID=gene-AC57_RS04885;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AC57_RS04885;old_locus_tag=AC57_4081 NZ_JJLR01000136.1 Protein Homology CDS 125690 126790 . - 0 ID=cds-WP_000673464.1;Parent=gene-AC57_RS04885;Dbxref=GenBank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AC57_RS04885;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 126795 128198 . - . ID=gene-AC57_RS04880;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AC57_RS04880;old_locus_tag=AC57_4082 NZ_JJLR01000136.1 Protein Homology CDS 126795 128198 . - 0 ID=cds-WP_000059111.1;Parent=gene-AC57_RS04880;Dbxref=GenBank:WP_000059111.1;Name=WP_000059111.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AC57_RS04880;product=chromosomal replication initiator protein DnaA;protein_id=WP_000059111.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 128495 128575 . + . ID=gene-AC57_RS30000;Name=AC57_RS30000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30000 NZ_JJLR01000136.1 Protein Homology CDS 128495 128575 . + 0 ID=cds-WP_120795392.1;Parent=gene-AC57_RS30000;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AC57_RS30000;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 128805 128945 . + . ID=gene-AC57_RS04875;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AC57_RS04875;old_locus_tag=AC57_4083 NZ_JJLR01000136.1 Protein Homology CDS 128805 128945 . + 0 ID=cds-WP_000831330.1;Parent=gene-AC57_RS04875;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AC57_RS04875;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 128962 129321 . + . ID=gene-AC57_RS04870;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AC57_RS04870;old_locus_tag=AC57_4084 NZ_JJLR01000136.1 Protein Homology CDS 128962 129321 . + 0 ID=cds-WP_000239730.1;Parent=gene-AC57_RS04870;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AC57_RS04870;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 129285 129542 . + . ID=gene-AC57_RS0125285;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AC57_RS0125285 NZ_JJLR01000136.1 Protein Homology CDS 129285 129542 . + 0 ID=cds-WP_001307474.1;Parent=gene-AC57_RS0125285;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AC57_RS0125285;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 129545 131191 . + . ID=gene-AC57_RS04865;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AC57_RS04865;old_locus_tag=AC57_4085 NZ_JJLR01000136.1 Protein Homology CDS 129545 131191 . + 0 ID=cds-WP_000378250.1;Parent=gene-AC57_RS04865;Dbxref=GenBank:WP_000378250.1;Name=WP_000378250.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418161.1;locus_tag=AC57_RS04865;product=membrane protein insertase YidC;protein_id=WP_000378250.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 131297 132661 . + . ID=gene-AC57_RS04860;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AC57_RS04860;old_locus_tag=AC57_4086 NZ_JJLR01000136.1 Protein Homology CDS 131297 132661 . + 0 ID=cds-WP_001282346.1;Parent=gene-AC57_RS04860;Dbxref=GenBank:WP_001282346.1;Name=WP_001282346.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AC57_RS04860;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001282346.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 132904 132978 . + . ID=gene-AC57_RS0125290;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=AC57_RS0125290 NZ_JJLR01000136.1 Protein Homology CDS 132904 132978 . + 0 ID=cds-WP_001364348.1;Parent=gene-AC57_RS0125290;Dbxref=GenBank:WP_001364348.1;Name=WP_001364348.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312671.1;locus_tag=AC57_RS0125290;product=tryptophanase leader peptide;protein_id=WP_001364348.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 133199 134614 . + . ID=gene-AC57_RS04855;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=AC57_RS04855;old_locus_tag=AC57_4087 NZ_JJLR01000136.1 Protein Homology CDS 133199 134614 . + 0 ID=cds-WP_001295247.1;Parent=gene-AC57_RS04855;Dbxref=GenBank:WP_001295247.1;Name=WP_001295247.1;Ontology_term=GO:0006568,GO:0009034;gbkey=CDS;gene=tnaA;go_function=tryptophanase activity|0009034||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709490.2;locus_tag=AC57_RS04855;product=tryptophanase;protein_id=WP_001295247.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 134705 135952 . + . ID=gene-AC57_RS04850;Name=tnaB;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=AC57_RS04850;old_locus_tag=AC57_4088 NZ_JJLR01000136.1 Protein Homology CDS 134705 135952 . + 0 ID=cds-WP_032236957.1;Parent=gene-AC57_RS04850;Dbxref=GenBank:WP_032236957.1;Name=WP_032236957.1;gbkey=CDS;gene=tnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418165.1;locus_tag=AC57_RS04850;product=low affinity tryptophan permease TnaB;protein_id=WP_032236957.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 136084 137259 . + . ID=gene-AC57_RS04845;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AC57_RS04845;old_locus_tag=AC57_4089 NZ_JJLR01000136.1 Protein Homology CDS 136084 137259 . + 0 ID=cds-WP_000085982.1;Parent=gene-AC57_RS04845;Dbxref=GenBank:WP_000085982.1;Name=WP_000085982.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418166.1;locus_tag=AC57_RS04845;product=multidrug efflux MFS transporter MdtL;protein_id=WP_000085982.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 137234 138193 . + . ID=gene-AC57_RS04840;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AC57_RS04840;old_locus_tag=AC57_4090 NZ_JJLR01000136.1 Protein Homology CDS 137234 138193 . + 0 ID=cds-WP_032236958.1;Parent=gene-AC57_RS04840;Dbxref=GenBank:WP_032236958.1;Name=WP_032236958.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418167.1;locus_tag=AC57_RS04840;product=HTH-type transcriptional regulator YidZ;protein_id=WP_032236958.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 138350 139099 . + . ID=gene-AC57_RS04835;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AC57_RS04835;old_locus_tag=AC57_4091 NZ_JJLR01000136.1 Protein Homology CDS 138350 139099 . + 0 ID=cds-WP_001618966.1;Parent=gene-AC57_RS04835;Dbxref=GenBank:WP_001618966.1;Name=WP_001618966.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AC57_RS04835;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_001618966.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 139121 139687 . + . ID=gene-AC57_RS04830;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=AC57_RS04830;old_locus_tag=AC57_4092 NZ_JJLR01000136.1 Protein Homology CDS 139121 139687 . + 0 ID=cds-WP_032236959.1;Parent=gene-AC57_RS04830;Dbxref=GenBank:WP_032236959.1;Name=WP_032236959.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AC57_RS04830;product=class I chromate reductase YieF;protein_id=WP_032236959.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 139741 141078 . - . ID=gene-AC57_RS04825;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AC57_RS04825;old_locus_tag=AC57_4093 NZ_JJLR01000136.1 Protein Homology CDS 139741 141078 . - 0 ID=cds-WP_032236961.1;Parent=gene-AC57_RS04825;Dbxref=GenBank:WP_032236961.1;Name=WP_032236961.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=AC57_RS04825;product=adenine permease AdeP;protein_id=WP_032236961.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 141245 141910 . + . ID=gene-AC57_RS04820;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AC57_RS04820;old_locus_tag=AC57_4094 NZ_JJLR01000136.1 Protein Homology CDS 141245 141910 . + 0 ID=cds-WP_000078072.1;Parent=gene-AC57_RS04820;Dbxref=GenBank:WP_000078072.1;Name=WP_000078072.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418171.1;locus_tag=AC57_RS04820;product=6-phosphogluconate phosphatase;protein_id=WP_000078072.1;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 141977 142450 . + . ID=gene-AC57_RS0125295;Name=cbrB;gbkey=Gene;gene=cbrB;gene_biotype=protein_coding;locus_tag=AC57_RS0125295;old_locus_tag=AC57_4095 NZ_JJLR01000136.1 Protein Homology CDS 141977 142450 . + 0 ID=cds-WP_000116770.1;Parent=gene-AC57_RS0125295;Dbxref=GenBank:WP_000116770.1;Name=WP_000116770.1;gbkey=CDS;gene=cbrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709481.1;locus_tag=AC57_RS0125295;product=protein CbrB;protein_id=WP_000116770.1;transl_table=11 NZ_JJLR01000136.1 RefSeq pseudogene 142527 143033 . - . ID=gene-AC57_RS0125300;Name=AC57_RS0125300;end_range=143033,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125300;old_locus_tag=AC57_4096;partial=true;pseudo=true NZ_JJLR01000136.1 Protein Homology CDS 142527 143033 . - 0 ID=cds-AC57_RS0125300;Parent=gene-AC57_RS0125300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006044,GO:0004342;end_range=143033,.;gbkey=CDS;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709477.1;locus_tag=AC57_RS0125300;partial=true;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11 NZ_JJLR01000136.1 RefSeq gene 143051 143301 . - . ID=gene-AC57_RS04815;Name=AC57_RS04815;end_range=143301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04815;old_locus_tag=AC57_4097;partial=true NZ_JJLR01000136.1 Protein Homology CDS 143051 143301 . - 2 ID=cds-WP_000674744.1-9;Parent=gene-AC57_RS04815;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=143301,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS04815;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;transl_table=11 ##sequence-region NZ_JJLR01000137.1 1 14064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000137.1 RefSeq region 1 14064 . + . ID=NZ_JJLR01000137.1:1..14064;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000137.1 RefSeq gene 1 200 . - . ID=gene-AC57_RS04810;Name=AC57_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04810;old_locus_tag=AC57_4098;partial=true;start_range=.,1 NZ_JJLR01000137.1 Protein Homology CDS 1 200 . - 0 ID=cds-WP_000179200.1-2;Parent=gene-AC57_RS04810;Dbxref=GenBank:WP_000179200.1;Name=WP_000179200.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS04810;partial=true;product=IS1 family transposase;protein_id=WP_000179200.1;start_range=.,1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 229 1575 . - . ID=gene-AC57_RS04805;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=AC57_RS04805;old_locus_tag=AC57_4099 NZ_JJLR01000137.1 Protein Homology CDS 229 1575 . - 0 ID=cds-WP_050440089.1;Parent=gene-AC57_RS04805;Dbxref=GenBank:WP_050440089.1;Name=WP_050440089.1;gbkey=CDS;gene=bglB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418177.1;locus_tag=AC57_RS04805;product=6-phospho-beta-glucosidase BglB;protein_id=WP_050440089.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 1594 3471 . - . ID=gene-AC57_RS04800;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=protein_coding;locus_tag=AC57_RS04800;old_locus_tag=AC57_4100 NZ_JJLR01000137.1 Protein Homology CDS 1594 3471 . - 0 ID=cds-WP_001618969.1;Parent=gene-AC57_RS04800;Dbxref=GenBank:WP_001618969.1;Name=WP_001618969.1;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418178.1;locus_tag=AC57_RS04800;product=PTS beta-glucoside transporter subunit IIABC;protein_id=WP_001618969.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 3604 4440 . - . ID=gene-AC57_RS04795;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=AC57_RS04795;old_locus_tag=AC57_4101 NZ_JJLR01000137.1 Protein Homology CDS 3604 4440 . - 0 ID=cds-WP_001295251.1;Parent=gene-AC57_RS04795;Dbxref=GenBank:WP_001295251.1;Name=WP_001295251.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418179.1;locus_tag=AC57_RS04795;product=transcriptional antiterminator BglG;protein_id=WP_001295251.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 4726 5451 . - . ID=gene-AC57_RS04790;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AC57_RS04790;old_locus_tag=AC57_4103 NZ_JJLR01000137.1 Protein Homology CDS 4726 5451 . - 0 ID=cds-WP_000377786.1;Parent=gene-AC57_RS04790;Dbxref=GenBank:WP_000377786.1;Name=WP_000377786.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418180.1;locus_tag=AC57_RS04790;product=phosphate signaling complex protein PhoU;protein_id=WP_000377786.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 5466 6239 . - . ID=gene-AC57_RS04785;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AC57_RS04785;old_locus_tag=AC57_4104 NZ_JJLR01000137.1 Protein Homology CDS 5466 6239 . - 0 ID=cds-WP_000063125.1;Parent=gene-AC57_RS04785;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AC57_RS04785;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 6422 7312 . - . ID=gene-AC57_RS04780;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AC57_RS04780;old_locus_tag=AC57_4105 NZ_JJLR01000137.1 Protein Homology CDS 6422 7312 . - 0 ID=cds-WP_032181515.1;Parent=gene-AC57_RS04780;Dbxref=GenBank:WP_032181515.1;Name=WP_032181515.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AC57_RS04780;product=phosphate ABC transporter permease PstA;protein_id=WP_032181515.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 7312 8271 . - . ID=gene-AC57_RS04775;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AC57_RS04775;old_locus_tag=AC57_4106 NZ_JJLR01000137.1 Protein Homology CDS 7312 8271 . - 0 ID=cds-WP_000741620.1;Parent=gene-AC57_RS04775;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AC57_RS04775;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 8358 9398 . - . ID=gene-AC57_RS04770;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AC57_RS04770;old_locus_tag=AC57_4107 NZ_JJLR01000137.1 Protein Homology CDS 8358 9398 . - 0 ID=cds-WP_000867146.1;Parent=gene-AC57_RS04770;Dbxref=GenBank:WP_000867146.1;Name=WP_000867146.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418184.1;locus_tag=AC57_RS04770;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867146.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 10201 10440 . + . ID=gene-AC57_RS27985;Name=AC57_RS27985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS27985 NZ_JJLR01000137.1 Protein Homology CDS 10201 10440 . + 0 ID=cds-WP_001353740.1;Parent=gene-AC57_RS27985;Dbxref=GenBank:WP_001353740.1;Name=WP_001353740.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020425.6;locus_tag=AC57_RS27985;product=BrxA family protein;protein_id=WP_001353740.1;transl_table=11 NZ_JJLR01000137.1 RefSeq pseudogene 10628 11605 . - . ID=gene-AC57_RS30005;Name=intI2;gbkey=Gene;gene=intI2;gene_biotype=pseudogene;locus_tag=AC57_RS30005;pseudo=true NZ_JJLR01000137.1 Protein Homology CDS 10628 11605 . - 0 ID=cds-AC57_RS30005;Parent=gene-AC57_RS30005;Note=internal stop;gbkey=CDS;gene=intI2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023994230.1;locus_tag=AC57_RS30005;product=class 2 integron integrase IntI2;pseudo=true;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 11937 12410 . + . ID=gene-AC57_RS0125315;Name=dfrA1;gbkey=Gene;gene=dfrA1;gene_biotype=protein_coding;locus_tag=AC57_RS0125315 NZ_JJLR01000137.1 Protein Homology CDS 11937 12410 . + 0 ID=cds-WP_000777554.1;Parent=gene-AC57_RS0125315;Dbxref=GenBank:WP_000777554.1;Name=WP_000777554.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA1;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355915.1;locus_tag=AC57_RS0125315;product=trimethoprim-resistant dihydrofolate reductase DfrA1;protein_id=WP_000777554.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 12505 13029 . + . ID=gene-AC57_RS0125320;Name=sat2;gbkey=Gene;gene=sat2;gene_biotype=protein_coding;locus_tag=AC57_RS0125320 NZ_JJLR01000137.1 Protein Homology CDS 12505 13029 . + 0 ID=cds-WP_000704156.1;Parent=gene-AC57_RS0125320;Dbxref=GenBank:WP_000704156.1;Name=WP_000704156.1;gbkey=CDS;gene=sat2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000704156.1;locus_tag=AC57_RS0125320;product=streptothricin N-acetyltransferase Sat2;protein_id=WP_000704156.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 13098 13595 . + . ID=gene-AC57_RS0125325;Name=AC57_RS0125325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125325 NZ_JJLR01000137.1 GeneMarkS-2+ CDS 13098 13595 . + 0 ID=cds-WP_001444089.1;Parent=gene-AC57_RS0125325;Dbxref=GenBank:WP_001444089.1;Name=WP_001444089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0125325;product=hypothetical protein;protein_id=WP_001444089.1;transl_table=11 NZ_JJLR01000137.1 RefSeq gene 13883 14064 . + . ID=gene-AC57_RS04760;Name=AC57_RS04760;end_range=14064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04760;old_locus_tag=AC57_4110;partial=true NZ_JJLR01000137.1 Protein Homology CDS 13883 14064 . + 0 ID=cds-WP_001553511.1;Parent=gene-AC57_RS04760;Dbxref=GenBank:WP_001553511.1;Name=WP_001553511.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=14064,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS04760;partial=true;product=transposase;protein_id=WP_001553511.1;transl_table=11 ##sequence-region NZ_JJLR01000138.1 1 41021 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000138.1 RefSeq region 1 41021 . + . ID=NZ_JJLR01000138.1:1..41021;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000138.1 RefSeq gene 28 378 . + . ID=gene-AC57_RS04755;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS04755;old_locus_tag=AC57_4111 NZ_JJLR01000138.1 Protein Homology CDS 28 378 . + 0 ID=cds-WP_000624688.1-2;Parent=gene-AC57_RS04755;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS04755;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 409 2022 . + . ID=gene-AC57_RS04750;Name=AC57_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04750;old_locus_tag=AC57_4112 NZ_JJLR01000138.1 Protein Homology CDS 409 2022 . + 0 ID=cds-WP_000080172.1-2;Parent=gene-AC57_RS04750;Dbxref=GenBank:WP_000080172.1;Name=WP_000080172.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS04750;product=IS66-like element ISEc43 family transposase;protein_id=WP_000080172.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 2700 3077 . + . ID=gene-AC57_RS0125335;Name=AC57_RS0125335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125335 NZ_JJLR01000138.1 GeneMarkS-2+ CDS 2700 3077 . + 0 ID=cds-WP_001271300.1;Parent=gene-AC57_RS0125335;Dbxref=GenBank:WP_001271300.1;Name=WP_001271300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0125335;product=hypothetical protein;protein_id=WP_001271300.1;transl_table=11 NZ_JJLR01000138.1 RefSeq pseudogene 3100 3252 . + . ID=gene-AC57_RS30010;Name=AC57_RS30010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30010;old_locus_tag=AC57_4113;partial=true;pseudo=true;start_range=.,3100 NZ_JJLR01000138.1 Protein Homology CDS 3100 3252 . + 0 ID=cds-AC57_RS30010;Parent=gene-AC57_RS30010;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011069623.1;locus_tag=AC57_RS30010;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,3100;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 3308 4924 . - . ID=gene-AC57_RS04740;Name=AC57_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04740;old_locus_tag=AC57_4114 NZ_JJLR01000138.1 Protein Homology CDS 3308 4924 . - 0 ID=cds-WP_000251879.1;Parent=gene-AC57_RS04740;Dbxref=GenBank:WP_000251879.1;Name=WP_000251879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000251878.1;locus_tag=AC57_RS04740;product=Tn7-like element transposition protein TnsE;protein_id=WP_000251879.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 4925 6451 . - . ID=gene-AC57_RS04735;Name=AC57_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04735;old_locus_tag=AC57_4115 NZ_JJLR01000138.1 Protein Homology CDS 4925 6451 . - 0 ID=cds-WP_001243518.1;Parent=gene-AC57_RS04735;Dbxref=GenBank:WP_001243518.1;Name=WP_001243518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018259.6;locus_tag=AC57_RS04735;product=TnsD family Tn7-like transposition protein;protein_id=WP_001243518.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 6454 8121 . - . ID=gene-AC57_RS04730;Name=AC57_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04730;old_locus_tag=AC57_4116 NZ_JJLR01000138.1 Protein Homology CDS 6454 8121 . - 0 ID=cds-WP_001276994.1;Parent=gene-AC57_RS04730;Dbxref=GenBank:WP_001276994.1;Name=WP_001276994.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276995.1;locus_tag=AC57_RS04730;product=AAA family ATPase;protein_id=WP_001276994.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 8118 10226 . - . ID=gene-AC57_RS04725;Name=AC57_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04725;old_locus_tag=AC57_4117 NZ_JJLR01000138.1 Protein Homology CDS 8118 10226 . - 0 ID=cds-WP_000267723.1;Parent=gene-AC57_RS04725;Dbxref=GenBank:WP_000267723.1;Name=WP_000267723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005086214.1;locus_tag=AC57_RS04725;product=DDE-type integrase/transposase/recombinase;protein_id=WP_000267723.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 10213 11034 . - . ID=gene-AC57_RS04720;Name=AC57_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04720;old_locus_tag=AC57_4118 NZ_JJLR01000138.1 Protein Homology CDS 10213 11034 . - 0 ID=cds-WP_001029679.1;Parent=gene-AC57_RS04720;Dbxref=GenBank:WP_001029679.1;Name=WP_001029679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001472554.1;locus_tag=AC57_RS04720;product=TnsA endonuclease N-terminal domain-containing protein;protein_id=WP_001029679.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 11194 13023 . - . ID=gene-AC57_RS04715;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AC57_RS04715;old_locus_tag=AC57_4119 NZ_JJLR01000138.1 Protein Homology CDS 11194 13023 . - 0 ID=cds-WP_032279800.1;Parent=gene-AC57_RS04715;Dbxref=GenBank:WP_032279800.1;Name=WP_032279800.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AC57_RS04715;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_032279800.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 13185 14555 . - . ID=gene-AC57_RS04710;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AC57_RS04710;old_locus_tag=AC57_4120 NZ_JJLR01000138.1 Protein Homology CDS 13185 14555 . - 0 ID=cds-WP_032236965.1;Parent=gene-AC57_RS04710;Dbxref=GenBank:WP_032236965.1;Name=WP_032236965.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AC57_RS04710;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_032236965.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 14908 15327 . - . ID=gene-AC57_RS04705;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AC57_RS04705;old_locus_tag=AC57_4121 NZ_JJLR01000138.1 Protein Homology CDS 14908 15327 . - 0 ID=cds-WP_001251965.1;Parent=gene-AC57_RS04705;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AC57_RS04705;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 15348 16730 . - . ID=gene-AC57_RS04700;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AC57_RS04700;old_locus_tag=AC57_4122 NZ_JJLR01000138.1 Protein Homology CDS 15348 16730 . - 0 ID=cds-WP_000190506.1;Parent=gene-AC57_RS04700;Dbxref=GenBank:WP_000190506.1;Name=WP_000190506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AC57_RS04700;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 16757 17620 . - . ID=gene-AC57_RS04695;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AC57_RS04695;old_locus_tag=AC57_4123 NZ_JJLR01000138.1 Protein Homology CDS 16757 17620 . - 0 ID=cds-WP_000896498.1;Parent=gene-AC57_RS04695;Dbxref=GenBank:WP_000896498.1;Name=WP_000896498.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AC57_RS04695;product=F0F1 ATP synthase subunit gamma;protein_id=WP_000896498.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 17671 19212 . - . ID=gene-AC57_RS04690;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AC57_RS04690;old_locus_tag=AC57_4124 NZ_JJLR01000138.1 Protein Homology CDS 17671 19212 . - 0 ID=cds-WP_001176745.1;Parent=gene-AC57_RS04690;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AC57_RS04690;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 19225 19758 . - . ID=gene-AC57_RS04685;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AC57_RS04685;old_locus_tag=AC57_4125 NZ_JJLR01000138.1 Protein Homology CDS 19225 19758 . - 0 ID=cds-WP_001288587.1;Parent=gene-AC57_RS04685;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AC57_RS04685;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 19773 20243 . - . ID=gene-AC57_RS04680;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AC57_RS04680;old_locus_tag=AC57_4126 NZ_JJLR01000138.1 Protein Homology CDS 19773 20243 . - 0 ID=cds-WP_001052219.1;Parent=gene-AC57_RS04680;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AC57_RS04680;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 20305 20544 . - . ID=gene-AC57_RS04675;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AC57_RS04675;old_locus_tag=AC57_4127 NZ_JJLR01000138.1 Protein Homology CDS 20305 20544 . - 0 ID=cds-WP_000429386.1;Parent=gene-AC57_RS04675;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AC57_RS04675;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 20591 21406 . - . ID=gene-AC57_RS04670;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AC57_RS04670;old_locus_tag=AC57_4128 NZ_JJLR01000138.1 Protein Homology CDS 20591 21406 . - 0 ID=cds-WP_000135625.1;Parent=gene-AC57_RS04670;Dbxref=GenBank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AC57_RS04670;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 21415 21795 . - . ID=gene-AC57_RS0125340;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AC57_RS0125340 NZ_JJLR01000138.1 Protein Homology CDS 21415 21795 . - 0 ID=cds-WP_032279801.1;Parent=gene-AC57_RS0125340;Dbxref=GenBank:WP_032279801.1;Name=WP_032279801.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AC57_RS0125340;product=F0F1 ATP synthase subunit I;protein_id=WP_032279801.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 22412 23035 . - . ID=gene-AC57_RS04665;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AC57_RS04665;old_locus_tag=AC57_4130 NZ_JJLR01000138.1 Protein Homology CDS 22412 23035 . - 0 ID=cds-WP_000932839.1;Parent=gene-AC57_RS04665;Dbxref=GenBank:WP_000932839.1;Name=WP_000932839.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AC57_RS04665;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_000932839.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 23099 24988 . - . ID=gene-AC57_RS04660;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AC57_RS04660;old_locus_tag=AC57_4131 NZ_JJLR01000138.1 Protein Homology CDS 23099 24988 . - 0 ID=cds-WP_032279802.1;Parent=gene-AC57_RS04660;Dbxref=GenBank:WP_032279802.1;Name=WP_032279802.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AC57_RS04660;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_032279802.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 25367 25810 . - . ID=gene-AC57_RS04655;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AC57_RS04655;old_locus_tag=AC57_4132 NZ_JJLR01000138.1 Protein Homology CDS 25367 25810 . - 0 ID=cds-WP_000763723.1;Parent=gene-AC57_RS04655;Dbxref=GenBank:WP_000763723.1;Name=WP_000763723.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=AC57_RS04655;product=FMN-binding protein MioC;protein_id=WP_000763723.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 25900 26358 . - . ID=gene-AC57_RS04650;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AC57_RS04650;old_locus_tag=AC57_4133 NZ_JJLR01000138.1 Protein Homology CDS 25900 26358 . - 0 ID=cds-WP_000432970.1;Parent=gene-AC57_RS04650;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AC57_RS04650;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 26510 27502 . + . ID=gene-AC57_RS04645;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AC57_RS04645;old_locus_tag=AC57_4134 NZ_JJLR01000138.1 Protein Homology CDS 26510 27502 . + 0 ID=cds-WP_000845113.1;Parent=gene-AC57_RS04645;Dbxref=GenBank:WP_000845113.1;Name=WP_000845113.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312713.1;locus_tag=AC57_RS04645;product=aspartate--ammonia ligase;protein_id=WP_000845113.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 27507 28958 . - . ID=gene-AC57_RS04640;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AC57_RS04640;old_locus_tag=AC57_4135 NZ_JJLR01000138.1 Protein Homology CDS 27507 28958 . - 0 ID=cds-WP_000956642.1;Parent=gene-AC57_RS04640;Dbxref=GenBank:WP_000956642.1;Name=WP_000956642.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AC57_RS04640;product=ATPase RavA stimulator ViaA;protein_id=WP_000956642.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 28952 30448 . - . ID=gene-AC57_RS04635;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AC57_RS04635;old_locus_tag=AC57_4136 NZ_JJLR01000138.1 Protein Homology CDS 28952 30448 . - 0 ID=cds-WP_032236967.1;Parent=gene-AC57_RS04635;Dbxref=GenBank:WP_032236967.1;Name=WP_032236967.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AC57_RS04635;product=ATPase RavA;protein_id=WP_032236967.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 30671 32539 . + . ID=gene-AC57_RS04630;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AC57_RS04630;old_locus_tag=AC57_4137 NZ_JJLR01000138.1 Protein Homology CDS 30671 32539 . + 0 ID=cds-WP_000102319.1;Parent=gene-AC57_RS04630;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AC57_RS04630;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 32706 33125 . + . ID=gene-AC57_RS04625;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AC57_RS04625;old_locus_tag=AC57_4138 NZ_JJLR01000138.1 Protein Homology CDS 32706 33125 . + 0 ID=cds-WP_000715936.1;Parent=gene-AC57_RS04625;Dbxref=GenBank:WP_000715936.1;Name=WP_000715936.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709562.2;locus_tag=AC57_RS04625;product=D-ribose pyranase;protein_id=WP_000715936.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 33133 34638 . + . ID=gene-AC57_RS04620;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AC57_RS04620;old_locus_tag=AC57_4139 NZ_JJLR01000138.1 Protein Homology CDS 33133 34638 . + 0 ID=cds-WP_032285746.1;Parent=gene-AC57_RS04620;Dbxref=GenBank:WP_032285746.1;Name=WP_032285746.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AC57_RS04620;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_032285746.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 34643 35608 . + . ID=gene-AC57_RS04615;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AC57_RS04615;old_locus_tag=AC57_4140 NZ_JJLR01000138.1 Protein Homology CDS 34643 35608 . + 0 ID=cds-WP_000211858.1;Parent=gene-AC57_RS04615;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AC57_RS04615;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 35633 36523 . + . ID=gene-AC57_RS04610;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AC57_RS04610;old_locus_tag=AC57_4141 NZ_JJLR01000138.1 Protein Homology CDS 35633 36523 . + 0 ID=cds-WP_032279803.1;Parent=gene-AC57_RS04610;Dbxref=GenBank:WP_032279803.1;Name=WP_032279803.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AC57_RS04610;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_032279803.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 36649 37578 . + . ID=gene-AC57_RS04605;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AC57_RS04605;old_locus_tag=AC57_4142 NZ_JJLR01000138.1 Protein Homology CDS 36649 37578 . + 0 ID=cds-WP_003581306.1;Parent=gene-AC57_RS04605;Dbxref=GenBank:WP_003581306.1;Name=WP_003581306.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AC57_RS04605;product=ribokinase;protein_id=WP_003581306.1;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 37582 38574 . + . ID=gene-AC57_RS04600;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AC57_RS04600;old_locus_tag=AC57_4143 NZ_JJLR01000138.1 Protein Homology CDS 37582 38574 . + 0 ID=cds-WP_000224470.1;Parent=gene-AC57_RS04600;Dbxref=GenBank:WP_000224470.1;Name=WP_000224470.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AC57_RS04600;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224470.1;transl_table=11 NZ_JJLR01000138.1 RefSeq pseudogene 38540 39967 . - . ID=gene-AC57_RS0125345;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=pseudogene;locus_tag=AC57_RS0125345;pseudo=true NZ_JJLR01000138.1 Protein Homology CDS 38540 39967 . - 0 ID=cds-AC57_RS0125345;Parent=gene-AC57_RS0125345;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418210.1;locus_tag=AC57_RS0125345;product=multidrug transporter subunit MdtD;pseudo=true;transl_table=11 NZ_JJLR01000138.1 RefSeq gene 39990 40682 . - . ID=gene-AC57_RS04595;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AC57_RS04595;old_locus_tag=AC57_4146 NZ_JJLR01000138.1 Protein Homology CDS 39990 40682 . - 0 ID=cds-WP_001131169.1;Parent=gene-AC57_RS04595;Dbxref=GenBank:WP_001131169.1;Name=WP_001131169.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AC57_RS04595;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131169.1;transl_table=11 ##sequence-region NZ_JJLR01000139.1 1 40566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000139.1 RefSeq region 1 40566 . + . ID=NZ_JJLR01000139.1:1..40566;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000139.1 RefSeq gene 17 2922 . + . ID=gene-AC57_RS04590;Name=AC57_RS04590;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS04590;old_locus_tag=AC57_4148 NZ_JJLR01000139.1 cmsearch rRNA 17 2922 . + . ID=rna-AC57_RS04590;Parent=gene-AC57_RS04590;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS04590;product=23S ribosomal RNA NZ_JJLR01000139.1 cmsearch exon 17 2922 . + . ID=exon-AC57_RS04590-1;Parent=rna-AC57_RS04590;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS04590;product=23S ribosomal RNA NZ_JJLR01000139.1 RefSeq gene 3017 3132 . + . ID=gene-AC57_RS04585;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS04585;old_locus_tag=AC57_4151 NZ_JJLR01000139.1 cmsearch rRNA 3017 3132 . + . ID=rna-AC57_RS04585;Parent=gene-AC57_RS04585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS04585;product=5S ribosomal RNA NZ_JJLR01000139.1 cmsearch exon 3017 3132 . + . ID=exon-AC57_RS04585-1;Parent=rna-AC57_RS04585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS04585;product=5S ribosomal RNA NZ_JJLR01000139.1 RefSeq gene 3187 3263 . + . ID=gene-AC57_RS04580;Name=AC57_RS04580;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS04580;old_locus_tag=AC57_4152 NZ_JJLR01000139.1 tRNAscan-SE tRNA 3187 3263 . + . ID=rna-AC57_RS04580;Parent=gene-AC57_RS04580;anticodon=(pos:3221..3223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04580;product=tRNA-Asp NZ_JJLR01000139.1 tRNAscan-SE exon 3187 3263 . + . ID=exon-AC57_RS04580-1;Parent=rna-AC57_RS04580;anticodon=(pos:3221..3223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04580;product=tRNA-Asp NZ_JJLR01000139.1 RefSeq gene 3272 3347 . + . ID=gene-AC57_RS04575;Name=AC57_RS04575;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS04575;old_locus_tag=AC57_4153 NZ_JJLR01000139.1 tRNAscan-SE tRNA 3272 3347 . + . ID=rna-AC57_RS04575;Parent=gene-AC57_RS04575;anticodon=(pos:3305..3307);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04575;product=tRNA-Trp NZ_JJLR01000139.1 tRNAscan-SE exon 3272 3347 . + . ID=exon-AC57_RS04575-1;Parent=rna-AC57_RS04575;anticodon=(pos:3305..3307);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04575;product=tRNA-Trp NZ_JJLR01000139.1 RefSeq gene 3443 4282 . - . ID=gene-AC57_RS04570;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AC57_RS04570;old_locus_tag=AC57_4154 NZ_JJLR01000139.1 Protein Homology CDS 3443 4282 . - 0 ID=cds-WP_001406292.1;Parent=gene-AC57_RS04570;Dbxref=GenBank:WP_001406292.1;Name=WP_001406292.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312725.1;locus_tag=AC57_RS04570;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001406292.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 4401 4739 . + . ID=gene-AC57_RS04565;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AC57_RS04565;old_locus_tag=AC57_4155 NZ_JJLR01000139.1 Protein Homology CDS 4401 4739 . + 0 ID=cds-WP_000841001.1;Parent=gene-AC57_RS04565;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AC57_RS04565;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 4764 6284 . - . ID=gene-AC57_RS04560;Name=yifB;gbkey=Gene;gene=yifB;gene_biotype=protein_coding;locus_tag=AC57_RS04560;old_locus_tag=AC57_4156 NZ_JJLR01000139.1 Protein Homology CDS 4764 6284 . - 0 ID=cds-WP_000058974.1;Parent=gene-AC57_RS04560;Dbxref=GenBank:WP_000058974.1;Name=WP_000058974.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yifB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AC57_RS04560;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_000058974.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 6637 6735 . + . ID=gene-AC57_RS0125350;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AC57_RS0125350 NZ_JJLR01000139.1 Protein Homology CDS 6637 6735 . + 0 ID=cds-WP_001311244.1;Parent=gene-AC57_RS0125350;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AC57_RS0125350;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 6822 6872 . + . ID=gene-AC57_RS30015;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AC57_RS30015 NZ_JJLR01000139.1 Protein Homology CDS 6822 6872 . + 0 ID=cds-WP_001387183.1;Parent=gene-AC57_RS30015;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AC57_RS30015;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 6875 8521 . + . ID=gene-AC57_RS04555;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AC57_RS04555;old_locus_tag=AC57_4157 NZ_JJLR01000139.1 Protein Homology CDS 6875 8521 . + 0 ID=cds-WP_001012603.1;Parent=gene-AC57_RS04555;Dbxref=GenBank:WP_001012603.1;Name=WP_001012603.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AC57_RS04555;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_001012603.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 8518 8781 . + . ID=gene-AC57_RS04550;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AC57_RS04550;old_locus_tag=AC57_4158 NZ_JJLR01000139.1 Protein Homology CDS 8518 8781 . + 0 ID=cds-WP_000983255.1;Parent=gene-AC57_RS04550;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AC57_RS04550;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 8801 9730 . + . ID=gene-AC57_RS04545;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AC57_RS04545;old_locus_tag=AC57_4159 NZ_JJLR01000139.1 Protein Homology CDS 8801 9730 . + 0 ID=cds-WP_000208520.1;Parent=gene-AC57_RS04545;Dbxref=GenBank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AC57_RS04545;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 9795 11645 . + . ID=gene-AC57_RS04540;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AC57_RS04540;old_locus_tag=AC57_4160 NZ_JJLR01000139.1 Protein Homology CDS 9795 11645 . + 0 ID=cds-WP_001127420.1;Parent=gene-AC57_RS04540;Dbxref=GenBank:WP_001127420.1;Name=WP_001127420.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001127420.1;locus_tag=AC57_RS04540;product=dihydroxy-acid dehydratase;protein_id=WP_001127420.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 11648 13192 . + . ID=gene-AC57_RS04535;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AC57_RS04535;old_locus_tag=AC57_4161 NZ_JJLR01000139.1 Protein Homology CDS 11648 13192 . + 0 ID=cds-WP_001460158.1;Parent=gene-AC57_RS04535;Dbxref=GenBank:WP_001460158.1;Name=WP_001460158.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=AC57_RS04535;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_001460158.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 13244 14137 . - . ID=gene-AC57_RS04530;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AC57_RS04530;old_locus_tag=AC57_4162 NZ_JJLR01000139.1 Protein Homology CDS 13244 14137 . - 0 ID=cds-WP_000365774.1;Parent=gene-AC57_RS04530;Dbxref=GenBank:WP_000365774.1;Name=WP_000365774.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418221.1;locus_tag=AC57_RS04530;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365774.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 14287 15762 . + . ID=gene-AC57_RS04525;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AC57_RS04525;old_locus_tag=AC57_4163 NZ_JJLR01000139.1 Protein Homology CDS 14287 15762 . + 0 ID=cds-WP_032279577.1;Parent=gene-AC57_RS04525;Dbxref=GenBank:WP_032279577.1;Name=WP_032279577.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AC57_RS04525;product=ketol-acid reductoisomerase;protein_id=WP_032279577.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 15856 16137 . - . ID=gene-AC57_RS04520;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AC57_RS04520;old_locus_tag=AC57_4164 NZ_JJLR01000139.1 Protein Homology CDS 15856 16137 . - 0 ID=cds-WP_001140251.1;Parent=gene-AC57_RS04520;Dbxref=GenBank:WP_001140251.1;Name=WP_001140251.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AC57_RS04520;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140251.1;transl_table=11 NZ_JJLR01000139.1 RefSeq pseudogene 16336 16784 . - . ID=gene-AC57_RS30020;Name=AC57_RS30020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30020;pseudo=true NZ_JJLR01000139.1 Protein Homology CDS 16336 16784 . - 0 ID=cds-AC57_RS30020;Parent=gene-AC57_RS30020;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312737.1;locus_tag=AC57_RS30020;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 17001 19022 . + . ID=gene-AC57_RS04515;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AC57_RS04515;old_locus_tag=AC57_4166 NZ_JJLR01000139.1 Protein Homology CDS 17001 19022 . + 0 ID=cds-WP_001238890.1;Parent=gene-AC57_RS04515;Dbxref=GenBank:WP_001238890.1;Name=WP_001238890.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026251.1;locus_tag=AC57_RS04515;product=DNA helicase Rep;protein_id=WP_001238890.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 19069 20553 . - . ID=gene-AC57_RS04510;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AC57_RS04510;old_locus_tag=AC57_4167 NZ_JJLR01000139.1 Protein Homology CDS 19069 20553 . - 0 ID=cds-WP_001299253.1;Parent=gene-AC57_RS04510;Dbxref=GenBank:WP_001299253.1;Name=WP_001299253.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AC57_RS04510;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_001299253.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 20687 21952 . - . ID=gene-AC57_RS04505;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AC57_RS04505;old_locus_tag=AC57_4168 NZ_JJLR01000139.1 Protein Homology CDS 20687 21952 . - 0 ID=cds-WP_000047499.1;Parent=gene-AC57_RS04505;Dbxref=GenBank:WP_000047499.1;Name=WP_000047499.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AC57_RS04505;product=ATP-dependent RNA helicase RhlB;protein_id=WP_000047499.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 22083 22412 . + . ID=gene-AC57_RS04500;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AC57_RS04500;old_locus_tag=AC57_4169 NZ_JJLR01000139.1 Protein Homology CDS 22083 22412 . + 0 ID=cds-WP_001280776.1;Parent=gene-AC57_RS04500;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AC57_RS04500;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 22553 22654 . + . ID=gene-AC57_RS0125360;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AC57_RS0125360 NZ_JJLR01000139.1 Protein Homology CDS 22553 22654 . + 0 ID=cds-WP_001295255.1;Parent=gene-AC57_RS0125360;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AC57_RS0125360;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 22739 23998 . + . ID=gene-AC57_RS04495;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AC57_RS04495;old_locus_tag=AC57_4170 NZ_JJLR01000139.1 Protein Homology CDS 22739 23998 . + 0 ID=cds-WP_001054527.1;Parent=gene-AC57_RS04495;Dbxref=GenBank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AC57_RS04495;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 24238 25341 . + . ID=gene-AC57_RS04485;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AC57_RS04485;old_locus_tag=AC57_4172 NZ_JJLR01000139.1 Protein Homology CDS 24238 25341 . + 0 ID=cds-WP_032237254.1;Parent=gene-AC57_RS04485;Dbxref=GenBank:WP_032237254.1;Name=WP_032237254.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AC57_RS04485;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_032237254.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 25353 26399 . + . ID=gene-AC57_RS04480;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AC57_RS04480;old_locus_tag=AC57_4173 NZ_JJLR01000139.1 Protein Homology CDS 25353 26399 . + 0 ID=cds-WP_032279573.1;Parent=gene-AC57_RS04480;Dbxref=GenBank:WP_032279573.1;Name=WP_032279573.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AC57_RS04480;product=ECA polysaccharide chain length modulation protein;protein_id=WP_032279573.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 26455 27585 . + . ID=gene-AC57_RS04475;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AC57_RS04475;old_locus_tag=AC57_4174 NZ_JJLR01000139.1 Protein Homology CDS 26455 27585 . + 0 ID=cds-WP_001340422.1;Parent=gene-AC57_RS04475;Dbxref=GenBank:WP_001340422.1;Name=WP_001340422.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=AC57_RS04475;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_001340422.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 27582 28844 . + . ID=gene-AC57_RS04470;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AC57_RS04470;old_locus_tag=AC57_4175 NZ_JJLR01000139.1 Protein Homology CDS 27582 28844 . + 0 ID=cds-WP_000006621.1;Parent=gene-AC57_RS04470;Dbxref=GenBank:WP_000006621.1;Name=WP_000006621.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AC57_RS04470;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 28844 29911 . + . ID=gene-AC57_RS04465;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AC57_RS04465;old_locus_tag=AC57_4176 NZ_JJLR01000139.1 Protein Homology CDS 28844 29911 . + 0 ID=cds-WP_001226601.1;Parent=gene-AC57_RS04465;Dbxref=GenBank:WP_001226601.1;Name=WP_001226601.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026255.1;locus_tag=AC57_RS04465;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226601.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 29930 30811 . + . ID=gene-AC57_RS04460;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AC57_RS04460;old_locus_tag=AC57_4177 NZ_JJLR01000139.1 Protein Homology CDS 29930 30811 . + 0 ID=cds-WP_000676056.1;Parent=gene-AC57_RS04460;Dbxref=GenBank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AC57_RS04460;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 30789 31463 . + . ID=gene-AC57_RS04455;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AC57_RS04455;old_locus_tag=AC57_4178 NZ_JJLR01000139.1 Protein Homology CDS 30789 31463 . + 0 ID=cds-WP_001145183.1;Parent=gene-AC57_RS04455;Dbxref=GenBank:WP_001145183.1;Name=WP_001145183.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AC57_RS04455;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145183.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 31468 32598 . + . ID=gene-AC57_RS04450;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AC57_RS04450;old_locus_tag=AC57_4179 NZ_JJLR01000139.1 Protein Homology CDS 31468 32598 . + 0 ID=cds-WP_032237253.1;Parent=gene-AC57_RS04450;Dbxref=GenBank:WP_032237253.1;Name=WP_032237253.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AC57_RS04450;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_032237253.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 32600 33850 . + . ID=gene-AC57_RS04445;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AC57_RS04445;old_locus_tag=AC57_4180 NZ_JJLR01000139.1 Protein Homology CDS 32600 33850 . + 0 ID=cds-WP_000050265.1;Parent=gene-AC57_RS04445;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AC57_RS04445;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 33847 34926 . + . ID=gene-AC57_RS04440;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AC57_RS04440;old_locus_tag=AC57_4181 NZ_JJLR01000139.1 Protein Homology CDS 33847 34926 . + 0 ID=cds-WP_000217245.1;Parent=gene-AC57_RS04440;Dbxref=GenBank:WP_000217245.1;Name=WP_000217245.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=AC57_RS04440;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_000217245.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 34923 36275 . + . ID=gene-AC57_RS04435;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AC57_RS04435;old_locus_tag=AC57_4182 NZ_JJLR01000139.1 Protein Homology CDS 34923 36275 . + 0 ID=cds-WP_000055132.1;Parent=gene-AC57_RS04435;Dbxref=GenBank:WP_000055132.1;Name=WP_000055132.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=AC57_RS04435;product=ECA oligosaccharide polymerase;protein_id=WP_000055132.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 36278 37018 . + . ID=gene-AC57_RS04430;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AC57_RS04430;old_locus_tag=AC57_4183 NZ_JJLR01000139.1 Protein Homology CDS 36278 37018 . + 0 ID=cds-WP_001064040.1;Parent=gene-AC57_RS04430;Dbxref=GenBank:WP_001064040.1;Name=WP_001064040.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AC57_RS04430;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064040.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 37209 38594 . + . ID=gene-AC57_RS04425;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AC57_RS04425;old_locus_tag=AC57_4184 NZ_JJLR01000139.1 Protein Homology CDS 37209 38594 . + 0 ID=cds-WP_000774731.1;Parent=gene-AC57_RS04425;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AC57_RS04425;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11 NZ_JJLR01000139.1 RefSeq gene 38697 38773 . + . ID=gene-AC57_RS04420;Name=AC57_RS04420;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS04420;old_locus_tag=AC57_4185 NZ_JJLR01000139.1 tRNAscan-SE tRNA 38697 38773 . + . ID=rna-AC57_RS04420;Parent=gene-AC57_RS04420;anticodon=(pos:38731..38733);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04420;product=tRNA-Arg NZ_JJLR01000139.1 tRNAscan-SE exon 38697 38773 . + . ID=exon-AC57_RS04420-1;Parent=rna-AC57_RS04420;anticodon=(pos:38731..38733);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04420;product=tRNA-Arg NZ_JJLR01000139.1 RefSeq gene 38832 38907 . + . ID=gene-AC57_RS04415;Name=AC57_RS04415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS04415;old_locus_tag=AC57_4186 NZ_JJLR01000139.1 tRNAscan-SE tRNA 38832 38907 . + . ID=rna-AC57_RS04415;Parent=gene-AC57_RS04415;anticodon=(pos:38865..38867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04415;product=tRNA-His NZ_JJLR01000139.1 tRNAscan-SE exon 38832 38907 . + . ID=exon-AC57_RS04415-1;Parent=rna-AC57_RS04415;anticodon=(pos:38865..38867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04415;product=tRNA-His NZ_JJLR01000139.1 RefSeq gene 38928 39014 . + . ID=gene-AC57_RS04410;Name=AC57_RS04410;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS04410;old_locus_tag=AC57_4187 NZ_JJLR01000139.1 tRNAscan-SE tRNA 38928 39014 . + . ID=rna-AC57_RS04410;Parent=gene-AC57_RS04410;anticodon=(pos:38962..38964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04410;product=tRNA-Leu NZ_JJLR01000139.1 tRNAscan-SE exon 38928 39014 . + . ID=exon-AC57_RS04410-1;Parent=rna-AC57_RS04410;anticodon=(pos:38962..38964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04410;product=tRNA-Leu NZ_JJLR01000139.1 RefSeq gene 39057 39133 . + . ID=gene-AC57_RS04405;Name=AC57_RS04405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS04405;old_locus_tag=AC57_4188 NZ_JJLR01000139.1 tRNAscan-SE tRNA 39057 39133 . + . ID=rna-AC57_RS04405;Parent=gene-AC57_RS04405;anticodon=(pos:39091..39093);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04405;product=tRNA-Pro NZ_JJLR01000139.1 tRNAscan-SE exon 39057 39133 . + . ID=exon-AC57_RS04405-1;Parent=rna-AC57_RS04405;anticodon=(pos:39091..39093);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04405;product=tRNA-Pro NZ_JJLR01000139.1 RefSeq gene 39280 40515 . + . ID=gene-AC57_RS04400;Name=AC57_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04400;old_locus_tag=AC57_4189 NZ_JJLR01000139.1 Protein Homology CDS 39280 40515 . + 0 ID=cds-WP_000941517.1;Parent=gene-AC57_RS04400;Dbxref=GenBank:WP_000941517.1;Name=WP_000941517.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026259.1;locus_tag=AC57_RS04400;product=anaerobic sulfatase maturase;protein_id=WP_000941517.1;transl_table=11 ##sequence-region NZ_JJLR01000140.1 1 52882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000140.1 RefSeq region 1 52882 . + . ID=NZ_JJLR01000140.1:1..52882;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000140.1 RefSeq gene 1 1129 . + . ID=gene-AC57_RS04395;Name=AC57_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04395;old_locus_tag=AC57_4190;partial=true;start_range=.,1 NZ_JJLR01000140.1 Protein Homology CDS 1 1129 . + 1 ID=cds-WP_032285747.1;Parent=gene-AC57_RS04395;Dbxref=GenBank:WP_032285747.1;Name=WP_032285747.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026259.1;locus_tag=AC57_RS04395;partial=true;product=anaerobic sulfatase maturase;protein_id=WP_032285747.1;start_range=.,1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 1288 2943 . - . ID=gene-AC57_RS04390;Name=aslA;gbkey=Gene;gene=aslA;gene_biotype=protein_coding;locus_tag=AC57_RS04390;old_locus_tag=AC57_4191 NZ_JJLR01000140.1 Protein Homology CDS 1288 2943 . - 0 ID=cds-WP_000395863.1;Parent=gene-AC57_RS04390;Dbxref=GenBank:WP_000395863.1;Name=WP_000395863.1;gbkey=CDS;gene=aslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418245.1;locus_tag=AC57_RS04390;product=arylsulfatase AslA;protein_id=WP_000395863.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 3622 4821 . - . ID=gene-AC57_RS04385;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AC57_RS04385;old_locus_tag=AC57_4193 NZ_JJLR01000140.1 Protein Homology CDS 3622 4821 . - 0 ID=cds-WP_032285748.1;Parent=gene-AC57_RS04385;Dbxref=GenBank:WP_032285748.1;Name=WP_032285748.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AC57_RS04385;product=protoheme IX biogenesis protein HemY;protein_id=WP_032285748.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 4824 6005 . - . ID=gene-AC57_RS04380;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AC57_RS04380;old_locus_tag=AC57_4194 NZ_JJLR01000140.1 Protein Homology CDS 4824 6005 . - 0 ID=cds-WP_001618971.1;Parent=gene-AC57_RS04380;Dbxref=GenBank:WP_001618971.1;Name=WP_001618971.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312760.1;locus_tag=AC57_RS04380;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_001618971.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 6027 6767 . - . ID=gene-AC57_RS04375;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AC57_RS04375;old_locus_tag=AC57_4195 NZ_JJLR01000140.1 Protein Homology CDS 6027 6767 . - 0 ID=cds-WP_000026049.1;Parent=gene-AC57_RS04375;Dbxref=GenBank:WP_000026049.1;Name=WP_000026049.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312761.1;locus_tag=AC57_RS04375;product=uroporphyrinogen-III synthase;protein_id=WP_000026049.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 6764 7705 . - . ID=gene-AC57_RS04370;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AC57_RS04370;old_locus_tag=AC57_4196 NZ_JJLR01000140.1 Protein Homology CDS 6764 7705 . - 0 ID=cds-WP_001338644.1;Parent=gene-AC57_RS04370;Dbxref=GenBank:WP_001338644.1;Name=WP_001338644.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AC57_RS04370;product=hydroxymethylbilane synthase;protein_id=WP_001338644.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 8092 10638 . + . ID=gene-AC57_RS04365;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AC57_RS04365;old_locus_tag=AC57_4197 NZ_JJLR01000140.1 Protein Homology CDS 8092 10638 . + 0 ID=cds-WP_000281668.1;Parent=gene-AC57_RS04365;Dbxref=GenBank:WP_000281668.1;Name=WP_000281668.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418250.1;locus_tag=AC57_RS04365;product=class I adenylate cyclase;protein_id=WP_000281668.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 10678 10998 . - . ID=gene-AC57_RS04360;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AC57_RS04360;old_locus_tag=AC57_4198 NZ_JJLR01000140.1 Protein Homology CDS 10678 10998 . - 0 ID=cds-WP_000999947.1;Parent=gene-AC57_RS04360;Dbxref=GenBank:WP_000999947.1;Name=WP_000999947.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AC57_RS04360;product=iron donor protein CyaY;protein_id=WP_000999947.1;transl_table=11 NZ_JJLR01000140.1 RefSeq pseudogene 11124 11302 . - . ID=gene-AC57_RS30865;Name=AC57_RS30865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30865;partial=true;pseudo=true;start_range=.,11124 NZ_JJLR01000140.1 Protein Homology CDS 11124 11302 . - 0 ID=cds-AC57_RS30865;Parent=gene-AC57_RS30865;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AC57_RS30865;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,11124;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 11461 11664 . + . ID=gene-AC57_RS04355;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AC57_RS04355;old_locus_tag=AC57_4200 NZ_JJLR01000140.1 Protein Homology CDS 11461 11664 . + 0 ID=cds-WP_000799889.1;Parent=gene-AC57_RS04355;Dbxref=GenBank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AC57_RS04355;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799889.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 11701 12525 . + . ID=gene-AC57_RS04350;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AC57_RS04350;old_locus_tag=AC57_4201 NZ_JJLR01000140.1 Protein Homology CDS 11701 12525 . + 0 ID=cds-WP_001160654.1;Parent=gene-AC57_RS04350;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AC57_RS04350;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 12522 13229 . + . ID=gene-AC57_RS04345;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AC57_RS04345;old_locus_tag=AC57_4202 NZ_JJLR01000140.1 Protein Homology CDS 12522 13229 . + 0 ID=cds-WP_000812796.1;Parent=gene-AC57_RS04345;Dbxref=GenBank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AC57_RS04345;product=DUF484 domain-containing protein;protein_id=WP_000812796.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 13226 14122 . + . ID=gene-AC57_RS04340;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AC57_RS04340;old_locus_tag=AC57_4203 NZ_JJLR01000140.1 Protein Homology CDS 13226 14122 . + 0 ID=cds-WP_000130691.1;Parent=gene-AC57_RS04340;Dbxref=GenBank:WP_000130691.1;Name=WP_000130691.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418256.1;locus_tag=AC57_RS04340;product=tyrosine recombinase XerC;protein_id=WP_000130691.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 14122 14838 . + . ID=gene-AC57_RS04335;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AC57_RS04335;old_locus_tag=AC57_4204 NZ_JJLR01000140.1 Protein Homology CDS 14122 14838 . + 0 ID=cds-WP_001213584.1;Parent=gene-AC57_RS04335;Dbxref=GenBank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AC57_RS04335;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 14922 17084 . + . ID=gene-AC57_RS04330;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AC57_RS04330;old_locus_tag=AC57_4205 NZ_JJLR01000140.1 Protein Homology CDS 14922 17084 . + 0 ID=cds-WP_000383406.1;Parent=gene-AC57_RS04330;Dbxref=GenBank:WP_000383406.1;Name=WP_000383406.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=AC57_RS04330;product=DNA helicase II;protein_id=WP_000383406.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 17231 17995 . - . ID=gene-AC57_RS04325;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AC57_RS04325;old_locus_tag=AC57_4206 NZ_JJLR01000140.1 Protein Homology CDS 17231 17995 . - 0 ID=cds-WP_000951133.1;Parent=gene-AC57_RS04325;Dbxref=GenBank:WP_000951133.1;Name=WP_000951133.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026261.1;locus_tag=AC57_RS04325;product=phosphodiester glycosidase family protein;protein_id=WP_000951133.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 18157 18213 . + . ID=gene-AC57_RS30580;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AC57_RS30580 NZ_JJLR01000140.1 Protein Homology CDS 18157 18213 . + 0 ID=cds-WP_211180520.1;Parent=gene-AC57_RS30580;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AC57_RS30580;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 18365 19315 . + . ID=gene-AC57_RS04315;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AC57_RS04315;old_locus_tag=AC57_4208 NZ_JJLR01000140.1 Protein Homology CDS 18365 19315 . + 0 ID=cds-WP_000947159.1;Parent=gene-AC57_RS04315;Dbxref=GenBank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AC57_RS04315;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 19358 19738 . - . ID=gene-AC57_RS04310;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AC57_RS04310;old_locus_tag=AC57_4209 NZ_JJLR01000140.1 Protein Homology CDS 19358 19738 . - 0 ID=cds-WP_000032581.1;Parent=gene-AC57_RS04310;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AC57_RS04310;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 19752 20132 . - . ID=gene-AC57_RS04305;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AC57_RS04305;old_locus_tag=AC57_4210 NZ_JJLR01000140.1 Protein Homology CDS 19752 20132 . - 0 ID=cds-WP_000944218.1;Parent=gene-AC57_RS04305;Dbxref=GenBank:WP_000944218.1;Name=WP_000944218.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AC57_RS04305;product=protein YigG;protein_id=WP_000944218.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 20227 21117 . - . ID=gene-AC57_RS04300;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AC57_RS04300;old_locus_tag=AC57_4211 NZ_JJLR01000140.1 Protein Homology CDS 20227 21117 . - 0 ID=cds-WP_000339104.1;Parent=gene-AC57_RS04300;Dbxref=GenBank:WP_000339104.1;Name=WP_000339104.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026262.1;locus_tag=AC57_RS04300;product=EamA family transporter RarD;protein_id=WP_000339104.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 21169 21636 . - . ID=gene-AC57_RS04295;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AC57_RS04295;old_locus_tag=AC57_4212 NZ_JJLR01000140.1 Protein Homology CDS 21169 21636 . - 0 ID=cds-WP_001277142.1;Parent=gene-AC57_RS04295;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AC57_RS04295;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 21801 22670 . + . ID=gene-AC57_RS04290;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AC57_RS04290;old_locus_tag=AC57_4213 NZ_JJLR01000140.1 Protein Homology CDS 21801 22670 . + 0 ID=cds-WP_001259700.1;Parent=gene-AC57_RS04290;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AC57_RS04290;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 22803 24632 . + . ID=gene-AC57_RS04285;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AC57_RS04285;old_locus_tag=AC57_4214 NZ_JJLR01000140.1 Protein Homology CDS 22803 24632 . + 0 ID=cds-WP_000035581.1;Parent=gene-AC57_RS04285;Dbxref=GenBank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AC57_RS04285;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 24696 25316 . + . ID=gene-AC57_RS04280;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AC57_RS04280;old_locus_tag=AC57_4215 NZ_JJLR01000140.1 Protein Homology CDS 24696 25316 . + 0 ID=cds-WP_000928824.1;Parent=gene-AC57_RS04280;Dbxref=GenBank:WP_000928824.1;Name=WP_000928824.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AC57_RS04280;product=threonine export protein RhtC;protein_id=WP_000928824.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 25378 25998 . - . ID=gene-AC57_RS04275;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AC57_RS04275;old_locus_tag=AC57_4216 NZ_JJLR01000140.1 Protein Homology CDS 25378 25998 . - 0 ID=cds-WP_032279566.1;Parent=gene-AC57_RS04275;Dbxref=GenBank:WP_032279566.1;Name=WP_032279566.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AC57_RS04275;product=homoserine/homoserine lactone efflux protein;protein_id=WP_032279566.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 26109 27131 . + . ID=gene-AC57_RS04270;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AC57_RS04270;old_locus_tag=AC57_4217 NZ_JJLR01000140.1 Protein Homology CDS 26109 27131 . + 0 ID=cds-WP_000487654.1;Parent=gene-AC57_RS04270;Dbxref=GenBank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AC57_RS04270;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 27139 27939 . + . ID=gene-AC57_RS04265;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AC57_RS04265;old_locus_tag=AC57_4218 NZ_JJLR01000140.1 Protein Homology CDS 27139 27939 . + 0 ID=cds-WP_000285362.1;Parent=gene-AC57_RS04265;Dbxref=GenBank:WP_000285362.1;Name=WP_000285362.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026267.1;locus_tag=AC57_RS04265;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_000285362.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 28015 28914 . + . ID=gene-AC57_RS04260;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AC57_RS04260;old_locus_tag=AC57_4219 NZ_JJLR01000140.1 Protein Homology CDS 28015 28914 . + 0 ID=cds-WP_001196238.1;Parent=gene-AC57_RS04260;Dbxref=GenBank:WP_001196238.1;Name=WP_001196238.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AC57_RS04260;product=biotin transporter;protein_id=WP_001196238.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 28802 29755 . - . ID=gene-AC57_RS0125365;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AC57_RS0125365 NZ_JJLR01000140.1 Protein Homology CDS 28802 29755 . - 0 ID=cds-WP_000573621.1;Parent=gene-AC57_RS0125365;Dbxref=GenBank:WP_000573621.1;Name=WP_000573621.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AC57_RS0125365;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573621.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 29992 32253 . + . ID=gene-AC57_RS04255;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AC57_RS04255;old_locus_tag=AC57_4220 NZ_JJLR01000140.1 Protein Homology CDS 29992 32253 . + 0 ID=cds-WP_000153907.1;Parent=gene-AC57_RS04255;Dbxref=GenBank:WP_000153907.1;Name=WP_000153907.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418273.1;locus_tag=AC57_RS04255;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_000153907.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 32293 33108 . - . ID=gene-AC57_RS04250;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AC57_RS04250;old_locus_tag=AC57_4221 NZ_JJLR01000140.1 Protein Homology CDS 32293 33108 . - 0 ID=cds-WP_001300821.1;Parent=gene-AC57_RS04250;Dbxref=GenBank:WP_001300821.1;Name=WP_001300821.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312787.2;locus_tag=AC57_RS04250;product=dienelactone hydrolase family protein;protein_id=WP_001300821.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 33370 34131 . + . ID=gene-AC57_RS04245;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AC57_RS04245;old_locus_tag=AC57_4222 NZ_JJLR01000140.1 Protein Homology CDS 33370 34131 . + 0 ID=cds-WP_000045180.1;Parent=gene-AC57_RS04245;Dbxref=GenBank:WP_000045180.1;Name=WP_000045180.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312788.1;locus_tag=AC57_RS04245;product=uridine phosphorylase;protein_id=WP_000045180.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 34272 35699 . + . ID=gene-AC57_RS04240;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AC57_RS04240;old_locus_tag=AC57_4223 NZ_JJLR01000140.1 Protein Homology CDS 34272 35699 . + 0 ID=cds-WP_032285749.1;Parent=gene-AC57_RS04240;Dbxref=GenBank:WP_032285749.1;Name=WP_032285749.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AC57_RS04240;product=DNA recombination protein RmuC;protein_id=WP_032285749.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 35794 36549 . + . ID=gene-AC57_RS04235;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AC57_RS04235;old_locus_tag=AC57_4224 NZ_JJLR01000140.1 Protein Homology CDS 35794 36549 . + 0 ID=cds-WP_000227958.1;Parent=gene-AC57_RS04235;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AC57_RS04235;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 36563 37168 . + . ID=gene-AC57_RS04230;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AC57_RS04230;old_locus_tag=AC57_4225 NZ_JJLR01000140.1 Protein Homology CDS 36563 37168 . + 0 ID=cds-WP_001295259.1;Parent=gene-AC57_RS04230;Dbxref=GenBank:WP_001295259.1;Name=WP_001295259.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AC57_RS04230;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_001295259.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 37165 38805 . + . ID=gene-AC57_RS04225;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AC57_RS04225;old_locus_tag=AC57_4226 NZ_JJLR01000140.1 Protein Homology CDS 37165 38805 . + 0 ID=cds-WP_000187535.1;Parent=gene-AC57_RS04225;Dbxref=GenBank:WP_000187535.1;Name=WP_000187535.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AC57_RS04225;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_000187535.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 38884 39153 . + . ID=gene-AC57_RS04220;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AC57_RS04220;old_locus_tag=AC57_4227 NZ_JJLR01000140.1 Protein Homology CDS 38884 39153 . + 0 ID=cds-WP_001295260.1;Parent=gene-AC57_RS04220;Dbxref=GenBank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AC57_RS04220;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 39157 39672 . + . ID=gene-AC57_RS04215;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AC57_RS04215;old_locus_tag=AC57_4228 NZ_JJLR01000140.1 Protein Homology CDS 39157 39672 . + 0 ID=cds-WP_001724133.1;Parent=gene-AC57_RS04215;Dbxref=GenBank:WP_001724133.1;Name=WP_001724133.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AC57_RS04215;product=Sec-independent protein translocase protein TatB;protein_id=WP_001724133.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 39675 40451 . + . ID=gene-AC57_RS04210;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AC57_RS04210;old_locus_tag=AC57_4229 NZ_JJLR01000140.1 Protein Homology CDS 39675 40451 . + 0 ID=cds-WP_000109943.1;Parent=gene-AC57_RS04210;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AC57_RS04210;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 40493 41275 . + . ID=gene-AC57_RS04205;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AC57_RS04205;old_locus_tag=AC57_4230 NZ_JJLR01000140.1 Protein Homology CDS 40493 41275 . + 0 ID=cds-WP_001299486.1;Parent=gene-AC57_RS04205;Dbxref=GenBank:WP_001299486.1;Name=WP_001299486.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709645.2;locus_tag=AC57_RS04205;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_001299486.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 41272 41760 . - . ID=gene-AC57_RS04200;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AC57_RS04200;old_locus_tag=AC57_4231 NZ_JJLR01000140.1 Protein Homology CDS 41272 41760 . - 0 ID=cds-WP_001192396.1;Parent=gene-AC57_RS04200;Dbxref=GenBank:WP_001192396.1;Name=WP_001192396.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AC57_RS04200;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_001192396.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 41927 43420 . + . ID=gene-AC57_RS04195;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AC57_RS04195;old_locus_tag=AC57_4232 NZ_JJLR01000140.1 Protein Homology CDS 41927 43420 . + 0 ID=cds-WP_000339804.1;Parent=gene-AC57_RS04195;Dbxref=GenBank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AC57_RS04195;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 43466 44167 . + . ID=gene-AC57_RS04190;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AC57_RS04190;old_locus_tag=AC57_4233 NZ_JJLR01000140.1 Protein Homology CDS 43466 44167 . + 0 ID=cds-WP_000209826.1;Parent=gene-AC57_RS04190;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AC57_RS04190;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 44449 45612 . - . ID=gene-AC57_RS04185;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AC57_RS04185;old_locus_tag=AC57_4234 NZ_JJLR01000140.1 Protein Homology CDS 44449 45612 . - 0 ID=cds-WP_000438725.1;Parent=gene-AC57_RS04185;Dbxref=GenBank:WP_000438725.1;Name=WP_000438725.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026272.1;locus_tag=AC57_RS04185;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438725.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 45622 47811 . - . ID=gene-AC57_RS04180;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AC57_RS04180;old_locus_tag=AC57_4235 NZ_JJLR01000140.1 Protein Homology CDS 45622 47811 . - 0 ID=cds-WP_032279565.1;Parent=gene-AC57_RS04180;Dbxref=GenBank:WP_032279565.1;Name=WP_032279565.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418288.1;locus_tag=AC57_RS04180;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_032279565.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 48001 49332 . + . ID=gene-AC57_RS04175;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AC57_RS04175;old_locus_tag=AC57_4236 NZ_JJLR01000140.1 Protein Homology CDS 48001 49332 . + 0 ID=cds-WP_000444561.1;Parent=gene-AC57_RS04175;Dbxref=GenBank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AC57_RS04175;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 49332 49946 . + . ID=gene-AC57_RS04170;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=AC57_RS04170;old_locus_tag=AC57_4237 NZ_JJLR01000140.1 Protein Homology CDS 49332 49946 . + 0 ID=cds-WP_001308167.1;Parent=gene-AC57_RS04170;Dbxref=GenBank:WP_001308167.1;Name=WP_001308167.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418290.4;locus_tag=AC57_RS04170;product=IMPACT family protein;protein_id=WP_001308167.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 49985 51436 . + . ID=gene-AC57_RS04165;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AC57_RS04165;old_locus_tag=AC57_4238 NZ_JJLR01000140.1 Protein Homology CDS 49985 51436 . + 0 ID=cds-WP_000545677.1;Parent=gene-AC57_RS04165;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AC57_RS04165;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 51448 51993 . + . ID=gene-AC57_RS04160;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AC57_RS04160;old_locus_tag=AC57_4239 NZ_JJLR01000140.1 Protein Homology CDS 51448 51993 . + 0 ID=cds-WP_000853959.1;Parent=gene-AC57_RS04160;Dbxref=GenBank:WP_000853959.1;Name=WP_000853959.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AC57_RS04160;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853959.1;transl_table=11 NZ_JJLR01000140.1 RefSeq gene 52371 52882 . + . ID=gene-AC57_RS0125370;Name=AC57_RS0125370;end_range=52882,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS0125370;partial=true NZ_JJLR01000140.1 cmsearch rRNA 52371 52882 . + . ID=rna-AC57_RS0125370;Parent=gene-AC57_RS0125370;Dbxref=RFAM:RF00177;end_range=52882,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125370;partial=true;product=16S ribosomal RNA NZ_JJLR01000140.1 cmsearch exon 52371 52882 . + . ID=exon-AC57_RS0125370-1;Parent=rna-AC57_RS0125370;Dbxref=RFAM:RF00177;end_range=52882,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125370;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLR01000141.1 1 903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000141.1 RefSeq region 1 903 . + . ID=NZ_JJLR01000141.1:1..903;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000141.1 RefSeq gene 1 99 . + . ID=gene-AC57_RS26095;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS26095;old_locus_tag=AC57_4240;partial=true;start_range=.,1 NZ_JJLR01000141.1 cmsearch rRNA 1 99 . + . ID=rna-AC57_RS26095;Parent=gene-AC57_RS26095;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26095;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJLR01000141.1 cmsearch exon 1 99 . + . ID=exon-AC57_RS26095-1;Parent=rna-AC57_RS26095;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26095;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJLR01000141.1 RefSeq gene 114 189 . + . ID=gene-AC57_RS04155;Name=AC57_RS04155;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS04155;old_locus_tag=AC57_4241 NZ_JJLR01000141.1 tRNAscan-SE tRNA 114 189 . + . ID=rna-AC57_RS04155;Parent=gene-AC57_RS04155;anticodon=(pos:147..149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04155;product=tRNA-Thr NZ_JJLR01000141.1 tRNAscan-SE exon 114 189 . + . ID=exon-AC57_RS04155-1;Parent=rna-AC57_RS04155;anticodon=(pos:147..149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS04155;product=tRNA-Thr NZ_JJLR01000141.1 RefSeq gene 229 344 . + . ID=gene-AC57_RS04150;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS04150;old_locus_tag=AC57_4242 NZ_JJLR01000141.1 cmsearch rRNA 229 344 . + . ID=rna-AC57_RS04150;Parent=gene-AC57_RS04150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS04150;product=5S ribosomal RNA NZ_JJLR01000141.1 cmsearch exon 229 344 . + . ID=exon-AC57_RS04150-1;Parent=rna-AC57_RS04150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS04150;product=5S ribosomal RNA NZ_JJLR01000141.1 RefSeq gene 421 804 . + . ID=gene-AC57_RS04145;Name=AC57_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS04145;old_locus_tag=AC57_4243 NZ_JJLR01000141.1 Protein Homology CDS 421 804 . + 0 ID=cds-WP_001326558.1;Parent=gene-AC57_RS04145;Dbxref=GenBank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AC57_RS04145;product=YjaA family stress response protein;protein_id=WP_001326558.1;transl_table=11 ##sequence-region NZ_JJLR01000142.1 1 4657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000142.1 RefSeq region 1 4657 . + . ID=NZ_JJLR01000142.1:1..4657;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000142.1 RefSeq gene 295 822 . - . ID=gene-AC57_RS04140;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AC57_RS04140;old_locus_tag=AC57_4244 NZ_JJLR01000142.1 Protein Homology CDS 295 822 . - 0 ID=cds-WP_000907622.1;Parent=gene-AC57_RS04140;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AC57_RS04140;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JJLR01000142.1 RefSeq gene 804 1388 . - . ID=gene-AC57_RS04135;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AC57_RS04135;old_locus_tag=AC57_4245 NZ_JJLR01000142.1 Protein Homology CDS 804 1388 . - 0 ID=cds-WP_001612084.1;Parent=gene-AC57_RS04135;Dbxref=GenBank:WP_001612084.1;Name=WP_001612084.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312807.1;locus_tag=AC57_RS04135;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001612084.1;transl_table=11 NZ_JJLR01000142.1 RefSeq gene 1458 1727 . + . ID=gene-AC57_RS04130;Name=yihD;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=AC57_RS04130;old_locus_tag=AC57_4246 NZ_JJLR01000142.1 Protein Homology CDS 1458 1727 . + 0 ID=cds-WP_001295263.1;Parent=gene-AC57_RS04130;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;gene=yihD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AC57_RS04130;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JJLR01000142.1 RefSeq gene 1804 2790 . + . ID=gene-AC57_RS04125;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AC57_RS04125;old_locus_tag=AC57_4247 NZ_JJLR01000142.1 Protein Homology CDS 1804 2790 . + 0 ID=cds-WP_032238004.1;Parent=gene-AC57_RS04125;Dbxref=GenBank:WP_032238004.1;Name=WP_032238004.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312809.1;locus_tag=AC57_RS04125;product=stress response kinase SrkA;protein_id=WP_032238004.1;transl_table=11 NZ_JJLR01000142.1 RefSeq gene 2807 3433 . + . ID=gene-AC57_RS04120;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AC57_RS04120;old_locus_tag=AC57_4248 NZ_JJLR01000142.1 Protein Homology CDS 2807 3433 . + 0 ID=cds-WP_000725347.1;Parent=gene-AC57_RS04120;Dbxref=GenBank:WP_000725347.1;Name=WP_000725347.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AC57_RS04120;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725347.1;transl_table=11 NZ_JJLR01000142.1 RefSeq pseudogene 3588 4391 . + . ID=gene-AC57_RS04115;Name=AC57_RS04115;end_range=4391,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS04115;old_locus_tag=AC57_4250;partial=true;pseudo=true NZ_JJLR01000142.1 Protein Homology CDS 3588 4391 . + 0 ID=cds-AC57_RS04115;Parent=gene-AC57_RS04115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418298.4;locus_tag=AC57_RS04115;partial=true;product=DUF945 family protein;pseudo=true;transl_table=11 NZ_JJLR01000142.1 RefSeq gene 4407 4657 . - . ID=gene-AC57_RS28040;Name=AC57_RS28040;end_range=4657,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28040;partial=true NZ_JJLR01000142.1 Protein Homology CDS 4407 4657 . - 2 ID=cds-WP_000674744.1-10;Parent=gene-AC57_RS28040;Dbxref=GenBank:WP_000674744.1;Name=WP_000674744.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4657,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS28040;partial=true;product=IS1 family transposase;protein_id=WP_000674744.1;transl_table=11 ##sequence-region NZ_JJLR01000143.1 1 34251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000143.1 RefSeq region 1 34251 . + . ID=NZ_JJLR01000143.1:1..34251;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000143.1 RefSeq pseudogene 1 292 . - . ID=gene-AC57_RS0125380;Name=AC57_RS0125380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125380;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000143.1 Protein Homology CDS 1 292 . - 0 ID=cds-AC57_RS0125380;Parent=gene-AC57_RS0125380;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0125380;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000143.1 RefSeq pseudogene 342 983 . + . ID=gene-AC57_RS04110;Name=AC57_RS04110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS04110;old_locus_tag=AC57_4252;partial=true;pseudo=true;start_range=.,342 NZ_JJLR01000143.1 Protein Homology CDS 342 983 . + 0 ID=cds-AC57_RS04110;Parent=gene-AC57_RS04110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312811.2;locus_tag=AC57_RS04110;partial=true;product=DUF945 family protein;pseudo=true;start_range=.,342;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 1024 1956 . - . ID=gene-AC57_RS04105;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=AC57_RS04105;old_locus_tag=AC57_4253 NZ_JJLR01000143.1 Protein Homology CDS 1024 1956 . - 0 ID=cds-WP_001313432.1;Parent=gene-AC57_RS04105;Dbxref=GenBank:WP_001313432.1;Name=WP_001313432.1;Ontology_term=GO:0016746;gbkey=CDS;gene=yihG;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=AC57_RS04105;product=acyltransferase;protein_id=WP_001313432.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 2320 5106 . + . ID=gene-AC57_RS04100;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AC57_RS04100;old_locus_tag=AC57_4255 NZ_JJLR01000143.1 Protein Homology CDS 2320 5106 . + 0 ID=cds-WP_032237891.1;Parent=gene-AC57_RS04100;Dbxref=GenBank:WP_032237891.1;Name=WP_032237891.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312813.1;locus_tag=AC57_RS04100;product=DNA polymerase I;protein_id=WP_032237891.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 5488 6120 . - . ID=gene-AC57_RS04095;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AC57_RS04095;old_locus_tag=AC57_4257 NZ_JJLR01000143.1 Protein Homology CDS 5488 6120 . - 0 ID=cds-WP_000183349.1;Parent=gene-AC57_RS04095;Dbxref=GenBank:WP_000183349.1;Name=WP_000183349.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AC57_RS04095;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_000183349.1;transl_table=11 NZ_JJLR01000143.1 RefSeq pseudogene 6417 6583 . + . ID=gene-AC57_RS30870;Name=AC57_RS30870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30870;pseudo=true NZ_JJLR01000143.1 Protein Homology CDS 6417 6583 . + 0 ID=cds-AC57_RS30870;Parent=gene-AC57_RS30870;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AC57_RS30870;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 6702 7208 . + . ID=gene-AC57_RS04090;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AC57_RS04090;old_locus_tag=AC57_4258 NZ_JJLR01000143.1 Protein Homology CDS 6702 7208 . + 0 ID=cds-WP_001351964.1;Parent=gene-AC57_RS04090;Dbxref=GenBank:WP_001351964.1;Name=WP_001351964.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312815.1;locus_tag=AC57_RS04090;product=Der GTPase-activating protein YihI;protein_id=WP_001351964.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 7397 8770 . + . ID=gene-AC57_RS04085;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AC57_RS04085;old_locus_tag=AC57_4260 NZ_JJLR01000143.1 Protein Homology CDS 7397 8770 . + 0 ID=cds-WP_000116090.1;Parent=gene-AC57_RS04085;Dbxref=GenBank:WP_000116090.1;Name=WP_000116090.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AC57_RS04085;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_000116090.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 8999 9109 . - . ID=gene-AC57_RS0125390;Name=yshB;gbkey=Gene;gene=yshB;gene_biotype=protein_coding;locus_tag=AC57_RS0125390 NZ_JJLR01000143.1 Protein Homology CDS 8999 9109 . - 0 ID=cds-WP_000893994.1;Parent=gene-AC57_RS0125390;Dbxref=GenBank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;gene=yshB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AC57_RS0125390;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 9221 10630 . - . ID=gene-AC57_RS04080;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AC57_RS04080;old_locus_tag=AC57_4263 NZ_JJLR01000143.1 Protein Homology CDS 9221 10630 . - 0 ID=cds-WP_001188777.1;Parent=gene-AC57_RS04080;Dbxref=GenBank:WP_001188777.1;Name=WP_001188777.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AC57_RS04080;product=nitrogen regulation protein NR(I);protein_id=WP_001188777.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 10642 11691 . - . ID=gene-AC57_RS04075;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AC57_RS04075;old_locus_tag=AC57_4264 NZ_JJLR01000143.1 Protein Homology CDS 10642 11691 . - 0 ID=cds-WP_000190577.1;Parent=gene-AC57_RS04075;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AC57_RS04075;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 11977 13386 . - . ID=gene-AC57_RS04070;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AC57_RS04070;old_locus_tag=AC57_4265 NZ_JJLR01000143.1 Protein Homology CDS 11977 13386 . - 0 ID=cds-WP_001271717.1;Parent=gene-AC57_RS04070;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AC57_RS04070;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 13759 15582 . + . ID=gene-AC57_RS04065;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AC57_RS04065;old_locus_tag=AC57_4266 NZ_JJLR01000143.1 Protein Homology CDS 13759 15582 . + 0 ID=cds-WP_000570668.1;Parent=gene-AC57_RS04065;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AC57_RS04065;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 15799 16509 . + . ID=gene-AC57_RS04060;Name=yihL;gbkey=Gene;gene=yihL;gene_biotype=protein_coding;locus_tag=AC57_RS04060;old_locus_tag=AC57_4267 NZ_JJLR01000143.1 Protein Homology CDS 15799 16509 . + 0 ID=cds-WP_000829798.1;Parent=gene-AC57_RS04060;Dbxref=GenBank:WP_000829798.1;Name=WP_000829798.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yihL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312821.1;locus_tag=AC57_RS04060;product=GntR family transcriptional regulator;protein_id=WP_000829798.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 16517 17497 . + . ID=gene-AC57_RS04055;Name=yihM;gbkey=Gene;gene=yihM;gene_biotype=protein_coding;locus_tag=AC57_RS04055;old_locus_tag=AC57_4268 NZ_JJLR01000143.1 Protein Homology CDS 16517 17497 . + 0 ID=cds-WP_000256396.1;Parent=gene-AC57_RS04055;Dbxref=GenBank:WP_000256396.1;Name=WP_000256396.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;gene=yihM;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418309.1;locus_tag=AC57_RS04055;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_000256396.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 17599 18864 . + . ID=gene-AC57_RS04050;Name=yihN;gbkey=Gene;gene=yihN;gene_biotype=protein_coding;locus_tag=AC57_RS04050;old_locus_tag=AC57_4269 NZ_JJLR01000143.1 Protein Homology CDS 17599 18864 . + 0 ID=cds-WP_000956313.1;Parent=gene-AC57_RS04050;Dbxref=GenBank:WP_000956313.1;Name=WP_000956313.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yihN;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418310.1;locus_tag=AC57_RS04050;product=MFS transporter;protein_id=WP_000956313.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 18955 19647 . - . ID=gene-AC57_RS04045;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=AC57_RS04045;old_locus_tag=AC57_4270 NZ_JJLR01000143.1 Protein Homology CDS 18955 19647 . - 0 ID=cds-WP_000723465.1;Parent=gene-AC57_RS04045;Dbxref=GenBank:WP_000723465.1;Name=WP_000723465.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418311.1;locus_tag=AC57_RS04045;product=porin OmpL;protein_id=WP_000723465.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 19715 21118 . - . ID=gene-AC57_RS04040;Name=yihO;gbkey=Gene;gene=yihO;gene_biotype=protein_coding;locus_tag=AC57_RS04040;old_locus_tag=AC57_4271 NZ_JJLR01000143.1 Protein Homology CDS 19715 21118 . - 0 ID=cds-WP_001295267.1;Parent=gene-AC57_RS04040;Dbxref=GenBank:WP_001295267.1;Name=WP_001295267.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihO;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026275.1;locus_tag=AC57_RS04040;product=MFS transporter;protein_id=WP_001295267.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 21161 22546 . - . ID=gene-AC57_RS04035;Name=yihP;gbkey=Gene;gene=yihP;gene_biotype=protein_coding;locus_tag=AC57_RS04035;old_locus_tag=AC57_4272 NZ_JJLR01000143.1 Protein Homology CDS 21161 22546 . - 0 ID=cds-WP_000018380.1;Parent=gene-AC57_RS04035;Dbxref=GenBank:WP_000018380.1;Name=WP_000018380.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yihP;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418313.4;locus_tag=AC57_RS04035;product=MFS transporter;protein_id=WP_000018380.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 22592 24628 . - . ID=gene-AC57_RS04030;Name=yihQ;gbkey=Gene;gene=yihQ;gene_biotype=protein_coding;locus_tag=AC57_RS04030;old_locus_tag=AC57_4273 NZ_JJLR01000143.1 Protein Homology CDS 22592 24628 . - 0 ID=cds-WP_000380843.1;Parent=gene-AC57_RS04030;Dbxref=GenBank:WP_000380843.1;Name=WP_000380843.1;gbkey=CDS;gene=yihQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418314.1;locus_tag=AC57_RS04030;product=sulfoquinovosidase;protein_id=WP_000380843.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 24827 25729 . - . ID=gene-AC57_RS04025;Name=yihR;gbkey=Gene;gene=yihR;gene_biotype=protein_coding;locus_tag=AC57_RS04025;old_locus_tag=AC57_4274 NZ_JJLR01000143.1 Protein Homology CDS 24827 25729 . - 0 ID=cds-WP_001295268.1;Parent=gene-AC57_RS04025;Dbxref=GenBank:WP_001295268.1;Name=WP_001295268.1;gbkey=CDS;gene=yihR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709679.2;locus_tag=AC57_RS04025;product=aldose-1-epimerase;protein_id=WP_001295268.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 25867 27108 . - . ID=gene-AC57_RS04020;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=AC57_RS04020;old_locus_tag=AC57_4275 NZ_JJLR01000143.1 Protein Homology CDS 25867 27108 . - 0 ID=cds-WP_000870916.1;Parent=gene-AC57_RS04020;Dbxref=GenBank:WP_000870916.1;Name=WP_000870916.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418316.4;locus_tag=AC57_RS04020;product=sulfoquinovose isomerase;protein_id=WP_000870916.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 27125 28003 . - . ID=gene-AC57_RS04015;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=AC57_RS04015;old_locus_tag=AC57_4276 NZ_JJLR01000143.1 Protein Homology CDS 27125 28003 . - 0 ID=cds-WP_001046453.1;Parent=gene-AC57_RS04015;Dbxref=GenBank:WP_001046453.1;Name=WP_001046453.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418317.1;locus_tag=AC57_RS04015;product=sulfofructosephosphate aldolase;protein_id=WP_001046453.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 28027 28923 . - . ID=gene-AC57_RS04010;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=AC57_RS04010;old_locus_tag=AC57_4277 NZ_JJLR01000143.1 Protein Homology CDS 28027 28923 . - 0 ID=cds-WP_000718893.1;Parent=gene-AC57_RS04010;Dbxref=GenBank:WP_000718893.1;Name=WP_000718893.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418318.1;locus_tag=AC57_RS04010;product=sulfolactaldehyde 3-reductase;protein_id=WP_000718893.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 29091 29987 . + . ID=gene-AC57_RS04005;Name=yihV;gbkey=Gene;gene=yihV;gene_biotype=protein_coding;locus_tag=AC57_RS04005;old_locus_tag=AC57_4278 NZ_JJLR01000143.1 Protein Homology CDS 29091 29987 . + 0 ID=cds-WP_000621656.1;Parent=gene-AC57_RS04005;Dbxref=GenBank:WP_000621656.1;Name=WP_000621656.1;gbkey=CDS;gene=yihV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418319.2;locus_tag=AC57_RS04005;product=sulfofructose kinase;protein_id=WP_000621656.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 30021 30806 . + . ID=gene-AC57_RS04000;Name=csqR;gbkey=Gene;gene=csqR;gene_biotype=protein_coding;locus_tag=AC57_RS04000;old_locus_tag=AC57_4279 NZ_JJLR01000143.1 Protein Homology CDS 30021 30806 . + 0 ID=cds-WP_000059678.1;Parent=gene-AC57_RS04000;Dbxref=GenBank:WP_000059678.1;Name=WP_000059678.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=csqR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418320.2;locus_tag=AC57_RS04000;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000059678.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 30905 31504 . + . ID=gene-AC57_RS03995;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AC57_RS03995;old_locus_tag=AC57_4280 NZ_JJLR01000143.1 Protein Homology CDS 30905 31504 . + 0 ID=cds-WP_001295269.1;Parent=gene-AC57_RS03995;Dbxref=GenBank:WP_001295269.1;Name=WP_001295269.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709685.2;locus_tag=AC57_RS03995;product=glucose-1-phosphatase;protein_id=WP_001295269.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 31498 32370 . + . ID=gene-AC57_RS03990;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AC57_RS03990;old_locus_tag=AC57_4281 NZ_JJLR01000143.1 Protein Homology CDS 31498 32370 . + 0 ID=cds-WP_000920762.1;Parent=gene-AC57_RS03990;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AC57_RS03990;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 32367 32804 . + . ID=gene-AC57_RS03985;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AC57_RS03985;old_locus_tag=AC57_4282 NZ_JJLR01000143.1 Protein Homology CDS 32367 32804 . + 0 ID=cds-WP_000560983.1;Parent=gene-AC57_RS03985;Dbxref=GenBank:WP_000560983.1;Name=WP_000560983.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AC57_RS03985;product=D-aminoacyl-tRNA deacylase;protein_id=WP_000560983.1;transl_table=11 NZ_JJLR01000143.1 RefSeq gene 32849 33790 . + . ID=gene-AC57_RS03980;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AC57_RS03980;old_locus_tag=AC57_4283 NZ_JJLR01000143.1 Protein Homology CDS 32849 33790 . + 0 ID=cds-WP_001297068.1;Parent=gene-AC57_RS03980;Dbxref=GenBank:WP_001297068.1;Name=WP_001297068.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AC57_RS03980;product=fatty acid biosynthesis protein FabY;protein_id=WP_001297068.1;transl_table=11 NZ_JJLR01000143.1 RefSeq pseudogene 33952 34251 . + . ID=gene-AC57_RS0125400;Name=AC57_RS0125400;end_range=34251,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125400;partial=true;pseudo=true NZ_JJLR01000143.1 Protein Homology CDS 33952 34251 . + 0 ID=cds-AC57_RS0125400;Parent=gene-AC57_RS0125400;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=34251,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0125400;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000144.1 1 119176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000144.1 RefSeq region 1 119176 . + . ID=NZ_JJLR01000144.1:1..119176;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000144.1 RefSeq gene 1 265 . + . ID=gene-AC57_RS03975;Name=AC57_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03975;old_locus_tag=AC57_4285;partial=true;start_range=.,1 NZ_JJLR01000144.1 Protein Homology CDS 1 265 . + 1 ID=cds-WP_000962175.1;Parent=gene-AC57_RS03975;Dbxref=GenBank:WP_000962175.1;Name=WP_000962175.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS03975;partial=true;product=IS1 family transposase;protein_id=WP_000962175.1;start_range=.,1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 410 652 . + . ID=gene-AC57_RS03970;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AC57_RS03970;old_locus_tag=AC57_4286 NZ_JJLR01000144.1 Protein Homology CDS 410 652 . + 0 ID=cds-WP_001086388.1;Parent=gene-AC57_RS03970;Dbxref=GenBank:WP_001086388.1;Name=WP_001086388.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709694.2;locus_tag=AC57_RS03970;product=protein YiiF;protein_id=WP_001086388.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 982 1911 . - . ID=gene-AC57_RS03965;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AC57_RS03965;old_locus_tag=AC57_4287 NZ_JJLR01000144.1 Protein Homology CDS 982 1911 . - 0 ID=cds-WP_000027703.1;Parent=gene-AC57_RS03965;Dbxref=GenBank:WP_000027703.1;Name=WP_000027703.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AC57_RS03965;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027703.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 1908 2543 . - . ID=gene-AC57_RS03960;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AC57_RS03960;old_locus_tag=AC57_4288 NZ_JJLR01000144.1 Protein Homology CDS 1908 2543 . - 0 ID=cds-WP_000829013.1;Parent=gene-AC57_RS03960;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AC57_RS03960;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 2540 3442 . - . ID=gene-AC57_RS03955;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AC57_RS03955;old_locus_tag=AC57_4289 NZ_JJLR01000144.1 Protein Homology CDS 2540 3442 . - 0 ID=cds-WP_000331377.1;Parent=gene-AC57_RS03955;Dbxref=GenBank:WP_000331377.1;Name=WP_000331377.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AC57_RS03955;product=formate dehydrogenase O subunit beta;protein_id=WP_000331377.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 3455 6505 . - . ID=gene-AC57_RS03950;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AC57_RS03950;old_locus_tag=AC57_4290 NZ_JJLR01000144.1 Protein Homology CDS 3455 6505 . - 0 ID=cds-WP_010723259.1;Parent=gene-AC57_RS03950;Dbxref=GenBank:WP_010723259.1;Name=WP_010723259.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AC57_RS03950;product=formate dehydrogenase-N subunit alpha;protein_id=WP_010723259.1;transl_except=(pos:complement(5918..5920)%2Caa:Sec);transl_table=11 NZ_JJLR01000144.1 RefSeq gene 6699 7532 . + . ID=gene-AC57_RS03940;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AC57_RS03940;old_locus_tag=AC57_4293 NZ_JJLR01000144.1 Protein Homology CDS 6699 7532 . + 0 ID=cds-WP_000753614.1;Parent=gene-AC57_RS03940;Dbxref=GenBank:WP_000753614.1;Name=WP_000753614.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418331.1;locus_tag=AC57_RS03940;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753614.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 7685 8725 . + . ID=gene-AC57_RS03935;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=AC57_RS03935;old_locus_tag=AC57_4294 NZ_JJLR01000144.1 Protein Homology CDS 7685 8725 . + 0 ID=cds-WP_032279461.1;Parent=gene-AC57_RS03935;Dbxref=GenBank:WP_032279461.1;Name=WP_032279461.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418332.1;locus_tag=AC57_RS03935;product=YiiG family protein;protein_id=WP_032279461.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 8775 10523 . - . ID=gene-AC57_RS03930;Name=frvR;gbkey=Gene;gene=frvR;gene_biotype=protein_coding;locus_tag=AC57_RS03930;old_locus_tag=AC57_4295 NZ_JJLR01000144.1 Protein Homology CDS 8775 10523 . - 0 ID=cds-WP_000931299.1;Parent=gene-AC57_RS03930;Dbxref=GenBank:WP_000931299.1;Name=WP_000931299.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=frvR;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418333.1;locus_tag=AC57_RS03930;product=putative frv operon regulatory protein;protein_id=WP_000931299.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 10523 11593 . - . ID=gene-AC57_RS03925;Name=frvX;gbkey=Gene;gene=frvX;gene_biotype=protein_coding;locus_tag=AC57_RS03925;old_locus_tag=AC57_4296 NZ_JJLR01000144.1 Protein Homology CDS 10523 11593 . - 0 ID=cds-WP_032237099.1;Parent=gene-AC57_RS03925;Dbxref=GenBank:WP_032237099.1;Name=WP_032237099.1;gbkey=CDS;gene=frvX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418334.1;locus_tag=AC57_RS03925;product=aminopeptidase;protein_id=WP_032237099.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 11583 13034 . - . ID=gene-AC57_RS03920;Name=frvB;gbkey=Gene;gene=frvB;gene_biotype=protein_coding;locus_tag=AC57_RS03920;old_locus_tag=AC57_4297 NZ_JJLR01000144.1 Protein Homology CDS 11583 13034 . - 0 ID=cds-WP_000446023.1;Parent=gene-AC57_RS03920;Dbxref=GenBank:WP_000446023.1;Name=WP_000446023.1;gbkey=CDS;gene=frvB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418335.4;locus_tag=AC57_RS03920;product=PTS fructose-like transporter subunit IIBC;protein_id=WP_000446023.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 13045 13491 . - . ID=gene-AC57_RS03915;Name=frvA;gbkey=Gene;gene=frvA;gene_biotype=protein_coding;locus_tag=AC57_RS03915;old_locus_tag=AC57_4298 NZ_JJLR01000144.1 Protein Homology CDS 13045 13491 . - 0 ID=cds-WP_000729595.1;Parent=gene-AC57_RS03915;Dbxref=GenBank:WP_000729595.1;Name=WP_000729595.1;gbkey=CDS;gene=frvA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418336.1;locus_tag=AC57_RS03915;product=PTS fructose transporter subunit IIA;protein_id=WP_000729595.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 13968 15362 . + . ID=gene-AC57_RS03910;Name=AC57_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03910;old_locus_tag=AC57_4299 NZ_JJLR01000144.1 Protein Homology CDS 13968 15362 . + 0 ID=cds-WP_001569309.1;Parent=gene-AC57_RS03910;Dbxref=GenBank:WP_001569309.1;Name=WP_001569309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312854.1;locus_tag=AC57_RS03910;product=carbohydrate porin;protein_id=WP_001569309.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 15403 15717 . - . ID=gene-AC57_RS03905;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AC57_RS03905;old_locus_tag=AC57_4300 NZ_JJLR01000144.1 Protein Homology CDS 15403 15717 . - 0 ID=cds-WP_000619493.1;Parent=gene-AC57_RS03905;Dbxref=GenBank:WP_000619493.1;Name=WP_000619493.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418337.1;locus_tag=AC57_RS03905;product=L-rhamnose mutarotase;protein_id=WP_000619493.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 15727 16551 . - . ID=gene-AC57_RS03900;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AC57_RS03900;old_locus_tag=AC57_4301 NZ_JJLR01000144.1 Protein Homology CDS 15727 16551 . - 0 ID=cds-WP_001179745.1;Parent=gene-AC57_RS03900;Dbxref=GenBank:WP_001179745.1;Name=WP_001179745.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418338.1;locus_tag=AC57_RS03900;product=rhamnulose-1-phosphate aldolase;protein_id=WP_001179745.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 16634 17893 . - . ID=gene-AC57_RS03895;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AC57_RS03895;old_locus_tag=AC57_4302 NZ_JJLR01000144.1 Protein Homology CDS 16634 17893 . - 0 ID=cds-WP_001311268.1;Parent=gene-AC57_RS03895;Dbxref=GenBank:WP_001311268.1;Name=WP_001311268.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=AC57_RS03895;product=L-rhamnose isomerase;protein_id=WP_001311268.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 17890 19359 . - . ID=gene-AC57_RS03890;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AC57_RS03890;old_locus_tag=AC57_4303 NZ_JJLR01000144.1 Protein Homology CDS 17890 19359 . - 0 ID=cds-WP_000144072.1;Parent=gene-AC57_RS03890;Dbxref=GenBank:WP_000144072.1;Name=WP_000144072.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312858.1;locus_tag=AC57_RS03890;product=rhamnulokinase;protein_id=WP_000144072.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 19647 20483 . + . ID=gene-AC57_RS03880;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AC57_RS03880;old_locus_tag=AC57_4305 NZ_JJLR01000144.1 Protein Homology CDS 19647 20483 . + 0 ID=cds-WP_000217139.1;Parent=gene-AC57_RS03880;Dbxref=GenBank:WP_000217139.1;Name=WP_000217139.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418341.1;locus_tag=AC57_RS03880;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217139.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 20557 21405 . + . ID=gene-AC57_RS03875;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AC57_RS03875;old_locus_tag=AC57_4306 NZ_JJLR01000144.1 Protein Homology CDS 20557 21405 . + 0 ID=cds-WP_032279463.1;Parent=gene-AC57_RS03875;Dbxref=GenBank:WP_032279463.1;Name=WP_032279463.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AC57_RS03875;product=HTH-type transcriptional activator RhaR;protein_id=WP_032279463.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 21402 22436 . - . ID=gene-AC57_RS03870;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AC57_RS03870;old_locus_tag=AC57_4307 NZ_JJLR01000144.1 Protein Homology CDS 21402 22436 . - 0 ID=cds-WP_000063507.1;Parent=gene-AC57_RS03870;Dbxref=GenBank:WP_000063507.1;Name=WP_000063507.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AC57_RS03870;product=L-rhamnose/proton symporter RhaT;protein_id=WP_000063507.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 22721 23341 . + . ID=gene-AC57_RS03865;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AC57_RS03865;old_locus_tag=AC57_4308 NZ_JJLR01000144.1 Protein Homology CDS 22721 23341 . + 0 ID=cds-WP_001297064.1;Parent=gene-AC57_RS03865;Dbxref=GenBank:WP_001297064.1;Name=WP_001297064.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AC57_RS03865;product=superoxide dismutase [Mn];protein_id=WP_001297064.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 23601 24584 . + . ID=gene-AC57_RS03855;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AC57_RS03855;old_locus_tag=AC57_4310 NZ_JJLR01000144.1 Protein Homology CDS 23601 24584 . + 0 ID=cds-WP_032285750.1;Parent=gene-AC57_RS03855;Dbxref=GenBank:WP_032285750.1;Name=WP_032285750.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AC57_RS03855;product=2-keto-3-deoxygluconate transporter;protein_id=WP_032285750.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 24733 25407 . + . ID=gene-AC57_RS03850;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AC57_RS03850;old_locus_tag=AC57_4311 NZ_JJLR01000144.1 Protein Homology CDS 24733 25407 . + 0 ID=cds-WP_001270260.1;Parent=gene-AC57_RS03850;Dbxref=GenBank:WP_001270260.1;Name=WP_001270260.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AC57_RS03850;product=6-hydroxyaminopurine reductase;protein_id=WP_001270260.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 25513 26886 . - . ID=gene-AC57_RS03845;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AC57_RS03845;old_locus_tag=AC57_4312 NZ_JJLR01000144.1 Protein Homology CDS 25513 26886 . - 0 ID=cds-WP_000580417.1;Parent=gene-AC57_RS03845;Dbxref=GenBank:WP_000580417.1;Name=WP_000580417.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AC57_RS03845;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580417.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 26883 27581 . - . ID=gene-AC57_RS03840;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AC57_RS03840;old_locus_tag=AC57_4313 NZ_JJLR01000144.1 Protein Homology CDS 26883 27581 . - 0 ID=cds-WP_001033722.1;Parent=gene-AC57_RS03840;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AC57_RS03840;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 27731 28231 . + . ID=gene-AC57_RS03835;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AC57_RS03835;old_locus_tag=AC57_4314 NZ_JJLR01000144.1 Protein Homology CDS 27731 28231 . + 0 ID=cds-WP_001223800.1;Parent=gene-AC57_RS03835;Dbxref=GenBank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AC57_RS03835;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 28421 28756 . - . ID=gene-AC57_RS03830;Name=AC57_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03830;old_locus_tag=AC57_4315 NZ_JJLR01000144.1 GeneMarkS-2+ CDS 28421 28756 . - 0 ID=cds-WP_032267783.1;Parent=gene-AC57_RS03830;Dbxref=GenBank:WP_032267783.1;Name=WP_032267783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS03830;product=hypothetical protein;protein_id=WP_032267783.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 28740 28976 . + . ID=gene-AC57_RS03825;Name=AC57_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03825;old_locus_tag=AC57_4316 NZ_JJLR01000144.1 Protein Homology CDS 28740 28976 . + 0 ID=cds-WP_032237103.1;Parent=gene-AC57_RS03825;Dbxref=GenBank:WP_032237103.1;Name=WP_032237103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243377.1;locus_tag=AC57_RS03825;product=hypothetical protein;protein_id=WP_032237103.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 28980 29960 . - . ID=gene-AC57_RS03820;Name=AC57_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03820;old_locus_tag=AC57_4317 NZ_JJLR01000144.1 Protein Homology CDS 28980 29960 . - 0 ID=cds-WP_032237104.1;Parent=gene-AC57_RS03820;Dbxref=GenBank:WP_032237104.1;Name=WP_032237104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985242.1;locus_tag=AC57_RS03820;product=phage integrase;protein_id=WP_032237104.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 30030 30323 . - . ID=gene-AC57_RS0125415;Name=AC57_RS0125415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125415 NZ_JJLR01000144.1 Protein Homology CDS 30030 30323 . - 0 ID=cds-WP_032237105.1;Parent=gene-AC57_RS0125415;Dbxref=GenBank:WP_032237105.1;Name=WP_032237105.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249394.1;locus_tag=AC57_RS0125415;product=helix-turn-helix domain-containing protein;protein_id=WP_032237105.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 30477 30749 . + . ID=gene-AC57_RS03815;Name=AC57_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03815;old_locus_tag=AC57_4318 NZ_JJLR01000144.1 Protein Homology CDS 30477 30749 . + 0 ID=cds-WP_016243380.1;Parent=gene-AC57_RS03815;Dbxref=GenBank:WP_016243380.1;Name=WP_016243380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583792.1;locus_tag=AC57_RS03815;product=Cox family DNA-binding protein;protein_id=WP_016243380.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 30919 31419 . + . ID=gene-AC57_RS03810;Name=AC57_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03810;old_locus_tag=AC57_4319 NZ_JJLR01000144.1 Protein Homology CDS 30919 31419 . + 0 ID=cds-WP_001670778.1;Parent=gene-AC57_RS03810;Dbxref=GenBank:WP_001670778.1;Name=WP_001670778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441883.1;locus_tag=AC57_RS03810;product=hypothetical protein;protein_id=WP_001670778.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 31483 31707 . + . ID=gene-AC57_RS03805;Name=AC57_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03805;old_locus_tag=AC57_4320 NZ_JJLR01000144.1 Protein Homology CDS 31483 31707 . + 0 ID=cds-WP_032237106.1;Parent=gene-AC57_RS03805;Dbxref=GenBank:WP_032237106.1;Name=WP_032237106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236090.1;locus_tag=AC57_RS03805;product=DUF2732 family protein;protein_id=WP_032237106.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 31707 32003 . + . ID=gene-AC57_RS03800;Name=AC57_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03800;old_locus_tag=AC57_4321 NZ_JJLR01000144.1 Protein Homology CDS 31707 32003 . + 0 ID=cds-WP_032237107.1;Parent=gene-AC57_RS03800;Dbxref=GenBank:WP_032237107.1;Name=WP_032237107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462549.1;locus_tag=AC57_RS03800;product=DUF5405 family protein;protein_id=WP_032237107.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 32008 32232 . + . ID=gene-AC57_RS0125420;Name=AC57_RS0125420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125420 NZ_JJLR01000144.1 Protein Homology CDS 32008 32232 . + 0 ID=cds-WP_032237108.1;Parent=gene-AC57_RS0125420;Dbxref=GenBank:WP_032237108.1;Name=WP_032237108.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242005.1;locus_tag=AC57_RS0125420;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_032237108.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 32229 32504 . + . ID=gene-AC57_RS03795;Name=AC57_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03795;old_locus_tag=AC57_4322 NZ_JJLR01000144.1 Protein Homology CDS 32229 32504 . + 0 ID=cds-WP_032279457.1;Parent=gene-AC57_RS03795;Dbxref=GenBank:WP_032279457.1;Name=WP_032279457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027668.1;locus_tag=AC57_RS03795;product=DUF5405 family protein;protein_id=WP_032279457.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 32494 34782 . + . ID=gene-AC57_RS03790;Name=AC57_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03790;old_locus_tag=AC57_4323 NZ_JJLR01000144.1 Protein Homology CDS 32494 34782 . + 0 ID=cds-WP_032237110.1;Parent=gene-AC57_RS03790;Dbxref=GenBank:WP_032237110.1;Name=WP_032237110.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505028.1;locus_tag=AC57_RS03790;product=replication endonuclease;protein_id=WP_032237110.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 34788 34964 . + . ID=gene-AC57_RS30360;Name=AC57_RS30360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30360 NZ_JJLR01000144.1 Protein Homology CDS 34788 34964 . + 0 ID=cds-WP_032237148.1;Parent=gene-AC57_RS30360;Dbxref=GenBank:WP_032237148.1;Name=WP_032237148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000753063.1;locus_tag=AC57_RS30360;product=hypothetical protein;protein_id=WP_032237148.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 34964 35200 . + . ID=gene-AC57_RS30875;Name=AC57_RS30875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30875;old_locus_tag=AC57_4324 NZ_JJLR01000144.1 Protein Homology CDS 34964 35200 . + 0 ID=cds-WP_032237111.1;Parent=gene-AC57_RS30875;Dbxref=GenBank:WP_032237111.1;Name=WP_032237111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001394634.1;locus_tag=AC57_RS30875;product=hypothetical protein;protein_id=WP_032237111.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 35679 36701 . - . ID=gene-AC57_RS03780;Name=AC57_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03780;old_locus_tag=AC57_4326 NZ_JJLR01000144.1 Protein Homology CDS 35679 36701 . - 0 ID=cds-WP_032237113.1;Parent=gene-AC57_RS03780;Dbxref=GenBank:WP_032237113.1;Name=WP_032237113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530896.1;locus_tag=AC57_RS03780;product=phage portal protein;protein_id=WP_032237113.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 36698 37444 . - . ID=gene-AC57_RS03775;Name=AC57_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03775;old_locus_tag=AC57_4327 NZ_JJLR01000144.1 Protein Homology CDS 36698 37444 . - 0 ID=cds-WP_032237114.1;Parent=gene-AC57_RS03775;Dbxref=GenBank:WP_032237114.1;Name=WP_032237114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534851.1;locus_tag=AC57_RS03775;product=terminase large subunit domain-containing protein;protein_id=WP_032237114.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 37444 39213 . - . ID=gene-AC57_RS03770;Name=AC57_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03770;old_locus_tag=AC57_4328 NZ_JJLR01000144.1 Protein Homology CDS 37444 39213 . - 0 ID=cds-WP_032279456.1;Parent=gene-AC57_RS03770;Dbxref=GenBank:WP_032279456.1;Name=WP_032279456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228317.1;locus_tag=AC57_RS03770;product=terminase ATPase subunit family protein;protein_id=WP_032279456.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 39379 40233 . + . ID=gene-AC57_RS03765;Name=AC57_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03765;old_locus_tag=AC57_4329 NZ_JJLR01000144.1 Protein Homology CDS 39379 40233 . + 0 ID=cds-WP_032237115.1;Parent=gene-AC57_RS03765;Dbxref=GenBank:WP_032237115.1;Name=WP_032237115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228318.1;locus_tag=AC57_RS03765;product=GPO family capsid scaffolding protein;protein_id=WP_032237115.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 40309 41376 . + . ID=gene-AC57_RS03760;Name=AC57_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03760;old_locus_tag=AC57_4330 NZ_JJLR01000144.1 Protein Homology CDS 40309 41376 . + 0 ID=cds-WP_032237117.1;Parent=gene-AC57_RS03760;Dbxref=GenBank:WP_032237117.1;Name=WP_032237117.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742976.1;locus_tag=AC57_RS03760;product=phage major capsid protein%2C P2 family;protein_id=WP_032237117.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 41381 42130 . + . ID=gene-AC57_RS03755;Name=AC57_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03755;old_locus_tag=AC57_4331 NZ_JJLR01000144.1 Protein Homology CDS 41381 42130 . + 0 ID=cds-WP_032237118.1;Parent=gene-AC57_RS03755;Dbxref=GenBank:WP_032237118.1;Name=WP_032237118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526222.1;locus_tag=AC57_RS03755;product=terminase endonuclease subunit;protein_id=WP_032237118.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 42224 42733 . + . ID=gene-AC57_RS03750;Name=AC57_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03750;old_locus_tag=AC57_4332 NZ_JJLR01000144.1 Protein Homology CDS 42224 42733 . + 0 ID=cds-WP_000214251.1;Parent=gene-AC57_RS03750;Dbxref=GenBank:WP_000214251.1;Name=WP_000214251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214251.1;locus_tag=AC57_RS03750;product=head completion/stabilization protein;protein_id=WP_000214251.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 42733 42936 . + . ID=gene-AC57_RS03745;Name=AC57_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03745;old_locus_tag=AC57_4333 NZ_JJLR01000144.1 Protein Homology CDS 42733 42936 . + 0 ID=cds-WP_032237120.1;Parent=gene-AC57_RS03745;Dbxref=GenBank:WP_032237120.1;Name=WP_032237120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973898.1;locus_tag=AC57_RS03745;product=tail protein X;protein_id=WP_032237120.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 42927 43148 . + . ID=gene-AC57_RS03740;Name=AC57_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03740;old_locus_tag=AC57_4334 NZ_JJLR01000144.1 Protein Homology CDS 42927 43148 . + 0 ID=cds-WP_001437784.1;Parent=gene-AC57_RS03740;Dbxref=GenBank:WP_001437784.1;Name=WP_001437784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001437784.1;locus_tag=AC57_RS03740;product=HP1 family phage holin;protein_id=WP_001437784.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 43132 43641 . + . ID=gene-AC57_RS03735;Name=AC57_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03735;old_locus_tag=AC57_4335 NZ_JJLR01000144.1 Protein Homology CDS 43132 43641 . + 0 ID=cds-WP_032237122.1;Parent=gene-AC57_RS03735;Dbxref=GenBank:WP_032237122.1;Name=WP_032237122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884140.1;locus_tag=AC57_RS03735;product=lysozyme;protein_id=WP_032237122.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 43638 44051 . + . ID=gene-AC57_RS30885;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=AC57_RS30885;old_locus_tag=AC57_4336 NZ_JJLR01000144.1 Protein Homology CDS 43638 44051 . + 0 ID=cds-WP_032237124.1;Parent=gene-AC57_RS30885;Dbxref=GenBank:WP_032237124.1;Name=WP_032237124.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550198.1;locus_tag=AC57_RS30885;product=Rz-like lysis system protein LysB;protein_id=WP_032237124.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 43951 44196 . + . ID=gene-AC57_RS30585;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC57_RS30585;old_locus_tag=AC57_4337 NZ_JJLR01000144.1 Protein Homology CDS 43951 44196 . + 0 ID=cds-WP_231586507.1;Parent=gene-AC57_RS30585;Dbxref=GenBank:WP_231586507.1;Name=WP_231586507.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703019.1;locus_tag=AC57_RS30585;product=Rz1-like lysis system protein LysC;protein_id=WP_231586507.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 44159 44626 . + . ID=gene-AC57_RS03720;Name=AC57_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03720;old_locus_tag=AC57_4338 NZ_JJLR01000144.1 Protein Homology CDS 44159 44626 . + 0 ID=cds-WP_032237125.1;Parent=gene-AC57_RS03720;Dbxref=GenBank:WP_032237125.1;Name=WP_032237125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001416708.1;locus_tag=AC57_RS03720;product=phage tail protein;protein_id=WP_032237125.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 44619 45068 . + . ID=gene-AC57_RS03715;Name=AC57_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03715;old_locus_tag=AC57_4339 NZ_JJLR01000144.1 Protein Homology CDS 44619 45068 . + 0 ID=cds-WP_032237126.1;Parent=gene-AC57_RS03715;Dbxref=GenBank:WP_032237126.1;Name=WP_032237126.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406368.1;locus_tag=AC57_RS03715;product=phage virion morphogenesis protein;protein_id=WP_032237126.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 45137 45778 . + . ID=gene-AC57_RS03710;Name=AC57_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03710;old_locus_tag=AC57_4340 NZ_JJLR01000144.1 Protein Homology CDS 45137 45778 . + 0 ID=cds-WP_032237127.1;Parent=gene-AC57_RS03710;Dbxref=GenBank:WP_032237127.1;Name=WP_032237127.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505039.1;locus_tag=AC57_RS03710;product=phage baseplate assembly protein V;protein_id=WP_032237127.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 45775 46122 . + . ID=gene-AC57_RS03705;Name=AC57_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03705;old_locus_tag=AC57_4341 NZ_JJLR01000144.1 Protein Homology CDS 45775 46122 . + 0 ID=cds-WP_032237128.1;Parent=gene-AC57_RS03705;Dbxref=GenBank:WP_032237128.1;Name=WP_032237128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001550203.1;locus_tag=AC57_RS03705;product=GPW/gp25 family protein;protein_id=WP_032237128.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 46129 47037 . + . ID=gene-AC57_RS03700;Name=AC57_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03700;old_locus_tag=AC57_4342 NZ_JJLR01000144.1 Protein Homology CDS 46129 47037 . + 0 ID=cds-WP_032267782.1;Parent=gene-AC57_RS03700;Dbxref=GenBank:WP_032267782.1;Name=WP_032267782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121472.1;locus_tag=AC57_RS03700;product=baseplate assembly protein;protein_id=WP_032267782.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 47030 47638 . + . ID=gene-AC57_RS03695;Name=AC57_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03695;old_locus_tag=AC57_4343 NZ_JJLR01000144.1 Protein Homology CDS 47030 47638 . + 0 ID=cds-WP_032237130.1;Parent=gene-AC57_RS03695;Dbxref=GenBank:WP_032237130.1;Name=WP_032237130.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370166.1;locus_tag=AC57_RS03695;product=phage tail protein I;protein_id=WP_032237130.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 47635 48945 . + . ID=gene-AC57_RS30890;Name=AC57_RS30890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30890;old_locus_tag=AC57_4344 NZ_JJLR01000144.1 Protein Homology CDS 47635 48945 . + 0 ID=cds-WP_077756466.1;Parent=gene-AC57_RS30890;Dbxref=GenBank:WP_077756466.1;Name=WP_077756466.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104746.1;locus_tag=AC57_RS30890;product=phage tail protein;protein_id=WP_077756466.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 48950 49117 . + . ID=gene-AC57_RS30365;Name=AC57_RS30365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30365 NZ_JJLR01000144.1 Protein Homology CDS 48950 49117 . + 0 ID=cds-WP_187439611.1;Parent=gene-AC57_RS30365;Dbxref=GenBank:WP_187439611.1;Name=WP_187439611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001736677.1;locus_tag=AC57_RS30365;product=hypothetical protein;protein_id=WP_187439611.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 49238 49417 . - . ID=gene-AC57_RS03690;Name=AC57_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03690;old_locus_tag=AC57_4345 NZ_JJLR01000144.1 GeneMarkS-2+ CDS 49238 49417 . - 0 ID=cds-WP_032237131.1;Parent=gene-AC57_RS03690;Dbxref=GenBank:WP_032237131.1;Name=WP_032237131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS03690;product=hypothetical protein;protein_id=WP_032237131.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 49422 50636 . - . ID=gene-AC57_RS03685;Name=AC57_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03685;old_locus_tag=AC57_4346 NZ_JJLR01000144.1 GeneMarkS-2+ CDS 49422 50636 . - 0 ID=cds-WP_032237132.1;Parent=gene-AC57_RS03685;Dbxref=GenBank:WP_032237132.1;Name=WP_032237132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS03685;product=hypothetical protein;protein_id=WP_032237132.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 51013 52191 . + . ID=gene-AC57_RS03680;Name=AC57_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03680;old_locus_tag=AC57_4347 NZ_JJLR01000144.1 Protein Homology CDS 51013 52191 . + 0 ID=cds-WP_032237133.1;Parent=gene-AC57_RS03680;Dbxref=GenBank:WP_032237133.1;Name=WP_032237133.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505045.1;locus_tag=AC57_RS03680;product=phage tail sheath protein;protein_id=WP_032237133.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 52207 52725 . + . ID=gene-AC57_RS03675;Name=AC57_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03675;old_locus_tag=AC57_4348 NZ_JJLR01000144.1 Protein Homology CDS 52207 52725 . + 0 ID=cds-WP_001207674.1;Parent=gene-AC57_RS03675;Dbxref=GenBank:WP_001207674.1;Name=WP_001207674.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817465.1;locus_tag=AC57_RS03675;product=phage major tail tube protein;protein_id=WP_001207674.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 52789 53124 . + . ID=gene-AC57_RS03670;Name=AC57_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03670;old_locus_tag=AC57_4349 NZ_JJLR01000144.1 Protein Homology CDS 52789 53124 . + 0 ID=cds-WP_032237134.1;Parent=gene-AC57_RS03670;Dbxref=GenBank:WP_032237134.1;Name=WP_032237134.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406359.1;locus_tag=AC57_RS03670;product=phage tail assembly protein;protein_id=WP_032237134.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 53157 53276 . + . ID=gene-AC57_RS03665;Name=AC57_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03665;old_locus_tag=AC57_4350 NZ_JJLR01000144.1 Protein Homology CDS 53157 53276 . + 0 ID=cds-WP_000763323.1;Parent=gene-AC57_RS03665;Dbxref=GenBank:WP_000763323.1;Name=WP_000763323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959005.1;locus_tag=AC57_RS03665;product=GpE family phage tail protein;protein_id=WP_000763323.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 53269 55710 . + . ID=gene-AC57_RS03660;Name=AC57_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03660;old_locus_tag=AC57_4351 NZ_JJLR01000144.1 Protein Homology CDS 53269 55710 . + 0 ID=cds-WP_032237135.1;Parent=gene-AC57_RS03660;Dbxref=GenBank:WP_032237135.1;Name=WP_032237135.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000069526.1;locus_tag=AC57_RS03660;product=phage tail tape measure protein;protein_id=WP_032237135.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 55722 56207 . + . ID=gene-AC57_RS03655;Name=AC57_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03655;old_locus_tag=AC57_4352 NZ_JJLR01000144.1 Protein Homology CDS 55722 56207 . + 0 ID=cds-WP_000978868.1;Parent=gene-AC57_RS03655;Dbxref=GenBank:WP_000978868.1;Name=WP_000978868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978867.1;locus_tag=AC57_RS03655;product=phage tail protein;protein_id=WP_000978868.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 56204 57373 . + . ID=gene-AC57_RS03650;Name=AC57_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03650;old_locus_tag=AC57_4353 NZ_JJLR01000144.1 Protein Homology CDS 56204 57373 . + 0 ID=cds-WP_050440092.1;Parent=gene-AC57_RS03650;Dbxref=GenBank:WP_050440092.1;Name=WP_050440092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627818.1;locus_tag=AC57_RS03650;product=phage late control D family protein;protein_id=WP_050440092.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 57451 57669 . + . ID=gene-AC57_RS28060;Name=ogrK;gbkey=Gene;gene=ogrK;gene_biotype=protein_coding;locus_tag=AC57_RS28060;old_locus_tag=AC57_4354 NZ_JJLR01000144.1 Protein Homology CDS 57451 57669 . + 0 ID=cds-WP_000468311.1;Parent=gene-AC57_RS28060;Dbxref=GenBank:WP_000468311.1;Name=WP_000468311.1;gbkey=CDS;gene=ogrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416586.1;locus_tag=AC57_RS28060;product=DNA-binding transcriptional regulator;protein_id=WP_000468311.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 57704 58120 . - . ID=gene-AC57_RS03640;Name=AC57_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03640;old_locus_tag=AC57_4355 NZ_JJLR01000144.1 Protein Homology CDS 57704 58120 . - 0 ID=cds-WP_032237136.1;Parent=gene-AC57_RS03640;Dbxref=GenBank:WP_032237136.1;Name=WP_032237136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000933379.1;locus_tag=AC57_RS03640;product=hypothetical protein;protein_id=WP_032237136.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 58405 59307 . + . ID=gene-AC57_RS03635;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AC57_RS03635;old_locus_tag=AC57_4356 NZ_JJLR01000144.1 Protein Homology CDS 58405 59307 . + 0 ID=cds-WP_001076742.1;Parent=gene-AC57_RS03635;Dbxref=GenBank:WP_001076742.1;Name=WP_001076742.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312867.1;locus_tag=AC57_RS03635;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076742.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 59488 60450 . + . ID=gene-AC57_RS03630;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AC57_RS03630;old_locus_tag=AC57_4357 NZ_JJLR01000144.1 Protein Homology CDS 59488 60450 . + 0 ID=cds-WP_000591795.1;Parent=gene-AC57_RS03630;Dbxref=GenBank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AC57_RS03630;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 60770 61759 . + . ID=gene-AC57_RS03625;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AC57_RS03625;old_locus_tag=AC57_4358 NZ_JJLR01000144.1 Protein Homology CDS 60770 61759 . + 0 ID=cds-WP_001045689.1;Parent=gene-AC57_RS03625;Dbxref=GenBank:WP_001045689.1;Name=WP_001045689.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AC57_RS03625;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045689.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 61866 62621 . + . ID=gene-AC57_RS03620;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AC57_RS03620;old_locus_tag=AC57_4359 NZ_JJLR01000144.1 Protein Homology CDS 61866 62621 . + 0 ID=cds-WP_000708998.1;Parent=gene-AC57_RS03620;Dbxref=GenBank:WP_000708998.1;Name=WP_000708998.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312870.1;locus_tag=AC57_RS03620;product=CDP-diacylglycerol diphosphatase;protein_id=WP_000708998.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 62676 63443 . - . ID=gene-AC57_RS03615;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AC57_RS03615;old_locus_tag=AC57_4360 NZ_JJLR01000144.1 Protein Homology CDS 62676 63443 . - 0 ID=cds-WP_001216325.1;Parent=gene-AC57_RS03615;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AC57_RS03615;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 63551 64150 . - . ID=gene-AC57_RS03610;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AC57_RS03610;old_locus_tag=AC57_4361 NZ_JJLR01000144.1 Protein Homology CDS 63551 64150 . - 0 ID=cds-WP_000802226.1;Parent=gene-AC57_RS03610;Dbxref=GenBank:WP_000802226.1;Name=WP_000802226.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AC57_RS03610;product=YiiQ family protein;protein_id=WP_000802226.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 64251 64691 . + . ID=gene-AC57_RS03605;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AC57_RS03605;old_locus_tag=AC57_4362 NZ_JJLR01000144.1 Protein Homology CDS 64251 64691 . + 0 ID=cds-WP_000155273.1;Parent=gene-AC57_RS03605;Dbxref=GenBank:WP_000155273.1;Name=WP_000155273.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AC57_RS03605;product=DUF805 domain-containing protein;protein_id=WP_000155273.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 64903 65202 . + . ID=gene-AC57_RS03600;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AC57_RS03600;old_locus_tag=AC57_4363 NZ_JJLR01000144.1 Protein Homology CDS 64903 65202 . + 0 ID=cds-WP_000655986.1;Parent=gene-AC57_RS03600;Dbxref=GenBank:WP_000655986.1;Name=WP_000655986.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312874.1;locus_tag=AC57_RS03600;product=DUF406 domain-containing protein;protein_id=WP_000655986.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 65229 65657 . + . ID=gene-AC57_RS03595;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AC57_RS03595;old_locus_tag=AC57_4364 NZ_JJLR01000144.1 Protein Homology CDS 65229 65657 . + 0 ID=cds-WP_000323556.1;Parent=gene-AC57_RS03595;Dbxref=GenBank:WP_000323556.1;Name=WP_000323556.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418358.1;locus_tag=AC57_RS03595;product=universal stress protein UspD;protein_id=WP_000323556.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 65662 66408 . - . ID=gene-AC57_RS03590;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AC57_RS03590;old_locus_tag=AC57_4365 NZ_JJLR01000144.1 Protein Homology CDS 65662 66408 . - 0 ID=cds-WP_000796332.1;Parent=gene-AC57_RS03590;Dbxref=GenBank:WP_000796332.1;Name=WP_000796332.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418359.1;locus_tag=AC57_RS03590;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796332.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 66505 67515 . - . ID=gene-AC57_RS03585;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AC57_RS03585;old_locus_tag=AC57_4366 NZ_JJLR01000144.1 Protein Homology CDS 66505 67515 . - 0 ID=cds-WP_001250644.1;Parent=gene-AC57_RS03585;Dbxref=GenBank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AC57_RS03585;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 67650 69158 . - . ID=gene-AC57_RS03580;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AC57_RS03580;old_locus_tag=AC57_4367 NZ_JJLR01000144.1 Protein Homology CDS 67650 69158 . - 0 ID=cds-WP_000136788.1;Parent=gene-AC57_RS03580;Dbxref=GenBank:WP_000136788.1;Name=WP_000136788.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AC57_RS03580;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 69181 70026 . - . ID=gene-AC57_RS03575;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AC57_RS03575;old_locus_tag=AC57_4368 NZ_JJLR01000144.1 Protein Homology CDS 69181 70026 . - 0 ID=cds-WP_000084268.1;Parent=gene-AC57_RS03575;Dbxref=GenBank:WP_000084268.1;Name=WP_000084268.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AC57_RS03575;product=glycerol uptake facilitator protein GlpF;protein_id=WP_000084268.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 70451 70696 . + . ID=gene-AC57_RS03570;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AC57_RS03570;old_locus_tag=AC57_4369 NZ_JJLR01000144.1 Protein Homology CDS 70451 70696 . + 0 ID=cds-WP_001296623.1;Parent=gene-AC57_RS03570;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AC57_RS03570;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 70781 71266 . - . ID=gene-AC57_RS03565;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AC57_RS03565;old_locus_tag=AC57_4370 NZ_JJLR01000144.1 Protein Homology CDS 70781 71266 . - 0 ID=cds-WP_000872908.1;Parent=gene-AC57_RS03565;Dbxref=GenBank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AC57_RS03565;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 71359 72285 . - . ID=gene-AC57_RS03560;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AC57_RS03560;old_locus_tag=AC57_4371 NZ_JJLR01000144.1 Protein Homology CDS 71359 72285 . - 0 ID=cds-WP_032237137.1;Parent=gene-AC57_RS03560;Dbxref=GenBank:WP_032237137.1;Name=WP_032237137.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418365.1;locus_tag=AC57_RS03560;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_032237137.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 72352 73683 . - . ID=gene-AC57_RS03555;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AC57_RS03555;old_locus_tag=AC57_4372 NZ_JJLR01000144.1 Protein Homology CDS 72352 73683 . - 0 ID=cds-WP_001293341.1;Parent=gene-AC57_RS03555;Dbxref=GenBank:WP_001293341.1;Name=WP_001293341.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AC57_RS03555;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293341.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 73693 74223 . - . ID=gene-AC57_RS03550;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AC57_RS03550;old_locus_tag=AC57_4373 NZ_JJLR01000144.1 Protein Homology CDS 73693 74223 . - 0 ID=cds-WP_000208242.1;Parent=gene-AC57_RS03550;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AC57_RS03550;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 74316 75275 . - . ID=gene-AC57_RS03545;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AC57_RS03545;old_locus_tag=AC57_4374 NZ_JJLR01000144.1 Protein Homology CDS 74316 75275 . - 0 ID=cds-WP_071999897.1;Parent=gene-AC57_RS03545;Dbxref=GenBank:WP_071999897.1;Name=WP_071999897.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418368.1;locus_tag=AC57_RS03545;product=cell division protein FtsN;protein_id=WP_071999897.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 75367 76392 . - . ID=gene-AC57_RS03540;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AC57_RS03540;old_locus_tag=AC57_4375 NZ_JJLR01000144.1 Protein Homology CDS 75367 76392 . - 0 ID=cds-WP_000644904.1;Parent=gene-AC57_RS03540;Dbxref=GenBank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AC57_RS03540;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 76548 78746 . - . ID=gene-AC57_RS03535;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AC57_RS03535;old_locus_tag=AC57_4377 NZ_JJLR01000144.1 Protein Homology CDS 76548 78746 . - 0 ID=cds-WP_032246235.1;Parent=gene-AC57_RS03535;Dbxref=GenBank:WP_032246235.1;Name=WP_032246235.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AC57_RS03535;product=primosomal protein N';protein_id=WP_032246235.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 78949 79161 . + . ID=gene-AC57_RS03530;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AC57_RS03530;old_locus_tag=AC57_4378 NZ_JJLR01000144.1 Protein Homology CDS 78949 79161 . + 0 ID=cds-WP_000710769.1;Parent=gene-AC57_RS03530;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AC57_RS03530;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 79222 79830 . - . ID=gene-AC57_RS03525;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AC57_RS03525;old_locus_tag=AC57_4379 NZ_JJLR01000144.1 Protein Homology CDS 79222 79830 . - 0 ID=cds-WP_032237140.1;Parent=gene-AC57_RS03525;Dbxref=GenBank:WP_032237140.1;Name=WP_032237140.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418372.1;locus_tag=AC57_RS03525;product=YiiX family permuted papain-like enzyme;protein_id=WP_032237140.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 80014 80331 . - . ID=gene-AC57_RS03520;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AC57_RS03520;old_locus_tag=AC57_4380 NZ_JJLR01000144.1 Protein Homology CDS 80014 80331 . - 0 ID=cds-WP_000852812.1;Parent=gene-AC57_RS03520;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AC57_RS03520;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 80608 81768 . + . ID=gene-AC57_RS03515;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AC57_RS03515;old_locus_tag=AC57_4381 NZ_JJLR01000144.1 Protein Homology CDS 80608 81768 . + 0 ID=cds-WP_001295694.1;Parent=gene-AC57_RS03515;Dbxref=GenBank:WP_001295694.1;Name=WP_001295694.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=AC57_RS03515;product=cystathionine gamma-synthase;protein_id=WP_001295694.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 81771 84203 . + . ID=gene-AC57_RS03510;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AC57_RS03510;old_locus_tag=AC57_4382 NZ_JJLR01000144.1 Protein Homology CDS 81771 84203 . + 0 ID=cds-WP_000110772.1;Parent=gene-AC57_RS03510;Dbxref=GenBank:WP_000110772.1;Name=WP_000110772.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AC57_RS03510;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110772.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 84342 84476 . - . ID=gene-AC57_RS31070;Name=AC57_RS31070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31070;old_locus_tag=AC57_4383 NZ_JJLR01000144.1 GeneMarkS-2+ CDS 84342 84476 . - 0 ID=cds-WP_000660586.1;Parent=gene-AC57_RS31070;Dbxref=GenBank:WP_000660586.1;Name=WP_000660586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS31070;product=hypothetical protein;protein_id=WP_000660586.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 84552 85442 . + . ID=gene-AC57_RS03500;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AC57_RS03500;old_locus_tag=AC57_4384 NZ_JJLR01000144.1 Protein Homology CDS 84552 85442 . + 0 ID=cds-WP_000007523.1;Parent=gene-AC57_RS03500;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AC57_RS03500;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 85772 87952 . + . ID=gene-AC57_RS03495;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AC57_RS03495;old_locus_tag=AC57_4385 NZ_JJLR01000144.1 Protein Homology CDS 85772 87952 . + 0 ID=cds-WP_032237141.1;Parent=gene-AC57_RS03495;Dbxref=GenBank:WP_032237141.1;Name=WP_032237141.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=AC57_RS03495;product=catalase/peroxidase HPI;protein_id=WP_032237141.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 88046 88951 . + . ID=gene-AC57_RS03490;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AC57_RS03490;old_locus_tag=AC57_4386 NZ_JJLR01000144.1 Protein Homology CDS 88046 88951 . + 0 ID=cds-WP_001271262.1;Parent=gene-AC57_RS03490;Dbxref=GenBank:WP_001271262.1;Name=WP_001271262.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418378.4;locus_tag=AC57_RS03490;product=cystine transporter YijE;protein_id=WP_001271262.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 88978 89595 . - . ID=gene-AC57_RS03485;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AC57_RS03485;old_locus_tag=AC57_4387 NZ_JJLR01000144.1 Protein Homology CDS 88978 89595 . - 0 ID=cds-WP_000647891.1;Parent=gene-AC57_RS03485;Dbxref=GenBank:WP_000647891.1;Name=WP_000647891.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418379.1;locus_tag=AC57_RS03485;product=DUF1287 domain-containing protein;protein_id=WP_000647891.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 89870 90973 . - . ID=gene-AC57_RS03480;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AC57_RS03480;old_locus_tag=AC57_4388 NZ_JJLR01000144.1 Protein Homology CDS 89870 90973 . - 0 ID=cds-WP_000374004.1;Parent=gene-AC57_RS03480;Dbxref=GenBank:WP_000374004.1;Name=WP_000374004.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AC57_RS03480;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_000374004.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 90984 91646 . - . ID=gene-AC57_RS03475;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AC57_RS03475;old_locus_tag=AC57_4389 NZ_JJLR01000144.1 Protein Homology CDS 90984 91646 . - 0 ID=cds-WP_000424840.1;Parent=gene-AC57_RS03475;Dbxref=GenBank:WP_000424840.1;Name=WP_000424840.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418381.1;locus_tag=AC57_RS03475;product=fructose-6-phosphate aldolase;protein_id=WP_000424840.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 91658 94159 . - . ID=gene-AC57_RS03470;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC57_RS03470;old_locus_tag=AC57_4390 NZ_JJLR01000144.1 Protein Homology CDS 91658 94159 . - 0 ID=cds-WP_032237142.1;Parent=gene-AC57_RS03470;Dbxref=GenBank:WP_032237142.1;Name=WP_032237142.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=AC57_RS03470;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032237142.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 94468 95547 . + . ID=gene-AC57_RS03465;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AC57_RS03465;old_locus_tag=AC57_4391 NZ_JJLR01000144.1 Protein Homology CDS 94468 95547 . + 0 ID=cds-WP_001004446.1;Parent=gene-AC57_RS03465;Dbxref=GenBank:WP_001004446.1;Name=WP_001004446.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AC57_RS03465;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004446.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 95562 95882 . + . ID=gene-AC57_RS03460;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AC57_RS03460;old_locus_tag=AC57_4392 NZ_JJLR01000144.1 Protein Homology CDS 95562 95882 . + 0 ID=cds-WP_000161265.1;Parent=gene-AC57_RS03460;Dbxref=GenBank:WP_000161265.1;Name=WP_000161265.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AC57_RS03460;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000161265.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 95933 98230 . + . ID=gene-AC57_RS03455;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AC57_RS03455;old_locus_tag=AC57_4393 NZ_JJLR01000144.1 Protein Homology CDS 95933 98230 . + 0 ID=cds-WP_000184811.1;Parent=gene-AC57_RS03455;Dbxref=GenBank:WP_000184811.1;Name=WP_000184811.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418386.1;locus_tag=AC57_RS03455;product=formate C-acetyltransferase;protein_id=WP_000184811.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 98196 99074 . + . ID=gene-AC57_RS03450;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=AC57_RS03450;old_locus_tag=AC57_4394 NZ_JJLR01000144.1 Protein Homology CDS 98196 99074 . + 0 ID=cds-WP_000204105.1;Parent=gene-AC57_RS03450;Dbxref=GenBank:WP_000204105.1;Name=WP_000204105.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418387.3;locus_tag=AC57_RS03450;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_000204105.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 99076 99417 . + . ID=gene-AC57_RS03445;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AC57_RS03445;old_locus_tag=AC57_4395 NZ_JJLR01000144.1 Protein Homology CDS 99076 99417 . + 0 ID=cds-WP_000323846.1;Parent=gene-AC57_RS03445;Dbxref=GenBank:WP_000323846.1;Name=WP_000323846.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418388.1;locus_tag=AC57_RS03445;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323846.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 99404 100255 . - . ID=gene-AC57_RS03440;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AC57_RS03440;old_locus_tag=AC57_4396 NZ_JJLR01000144.1 Protein Homology CDS 99404 100255 . - 0 ID=cds-WP_032279451.1;Parent=gene-AC57_RS03440;Dbxref=GenBank:WP_032279451.1;Name=WP_032279451.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709754.1;locus_tag=AC57_RS03440;product=AraC family transcriptional regulator;protein_id=WP_032279451.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 100470 102203 . - . ID=gene-AC57_RS03435;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AC57_RS03435;old_locus_tag=AC57_4397 NZ_JJLR01000144.1 Protein Homology CDS 100470 102203 . - 0 ID=cds-WP_000556295.1;Parent=gene-AC57_RS03435;Dbxref=GenBank:WP_000556295.1;Name=WP_000556295.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709755.2;locus_tag=AC57_RS03435;product=phosphoethanolamine transferase CptA;protein_id=WP_000556295.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 102385 105036 . - . ID=gene-AC57_RS03430;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AC57_RS03430;old_locus_tag=AC57_4398 NZ_JJLR01000144.1 Protein Homology CDS 102385 105036 . - 0 ID=cds-WP_001005579.1;Parent=gene-AC57_RS03430;Dbxref=GenBank:WP_001005579.1;Name=WP_001005579.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AC57_RS03430;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005579.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 106249 107400 . - . ID=gene-AC57_RS03425;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AC57_RS03425;old_locus_tag=AC57_4401 NZ_JJLR01000144.1 Protein Homology CDS 106249 107400 . - 0 ID=cds-WP_001298964.1;Parent=gene-AC57_RS03425;Dbxref=GenBank:WP_001298964.1;Name=WP_001298964.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AC57_RS03425;product=acetylornithine deacetylase;protein_id=WP_001298964.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 107554 108558 . + . ID=gene-AC57_RS03420;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AC57_RS03420;old_locus_tag=AC57_4402 NZ_JJLR01000144.1 Protein Homology CDS 107554 108558 . + 0 ID=cds-WP_001710976.1;Parent=gene-AC57_RS03420;Dbxref=GenBank:WP_001710976.1;Name=WP_001710976.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AC57_RS03420;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_001710976.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 108566 109342 . + . ID=gene-AC57_RS03415;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AC57_RS03415;old_locus_tag=AC57_4403 NZ_JJLR01000144.1 Protein Homology CDS 108566 109342 . + 0 ID=cds-WP_077756468.1;Parent=gene-AC57_RS03415;Dbxref=GenBank:WP_077756468.1;Name=WP_077756468.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AC57_RS03415;product=acetylglutamate kinase;protein_id=WP_077756468.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 109403 110776 . + . ID=gene-AC57_RS03410;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AC57_RS03410;old_locus_tag=AC57_4404 NZ_JJLR01000144.1 Protein Homology CDS 109403 110776 . + 0 ID=cds-WP_001230087.1;Parent=gene-AC57_RS03410;Dbxref=GenBank:WP_001230087.1;Name=WP_001230087.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=AC57_RS03410;product=argininosuccinate lyase;protein_id=WP_001230087.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 111043 111960 . + . ID=gene-AC57_RS03405;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AC57_RS03405;old_locus_tag=AC57_4405 NZ_JJLR01000144.1 Protein Homology CDS 111043 111960 . + 0 ID=cds-WP_001025939.1;Parent=gene-AC57_RS03405;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AC57_RS03405;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 111943 113343 . - . ID=gene-AC57_RS03400;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AC57_RS03400;old_locus_tag=AC57_4406 NZ_JJLR01000144.1 Protein Homology CDS 111943 113343 . - 0 ID=cds-WP_001120810.1;Parent=gene-AC57_RS03400;Dbxref=GenBank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AC57_RS03400;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 113674 114324 . + . ID=gene-AC57_RS03395;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AC57_RS03395;old_locus_tag=AC57_4408 NZ_JJLR01000144.1 Protein Homology CDS 113674 114324 . + 0 ID=cds-WP_136502845.1;Parent=gene-AC57_RS03395;Dbxref=GenBank:WP_136502845.1;Name=WP_136502845.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AC57_RS03395;product=HTH-type transcriptional repressor FabR;protein_id=WP_136502845.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 114324 114683 . + . ID=gene-AC57_RS03390;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AC57_RS03390;old_locus_tag=AC57_4409 NZ_JJLR01000144.1 Protein Homology CDS 114324 114683 . + 0 ID=cds-WP_000806411.1;Parent=gene-AC57_RS03390;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AC57_RS03390;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 114723 115823 . - . ID=gene-AC57_RS03385;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AC57_RS03385;old_locus_tag=AC57_4410 NZ_JJLR01000144.1 Protein Homology CDS 114723 115823 . - 0 ID=cds-WP_000187022.1;Parent=gene-AC57_RS03385;Dbxref=GenBank:WP_000187022.1;Name=WP_000187022.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418400.1;locus_tag=AC57_RS03385;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187022.1;transl_table=11 NZ_JJLR01000144.1 cmsearch riboswitch 115937 116126 . + . ID=id-NZ_JJLR01000144.1:115937..116126;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLR01000144.1 RefSeq gene 116192 118075 . + . ID=gene-AC57_RS03380;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AC57_RS03380;old_locus_tag=AC57_4411 NZ_JJLR01000144.1 Protein Homology CDS 116192 118075 . + 0 ID=cds-WP_000591385.1;Parent=gene-AC57_RS03380;Dbxref=GenBank:WP_000591385.1;Name=WP_000591385.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224408.1;locus_tag=AC57_RS03380;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_000591385.1;transl_table=11 NZ_JJLR01000144.1 RefSeq gene 118020 118877 . + . ID=gene-AC57_RS03375;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AC57_RS03375;old_locus_tag=AC57_4412 NZ_JJLR01000144.1 Protein Homology CDS 118020 118877 . + 0 ID=cds-WP_071999898.1;Parent=gene-AC57_RS03375;Dbxref=GenBank:WP_071999898.1;Name=WP_071999898.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312258.1;locus_tag=AC57_RS03375;product=glutamate racemase;protein_id=WP_071999898.1;transl_table=11 ##sequence-region NZ_JJLR01000145.1 1 1672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000145.1 RefSeq region 1 1672 . + . ID=NZ_JJLR01000145.1:1..1672;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000145.1 RefSeq gene 350 1672 . + . ID=gene-AC57_RS03370;Name=AC57_RS03370;end_range=1672,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS03370;old_locus_tag=AC57_4413;partial=true NZ_JJLR01000145.1 cmsearch rRNA 350 1672 . + . ID=rna-AC57_RS03370;Parent=gene-AC57_RS03370;Dbxref=RFAM:RF00177;end_range=1672,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03370;partial=true;product=16S ribosomal RNA NZ_JJLR01000145.1 cmsearch exon 350 1672 . + . ID=exon-AC57_RS03370-1;Parent=rna-AC57_RS03370;Dbxref=RFAM:RF00177;end_range=1672,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03370;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLR01000146.1 1 490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000146.1 RefSeq region 1 490 . + . ID=NZ_JJLR01000146.1:1..490;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000146.1 RefSeq gene 132 247 . + . ID=gene-AC57_RS03365;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS03365;old_locus_tag=AC57_4414 NZ_JJLR01000146.1 cmsearch rRNA 132 247 . + . ID=rna-AC57_RS03365;Parent=gene-AC57_RS03365;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03365;product=5S ribosomal RNA NZ_JJLR01000146.1 cmsearch exon 132 247 . + . ID=exon-AC57_RS03365-1;Parent=rna-AC57_RS03365;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03365;product=5S ribosomal RNA NZ_JJLR01000146.1 RefSeq gene 262 337 . + . ID=gene-AC57_RS03360;Name=AC57_RS03360;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS03360;old_locus_tag=AC57_4415 NZ_JJLR01000146.1 tRNAscan-SE tRNA 262 337 . + . ID=rna-AC57_RS03360;Parent=gene-AC57_RS03360;anticodon=(pos:295..297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03360;product=tRNA-Thr NZ_JJLR01000146.1 tRNAscan-SE exon 262 337 . + . ID=exon-AC57_RS03360-1;Parent=rna-AC57_RS03360;anticodon=(pos:295..297);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03360;product=tRNA-Thr NZ_JJLR01000146.1 RefSeq gene 377 490 . + . ID=gene-AC57_RS03355;Name=rrf;end_range=490,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS03355;old_locus_tag=AC57_4416;partial=true NZ_JJLR01000146.1 cmsearch rRNA 377 490 . + . ID=rna-AC57_RS03355;Parent=gene-AC57_RS03355;Dbxref=RFAM:RF00001;end_range=490,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03355;partial=true;product=5S ribosomal RNA NZ_JJLR01000146.1 cmsearch exon 377 490 . + . ID=exon-AC57_RS03355-1;Parent=rna-AC57_RS03355;Dbxref=RFAM:RF00001;end_range=490,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03355;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JJLR01000147.1 1 4808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000147.1 RefSeq region 1 4808 . + . ID=NZ_JJLR01000147.1:1..4808;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000147.1 RefSeq gene 326 1354 . + . ID=gene-AC57_RS03350;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AC57_RS03350;old_locus_tag=AC57_4417 NZ_JJLR01000147.1 Protein Homology CDS 326 1354 . + 0 ID=cds-WP_001016674.1;Parent=gene-AC57_RS03350;Dbxref=GenBank:WP_001016674.1;Name=WP_001016674.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312926.1;locus_tag=AC57_RS03350;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016674.1;transl_table=11 NZ_JJLR01000147.1 RefSeq gene 1351 2316 . + . ID=gene-AC57_RS03345;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AC57_RS03345;old_locus_tag=AC57_4418 NZ_JJLR01000147.1 Protein Homology CDS 1351 2316 . + 0 ID=cds-WP_000654620.1;Parent=gene-AC57_RS03345;Dbxref=GenBank:WP_000654620.1;Name=WP_000654620.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=AC57_RS03345;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_000654620.1;transl_table=11 NZ_JJLR01000147.1 RefSeq gene 2345 3295 . - . ID=gene-AC57_RS03340;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AC57_RS03340;old_locus_tag=AC57_4419 NZ_JJLR01000147.1 Protein Homology CDS 2345 3295 . - 0 ID=cds-WP_000023081.1;Parent=gene-AC57_RS03340;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AC57_RS03340;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JJLR01000147.1 RefSeq gene 3657 3732 . + . ID=gene-AC57_RS03335;Name=AC57_RS03335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS03335;old_locus_tag=AC57_4421 NZ_JJLR01000147.1 tRNAscan-SE tRNA 3657 3732 . + . ID=rna-AC57_RS03335;Parent=gene-AC57_RS03335;anticodon=(pos:3690..3692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03335;product=tRNA-Thr NZ_JJLR01000147.1 tRNAscan-SE exon 3657 3732 . + . ID=exon-AC57_RS03335-1;Parent=rna-AC57_RS03335;anticodon=(pos:3690..3692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03335;product=tRNA-Thr NZ_JJLR01000147.1 RefSeq gene 3741 3825 . + . ID=gene-AC57_RS03330;Name=AC57_RS03330;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS03330;old_locus_tag=AC57_4422 NZ_JJLR01000147.1 tRNAscan-SE tRNA 3741 3825 . + . ID=rna-AC57_RS03330;Parent=gene-AC57_RS03330;anticodon=(pos:3775..3777);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03330;product=tRNA-Tyr NZ_JJLR01000147.1 tRNAscan-SE exon 3741 3825 . + . ID=exon-AC57_RS03330-1;Parent=rna-AC57_RS03330;anticodon=(pos:3775..3777);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03330;product=tRNA-Tyr NZ_JJLR01000147.1 RefSeq gene 3942 4016 . + . ID=gene-AC57_RS03325;Name=AC57_RS03325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS03325;old_locus_tag=AC57_4423 NZ_JJLR01000147.1 tRNAscan-SE tRNA 3942 4016 . + . ID=rna-AC57_RS03325;Parent=gene-AC57_RS03325;anticodon=(pos:3975..3977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03325;product=tRNA-Gly NZ_JJLR01000147.1 tRNAscan-SE exon 3942 4016 . + . ID=exon-AC57_RS03325-1;Parent=rna-AC57_RS03325;anticodon=(pos:3975..3977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03325;product=tRNA-Gly NZ_JJLR01000147.1 RefSeq gene 4023 4098 . + . ID=gene-AC57_RS03320;Name=AC57_RS03320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS03320;old_locus_tag=AC57_4424 NZ_JJLR01000147.1 tRNAscan-SE tRNA 4023 4098 . + . ID=rna-AC57_RS03320;Parent=gene-AC57_RS03320;anticodon=(pos:4056..4058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03320;product=tRNA-Thr NZ_JJLR01000147.1 tRNAscan-SE exon 4023 4098 . + . ID=exon-AC57_RS03320-1;Parent=rna-AC57_RS03320;anticodon=(pos:4056..4058);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03320;product=tRNA-Thr NZ_JJLR01000147.1 RefSeq gene 4213 4808 . + . ID=gene-AC57_RS03315;Name=AC57_RS03315;end_range=4808,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03315;old_locus_tag=AC57_4425;partial=true NZ_JJLR01000147.1 Protein Homology CDS 4213 4808 . + 0 ID=cds-WP_000031754.1-2;Parent=gene-AC57_RS03315;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;end_range=4808,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC57_RS03315;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;transl_table=11 ##sequence-region NZ_JJLR01000148.1 1 32094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000148.1 RefSeq region 1 32094 . + . ID=NZ_JJLR01000148.1:1..32094;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000148.1 RefSeq gene 1 588 . + . ID=gene-AC57_RS03310;Name=AC57_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03310;old_locus_tag=AC57_4426;partial=true;start_range=.,1 NZ_JJLR01000148.1 Protein Homology CDS 1 588 . + 0 ID=cds-WP_000542098.1;Parent=gene-AC57_RS03310;Dbxref=GenBank:WP_000542098.1;Name=WP_000542098.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AC57_RS03310;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_000542098.1;start_range=.,1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 818 1201 . + . ID=gene-AC57_RS03305;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AC57_RS03305;old_locus_tag=AC57_4427 NZ_JJLR01000148.1 Protein Homology CDS 818 1201 . + 0 ID=cds-WP_001275702.1;Parent=gene-AC57_RS03305;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AC57_RS03305;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 1203 1748 . + . ID=gene-AC57_RS03300;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AC57_RS03300;old_locus_tag=AC57_4428 NZ_JJLR01000148.1 Protein Homology CDS 1203 1748 . + 0 ID=cds-WP_001287516.1;Parent=gene-AC57_RS03300;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AC57_RS03300;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 1907 2335 . + . ID=gene-AC57_RS03295;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AC57_RS03295;old_locus_tag=AC57_4429 NZ_JJLR01000148.1 Protein Homology CDS 1907 2335 . + 0 ID=cds-WP_001085926.1;Parent=gene-AC57_RS03295;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AC57_RS03295;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 2339 3043 . + . ID=gene-AC57_RS03290;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AC57_RS03290;old_locus_tag=AC57_4430 NZ_JJLR01000148.1 Protein Homology CDS 2339 3043 . + 0 ID=cds-WP_001096684.1;Parent=gene-AC57_RS03290;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AC57_RS03290;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 3456 3953 . + . ID=gene-AC57_RS03285;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AC57_RS03285;old_locus_tag=AC57_4431 NZ_JJLR01000148.1 Protein Homology CDS 3456 3953 . + 0 ID=cds-WP_001207201.1;Parent=gene-AC57_RS03285;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AC57_RS03285;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 4020 4385 . + . ID=gene-AC57_RS03280;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AC57_RS03280;old_locus_tag=AC57_4432 NZ_JJLR01000148.1 Protein Homology CDS 4020 4385 . + 0 ID=cds-WP_000028878.1;Parent=gene-AC57_RS03280;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AC57_RS03280;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 4705 8733 . + . ID=gene-AC57_RS03275;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AC57_RS03275;old_locus_tag=AC57_4433 NZ_JJLR01000148.1 Protein Homology CDS 4705 8733 . + 0 ID=cds-WP_000263098.1;Parent=gene-AC57_RS03275;Dbxref=GenBank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AC57_RS03275;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 8810 13033 . + . ID=gene-AC57_RS03270;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AC57_RS03270;old_locus_tag=AC57_4434 NZ_JJLR01000148.1 Protein Homology CDS 8810 13033 . + 0 ID=cds-WP_000653944.1;Parent=gene-AC57_RS03270;Dbxref=GenBank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AC57_RS03270;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 13246 13785 . + . ID=gene-AC57_RS03265;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AC57_RS03265;old_locus_tag=AC57_4435 NZ_JJLR01000148.1 Protein Homology CDS 13246 13785 . + 0 ID=cds-WP_001307500.1;Parent=gene-AC57_RS03265;Dbxref=GenBank:WP_001307500.1;Name=WP_001307500.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AC57_RS03265;product=heat-shock protein C;protein_id=WP_001307500.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 14195 15328 . - . ID=gene-AC57_RS03260;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AC57_RS03260;old_locus_tag=AC57_4436 NZ_JJLR01000148.1 Protein Homology CDS 14195 15328 . - 0 ID=cds-WP_000847447.1;Parent=gene-AC57_RS03260;Dbxref=GenBank:WP_000847447.1;Name=WP_000847447.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418417.1;locus_tag=AC57_RS03260;product=2-iminoacetate synthase ThiH;protein_id=WP_000847447.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 15325 16095 . - . ID=gene-AC57_RS03255;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AC57_RS03255;old_locus_tag=AC57_4437 NZ_JJLR01000148.1 Protein Homology CDS 15325 16095 . - 0 ID=cds-WP_000944104.1;Parent=gene-AC57_RS03255;Dbxref=GenBank:WP_000944104.1;Name=WP_000944104.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418418.2;locus_tag=AC57_RS03255;product=thiazole synthase;protein_id=WP_000944104.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 16097 16297 . - . ID=gene-AC57_RS03250;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AC57_RS03250;old_locus_tag=AC57_4438 NZ_JJLR01000148.1 Protein Homology CDS 16097 16297 . - 0 ID=cds-WP_001166226.1;Parent=gene-AC57_RS03250;Dbxref=GenBank:WP_001166226.1;Name=WP_001166226.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=AC57_RS03250;product=sulfur carrier protein ThiS;protein_id=WP_001166226.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 16281 17036 . - . ID=gene-AC57_RS03245;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AC57_RS03245;old_locus_tag=AC57_4439 NZ_JJLR01000148.1 Protein Homology CDS 16281 17036 . - 0 ID=cds-WP_000999737.1;Parent=gene-AC57_RS03245;Dbxref=GenBank:WP_000999737.1;Name=WP_000999737.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AC57_RS03245;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999737.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 17029 17664 . - . ID=gene-AC57_RS03240;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AC57_RS03240;old_locus_tag=AC57_4440 NZ_JJLR01000148.1 Protein Homology CDS 17029 17664 . - 0 ID=cds-WP_000284615.1;Parent=gene-AC57_RS03240;Dbxref=GenBank:WP_000284615.1;Name=WP_000284615.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418421.1;locus_tag=AC57_RS03240;product=thiamine phosphate synthase;protein_id=WP_000284615.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 17664 19559 . - . ID=gene-AC57_RS03235;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AC57_RS03235;old_locus_tag=AC57_4441 NZ_JJLR01000148.1 Protein Homology CDS 17664 19559 . - 0 ID=cds-WP_032174862.1;Parent=gene-AC57_RS03235;Dbxref=GenBank:WP_032174862.1;Name=WP_032174862.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312944.1;locus_tag=AC57_RS03235;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_032174862.1;transl_table=11 NZ_JJLR01000148.1 cmsearch riboswitch 19640 19740 . - . ID=id-NZ_JJLR01000148.1:19640..19740;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLR01000148.1 RefSeq gene 19793 20269 . - . ID=gene-AC57_RS03230;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AC57_RS03230;old_locus_tag=AC57_4442 NZ_JJLR01000148.1 Protein Homology CDS 19793 20269 . - 0 ID=cds-WP_000934302.1;Parent=gene-AC57_RS03230;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AC57_RS03230;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 20364 21137 . + . ID=gene-AC57_RS03225;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AC57_RS03225;old_locus_tag=AC57_4443 NZ_JJLR01000148.1 Protein Homology CDS 20364 21137 . + 0 ID=cds-WP_000373940.1;Parent=gene-AC57_RS03225;Dbxref=GenBank:WP_000373940.1;Name=WP_000373940.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026280.1;locus_tag=AC57_RS03225;product=NAD(+) diphosphatase;protein_id=WP_000373940.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 21177 22241 . + . ID=gene-AC57_RS03220;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AC57_RS03220;old_locus_tag=AC57_4444 NZ_JJLR01000148.1 Protein Homology CDS 21177 22241 . + 0 ID=cds-WP_032237674.1;Parent=gene-AC57_RS03220;Dbxref=GenBank:WP_032237674.1;Name=WP_032237674.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AC57_RS03220;product=uroporphyrinogen decarboxylase;protein_id=WP_032237674.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 22251 22922 . + . ID=gene-AC57_RS03215;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AC57_RS03215;old_locus_tag=AC57_4445 NZ_JJLR01000148.1 Protein Homology CDS 22251 22922 . + 0 ID=cds-WP_032237673.1;Parent=gene-AC57_RS03215;Dbxref=GenBank:WP_032237673.1;Name=WP_032237673.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AC57_RS03215;product=deoxyribonuclease V;protein_id=WP_032237673.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 22965 23555 . + . ID=gene-AC57_RS03210;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AC57_RS03210;old_locus_tag=AC57_4446 NZ_JJLR01000148.1 Protein Homology CDS 22965 23555 . + 0 ID=cds-WP_000940106.1;Parent=gene-AC57_RS03210;Dbxref=GenBank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AC57_RS03210;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 23742 24014 . + . ID=gene-AC57_RS03205;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AC57_RS03205;old_locus_tag=AC57_4447 NZ_JJLR01000148.1 Protein Homology CDS 23742 24014 . + 0 ID=cds-WP_001044513.1;Parent=gene-AC57_RS03205;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AC57_RS03205;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 24027 24722 . + . ID=gene-AC57_RS03200;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AC57_RS03200;old_locus_tag=AC57_4448 NZ_JJLR01000148.1 Protein Homology CDS 24027 24722 . + 0 ID=cds-WP_001300651.1;Parent=gene-AC57_RS03200;Dbxref=GenBank:WP_001300651.1;Name=WP_001300651.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709795.2;locus_tag=AC57_RS03200;product=DUF1481 domain-containing protein;protein_id=WP_001300651.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 24724 25143 . - . ID=gene-AC57_RS03195;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AC57_RS03195;old_locus_tag=AC57_4449 NZ_JJLR01000148.1 Protein Homology CDS 24724 25143 . - 0 ID=cds-WP_001296714.1;Parent=gene-AC57_RS03195;Dbxref=GenBank:WP_001296714.1;Name=WP_001296714.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AC57_RS03195;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_001296714.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 25381 26757 . + . ID=gene-AC57_RS03190;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AC57_RS03190;old_locus_tag=AC57_4451 NZ_JJLR01000148.1 Protein Homology CDS 25381 26757 . + 0 ID=cds-WP_001211923.1;Parent=gene-AC57_RS03190;Dbxref=GenBank:WP_001211923.1;Name=WP_001211923.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709797.1;locus_tag=AC57_RS03190;product=two-component system sensor histidine kinase ZraS;protein_id=WP_001211923.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 26754 28079 . + . ID=gene-AC57_RS03185;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AC57_RS03185;old_locus_tag=AC57_4452 NZ_JJLR01000148.1 Protein Homology CDS 26754 28079 . + 0 ID=cds-WP_000148551.1;Parent=gene-AC57_RS03185;Dbxref=GenBank:WP_000148551.1;Name=WP_000148551.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AC57_RS03185;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000148551.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 28076 29365 . - . ID=gene-AC57_RS03180;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AC57_RS03180;old_locus_tag=AC57_4453 NZ_JJLR01000148.1 Protein Homology CDS 28076 29365 . - 0 ID=cds-WP_000866812.1;Parent=gene-AC57_RS03180;Dbxref=GenBank:WP_000866812.1;Name=WP_000866812.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AC57_RS03180;product=phosphoribosylamine--glycine ligase;protein_id=WP_000866812.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 29377 30966 . - . ID=gene-AC57_RS03175;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AC57_RS03175;old_locus_tag=AC57_4454 NZ_JJLR01000148.1 Protein Homology CDS 29377 30966 . - 0 ID=cds-WP_001187559.1;Parent=gene-AC57_RS03175;Dbxref=GenBank:WP_001187559.1;Name=WP_001187559.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AC57_RS03175;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001187559.1;transl_table=11 NZ_JJLR01000148.1 RefSeq gene 31583 32094 . + . ID=gene-AC57_RS03170;Name=AC57_RS03170;end_range=32094,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS03170;old_locus_tag=AC57_4456;partial=true NZ_JJLR01000148.1 cmsearch rRNA 31583 32094 . + . ID=rna-AC57_RS03170;Parent=gene-AC57_RS03170;Dbxref=RFAM:RF00177;end_range=32094,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03170;partial=true;product=16S ribosomal RNA NZ_JJLR01000148.1 cmsearch exon 31583 32094 . + . ID=exon-AC57_RS03170-1;Parent=rna-AC57_RS03170;Dbxref=RFAM:RF00177;end_range=32094,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03170;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLR01000149.1 1 1957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000149.1 RefSeq region 1 1957 . + . ID=NZ_JJLR01000149.1:1..1957;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000149.1 RefSeq gene 1 769 . + . ID=gene-AC57_RS0125475;Name=AC57_RS0125475;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS0125475;partial=true;start_range=.,1 NZ_JJLR01000149.1 cmsearch rRNA 1 769 . + . ID=rna-AC57_RS0125475;Parent=gene-AC57_RS0125475;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125475;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLR01000149.1 cmsearch exon 1 769 . + . ID=exon-AC57_RS0125475-1;Parent=rna-AC57_RS0125475;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125475;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLR01000149.1 RefSeq gene 966 1041 . + . ID=gene-AC57_RS03165;Name=AC57_RS03165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS03165;old_locus_tag=AC57_4457 NZ_JJLR01000149.1 tRNAscan-SE tRNA 966 1041 . + . ID=rna-AC57_RS03165;Parent=gene-AC57_RS03165;anticodon=(pos:1000..1002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03165;product=tRNA-Glu NZ_JJLR01000149.1 tRNAscan-SE exon 966 1041 . + . ID=exon-AC57_RS03165-1;Parent=rna-AC57_RS03165;anticodon=(pos:1000..1002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS03165;product=tRNA-Glu NZ_JJLR01000149.1 RefSeq gene 1226 1957 . + . ID=gene-AC57_RS0125480;Name=AC57_RS0125480;end_range=1957,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS0125480;partial=true NZ_JJLR01000149.1 cmsearch rRNA 1226 1957 . + . ID=rna-AC57_RS0125480;Parent=gene-AC57_RS0125480;Dbxref=RFAM:RF02541;end_range=1957,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125480;partial=true;product=23S ribosomal RNA NZ_JJLR01000149.1 cmsearch exon 1226 1957 . + . ID=exon-AC57_RS0125480-1;Parent=rna-AC57_RS0125480;Dbxref=RFAM:RF02541;end_range=1957,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125480;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLR01000150.1 1 483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000150.1 RefSeq region 1 483 . + . ID=NZ_JJLR01000150.1:1..483;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000150.1 RefSeq gene 159 274 . + . ID=gene-AC57_RS03160;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS03160;old_locus_tag=AC57_4459 NZ_JJLR01000150.1 cmsearch rRNA 159 274 . + . ID=rna-AC57_RS03160;Parent=gene-AC57_RS03160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03160;product=5S ribosomal RNA NZ_JJLR01000150.1 cmsearch exon 159 274 . + . ID=exon-AC57_RS03160-1;Parent=rna-AC57_RS03160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS03160;product=5S ribosomal RNA ##sequence-region NZ_JJLR01000151.1 1 5312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000151.1 RefSeq region 1 5312 . + . ID=NZ_JJLR01000151.1:1..5312;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000151.1 RefSeq gene 62 445 . + . ID=gene-AC57_RS03155;Name=AC57_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03155;old_locus_tag=AC57_4460 NZ_JJLR01000151.1 Protein Homology CDS 62 445 . + 0 ID=cds-WP_001326558.1-2;Parent=gene-AC57_RS03155;Dbxref=GenBank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AC57_RS03155;product=YjaA family stress response protein;protein_id=WP_001326558.1;transl_table=11 NZ_JJLR01000151.1 RefSeq gene 508 951 . - . ID=gene-AC57_RS0125490;Name=AC57_RS0125490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125490;old_locus_tag=AC57_4461 NZ_JJLR01000151.1 Protein Homology CDS 508 951 . - 0 ID=cds-WP_000237004.1;Parent=gene-AC57_RS0125490;Dbxref=GenBank:WP_000237004.1;Name=WP_000237004.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418436.1;locus_tag=AC57_RS0125490;product=acetyltransferase;protein_id=WP_000237004.1;transl_table=11 NZ_JJLR01000151.1 RefSeq gene 1108 2037 . + . ID=gene-AC57_RS03150;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AC57_RS03150;old_locus_tag=AC57_4462 NZ_JJLR01000151.1 Protein Homology CDS 1108 2037 . + 0 ID=cds-WP_001122777.1;Parent=gene-AC57_RS03150;Dbxref=GenBank:WP_001122777.1;Name=WP_001122777.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AC57_RS03150;product=homoserine O-acetyltransferase MetA;protein_id=WP_001122777.1;transl_table=11 NZ_JJLR01000151.1 RefSeq gene 2306 3907 . + . ID=gene-AC57_RS03145;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AC57_RS03145;old_locus_tag=AC57_4463 NZ_JJLR01000151.1 Protein Homology CDS 2306 3907 . + 0 ID=cds-WP_000138905.1;Parent=gene-AC57_RS03145;Dbxref=GenBank:WP_000138905.1;Name=WP_000138905.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418438.1;locus_tag=AC57_RS03145;product=malate synthase A;protein_id=WP_000138905.1;transl_table=11 NZ_JJLR01000151.1 RefSeq gene 3937 5241 . + . ID=gene-AC57_RS03140;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AC57_RS03140;old_locus_tag=AC57_4464 NZ_JJLR01000151.1 Protein Homology CDS 3937 5241 . + 0 ID=cds-WP_000857856.1;Parent=gene-AC57_RS03140;Dbxref=GenBank:WP_000857856.1;Name=WP_000857856.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AC57_RS03140;product=isocitrate lyase;protein_id=WP_000857856.1;transl_table=11 ##sequence-region NZ_JJLR01000152.1 1 23958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000152.1 RefSeq region 1 23958 . + . ID=NZ_JJLR01000152.1:1..23958;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000152.1 RefSeq gene 1 1103 . + . ID=gene-AC57_RS03135;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AC57_RS03135;old_locus_tag=AC57_4465;partial=true;start_range=.,1 NZ_JJLR01000152.1 Protein Homology CDS 1 1103 . + 2 ID=cds-WP_032285753.1;Parent=gene-AC57_RS03135;Dbxref=GenBank:WP_032285753.1;Name=WP_032285753.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AC57_RS03135;partial=true;product=isocitrate lyase;protein_id=WP_032285753.1;start_range=.,1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 1678 3414 . + . ID=gene-AC57_RS03130;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AC57_RS03130;old_locus_tag=AC57_4467 NZ_JJLR01000152.1 Protein Homology CDS 1678 3414 . + 0 ID=cds-WP_001724180.1;Parent=gene-AC57_RS03130;Dbxref=GenBank:WP_001724180.1;Name=WP_001724180.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AC57_RS03130;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_001724180.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 3383 4957 . - . ID=gene-AC57_RS03125;Name=AC57_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03125;old_locus_tag=AC57_4468 NZ_JJLR01000152.1 Protein Homology CDS 3383 4957 . - 0 ID=cds-WP_032279957.1;Parent=gene-AC57_RS03125;Dbxref=GenBank:WP_032279957.1;Name=WP_032279957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418441.1;locus_tag=AC57_RS03125;product=ShET2/EspL2 family type III secretion system effector toxin;protein_id=WP_032279957.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 5274 6098 . - . ID=gene-AC57_RS03120;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AC57_RS03120;old_locus_tag=AC57_4469 NZ_JJLR01000152.1 Protein Homology CDS 5274 6098 . - 0 ID=cds-WP_000226403.1;Parent=gene-AC57_RS03120;Dbxref=GenBank:WP_000226403.1;Name=WP_000226403.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AC57_RS03120;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226403.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 6298 9981 . + . ID=gene-AC57_RS03115;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AC57_RS03115;old_locus_tag=AC57_4470 NZ_JJLR01000152.1 Protein Homology CDS 6298 9981 . + 0 ID=cds-WP_000096011.1;Parent=gene-AC57_RS03115;Dbxref=GenBank:WP_000096011.1;Name=WP_000096011.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418443.1;locus_tag=AC57_RS03115;product=methionine synthase;protein_id=WP_000096011.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 10201 11832 . + . ID=gene-AC57_RS03110;Name=yjbB;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=AC57_RS03110;old_locus_tag=AC57_4471 NZ_JJLR01000152.1 Protein Homology CDS 10201 11832 . + 0 ID=cds-WP_032237651.1;Parent=gene-AC57_RS03110;Dbxref=GenBank:WP_032237651.1;Name=WP_032237651.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;gene=yjbB;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AC57_RS03110;product=Na/Pi cotransporter family protein;protein_id=WP_032237651.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 11923 12612 . - . ID=gene-AC57_RS03105;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AC57_RS03105;old_locus_tag=AC57_4472 NZ_JJLR01000152.1 Protein Homology CDS 11923 12612 . - 0 ID=cds-WP_000421763.1;Parent=gene-AC57_RS03105;Dbxref=GenBank:WP_000421763.1;Name=WP_000421763.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=AC57_RS03105;product=dipeptidase PepE;protein_id=WP_000421763.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 12824 13696 . + . ID=gene-AC57_RS03100;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AC57_RS03100;old_locus_tag=AC57_4473 NZ_JJLR01000152.1 Protein Homology CDS 12824 13696 . + 0 ID=cds-WP_000936376.1;Parent=gene-AC57_RS03100;Dbxref=GenBank:WP_000936376.1;Name=WP_000936376.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418446.1;locus_tag=AC57_RS03100;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936376.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 13829 14101 . - . ID=gene-AC57_RS03095;Name=yjbD;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=AC57_RS03095;old_locus_tag=AC57_4474 NZ_JJLR01000152.1 Protein Homology CDS 13829 14101 . - 0 ID=cds-WP_001207634.1;Parent=gene-AC57_RS03095;Dbxref=GenBank:WP_001207634.1;Name=WP_001207634.1;gbkey=CDS;gene=yjbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418447.1;locus_tag=AC57_RS03095;product=DUF3811 domain-containing protein;protein_id=WP_001207634.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 14354 15703 . - . ID=gene-AC57_RS03090;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC57_RS03090;old_locus_tag=AC57_4475 NZ_JJLR01000152.1 Protein Homology CDS 14354 15703 . - 0 ID=cds-WP_001290318.1;Parent=gene-AC57_RS03090;Dbxref=GenBank:WP_001290318.1;Name=WP_001290318.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313034.1;locus_tag=AC57_RS03090;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290318.1;transl_table=11 NZ_JJLR01000152.1 cmsearch riboswitch 15795 15991 . - . ID=id-NZ_JJLR01000152.1:15795..15991;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLR01000152.1 RefSeq gene 16228 17877 . + . ID=gene-AC57_RS03085;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AC57_RS03085;old_locus_tag=AC57_4476 NZ_JJLR01000152.1 Protein Homology CDS 16228 17877 . + 0 ID=cds-WP_000789986.1;Parent=gene-AC57_RS03085;Dbxref=GenBank:WP_000789986.1;Name=WP_000789986.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=AC57_RS03085;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 18386 18628 . + . ID=gene-AC57_RS03080;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AC57_RS03080;old_locus_tag=AC57_4477 NZ_JJLR01000152.1 Protein Homology CDS 18386 18628 . + 0 ID=cds-WP_000757333.1;Parent=gene-AC57_RS03080;Dbxref=GenBank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AC57_RS03080;product=exopolysaccharide production protein YjbE;protein_id=WP_000757333.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 18743 19381 . + . ID=gene-AC57_RS03075;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=AC57_RS03075;old_locus_tag=AC57_4478 NZ_JJLR01000152.1 Protein Homology CDS 18743 19381 . + 0 ID=cds-WP_001301119.1;Parent=gene-AC57_RS03075;Dbxref=GenBank:WP_001301119.1;Name=WP_001301119.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AC57_RS03075;product=YjbF family lipoprotein;protein_id=WP_001301119.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 19378 20115 . + . ID=gene-AC57_RS03070;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=AC57_RS03070;old_locus_tag=AC57_4479 NZ_JJLR01000152.1 Protein Homology CDS 19378 20115 . + 0 ID=cds-WP_000595505.1;Parent=gene-AC57_RS03070;Dbxref=GenBank:WP_000595505.1;Name=WP_000595505.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418452.1;locus_tag=AC57_RS03070;product=capsule biosynthesis GfcC family protein;protein_id=WP_000595505.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 20115 22211 . + . ID=gene-AC57_RS03065;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=AC57_RS03065;old_locus_tag=AC57_4480 NZ_JJLR01000152.1 Protein Homology CDS 20115 22211 . + 0 ID=cds-WP_032279959.1;Parent=gene-AC57_RS03065;Dbxref=GenBank:WP_032279959.1;Name=WP_032279959.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AC57_RS03065;product=YjbH domain-containing protein;protein_id=WP_032279959.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 22258 22536 . - . ID=gene-AC57_RS29380;Name=AC57_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS29380 NZ_JJLR01000152.1 Protein Homology CDS 22258 22536 . - 0 ID=cds-WP_024171050.1;Parent=gene-AC57_RS29380;Dbxref=GenBank:WP_024171050.1;Name=WP_024171050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AC57_RS29380;product=hypothetical protein;protein_id=WP_024171050.1;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 22806 23216 . + . ID=gene-AC57_RS03055;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AC57_RS03055;old_locus_tag=AC57_4483 NZ_JJLR01000152.1 Protein Homology CDS 22806 23216 . + 0 ID=cds-WP_000202902.1;Parent=gene-AC57_RS03055;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AC57_RS03055;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JJLR01000152.1 RefSeq pseudogene 23260 23703 . - . ID=gene-AC57_RS03050;Name=AC57_RS03050;end_range=23703,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS03050;old_locus_tag=AC57_4484;partial=true;pseudo=true NZ_JJLR01000152.1 Protein Homology CDS 23260 23703 . - 0 ID=cds-AC57_RS03050;Parent=gene-AC57_RS03050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=23703,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AC57_RS03050;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_JJLR01000152.1 RefSeq gene 23719 23958 . - . ID=gene-AC57_RS03045;Name=AC57_RS03045;end_range=23958,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS03045;old_locus_tag=AC57_4485;partial=true NZ_JJLR01000152.1 Protein Homology CDS 23719 23958 . - 0 ID=cds-WP_001509131.1;Parent=gene-AC57_RS03045;Dbxref=GenBank:WP_001509131.1;Name=WP_001509131.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=23958,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS03045;partial=true;product=IS1 family transposase;protein_id=WP_001509131.1;transl_table=11 ##sequence-region NZ_JJLR01000153.1 1 20169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000153.1 RefSeq region 1 20169 . + . ID=NZ_JJLR01000153.1:1..20169;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000153.1 RefSeq gene 1 242 . - . ID=gene-AC57_RS0125505;Name=AC57_RS0125505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125505;old_locus_tag=AC57_4486;partial=true;start_range=.,1 NZ_JJLR01000153.1 Protein Homology CDS 1 242 . - 0 ID=cds-WP_000179208.1-4;Parent=gene-AC57_RS0125505;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0125505;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;start_range=.,1;transl_table=11 NZ_JJLR01000153.1 RefSeq pseudogene 295 1338 . - . ID=gene-AC57_RS03040;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=pseudogene;locus_tag=AC57_RS03040;old_locus_tag=AC57_4487;partial=true;pseudo=true;start_range=.,295 NZ_JJLR01000153.1 Protein Homology CDS 295 1338 . - 0 ID=cds-AC57_RS03040;Parent=gene-AC57_RS03040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AC57_RS03040;partial=true;product=D-xylose transporter XylE;pseudo=true;start_range=.,295;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 1710 2600 . - . ID=gene-AC57_RS03035;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AC57_RS03035;old_locus_tag=AC57_4488 NZ_JJLR01000153.1 Protein Homology CDS 1710 2600 . - 0 ID=cds-WP_001252058.1;Parent=gene-AC57_RS03035;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AC57_RS03035;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 2615 4159 . - . ID=gene-AC57_RS03030;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AC57_RS03030;old_locus_tag=AC57_4489 NZ_JJLR01000153.1 Protein Homology CDS 2615 4159 . - 0 ID=cds-WP_001297290.1;Parent=gene-AC57_RS03030;Dbxref=GenBank:WP_001297290.1;Name=WP_001297290.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AC57_RS03030;product=maltose ABC transporter permease MalF;protein_id=WP_001297290.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 4313 5503 . - . ID=gene-AC57_RS03025;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AC57_RS03025;old_locus_tag=AC57_4490 NZ_JJLR01000153.1 Protein Homology CDS 4313 5503 . - 0 ID=cds-WP_000695387.1;Parent=gene-AC57_RS03025;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AC57_RS03025;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 5868 6983 . + . ID=gene-AC57_RS03020;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AC57_RS03020;old_locus_tag=AC57_4491 NZ_JJLR01000153.1 Protein Homology CDS 5868 6983 . + 0 ID=cds-WP_000179165.1;Parent=gene-AC57_RS03020;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AC57_RS03020;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 7055 8395 . + . ID=gene-AC57_RS03015;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AC57_RS03015;old_locus_tag=AC57_4492 NZ_JJLR01000153.1 Protein Homology CDS 7055 8395 . + 0 ID=cds-WP_000973675.1;Parent=gene-AC57_RS03015;Dbxref=GenBank:WP_000973675.1;Name=WP_000973675.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313046.1;locus_tag=AC57_RS03015;product=maltoporin LamB;protein_id=WP_000973675.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 8638 9558 . + . ID=gene-AC57_RS03010;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AC57_RS03010;old_locus_tag=AC57_4493 NZ_JJLR01000153.1 Protein Homology CDS 8638 9558 . + 0 ID=cds-WP_000783444.1;Parent=gene-AC57_RS03010;Dbxref=GenBank:WP_000783444.1;Name=WP_000783444.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=AC57_RS03010;product=maltose operon protein MalM;protein_id=WP_000783444.1;transl_table=11 NZ_JJLR01000153.1 RefSeq pseudogene 9787 11367 . + . ID=gene-AC57_RS03000;Name=AC57_RS03000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS03000;old_locus_tag=AC57_4495;pseudo=true NZ_JJLR01000153.1 Protein Homology CDS 9787 11367 . + 0 ID=cds-AC57_RS03000;Parent=gene-AC57_RS03000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313048.1;locus_tag=AC57_RS03000;product=SopA family protein;pseudo=true;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 11590 12087 . + . ID=gene-AC57_RS02995;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AC57_RS02995;old_locus_tag=AC57_4496 NZ_JJLR01000153.1 Protein Homology CDS 11590 12087 . + 0 ID=cds-WP_032237164.1;Parent=gene-AC57_RS02995;Dbxref=GenBank:WP_032237164.1;Name=WP_032237164.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=AC57_RS02995;product=chorismate lyase;protein_id=WP_032237164.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 12100 12972 . + . ID=gene-AC57_RS02990;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AC57_RS02990;old_locus_tag=AC57_4497 NZ_JJLR01000153.1 Protein Homology CDS 12100 12972 . + 0 ID=cds-WP_032237163.1;Parent=gene-AC57_RS02990;Dbxref=GenBank:WP_032237163.1;Name=WP_032237163.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AC57_RS02990;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_032237163.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 13127 15550 . - . ID=gene-AC57_RS02985;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AC57_RS02985;old_locus_tag=AC57_4498 NZ_JJLR01000153.1 Protein Homology CDS 13127 15550 . - 0 ID=cds-WP_000017354.1;Parent=gene-AC57_RS02985;Dbxref=GenBank:WP_000017354.1;Name=WP_000017354.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AC57_RS02985;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_000017354.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 15721 16089 . + . ID=gene-AC57_RS02980;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AC57_RS02980;old_locus_tag=AC57_4499 NZ_JJLR01000153.1 Protein Homology CDS 15721 16089 . + 0 ID=cds-WP_000002907.1;Parent=gene-AC57_RS02980;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AC57_RS02980;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 16199 16807 . + . ID=gene-AC57_RS02975;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AC57_RS02975;old_locus_tag=AC57_4500 NZ_JJLR01000153.1 Protein Homology CDS 16199 16807 . + 0 ID=cds-WP_000646078.1;Parent=gene-AC57_RS02975;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AC57_RS02975;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 16880 18205 . + . ID=gene-AC57_RS02970;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AC57_RS02970;old_locus_tag=AC57_4501 NZ_JJLR01000153.1 Protein Homology CDS 16880 18205 . + 0 ID=cds-WP_001324904.1;Parent=gene-AC57_RS02970;Dbxref=GenBank:WP_001324904.1;Name=WP_001324904.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AC57_RS02970;product=MATE family efflux transporter DinF;protein_id=WP_001324904.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 18321 18530 . + . ID=gene-AC57_RS02965;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AC57_RS02965;old_locus_tag=AC57_4502 NZ_JJLR01000153.1 Protein Homology CDS 18321 18530 . + 0 ID=cds-WP_001030593.1;Parent=gene-AC57_RS02965;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AC57_RS02965;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JJLR01000153.1 RefSeq gene 18572 19087 . - . ID=gene-AC57_RS02960;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AC57_RS02960;old_locus_tag=AC57_4503 NZ_JJLR01000153.1 Protein Homology CDS 18572 19087 . - 0 ID=cds-WP_001295691.1;Parent=gene-AC57_RS02960;Dbxref=GenBank:WP_001295691.1;Name=WP_001295691.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AC57_RS02960;product=zinc uptake transcriptional repressor Zur;protein_id=WP_001295691.1;transl_table=11 NZ_JJLR01000153.1 RefSeq pseudogene 19406 19828 . + . ID=gene-AC57_RS31275;Name=AC57_RS31275;end_range=19828,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31275;partial=true;pseudo=true NZ_JJLR01000153.1 Protein Homology CDS 19406 19828 . + 0 ID=cds-AC57_RS31275;Parent=gene-AC57_RS31275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=19828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AC57_RS31275;partial=true;product=DUF2713 family protein;pseudo=true;transl_table=11 NZ_JJLR01000153.1 RefSeq pseudogene 19844 20169 . - . ID=gene-AC57_RS28140;Name=AC57_RS28140;end_range=20169,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28140;old_locus_tag=AC57_4504;partial=true;pseudo=true NZ_JJLR01000153.1 Protein Homology CDS 19844 20169 . - 2 ID=cds-AC57_RS28140;Parent=gene-AC57_RS28140;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=20169,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS28140;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000154.1 1 91190 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000154.1 RefSeq region 1 91190 . + . ID=NZ_JJLR01000154.1:1..91190;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000154.1 RefSeq gene 1 231 . - . ID=gene-AC57_RS0125520;Name=AC57_RS0125520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125520;old_locus_tag=AC57_4505;partial=true;start_range=.,1 NZ_JJLR01000154.1 Protein Homology CDS 1 231 . - 0 ID=cds-WP_001397795.1-4;Parent=gene-AC57_RS0125520;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS0125520;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;start_range=.,1;transl_table=11 NZ_JJLR01000154.1 RefSeq pseudogene 287 865 . + . ID=gene-AC57_RS0125525;Name=AC57_RS0125525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125525;partial=true;pseudo=true;start_range=.,287 NZ_JJLR01000154.1 Protein Homology CDS 287 865 . + 0 ID=cds-AC57_RS0125525;Parent=gene-AC57_RS0125525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AC57_RS0125525;partial=true;product=DUF2713 family protein;pseudo=true;start_range=.,287;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 1226 2263 . + . ID=gene-AC57_RS02955;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AC57_RS02955;old_locus_tag=AC57_4507 NZ_JJLR01000154.1 Protein Homology CDS 1226 2263 . + 0 ID=cds-WP_077756469.1;Parent=gene-AC57_RS02955;Dbxref=GenBank:WP_077756469.1;Name=WP_077756469.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AC57_RS02955;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_077756469.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 2397 2639 . + . ID=gene-AC57_RS02950;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AC57_RS02950;old_locus_tag=AC57_4508 NZ_JJLR01000154.1 Protein Homology CDS 2397 2639 . + 0 ID=cds-WP_000891404.1;Parent=gene-AC57_RS02950;Dbxref=GenBank:WP_000891404.1;Name=WP_000891404.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AC57_RS02950;product=envelope stress response protein PspG;protein_id=WP_000891404.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 2805 3788 . - . ID=gene-AC57_RS02945;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AC57_RS02945;old_locus_tag=AC57_4509 NZ_JJLR01000154.1 Protein Homology CDS 2805 3788 . - 0 ID=cds-WP_032279769.1;Parent=gene-AC57_RS02945;Dbxref=GenBank:WP_032279769.1;Name=WP_032279769.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=AC57_RS02945;product=quinone oxidoreductase;protein_id=WP_032279769.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 3871 5286 . + . ID=gene-AC57_RS02940;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AC57_RS02940;old_locus_tag=AC57_4510 NZ_JJLR01000154.1 Protein Homology CDS 3871 5286 . + 0 ID=cds-WP_000918363.1;Parent=gene-AC57_RS02940;Dbxref=GenBank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AC57_RS02940;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 5339 6418 . + . ID=gene-AC57_RS02935;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AC57_RS02935;old_locus_tag=AC57_4511 NZ_JJLR01000154.1 Protein Homology CDS 5339 6418 . + 0 ID=cds-WP_001147328.1;Parent=gene-AC57_RS02935;Dbxref=GenBank:WP_001147328.1;Name=WP_001147328.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418477.1;locus_tag=AC57_RS02935;product=alanine racemase;protein_id=WP_001147328.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 6671 7864 . + . ID=gene-AC57_RS02930;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AC57_RS02930;old_locus_tag=AC57_4513 NZ_JJLR01000154.1 Protein Homology CDS 6671 7864 . + 0 ID=cds-WP_000486988.1;Parent=gene-AC57_RS02930;Dbxref=GenBank:WP_000486988.1;Name=WP_000486988.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418478.1;locus_tag=AC57_RS02930;product=aromatic amino acid transaminase;protein_id=WP_000486988.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 8366 8569 . - . ID=gene-AC57_RS29405;Name=yjbS;gbkey=Gene;gene=yjbS;gene_biotype=protein_coding;locus_tag=AC57_RS29405;old_locus_tag=AC57_4514 NZ_JJLR01000154.1 Protein Homology CDS 8366 8569 . - 0 ID=cds-WP_001321562.1;Parent=gene-AC57_RS29405;Dbxref=GenBank:WP_001321562.1;Name=WP_001321562.1;gbkey=CDS;gene=yjbS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AC57_RS29405;product=protein YjbS;protein_id=WP_001321562.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 8971 9684 . + . ID=gene-AC57_RS0125535;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=AC57_RS0125535;old_locus_tag=AC57_4516 NZ_JJLR01000154.1 Protein Homology CDS 8971 9684 . + 0 ID=cds-WP_032216498.1;Parent=gene-AC57_RS0125535;Dbxref=GenBank:WP_032216498.1;Name=WP_032216498.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418479.1;locus_tag=AC57_RS0125535;product=acid phosphatase AphA;protein_id=WP_032216498.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 9795 10211 . + . ID=gene-AC57_RS02925;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AC57_RS02925;old_locus_tag=AC57_4517 NZ_JJLR01000154.1 Protein Homology CDS 9795 10211 . + 0 ID=cds-WP_000270375.1;Parent=gene-AC57_RS02925;Dbxref=GenBank:WP_000270375.1;Name=WP_000270375.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AC57_RS02925;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270375.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 10215 10571 . + . ID=gene-AC57_RS02920;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AC57_RS02920;old_locus_tag=AC57_4518 NZ_JJLR01000154.1 Protein Homology CDS 10215 10571 . + 0 ID=cds-WP_000155657.1;Parent=gene-AC57_RS02920;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AC57_RS02920;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 10606 13428 . - . ID=gene-AC57_RS02915;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AC57_RS02915;old_locus_tag=AC57_4519 NZ_JJLR01000154.1 Protein Homology CDS 10606 13428 . - 0 ID=cds-WP_000357740.1;Parent=gene-AC57_RS02915;Dbxref=GenBank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AC57_RS02915;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 13682 14218 . + . ID=gene-AC57_RS02910;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AC57_RS02910;old_locus_tag=AC57_4520 NZ_JJLR01000154.1 Protein Homology CDS 13682 14218 . + 0 ID=cds-WP_000168305.1;Parent=gene-AC57_RS02910;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AC57_RS02910;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 14317 14598 . - . ID=gene-AC57_RS02905;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AC57_RS02905;old_locus_tag=AC57_4521 NZ_JJLR01000154.1 Protein Homology CDS 14317 14598 . - 0 ID=cds-WP_001295689.1;Parent=gene-AC57_RS02905;Dbxref=GenBank:WP_001295689.1;Name=WP_001295689.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AC57_RS02905;product=YjcB family protein;protein_id=WP_001295689.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 15028 16614 . + . ID=gene-AC57_RS02900;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=protein_coding;locus_tag=AC57_RS02900;old_locus_tag=AC57_4522 NZ_JJLR01000154.1 Protein Homology CDS 15028 16614 . + 0 ID=cds-WP_032279770.1;Parent=gene-AC57_RS02900;Dbxref=GenBank:WP_032279770.1;Name=WP_032279770.1;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AC57_RS02900;product=c-di-GMP phosphodiesterase PdeC;protein_id=WP_032279770.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 16617 16940 . - . ID=gene-AC57_RS02895;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AC57_RS02895;old_locus_tag=AC57_4523 NZ_JJLR01000154.1 Protein Homology CDS 16617 16940 . - 0 ID=cds-WP_000019358.1;Parent=gene-AC57_RS02895;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AC57_RS02895;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 17026 17490 . + . ID=gene-AC57_RS02890;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AC57_RS02890;old_locus_tag=AC57_4524 NZ_JJLR01000154.1 Protein Homology CDS 17026 17490 . + 0 ID=cds-WP_000412428.1;Parent=gene-AC57_RS02890;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AC57_RS02890;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 18036 19385 . + . ID=gene-AC57_RS02885;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AC57_RS02885;old_locus_tag=AC57_4526 NZ_JJLR01000154.1 Protein Homology CDS 18036 19385 . + 0 ID=cds-WP_000106882.1;Parent=gene-AC57_RS02885;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AC57_RS02885;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 19536 21185 . + . ID=gene-AC57_RS02880;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AC57_RS02880;old_locus_tag=AC57_4527 NZ_JJLR01000154.1 Protein Homology CDS 19536 21185 . + 0 ID=cds-WP_000402207.1;Parent=gene-AC57_RS02880;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AC57_RS02880;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 21339 22631 . - . ID=gene-AC57_RS02875;Name=espX5;gbkey=Gene;gene=espX5;gene_biotype=protein_coding;locus_tag=AC57_RS02875;old_locus_tag=AC57_4528 NZ_JJLR01000154.1 Protein Homology CDS 21339 22631 . - 0 ID=cds-WP_032237161.1;Parent=gene-AC57_RS02875;Dbxref=GenBank:WP_032237161.1;Name=WP_032237161.1;gbkey=CDS;gene=espX5;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418490.1;locus_tag=AC57_RS02875;product=T3SS effector pentapeptide repeat protein EspX5;protein_id=WP_032237161.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 22809 24458 . - . ID=gene-AC57_RS02870;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AC57_RS02870;old_locus_tag=AC57_4529 NZ_JJLR01000154.1 Protein Homology CDS 22809 24458 . - 0 ID=cds-WP_032279771.1;Parent=gene-AC57_RS02870;Dbxref=GenBank:WP_032279771.1;Name=WP_032279771.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418491.1;locus_tag=AC57_RS02870;product=cation/acetate symporter ActP;protein_id=WP_032279771.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 24455 24769 . - . ID=gene-AC57_RS02865;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AC57_RS02865;old_locus_tag=AC57_4530 NZ_JJLR01000154.1 Protein Homology CDS 24455 24769 . - 0 ID=cds-WP_001014565.1;Parent=gene-AC57_RS02865;Dbxref=GenBank:WP_001014565.1;Name=WP_001014565.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418492.1;locus_tag=AC57_RS02865;product=DUF485 domain-containing protein;protein_id=WP_001014565.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 24970 26928 . - . ID=gene-AC57_RS02860;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AC57_RS02860;old_locus_tag=AC57_4531 NZ_JJLR01000154.1 Protein Homology CDS 24970 26928 . - 0 ID=cds-WP_000078209.1;Parent=gene-AC57_RS02860;Dbxref=GenBank:WP_000078209.1;Name=WP_000078209.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AC57_RS02860;product=acetate--CoA ligase;protein_id=WP_000078209.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 27321 28757 . + . ID=gene-AC57_RS02855;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AC57_RS02855;old_locus_tag=AC57_4532 NZ_JJLR01000154.1 Protein Homology CDS 27321 28757 . + 0 ID=cds-WP_000196875.1;Parent=gene-AC57_RS02855;Dbxref=GenBank:WP_000196875.1;Name=WP_000196875.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AC57_RS02855;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 28802 29368 . + . ID=gene-AC57_RS02850;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AC57_RS02850;old_locus_tag=AC57_4533 NZ_JJLR01000154.1 Protein Homology CDS 28802 29368 . + 0 ID=cds-WP_001298875.1;Parent=gene-AC57_RS02850;Dbxref=GenBank:WP_001298875.1;Name=WP_001298875.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AC57_RS02850;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001298875.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 29365 30036 . + . ID=gene-AC57_RS02845;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AC57_RS02845;old_locus_tag=AC57_4534 NZ_JJLR01000154.1 Protein Homology CDS 29365 30036 . + 0 ID=cds-WP_000220281.1;Parent=gene-AC57_RS02845;Dbxref=GenBank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AC57_RS02845;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 30033 30989 . + . ID=gene-AC57_RS02840;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AC57_RS02840;old_locus_tag=AC57_4535 NZ_JJLR01000154.1 Protein Homology CDS 30033 30989 . + 0 ID=cds-WP_001565363.1;Parent=gene-AC57_RS02840;Dbxref=GenBank:WP_001565363.1;Name=WP_001565363.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AC57_RS02840;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_001565363.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 31009 32727 . + . ID=gene-AC57_RS02835;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AC57_RS02835;old_locus_tag=AC57_4536 NZ_JJLR01000154.1 Protein Homology CDS 31009 32727 . + 0 ID=cds-WP_071593620.1;Parent=gene-AC57_RS02835;Dbxref=GenBank:WP_071593620.1;Name=WP_071593620.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AC57_RS02835;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071593620.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 32720 33103 . + . ID=gene-AC57_RS02830;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AC57_RS02830;old_locus_tag=AC57_4537 NZ_JJLR01000154.1 Protein Homology CDS 32720 33103 . + 0 ID=cds-WP_001032546.1;Parent=gene-AC57_RS02830;Dbxref=GenBank:WP_001032546.1;Name=WP_001032546.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418499.1;locus_tag=AC57_RS02830;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_001032546.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 33100 33696 . + . ID=gene-AC57_RS02825;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AC57_RS02825;old_locus_tag=AC57_4538 NZ_JJLR01000154.1 Protein Homology CDS 33100 33696 . + 0 ID=cds-WP_001562449.1;Parent=gene-AC57_RS02825;Dbxref=GenBank:WP_001562449.1;Name=WP_001562449.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313085.1;locus_tag=AC57_RS02825;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_001562449.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 34038 35351 . + . ID=gene-AC57_RS02820;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AC57_RS02820;old_locus_tag=AC57_4540 NZ_JJLR01000154.1 Protein Homology CDS 34038 35351 . + 0 ID=cds-WP_000789589.1;Parent=gene-AC57_RS02820;Dbxref=GenBank:WP_000789589.1;Name=WP_000789589.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AC57_RS02820;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000789589.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 35656 36345 . - . ID=gene-AC57_RS02815;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AC57_RS02815;old_locus_tag=AC57_4541 NZ_JJLR01000154.1 Protein Homology CDS 35656 36345 . - 0 ID=cds-WP_000719886.1;Parent=gene-AC57_RS02815;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AC57_RS02815;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 36439 38586 . - . ID=gene-AC57_RS02810;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AC57_RS02810;old_locus_tag=AC57_4542 NZ_JJLR01000154.1 Protein Homology CDS 36439 38586 . - 0 ID=cds-WP_077756470.1;Parent=gene-AC57_RS02810;Dbxref=GenBank:WP_077756470.1;Name=WP_077756470.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AC57_RS02810;product=formate dehydrogenase subunit alpha;protein_id=WP_077756470.1;transl_except=(pos:complement(38167..38169)%2Caa:Sec);transl_table=11 NZ_JJLR01000154.1 RefSeq gene 38784 40250 . - . ID=gene-AC57_RS02800;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AC57_RS02800;old_locus_tag=AC57_4545 NZ_JJLR01000154.1 Protein Homology CDS 38784 40250 . - 0 ID=cds-WP_000610564.1;Parent=gene-AC57_RS02800;Dbxref=GenBank:WP_000610564.1;Name=WP_000610564.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709855.1;locus_tag=AC57_RS02800;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_000610564.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 40247 42298 . - . ID=gene-AC57_RS02795;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AC57_RS02795;old_locus_tag=AC57_4546 NZ_JJLR01000154.1 Protein Homology CDS 40247 42298 . - 0 ID=cds-WP_032285755.1;Parent=gene-AC57_RS02795;Dbxref=GenBank:WP_032285755.1;Name=WP_032285755.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418505.2;locus_tag=AC57_RS02795;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_032285755.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 42298 43329 . - . ID=gene-AC57_RS02790;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AC57_RS02790;old_locus_tag=AC57_4547 NZ_JJLR01000154.1 Protein Homology CDS 42298 43329 . - 0 ID=cds-WP_000446376.1;Parent=gene-AC57_RS02790;Dbxref=GenBank:WP_000446376.1;Name=WP_000446376.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AC57_RS02790;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446376.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 43348 43623 . - . ID=gene-AC57_RS02785;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=AC57_RS02785;old_locus_tag=AC57_4548 NZ_JJLR01000154.1 Protein Homology CDS 43348 43623 . - 0 ID=cds-WP_001355613.1;Parent=gene-AC57_RS02785;Dbxref=GenBank:WP_001355613.1;Name=WP_001355613.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165334.1;locus_tag=AC57_RS02785;product=YtcA family lipoprotein;protein_id=WP_001355613.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 43832 45817 . - . ID=gene-AC57_RS02780;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AC57_RS02780;old_locus_tag=AC57_4549 NZ_JJLR01000154.1 Protein Homology CDS 43832 45817 . - 0 ID=cds-WP_001355612.1;Parent=gene-AC57_RS02780;Dbxref=GenBank:WP_001355612.1;Name=WP_001355612.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AC57_RS02780;product=alkyl sulfatase YjcS;protein_id=WP_001355612.1;transl_table=11 NZ_JJLR01000154.1 RefSeq pseudogene 46090 47021 . - . ID=gene-AC57_RS0125540;Name=alsK;gbkey=Gene;gene=alsK;gene_biotype=pseudogene;locus_tag=AC57_RS0125540;pseudo=true NZ_JJLR01000154.1 Protein Homology CDS 46090 47021 . - 0 ID=cds-AC57_RS0125540;Parent=gene-AC57_RS0125540;Note=frameshifted;Ontology_term=GO:0019316,GO:0019200;gbkey=CDS;gene=alsK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=D-allose catabolic process|0019316||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418508.1;locus_tag=AC57_RS0125540;product=allose kinase;pseudo=true;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 47005 47700 . - . ID=gene-AC57_RS02775;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=AC57_RS02775;old_locus_tag=AC57_4552 NZ_JJLR01000154.1 Protein Homology CDS 47005 47700 . - 0 ID=cds-WP_001355611.1;Parent=gene-AC57_RS02775;Dbxref=GenBank:WP_001355611.1;Name=WP_001355611.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418509.1;locus_tag=AC57_RS02775;product=D-allulose-6-phosphate 3-epimerase;protein_id=WP_001355611.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 47711 48691 . - . ID=gene-AC57_RS02770;Name=alsC;gbkey=Gene;gene=alsC;gene_biotype=protein_coding;locus_tag=AC57_RS02770;old_locus_tag=AC57_4553 NZ_JJLR01000154.1 Protein Homology CDS 47711 48691 . - 0 ID=cds-WP_000507106.1;Parent=gene-AC57_RS02770;Dbxref=GenBank:WP_000507106.1;Name=WP_000507106.1;gbkey=CDS;gene=alsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418510.1;locus_tag=AC57_RS02770;product=D-allose ABC transporter permease;protein_id=WP_000507106.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 48670 50202 . - . ID=gene-AC57_RS02765;Name=alsA;gbkey=Gene;gene=alsA;gene_biotype=protein_coding;locus_tag=AC57_RS02765;old_locus_tag=AC57_4554 NZ_JJLR01000154.1 Protein Homology CDS 48670 50202 . - 0 ID=cds-WP_001565367.1;Parent=gene-AC57_RS02765;Dbxref=GenBank:WP_001565367.1;Name=WP_001565367.1;gbkey=CDS;gene=alsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418511.1;locus_tag=AC57_RS02765;product=D-allose ABC transporter ATP-binding protein AlsA;protein_id=WP_001565367.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 50329 51264 . - . ID=gene-AC57_RS02760;Name=alsB;gbkey=Gene;gene=alsB;gene_biotype=protein_coding;locus_tag=AC57_RS02760;old_locus_tag=AC57_4555 NZ_JJLR01000154.1 Protein Homology CDS 50329 51264 . - 0 ID=cds-WP_001046189.1;Parent=gene-AC57_RS02760;Dbxref=GenBank:WP_001046189.1;Name=WP_001046189.1;gbkey=CDS;gene=alsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418512.1;locus_tag=AC57_RS02760;product=D-allose transporter substrate-binding protein;protein_id=WP_001046189.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 51323 52213 . - . ID=gene-AC57_RS02755;Name=alsR;gbkey=Gene;gene=alsR;gene_biotype=protein_coding;locus_tag=AC57_RS02755;old_locus_tag=AC57_4556 NZ_JJLR01000154.1 Protein Homology CDS 51323 52213 . - 0 ID=cds-WP_000083214.1;Parent=gene-AC57_RS02755;Dbxref=GenBank:WP_000083214.1;Name=WP_000083214.1;gbkey=CDS;gene=alsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418513.4;locus_tag=AC57_RS02755;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000083214.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 52572 53021 . + . ID=gene-AC57_RS02750;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;gene_synonym=alsI;locus_tag=AC57_RS02750;old_locus_tag=AC57_4557 NZ_JJLR01000154.1 Protein Homology CDS 52572 53021 . + 0 ID=cds-WP_000716794.1;Parent=gene-AC57_RS02750;Dbxref=GenBank:WP_000716794.1;Name=WP_000716794.1;gbkey=CDS;gene=rpiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418514.1;locus_tag=AC57_RS02750;product=bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase RpiB;protein_id=WP_000716794.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 53090 53419 . + . ID=gene-AC57_RS02745;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AC57_RS02745;old_locus_tag=AC57_4558 NZ_JJLR01000154.1 Protein Homology CDS 53090 53419 . + 0 ID=cds-WP_032279850.1;Parent=gene-AC57_RS02745;Dbxref=GenBank:WP_032279850.1;Name=WP_032279850.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026281.1;locus_tag=AC57_RS02745;product=DDRRRQL repeat protein YjdP;protein_id=WP_032279850.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 53566 54324 . - . ID=gene-AC57_RS02740;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AC57_RS02740;old_locus_tag=AC57_4559 NZ_JJLR01000154.1 Protein Homology CDS 53566 54324 . - 0 ID=cds-WP_000059930.1;Parent=gene-AC57_RS02740;Dbxref=GenBank:WP_000059930.1;Name=WP_000059930.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418516.1;locus_tag=AC57_RS02740;product=phosphonate metabolism protein PhnP;protein_id=WP_000059930.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 54326 54760 . - . ID=gene-AC57_RS02735;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AC57_RS02735;old_locus_tag=AC57_4560 NZ_JJLR01000154.1 Protein Homology CDS 54326 54760 . - 0 ID=cds-WP_001110490.1;Parent=gene-AC57_RS02735;Dbxref=GenBank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AC57_RS02735;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 54747 55304 . - . ID=gene-AC57_RS02730;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AC57_RS02730;old_locus_tag=AC57_4561 NZ_JJLR01000154.1 Protein Homology CDS 54747 55304 . - 0 ID=cds-WP_032237156.1;Parent=gene-AC57_RS02730;Dbxref=GenBank:WP_032237156.1;Name=WP_032237156.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AC57_RS02730;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_032237156.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 55304 56440 . - . ID=gene-AC57_RS02725;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AC57_RS02725;old_locus_tag=AC57_4562 NZ_JJLR01000154.1 Protein Homology CDS 55304 56440 . - 0 ID=cds-WP_000586287.1;Parent=gene-AC57_RS02725;Dbxref=GenBank:WP_000586287.1;Name=WP_000586287.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=AC57_RS02725;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_000586287.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 56437 57117 . - . ID=gene-AC57_RS02720;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AC57_RS02720;old_locus_tag=AC57_4563 NZ_JJLR01000154.1 Protein Homology CDS 56437 57117 . - 0 ID=cds-WP_000611395.1;Parent=gene-AC57_RS02720;Dbxref=GenBank:WP_000611395.1;Name=WP_000611395.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418520.1;locus_tag=AC57_RS02720;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611395.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 57228 57986 . - . ID=gene-AC57_RS02715;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AC57_RS02715;old_locus_tag=AC57_4564 NZ_JJLR01000154.1 Protein Homology CDS 57228 57986 . - 0 ID=cds-WP_001398151.1;Parent=gene-AC57_RS02715;Dbxref=GenBank:WP_001398151.1;Name=WP_001398151.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313107.1;locus_tag=AC57_RS02715;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001398151.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 57983 58828 . - . ID=gene-AC57_RS02710;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AC57_RS02710;old_locus_tag=AC57_4565 NZ_JJLR01000154.1 Protein Homology CDS 57983 58828 . - 0 ID=cds-WP_000002298.1;Parent=gene-AC57_RS02710;Dbxref=GenBank:WP_000002298.1;Name=WP_000002298.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418522.1;locus_tag=AC57_RS02710;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_000002298.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 58821 59885 . - . ID=gene-AC57_RS02705;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AC57_RS02705;old_locus_tag=AC57_4566 NZ_JJLR01000154.1 Protein Homology CDS 58821 59885 . - 0 ID=cds-WP_001565370.1;Parent=gene-AC57_RS02705;Dbxref=GenBank:WP_001565370.1;Name=WP_001565370.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418523.1;locus_tag=AC57_RS02705;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001565370.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 59885 60469 . - . ID=gene-AC57_RS02700;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AC57_RS02700;old_locus_tag=AC57_4567 NZ_JJLR01000154.1 Protein Homology CDS 59885 60469 . - 0 ID=cds-WP_000171611.1;Parent=gene-AC57_RS02700;Dbxref=GenBank:WP_000171611.1;Name=WP_000171611.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313110.1;locus_tag=AC57_RS02700;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171611.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 60466 60918 . - . ID=gene-AC57_RS02695;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AC57_RS02695;old_locus_tag=AC57_4568 NZ_JJLR01000154.1 Protein Homology CDS 60466 60918 . - 0 ID=cds-WP_000542796.1;Parent=gene-AC57_RS02695;Dbxref=GenBank:WP_000542796.1;Name=WP_000542796.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418525.1;locus_tag=AC57_RS02695;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_000542796.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 60919 61644 . - . ID=gene-AC57_RS02690;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=AC57_RS02690;old_locus_tag=AC57_4569 NZ_JJLR01000154.1 Protein Homology CDS 60919 61644 . - 0 ID=cds-WP_001351883.1;Parent=gene-AC57_RS02690;Dbxref=GenBank:WP_001351883.1;Name=WP_001351883.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AC57_RS02690;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_001351883.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 61665 62444 . - . ID=gene-AC57_RS02685;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AC57_RS02685;old_locus_tag=AC57_4570 NZ_JJLR01000154.1 Protein Homology CDS 61665 62444 . - 0 ID=cds-WP_001398152.1;Parent=gene-AC57_RS02685;Dbxref=GenBank:WP_001398152.1;Name=WP_001398152.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AC57_RS02685;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_001398152.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 62534 63550 . - . ID=gene-AC57_RS02680;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=AC57_RS02680;old_locus_tag=AC57_4571 NZ_JJLR01000154.1 Protein Homology CDS 62534 63550 . - 0 ID=cds-WP_000992002.1;Parent=gene-AC57_RS02680;Dbxref=GenBank:WP_000992002.1;Name=WP_000992002.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AC57_RS02680;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_000992002.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 63575 64363 . - . ID=gene-AC57_RS02675;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AC57_RS02675;old_locus_tag=AC57_4572 NZ_JJLR01000154.1 Protein Homology CDS 63575 64363 . - 0 ID=cds-WP_001193408.1;Parent=gene-AC57_RS02675;Dbxref=GenBank:WP_001193408.1;Name=WP_001193408.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418530.1;locus_tag=AC57_RS02675;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001193408.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 64496 64939 . - . ID=gene-AC57_RS02670;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AC57_RS02670;old_locus_tag=AC57_4573 NZ_JJLR01000154.1 Protein Homology CDS 64496 64939 . - 0 ID=cds-WP_001131339.1;Parent=gene-AC57_RS02670;Dbxref=GenBank:WP_001131339.1;Name=WP_001131339.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AC57_RS02670;product=VOC family metalloprotein YjdN;protein_id=WP_001131339.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 65197 65532 . - . ID=gene-AC57_RS02665;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AC57_RS02665;old_locus_tag=AC57_4574 NZ_JJLR01000154.1 Protein Homology CDS 65197 65532 . - 0 ID=cds-WP_001300891.1;Parent=gene-AC57_RS02665;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AC57_RS02665;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 65933 68161 . + . ID=gene-AC57_RS02660;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AC57_RS02660;old_locus_tag=AC57_4575 NZ_JJLR01000154.1 Protein Homology CDS 65933 68161 . + 0 ID=cds-WP_000288603.1;Parent=gene-AC57_RS02660;Dbxref=GenBank:WP_000288603.1;Name=WP_000288603.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AC57_RS02660;product=clamp-binding protein CrfC;protein_id=WP_000288603.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 68158 69036 . + . ID=gene-AC57_RS02655;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AC57_RS02655;old_locus_tag=AC57_4576 NZ_JJLR01000154.1 Protein Homology CDS 68158 69036 . + 0 ID=cds-WP_000169188.1;Parent=gene-AC57_RS02655;Dbxref=GenBank:WP_000169188.1;Name=WP_000169188.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418534.4;locus_tag=AC57_RS02655;product=YjcZ-like family protein;protein_id=WP_000169188.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 69300 70802 . + . ID=gene-AC57_RS02650;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AC57_RS02650;old_locus_tag=AC57_4577 NZ_JJLR01000154.1 Protein Homology CDS 69300 70802 . + 0 ID=cds-WP_001737661.1;Parent=gene-AC57_RS02650;Dbxref=GenBank:WP_001737661.1;Name=WP_001737661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313120.1;locus_tag=AC57_RS02650;product=glycine betaine/L-proline transporter ProP;protein_id=WP_001737661.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 70914 71003 . + . ID=gene-AC57_RS0125545;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AC57_RS0125545 NZ_JJLR01000154.1 Protein Homology CDS 70914 71003 . + 0 ID=cds-WP_000797657.1;Parent=gene-AC57_RS0125545;Dbxref=GenBank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AC57_RS0125545;product=LpxT activity modulator PmrR;protein_id=WP_000797657.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 70979 72079 . - . ID=gene-AC57_RS02645;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AC57_RS02645;old_locus_tag=AC57_4578 NZ_JJLR01000154.1 Protein Homology CDS 70979 72079 . - 0 ID=cds-WP_001051092.1;Parent=gene-AC57_RS02645;Dbxref=GenBank:WP_001051092.1;Name=WP_001051092.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AC57_RS02645;product=two-component system sensor histidine kinase PmrB;protein_id=WP_001051092.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 72080 72748 . - . ID=gene-AC57_RS02640;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AC57_RS02640;old_locus_tag=AC57_4579 NZ_JJLR01000154.1 Protein Homology CDS 72080 72748 . - 0 ID=cds-WP_000697915.1;Parent=gene-AC57_RS02640;Dbxref=GenBank:WP_000697915.1;Name=WP_000697915.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AC57_RS02640;product=two-component system response regulator BasR;protein_id=WP_000697915.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 72745 74388 . - . ID=gene-AC57_RS02635;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AC57_RS02635;old_locus_tag=AC57_4580 NZ_JJLR01000154.1 Protein Homology CDS 72745 74388 . - 0 ID=cds-WP_000919792.1;Parent=gene-AC57_RS02635;Dbxref=GenBank:WP_000919792.1;Name=WP_000919792.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AC57_RS02635;product=phosphoethanolamine transferase EptA;protein_id=WP_000919792.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 74492 75829 . - . ID=gene-AC57_RS02630;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AC57_RS02630;old_locus_tag=AC57_4581 NZ_JJLR01000154.1 Protein Homology CDS 74492 75829 . - 0 ID=cds-WP_000093154.1;Parent=gene-AC57_RS02630;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AC57_RS02630;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 75966 76727 . - . ID=gene-AC57_RS02625;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AC57_RS02625;old_locus_tag=AC57_4582 NZ_JJLR01000154.1 Protein Homology CDS 75966 76727 . - 0 ID=cds-WP_001217060.1;Parent=gene-AC57_RS02625;Dbxref=GenBank:WP_001217060.1;Name=WP_001217060.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418540.1;locus_tag=AC57_RS02625;product=DNA-binding transcriptional activator AdiY;protein_id=WP_001217060.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 77052 79319 . - . ID=gene-AC57_RS02620;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AC57_RS02620;old_locus_tag=AC57_4583 NZ_JJLR01000154.1 Protein Homology CDS 77052 79319 . - 0 ID=cds-WP_001381593.1;Parent=gene-AC57_RS02620;Dbxref=GenBank:WP_001381593.1;Name=WP_001381593.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AC57_RS02620;product=arginine decarboxylase;protein_id=WP_001381593.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 79518 80426 . - . ID=gene-AC57_RS02615;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AC57_RS02615;old_locus_tag=AC57_4584 NZ_JJLR01000154.1 Protein Homology CDS 79518 80426 . - 0 ID=cds-WP_001090758.1;Parent=gene-AC57_RS02615;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AC57_RS02615;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 80709 82064 . + . ID=gene-AC57_RS02610;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AC57_RS02610;old_locus_tag=AC57_4585 NZ_JJLR01000154.1 Protein Homology CDS 80709 82064 . + 0 ID=cds-WP_000986601.1;Parent=gene-AC57_RS02610;Dbxref=GenBank:WP_000986601.1;Name=WP_000986601.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418543.1;locus_tag=AC57_RS02610;product=alpha-galactosidase;protein_id=WP_000986601.1;transl_table=11 NZ_JJLR01000154.1 RefSeq pseudogene 82167 83587 . + . ID=gene-AC57_RS0125555;Name=melB;gbkey=Gene;gene=melB;gene_biotype=pseudogene;locus_tag=AC57_RS0125555;pseudo=true NZ_JJLR01000154.1 Protein Homology CDS 82167 83587 . + 0 ID=cds-AC57_RS0125555;Parent=gene-AC57_RS0125555;Note=frameshifted;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AC57_RS0125555;product=melibiose:sodium transporter MelB;pseudo=true;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 83726 84355 . - . ID=gene-AC57_RS02605;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AC57_RS02605;old_locus_tag=AC57_4587 NZ_JJLR01000154.1 Protein Homology CDS 83726 84355 . - 0 ID=cds-WP_000198752.1;Parent=gene-AC57_RS02605;Dbxref=GenBank:WP_000198752.1;Name=WP_000198752.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313130.1;locus_tag=AC57_RS02605;product=DUF2238 domain-containing protein;protein_id=WP_000198752.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 84478 86124 . - . ID=gene-AC57_RS02600;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AC57_RS02600;old_locus_tag=AC57_4588 NZ_JJLR01000154.1 Protein Homology CDS 84478 86124 . - 0 ID=cds-WP_000066707.1;Parent=gene-AC57_RS02600;Dbxref=GenBank:WP_000066707.1;Name=WP_000066707.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AC57_RS02600;product=class I fumarate hydratase;protein_id=WP_000066707.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 86202 87542 . - . ID=gene-AC57_RS02595;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AC57_RS02595;old_locus_tag=AC57_4589 NZ_JJLR01000154.1 Protein Homology CDS 86202 87542 . - 0 ID=cds-WP_000899522.1;Parent=gene-AC57_RS02595;Dbxref=GenBank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AC57_RS02595;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 88113 88832 . - . ID=gene-AC57_RS02590;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AC57_RS02590;old_locus_tag=AC57_4590 NZ_JJLR01000154.1 Protein Homology CDS 88113 88832 . - 0 ID=cds-WP_000611288.1;Parent=gene-AC57_RS02590;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AC57_RS02590;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 88829 90460 . - . ID=gene-AC57_RS02585;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AC57_RS02585;old_locus_tag=AC57_4591 NZ_JJLR01000154.1 Protein Homology CDS 88829 90460 . - 0 ID=cds-WP_001565376.1;Parent=gene-AC57_RS02585;Dbxref=GenBank:WP_001565376.1;Name=WP_001565376.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AC57_RS02585;product=sensor histidine kinase;protein_id=WP_001565376.1;transl_table=11 NZ_JJLR01000154.1 RefSeq gene 90641 90835 . + . ID=gene-AC57_RS02580;Name=AC57_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS02580;old_locus_tag=AC57_4593 NZ_JJLR01000154.1 Protein Homology CDS 90641 90835 . + 0 ID=cds-WP_032237152.1;Parent=gene-AC57_RS02580;Dbxref=GenBank:WP_032237152.1;Name=WP_032237152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AC57_RS02580;product=(4Fe-4S)-binding protein;protein_id=WP_032237152.1;transl_table=11 NZ_JJLR01000154.1 RefSeq pseudogene 90886 91190 . + . ID=gene-AC57_RS0125565;Name=AC57_RS0125565;end_range=91190,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125565;partial=true;pseudo=true NZ_JJLR01000154.1 Protein Homology CDS 90886 91190 . + 0 ID=cds-AC57_RS0125565;Parent=gene-AC57_RS0125565;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=91190,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS0125565;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000155.1 1 52454 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000155.1 RefSeq region 1 52454 . + . ID=NZ_JJLR01000155.1:1..52454;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000155.1 RefSeq pseudogene 1 559 . + . ID=gene-AC57_RS26245;Name=AC57_RS26245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS26245;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000155.1 Protein Homology CDS 1 559 . + 2 ID=cds-AC57_RS26245;Parent=gene-AC57_RS26245;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS26245;partial=true;product=IS1-like element IS1F family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000155.1 RefSeq pseudogene 574 648 . + . ID=gene-AC57_RS31280;Name=AC57_RS31280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31280;partial=true;pseudo=true;start_range=.,574 NZ_JJLR01000155.1 Protein Homology CDS 574 648 . + 0 ID=cds-AC57_RS31280;Parent=gene-AC57_RS31280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398269.1;locus_tag=AC57_RS31280;partial=true;product=phosphoethanolamine transferase;pseudo=true;start_range=.,574;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 745 2007 . - . ID=gene-AC57_RS02570;Name=AC57_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS02570;old_locus_tag=AC57_4597 NZ_JJLR01000155.1 Protein Homology CDS 745 2007 . - 0 ID=cds-WP_001218861.1-3;Parent=gene-AC57_RS02570;Dbxref=GenBank:WP_001218861.1;Name=WP_001218861.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=AC57_RS02570;product=tyrosine-type recombinase/integrase;protein_id=WP_001218861.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 2205 2280 . - . ID=gene-AC57_RS02565;Name=AC57_RS02565;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS02565;old_locus_tag=AC57_4598 NZ_JJLR01000155.1 tRNAscan-SE tRNA 2205 2280 . - . ID=rna-AC57_RS02565;Parent=gene-AC57_RS02565;anticodon=(pos:complement(2245..2247));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02565;product=tRNA-Phe NZ_JJLR01000155.1 tRNAscan-SE exon 2205 2280 . - . ID=exon-AC57_RS02565-1;Parent=rna-AC57_RS02565;anticodon=(pos:complement(2245..2247));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02565;product=tRNA-Phe NZ_JJLR01000155.1 RefSeq gene 2387 2962 . - . ID=gene-AC57_RS02560;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AC57_RS02560;old_locus_tag=AC57_4599 NZ_JJLR01000155.1 Protein Homology CDS 2387 2962 . - 0 ID=cds-WP_001188520.1;Parent=gene-AC57_RS02560;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AC57_RS02560;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 2999 4696 . - . ID=gene-AC57_RS02555;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AC57_RS02555;old_locus_tag=AC57_4600 NZ_JJLR01000155.1 Protein Homology CDS 2999 4696 . - 0 ID=cds-WP_000068902.1;Parent=gene-AC57_RS02555;Dbxref=GenBank:WP_000068902.1;Name=WP_000068902.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418559.1;locus_tag=AC57_RS02555;product=protein-disulfide reductase DsbD;protein_id=WP_000068902.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 4672 5010 . - . ID=gene-AC57_RS02550;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AC57_RS02550;old_locus_tag=AC57_4601 NZ_JJLR01000155.1 Protein Homology CDS 4672 5010 . - 0 ID=cds-WP_000883400.1;Parent=gene-AC57_RS02550;Dbxref=GenBank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AC57_RS02550;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 5126 6427 . - . ID=gene-AC57_RS02545;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AC57_RS02545;old_locus_tag=AC57_4602 NZ_JJLR01000155.1 Protein Homology CDS 5126 6427 . - 0 ID=cds-WP_000961959.1;Parent=gene-AC57_RS02545;Dbxref=GenBank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AC57_RS02545;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 6545 7981 . - . ID=gene-AC57_RS02540;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AC57_RS02540;old_locus_tag=AC57_4603 NZ_JJLR01000155.1 Protein Homology CDS 6545 7981 . - 0 ID=cds-WP_000069437.1;Parent=gene-AC57_RS02540;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AC57_RS02540;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 8318 8794 . + . ID=gene-AC57_RS02535;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AC57_RS02535;old_locus_tag=AC57_4604 NZ_JJLR01000155.1 Protein Homology CDS 8318 8794 . + 0 ID=cds-WP_001267448.1;Parent=gene-AC57_RS02535;Dbxref=GenBank:WP_001267448.1;Name=WP_001267448.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418564.2;locus_tag=AC57_RS02535;product=FxsA family protein;protein_id=WP_001267448.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 8810 10066 . - . ID=gene-AC57_RS02530;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AC57_RS02530;old_locus_tag=AC57_4605 NZ_JJLR01000155.1 Protein Homology CDS 8810 10066 . - 0 ID=cds-WP_000015852.1;Parent=gene-AC57_RS02530;Dbxref=GenBank:WP_000015852.1;Name=WP_000015852.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313149.1;locus_tag=AC57_RS02530;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015852.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 10342 10635 . + . ID=gene-AC57_RS02525;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AC57_RS02525;old_locus_tag=AC57_4606 NZ_JJLR01000155.1 Protein Homology CDS 10342 10635 . + 0 ID=cds-WP_001026276.1;Parent=gene-AC57_RS02525;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AC57_RS02525;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 10679 12325 . + . ID=gene-AC57_RS02520;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AC57_RS02520;old_locus_tag=AC57_4607 NZ_JJLR01000155.1 Protein Homology CDS 10679 12325 . + 0 ID=cds-WP_000729117.1;Parent=gene-AC57_RS02520;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AC57_RS02520;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 12463 12816 . + . ID=gene-AC57_RS02515;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AC57_RS02515;old_locus_tag=AC57_4608 NZ_JJLR01000155.1 Protein Homology CDS 12463 12816 . + 0 ID=cds-WP_001301120.1;Parent=gene-AC57_RS02515;Dbxref=GenBank:WP_001301120.1;Name=WP_001301120.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AC57_RS02515;product=DUF4156 domain-containing protein;protein_id=WP_001301120.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 13009 13878 . - . ID=gene-AC57_RS02510;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AC57_RS02510;old_locus_tag=AC57_4609 NZ_JJLR01000155.1 Protein Homology CDS 13009 13878 . - 0 ID=cds-WP_001008049.1;Parent=gene-AC57_RS02510;Dbxref=GenBank:WP_001008049.1;Name=WP_001008049.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710010.2;locus_tag=AC57_RS02510;product=YjeJ family protein;protein_id=WP_001008049.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 14273 15301 . - . ID=gene-AC57_RS02505;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AC57_RS02505;old_locus_tag=AC57_4610 NZ_JJLR01000155.1 Protein Homology CDS 14273 15301 . - 0 ID=cds-WP_000940498.1;Parent=gene-AC57_RS02505;Dbxref=GenBank:WP_000940498.1;Name=WP_000940498.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=AC57_RS02505;product=EF-P beta-lysylation protein EpmB;protein_id=WP_000940498.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 15343 15909 . + . ID=gene-AC57_RS02500;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AC57_RS02500;old_locus_tag=AC57_4611 NZ_JJLR01000155.1 Protein Homology CDS 15343 15909 . + 0 ID=cds-WP_000257278.1;Parent=gene-AC57_RS02500;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AC57_RS02500;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 15961 16086 . + . ID=gene-AC57_RS02495;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AC57_RS02495;old_locus_tag=AC57_4612 NZ_JJLR01000155.1 Protein Homology CDS 15961 16086 . + 0 ID=cds-WP_000977757.1;Parent=gene-AC57_RS02495;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AC57_RS02495;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 16197 16343 . + . ID=gene-AC57_RS02490;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AC57_RS02490;old_locus_tag=AC57_4613 NZ_JJLR01000155.1 Protein Homology CDS 16197 16343 . + 0 ID=cds-WP_000239596.1;Parent=gene-AC57_RS02490;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AC57_RS02490;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 16519 16836 . + . ID=gene-AC57_RS02485;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AC57_RS02485;old_locus_tag=AC57_4614 NZ_JJLR01000155.1 Protein Homology CDS 16519 16836 . + 0 ID=cds-WP_000118482.1;Parent=gene-AC57_RS02485;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AC57_RS02485;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 16833 17366 . - . ID=gene-AC57_RS02480;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AC57_RS02480;old_locus_tag=AC57_4615 NZ_JJLR01000155.1 Protein Homology CDS 16833 17366 . - 0 ID=cds-WP_001238363.1;Parent=gene-AC57_RS02480;Dbxref=GenBank:WP_001238363.1;Name=WP_001238363.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AC57_RS02480;product=lipocalin Blc;protein_id=WP_001238363.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 17455 18588 . - . ID=gene-AC57_RS02475;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AC57_RS02475;old_locus_tag=AC57_4616 NZ_JJLR01000155.1 Protein Homology CDS 17455 18588 . - 0 ID=cds-WP_032237529.1;Parent=gene-AC57_RS02475;Dbxref=GenBank:WP_032237529.1;Name=WP_032237529.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AC57_RS02475;product=BlaEC family class C beta-lactamase;protein_id=WP_032237529.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 18653 19012 . - . ID=gene-AC57_RS02470;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AC57_RS02470;old_locus_tag=AC57_4617 NZ_JJLR01000155.1 Protein Homology CDS 18653 19012 . - 0 ID=cds-WP_000609663.1;Parent=gene-AC57_RS02470;Dbxref=GenBank:WP_000609663.1;Name=WP_000609663.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AC57_RS02470;product=fumarate reductase subunit FrdD;protein_id=WP_000609663.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 19023 19418 . - . ID=gene-AC57_RS02465;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AC57_RS02465;old_locus_tag=AC57_4618 NZ_JJLR01000155.1 Protein Homology CDS 19023 19418 . - 0 ID=cds-WP_000208757.1;Parent=gene-AC57_RS02465;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AC57_RS02465;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 19429 20163 . - . ID=gene-AC57_RS02460;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AC57_RS02460;old_locus_tag=AC57_4619 NZ_JJLR01000155.1 Protein Homology CDS 19429 20163 . - 0 ID=cds-WP_000829498.1;Parent=gene-AC57_RS02460;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AC57_RS02460;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 20156 21964 . - . ID=gene-AC57_RS02455;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AC57_RS02455;old_locus_tag=AC57_4620 NZ_JJLR01000155.1 Protein Homology CDS 20156 21964 . - 0 ID=cds-WP_001192984.1;Parent=gene-AC57_RS02455;Dbxref=GenBank:WP_001192984.1;Name=WP_001192984.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AC57_RS02455;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192984.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 22289 23266 . + . ID=gene-AC57_RS02450;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AC57_RS02450;old_locus_tag=AC57_4621 NZ_JJLR01000155.1 Protein Homology CDS 22289 23266 . + 0 ID=cds-WP_000004771.1;Parent=gene-AC57_RS02450;Dbxref=GenBank:WP_000004771.1;Name=WP_000004771.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AC57_RS02450;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004771.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 23485 24987 . + . ID=gene-AC57_RS02445;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AC57_RS02445;old_locus_tag=AC57_4622 NZ_JJLR01000155.1 Protein Homology CDS 23485 24987 . + 0 ID=cds-WP_001336293.1;Parent=gene-AC57_RS02445;Dbxref=GenBank:WP_001336293.1;Name=WP_001336293.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AC57_RS02445;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_001336293.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 25039 25353 . + . ID=gene-AC57_RS02440;Name=yjeN;gbkey=Gene;gene=yjeN;gene_biotype=protein_coding;locus_tag=AC57_RS02440;old_locus_tag=AC57_4623 NZ_JJLR01000155.1 Protein Homology CDS 25039 25353 . + 0 ID=cds-WP_000342867.1;Parent=gene-AC57_RS02440;Dbxref=GenBank:WP_000342867.1;Name=WP_000342867.1;gbkey=CDS;gene=yjeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418581.1;locus_tag=AC57_RS02440;product=protein YjeN;protein_id=WP_000342867.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 25350 25664 . + . ID=gene-AC57_RS02435;Name=yjeO;gbkey=Gene;gene=yjeO;gene_biotype=protein_coding;locus_tag=AC57_RS02435;old_locus_tag=AC57_4624 NZ_JJLR01000155.1 Protein Homology CDS 25350 25664 . + 0 ID=cds-WP_001276180.1;Parent=gene-AC57_RS02435;Dbxref=GenBank:WP_001276180.1;Name=WP_001276180.1;gbkey=CDS;gene=yjeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418582.1;locus_tag=AC57_RS02435;product=YjeO family protein;protein_id=WP_001276180.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 25693 29016 . - . ID=gene-AC57_RS02430;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AC57_RS02430;old_locus_tag=AC57_4625 NZ_JJLR01000155.1 Protein Homology CDS 25693 29016 . - 0 ID=cds-WP_001236847.1;Parent=gene-AC57_RS02430;Dbxref=GenBank:WP_001236847.1;Name=WP_001236847.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=AC57_RS02430;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236847.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 29038 30006 . - . ID=gene-AC57_RS02425;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AC57_RS02425;old_locus_tag=AC57_4626 NZ_JJLR01000155.1 Protein Homology CDS 29038 30006 . - 0 ID=cds-WP_000934920.1;Parent=gene-AC57_RS02425;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AC57_RS02425;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 30103 31155 . - . ID=gene-AC57_RS02420;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AC57_RS02420;old_locus_tag=AC57_4627 NZ_JJLR01000155.1 Protein Homology CDS 30103 31155 . - 0 ID=cds-WP_000041964.1;Parent=gene-AC57_RS02420;Dbxref=GenBank:WP_000041964.1;Name=WP_000041964.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418585.4;locus_tag=AC57_RS02420;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_000041964.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 31250 31795 . + . ID=gene-AC57_RS02415;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AC57_RS02415;old_locus_tag=AC57_4628 NZ_JJLR01000155.1 Protein Homology CDS 31250 31795 . + 0 ID=cds-WP_001295188.1;Parent=gene-AC57_RS02415;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AC57_RS02415;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 32006 32081 . + . ID=gene-AC57_RS02410;Name=AC57_RS02410;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS02410;old_locus_tag=AC57_4629 NZ_JJLR01000155.1 tRNAscan-SE tRNA 32006 32081 . + . ID=rna-AC57_RS02410;Parent=gene-AC57_RS02410;anticodon=(pos:32039..32041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02410;product=tRNA-Gly NZ_JJLR01000155.1 tRNAscan-SE exon 32006 32081 . + . ID=exon-AC57_RS02410-1;Parent=rna-AC57_RS02410;anticodon=(pos:32039..32041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02410;product=tRNA-Gly NZ_JJLR01000155.1 RefSeq gene 32118 32193 . + . ID=gene-AC57_RS02405;Name=AC57_RS02405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS02405;old_locus_tag=AC57_4630 NZ_JJLR01000155.1 tRNAscan-SE tRNA 32118 32193 . + . ID=rna-AC57_RS02405;Parent=gene-AC57_RS02405;anticodon=(pos:32151..32153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02405;product=tRNA-Gly NZ_JJLR01000155.1 tRNAscan-SE exon 32118 32193 . + . ID=exon-AC57_RS02405-1;Parent=rna-AC57_RS02405;anticodon=(pos:32151..32153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02405;product=tRNA-Gly NZ_JJLR01000155.1 RefSeq gene 32229 32304 . + . ID=gene-AC57_RS02400;Name=AC57_RS02400;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS02400;old_locus_tag=AC57_4631 NZ_JJLR01000155.1 tRNAscan-SE tRNA 32229 32304 . + . ID=rna-AC57_RS02400;Parent=gene-AC57_RS02400;anticodon=(pos:32262..32264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02400;product=tRNA-Gly NZ_JJLR01000155.1 tRNAscan-SE exon 32229 32304 . + . ID=exon-AC57_RS02400-1;Parent=rna-AC57_RS02400;anticodon=(pos:32262..32264);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS02400;product=tRNA-Gly NZ_JJLR01000155.1 RefSeq gene 32538 32591 . + . ID=gene-AC57_RS30055;Name=AC57_RS30055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30055 NZ_JJLR01000155.1 Protein Homology CDS 32538 32591 . + 0 ID=cds-WP_010723271.1;Parent=gene-AC57_RS30055;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AC57_RS30055;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 32574 33713 . - . ID=gene-AC57_RS02395;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AC57_RS02395;old_locus_tag=AC57_4632 NZ_JJLR01000155.1 Protein Homology CDS 32574 33713 . - 0 ID=cds-WP_001294219.1;Parent=gene-AC57_RS02395;Dbxref=GenBank:WP_001294219.1;Name=WP_001294219.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418587.1;locus_tag=AC57_RS02395;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294219.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 33712 35259 . + . ID=gene-AC57_RS02390;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AC57_RS02390;old_locus_tag=AC57_4633 NZ_JJLR01000155.1 Protein Homology CDS 33712 35259 . + 0 ID=cds-WP_001351889.1;Parent=gene-AC57_RS02390;Dbxref=GenBank:WP_001351889.1;Name=WP_001351889.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AC57_RS02390;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_001351889.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 35231 35692 . + . ID=gene-AC57_RS02385;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AC57_RS02385;old_locus_tag=AC57_4634 NZ_JJLR01000155.1 Protein Homology CDS 35231 35692 . + 0 ID=cds-WP_000981977.1;Parent=gene-AC57_RS02385;Dbxref=GenBank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AC57_RS02385;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 35711 37045 . + . ID=gene-AC57_RS02380;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AC57_RS02380;old_locus_tag=AC57_4635 NZ_JJLR01000155.1 Protein Homology CDS 35711 37045 . + 0 ID=cds-WP_021575458.1;Parent=gene-AC57_RS02380;Dbxref=GenBank:WP_021575458.1;Name=WP_021575458.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AC57_RS02380;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_021575458.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 37055 38902 . + . ID=gene-AC57_RS02375;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AC57_RS02375;old_locus_tag=AC57_4636 NZ_JJLR01000155.1 Protein Homology CDS 37055 38902 . + 0 ID=cds-WP_001122457.1;Parent=gene-AC57_RS02375;Dbxref=GenBank:WP_001122457.1;Name=WP_001122457.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710035.2;locus_tag=AC57_RS02375;product=DNA mismatch repair endonuclease MutL;protein_id=WP_001122457.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 38895 39845 . + . ID=gene-AC57_RS02370;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AC57_RS02370;old_locus_tag=AC57_4637 NZ_JJLR01000155.1 Protein Homology CDS 38895 39845 . + 0 ID=cds-WP_001280345.1;Parent=gene-AC57_RS02370;Dbxref=GenBank:WP_001280345.1;Name=WP_001280345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418592.1;locus_tag=AC57_RS02370;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280345.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 39931 40239 . + . ID=gene-AC57_RS02365;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AC57_RS02365;old_locus_tag=AC57_4638 NZ_JJLR01000155.1 Protein Homology CDS 39931 40239 . + 0 ID=cds-WP_001051883.1;Parent=gene-AC57_RS02365;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AC57_RS02365;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 40315 41595 . + . ID=gene-AC57_RS02360;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AC57_RS02360;old_locus_tag=AC57_4639 NZ_JJLR01000155.1 Protein Homology CDS 40315 41595 . + 0 ID=cds-WP_000460360.1;Parent=gene-AC57_RS02360;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AC57_RS02360;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 41681 42940 . + . ID=gene-AC57_RS02355;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AC57_RS02355;old_locus_tag=AC57_4640 NZ_JJLR01000155.1 Protein Homology CDS 41681 42940 . + 0 ID=cds-WP_000312488.1;Parent=gene-AC57_RS02355;Dbxref=GenBank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AC57_RS02355;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 42943 43947 . + . ID=gene-AC57_RS02350;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AC57_RS02350;old_locus_tag=AC57_4641 NZ_JJLR01000155.1 Protein Homology CDS 42943 43947 . + 0 ID=cds-WP_001232412.1;Parent=gene-AC57_RS02350;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AC57_RS02350;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 44029 44226 . + . ID=gene-AC57_RS02345;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AC57_RS02345;old_locus_tag=AC57_4642 NZ_JJLR01000155.1 Protein Homology CDS 44029 44226 . + 0 ID=cds-WP_001089295.1;Parent=gene-AC57_RS02345;Dbxref=GenBank:WP_001089295.1;Name=WP_001089295.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AC57_RS02345;product=DUF2065 domain-containing protein;protein_id=WP_001089295.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 44330 45628 . + . ID=gene-AC57_RS02340;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AC57_RS02340;old_locus_tag=AC57_4643 NZ_JJLR01000155.1 Protein Homology CDS 44330 45628 . + 0 ID=cds-WP_000527955.1;Parent=gene-AC57_RS02340;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AC57_RS02340;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 45833 46258 . + . ID=gene-AC57_RS02335;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AC57_RS02335;old_locus_tag=AC57_4644 NZ_JJLR01000155.1 Protein Homology CDS 45833 46258 . + 0 ID=cds-WP_001177644.1;Parent=gene-AC57_RS02335;Dbxref=GenBank:WP_001177644.1;Name=WP_001177644.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AC57_RS02335;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177644.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 46297 48738 . + . ID=gene-AC57_RS02330;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AC57_RS02330;old_locus_tag=AC57_4645 NZ_JJLR01000155.1 Protein Homology CDS 46297 48738 . + 0 ID=cds-WP_000076316.1;Parent=gene-AC57_RS02330;Dbxref=GenBank:WP_000076316.1;Name=WP_000076316.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AC57_RS02330;product=ribonuclease R;protein_id=WP_000076316.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 48918 49649 . + . ID=gene-AC57_RS02325;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AC57_RS02325;old_locus_tag=AC57_4646 NZ_JJLR01000155.1 Protein Homology CDS 48918 49649 . + 0 ID=cds-WP_001293282.1;Parent=gene-AC57_RS02325;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AC57_RS02325;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 49726 50505 . - . ID=gene-AC57_RS02320;Name=AC57_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS02320;old_locus_tag=AC57_4647 NZ_JJLR01000155.1 Protein Homology CDS 49726 50505 . - 0 ID=cds-WP_032279980.1;Parent=gene-AC57_RS02320;Dbxref=GenBank:WP_032279980.1;Name=WP_032279980.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000400401.1;locus_tag=AC57_RS02320;product=IclR family transcriptional regulator;protein_id=WP_032279980.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 50834 51727 . + . ID=gene-AC57_RS02315;Name=AC57_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS02315;old_locus_tag=AC57_4648 NZ_JJLR01000155.1 Protein Homology CDS 50834 51727 . + 0 ID=cds-WP_000842398.1;Parent=gene-AC57_RS02315;Dbxref=GenBank:WP_000842398.1;Name=WP_000842398.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020240475.1;locus_tag=AC57_RS02315;product=dihydrodipicolinate synthase family protein;protein_id=WP_000842398.1;transl_table=11 NZ_JJLR01000155.1 RefSeq gene 51778 52206 . + . ID=gene-AC57_RS0125580;Name=AC57_RS0125580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125580;old_locus_tag=AC57_4649 NZ_JJLR01000155.1 Protein Homology CDS 51778 52206 . + 0 ID=cds-WP_032279981.1;Parent=gene-AC57_RS0125580;Dbxref=GenBank:WP_032279981.1;Name=WP_032279981.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284214.1;locus_tag=AC57_RS0125580;product=MFS transporter;protein_id=WP_032279981.1;transl_table=11 NZ_JJLR01000155.1 RefSeq pseudogene 52219 52454 . + . ID=gene-AC57_RS02310;Name=AC57_RS02310;end_range=52454,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS02310;old_locus_tag=AC57_4650;partial=true;pseudo=true NZ_JJLR01000155.1 Protein Homology CDS 52219 52454 . + 0 ID=cds-AC57_RS02310;Parent=gene-AC57_RS02310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=52454,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS02310;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000156.1 1 68724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000156.1 RefSeq region 1 68724 . + . ID=NZ_JJLR01000156.1:1..68724;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000156.1 RefSeq gene 1 202 . + . ID=gene-AC57_RS02305;Name=AC57_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS02305;old_locus_tag=AC57_4651;partial=true;start_range=.,1 NZ_JJLR01000156.1 Protein Homology CDS 1 202 . + 1 ID=cds-WP_000485788.1;Parent=gene-AC57_RS02305;Dbxref=GenBank:WP_000485788.1;Name=WP_000485788.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS02305;partial=true;product=IS1 family transposase;protein_id=WP_000485788.1;start_range=.,1;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 219 605 . + . ID=gene-AC57_RS02300;Name=AC57_RS02300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS02300;old_locus_tag=AC57_4652;partial=true;pseudo=true;start_range=.,219 NZ_JJLR01000156.1 Protein Homology CDS 219 605 . + 0 ID=cds-AC57_RS02300;Parent=gene-AC57_RS02300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313188.1;locus_tag=AC57_RS02300;partial=true;product=DUF1190 domain-containing protein;pseudo=true;start_range=.,219;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 608 1771 . + . ID=gene-AC57_RS02295;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AC57_RS02295;old_locus_tag=AC57_4653 NZ_JJLR01000156.1 Protein Homology CDS 608 1771 . + 0 ID=cds-WP_000943981.1;Parent=gene-AC57_RS02295;Dbxref=GenBank:WP_000943981.1;Name=WP_000943981.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313189.1;locus_tag=AC57_RS02295;product=glutathionylspermidine synthase family protein;protein_id=WP_000943981.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 1855 3480 . + . ID=gene-AC57_RS02290;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AC57_RS02290;old_locus_tag=AC57_4654 NZ_JJLR01000156.1 Protein Homology CDS 1855 3480 . + 0 ID=cds-WP_032279997.1;Parent=gene-AC57_RS02290;Dbxref=GenBank:WP_032279997.1;Name=WP_032279997.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AC57_RS02290;product=isovaleryl-CoA dehydrogenase;protein_id=WP_032279997.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 3597 3872 . - . ID=gene-AC57_RS02285;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AC57_RS02285;old_locus_tag=AC57_4655 NZ_JJLR01000156.1 Protein Homology CDS 3597 3872 . - 0 ID=cds-WP_000811566.1;Parent=gene-AC57_RS02285;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AC57_RS02285;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 4021 4350 . - . ID=gene-AC57_RS02280;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AC57_RS02280;old_locus_tag=AC57_4656 NZ_JJLR01000156.1 Protein Homology CDS 4021 4350 . - 0 ID=cds-WP_000254633.1;Parent=gene-AC57_RS02280;Dbxref=GenBank:WP_000254633.1;Name=WP_000254633.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418610.4;locus_tag=AC57_RS02280;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254633.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 4532 5281 . + . ID=gene-AC57_RS02275;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AC57_RS02275;old_locus_tag=AC57_4657 NZ_JJLR01000156.1 Protein Homology CDS 4532 5281 . + 0 ID=cds-WP_000569723.1;Parent=gene-AC57_RS02275;Dbxref=GenBank:WP_000569723.1;Name=WP_000569723.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710055.1;locus_tag=AC57_RS02275;product=esterase;protein_id=WP_000569723.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 5278 6033 . - . ID=gene-AC57_RS02270;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AC57_RS02270;old_locus_tag=AC57_4658 NZ_JJLR01000156.1 Protein Homology CDS 5278 6033 . - 0 ID=cds-WP_000133631.1;Parent=gene-AC57_RS02270;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AC57_RS02270;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 6141 7205 . - . ID=gene-AC57_RS02265;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AC57_RS02265;old_locus_tag=AC57_4659 NZ_JJLR01000156.1 Protein Homology CDS 6141 7205 . - 0 ID=cds-WP_001301370.1;Parent=gene-AC57_RS02265;Dbxref=GenBank:WP_001301370.1;Name=WP_001301370.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AC57_RS02265;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001301370.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 7560 8957 . + . ID=gene-AC57_RS02260;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AC57_RS02260;old_locus_tag=AC57_4660 NZ_JJLR01000156.1 Protein Homology CDS 7560 8957 . + 0 ID=cds-WP_001300695.1;Parent=gene-AC57_RS02260;Dbxref=GenBank:WP_001300695.1;Name=WP_001300695.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AC57_RS02260;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001300695.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 8973 9278 . + . ID=gene-AC57_RS02255;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AC57_RS02255;old_locus_tag=AC57_4661 NZ_JJLR01000156.1 Protein Homology CDS 8973 9278 . + 0 ID=cds-WP_000218362.1;Parent=gene-AC57_RS02255;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AC57_RS02255;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 9288 9752 . + . ID=gene-AC57_RS02250;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AC57_RS02250;old_locus_tag=AC57_4662 NZ_JJLR01000156.1 Protein Homology CDS 9288 9752 . + 0 ID=cds-WP_000776510.1;Parent=gene-AC57_RS02250;Dbxref=GenBank:WP_000776510.1;Name=WP_000776510.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313198.1;locus_tag=AC57_RS02250;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776510.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 9766 10416 . + . ID=gene-AC57_RS02245;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AC57_RS02245;old_locus_tag=AC57_4663 NZ_JJLR01000156.1 Protein Homology CDS 9766 10416 . + 0 ID=cds-WP_000056760.1;Parent=gene-AC57_RS02245;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AC57_RS02245;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 10426 11280 . + . ID=gene-AC57_RS02240;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AC57_RS02240;old_locus_tag=AC57_4664 NZ_JJLR01000156.1 Protein Homology CDS 10426 11280 . + 0 ID=cds-WP_000949511.1;Parent=gene-AC57_RS02240;Dbxref=GenBank:WP_000949511.1;Name=WP_000949511.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AC57_RS02240;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949511.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 11280 11966 . + . ID=gene-AC57_RS02235;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AC57_RS02235;old_locus_tag=AC57_4665 NZ_JJLR01000156.1 Protein Homology CDS 11280 11966 . + 0 ID=cds-WP_001170792.1;Parent=gene-AC57_RS02235;Dbxref=GenBank:WP_001170792.1;Name=WP_001170792.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313201.1;locus_tag=AC57_RS02235;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170792.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 12095 12370 . - . ID=gene-AC57_RS02230;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AC57_RS02230;old_locus_tag=AC57_4666 NZ_JJLR01000156.1 Protein Homology CDS 12095 12370 . - 0 ID=cds-WP_000492914.1;Parent=gene-AC57_RS02230;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AC57_RS02230;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 12724 13119 . + . ID=gene-AC57_RS02225;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AC57_RS02225;old_locus_tag=AC57_4667 NZ_JJLR01000156.1 Protein Homology CDS 12724 13119 . + 0 ID=cds-WP_001216676.1;Parent=gene-AC57_RS02225;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AC57_RS02225;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 13126 13440 . + . ID=gene-AC57_RS0125590;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AC57_RS0125590 NZ_JJLR01000156.1 Protein Homology CDS 13126 13440 . + 0 ID=cds-WP_001296681.1;Parent=gene-AC57_RS0125590;Dbxref=GenBank:WP_001296681.1;Name=WP_001296681.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=AC57_RS0125590;product=primosomal replication protein N;protein_id=WP_001296681.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 13445 13672 . + . ID=gene-AC57_RS02220;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AC57_RS02220;old_locus_tag=AC57_4668 NZ_JJLR01000156.1 Protein Homology CDS 13445 13672 . + 0 ID=cds-WP_000135199.1;Parent=gene-AC57_RS02220;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AC57_RS02220;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 13714 14163 . + . ID=gene-AC57_RS02215;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AC57_RS02215;old_locus_tag=AC57_4669 NZ_JJLR01000156.1 Protein Homology CDS 13714 14163 . + 0 ID=cds-WP_001196062.1;Parent=gene-AC57_RS02215;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AC57_RS02215;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 14234 15028 . - . ID=gene-AC57_RS02210;Name=yjfZ;gbkey=Gene;gene=yjfZ;gene_biotype=protein_coding;locus_tag=AC57_RS02210;old_locus_tag=AC57_4670 NZ_JJLR01000156.1 Protein Homology CDS 14234 15028 . - 0 ID=cds-WP_000174715.1;Parent=gene-AC57_RS02210;Dbxref=GenBank:WP_000174715.1;Name=WP_000174715.1;gbkey=CDS;gene=yjfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418625.1;locus_tag=AC57_RS02210;product=DUF2686 family protein;protein_id=WP_000174715.1;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 15295 15609 . + . ID=gene-AC57_RS30370;Name=AC57_RS30370;end_range=15609,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30370;partial=true;pseudo=true;start_range=.,15295 NZ_JJLR01000156.1 Protein Homology CDS 15295 15609 . + 0 ID=cds-AC57_RS30370;Parent=gene-AC57_RS30370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=15609,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AC57_RS30370;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,15295;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 15652 16077 . - . ID=gene-AC57_RS28220;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC57_RS28220;old_locus_tag=AC57_4671;partial=true;pseudo=true;start_range=.,15652 NZ_JJLR01000156.1 Protein Homology CDS 15652 16077 . - 0 ID=cds-AC57_RS28220;Parent=gene-AC57_RS28220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313209.1;locus_tag=AC57_RS28220;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,15652;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 16085 17282 . + . ID=gene-AC57_RS02200;Name=AC57_RS02200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS02200;old_locus_tag=AC57_4672;pseudo=true NZ_JJLR01000156.1 Protein Homology CDS 16085 17282 . + 0 ID=cds-AC57_RS02200;Parent=gene-AC57_RS02200;Note=frameshifted;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AC57_RS02200;product=RNA-guided endonuclease InsQ/TnpB family protein;pseudo=true;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 17326 17433 . + . ID=gene-AC57_RS28225;Name=AC57_RS28225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28225;partial=true;pseudo=true;start_range=.,17326 NZ_JJLR01000156.1 Protein Homology CDS 17326 17433 . + 0 ID=cds-AC57_RS28225;Parent=gene-AC57_RS28225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AC57_RS28225;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,17326;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 17417 18055 . - . ID=gene-AC57_RS02195;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AC57_RS02195;old_locus_tag=AC57_4673 NZ_JJLR01000156.1 Protein Homology CDS 17417 18055 . - 0 ID=cds-WP_001119471.1;Parent=gene-AC57_RS02195;Dbxref=GenBank:WP_001119471.1;Name=WP_001119471.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AC57_RS02195;product=cell division protein YtfB;protein_id=WP_001119471.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 18274 18894 . + . ID=gene-AC57_RS02190;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AC57_RS02190;old_locus_tag=AC57_4674 NZ_JJLR01000156.1 Protein Homology CDS 18274 18894 . + 0 ID=cds-WP_000211225.1;Parent=gene-AC57_RS02190;Dbxref=GenBank:WP_000211225.1;Name=WP_000211225.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AC57_RS02190;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211225.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 19203 20615 . + . ID=gene-AC57_RS02185;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AC57_RS02185;old_locus_tag=AC57_4675 NZ_JJLR01000156.1 Protein Homology CDS 19203 20615 . + 0 ID=cds-WP_000228346.1;Parent=gene-AC57_RS02185;Dbxref=GenBank:WP_000228346.1;Name=WP_000228346.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=AC57_RS02185;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228346.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 20660 21322 . - . ID=gene-AC57_RS02180;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AC57_RS02180;old_locus_tag=AC57_4676 NZ_JJLR01000156.1 Protein Homology CDS 20660 21322 . - 0 ID=cds-WP_000331456.1;Parent=gene-AC57_RS02180;Dbxref=GenBank:WP_000331456.1;Name=WP_000331456.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AC57_RS02180;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 21430 22395 . - . ID=gene-AC57_RS02175;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AC57_RS02175;old_locus_tag=AC57_4677 NZ_JJLR01000156.1 Protein Homology CDS 21430 22395 . - 0 ID=cds-WP_029365184.1;Parent=gene-AC57_RS02175;Dbxref=GenBank:WP_029365184.1;Name=WP_029365184.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313215.2;locus_tag=AC57_RS02175;product=DMT family transporter;protein_id=WP_029365184.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 22503 23363 . - . ID=gene-AC57_RS02170;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AC57_RS02170;old_locus_tag=AC57_4678 NZ_JJLR01000156.1 Protein Homology CDS 22503 23363 . - 0 ID=cds-WP_000560561.1;Parent=gene-AC57_RS02170;Dbxref=GenBank:WP_000560561.1;Name=WP_000560561.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418632.1;locus_tag=AC57_RS02170;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_000560561.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 23452 23832 . + . ID=gene-AC57_RS02165;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AC57_RS02165;old_locus_tag=AC57_4679 NZ_JJLR01000156.1 Protein Homology CDS 23452 23832 . + 0 ID=cds-WP_000084622.1;Parent=gene-AC57_RS02165;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AC57_RS02165;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 23955 25898 . - . ID=gene-AC57_RS0125595;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=pseudogene;locus_tag=AC57_RS0125595;old_locus_tag=AC57_4680;pseudo=true NZ_JJLR01000156.1 Protein Homology CDS 23955 25898 . - 0 ID=cds-AC57_RS0125595;Parent=gene-AC57_RS0125595;Note=internal stop;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418634.1;locus_tag=AC57_RS0125595;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;pseudo=true;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 26088 26828 . + . ID=gene-AC57_RS02160;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AC57_RS02160;old_locus_tag=AC57_4682 NZ_JJLR01000156.1 Protein Homology CDS 26088 26828 . + 0 ID=cds-WP_000886909.1;Parent=gene-AC57_RS02160;Dbxref=GenBank:WP_000886909.1;Name=WP_000886909.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AC57_RS02160;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886909.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 26818 27375 . - . ID=gene-AC57_RS02155;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AC57_RS02155;old_locus_tag=AC57_4683 NZ_JJLR01000156.1 Protein Homology CDS 26818 27375 . - 0 ID=cds-WP_000175289.1;Parent=gene-AC57_RS02155;Dbxref=GenBank:WP_000175289.1;Name=WP_000175289.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=AC57_RS02155;product=YtfJ family protein;protein_id=WP_000175289.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 27700 27906 . + . ID=gene-AC57_RS02150;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AC57_RS02150;old_locus_tag=AC57_4684 NZ_JJLR01000156.1 Protein Homology CDS 27700 27906 . + 0 ID=cds-WP_000689228.1;Parent=gene-AC57_RS02150;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AC57_RS02150;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 27968 29311 . - . ID=gene-AC57_RS02145;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AC57_RS02145;old_locus_tag=AC57_4685 NZ_JJLR01000156.1 Protein Homology CDS 27968 29311 . - 0 ID=cds-WP_000935042.1;Parent=gene-AC57_RS02145;Dbxref=GenBank:WP_000935042.1;Name=WP_000935042.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709980.1;locus_tag=AC57_RS02145;product=hemolysin family protein;protein_id=WP_000935042.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 29634 30272 . - . ID=gene-AC57_RS02140;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AC57_RS02140;old_locus_tag=AC57_4686 NZ_JJLR01000156.1 Protein Homology CDS 29634 30272 . - 0 ID=cds-WP_001295196.1;Parent=gene-AC57_RS02140;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AC57_RS02140;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 30478 32211 . + . ID=gene-AC57_RS02130;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AC57_RS02130;old_locus_tag=AC57_4688 NZ_JJLR01000156.1 Protein Homology CDS 30478 32211 . + 0 ID=cds-WP_001269327.1;Parent=gene-AC57_RS02130;Dbxref=GenBank:WP_001269327.1;Name=WP_001269327.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AC57_RS02130;product=autotransporter assembly complex protein TamA;protein_id=WP_001269327.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 32208 35987 . + . ID=gene-AC57_RS02125;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AC57_RS02125;old_locus_tag=AC57_4689 NZ_JJLR01000156.1 Protein Homology CDS 32208 35987 . + 0 ID=cds-WP_032279682.1;Parent=gene-AC57_RS02125;Dbxref=GenBank:WP_032279682.1;Name=WP_032279682.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313226.1;locus_tag=AC57_RS02125;product=autotransporter assembly complex protein TamB;protein_id=WP_032279682.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 35990 36331 . + . ID=gene-AC57_RS02120;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AC57_RS02120;old_locus_tag=AC57_4690 NZ_JJLR01000156.1 Protein Homology CDS 35990 36331 . + 0 ID=cds-WP_001219160.1;Parent=gene-AC57_RS02120;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AC57_RS02120;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 36543 36794 . + . ID=gene-AC57_RS02115;Name=chpS;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;locus_tag=AC57_RS02115;old_locus_tag=AC57_4691 NZ_JJLR01000156.1 Protein Homology CDS 36543 36794 . + 0 ID=cds-WP_001223208.1;Parent=gene-AC57_RS02115;Dbxref=GenBank:WP_001223208.1;Name=WP_001223208.1;gbkey=CDS;gene=chpS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418645.2;locus_tag=AC57_RS02115;product=type II toxin-antitoxin system antitoxin ChpS;protein_id=WP_001223208.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 36788 37138 . + . ID=gene-AC57_RS02110;Name=chpB;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;locus_tag=AC57_RS02110;old_locus_tag=AC57_4692 NZ_JJLR01000156.1 Protein Homology CDS 36788 37138 . + 0 ID=cds-WP_000239579.1;Parent=gene-AC57_RS02110;Dbxref=GenBank:WP_000239579.1;Name=WP_000239579.1;gbkey=CDS;gene=chpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418646.1;locus_tag=AC57_RS02110;product=endoribonuclease toxin ChpB;protein_id=WP_000239579.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 37218 37748 . - . ID=gene-AC57_RS02105;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AC57_RS02105;old_locus_tag=AC57_4693 NZ_JJLR01000156.1 Protein Homology CDS 37218 37748 . - 0 ID=cds-WP_000055072.1;Parent=gene-AC57_RS02105;Dbxref=GenBank:WP_000055072.1;Name=WP_000055072.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AC57_RS02105;product=inorganic diphosphatase;protein_id=WP_000055072.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 38058 39014 . + . ID=gene-AC57_RS02100;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AC57_RS02100;old_locus_tag=AC57_4694 NZ_JJLR01000156.1 Protein Homology CDS 38058 39014 . + 0 ID=cds-WP_000265933.1;Parent=gene-AC57_RS02100;Dbxref=GenBank:WP_000265933.1;Name=WP_000265933.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=AC57_RS02100;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265933.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 39154 40656 . + . ID=gene-AC57_RS02095;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AC57_RS02095;old_locus_tag=AC57_4695 NZ_JJLR01000156.1 Protein Homology CDS 39154 40656 . + 0 ID=cds-WP_000205784.1;Parent=gene-AC57_RS02095;Dbxref=GenBank:WP_000205784.1;Name=WP_000205784.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AC57_RS02095;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_000205784.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 40670 41692 . + . ID=gene-AC57_RS02090;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AC57_RS02090;old_locus_tag=AC57_4696 NZ_JJLR01000156.1 Protein Homology CDS 40670 41692 . + 0 ID=cds-WP_001295197.1;Parent=gene-AC57_RS02090;Dbxref=GenBank:WP_001295197.1;Name=WP_001295197.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AC57_RS02090;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_001295197.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 41679 42674 . + . ID=gene-AC57_RS02085;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AC57_RS02085;old_locus_tag=AC57_4697 NZ_JJLR01000156.1 Protein Homology CDS 41679 42674 . + 0 ID=cds-WP_000596008.1;Parent=gene-AC57_RS02085;Dbxref=GenBank:WP_000596008.1;Name=WP_000596008.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313235.2;locus_tag=AC57_RS02085;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000596008.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 42707 43705 . - . ID=gene-AC57_RS02080;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AC57_RS02080;old_locus_tag=AC57_4698 NZ_JJLR01000156.1 Protein Homology CDS 42707 43705 . - 0 ID=cds-WP_000853753.1;Parent=gene-AC57_RS02080;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AC57_RS02080;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 43881 45254 . + . ID=gene-AC57_RS02075;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AC57_RS02075;old_locus_tag=AC57_4700 NZ_JJLR01000156.1 Protein Homology CDS 43881 45254 . + 0 ID=cds-WP_001219806.1;Parent=gene-AC57_RS02075;Dbxref=GenBank:WP_001219806.1;Name=WP_001219806.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=AC57_RS02075;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219806.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 45405 45956 . - . ID=gene-AC57_RS02070;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AC57_RS02070;old_locus_tag=AC57_4701 NZ_JJLR01000156.1 Protein Homology CDS 45405 45956 . - 0 ID=cds-WP_000166270.1;Parent=gene-AC57_RS02070;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AC57_RS02070;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 46050 47402 . + . ID=gene-AC57_RS02065;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AC57_RS02065;old_locus_tag=AC57_4702 NZ_JJLR01000156.1 Protein Homology CDS 46050 47402 . + 0 ID=cds-WP_001162171.1;Parent=gene-AC57_RS02065;Dbxref=GenBank:WP_001162171.1;Name=WP_001162171.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AC57_RS02065;product=metalloprotease PmbA;protein_id=WP_001162171.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 47457 47843 . + . ID=gene-AC57_RS02060;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AC57_RS02060;old_locus_tag=AC57_4703 NZ_JJLR01000156.1 Protein Homology CDS 47457 47843 . + 0 ID=cds-WP_001232246.1;Parent=gene-AC57_RS02060;Dbxref=GenBank:WP_001232246.1;Name=WP_001232246.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AC57_RS02060;product=cytochrome b562;protein_id=WP_001232246.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 47888 48352 . - . ID=gene-AC57_RS02055;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AC57_RS02055;old_locus_tag=AC57_4704 NZ_JJLR01000156.1 Protein Homology CDS 47888 48352 . - 0 ID=cds-WP_001106233.1;Parent=gene-AC57_RS02055;Dbxref=GenBank:WP_001106233.1;Name=WP_001106233.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=AC57_RS02055;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106233.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 48511 50649 . - . ID=gene-AC57_RS02050;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AC57_RS02050;old_locus_tag=AC57_4705 NZ_JJLR01000156.1 Protein Homology CDS 48511 50649 . - 0 ID=cds-WP_001472757.1;Parent=gene-AC57_RS02050;Dbxref=GenBank:WP_001472757.1;Name=WP_001472757.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AC57_RS02050;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_001472757.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 51043 52698 . - . ID=gene-AC57_RS02045;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AC57_RS02045;old_locus_tag=AC57_4707 NZ_JJLR01000156.1 Protein Homology CDS 51043 52698 . - 0 ID=cds-WP_032285758.1;Parent=gene-AC57_RS02045;Dbxref=GenBank:WP_032285758.1;Name=WP_032285758.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709962.2;locus_tag=AC57_RS02045;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_032285758.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 52748 54169 . - . ID=gene-AC57_RS02040;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AC57_RS02040;old_locus_tag=AC57_4708 NZ_JJLR01000156.1 Protein Homology CDS 52748 54169 . - 0 ID=cds-WP_001299664.1;Parent=gene-AC57_RS02040;Dbxref=GenBank:WP_001299664.1;Name=WP_001299664.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AC57_RS02040;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 54288 55235 . - . ID=gene-AC57_RS02035;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AC57_RS02035;old_locus_tag=AC57_4709 NZ_JJLR01000156.1 Protein Homology CDS 54288 55235 . - 0 ID=cds-WP_001181324.1;Parent=gene-AC57_RS02035;Dbxref=GenBank:WP_001181324.1;Name=WP_001181324.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AC57_RS02035;product=trehalose operon repressor TreR;protein_id=WP_001181324.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 55420 55473 . + . ID=gene-AC57_RS30060;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AC57_RS30060 NZ_JJLR01000156.1 Protein Homology CDS 55420 55473 . + 0 ID=cds-WP_001387276.1;Parent=gene-AC57_RS30060;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AC57_RS30060;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 55614 58310 . + . ID=gene-AC57_RS02030;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AC57_RS02030;old_locus_tag=AC57_4710 NZ_JJLR01000156.1 Protein Homology CDS 55614 58310 . + 0 ID=cds-WP_000471866.1;Parent=gene-AC57_RS02030;Dbxref=GenBank:WP_000471866.1;Name=WP_000471866.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AC57_RS02030;product=magnesium-translocating P-type ATPase;protein_id=WP_000471866.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 58516 58902 . - . ID=gene-AC57_RS02025;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AC57_RS02025;old_locus_tag=AC57_4711 NZ_JJLR01000156.1 Protein Homology CDS 58516 58902 . - 0 ID=cds-WP_000047539.1;Parent=gene-AC57_RS02025;Dbxref=GenBank:WP_000047539.1;Name=WP_000047539.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AC57_RS02025;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047539.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 58975 59436 . - . ID=gene-AC57_RS02020;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AC57_RS02020;old_locus_tag=AC57_4712 NZ_JJLR01000156.1 Protein Homology CDS 58975 59436 . - 0 ID=cds-WP_000148581.1;Parent=gene-AC57_RS02020;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AC57_RS02020;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 59449 60384 . - . ID=gene-AC57_RS02015;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AC57_RS02015;old_locus_tag=AC57_4713 NZ_JJLR01000156.1 Protein Homology CDS 59449 60384 . - 0 ID=cds-WP_001466209.1;Parent=gene-AC57_RS02015;Dbxref=GenBank:WP_001466209.1;Name=WP_001466209.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AC57_RS02015;product=aspartate carbamoyltransferase;protein_id=WP_001466209.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 60388 60522 . - . ID=gene-AC57_RS0125600;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AC57_RS0125600 NZ_JJLR01000156.1 Protein Homology CDS 60388 60522 . - 0 ID=cds-WP_001296693.1;Parent=gene-AC57_RS0125600;Dbxref=GenBank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AC57_RS0125600;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 60803 61198 . - . ID=gene-AC57_RS02010;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=AC57_RS02010;old_locus_tag=AC57_4715 NZ_JJLR01000156.1 Protein Homology CDS 60803 61198 . - 0 ID=cds-WP_000230273.1;Parent=gene-AC57_RS02010;Dbxref=GenBank:WP_000230273.1;Name=WP_000230273.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313252.1;locus_tag=AC57_RS02010;product=RidA family protein;protein_id=WP_000230273.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 61329 62042 . - . ID=gene-AC57_RS02005;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AC57_RS02005;old_locus_tag=AC57_4716 NZ_JJLR01000156.1 Protein Homology CDS 61329 62042 . - 0 ID=cds-WP_032279685.1;Parent=gene-AC57_RS02005;Dbxref=GenBank:WP_032279685.1;Name=WP_032279685.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313253.1;locus_tag=AC57_RS02005;product=SDR family oxidoreductase;protein_id=WP_032279685.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 62113 62706 . + . ID=gene-AC57_RS02000;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AC57_RS02000;old_locus_tag=AC57_4717 NZ_JJLR01000156.1 Protein Homology CDS 62113 62706 . + 0 ID=cds-WP_000256667.1;Parent=gene-AC57_RS02000;Dbxref=GenBank:WP_000256667.1;Name=WP_000256667.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313255.2;locus_tag=AC57_RS02000;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256667.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 62851 63303 . + . ID=gene-AC57_RS01995;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AC57_RS01995;old_locus_tag=AC57_4719 NZ_JJLR01000156.1 Protein Homology CDS 62851 63303 . + 0 ID=cds-WP_001296694.1;Parent=gene-AC57_RS01995;Dbxref=GenBank:WP_001296694.1;Name=WP_001296694.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AC57_RS01995;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_001296694.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 63426 65021 . + . ID=gene-AC57_RS01990;Name=AC57_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01990;old_locus_tag=AC57_4720 NZ_JJLR01000156.1 Protein Homology CDS 63426 65021 . + 0 ID=cds-WP_032279687.1;Parent=gene-AC57_RS01990;Dbxref=GenBank:WP_032279687.1;Name=WP_032279687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600920.1;locus_tag=AC57_RS01990;product=hypothetical protein;protein_id=WP_032279687.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 65078 66082 . - . ID=gene-AC57_RS01985;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AC57_RS01985;old_locus_tag=AC57_4721 NZ_JJLR01000156.1 Protein Homology CDS 65078 66082 . - 0 ID=cds-WP_000012944.1;Parent=gene-AC57_RS01985;Dbxref=GenBank:WP_000012944.1;Name=WP_000012944.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=AC57_RS01985;product=ornithine carbamoyltransferase;protein_id=WP_000012944.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 66244 66660 . + . ID=gene-AC57_RS01980;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AC57_RS01980;old_locus_tag=AC57_4722 NZ_JJLR01000156.1 Protein Homology CDS 66244 66660 . + 0 ID=cds-WP_000002953.1;Parent=gene-AC57_RS01980;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AC57_RS01980;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JJLR01000156.1 RefSeq gene 66706 67209 . - . ID=gene-AC57_RS01975;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AC57_RS01975;old_locus_tag=AC57_4723 NZ_JJLR01000156.1 Protein Homology CDS 66706 67209 . - 0 ID=cds-WP_001059398.1;Parent=gene-AC57_RS01975;Dbxref=GenBank:WP_001059398.1;Name=WP_001059398.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=AC57_RS01975;product=GNAT family N-acetyltransferase;protein_id=WP_001059398.1;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 67402 68082 . + . ID=gene-AC57_RS01970;Name=AC57_RS01970;end_range=68082,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01970;old_locus_tag=AC57_4724;partial=true;pseudo=true NZ_JJLR01000156.1 Protein Homology CDS 67402 68082 . + 0 ID=cds-AC57_RS01970;Parent=gene-AC57_RS01970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=68082,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709944.2;locus_tag=AC57_RS01970;partial=true;product=DUF898 family protein;pseudo=true;transl_table=11 NZ_JJLR01000156.1 RefSeq pseudogene 68134 68724 . + . ID=gene-AC57_RS01965;Name=AC57_RS01965;end_range=68724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01965;old_locus_tag=AC57_4725;partial=true;pseudo=true NZ_JJLR01000156.1 Protein Homology CDS 68134 68724 . + 0 ID=cds-AC57_RS01965;Parent=gene-AC57_RS01965;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=68724,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS01965;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000157.1 1 50275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000157.1 RefSeq region 1 50275 . + . ID=NZ_JJLR01000157.1:1..50275;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000157.1 RefSeq gene 53 750 . + . ID=gene-AC57_RS0125610;Name=AC57_RS0125610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125610;old_locus_tag=AC57_4726 NZ_JJLR01000157.1 Protein Homology CDS 53 302 . + 0 ID=cds-WP_095033700.1;Parent=gene-AC57_RS0125610;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC57_RS0125610;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JJLR01000157.1 Protein Homology CDS 302 750 . + 2 ID=cds-WP_095033700.1;Parent=gene-AC57_RS0125610;Dbxref=GenBank:WP_095033700.1;Name=WP_095033700.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC57_RS0125610;product=IS1-like element IS1B family transposase;protein_id=WP_095033700.1;transl_table=11 NZ_JJLR01000157.1 RefSeq pseudogene 770 1294 . + . ID=gene-AC57_RS0125615;Name=AC57_RS0125615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125615;old_locus_tag=AC57_4727;partial=true;pseudo=true;start_range=.,770 NZ_JJLR01000157.1 Protein Homology CDS 770 1294 . + 0 ID=cds-AC57_RS0125615;Parent=gene-AC57_RS0125615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313261.1;locus_tag=AC57_RS0125615;partial=true;product=DUF898 family protein;pseudo=true;start_range=.,770;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 1348 4203 . - . ID=gene-AC57_RS01960;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AC57_RS01960;old_locus_tag=AC57_4728 NZ_JJLR01000157.1 Protein Homology CDS 1348 4203 . - 0 ID=cds-WP_032285761.1;Parent=gene-AC57_RS01960;Dbxref=GenBank:WP_032285761.1;Name=WP_032285761.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AC57_RS01960;product=valine--tRNA ligase;protein_id=WP_032285761.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 4203 4646 . - . ID=gene-AC57_RS01955;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AC57_RS01955;old_locus_tag=AC57_4729 NZ_JJLR01000157.1 Protein Homology CDS 4203 4646 . - 0 ID=cds-WP_032279714.1;Parent=gene-AC57_RS01955;Dbxref=GenBank:WP_032279714.1;Name=WP_032279714.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AC57_RS01955;product=DNA polymerase III subunit chi;protein_id=WP_032279714.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 5000 6511 . - . ID=gene-AC57_RS01950;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AC57_RS01950;old_locus_tag=AC57_4730 NZ_JJLR01000157.1 Protein Homology CDS 5000 6511 . - 0 ID=cds-WP_000397144.1;Parent=gene-AC57_RS01950;Dbxref=GenBank:WP_000397144.1;Name=WP_000397144.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AC57_RS01950;product=leucyl aminopeptidase;protein_id=WP_000397144.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 6665 6715 . + . ID=gene-AC57_RS30590;Name=AC57_RS30590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30590 NZ_JJLR01000157.1 Protein Homology CDS 6665 6715 . + 0 ID=cds-WP_212976467.1;Parent=gene-AC57_RS30590;Dbxref=GenBank:WP_212976467.1;Name=WP_212976467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AC57_RS30590;product=hypothetical protein;protein_id=WP_212976467.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 6778 7878 . + . ID=gene-AC57_RS01945;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AC57_RS01945;old_locus_tag=AC57_4732 NZ_JJLR01000157.1 Protein Homology CDS 6778 7878 . + 0 ID=cds-WP_000584114.1;Parent=gene-AC57_RS01945;Dbxref=GenBank:WP_000584114.1;Name=WP_000584114.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AC57_RS01945;product=LPS export ABC transporter permease LptF;protein_id=WP_000584114.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 7878 8960 . + . ID=gene-AC57_RS01940;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AC57_RS01940;old_locus_tag=AC57_4733 NZ_JJLR01000157.1 Protein Homology CDS 7878 8960 . + 0 ID=cds-WP_001295681.1;Parent=gene-AC57_RS01940;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AC57_RS01940;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 9121 10623 . - . ID=gene-AC57_RS01935;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AC57_RS01935;old_locus_tag=AC57_4734 NZ_JJLR01000157.1 Protein Homology CDS 9121 10623 . - 0 ID=cds-WP_032279715.1;Parent=gene-AC57_RS01935;Dbxref=GenBank:WP_032279715.1;Name=WP_032279715.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313267.1;locus_tag=AC57_RS01935;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_032279715.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 10701 11699 . - . ID=gene-AC57_RS01930;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=AC57_RS01930;old_locus_tag=AC57_4735 NZ_JJLR01000157.1 Protein Homology CDS 10701 11699 . - 0 ID=cds-WP_001297569.1;Parent=gene-AC57_RS01930;Dbxref=GenBank:WP_001297569.1;Name=WP_001297569.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418685.1;locus_tag=AC57_RS01930;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001297569.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 11766 13085 . - . ID=gene-AC57_RS01925;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=AC57_RS01925;old_locus_tag=AC57_4736 NZ_JJLR01000157.1 Protein Homology CDS 11766 13085 . - 0 ID=cds-WP_001128336.1;Parent=gene-AC57_RS01925;Dbxref=GenBank:WP_001128336.1;Name=WP_001128336.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418686.1;locus_tag=AC57_RS01925;product=gnt-II system L-idonate transporter;protein_id=WP_001128336.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 13148 13912 . - . ID=gene-AC57_RS01920;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AC57_RS01920;old_locus_tag=AC57_4737 NZ_JJLR01000157.1 Protein Homology CDS 13148 13912 . - 0 ID=cds-WP_000998695.1;Parent=gene-AC57_RS01920;Dbxref=GenBank:WP_000998695.1;Name=WP_000998695.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AC57_RS01920;product=gluconate 5-dehydrogenase;protein_id=WP_000998695.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 13936 14967 . - . ID=gene-AC57_RS01915;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=AC57_RS01915;old_locus_tag=AC57_4738 NZ_JJLR01000157.1 Protein Homology CDS 13936 14967 . - 0 ID=cds-WP_001197411.1;Parent=gene-AC57_RS01915;Dbxref=GenBank:WP_001197411.1;Name=WP_001197411.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418688.1;locus_tag=AC57_RS01915;product=L-idonate 5-dehydrogenase;protein_id=WP_001197411.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 15184 15747 . + . ID=gene-AC57_RS01910;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=AC57_RS01910;old_locus_tag=AC57_4739 NZ_JJLR01000157.1 Protein Homology CDS 15184 15747 . + 0 ID=cds-WP_000896741.1;Parent=gene-AC57_RS01910;Dbxref=GenBank:WP_000896741.1;Name=WP_000896741.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418689.1;locus_tag=AC57_RS01910;product=gluconokinase;protein_id=WP_000896741.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 15751 16770 . - . ID=gene-AC57_RS01905;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AC57_RS01905;old_locus_tag=AC57_4740 NZ_JJLR01000157.1 Protein Homology CDS 15751 16770 . - 0 ID=cds-WP_000061766.1;Parent=gene-AC57_RS01905;Dbxref=GenBank:WP_000061766.1;Name=WP_000061766.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AC57_RS01905;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000061766.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 16966 17050 . + . ID=gene-AC57_RS01900;Name=AC57_RS01900;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01900;old_locus_tag=AC57_4742 NZ_JJLR01000157.1 tRNAscan-SE tRNA 16966 17050 . + . ID=rna-AC57_RS01900;Parent=gene-AC57_RS01900;anticodon=(pos:17000..17002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01900;product=tRNA-Leu NZ_JJLR01000157.1 tRNAscan-SE exon 16966 17050 . + . ID=exon-AC57_RS01900-1;Parent=rna-AC57_RS01900;anticodon=(pos:17000..17002);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01900;product=tRNA-Leu NZ_JJLR01000157.1 RefSeq gene 17249 18511 . + . ID=gene-AC57_RS01895;Name=AC57_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01895;old_locus_tag=AC57_4743 NZ_JJLR01000157.1 Protein Homology CDS 17249 18511 . + 0 ID=cds-WP_032267573.1;Parent=gene-AC57_RS01895;Dbxref=GenBank:WP_032267573.1;Name=WP_032267573.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178403.1;locus_tag=AC57_RS01895;product=tyrosine-type recombinase/integrase;protein_id=WP_032267573.1;transl_table=11 NZ_JJLR01000157.1 RefSeq pseudogene 18847 19888 . + . ID=gene-AC57_RS01890;Name=AC57_RS01890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01890;old_locus_tag=AC57_4744;pseudo=true NZ_JJLR01000157.1 Protein Homology CDS 18847 19888 . + 0 ID=cds-AC57_RS01890;Parent=gene-AC57_RS01890;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014543172.1;locus_tag=AC57_RS01890;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 19923 20408 . - . ID=gene-AC57_RS30375;Name=AC57_RS30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30375;old_locus_tag=AC57_4745 NZ_JJLR01000157.1 GeneMarkS-2+ CDS 19923 20408 . - 0 ID=cds-WP_032279716.1;Parent=gene-AC57_RS30375;Dbxref=GenBank:WP_032279716.1;Name=WP_032279716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30375;product=hypothetical protein;protein_id=WP_032279716.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 20493 23363 . - . ID=gene-AC57_RS01880;Name=AC57_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01880;old_locus_tag=AC57_4746 NZ_JJLR01000157.1 Protein Homology CDS 20493 23363 . - 0 ID=cds-WP_032267576.1;Parent=gene-AC57_RS01880;Dbxref=GenBank:WP_032267576.1;Name=WP_032267576.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001413875.1;locus_tag=AC57_RS01880;product=DEAD/DEAH box helicase;protein_id=WP_032267576.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 23360 24976 . - . ID=gene-AC57_RS01875;Name=AC57_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01875;old_locus_tag=AC57_4747 NZ_JJLR01000157.1 Protein Homology CDS 23360 24976 . - 0 ID=cds-WP_032267577.1;Parent=gene-AC57_RS01875;Dbxref=GenBank:WP_032267577.1;Name=WP_032267577.1;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000105162.1;locus_tag=AC57_RS01875;product=site-specific DNA-methyltransferase;protein_id=WP_032267577.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 24987 27374 . - . ID=gene-AC57_RS01870;Name=AC57_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01870;old_locus_tag=AC57_4748 NZ_JJLR01000157.1 Protein Homology CDS 24987 27374 . - 0 ID=cds-WP_032267578.1;Parent=gene-AC57_RS01870;Dbxref=GenBank:WP_032267578.1;Name=WP_032267578.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501432.1;locus_tag=AC57_RS01870;product=S8 family peptidase;protein_id=WP_032267578.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 27384 28364 . - . ID=gene-AC57_RS01865;Name=AC57_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01865;old_locus_tag=AC57_4749 NZ_JJLR01000157.1 Protein Homology CDS 27384 28364 . - 0 ID=cds-WP_032267579.1;Parent=gene-AC57_RS01865;Dbxref=GenBank:WP_032267579.1;Name=WP_032267579.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273465.1;locus_tag=AC57_RS01865;product=AAA family ATPase;protein_id=WP_032267579.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 28390 31239 . - . ID=gene-AC57_RS01860;Name=AC57_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01860;old_locus_tag=AC57_4750 NZ_JJLR01000157.1 Protein Homology CDS 28390 31239 . - 0 ID=cds-WP_071999905.1;Parent=gene-AC57_RS01860;Dbxref=GenBank:WP_071999905.1;Name=WP_071999905.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000286651.1;locus_tag=AC57_RS01860;product=SNF2-related protein;protein_id=WP_071999905.1;transl_table=11 NZ_JJLR01000157.1 RefSeq pseudogene 31463 31849 . - . ID=gene-AC57_RS0125620;Name=AC57_RS0125620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125620;pseudo=true NZ_JJLR01000157.1 Protein Homology CDS 31463 31849 . - 0 ID=cds-AC57_RS0125620;Parent=gene-AC57_RS0125620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616552.1;locus_tag=AC57_RS0125620;product=putative zinc ribbon protein;pseudo=true;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 32053 32706 . - . ID=gene-AC57_RS01855;Name=AC57_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01855;old_locus_tag=AC57_4753 NZ_JJLR01000157.1 Protein Homology CDS 32053 32706 . - 0 ID=cds-WP_032267580.1;Parent=gene-AC57_RS01855;Dbxref=GenBank:WP_032267580.1;Name=WP_032267580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616553.1;locus_tag=AC57_RS01855;product=inovirus Gp2 family protein;protein_id=WP_032267580.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 33132 33719 . - . ID=gene-AC57_RS01850;Name=AC57_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01850;old_locus_tag=AC57_4754 NZ_JJLR01000157.1 Protein Homology CDS 33132 33719 . - 0 ID=cds-WP_032267581.1;Parent=gene-AC57_RS01850;Dbxref=GenBank:WP_032267581.1;Name=WP_032267581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001616554.1;locus_tag=AC57_RS01850;product=hypothetical protein;protein_id=WP_032267581.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 33813 34019 . - . ID=gene-AC57_RS01845;Name=AC57_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01845;old_locus_tag=AC57_4755 NZ_JJLR01000157.1 Protein Homology CDS 33813 34019 . - 0 ID=cds-WP_032267582.1;Parent=gene-AC57_RS01845;Dbxref=GenBank:WP_032267582.1;Name=WP_032267582.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213331.1;locus_tag=AC57_RS01845;product=helix-turn-helix transcriptional regulator;protein_id=WP_032267582.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 34477 35544 . + . ID=gene-AC57_RS01840;Name=AC57_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01840;old_locus_tag=AC57_4756 NZ_JJLR01000157.1 Protein Homology CDS 34477 35544 . + 0 ID=cds-WP_032279717.1;Parent=gene-AC57_RS01840;Dbxref=GenBank:WP_032279717.1;Name=WP_032279717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585287.1;locus_tag=AC57_RS01840;product=hypothetical protein;protein_id=WP_032279717.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 35667 36542 . + . ID=gene-AC57_RS01835;Name=AC57_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01835;old_locus_tag=AC57_4757 NZ_JJLR01000157.1 Protein Homology CDS 35667 36542 . + 0 ID=cds-WP_032267584.1;Parent=gene-AC57_RS01835;Dbxref=GenBank:WP_032267584.1;Name=WP_032267584.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=AC57_RS01835;product=GTPase family protein;protein_id=WP_032267584.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 36803 37516 . + . ID=gene-AC57_RS01830;Name=AC57_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01830;old_locus_tag=AC57_4758 NZ_JJLR01000157.1 Protein Homology CDS 36803 37516 . + 0 ID=cds-WP_000075763.1;Parent=gene-AC57_RS01830;Dbxref=GenBank:WP_000075763.1;Name=WP_000075763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000075759.1;locus_tag=AC57_RS01830;product=WYL domain-containing protein;protein_id=WP_000075763.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 37513 38148 . + . ID=gene-AC57_RS01825;Name=AC57_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01825;old_locus_tag=AC57_4759 NZ_JJLR01000157.1 Protein Homology CDS 37513 38148 . + 0 ID=cds-WP_032267586.1;Parent=gene-AC57_RS01825;Dbxref=GenBank:WP_032267586.1;Name=WP_032267586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772023.1;locus_tag=AC57_RS01825;product=hypothetical protein;protein_id=WP_032267586.1;transl_table=11 NZ_JJLR01000157.1 RefSeq pseudogene 38187 38641 . + . ID=gene-AC57_RS0125625;Name=AC57_RS0125625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125625;old_locus_tag=AC57_4760;pseudo=true NZ_JJLR01000157.1 Protein Homology CDS 38187 38641 . + 0 ID=cds-AC57_RS0125625;Parent=gene-AC57_RS0125625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737910.1;locus_tag=AC57_RS0125625;product=YfjS/YafY family lipoprotein;pseudo=true;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 38638 38772 . + . ID=gene-AC57_RS31085;Name=AC57_RS31085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31085;old_locus_tag=AC57_4762 NZ_JJLR01000157.1 GeneMarkS-2+ CDS 38638 38772 . + 0 ID=cds-WP_255380262.1;Parent=gene-AC57_RS31085;Dbxref=GenBank:WP_255380262.1;Name=WP_255380262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS31085;product=hypothetical protein;protein_id=WP_255380262.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 38811 39098 . + . ID=gene-AC57_RS30895;Name=AC57_RS30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30895;old_locus_tag=AC57_4763 NZ_JJLR01000157.1 GeneMarkS-2+ CDS 38811 39098 . + 0 ID=cds-WP_235839820.1;Parent=gene-AC57_RS30895;Dbxref=GenBank:WP_235839820.1;Name=WP_235839820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30895;product=hypothetical protein;protein_id=WP_235839820.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 39165 39704 . + . ID=gene-AC57_RS01820;Name=AC57_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01820;old_locus_tag=AC57_4764 NZ_JJLR01000157.1 Protein Homology CDS 39165 39704 . + 0 ID=cds-WP_032279718.1;Parent=gene-AC57_RS01820;Dbxref=GenBank:WP_032279718.1;Name=WP_032279718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104022.1;locus_tag=AC57_RS01820;product=DUF4339 domain-containing protein;protein_id=WP_032279718.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 39799 40272 . + . ID=gene-AC57_RS01815;Name=AC57_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01815;old_locus_tag=AC57_4765 NZ_JJLR01000157.1 Protein Homology CDS 39799 40272 . + 0 ID=cds-WP_032279719.1;Parent=gene-AC57_RS01815;Dbxref=GenBank:WP_032279719.1;Name=WP_032279719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001239769.1;locus_tag=AC57_RS01815;product=hypothetical protein;protein_id=WP_032279719.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 40393 41214 . + . ID=gene-AC57_RS01810;Name=AC57_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01810;old_locus_tag=AC57_4766 NZ_JJLR01000157.1 Protein Homology CDS 40393 41214 . + 0 ID=cds-WP_032267590.1;Parent=gene-AC57_RS01810;Dbxref=GenBank:WP_032267590.1;Name=WP_032267590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001546956.1;locus_tag=AC57_RS01810;product=DUF932 domain-containing protein;protein_id=WP_032267590.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 41245 41688 . + . ID=gene-AC57_RS01805;Name=AC57_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01805;old_locus_tag=AC57_4767 NZ_JJLR01000157.1 Protein Homology CDS 41245 41688 . + 0 ID=cds-WP_032279720.1;Parent=gene-AC57_RS01805;Dbxref=GenBank:WP_032279720.1;Name=WP_032279720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128347.1;locus_tag=AC57_RS01805;product=antirestriction protein;protein_id=WP_032279720.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 41701 42243 . + . ID=gene-AC57_RS01800;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AC57_RS01800;old_locus_tag=AC57_4768 NZ_JJLR01000157.1 Protein Homology CDS 41701 42243 . + 0 ID=cds-WP_032267592.1;Parent=gene-AC57_RS01800;Dbxref=GenBank:WP_032267592.1;Name=WP_032267592.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694582.1;locus_tag=AC57_RS01800;product=RadC family protein;protein_id=WP_032267592.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 42254 42595 . + . ID=gene-AC57_RS01795;Name=AC57_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01795;old_locus_tag=AC57_4769 NZ_JJLR01000157.1 Protein Homology CDS 42254 42595 . + 0 ID=cds-WP_032267593.1;Parent=gene-AC57_RS01795;Dbxref=GenBank:WP_032267593.1;Name=WP_032267593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694581.1;locus_tag=AC57_RS01795;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_032267593.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 42616 42957 . + . ID=gene-AC57_RS01790;Name=AC57_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01790;old_locus_tag=AC57_4770 NZ_JJLR01000157.1 Protein Homology CDS 42616 42957 . + 0 ID=cds-WP_032267594.1;Parent=gene-AC57_RS01790;Dbxref=GenBank:WP_032267594.1;Name=WP_032267594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004108750.1;locus_tag=AC57_RS01790;product=TA system toxin CbtA family protein;protein_id=WP_032267594.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 43208 44215 . + . ID=gene-AC57_RS01785;Name=AC57_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01785;old_locus_tag=AC57_4771 NZ_JJLR01000157.1 Protein Homology CDS 43208 44215 . + 0 ID=cds-WP_032267595.1;Parent=gene-AC57_RS01785;Dbxref=GenBank:WP_032267595.1;Name=WP_032267595.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528273.1;locus_tag=AC57_RS01785;product=restriction endonuclease;protein_id=WP_032267595.1;transl_table=11 NZ_JJLR01000157.1 RefSeq pseudogene 44878 45027 . - . ID=gene-AC57_RS30900;Name=AC57_RS30900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30900;partial=true;pseudo=true;start_range=.,44878 NZ_JJLR01000157.1 Protein Homology CDS 44878 45027 . - 0 ID=cds-AC57_RS30900;Parent=gene-AC57_RS30900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_080685909.1;locus_tag=AC57_RS30900;partial=true;product=phosphorothioated DNA-binding restriction endonuclease;pseudo=true;start_range=.,44878;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 45164 45814 . + . ID=gene-AC57_RS01775;Name=AC57_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01775;old_locus_tag=AC57_4774 NZ_JJLR01000157.1 Protein Homology CDS 45164 45814 . + 0 ID=cds-WP_001037966.1;Parent=gene-AC57_RS01775;Dbxref=GenBank:WP_001037966.1;Name=WP_001037966.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586610.1;locus_tag=AC57_RS01775;product=HNH endonuclease;protein_id=WP_001037966.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 45814 45903 . + . ID=gene-AC57_RS31285;Name=AC57_RS31285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31285 NZ_JJLR01000157.1 Protein Homology CDS 45814 45903 . + 0 ID=cds-WP_418267963.1;Parent=gene-AC57_RS31285;Dbxref=GenBank:WP_418267963.1;Name=WP_418267963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051216.1;locus_tag=AC57_RS31285;product=hypothetical protein;protein_id=WP_418267963.1;transl_table=11 NZ_JJLR01000157.1 RefSeq pseudogene 46236 46802 . - . ID=gene-AC57_RS31290;Name=AC57_RS31290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31290;partial=true;pseudo=true;start_range=.,46236 NZ_JJLR01000157.1 Protein Homology CDS 46236 46802 . - 0 ID=cds-AC57_RS31290;Parent=gene-AC57_RS31290;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015585.6;locus_tag=AC57_RS31290;partial=true;product=sialate O-acetylesterase;pseudo=true;start_range=.,46236;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 46867 47973 . - . ID=gene-AC57_RS01765;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=AC57_RS01765;old_locus_tag=AC57_4776 NZ_JJLR01000157.1 Protein Homology CDS 46867 47973 . - 0 ID=cds-WP_001353974.1;Parent=gene-AC57_RS01765;Dbxref=GenBank:WP_001353974.1;Name=WP_001353974.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AC57_RS01765;product=N-acetylneuraminate epimerase;protein_id=WP_001353974.1;transl_table=11 NZ_JJLR01000157.1 RefSeq gene 47993 48709 . - . ID=gene-AC57_RS01760;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AC57_RS01760;old_locus_tag=AC57_4777 NZ_JJLR01000157.1 Protein Homology CDS 47993 48709 . - 0 ID=cds-WP_001360088.1;Parent=gene-AC57_RS01760;Dbxref=GenBank:WP_001360088.1;Name=WP_001360088.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AC57_RS01760;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001360088.1;transl_table=11 NZ_JJLR01000157.1 RefSeq pseudogene 49685 50275 . + . ID=gene-AC57_RS01755;Name=AC57_RS01755;end_range=50275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01755;old_locus_tag=AC57_4778;partial=true;pseudo=true NZ_JJLR01000157.1 Protein Homology CDS 49685 50275 . + 0 ID=cds-AC57_RS01755;Parent=gene-AC57_RS01755;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=50275,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS01755;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000158.1 1 22108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000158.1 RefSeq region 1 22108 . + . ID=NZ_JJLR01000158.1:1..22108;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000158.1 RefSeq gene 1 229 . + . ID=gene-AC57_RS01750;Name=AC57_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01750;old_locus_tag=AC57_4779;partial=true;start_range=.,1 NZ_JJLR01000158.1 Protein Homology CDS 1 229 . + 1 ID=cds-WP_001395900.1-2;Parent=gene-AC57_RS01750;Dbxref=GenBank:WP_001395900.1;Name=WP_001395900.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS01750;partial=true;product=IS1 family transposase;protein_id=WP_001395900.1;start_range=.,1;transl_table=11 NZ_JJLR01000158.1 RefSeq pseudogene 246 635 . + . ID=gene-AC57_RS01745;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=pseudogene;locus_tag=AC57_RS01745;old_locus_tag=AC57_4780;partial=true;pseudo=true;start_range=.,246 NZ_JJLR01000158.1 Protein Homology CDS 246 635 . + 0 ID=cds-AC57_RS01745;Parent=gene-AC57_RS01745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=AC57_RS01745;partial=true;product=type 1 fimbria D-mannose specific adhesin FimH;pseudo=true;start_range=.,246;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 808 2151 . - . ID=gene-AC57_RS01740;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AC57_RS01740;old_locus_tag=AC57_4781 NZ_JJLR01000158.1 Protein Homology CDS 808 2151 . - 0 ID=cds-WP_000558251.1;Parent=gene-AC57_RS01740;Dbxref=GenBank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AC57_RS01740;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 2491 3675 . + . ID=gene-AC57_RS01735;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AC57_RS01735;old_locus_tag=AC57_4782 NZ_JJLR01000158.1 Protein Homology CDS 2491 3675 . + 0 ID=cds-WP_000438582.1;Parent=gene-AC57_RS01735;Dbxref=GenBank:WP_000438582.1;Name=WP_000438582.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AC57_RS01735;product=mannonate dehydratase;protein_id=WP_000438582.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 3756 5216 . + . ID=gene-AC57_RS01730;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AC57_RS01730;old_locus_tag=AC57_4783 NZ_JJLR01000158.1 Protein Homology CDS 3756 5216 . + 0 ID=cds-WP_000208194.1;Parent=gene-AC57_RS01730;Dbxref=GenBank:WP_000208194.1;Name=WP_000208194.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AC57_RS01730;product=fructuronate reductase;protein_id=WP_000208194.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 5431 6204 . + . ID=gene-AC57_RS01720;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AC57_RS01720;old_locus_tag=AC57_4785 NZ_JJLR01000158.1 Protein Homology CDS 5431 6204 . + 0 ID=cds-WP_032279967.1;Parent=gene-AC57_RS01720;Dbxref=GenBank:WP_032279967.1;Name=WP_032279967.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833692.1;locus_tag=AC57_RS01720;product=Uxu operon transcriptional regulator;protein_id=WP_032279967.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 6345 7175 . - . ID=gene-AC57_RS01715;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AC57_RS01715;old_locus_tag=AC57_4786 NZ_JJLR01000158.1 Protein Homology CDS 6345 7175 . - 0 ID=cds-WP_000062589.1;Parent=gene-AC57_RS01715;Dbxref=GenBank:WP_000062589.1;Name=WP_000062589.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313311.3;locus_tag=AC57_RS01715;product=DUF2686 family protein;protein_id=WP_000062589.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 7462 7530 . + . ID=gene-AC57_RS31295;Name=AC57_RS31295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31295 NZ_JJLR01000158.1 Protein Homology CDS 7462 7530 . + 0 ID=cds-WP_418267939.1;Parent=gene-AC57_RS31295;Dbxref=GenBank:WP_418267939.1;Name=WP_418267939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AC57_RS31295;product=hypothetical protein;protein_id=WP_418267939.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 7509 7652 . + . ID=gene-AC57_RS31090;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=AC57_RS31090;old_locus_tag=AC57_4787 NZ_JJLR01000158.1 Protein Homology CDS 7509 7652 . + 0 ID=cds-WP_001297228.1;Parent=gene-AC57_RS31090;Dbxref=GenBank:WP_001297228.1;Name=WP_001297228.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AC57_RS31090;product=protein YtiD;protein_id=WP_001297228.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 7768 7851 . + . ID=gene-AC57_RS30070;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AC57_RS30070 NZ_JJLR01000158.1 Protein Homology CDS 7768 7851 . + 0 ID=cds-WP_120795393.1;Parent=gene-AC57_RS30070;Dbxref=GenBank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AC57_RS30070;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 7848 8240 . + . ID=gene-AC57_RS01705;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AC57_RS01705;old_locus_tag=AC57_4789 NZ_JJLR01000158.1 Protein Homology CDS 7848 8240 . + 0 ID=cds-WP_001297236.1;Parent=gene-AC57_RS01705;Dbxref=GenBank:WP_001297236.1;Name=WP_001297236.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418746.4;locus_tag=AC57_RS01705;product=anti-adapter protein IraD;protein_id=WP_001297236.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 8233 9144 . - . ID=gene-AC57_RS01700;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AC57_RS01700;old_locus_tag=AC57_4790 NZ_JJLR01000158.1 Protein Homology CDS 8233 9144 . - 0 ID=cds-WP_000340758.1;Parent=gene-AC57_RS01700;Dbxref=GenBank:WP_000340758.1;Name=WP_000340758.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AC57_RS01700;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340758.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 9209 10381 . - . ID=gene-AC57_RS01695;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AC57_RS01695;old_locus_tag=AC57_4791 NZ_JJLR01000158.1 Protein Homology CDS 9209 10381 . - 0 ID=cds-WP_032279968.1;Parent=gene-AC57_RS01695;Dbxref=GenBank:WP_032279968.1;Name=WP_032279968.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AC57_RS01695;product=beta-aspartyl-peptidase;protein_id=WP_032279968.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 10394 10855 . - . ID=gene-AC57_RS01690;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AC57_RS01690;old_locus_tag=AC57_4792 NZ_JJLR01000158.1 Protein Homology CDS 10394 10855 . - 0 ID=cds-WP_000211971.1;Parent=gene-AC57_RS01690;Dbxref=GenBank:WP_000211971.1;Name=WP_000211971.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AC57_RS01690;product=YjiG family protein;protein_id=WP_000211971.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 10852 11535 . - . ID=gene-AC57_RS01685;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AC57_RS01685;old_locus_tag=AC57_4793 NZ_JJLR01000158.1 Protein Homology CDS 10852 11535 . - 0 ID=cds-WP_001295597.1;Parent=gene-AC57_RS01685;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AC57_RS01685;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 11785 12339 . + . ID=gene-AC57_RS01680;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AC57_RS01680;old_locus_tag=AC57_4794 NZ_JJLR01000158.1 Protein Homology CDS 11785 12339 . + 0 ID=cds-WP_001151855.1;Parent=gene-AC57_RS01680;Dbxref=GenBank:WP_001151855.1;Name=WP_001151855.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AC57_RS01680;product=RNA 2'-phosphotransferase;protein_id=WP_001151855.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 12352 13530 . - . ID=gene-AC57_RS01675;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AC57_RS01675;old_locus_tag=AC57_4795 NZ_JJLR01000158.1 Protein Homology CDS 12352 13530 . - 0 ID=cds-WP_001141196.1;Parent=gene-AC57_RS01675;Dbxref=GenBank:WP_001141196.1;Name=WP_001141196.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AC57_RS01675;product=MFS transporter;protein_id=WP_001141196.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 13598 14458 . - . ID=gene-AC57_RS01670;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AC57_RS01670;old_locus_tag=AC57_4796 NZ_JJLR01000158.1 Protein Homology CDS 13598 14458 . - 0 ID=cds-WP_001298932.1;Parent=gene-AC57_RS01670;Dbxref=GenBank:WP_001298932.1;Name=WP_001298932.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AC57_RS01670;product=SdiA-regulated domain-containing protein;protein_id=WP_001298932.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 14523 14780 . - . ID=gene-AC57_RS01665;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AC57_RS01665;old_locus_tag=AC57_4797 NZ_JJLR01000158.1 Protein Homology CDS 14523 14780 . - 0 ID=cds-WP_000657676.1;Parent=gene-AC57_RS01665;Dbxref=GenBank:WP_000657676.1;Name=WP_000657676.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AC57_RS01665;product=DUF3343 domain-containing protein;protein_id=WP_000657676.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 14777 15544 . - . ID=gene-AC57_RS01660;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AC57_RS01660;old_locus_tag=AC57_4798 NZ_JJLR01000158.1 Protein Homology CDS 14777 15544 . - 0 ID=cds-WP_000222495.1;Parent=gene-AC57_RS01660;Dbxref=GenBank:WP_000222495.1;Name=WP_000222495.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313324.1;locus_tag=AC57_RS01660;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_000222495.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 15554 16705 . - . ID=gene-AC57_RS01655;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AC57_RS01655;old_locus_tag=AC57_4799 NZ_JJLR01000158.1 Protein Homology CDS 15554 16705 . - 0 ID=cds-WP_001298064.1;Parent=gene-AC57_RS01655;Dbxref=GenBank:WP_001298064.1;Name=WP_001298064.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AC57_RS01655;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001298064.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 16821 18101 . - . ID=gene-AC57_RS01650;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AC57_RS01650;old_locus_tag=AC57_4800 NZ_JJLR01000158.1 Protein Homology CDS 16821 18101 . - 0 ID=cds-WP_001037400.1;Parent=gene-AC57_RS01650;Dbxref=GenBank:WP_001037400.1;Name=WP_001037400.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418756.1;locus_tag=AC57_RS01650;product=DUF445 domain-containing protein;protein_id=WP_001037400.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 18142 19374 . - . ID=gene-AC57_RS01645;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AC57_RS01645;old_locus_tag=AC57_4801 NZ_JJLR01000158.1 Protein Homology CDS 18142 19374 . - 0 ID=cds-WP_032279971.1;Parent=gene-AC57_RS01645;Dbxref=GenBank:WP_032279971.1;Name=WP_032279971.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001420685.1;locus_tag=AC57_RS01645;product=multidrug efflux MFS transporter MdtM;protein_id=WP_032279971.1;transl_table=11 NZ_JJLR01000158.1 RefSeq pseudogene 19520 19615 . - . ID=gene-AC57_RS28285;Name=AC57_RS28285;end_range=19615,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28285;partial=true;pseudo=true NZ_JJLR01000158.1 Protein Homology CDS 19520 19615 . - 0 ID=cds-AC57_RS28285;Parent=gene-AC57_RS28285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;end_range=19615,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AC57_RS28285;partial=true;product=dienelactone hydrolase family protein;pseudo=true;transl_table=11 NZ_JJLR01000158.1 RefSeq pseudogene 19672 20369 . + . ID=gene-AC57_RS28290;Name=AC57_RS28290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28290;pseudo=true NZ_JJLR01000158.1 Protein Homology CDS 19672 20369 . + 0 ID=cds-AC57_RS28290;Parent=gene-AC57_RS28290;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC57_RS28290;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000158.1 RefSeq pseudogene 20384 20458 . + . ID=gene-AC57_RS31300;Name=AC57_RS31300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31300;partial=true;pseudo=true;start_range=.,20384 NZ_JJLR01000158.1 Protein Homology CDS 20384 20458 . + 0 ID=cds-AC57_RS31300;Parent=gene-AC57_RS31300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001398269.1;locus_tag=AC57_RS31300;partial=true;product=phosphoethanolamine transferase;pseudo=true;start_range=.,20384;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 20555 21817 . - . ID=gene-AC57_RS01635;Name=AC57_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01635;old_locus_tag=AC57_4804 NZ_JJLR01000158.1 Protein Homology CDS 20555 21817 . - 0 ID=cds-WP_001218861.1-4;Parent=gene-AC57_RS01635;Dbxref=GenBank:WP_001218861.1;Name=WP_001218861.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708738.1;locus_tag=AC57_RS01635;product=tyrosine-type recombinase/integrase;protein_id=WP_001218861.1;transl_table=11 NZ_JJLR01000158.1 RefSeq gene 22015 22090 . - . ID=gene-AC57_RS01630;Name=AC57_RS01630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01630;old_locus_tag=AC57_4805 NZ_JJLR01000158.1 tRNAscan-SE tRNA 22015 22090 . - . ID=rna-AC57_RS01630;Parent=gene-AC57_RS01630;anticodon=(pos:complement(22055..22057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01630;product=tRNA-Phe NZ_JJLR01000158.1 tRNAscan-SE exon 22015 22090 . - . ID=exon-AC57_RS01630-1;Parent=rna-AC57_RS01630;anticodon=(pos:complement(22055..22057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01630;product=tRNA-Phe ##sequence-region NZ_JJLR01000159.1 1 20105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000159.1 RefSeq region 1 20105 . + . ID=NZ_JJLR01000159.1:1..20105;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000159.1 RefSeq gene 1 695 . + . ID=gene-AC57_RS01625;Name=AC57_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01625;old_locus_tag=AC57_4806;partial=true;start_range=.,1 NZ_JJLR01000159.1 Protein Homology CDS 1 247 . + 0 ID=cds-WP_249401514.1;Parent=gene-AC57_RS01625;Dbxref=GenBank:WP_249401514.1;Name=WP_249401514.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS01625;partial=true;product=IS1 family transposase;protein_id=WP_249401514.1;start_range=.,1;transl_table=11 NZ_JJLR01000159.1 Protein Homology CDS 247 695 . + 2 ID=cds-WP_249401514.1;Parent=gene-AC57_RS01625;Dbxref=GenBank:WP_249401514.1;Name=WP_249401514.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS01625;partial=true;product=IS1 family transposase;protein_id=WP_249401514.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 894 1181 . + . ID=gene-AC57_RS01620;Name=AC57_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01620;old_locus_tag=AC57_4807 NZ_JJLR01000159.1 Protein Homology CDS 894 1181 . + 0 ID=cds-WP_001297643.1;Parent=gene-AC57_RS01620;Dbxref=GenBank:WP_001297643.1;Name=WP_001297643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=AC57_RS01620;product=BrnT family toxin;protein_id=WP_001297643.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 1168 1470 . + . ID=gene-AC57_RS01615;Name=AC57_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01615;old_locus_tag=AC57_4808 NZ_JJLR01000159.1 Protein Homology CDS 1168 1470 . + 0 ID=cds-WP_000063156.1;Parent=gene-AC57_RS01615;Dbxref=GenBank:WP_000063156.1;Name=WP_000063156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020443.1;locus_tag=AC57_RS01615;product=BrnA antitoxin family protein;protein_id=WP_000063156.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 1504 2460 . - . ID=gene-AC57_RS01610;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AC57_RS01610;old_locus_tag=AC57_4809 NZ_JJLR01000159.1 Protein Homology CDS 1504 2460 . - 0 ID=cds-WP_001297640.1;Parent=gene-AC57_RS01610;Dbxref=GenBank:WP_001297640.1;Name=WP_001297640.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AC57_RS01610;product=GTPase;protein_id=WP_001297640.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 2471 2674 . - . ID=gene-AC57_RS01605;Name=AC57_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01605;old_locus_tag=AC57_4810 NZ_JJLR01000159.1 Protein Homology CDS 2471 2674 . - 0 ID=cds-WP_000467859.1;Parent=gene-AC57_RS01605;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AC57_RS01605;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 2724 4874 . - . ID=gene-AC57_RS01600;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AC57_RS01600;old_locus_tag=AC57_4811 NZ_JJLR01000159.1 Protein Homology CDS 2724 4874 . - 0 ID=cds-WP_001295524.1;Parent=gene-AC57_RS01600;Dbxref=GenBank:WP_001295524.1;Name=WP_001295524.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418774.2;locus_tag=AC57_RS01600;product=pyruvate/proton symporter BtsT;protein_id=WP_001295524.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 5251 6915 . + . ID=gene-AC57_RS01595;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AC57_RS01595;old_locus_tag=AC57_4812 NZ_JJLR01000159.1 Protein Homology CDS 5251 6915 . + 0 ID=cds-WP_032279626.1;Parent=gene-AC57_RS01595;Dbxref=GenBank:WP_032279626.1;Name=WP_032279626.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313342.1;locus_tag=AC57_RS01595;product=methyl-accepting chemotaxis protein;protein_id=WP_032279626.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 6964 8325 . - . ID=gene-AC57_RS01590;Name=AC57_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01590;old_locus_tag=AC57_4813 NZ_JJLR01000159.1 Protein Homology CDS 6964 8325 . - 0 ID=cds-WP_032279624.1;Parent=gene-AC57_RS01590;Dbxref=GenBank:WP_032279624.1;Name=WP_032279624.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313343.1;locus_tag=AC57_RS01590;product=MFS transporter;protein_id=WP_032279624.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 8542 9456 . - . ID=gene-AC57_RS01585;Name=AC57_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01585;old_locus_tag=AC57_4814 NZ_JJLR01000159.1 Protein Homology CDS 8542 9456 . - 0 ID=cds-WP_032279623.1;Parent=gene-AC57_RS01585;Dbxref=GenBank:WP_032279623.1;Name=WP_032279623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026290.1;locus_tag=AC57_RS01585;product=GntR family transcriptional regulator;protein_id=WP_032279623.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 9595 10617 . + . ID=gene-AC57_RS01580;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AC57_RS01580;old_locus_tag=AC57_4815 NZ_JJLR01000159.1 Protein Homology CDS 9595 10617 . + 0 ID=cds-WP_032279622.1;Parent=gene-AC57_RS01580;Dbxref=GenBank:WP_032279622.1;Name=WP_032279622.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AC57_RS01580;product=L-galactonate oxidoreductase;protein_id=WP_032279622.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 10757 13048 . - . ID=gene-AC57_RS01575;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AC57_RS01575;old_locus_tag=AC57_4816 NZ_JJLR01000159.1 Protein Homology CDS 10757 13048 . - 0 ID=cds-WP_001292621.1;Parent=gene-AC57_RS01575;Dbxref=GenBank:WP_001292621.1;Name=WP_001292621.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AC57_RS01575;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292621.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 13302 13796 . - . ID=gene-AC57_RS01570;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AC57_RS01570;old_locus_tag=AC57_4817 NZ_JJLR01000159.1 Protein Homology CDS 13302 13796 . - 0 ID=cds-WP_001308243.1;Parent=gene-AC57_RS01570;Dbxref=GenBank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AC57_RS01570;product=DUF2501 domain-containing protein YjjA;protein_id=WP_001308243.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 13845 14582 . - . ID=gene-AC57_RS01565;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AC57_RS01565;old_locus_tag=AC57_4818 NZ_JJLR01000159.1 Protein Homology CDS 13845 14582 . - 0 ID=cds-WP_000799911.1;Parent=gene-AC57_RS01565;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AC57_RS01565;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 14585 15124 . - . ID=gene-AC57_RS01560;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AC57_RS01560;old_locus_tag=AC57_4819 NZ_JJLR01000159.1 Protein Homology CDS 14585 15124 . - 0 ID=cds-WP_000098818.1;Parent=gene-AC57_RS01560;Dbxref=GenBank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AC57_RS01560;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 15231 15704 . - . ID=gene-AC57_RS01555;Name=AC57_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01555;old_locus_tag=AC57_4820 NZ_JJLR01000159.1 Protein Homology CDS 15231 15704 . - 0 ID=cds-WP_000538188.1;Parent=gene-AC57_RS01555;Dbxref=GenBank:WP_000538188.1;Name=WP_000538188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AC57_RS01555;product=threonine/serine exporter;protein_id=WP_000538188.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 15695 16465 . - . ID=gene-AC57_RS01550;Name=AC57_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01550;old_locus_tag=AC57_4821 NZ_JJLR01000159.1 Protein Homology CDS 15695 16465 . - 0 ID=cds-WP_001341281.1;Parent=gene-AC57_RS01550;Dbxref=GenBank:WP_001341281.1;Name=WP_001341281.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AC57_RS01550;product=threonine/serine ThrE exporter family protein;protein_id=WP_001341281.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 17084 17809 . + . ID=gene-AC57_RS01545;Name=AC57_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01545;old_locus_tag=AC57_4822 NZ_JJLR01000159.1 Protein Homology CDS 17084 17809 . + 0 ID=cds-WP_000936635.1;Parent=gene-AC57_RS01545;Dbxref=GenBank:WP_000936635.1;Name=WP_000936635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AC57_RS01545;product=helix-turn-helix domain-containing protein;protein_id=WP_000936635.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 17767 18444 . + . ID=gene-AC57_RS01540;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AC57_RS01540;old_locus_tag=AC57_4823 NZ_JJLR01000159.1 Protein Homology CDS 17767 18444 . + 0 ID=cds-WP_001375472.1;Parent=gene-AC57_RS01540;Dbxref=GenBank:WP_001375472.1;Name=WP_001375472.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AC57_RS01540;product=DNA-binding transcriptional activator BglJ;protein_id=WP_001375472.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 18482 19270 . - . ID=gene-AC57_RS01535;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AC57_RS01535;old_locus_tag=AC57_4824 NZ_JJLR01000159.1 Protein Homology CDS 18482 19270 . - 0 ID=cds-WP_032279621.1;Parent=gene-AC57_RS01535;Dbxref=GenBank:WP_032279621.1;Name=WP_032279621.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313354.1;locus_tag=AC57_RS01535;product=siderophore-iron reductase FhuF;protein_id=WP_032279621.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 19411 19647 . + . ID=gene-AC57_RS01530;Name=AC57_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01530;old_locus_tag=AC57_4825 NZ_JJLR01000159.1 Protein Homology CDS 19411 19647 . + 0 ID=cds-WP_148725161.1;Parent=gene-AC57_RS01530;Dbxref=GenBank:WP_148725161.1;Name=WP_148725161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=AC57_RS01530;product=DUF1435 domain-containing protein;protein_id=WP_148725161.1;transl_table=11 NZ_JJLR01000159.1 RefSeq gene 19686 19772 . - . ID=gene-AC57_RS01525;Name=AC57_RS01525;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01525;old_locus_tag=AC57_4826 NZ_JJLR01000159.1 tRNAscan-SE tRNA 19686 19772 . - . ID=rna-AC57_RS01525;Parent=gene-AC57_RS01525;anticodon=(pos:complement(19736..19738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01525;product=tRNA-Leu NZ_JJLR01000159.1 tRNAscan-SE exon 19686 19772 . - . ID=exon-AC57_RS01525-1;Parent=rna-AC57_RS01525;anticodon=(pos:complement(19736..19738));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01525;product=tRNA-Leu NZ_JJLR01000159.1 RefSeq gene 19806 19892 . - . ID=gene-AC57_RS01520;Name=AC57_RS01520;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01520;old_locus_tag=AC57_4827 NZ_JJLR01000159.1 tRNAscan-SE tRNA 19806 19892 . - . ID=rna-AC57_RS01520;Parent=gene-AC57_RS01520;anticodon=(pos:complement(19856..19858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01520;product=tRNA-Leu NZ_JJLR01000159.1 tRNAscan-SE exon 19806 19892 . - . ID=exon-AC57_RS01520-1;Parent=rna-AC57_RS01520;anticodon=(pos:complement(19856..19858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01520;product=tRNA-Leu NZ_JJLR01000159.1 RefSeq gene 19921 20007 . - . ID=gene-AC57_RS01515;Name=AC57_RS01515;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01515;old_locus_tag=AC57_4828 NZ_JJLR01000159.1 tRNAscan-SE tRNA 19921 20007 . - . ID=rna-AC57_RS01515;Parent=gene-AC57_RS01515;anticodon=(pos:complement(19971..19973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01515;product=tRNA-Leu NZ_JJLR01000159.1 tRNAscan-SE exon 19921 20007 . - . ID=exon-AC57_RS01515-1;Parent=rna-AC57_RS01515;anticodon=(pos:complement(19971..19973));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01515;product=tRNA-Leu ##sequence-region NZ_JJLR01000160.1 1 52130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000160.1 RefSeq region 1 52130 . + . ID=NZ_JJLR01000160.1:1..52130;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000160.1 RefSeq gene 52 1287 . - . ID=gene-AC57_RS01510;Name=AC57_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01510;old_locus_tag=AC57_4829 NZ_JJLR01000160.1 Protein Homology CDS 52 1287 . - 0 ID=cds-WP_000941517.1-2;Parent=gene-AC57_RS01510;Dbxref=GenBank:WP_000941517.1;Name=WP_000941517.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026259.1;locus_tag=AC57_RS01510;product=anaerobic sulfatase maturase;protein_id=WP_000941517.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 1434 1510 . - . ID=gene-AC57_RS01505;Name=AC57_RS01505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01505;old_locus_tag=AC57_4830 NZ_JJLR01000160.1 tRNAscan-SE tRNA 1434 1510 . - . ID=rna-AC57_RS01505;Parent=gene-AC57_RS01505;anticodon=(pos:complement(1474..1476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01505;product=tRNA-Pro NZ_JJLR01000160.1 tRNAscan-SE exon 1434 1510 . - . ID=exon-AC57_RS01505-1;Parent=rna-AC57_RS01505;anticodon=(pos:complement(1474..1476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01505;product=tRNA-Pro NZ_JJLR01000160.1 RefSeq gene 1553 1639 . - . ID=gene-AC57_RS01500;Name=AC57_RS01500;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01500;old_locus_tag=AC57_4831 NZ_JJLR01000160.1 tRNAscan-SE tRNA 1553 1639 . - . ID=rna-AC57_RS01500;Parent=gene-AC57_RS01500;anticodon=(pos:complement(1603..1605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01500;product=tRNA-Leu NZ_JJLR01000160.1 tRNAscan-SE exon 1553 1639 . - . ID=exon-AC57_RS01500-1;Parent=rna-AC57_RS01500;anticodon=(pos:complement(1603..1605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01500;product=tRNA-Leu NZ_JJLR01000160.1 RefSeq gene 1673 1759 . - . ID=gene-AC57_RS01495;Name=AC57_RS01495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01495;old_locus_tag=AC57_4832 NZ_JJLR01000160.1 tRNAscan-SE tRNA 1673 1759 . - . ID=rna-AC57_RS01495;Parent=gene-AC57_RS01495;anticodon=(pos:complement(1723..1725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01495;product=tRNA-Leu NZ_JJLR01000160.1 tRNAscan-SE exon 1673 1759 . - . ID=exon-AC57_RS01495-1;Parent=rna-AC57_RS01495;anticodon=(pos:complement(1723..1725));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01495;product=tRNA-Leu NZ_JJLR01000160.1 RefSeq gene 1788 1874 . - . ID=gene-AC57_RS01490;Name=AC57_RS01490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01490;old_locus_tag=AC57_4833 NZ_JJLR01000160.1 tRNAscan-SE tRNA 1788 1874 . - . ID=rna-AC57_RS01490;Parent=gene-AC57_RS01490;anticodon=(pos:complement(1838..1840));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01490;product=tRNA-Leu NZ_JJLR01000160.1 tRNAscan-SE exon 1788 1874 . - . ID=exon-AC57_RS01490-1;Parent=rna-AC57_RS01490;anticodon=(pos:complement(1838..1840));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01490;product=tRNA-Leu NZ_JJLR01000160.1 RefSeq gene 1908 1994 . - . ID=gene-AC57_RS01485;Name=AC57_RS01485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01485;old_locus_tag=AC57_4834 NZ_JJLR01000160.1 tRNAscan-SE tRNA 1908 1994 . - . ID=rna-AC57_RS01485;Parent=gene-AC57_RS01485;anticodon=(pos:complement(1958..1960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01485;product=tRNA-Leu NZ_JJLR01000160.1 tRNAscan-SE exon 1908 1994 . - . ID=exon-AC57_RS01485-1;Parent=rna-AC57_RS01485;anticodon=(pos:complement(1958..1960));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01485;product=tRNA-Leu NZ_JJLR01000160.1 RefSeq gene 2023 2109 . - . ID=gene-AC57_RS01480;Name=AC57_RS01480;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS01480;old_locus_tag=AC57_4835 NZ_JJLR01000160.1 tRNAscan-SE tRNA 2023 2109 . - . ID=rna-AC57_RS01480;Parent=gene-AC57_RS01480;anticodon=(pos:complement(2073..2075));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01480;product=tRNA-Leu NZ_JJLR01000160.1 tRNAscan-SE exon 2023 2109 . - . ID=exon-AC57_RS01480-1;Parent=rna-AC57_RS01480;anticodon=(pos:complement(2073..2075));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS01480;product=tRNA-Leu NZ_JJLR01000160.1 RefSeq gene 2410 3441 . - . ID=gene-AC57_RS01475;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AC57_RS01475;old_locus_tag=AC57_4836 NZ_JJLR01000160.1 Protein Homology CDS 2410 3441 . - 0 ID=cds-WP_001272306.1;Parent=gene-AC57_RS01475;Dbxref=GenBank:WP_001272306.1;Name=WP_001272306.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AC57_RS01475;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272306.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 3544 3957 . + . ID=gene-AC57_RS01470;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AC57_RS01470;old_locus_tag=AC57_4837 NZ_JJLR01000160.1 Protein Homology CDS 3544 3957 . + 0 ID=cds-WP_000204018.1;Parent=gene-AC57_RS01470;Dbxref=GenBank:WP_000204018.1;Name=WP_000204018.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AC57_RS01470;product=DNA polymerase III subunit psi;protein_id=WP_000204018.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 3926 4372 . + . ID=gene-AC57_RS01465;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AC57_RS01465;old_locus_tag=AC57_4838 NZ_JJLR01000160.1 Protein Homology CDS 3926 4372 . + 0 ID=cds-WP_001092461.1;Parent=gene-AC57_RS01465;Dbxref=GenBank:WP_001092461.1;Name=WP_001092461.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AC57_RS01465;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092461.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 4387 5064 . + . ID=gene-AC57_RS01460;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AC57_RS01460;old_locus_tag=AC57_4839 NZ_JJLR01000160.1 Protein Homology CDS 4387 5064 . + 0 ID=cds-WP_000870712.1;Parent=gene-AC57_RS01460;Dbxref=GenBank:WP_000870712.1;Name=WP_000870712.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=AC57_RS01460;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870712.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 5155 6744 . + . ID=gene-AC57_RS01455;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AC57_RS01455;old_locus_tag=AC57_4840 NZ_JJLR01000160.1 Protein Homology CDS 5155 6744 . + 0 ID=cds-WP_032279618.1;Parent=gene-AC57_RS01455;Dbxref=GenBank:WP_032279618.1;Name=WP_032279618.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AC57_RS01455;product=peptide chain release factor 3;protein_id=WP_032279618.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 7137 7742 . + . ID=gene-AC57_RS01450;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AC57_RS01450;old_locus_tag=AC57_4841 NZ_JJLR01000160.1 Protein Homology CDS 7137 7742 . + 0 ID=cds-WP_001295748.1;Parent=gene-AC57_RS01450;Dbxref=GenBank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AC57_RS01450;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 7869 8030 . + . ID=gene-AC57_RS01445;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=AC57_RS01445;old_locus_tag=AC57_4842 NZ_JJLR01000160.1 Protein Homology CDS 7869 8030 . + 0 ID=cds-WP_000490275.1;Parent=gene-AC57_RS01445;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;gene=ytjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AC57_RS01445;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 8152 9225 . + . ID=gene-AC57_RS01440;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=AC57_RS01440;old_locus_tag=AC57_4843 NZ_JJLR01000160.1 Protein Homology CDS 8152 9225 . + 0 ID=cds-WP_032279617.1;Parent=gene-AC57_RS01440;Dbxref=GenBank:WP_032279617.1;Name=WP_032279617.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AC57_RS01440;product=patatin-like phospholipase family protein;protein_id=WP_032279617.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 9222 10004 . + . ID=gene-AC57_RS01435;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AC57_RS01435;old_locus_tag=AC57_4844 NZ_JJLR01000160.1 Protein Homology CDS 9222 10004 . + 0 ID=cds-WP_032279615.1;Parent=gene-AC57_RS01435;Dbxref=GenBank:WP_032279615.1;Name=WP_032279615.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AC57_RS01435;product=metal-dependent hydrolase;protein_id=WP_032279615.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 10218 11081 . - . ID=gene-AC57_RS01430;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AC57_RS01430;old_locus_tag=AC57_4845 NZ_JJLR01000160.1 Protein Homology CDS 10218 11081 . - 0 ID=cds-WP_001088439.1;Parent=gene-AC57_RS01430;Dbxref=GenBank:WP_001088439.1;Name=WP_001088439.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AC57_RS01430;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088439.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 11053 12603 . - . ID=gene-AC57_RS01425;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AC57_RS01425;old_locus_tag=AC57_4846 NZ_JJLR01000160.1 Protein Homology CDS 11053 12603 . - 0 ID=cds-WP_032279614.1;Parent=gene-AC57_RS01425;Dbxref=GenBank:WP_032279614.1;Name=WP_032279614.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AC57_RS01425;product=YjjI family glycine radical enzyme;protein_id=WP_032279614.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 12861 13640 . + . ID=gene-AC57_RS01420;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AC57_RS01420;old_locus_tag=AC57_4848 NZ_JJLR01000160.1 Protein Homology CDS 12861 13640 . + 0 ID=cds-WP_001295412.1;Parent=gene-AC57_RS01420;Dbxref=GenBank:WP_001295412.1;Name=WP_001295412.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AC57_RS01420;product=deoxyribose-phosphate aldolase;protein_id=WP_001295412.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 13767 15089 . + . ID=gene-AC57_RS01415;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AC57_RS01415;old_locus_tag=AC57_4849 NZ_JJLR01000160.1 Protein Homology CDS 13767 15089 . + 0 ID=cds-WP_000477811.1;Parent=gene-AC57_RS01415;Dbxref=GenBank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AC57_RS01415;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 15141 16364 . + . ID=gene-AC57_RS01410;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AC57_RS01410;old_locus_tag=AC57_4850 NZ_JJLR01000160.1 Protein Homology CDS 15141 16364 . + 0 ID=cds-WP_000816471.1;Parent=gene-AC57_RS01410;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AC57_RS01410;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 16421 17140 . + . ID=gene-AC57_RS01405;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AC57_RS01405;old_locus_tag=AC57_4851 NZ_JJLR01000160.1 Protein Homology CDS 16421 17140 . + 0 ID=cds-WP_000224879.1;Parent=gene-AC57_RS01405;Dbxref=GenBank:WP_000224879.1;Name=WP_000224879.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710124.2;locus_tag=AC57_RS01405;product=purine-nucleoside phosphorylase;protein_id=WP_000224879.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 17301 17564 . - . ID=gene-AC57_RS01400;Name=AC57_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01400;old_locus_tag=AC57_4852 NZ_JJLR01000160.1 Protein Homology CDS 17301 17564 . - 0 ID=cds-WP_000566152.1;Parent=gene-AC57_RS01400;Dbxref=GenBank:WP_000566152.1;Name=WP_000566152.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313371.1;locus_tag=AC57_RS01400;product=helix-turn-helix domain-containing protein;protein_id=WP_000566152.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 17596 18612 . - . ID=gene-AC57_RS30075;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AC57_RS30075;old_locus_tag=AC57_4853 NZ_JJLR01000160.1 Protein Homology CDS 17596 18612 . - 0 ID=cds-WP_000105889.1;Parent=gene-AC57_RS30075;Dbxref=GenBank:WP_000105889.1;Name=WP_000105889.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AC57_RS30075;product=lipoate--protein ligase LplA;protein_id=WP_000105889.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 18640 19284 . - . ID=gene-AC57_RS30080;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AC57_RS30080;old_locus_tag=AC57_4854 NZ_JJLR01000160.1 Protein Homology CDS 18640 19284 . - 0 ID=cds-WP_000124615.1;Parent=gene-AC57_RS30080;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AC57_RS30080;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 19390 20358 . + . ID=gene-AC57_RS01385;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AC57_RS01385;old_locus_tag=AC57_4855 NZ_JJLR01000160.1 Protein Homology CDS 19390 20358 . + 0 ID=cds-WP_001132956.1;Parent=gene-AC57_RS01385;Dbxref=GenBank:WP_001132956.1;Name=WP_001132956.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AC57_RS01385;product=phosphoserine phosphatase;protein_id=WP_001132956.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 20407 21789 . + . ID=gene-AC57_RS01380;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AC57_RS01380;old_locus_tag=AC57_4856 NZ_JJLR01000160.1 Protein Homology CDS 20407 21789 . + 0 ID=cds-WP_032285766.1;Parent=gene-AC57_RS01380;Dbxref=GenBank:WP_032285766.1;Name=WP_032285766.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AC57_RS01380;product=DNA repair protein RadA;protein_id=WP_032285766.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 21810 23042 . + . ID=gene-AC57_RS01375;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AC57_RS01375;old_locus_tag=AC57_4857 NZ_JJLR01000160.1 Protein Homology CDS 21810 23042 . + 0 ID=cds-WP_000093813.1;Parent=gene-AC57_RS01375;Dbxref=GenBank:WP_000093813.1;Name=WP_000093813.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418807.4;locus_tag=AC57_RS01375;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093813.1;transl_table=11 NZ_JJLR01000160.1 RefSeq pseudogene 23093 23188 . + . ID=gene-AC57_RS31305;Name=AC57_RS31305;end_range=23188,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31305;partial=true;pseudo=true NZ_JJLR01000160.1 Protein Homology CDS 23093 23188 . + 0 ID=cds-AC57_RS31305;Parent=gene-AC57_RS31305;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=23188,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007436.1;locus_tag=AC57_RS31305;partial=true;product=NadS family protein;pseudo=true;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 23349 25016 . - . ID=gene-AC57_RS01370;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AC57_RS01370;old_locus_tag=AC57_4858 NZ_JJLR01000160.1 Protein Homology CDS 23349 25016 . - 0 ID=cds-WP_000046749.1;Parent=gene-AC57_RS01370;Dbxref=GenBank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AC57_RS01370;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 25227 27164 . + . ID=gene-AC57_RS01365;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AC57_RS01365;old_locus_tag=AC57_4859 NZ_JJLR01000160.1 Protein Homology CDS 25227 27164 . + 0 ID=cds-WP_032285767.1;Parent=gene-AC57_RS01365;Dbxref=GenBank:WP_032285767.1;Name=WP_032285767.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AC57_RS01365;product=murein transglycosylase;protein_id=WP_032285767.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 27254 27580 . + . ID=gene-AC57_RS01360;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AC57_RS01360;old_locus_tag=AC57_4860 NZ_JJLR01000160.1 Protein Homology CDS 27254 27580 . + 0 ID=cds-WP_032279611.1;Parent=gene-AC57_RS01360;Dbxref=GenBank:WP_032279611.1;Name=WP_032279611.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AC57_RS01360;product=trp operon repressor;protein_id=WP_032279611.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 27733 28245 . - . ID=gene-AC57_RS01355;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AC57_RS01355;old_locus_tag=AC57_4861 NZ_JJLR01000160.1 Protein Homology CDS 27733 28245 . - 0 ID=cds-WP_001338221.1;Parent=gene-AC57_RS01355;Dbxref=GenBank:WP_001338221.1;Name=WP_001338221.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418811.2;locus_tag=AC57_RS01355;product=inosine/xanthosine triphosphatase;protein_id=WP_001338221.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 28297 28944 . + . ID=gene-AC57_RS01350;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AC57_RS01350;old_locus_tag=AC57_4862 NZ_JJLR01000160.1 Protein Homology CDS 28297 28944 . + 0 ID=cds-WP_000942344.1;Parent=gene-AC57_RS01350;Dbxref=GenBank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AC57_RS01350;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 28941 29810 . - . ID=gene-AC57_RS01345;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AC57_RS01345;old_locus_tag=AC57_4863 NZ_JJLR01000160.1 Protein Homology CDS 28941 29810 . - 0 ID=cds-WP_000371666.1;Parent=gene-AC57_RS01345;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AC57_RS01345;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 30021 30494 . + . ID=gene-AC57_RS01340;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AC57_RS01340;old_locus_tag=AC57_4864 NZ_JJLR01000160.1 Protein Homology CDS 30021 30494 . + 0 ID=cds-WP_000875487.1;Parent=gene-AC57_RS01340;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AC57_RS01340;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 30507 31196 . + . ID=gene-AC57_RS01335;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AC57_RS01335;old_locus_tag=AC57_4865 NZ_JJLR01000160.1 Protein Homology CDS 30507 31196 . + 0 ID=cds-WP_001188663.1;Parent=gene-AC57_RS01335;Dbxref=GenBank:WP_001188663.1;Name=WP_001188663.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710136.1;locus_tag=AC57_RS01335;product=two-component system response regulator CreB;protein_id=WP_001188663.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 31196 32620 . + . ID=gene-AC57_RS01330;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AC57_RS01330;old_locus_tag=AC57_4866 NZ_JJLR01000160.1 Protein Homology CDS 31196 32620 . + 0 ID=cds-WP_001219614.1;Parent=gene-AC57_RS01330;Dbxref=GenBank:WP_001219614.1;Name=WP_001219614.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313384.1;locus_tag=AC57_RS01330;product=two-component system sensor histidine kinase CreC;protein_id=WP_001219614.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 32678 34030 . + . ID=gene-AC57_RS01325;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AC57_RS01325;old_locus_tag=AC57_4867 NZ_JJLR01000160.1 Protein Homology CDS 32678 34030 . + 0 ID=cds-WP_032279608.1;Parent=gene-AC57_RS01325;Dbxref=GenBank:WP_032279608.1;Name=WP_032279608.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710138.1;locus_tag=AC57_RS01325;product=cell envelope integrity protein CreD;protein_id=WP_032279608.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 34090 34806 . - . ID=gene-AC57_RS01320;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AC57_RS01320;old_locus_tag=AC57_4868 NZ_JJLR01000160.1 Protein Homology CDS 34090 34806 . - 0 ID=cds-WP_001194358.1;Parent=gene-AC57_RS01320;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AC57_RS01320;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 34902 35042 . + . ID=gene-AC57_RS0125700;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AC57_RS0125700 NZ_JJLR01000160.1 Protein Homology CDS 34902 35042 . + 0 ID=cds-WP_001303782.1;Parent=gene-AC57_RS0125700;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AC57_RS0125700;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 35442 36128 . + . ID=gene-AC57_RS01315;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AC57_RS01315;old_locus_tag=AC57_4869 NZ_JJLR01000160.1 Protein Homology CDS 35442 36128 . + 0 ID=cds-WP_032279606.1;Parent=gene-AC57_RS01315;Dbxref=GenBank:WP_032279606.1;Name=WP_032279606.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710140.2;locus_tag=AC57_RS01315;product=tRNA/rRNA methyltransferase;protein_id=WP_032279606.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 36342 36407 . + . ID=gene-AC57_RS0125705;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AC57_RS0125705 NZ_JJLR01000160.1 Protein Homology CDS 36342 36407 . + 0 ID=cds-WP_001386572.1;Parent=gene-AC57_RS0125705;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AC57_RS0125705;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JJLR01000160.1 cmsearch sequence_feature 36343 36462 . + . ID=id-NZ_JJLR01000160.1:36343..36462;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLR01000160.1 RefSeq gene 36488 38950 . + . ID=gene-AC57_RS01310;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AC57_RS01310;old_locus_tag=AC57_4870 NZ_JJLR01000160.1 Protein Homology CDS 36488 38950 . + 0 ID=cds-WP_001264700.1;Parent=gene-AC57_RS01310;Dbxref=GenBank:WP_001264700.1;Name=WP_001264700.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AC57_RS01310;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_001264700.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 38952 39884 . + . ID=gene-AC57_RS01305;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AC57_RS01305;old_locus_tag=AC57_4871 NZ_JJLR01000160.1 Protein Homology CDS 38952 39884 . + 0 ID=cds-WP_000241660.1;Parent=gene-AC57_RS01305;Dbxref=GenBank:WP_000241660.1;Name=WP_000241660.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308030.1;locus_tag=AC57_RS01305;product=homoserine kinase;protein_id=WP_000241660.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 39885 41171 . + . ID=gene-AC57_RS01300;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AC57_RS01300;old_locus_tag=AC57_4872 NZ_JJLR01000160.1 Protein Homology CDS 39885 41171 . + 0 ID=cds-WP_000781063.1;Parent=gene-AC57_RS01300;Dbxref=GenBank:WP_000781063.1;Name=WP_000781063.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308031.1;locus_tag=AC57_RS01300;product=threonine synthase;protein_id=WP_000781063.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 41384 41680 . + . ID=gene-AC57_RS01295;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=AC57_RS01295;old_locus_tag=AC57_4873 NZ_JJLR01000160.1 Protein Homology CDS 41384 41680 . + 0 ID=cds-WP_000738723.1;Parent=gene-AC57_RS01295;Dbxref=GenBank:WP_000738723.1;Name=WP_000738723.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414546.1;locus_tag=AC57_RS01295;product=DUF2502 domain-containing protein;protein_id=WP_000738723.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 41833 42609 . - . ID=gene-AC57_RS01290;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AC57_RS01290;old_locus_tag=AC57_4874 NZ_JJLR01000160.1 Protein Homology CDS 41833 42609 . - 0 ID=cds-WP_000906203.1;Parent=gene-AC57_RS01290;Dbxref=GenBank:WP_000906203.1;Name=WP_000906203.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308033.1;locus_tag=AC57_RS01290;product=peroxide stress protein YaaA;protein_id=WP_000906203.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 42679 44109 . - . ID=gene-AC57_RS01285;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=AC57_RS01285;old_locus_tag=AC57_4875 NZ_JJLR01000160.1 Protein Homology CDS 42679 44109 . - 0 ID=cds-WP_001112563.1;Parent=gene-AC57_RS01285;Dbxref=GenBank:WP_001112563.1;Name=WP_001112563.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;gene=yaaJ;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414548.1;locus_tag=AC57_RS01285;product=alanine/glycine:cation symporter family protein;protein_id=WP_001112563.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 44388 45341 . + . ID=gene-AC57_RS01280;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AC57_RS01280;old_locus_tag=AC57_4876 NZ_JJLR01000160.1 Protein Homology CDS 44388 45341 . + 0 ID=cds-WP_000130185.1;Parent=gene-AC57_RS01280;Dbxref=GenBank:WP_000130185.1;Name=WP_000130185.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AC57_RS01280;product=transaldolase;protein_id=WP_000130185.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 45456 46043 . + . ID=gene-AC57_RS01275;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AC57_RS01275;old_locus_tag=AC57_4877 NZ_JJLR01000160.1 Protein Homology CDS 45456 46043 . + 0 ID=cds-WP_001094682.1;Parent=gene-AC57_RS01275;Dbxref=GenBank:WP_001094682.1;Name=WP_001094682.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AC57_RS01275;product=molybdopterin adenylyltransferase;protein_id=WP_001094682.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 46078 46644 . - . ID=gene-AC57_RS01270;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AC57_RS01270;old_locus_tag=AC57_4878 NZ_JJLR01000160.1 Protein Homology CDS 46078 46644 . - 0 ID=cds-WP_000528538.1;Parent=gene-AC57_RS01270;Dbxref=GenBank:WP_000528538.1;Name=WP_000528538.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AC57_RS01270;product=acetate uptake transporter;protein_id=WP_000528538.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 46793 47506 . - . ID=gene-AC57_RS01265;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AC57_RS01265;old_locus_tag=AC57_4879 NZ_JJLR01000160.1 Protein Homology CDS 46793 47506 . - 0 ID=cds-WP_001102379.1;Parent=gene-AC57_RS01265;Dbxref=GenBank:WP_001102379.1;Name=WP_001102379.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AC57_RS01265;product=acidic protein MsyB;protein_id=WP_001102379.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 47532 47936 . - . ID=gene-AC57_RS01260;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=AC57_RS01260;old_locus_tag=AC57_4880 NZ_JJLR01000160.1 Protein Homology CDS 47532 47936 . - 0 ID=cds-WP_000843559.1;Parent=gene-AC57_RS01260;Dbxref=GenBank:WP_000843559.1;Name=WP_000843559.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705972.1;locus_tag=AC57_RS01260;product=DUF2541 family protein;protein_id=WP_000843559.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 48313 50229 . + . ID=gene-AC57_RS01255;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AC57_RS01255;old_locus_tag=AC57_4881 NZ_JJLR01000160.1 Protein Homology CDS 48313 50229 . + 0 ID=cds-WP_000516135.1;Parent=gene-AC57_RS01255;Dbxref=GenBank:WP_000516135.1;Name=WP_000516135.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AC57_RS01255;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11 NZ_JJLR01000160.1 RefSeq gene 50318 51448 . + . ID=gene-AC57_RS01250;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AC57_RS01250;old_locus_tag=AC57_4882 NZ_JJLR01000160.1 Protein Homology CDS 50318 51448 . + 0 ID=cds-WP_001118446.1;Parent=gene-AC57_RS01250;Dbxref=GenBank:WP_001118446.1;Name=WP_001118446.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=AC57_RS01250;product=molecular chaperone DnaJ;protein_id=WP_001118446.1;transl_table=11 NZ_JJLR01000160.1 RefSeq pseudogene 51595 52130 . + . ID=gene-AC57_RS01245;Name=AC57_RS01245;end_range=52130,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01245;old_locus_tag=AC57_4883;partial=true;pseudo=true NZ_JJLR01000160.1 Protein Homology CDS 51595 52130 . + 0 ID=cds-AC57_RS01245;Parent=gene-AC57_RS01245;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=52130,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS01245;partial=true;product=IS4-like element IS186B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000161.1 1 806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000161.1 RefSeq region 1 806 . + . ID=NZ_JJLR01000161.1:1..806;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000161.1 RefSeq gene 100 483 . - . ID=gene-AC57_RS01240;Name=AC57_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01240;old_locus_tag=AC57_4884 NZ_JJLR01000161.1 Protein Homology CDS 100 483 . - 0 ID=cds-WP_001326558.1-3;Parent=gene-AC57_RS01240;Dbxref=GenBank:WP_001326558.1;Name=WP_001326558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418435.1;locus_tag=AC57_RS01240;product=YjaA family stress response protein;protein_id=WP_001326558.1;transl_table=11 NZ_JJLR01000161.1 RefSeq gene 560 675 . - . ID=gene-AC57_RS01235;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS01235;old_locus_tag=AC57_4885 NZ_JJLR01000161.1 cmsearch rRNA 560 675 . - . ID=rna-AC57_RS01235;Parent=gene-AC57_RS01235;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS01235;product=5S ribosomal RNA NZ_JJLR01000161.1 cmsearch exon 560 675 . - . ID=exon-AC57_RS01235-1;Parent=rna-AC57_RS01235;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS01235;product=5S ribosomal RNA ##sequence-region NZ_JJLR01000162.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000162.1 RefSeq region 1 2047 . + . ID=NZ_JJLR01000162.1:1..2047;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000162.1 RefSeq pseudogene 1 226 . + . ID=gene-AC57_RS01230;Name=AC57_RS01230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01230;old_locus_tag=AC57_4886;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000162.1 Protein Homology CDS 1 226 . + 1 ID=cds-AC57_RS01230;Parent=gene-AC57_RS01230;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AC57_RS01230;partial=true;product=glutathione-disulfide reductase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000162.1 RefSeq gene 280 363 . - . ID=gene-AC57_RS01225;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AC57_RS01225;old_locus_tag=AC57_4887 NZ_JJLR01000162.1 Protein Homology CDS 280 363 . - 0 ID=cds-WP_001295215.1-2;Parent=gene-AC57_RS01225;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AC57_RS01225;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JJLR01000162.1 RefSeq gene 1103 1456 . + . ID=gene-AC57_RS01215;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=AC57_RS01215;old_locus_tag=AC57_4889 NZ_JJLR01000162.1 Protein Homology CDS 1103 1456 . + 0 ID=cds-WP_000008957.1-2;Parent=gene-AC57_RS01215;Dbxref=GenBank:WP_000008957.1;Name=WP_000008957.1;gbkey=CDS;gene=arsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417958.1;locus_tag=AC57_RS01215;product=As(III)-sensing metalloregulatory transcriptional repressor ArsR;protein_id=WP_000008957.1;transl_table=11 NZ_JJLR01000162.1 RefSeq pseudogene 1510 2047 . + . ID=gene-AC57_RS01210;Name=arsB;end_range=2047,.;gbkey=Gene;gene=arsB;gene_biotype=pseudogene;locus_tag=AC57_RS01210;old_locus_tag=AC57_4890;partial=true;pseudo=true NZ_JJLR01000162.1 Protein Homology CDS 1510 2047 . + 0 ID=cds-AC57_RS01210;Parent=gene-AC57_RS01210;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AC57_RS01210;partial=true;product=arsenite/antimonite:H(+) antiporter ArsB;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000163.1 1 3156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000163.1 RefSeq region 1 3156 . + . ID=NZ_JJLR01000163.1:1..3156;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000163.1 RefSeq gene 1 1312 . + . ID=gene-AC57_RS01205;Name=AC57_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01205;old_locus_tag=AC57_4891;partial=true;start_range=.,1 NZ_JJLR01000163.1 Protein Homology CDS 1 1312 . + 1 ID=cds-WP_032285768.1;Parent=gene-AC57_RS01205;Dbxref=GenBank:WP_032285768.1;Name=WP_032285768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308869.1;locus_tag=AC57_RS01205;partial=true;product=phage tail tip domain-containing protein;protein_id=WP_032285768.1;start_range=.,1;transl_table=11 NZ_JJLR01000163.1 RefSeq gene 1382 1981 . + . ID=gene-AC57_RS01200;Name=AC57_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01200;old_locus_tag=AC57_4892 NZ_JJLR01000163.1 Protein Homology CDS 1382 1981 . + 0 ID=cds-WP_001230375.1;Parent=gene-AC57_RS01200;Dbxref=GenBank:WP_001230375.1;Name=WP_001230375.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AC57_RS01200;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001230375.1;transl_table=11 NZ_JJLR01000163.1 RefSeq gene 2046 3156 . + . ID=gene-AC57_RS28310;Name=AC57_RS28310;end_range=3156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28310;partial=true NZ_JJLR01000163.1 Protein Homology CDS 2046 3156 . + 0 ID=cds-WP_187439612.1;Parent=gene-AC57_RS28310;Dbxref=GenBank:WP_187439612.1;Name=WP_187439612.1;end_range=3156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415890.2;locus_tag=AC57_RS28310;partial=true;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_187439612.1;transl_table=11 ##sequence-region NZ_JJLR01000164.1 1 4387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000164.1 RefSeq region 1 4387 . + . ID=NZ_JJLR01000164.1:1..4387;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000164.1 RefSeq pseudogene 1 327 . + . ID=gene-AC57_RS0125720;Name=AC57_RS0125720;end_range=327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125720;old_locus_tag=AC57_4895;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000164.1 Protein Homology CDS 1 327 . + 0 ID=cds-AC57_RS0125720;Parent=gene-AC57_RS0125720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_047234906.1;locus_tag=AC57_RS0125720;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000164.1 RefSeq gene 352 1923 . - . ID=gene-AC57_RS01185;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AC57_RS01185;old_locus_tag=AC57_4896 NZ_JJLR01000164.1 Protein Homology CDS 352 1923 . - 0 ID=cds-WP_032280107.1;Parent=gene-AC57_RS01185;Dbxref=GenBank:WP_032280107.1;Name=WP_032280107.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC57_RS01185;product=IS66 family transposase;protein_id=WP_032280107.1;transl_table=11 NZ_JJLR01000164.1 RefSeq gene 1943 2290 . - . ID=gene-AC57_RS01180;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS01180;old_locus_tag=AC57_4897 NZ_JJLR01000164.1 Protein Homology CDS 1943 2290 . - 0 ID=cds-WP_000624622.1-2;Parent=gene-AC57_RS01180;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC57_RS01180;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLR01000164.1 RefSeq gene 2366 3979 . - . ID=gene-AC57_RS01175;Name=AC57_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01175;old_locus_tag=AC57_4898 NZ_JJLR01000164.1 Protein Homology CDS 2366 3979 . - 0 ID=cds-WP_000080172.1-3;Parent=gene-AC57_RS01175;Dbxref=GenBank:WP_000080172.1;Name=WP_000080172.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS01175;product=IS66-like element ISEc43 family transposase;protein_id=WP_000080172.1;transl_table=11 NZ_JJLR01000164.1 RefSeq gene 4010 4360 . - . ID=gene-AC57_RS01170;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS01170;old_locus_tag=AC57_4899 NZ_JJLR01000164.1 Protein Homology CDS 4010 4360 . - 0 ID=cds-WP_000624688.1-3;Parent=gene-AC57_RS01170;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS01170;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 ##sequence-region NZ_JJLR01000165.1 1 4177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000165.1 RefSeq region 1 4177 . + . ID=NZ_JJLR01000165.1:1..4177;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000165.1 RefSeq gene 1 125 . - . ID=gene-AC57_RS26105;Name=AC57_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26105;old_locus_tag=AC57_4900;partial=true;start_range=.,1 NZ_JJLR01000165.1 Protein Homology CDS 1 125 . - 0 ID=cds-WP_001691668.1;Parent=gene-AC57_RS26105;Dbxref=GenBank:WP_001691668.1;Name=WP_001691668.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS26105;partial=true;product=transposase;protein_id=WP_001691668.1;start_range=.,1;transl_table=11 NZ_JJLR01000165.1 RefSeq gene 340 1491 . + . ID=gene-AC57_RS01165;Name=AC57_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01165;old_locus_tag=AC57_4901 NZ_JJLR01000165.1 Protein Homology CDS 340 1491 . + 0 ID=cds-WP_032285771.1;Parent=gene-AC57_RS01165;Dbxref=GenBank:WP_032285771.1;Name=WP_032285771.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389801.1;locus_tag=AC57_RS01165;product=IS30-like element IS30 family transposase;protein_id=WP_032285771.1;transl_table=11 NZ_JJLR01000165.1 RefSeq pseudogene 1501 1926 . + . ID=gene-AC57_RS0125725;Name=AC57_RS0125725;end_range=1926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125725;partial=true;pseudo=true;start_range=.,1501 NZ_JJLR01000165.1 Protein Homology CDS 1501 1926 . + 0 ID=cds-AC57_RS0125725;Parent=gene-AC57_RS0125725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611483.1;locus_tag=AC57_RS0125725;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1501;transl_table=11 NZ_JJLR01000165.1 RefSeq gene 2599 4107 . + . ID=gene-AC57_RS01160;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AC57_RS01160;old_locus_tag=AC57_4903 NZ_JJLR01000165.1 Protein Homology CDS 2599 4107 . + 0 ID=cds-WP_001189111.1-3;Parent=gene-AC57_RS01160;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS01160;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 ##sequence-region NZ_JJLR01000166.1 1 10919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000166.1 RefSeq region 1 10919 . + . ID=NZ_JJLR01000166.1:1..10919;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000166.1 RefSeq gene 1 103 . + . ID=gene-AC57_RS30905;Name=AC57_RS30905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30905;partial=true;start_range=.,1 NZ_JJLR01000166.1 Protein Homology CDS 1 103 . + 1 ID=cds-WP_024169026.1-3;Parent=gene-AC57_RS30905;Dbxref=GenBank:WP_024169026.1;Name=WP_024169026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS30905;partial=true;product=hypothetical protein;protein_id=WP_024169026.1;start_range=.,1;transl_table=11 NZ_JJLR01000166.1 RefSeq pseudogene 297 461 . - . ID=gene-AC57_RS30090;Name=AC57_RS30090;end_range=461,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30090;old_locus_tag=AC57_4904;partial=true;pseudo=true NZ_JJLR01000166.1 Protein Homology CDS 297 461 . - 0 ID=cds-AC57_RS30090;Parent=gene-AC57_RS30090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=461,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858335.1;locus_tag=AC57_RS30090;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 803 1774 . - . ID=gene-AC57_RS01155;Name=AC57_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01155;old_locus_tag=AC57_4905 NZ_JJLR01000166.1 Protein Homology CDS 803 1774 . - 0 ID=cds-WP_001575734.1;Parent=gene-AC57_RS01155;Dbxref=GenBank:WP_001575734.1;Name=WP_001575734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817027.1;locus_tag=AC57_RS01155;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_001575734.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 1774 2940 . - . ID=gene-AC57_RS01150;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AC57_RS01150;old_locus_tag=AC57_4906 NZ_JJLR01000166.1 Protein Homology CDS 1774 2940 . - 0 ID=cds-WP_001238646.1;Parent=gene-AC57_RS01150;Dbxref=GenBank:WP_001238646.1;Name=WP_001238646.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AC57_RS01150;product=plasmid-partitioning protein SopA;protein_id=WP_001238646.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 3214 4245 . + . ID=gene-AC57_RS0125740;Name=AC57_RS0125740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125740;old_locus_tag=AC57_4908 NZ_JJLR01000166.1 Protein Homology CDS 3214 4245 . + 0 ID=cds-WP_001575732.1;Parent=gene-AC57_RS0125740;Dbxref=GenBank:WP_001575732.1;Name=WP_001575732.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AC57_RS0125740;product=IS630 family transposase;protein_id=WP_001575732.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 4547 5554 . + . ID=gene-AC57_RS01145;Name=AC57_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01145;old_locus_tag=AC57_4909 NZ_JJLR01000166.1 Protein Homology CDS 4547 5554 . + 0 ID=cds-WP_050489072.1;Parent=gene-AC57_RS01145;Dbxref=GenBank:WP_050489072.1;Name=WP_050489072.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014717.6;locus_tag=AC57_RS01145;product=ABC transporter permease;protein_id=WP_050489072.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 5551 6759 . + . ID=gene-AC57_RS01140;Name=AC57_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01140;old_locus_tag=AC57_4910 NZ_JJLR01000166.1 Protein Homology CDS 5551 6759 . + 0 ID=cds-WP_032280034.1;Parent=gene-AC57_RS01140;Dbxref=GenBank:WP_032280034.1;Name=WP_032280034.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=AC57_RS01140;product=TolC family protein;protein_id=WP_032280034.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 6722 7495 . + . ID=gene-AC57_RS01135;Name=AC57_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01135;old_locus_tag=AC57_4911 NZ_JJLR01000166.1 GeneMarkS-2+ CDS 6722 7495 . + 0 ID=cds-WP_143370820.1;Parent=gene-AC57_RS01135;Dbxref=GenBank:WP_143370820.1;Name=WP_143370820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS01135;product=hypothetical protein;protein_id=WP_143370820.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 7488 8120 . + . ID=gene-AC57_RS0125745;Name=AC57_RS0125745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125745;old_locus_tag=AC57_4912 NZ_JJLR01000166.1 Protein Homology CDS 7488 8120 . + 0 ID=cds-WP_032237875.1;Parent=gene-AC57_RS0125745;Dbxref=GenBank:WP_032237875.1;Name=WP_032237875.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575727.1;locus_tag=AC57_RS0125745;product=ATP-binding cassette domain-containing protein;protein_id=WP_032237875.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 8113 9381 . + . ID=gene-AC57_RS30095;Name=AC57_RS30095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30095;old_locus_tag=AC57_4913 NZ_JJLR01000166.1 GeneMarkS-2+ CDS 8113 9381 . + 0 ID=cds-WP_148725162.1;Parent=gene-AC57_RS30095;Dbxref=GenBank:WP_148725162.1;Name=WP_148725162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30095;product=hypothetical protein;protein_id=WP_148725162.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 10230 10598 . + . ID=gene-AC57_RS26110;Name=AC57_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26110 NZ_JJLR01000166.1 GeneMarkS-2+ CDS 10230 10598 . + 0 ID=cds-WP_001575724.1;Parent=gene-AC57_RS26110;Dbxref=GenBank:WP_001575724.1;Name=WP_001575724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS26110;product=hypothetical protein;protein_id=WP_001575724.1;transl_table=11 NZ_JJLR01000166.1 RefSeq gene 10702 10919 . - . ID=gene-AC57_RS01130;Name=AC57_RS01130;end_range=10919,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01130;old_locus_tag=AC57_4915;partial=true NZ_JJLR01000166.1 Protein Homology CDS 10702 10919 . - 2 ID=cds-WP_032285772.1;Parent=gene-AC57_RS01130;Dbxref=GenBank:WP_032285772.1;Name=WP_032285772.1;Ontology_term=GO:0015074;end_range=10919,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS01130;partial=true;product=integrase core domain-containing protein;protein_id=WP_032285772.1;transl_table=11 ##sequence-region NZ_JJLR01000167.1 1 351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000167.1 RefSeq region 1 351 . + . ID=NZ_JJLR01000167.1:1..351;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000167.1 RefSeq gene 37 351 . + . ID=gene-AC57_RS01125;Name=AC57_RS01125;end_range=351,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01125;old_locus_tag=AC57_4916;partial=true NZ_JJLR01000167.1 Protein Homology CDS 37 351 . + 0 ID=cds-WP_001414227.1;Parent=gene-AC57_RS01125;Dbxref=GenBank:WP_001414227.1;Name=WP_001414227.1;end_range=351,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418050.1;locus_tag=AC57_RS01125;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_001414227.1;transl_table=11 ##sequence-region NZ_JJLR01000168.1 1 5415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000168.1 RefSeq region 1 5415 . + . ID=NZ_JJLR01000168.1:1..5415;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000168.1 RefSeq pseudogene 1 279 . - . ID=gene-AC57_RS01120;Name=AC57_RS01120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01120;old_locus_tag=AC57_4917;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000168.1 Protein Homology CDS 1 279 . - 0 ID=cds-AC57_RS01120;Parent=gene-AC57_RS01120;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS01120;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000168.1 RefSeq gene 558 2612 . + . ID=gene-AC57_RS01115;Name=AC57_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01115;old_locus_tag=AC57_4918 NZ_JJLR01000168.1 Protein Homology CDS 558 2612 . + 0 ID=cds-WP_032232411.1;Parent=gene-AC57_RS01115;Dbxref=GenBank:WP_032232411.1;Name=WP_032232411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284083.1;locus_tag=AC57_RS01115;product=DUF6645 domain-containing protein;protein_id=WP_032232411.1;transl_table=11 NZ_JJLR01000168.1 RefSeq gene 2778 2960 . + . ID=gene-AC57_RS01110;Name=AC57_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01110;old_locus_tag=AC57_4919 NZ_JJLR01000168.1 Protein Homology CDS 2778 2960 . + 0 ID=cds-WP_032188762.1;Parent=gene-AC57_RS01110;Dbxref=GenBank:WP_032188762.1;Name=WP_032188762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908619.1;locus_tag=AC57_RS01110;product=DUF1378 family protein;protein_id=WP_032188762.1;transl_table=11 NZ_JJLR01000168.1 RefSeq gene 2996 3250 . + . ID=gene-AC57_RS01105;Name=AC57_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01105;old_locus_tag=AC57_4920 NZ_JJLR01000168.1 Protein Homology CDS 2996 3250 . + 0 ID=cds-WP_032236972.1;Parent=gene-AC57_RS01105;Dbxref=GenBank:WP_032236972.1;Name=WP_032236972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313022.1;locus_tag=AC57_RS01105;product=DUF826 domain-containing protein;protein_id=WP_032236972.1;transl_table=11 NZ_JJLR01000168.1 RefSeq gene 3418 3678 . - . ID=gene-AC57_RS01100;Name=AC57_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01100;old_locus_tag=AC57_4921 NZ_JJLR01000168.1 Protein Homology CDS 3418 3678 . - 0 ID=cds-WP_000571916.1;Parent=gene-AC57_RS01100;Dbxref=GenBank:WP_000571916.1;Name=WP_000571916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571916.1;locus_tag=AC57_RS01100;product=hypothetical protein;protein_id=WP_000571916.1;transl_table=11 NZ_JJLR01000168.1 RefSeq gene 3968 4168 . + . ID=gene-AC57_RS0125760;Name=AC57_RS0125760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125760 NZ_JJLR01000168.1 Protein Homology CDS 3968 4168 . + 0 ID=cds-WP_014334043.1;Parent=gene-AC57_RS0125760;Dbxref=GenBank:WP_014334043.1;Name=WP_014334043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313024.1;locus_tag=AC57_RS0125760;product=Com family DNA-binding transcriptional regulator;protein_id=WP_014334043.1;transl_table=11 NZ_JJLR01000168.1 RefSeq gene 4122 4859 . + . ID=gene-AC57_RS01095;Name=AC57_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01095;old_locus_tag=AC57_4922 NZ_JJLR01000168.1 Protein Homology CDS 4122 4859 . + 0 ID=cds-WP_000528246.1;Parent=gene-AC57_RS01095;Dbxref=GenBank:WP_000528246.1;Name=WP_000528246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313025.1;locus_tag=AC57_RS01095;product=hypothetical protein;protein_id=WP_000528246.1;transl_table=11 NZ_JJLR01000168.1 RefSeq pseudogene 4987 5415 . + . ID=gene-AC57_RS01090;Name=AC57_RS01090;end_range=5415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01090;old_locus_tag=AC57_4923;partial=true;pseudo=true;start_range=.,4987 NZ_JJLR01000168.1 Protein Homology CDS 4987 5415 . + 0 ID=cds-AC57_RS01090;Parent=gene-AC57_RS01090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=5415,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=AC57_RS01090;partial=true;product=phage tail tip protein J-related protein;pseudo=true;start_range=.,4987;transl_table=11 ##sequence-region NZ_JJLR01000169.1 1 321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000169.1 RefSeq region 1 321 . + . ID=NZ_JJLR01000169.1:1..321;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000169.1 RefSeq pseudogene 1 218 . + . ID=gene-AC57_RS01085;Name=AC57_RS01085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01085;old_locus_tag=AC57_4924;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000169.1 Protein Homology CDS 1 218 . + 2 ID=cds-AC57_RS01085;Parent=gene-AC57_RS01085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312171.1;locus_tag=AC57_RS01085;partial=true;product=amino acid ABC transporter ATP-binding protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000170.1 1 1254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000170.1 RefSeq region 1 1254 . + . ID=NZ_JJLR01000170.1:1..1254;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000170.1 RefSeq gene 1 240 . + . ID=gene-AC57_RS01080;Name=AC57_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01080;old_locus_tag=AC57_4925;partial=true;start_range=.,1 NZ_JJLR01000170.1 Protein Homology CDS 1 240 . + 0 ID=cds-WP_001509131.1-2;Parent=gene-AC57_RS01080;Dbxref=GenBank:WP_001509131.1;Name=WP_001509131.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS01080;partial=true;product=IS1 family transposase;protein_id=WP_001509131.1;start_range=.,1;transl_table=11 NZ_JJLR01000170.1 RefSeq pseudogene 244 987 . + . ID=gene-AC57_RS28340;Name=AC57_RS28340;end_range=987,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28340;partial=true;pseudo=true;start_range=.,244 NZ_JJLR01000170.1 Protein Homology CDS 244 987 . + 0 ID=cds-AC57_RS28340;Parent=gene-AC57_RS28340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=987,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417134.2;locus_tag=AC57_RS28340;partial=true;product=AIDA repeat-containing protein;pseudo=true;start_range=.,244;transl_table=11 NZ_JJLR01000170.1 RefSeq gene 976 1254 . - . ID=gene-AC57_RS01075;Name=AC57_RS01075;end_range=1254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01075;old_locus_tag=AC57_4926;partial=true NZ_JJLR01000170.1 Protein Homology CDS 976 1254 . - 0 ID=cds-WP_005129930.1-4;Parent=gene-AC57_RS01075;Dbxref=GenBank:WP_005129930.1;Name=WP_005129930.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1254,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS01075;partial=true;product=IS1 family transposase;protein_id=WP_005129930.1;transl_table=11 ##sequence-region NZ_JJLR01000171.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000171.1 RefSeq region 1 720 . + . ID=NZ_JJLR01000171.1:1..720;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000171.1 RefSeq pseudogene 1 720 . + . ID=gene-AC57_RS29450;Name=AC57_RS29450;end_range=720,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29450;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000171.1 Protein Homology CDS 1 720 . + 0 ID=cds-AC57_RS29450;Parent=gene-AC57_RS29450;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=720,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558160.1;locus_tag=AC57_RS29450;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000172.1 1 1867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000172.1 RefSeq region 1 1867 . + . ID=NZ_JJLR01000172.1:1..1867;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000172.1 RefSeq gene 31 1644 . - . ID=gene-AC57_RS01070;Name=AC57_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01070;old_locus_tag=AC57_4929 NZ_JJLR01000172.1 Protein Homology CDS 31 1644 . - 0 ID=cds-WP_032285709.1-2;Parent=gene-AC57_RS01070;Dbxref=GenBank:WP_032285709.1;Name=WP_032285709.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AC57_RS01070;product=IS66-like element ISEc23 family transposase;protein_id=WP_032285709.1;transl_table=11 NZ_JJLR01000172.1 RefSeq gene 1743 1867 . + . ID=gene-AC57_RS28355;Name=AC57_RS28355;end_range=1867,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28355;old_locus_tag=AC57_4930;partial=true NZ_JJLR01000172.1 Protein Homology CDS 1743 1867 . + 0 ID=cds-WP_001691668.1-2;Parent=gene-AC57_RS28355;Dbxref=GenBank:WP_001691668.1;Name=WP_001691668.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1867,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS28355;partial=true;product=transposase;protein_id=WP_001691668.1;transl_table=11 ##sequence-region NZ_JJLR01000173.1 1 1212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000173.1 RefSeq region 1 1212 . + . ID=NZ_JJLR01000173.1:1..1212;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000173.1 RefSeq gene 1 251 . - . ID=gene-AC57_RS0125770;Name=AC57_RS0125770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125770;old_locus_tag=AC57_4931;partial=true;start_range=.,1 NZ_JJLR01000173.1 Protein Homology CDS 1 251 . - 0 ID=cds-WP_032285774.1;Parent=gene-AC57_RS0125770;Dbxref=GenBank:WP_032285774.1;Name=WP_032285774.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS0125770;partial=true;product=transposase;protein_id=WP_032285774.1;start_range=.,1;transl_table=11 NZ_JJLR01000173.1 RefSeq pseudogene 304 522 . + . ID=gene-AC57_RS28365;Name=AC57_RS28365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28365;partial=true;pseudo=true;start_range=.,304 NZ_JJLR01000173.1 Protein Homology CDS 304 522 . + 0 ID=cds-AC57_RS28365;Parent=gene-AC57_RS28365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=AC57_RS28365;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,304;transl_table=11 NZ_JJLR01000173.1 RefSeq gene 540 1212 . + . ID=gene-AC57_RS01065;Name=AC57_RS01065;end_range=1212,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01065;old_locus_tag=AC57_4932;partial=true NZ_JJLR01000173.1 Protein Homology CDS 540 1212 . + 0 ID=cds-WP_032285775.1;Parent=gene-AC57_RS01065;Dbxref=GenBank:WP_032285775.1;Name=WP_032285775.1;end_range=1212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC57_RS01065;partial=true;product=IS66 family transposase;protein_id=WP_032285775.1;transl_table=11 ##sequence-region NZ_JJLR01000174.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000174.1 RefSeq region 1 370 . + . ID=NZ_JJLR01000174.1:1..370;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000174.1 RefSeq gene 1 370 . + . ID=gene-AC57_RS01060;Name=AC57_RS01060;end_range=370,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01060;old_locus_tag=AC57_4933;partial=true;start_range=.,1 NZ_JJLR01000174.1 Protein Homology CDS 1 370 . + 0 ID=cds-WP_249401515.1;Parent=gene-AC57_RS01060;Dbxref=GenBank:WP_249401515.1;Name=WP_249401515.1;Ontology_term=GO:0044384;end_range=370,.;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AC57_RS01060;partial=true;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_249401515.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000175.1 1 514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000175.1 RefSeq region 1 514 . + . ID=NZ_JJLR01000175.1:1..514;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000175.1 RefSeq pseudogene 1 243 . - . ID=gene-AC57_RS01055;Name=AC57_RS01055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01055;old_locus_tag=AC57_4934;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000175.1 Protein Homology CDS 1 243 . - 0 ID=cds-AC57_RS01055;Parent=gene-AC57_RS01055;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS01055;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000175.1 RefSeq pseudogene 300 514 . + . ID=gene-AC57_RS28370;Name=AC57_RS28370;end_range=514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28370;old_locus_tag=AC57_4935;partial=true;pseudo=true;start_range=.,300 NZ_JJLR01000175.1 Protein Homology CDS 300 514 . + 0 ID=cds-AC57_RS28370;Parent=gene-AC57_RS28370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS28370;partial=true;product=hypothetical protein;pseudo=true;start_range=.,300;transl_table=11 ##sequence-region NZ_JJLR01000176.1 1 1783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000176.1 RefSeq region 1 1783 . + . ID=NZ_JJLR01000176.1:1..1783;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000176.1 RefSeq pseudogene 1 325 . + . ID=gene-AC57_RS01050;Name=AC57_RS01050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01050;old_locus_tag=AC57_4936;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000176.1 Protein Homology CDS 1 325 . + 1 ID=cds-AC57_RS01050;Parent=gene-AC57_RS01050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS01050;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000176.1 RefSeq pseudogene 341 442 . - . ID=gene-AC57_RS31310;Name=AC57_RS31310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31310;partial=true;pseudo=true;start_range=.,341 NZ_JJLR01000176.1 Protein Homology CDS 341 442 . - 0 ID=cds-AC57_RS31310;Parent=gene-AC57_RS31310;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417797.1;locus_tag=AC57_RS31310;partial=true;product=hypothetical protein;pseudo=true;start_range=.,341;transl_table=11 NZ_JJLR01000176.1 RefSeq gene 734 1783 . - . ID=gene-AC57_RS01045;Name=tuf;end_range=1783,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AC57_RS01045;old_locus_tag=AC57_4937;partial=true NZ_JJLR01000176.1 Protein Homology CDS 734 1783 . - 0 ID=cds-WP_001416933.1;Parent=gene-AC57_RS01045;Dbxref=GenBank:WP_001416933.1;Name=WP_001416933.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1783,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC57_RS01045;partial=true;product=elongation factor Tu;protein_id=WP_001416933.1;transl_table=11 ##sequence-region NZ_JJLR01000177.1 1 1782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000177.1 RefSeq region 1 1782 . + . ID=NZ_JJLR01000177.1:1..1782;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000177.1 RefSeq pseudogene 24 242 . - . ID=gene-AC57_RS01040;Name=AC57_RS01040;end_range=242,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01040;old_locus_tag=AC57_4938;partial=true;pseudo=true NZ_JJLR01000177.1 Protein Homology CDS 24 242 . - 0 ID=cds-AC57_RS01040;Parent=gene-AC57_RS01040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=242,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS01040;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000177.1 RefSeq gene 326 751 . + . ID=gene-AC57_RS01035;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS01035;old_locus_tag=AC57_4939 NZ_JJLR01000177.1 Protein Homology CDS 326 751 . + 0 ID=cds-WP_000422760.1;Parent=gene-AC57_RS01035;Dbxref=GenBank:WP_000422760.1;Name=WP_000422760.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC57_RS01035;product=IS66-like element accessory protein TnpA;protein_id=WP_000422760.1;transl_table=11 NZ_JJLR01000177.1 RefSeq pseudogene 748 822 . + . ID=gene-AC57_RS30910;Name=AC57_RS30910;end_range=822,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30910;partial=true;pseudo=true NZ_JJLR01000177.1 Protein Homology CDS 748 822 . + 0 ID=cds-AC57_RS30910;Parent=gene-AC57_RS30910;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=822,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS30910;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 NZ_JJLR01000177.1 RefSeq gene 1051 1233 . - . ID=gene-AC57_RS01030;Name=AC57_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01030;old_locus_tag=AC57_4940 NZ_JJLR01000177.1 Protein Homology CDS 1051 1233 . - 0 ID=cds-WP_000282125.1;Parent=gene-AC57_RS01030;Dbxref=GenBank:WP_000282125.1;Name=WP_000282125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309421.1;locus_tag=AC57_RS01030;product=hypothetical protein;protein_id=WP_000282125.1;transl_table=11 NZ_JJLR01000177.1 RefSeq pseudogene 1497 1782 . + . ID=gene-AC57_RS01025;Name=AC57_RS01025;end_range=1782,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01025;old_locus_tag=AC57_4941;partial=true;pseudo=true NZ_JJLR01000177.1 Protein Homology CDS 1497 1782 . + 0 ID=cds-AC57_RS01025;Parent=gene-AC57_RS01025;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS01025;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000178.1 1 666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000178.1 RefSeq region 1 666 . + . ID=NZ_JJLR01000178.1:1..666;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000178.1 RefSeq pseudogene 1 208 . - . ID=gene-AC57_RS01020;Name=AC57_RS01020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS01020;old_locus_tag=AC57_4942;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000178.1 Protein Homology CDS 1 208 . - 0 ID=cds-AC57_RS01020;Parent=gene-AC57_RS01020;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309807.1;locus_tag=AC57_RS01020;partial=true;product=site-specific DNA-methyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000178.1 RefSeq gene 358 555 . - . ID=gene-AC57_RS0125780;Name=AC57_RS0125780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125780;old_locus_tag=AC57_4943 NZ_JJLR01000178.1 Protein Homology CDS 358 555 . - 0 ID=cds-WP_044866933.1;Parent=gene-AC57_RS0125780;Dbxref=GenBank:WP_044866933.1;Name=WP_044866933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AC57_RS0125780;product=hypothetical protein;protein_id=WP_044866933.1;transl_table=11 ##sequence-region NZ_JJLR01000179.1 1 8484 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000179.1 RefSeq region 1 8484 . + . ID=NZ_JJLR01000179.1:1..8484;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000179.1 RefSeq gene 1 1244 . - . ID=gene-AC57_RS01015;Name=AC57_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01015;old_locus_tag=AC57_4944;partial=true;start_range=.,1 NZ_JJLR01000179.1 Protein Homology CDS 1 1244 . - 0 ID=cds-WP_032266535.1;Parent=gene-AC57_RS01015;Dbxref=GenBank:WP_032266535.1;Name=WP_032266535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208608.1;locus_tag=AC57_RS01015;partial=true;product=DUF3987 domain-containing protein;protein_id=WP_032266535.1;start_range=.,1;transl_table=11 NZ_JJLR01000179.1 RefSeq gene 1219 1506 . - . ID=gene-AC57_RS01010;Name=AC57_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01010;old_locus_tag=AC57_4945 NZ_JJLR01000179.1 Protein Homology CDS 1219 1506 . - 0 ID=cds-WP_000070932.1;Parent=gene-AC57_RS01010;Dbxref=GenBank:WP_000070932.1;Name=WP_000070932.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000070930.1;locus_tag=AC57_RS01010;product=helix-turn-helix transcriptional regulator;protein_id=WP_000070932.1;transl_table=11 NZ_JJLR01000179.1 RefSeq gene 1607 3442 . + . ID=gene-AC57_RS01005;Name=AC57_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01005;old_locus_tag=AC57_4946 NZ_JJLR01000179.1 Protein Homology CDS 1607 3442 . + 0 ID=cds-WP_001258866.1;Parent=gene-AC57_RS01005;Dbxref=GenBank:WP_001258866.1;Name=WP_001258866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001258873.1;locus_tag=AC57_RS01005;product=hypothetical protein;protein_id=WP_001258866.1;transl_table=11 NZ_JJLR01000179.1 RefSeq gene 4779 5342 . + . ID=gene-AC57_RS01000;Name=AC57_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS01000;old_locus_tag=AC57_4947 NZ_JJLR01000179.1 Protein Homology CDS 4779 5342 . + 0 ID=cds-WP_000282072.1;Parent=gene-AC57_RS01000;Dbxref=GenBank:WP_000282072.1;Name=WP_000282072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309331.1;locus_tag=AC57_RS01000;product=inovirus-type Gp2 protein;protein_id=WP_000282072.1;transl_table=11 NZ_JJLR01000179.1 RefSeq gene 5497 7857 . + . ID=gene-AC57_RS00995;Name=AC57_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00995;old_locus_tag=AC57_4948 NZ_JJLR01000179.1 Protein Homology CDS 5497 7857 . + 0 ID=cds-WP_032253860.1;Parent=gene-AC57_RS00995;Dbxref=GenBank:WP_032253860.1;Name=WP_032253860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233439.1;locus_tag=AC57_RS00995;product=TOTE conflict system archaeo-eukaryotic primase domain-containing protein;protein_id=WP_032253860.1;transl_table=11 NZ_JJLR01000179.1 RefSeq gene 7875 8063 . - . ID=gene-AC57_RS00990;Name=AC57_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00990;old_locus_tag=AC57_4949 NZ_JJLR01000179.1 Protein Homology CDS 7875 8063 . - 0 ID=cds-WP_000035067.1;Parent=gene-AC57_RS00990;Dbxref=GenBank:WP_000035067.1;Name=WP_000035067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035067.1;locus_tag=AC57_RS00990;product=hypothetical protein;protein_id=WP_000035067.1;transl_table=11 NZ_JJLR01000179.1 RefSeq gene 8130 8484 . - . ID=gene-AC57_RS00985;Name=AC57_RS00985;end_range=8484,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00985;old_locus_tag=AC57_4950;partial=true NZ_JJLR01000179.1 Protein Homology CDS 8130 8484 . - 1 ID=cds-WP_000352274.1;Parent=gene-AC57_RS00985;Dbxref=GenBank:WP_000352274.1;Name=WP_000352274.1;end_range=8484,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC57_RS00985;partial=true;product=IS66 family transposase;protein_id=WP_000352274.1;transl_table=11 ##sequence-region NZ_JJLR01000180.1 1 724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000180.1 RefSeq region 1 724 . + . ID=NZ_JJLR01000180.1:1..724;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000180.1 RefSeq pseudogene 1 262 . - . ID=gene-AC57_RS00980;Name=AC57_RS00980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00980;old_locus_tag=AC57_4951;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000180.1 Protein Homology CDS 1 262 . - 0 ID=cds-AC57_RS00980;Parent=gene-AC57_RS00980;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AC57_RS00980;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000180.1 RefSeq gene 293 643 . - . ID=gene-AC57_RS00975;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00975;old_locus_tag=AC57_4952 NZ_JJLR01000180.1 Protein Homology CDS 293 643 . - 0 ID=cds-WP_000624722.1-3;Parent=gene-AC57_RS00975;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC57_RS00975;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLR01000180.1 RefSeq pseudogene 640 724 . - . ID=gene-AC57_RS28375;Name=AC57_RS28375;end_range=724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28375;partial=true;pseudo=true NZ_JJLR01000180.1 Protein Homology CDS 640 724 . - 1 ID=cds-AC57_RS28375;Parent=gene-AC57_RS28375;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC57_RS28375;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000181.1 1 2877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000181.1 RefSeq region 1 2877 . + . ID=NZ_JJLR01000181.1:1..2877;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000181.1 RefSeq gene 19 1194 . + . ID=gene-AC57_RS00970;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC57_RS00970;old_locus_tag=AC57_4953 NZ_JJLR01000181.1 Protein Homology CDS 19 1194 . + 0 ID=cds-WP_000184541.1-2;Parent=gene-AC57_RS00970;Dbxref=GenBank:WP_000184541.1;Name=WP_000184541.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC57_RS00970;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_000184541.1;transl_table=11 NZ_JJLR01000181.1 RefSeq gene 1348 1422 . - . ID=gene-AC57_RS00965;Name=AC57_RS00965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00965;old_locus_tag=AC57_4955 NZ_JJLR01000181.1 tRNAscan-SE tRNA 1348 1422 . - . ID=rna-AC57_RS00965;Parent=gene-AC57_RS00965;anticodon=(pos:complement(1388..1390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00965;product=tRNA-Gln NZ_JJLR01000181.1 tRNAscan-SE exon 1348 1422 . - . ID=exon-AC57_RS00965-1;Parent=rna-AC57_RS00965;anticodon=(pos:complement(1388..1390));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00965;product=tRNA-Gln NZ_JJLR01000181.1 RefSeq gene 1470 1546 . - . ID=gene-AC57_RS00960;Name=AC57_RS00960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00960;old_locus_tag=AC57_4956 NZ_JJLR01000181.1 tRNAscan-SE tRNA 1470 1546 . - . ID=rna-AC57_RS00960;Parent=gene-AC57_RS00960;anticodon=(pos:complement(1510..1512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00960;product=tRNA-Met NZ_JJLR01000181.1 tRNAscan-SE exon 1470 1546 . - . ID=exon-AC57_RS00960-1;Parent=rna-AC57_RS00960;anticodon=(pos:complement(1510..1512));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00960;product=tRNA-Met NZ_JJLR01000181.1 RefSeq gene 1562 1636 . - . ID=gene-AC57_RS00955;Name=AC57_RS00955;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00955;old_locus_tag=AC57_4957 NZ_JJLR01000181.1 tRNAscan-SE tRNA 1562 1636 . - . ID=rna-AC57_RS00955;Parent=gene-AC57_RS00955;anticodon=(pos:complement(1602..1604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00955;product=tRNA-Gln NZ_JJLR01000181.1 tRNAscan-SE exon 1562 1636 . - . ID=exon-AC57_RS00955-1;Parent=rna-AC57_RS00955;anticodon=(pos:complement(1602..1604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00955;product=tRNA-Gln NZ_JJLR01000181.1 RefSeq gene 1671 1745 . - . ID=gene-AC57_RS00950;Name=AC57_RS00950;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00950;old_locus_tag=AC57_4958 NZ_JJLR01000181.1 tRNAscan-SE tRNA 1671 1745 . - . ID=rna-AC57_RS00950;Parent=gene-AC57_RS00950;anticodon=(pos:complement(1711..1713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00950;product=tRNA-Gln NZ_JJLR01000181.1 tRNAscan-SE exon 1671 1745 . - . ID=exon-AC57_RS00950-1;Parent=rna-AC57_RS00950;anticodon=(pos:complement(1711..1713));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00950;product=tRNA-Gln NZ_JJLR01000181.1 RefSeq gene 1769 1853 . - . ID=gene-AC57_RS00945;Name=AC57_RS00945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00945;old_locus_tag=AC57_4959 NZ_JJLR01000181.1 tRNAscan-SE tRNA 1769 1853 . - . ID=rna-AC57_RS00945;Parent=gene-AC57_RS00945;anticodon=(pos:complement(1817..1819));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00945;product=tRNA-Leu NZ_JJLR01000181.1 tRNAscan-SE exon 1769 1853 . - . ID=exon-AC57_RS00945-1;Parent=rna-AC57_RS00945;anticodon=(pos:complement(1817..1819));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00945;product=tRNA-Leu NZ_JJLR01000181.1 RefSeq gene 1864 1940 . - . ID=gene-AC57_RS00940;Name=AC57_RS00940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00940;old_locus_tag=AC57_4960 NZ_JJLR01000181.1 tRNAscan-SE tRNA 1864 1940 . - . ID=rna-AC57_RS00940;Parent=gene-AC57_RS00940;anticodon=(pos:complement(1904..1906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00940;product=tRNA-Met NZ_JJLR01000181.1 tRNAscan-SE exon 1864 1940 . - . ID=exon-AC57_RS00940-1;Parent=rna-AC57_RS00940;anticodon=(pos:complement(1904..1906));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00940;product=tRNA-Met NZ_JJLR01000181.1 RefSeq gene 2320 2877 . - . ID=gene-AC57_RS00935;Name=AC57_RS00935;end_range=2877,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00935;old_locus_tag=AC57_4961;partial=true NZ_JJLR01000181.1 Protein Homology CDS 2320 2877 . - 0 ID=cds-WP_032202148.1;Parent=gene-AC57_RS00935;Dbxref=GenBank:WP_032202148.1;Name=WP_032202148.1;Ontology_term=GO:0006529,GO:0004066;end_range=2877,.;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AC57_RS00935;partial=true;product=asparagine synthase-related protein;protein_id=WP_032202148.1;transl_table=11 ##sequence-region NZ_JJLR01000182.1 1 1608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000182.1 RefSeq region 1 1608 . + . ID=NZ_JJLR01000182.1:1..1608;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000182.1 RefSeq pseudogene 1 1608 . + . ID=gene-AC57_RS00930;Name=rhsC;end_range=1608,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AC57_RS00930;old_locus_tag=AC57_4962;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000182.1 Protein Homology CDS 1 1608 . + 0 ID=cds-AC57_RS00930;Parent=gene-AC57_RS00930;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1608,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC57_RS00930;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000183.1 1 9575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000183.1 RefSeq region 1 9575 . + . ID=NZ_JJLR01000183.1:1..9575;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000183.1 RefSeq gene 62 709 . + . ID=gene-AC57_RS00925;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS00925;old_locus_tag=AC57_4963 NZ_JJLR01000183.1 Protein Homology CDS 62 709 . + 0 ID=cds-WP_032280122.1-2;Parent=gene-AC57_RS00925;Dbxref=GenBank:WP_032280122.1;Name=WP_032280122.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355812.1;locus_tag=AC57_RS00925;product=IS66-like element accessory protein TnpA;protein_id=WP_032280122.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 709 1056 . + . ID=gene-AC57_RS00920;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00920;old_locus_tag=AC57_4964 NZ_JJLR01000183.1 Protein Homology CDS 709 1056 . + 0 ID=cds-WP_000624622.1-3;Parent=gene-AC57_RS00920;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC57_RS00920;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 1076 2647 . + . ID=gene-AC57_RS00915;Name=AC57_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00915;old_locus_tag=AC57_4965 NZ_JJLR01000183.1 Protein Homology CDS 1076 2647 . + 0 ID=cds-WP_032280090.1-2;Parent=gene-AC57_RS00915;Dbxref=GenBank:WP_032280090.1;Name=WP_032280090.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC57_RS00915;product=IS66-like element ISCro1 family transposase;protein_id=WP_032280090.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 2685 3911 . + . ID=gene-AC57_RS00910;Name=AC57_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00910;old_locus_tag=AC57_4966 NZ_JJLR01000183.1 Protein Homology CDS 2685 3911 . + 0 ID=cds-WP_000655922.1;Parent=gene-AC57_RS00910;Dbxref=GenBank:WP_000655922.1;Name=WP_000655922.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230898.1;locus_tag=AC57_RS00910;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_000655922.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 3895 4722 . + . ID=gene-AC57_RS0125785;Name=AC57_RS0125785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125785 NZ_JJLR01000183.1 Protein Homology CDS 3895 4722 . + 0 ID=cds-WP_000154003.1;Parent=gene-AC57_RS0125785;Dbxref=GenBank:WP_000154003.1;Name=WP_000154003.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000154003.1;locus_tag=AC57_RS0125785;product=HAD-IIB family hydrolase;protein_id=WP_000154003.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 4725 5741 . + . ID=gene-AC57_RS00905;Name=AC57_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00905;old_locus_tag=AC57_4968 NZ_JJLR01000183.1 Protein Homology CDS 4725 5741 . + 0 ID=cds-WP_032280058.1;Parent=gene-AC57_RS00905;Dbxref=GenBank:WP_032280058.1;Name=WP_032280058.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004155535.1;locus_tag=AC57_RS00905;product=Gfo/Idh/MocA family protein;protein_id=WP_032280058.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 5743 6012 . + . ID=gene-AC57_RS00900;Name=AC57_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00900;old_locus_tag=AC57_4969 NZ_JJLR01000183.1 Protein Homology CDS 5743 6012 . + 0 ID=cds-WP_032280057.1;Parent=gene-AC57_RS00900;Dbxref=GenBank:WP_032280057.1;Name=WP_032280057.1;Ontology_term=GO:0051119;gbkey=CDS;go_function=sugar transmembrane transporter activity|0051119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004168572.1;locus_tag=AC57_RS00900;product=SemiSWEET transporter;protein_id=WP_032280057.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 6009 7541 . + . ID=gene-AC57_RS00895;Name=AC57_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00895;old_locus_tag=AC57_4970 NZ_JJLR01000183.1 Protein Homology CDS 6009 7541 . + 0 ID=cds-WP_032285781.1;Parent=gene-AC57_RS00895;Dbxref=GenBank:WP_032285781.1;Name=WP_032285781.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017348.1;locus_tag=AC57_RS00895;product=flavin-containing monooxygenase;protein_id=WP_032285781.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 7573 8025 . - . ID=gene-AC57_RS00890;Name=AC57_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00890;old_locus_tag=AC57_4971 NZ_JJLR01000183.1 Protein Homology CDS 7573 8025 . - 0 ID=cds-WP_000670960.1;Parent=gene-AC57_RS00890;Dbxref=GenBank:WP_000670960.1;Name=WP_000670960.1;Ontology_term=GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000670962.1;locus_tag=AC57_RS00890;product=acyltransferase;protein_id=WP_000670960.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 8354 8587 . + . ID=gene-AC57_RS00885;Name=AC57_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00885;old_locus_tag=AC57_4972 NZ_JJLR01000183.1 Protein Homology CDS 8354 8587 . + 0 ID=cds-WP_032280055.1;Parent=gene-AC57_RS00885;Dbxref=GenBank:WP_032280055.1;Name=WP_032280055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343103.1;locus_tag=AC57_RS00885;product=hypothetical protein;protein_id=WP_032280055.1;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 8587 9177 . + . ID=gene-AC57_RS00880;Name=AC57_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00880;old_locus_tag=AC57_4973 NZ_JJLR01000183.1 Protein Homology CDS 8587 9177 . + 0 ID=cds-WP_032280054.1;Parent=gene-AC57_RS00880;Dbxref=GenBank:WP_032280054.1;Name=WP_032280054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001545742.1;locus_tag=AC57_RS00880;product=hypothetical protein;protein_id=WP_032280054.1;transl_table=11 NZ_JJLR01000183.1 RefSeq pseudogene 9299 9376 . + . ID=gene-AC57_RS30915;Name=AC57_RS30915;end_range=9376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30915;partial=true;pseudo=true NZ_JJLR01000183.1 Protein Homology CDS 9299 9376 . + 0 ID=cds-AC57_RS30915;Parent=gene-AC57_RS30915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9376,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229711.1;locus_tag=AC57_RS30915;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000183.1 RefSeq gene 9392 9575 . - . ID=gene-AC57_RS28390;Name=AC57_RS28390;end_range=9575,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28390;old_locus_tag=AC57_4974;partial=true NZ_JJLR01000183.1 Protein Homology CDS 9392 9575 . - 1 ID=cds-WP_000314040.1;Parent=gene-AC57_RS28390;Dbxref=GenBank:WP_000314040.1;Name=WP_000314040.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=9575,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS28390;partial=true;product=IS1 family transposase;protein_id=WP_000314040.1;transl_table=11 ##sequence-region NZ_JJLR01000184.1 1 2559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000184.1 RefSeq region 1 2559 . + . ID=NZ_JJLR01000184.1:1..2559;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000184.1 RefSeq pseudogene 1 1284 . - . ID=gene-AC57_RS00875;Name=rhsD;gbkey=Gene;gene=rhsD;gene_biotype=pseudogene;locus_tag=AC57_RS00875;old_locus_tag=AC57_4975;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000184.1 Protein Homology CDS 1 1284 . - 0 ID=cds-AC57_RS00875;Parent=gene-AC57_RS00875;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=rhsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AC57_RS00875;partial=true;product=rhs element protein RhsD;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000184.1 RefSeq gene 1351 2559 . - . ID=gene-AC57_RS00870;Name=tssI;end_range=2559,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=AC57_RS00870;old_locus_tag=AC57_4976;partial=true NZ_JJLR01000184.1 Protein Homology CDS 1351 2559 . - 0 ID=cds-WP_032285783.1;Parent=gene-AC57_RS00870;Dbxref=GenBank:WP_032285783.1;Name=WP_032285783.1;Ontology_term=GO:0033103;end_range=2559,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310087.1;locus_tag=AC57_RS00870;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_032285783.1;transl_table=11 ##sequence-region NZ_JJLR01000185.1 1 844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000185.1 RefSeq region 1 844 . + . ID=NZ_JJLR01000185.1:1..844;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000185.1 RefSeq pseudogene 1 282 . - . ID=gene-AC57_RS00865;Name=AC57_RS00865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00865;old_locus_tag=AC57_4977;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000185.1 Protein Homology CDS 1 282 . - 0 ID=cds-AC57_RS00865;Parent=gene-AC57_RS00865;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS00865;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000185.1 RefSeq gene 647 844 . + . ID=gene-AC57_RS00860;Name=AC57_RS00860;end_range=844,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00860;old_locus_tag=AC57_4978;partial=true NZ_JJLR01000185.1 Protein Homology CDS 647 844 . + 0 ID=cds-WP_001666717.1;Parent=gene-AC57_RS00860;Dbxref=GenBank:WP_001666717.1;Name=WP_001666717.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=844,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS00860;partial=true;product=transposase;protein_id=WP_001666717.1;transl_table=11 ##sequence-region NZ_JJLR01000186.1 1 1995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000186.1 RefSeq region 1 1995 . + . ID=NZ_JJLR01000186.1:1..1995;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000186.1 RefSeq gene 109 1011 . + . ID=gene-AC57_RS00855;Name=AC57_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00855;old_locus_tag=AC57_4979 NZ_JJLR01000186.1 Protein Homology CDS 109 1011 . + 0 ID=cds-WP_000140568.1;Parent=gene-AC57_RS00855;Dbxref=GenBank:WP_000140568.1;Name=WP_000140568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311156.1;locus_tag=AC57_RS00855;product=ISNCY family transposase;protein_id=WP_000140568.1;transl_table=11 NZ_JJLR01000186.1 RefSeq gene 1052 1855 . - . ID=gene-AC57_RS00850;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=AC57_RS00850;old_locus_tag=AC57_4980 NZ_JJLR01000186.1 Protein Homology CDS 1052 1855 . - 0 ID=cds-WP_000992954.1-2;Parent=gene-AC57_RS00850;Dbxref=GenBank:WP_000992954.1;Name=WP_000992954.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416748.1;locus_tag=AC57_RS00850;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_000992954.1;transl_table=11 NZ_JJLR01000186.1 RefSeq pseudogene 1873 1995 . - . ID=gene-AC57_RS29465;Name=AC57_RS29465;end_range=1995,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29465;old_locus_tag=AC57_4981;partial=true;pseudo=true NZ_JJLR01000186.1 Protein Homology CDS 1873 1995 . - 0 ID=cds-AC57_RS29465;Parent=gene-AC57_RS29465;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416749.4;locus_tag=AC57_RS29465;partial=true;product=MFS transporter;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000187.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000187.1 RefSeq region 1 2047 . + . ID=NZ_JJLR01000187.1:1..2047;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000187.1 RefSeq gene 1 323 . - . ID=gene-AC57_RS00845;Name=AC57_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00845;old_locus_tag=AC57_4982;partial=true;start_range=.,1 NZ_JJLR01000187.1 Protein Homology CDS 1 323 . - 0 ID=cds-WP_032285785.1;Parent=gene-AC57_RS00845;Dbxref=GenBank:WP_032285785.1;Name=WP_032285785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=AC57_RS00845;partial=true;product=class II aldolase/adducin family protein;protein_id=WP_032285785.1;start_range=.,1;transl_table=11 NZ_JJLR01000187.1 RefSeq gene 608 2047 . - . ID=gene-AC57_RS00840;Name=araA;end_range=2047,.;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AC57_RS00840;old_locus_tag=AC57_4983;partial=true NZ_JJLR01000187.1 Protein Homology CDS 608 2047 . - 0 ID=cds-WP_032285784.1;Parent=gene-AC57_RS00840;Dbxref=GenBank:WP_032285784.1;Name=WP_032285784.1;Ontology_term=GO:0005996,GO:0008733;end_range=2047,.;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AC57_RS00840;partial=true;product=L-arabinose isomerase;protein_id=WP_032285784.1;transl_table=11 ##sequence-region NZ_JJLR01000188.1 1 3456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000188.1 RefSeq region 1 3456 . + . ID=NZ_JJLR01000188.1:1..3456;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000188.1 RefSeq gene 1 222 . + . ID=gene-AC57_RS00835;Name=AC57_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00835;old_locus_tag=AC57_4984;partial=true;start_range=.,1 NZ_JJLR01000188.1 Protein Homology CDS 1 222 . + 0 ID=cds-WP_001647012.1;Parent=gene-AC57_RS00835;Dbxref=GenBank:WP_001647012.1;Name=WP_001647012.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS00835;partial=true;product=IS1 family transposase;protein_id=WP_001647012.1;start_range=.,1;transl_table=11 NZ_JJLR01000188.1 RefSeq pseudogene 466 1205 . + . ID=gene-AC57_RS30110;Name=AC57_RS30110;end_range=1205,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30110;partial=true;pseudo=true NZ_JJLR01000188.1 Protein Homology CDS 466 1205 . + 0 ID=cds-AC57_RS30110;Parent=gene-AC57_RS30110;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;end_range=1205,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS30110;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLR01000188.1 cmsearch sequence_feature 747 863 . + . ID=id-AC57_RS30110;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS30110;pseudo=true NZ_JJLR01000188.1 RefSeq gene 1878 3386 . + . ID=gene-AC57_RS00820;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AC57_RS00820;old_locus_tag=AC57_4988 NZ_JJLR01000188.1 Protein Homology CDS 1878 3386 . + 0 ID=cds-WP_001189111.1-4;Parent=gene-AC57_RS00820;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS00820;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 ##sequence-region NZ_JJLR01000189.1 1 2293 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000189.1 RefSeq region 1 2293 . + . ID=NZ_JJLR01000189.1:1..2293;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000189.1 RefSeq gene 1 2293 . + . ID=gene-AC57_RS00810;Name=AC57_RS00810;end_range=2293,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00810;old_locus_tag=AC57_4990;partial=true;start_range=.,1 NZ_JJLR01000189.1 Protein Homology CDS 1 2293 . + 1 ID=cds-WP_249401516.1;Parent=gene-AC57_RS00810;Dbxref=GenBank:WP_249401516.1;Name=WP_249401516.1;Ontology_term=GO:0019062,GO:0046718;end_range=2293,.;gbkey=CDS;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014639872.1;locus_tag=AC57_RS00810;partial=true;product=phage tail protein;protein_id=WP_249401516.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000190.1 1 4070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000190.1 RefSeq region 1 4070 . + . ID=NZ_JJLR01000190.1:1..4070;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000190.1 RefSeq pseudogene 1 253 . - . ID=gene-AC57_RS00805;Name=AC57_RS00805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00805;old_locus_tag=AC57_4991;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000190.1 Protein Homology CDS 1 253 . - 0 ID=cds-AC57_RS00805;Parent=gene-AC57_RS00805;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC57_RS00805;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000190.1 RefSeq gene 382 457 . - . ID=gene-AC57_RS00800;Name=AC57_RS00800;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00800;old_locus_tag=AC57_4992 NZ_JJLR01000190.1 tRNAscan-SE tRNA 382 457 . - . ID=rna-AC57_RS00800;Parent=gene-AC57_RS00800;anticodon=(pos:complement(422..424));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00800;product=tRNA-Ile NZ_JJLR01000190.1 tRNAscan-SE exon 382 457 . - . ID=exon-AC57_RS00800-1;Parent=rna-AC57_RS00800;anticodon=(pos:complement(422..424));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00800;product=tRNA-Ile NZ_JJLR01000190.1 RefSeq gene 507 1556 . - . ID=gene-AC57_RS00795;Name=AC57_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00795;old_locus_tag=AC57_4993 NZ_JJLR01000190.1 Protein Homology CDS 507 1556 . - 0 ID=cds-WP_000935515.1;Parent=gene-AC57_RS00795;Dbxref=GenBank:WP_000935515.1;Name=WP_000935515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575625.1;locus_tag=AC57_RS00795;product=DNA-methyltransferase;protein_id=WP_000935515.1;transl_table=11 NZ_JJLR01000190.1 RefSeq gene 1707 1904 . - . ID=gene-AC57_RS00790;Name=AC57_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00790;old_locus_tag=AC57_4994 NZ_JJLR01000190.1 Protein Homology CDS 1707 1904 . - 0 ID=cds-WP_000917768.1;Parent=gene-AC57_RS00790;Dbxref=GenBank:WP_000917768.1;Name=WP_000917768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AC57_RS00790;product=hypothetical protein;protein_id=WP_000917768.1;transl_table=11 NZ_JJLR01000190.1 RefSeq gene 2131 2952 . - . ID=gene-AC57_RS00785;Name=AC57_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00785;old_locus_tag=AC57_4995 NZ_JJLR01000190.1 Protein Homology CDS 2131 2952 . - 0 ID=cds-WP_000762881.1;Parent=gene-AC57_RS00785;Dbxref=GenBank:WP_000762881.1;Name=WP_000762881.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707426.1;locus_tag=AC57_RS00785;product=antitermination protein;protein_id=WP_000762881.1;transl_table=11 NZ_JJLR01000190.1 RefSeq gene 2949 3329 . - . ID=gene-AC57_RS00780;Name=AC57_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00780;old_locus_tag=AC57_4996 NZ_JJLR01000190.1 Protein Homology CDS 2949 3329 . - 0 ID=cds-WP_032186280.1;Parent=gene-AC57_RS00780;Dbxref=GenBank:WP_032186280.1;Name=WP_032186280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140009.1;locus_tag=AC57_RS00780;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_032186280.1;transl_table=11 NZ_JJLR01000190.1 RefSeq gene 3330 4070 . - . ID=gene-AC57_RS00775;Name=AC57_RS00775;end_range=4070,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00775;old_locus_tag=AC57_4997;partial=true NZ_JJLR01000190.1 Protein Homology CDS 3330 4070 . - 0 ID=cds-WP_032285790.1;Parent=gene-AC57_RS00775;Dbxref=GenBank:WP_032285790.1;Name=WP_032285790.1;end_range=4070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265086.1;locus_tag=AC57_RS00775;partial=true;product=DUF968 domain-containing protein;protein_id=WP_032285790.1;transl_table=11 ##sequence-region NZ_JJLR01000191.1 1 464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000191.1 RefSeq region 1 464 . + . ID=NZ_JJLR01000191.1:1..464;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000191.1 RefSeq gene 1 464 . + . ID=gene-AC57_RS26115;Name=AC57_RS26115;end_range=464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26115;old_locus_tag=AC57_4998;partial=true;start_range=.,1 NZ_JJLR01000191.1 Protein Homology CDS 1 464 . + 1 ID=cds-WP_187439614.1;Parent=gene-AC57_RS26115;Dbxref=GenBank:WP_187439614.1;Name=WP_187439614.1;end_range=464,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310258.1;locus_tag=AC57_RS26115;partial=true;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_187439614.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000192.1 1 10585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000192.1 RefSeq region 1 10585 . + . ID=NZ_JJLR01000192.1:1..10585;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000192.1 RefSeq pseudogene 1 480 . - . ID=gene-AC57_RS00770;Name=AC57_RS00770;end_range=480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00770;old_locus_tag=AC57_4999;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000192.1 Protein Homology CDS 1 480 . - 0 ID=cds-AC57_RS00770;Parent=gene-AC57_RS00770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS00770;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000192.1 cmsearch sequence_feature 299 415 . - . ID=id-AC57_RS00770;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS00770;pseudo=true NZ_JJLR01000192.1 RefSeq gene 866 2059 . - . ID=gene-AC57_RS00765;Name=AC57_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00765;old_locus_tag=AC57_5000 NZ_JJLR01000192.1 Protein Homology CDS 866 2059 . - 0 ID=cds-WP_000074481.1;Parent=gene-AC57_RS00765;Dbxref=GenBank:WP_000074481.1;Name=WP_000074481.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709453.1;locus_tag=AC57_RS00765;product=MFS transporter;protein_id=WP_000074481.1;transl_table=11 NZ_JJLR01000192.1 RefSeq gene 2195 3919 . + . ID=gene-AC57_RS00760;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=AC57_RS00760;old_locus_tag=AC57_5001 NZ_JJLR01000192.1 Protein Homology CDS 2195 3919 . + 0 ID=cds-WP_001299620.1;Parent=gene-AC57_RS00760;Dbxref=GenBank:WP_001299620.1;Name=WP_001299620.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314127.1;locus_tag=AC57_RS00760;product=aerobactin synthase IucA;protein_id=WP_001299620.1;transl_table=11 NZ_JJLR01000192.1 RefSeq gene 3920 4867 . + . ID=gene-AC57_RS00755;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=AC57_RS00755;old_locus_tag=AC57_5002 NZ_JJLR01000192.1 Protein Homology CDS 3920 4867 . + 0 ID=cds-WP_001287497.1;Parent=gene-AC57_RS00755;Dbxref=GenBank:WP_001287497.1;Name=WP_001287497.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=AC57_RS00755;product=N(6)-hydroxylysine O-acetyltransferase IucB;protein_id=WP_001287497.1;transl_table=11 NZ_JJLR01000192.1 RefSeq gene 4867 6609 . + . ID=gene-AC57_RS00750;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=AC57_RS00750;old_locus_tag=AC57_5003 NZ_JJLR01000192.1 Protein Homology CDS 4867 6609 . + 0 ID=cds-WP_032234179.1;Parent=gene-AC57_RS00750;Dbxref=GenBank:WP_032234179.1;Name=WP_032234179.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AC57_RS00750;product=NIS family aerobactin synthetase IucC;protein_id=WP_032234179.1;transl_table=11 NZ_JJLR01000192.1 RefSeq gene 6606 7943 . + . ID=gene-AC57_RS00745;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=protein_coding;locus_tag=AC57_RS00745;old_locus_tag=AC57_5004 NZ_JJLR01000192.1 Protein Homology CDS 6606 7943 . + 0 ID=cds-WP_000750139.1;Parent=gene-AC57_RS00745;Dbxref=GenBank:WP_000750139.1;Name=WP_000750139.1;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709457.1;locus_tag=AC57_RS00745;product=NADPH-dependent L-lysine N(6)-monooxygenase IucD;protein_id=WP_000750139.1;transl_table=11 NZ_JJLR01000192.1 RefSeq gene 7949 10144 . + . ID=gene-AC57_RS00740;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=AC57_RS00740;old_locus_tag=AC57_5005 NZ_JJLR01000192.1 Protein Homology CDS 7949 10144 . + 0 ID=cds-WP_001432292.1;Parent=gene-AC57_RS00740;Dbxref=GenBank:WP_001432292.1;Name=WP_001432292.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709458.2;locus_tag=AC57_RS00740;product=ferric aerobactin receptor IutA;protein_id=WP_001432292.1;transl_table=11 NZ_JJLR01000192.1 RefSeq gene 10402 10585 . - . ID=gene-AC57_RS0125805;Name=AC57_RS0125805;end_range=10585,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125805;old_locus_tag=AC57_5006;partial=true NZ_JJLR01000192.1 Protein Homology CDS 10402 10585 . - 1 ID=cds-WP_016230625.1-2;Parent=gene-AC57_RS0125805;Dbxref=GenBank:WP_016230625.1;Name=WP_016230625.1;Ontology_term=GO:0015074;end_range=10585,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS0125805;partial=true;product=IS3 family transposase;protein_id=WP_016230625.1;transl_table=11 ##sequence-region NZ_JJLR01000193.1 1 2910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000193.1 RefSeq region 1 2910 . + . ID=NZ_JJLR01000193.1:1..2910;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000193.1 RefSeq gene 1 207 . + . ID=gene-AC57_RS00735;Name=AC57_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00735;old_locus_tag=AC57_5007;partial=true;start_range=.,1 NZ_JJLR01000193.1 Protein Homology CDS 1 207 . + 0 ID=cds-WP_032285791.1;Parent=gene-AC57_RS00735;Dbxref=GenBank:WP_032285791.1;Name=WP_032285791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC57_RS00735;partial=true;product=transposase domain-containing protein;protein_id=WP_032285791.1;start_range=.,1;transl_table=11 NZ_JJLR01000193.1 RefSeq pseudogene 246 341 . - . ID=gene-AC57_RS30115;Name=AC57_RS30115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30115;partial=true;pseudo=true;start_range=.,246 NZ_JJLR01000193.1 Protein Homology CDS 246 341 . - 0 ID=cds-AC57_RS30115;Parent=gene-AC57_RS30115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000526115.1;locus_tag=AC57_RS30115;partial=true;product=IS200/IS605 family transposase;pseudo=true;start_range=.,246;transl_table=11 NZ_JJLR01000193.1 RefSeq pseudogene 352 1159 . + . ID=gene-AC57_RS0125810;Name=tnpC;end_range=1159,.;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AC57_RS0125810;partial=true;pseudo=true;start_range=.,352 NZ_JJLR01000193.1 Protein Homology CDS 352 1159 . + 0 ID=cds-AC57_RS0125810;Parent=gene-AC57_RS0125810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=1159,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC57_RS0125810;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,352;transl_table=11 NZ_JJLR01000193.1 RefSeq gene 1565 2398 . + . ID=gene-AC57_RS00730;Name=AC57_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00730;old_locus_tag=AC57_5010 NZ_JJLR01000193.1 Protein Homology CDS 1565 2398 . + 0 ID=cds-WP_001575765.1;Parent=gene-AC57_RS00730;Dbxref=GenBank:WP_001575765.1;Name=WP_001575765.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=AC57_RS00730;product=helix-turn-helix domain-containing protein;protein_id=WP_001575765.1;transl_table=11 NZ_JJLR01000193.1 RefSeq gene 2709 2910 . + . ID=gene-AC57_RS28425;Name=AC57_RS28425;end_range=2910,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28425;old_locus_tag=AC57_5011;partial=true NZ_JJLR01000193.1 Protein Homology CDS 2709 2910 . + 0 ID=cds-WP_000179200.1-3;Parent=gene-AC57_RS28425;Dbxref=GenBank:WP_000179200.1;Name=WP_000179200.1;Ontology_term=GO:0006313;end_range=2910,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS28425;partial=true;product=IS1 family transposase;protein_id=WP_000179200.1;transl_table=11 ##sequence-region NZ_JJLR01000194.1 1 1317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000194.1 RefSeq region 1 1317 . + . ID=NZ_JJLR01000194.1:1..1317;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000194.1 RefSeq gene 1 1317 . + . ID=gene-AC57_RS00725;Name=tnpC;end_range=1317,.;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AC57_RS00725;old_locus_tag=AC57_5012;partial=true;start_range=.,1 NZ_JJLR01000194.1 Protein Homology CDS 1 1317 . + 2 ID=cds-WP_032285792.1;Parent=gene-AC57_RS00725;Dbxref=GenBank:WP_032285792.1;Name=WP_032285792.1;Ontology_term=GO:0004803;end_range=1317,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC57_RS00725;partial=true;product=IS66 family transposase;protein_id=WP_032285792.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000195.1 1 39767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000195.1 RefSeq region 1 39767 . + . ID=NZ_JJLR01000195.1:1..39767;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000195.1 RefSeq gene 1 216 . - . ID=gene-AC57_RS00720;Name=AC57_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00720;old_locus_tag=AC57_5013;partial=true;start_range=.,1 NZ_JJLR01000195.1 Protein Homology CDS 1 216 . - 0 ID=cds-WP_001395569.1-3;Parent=gene-AC57_RS00720;Dbxref=GenBank:WP_001395569.1;Name=WP_001395569.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS00720;partial=true;product=IS1 family transposase;protein_id=WP_001395569.1;start_range=.,1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 355 537 . + . ID=gene-AC57_RS00715;Name=AC57_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00715;old_locus_tag=AC57_5014 NZ_JJLR01000195.1 Protein Homology CDS 355 537 . + 0 ID=cds-WP_001299736.1;Parent=gene-AC57_RS00715;Dbxref=GenBank:WP_001299736.1;Name=WP_001299736.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001433978.1;locus_tag=AC57_RS00715;product=TraY domain-containing protein;protein_id=WP_001299736.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 570 929 . + . ID=gene-AC57_RS00710;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AC57_RS00710;old_locus_tag=AC57_5015 NZ_JJLR01000195.1 Protein Homology CDS 570 929 . + 0 ID=cds-WP_000994781.1;Parent=gene-AC57_RS00710;Dbxref=GenBank:WP_000994781.1;Name=WP_000994781.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825183.1;locus_tag=AC57_RS00710;product=type IV conjugative transfer system pilin TraA;protein_id=WP_000994781.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 944 1255 . + . ID=gene-AC57_RS00705;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AC57_RS00705;old_locus_tag=AC57_5016 NZ_JJLR01000195.1 Protein Homology CDS 944 1255 . + 0 ID=cds-WP_000012106.1;Parent=gene-AC57_RS00705;Dbxref=GenBank:WP_000012106.1;Name=WP_000012106.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AC57_RS00705;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012106.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 1277 1843 . + . ID=gene-AC57_RS00700;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AC57_RS00700;old_locus_tag=AC57_5017 NZ_JJLR01000195.1 Protein Homology CDS 1277 1843 . + 0 ID=cds-WP_000399797.1;Parent=gene-AC57_RS00700;Dbxref=GenBank:WP_000399797.1;Name=WP_000399797.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AC57_RS00700;product=type IV conjugative transfer system protein TraE;protein_id=WP_000399797.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 1830 2558 . + . ID=gene-AC57_RS00695;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AC57_RS00695;old_locus_tag=AC57_5018 NZ_JJLR01000195.1 Protein Homology CDS 1830 2558 . + 0 ID=cds-WP_001230766.1;Parent=gene-AC57_RS00695;Dbxref=GenBank:WP_001230766.1;Name=WP_001230766.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001230803.1;locus_tag=AC57_RS00695;product=type-F conjugative transfer system secretin TraK;protein_id=WP_001230766.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 2558 3985 . + . ID=gene-AC57_RS00690;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AC57_RS00690;old_locus_tag=AC57_5019 NZ_JJLR01000195.1 Protein Homology CDS 2558 3985 . + 0 ID=cds-WP_032279806.1;Parent=gene-AC57_RS00690;Dbxref=GenBank:WP_032279806.1;Name=WP_032279806.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AC57_RS00690;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_032279806.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 3975 4565 . + . ID=gene-AC57_RS00685;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AC57_RS00685;old_locus_tag=AC57_5020 NZ_JJLR01000195.1 Protein Homology CDS 3975 4565 . + 0 ID=cds-WP_001523507.1;Parent=gene-AC57_RS00685;Dbxref=GenBank:WP_001523507.1;Name=WP_001523507.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=AC57_RS00685;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_001523507.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 4552 4749 . + . ID=gene-AC57_RS00680;Name=AC57_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00680;old_locus_tag=AC57_5021 NZ_JJLR01000195.1 Protein Homology CDS 4552 4749 . + 0 ID=cds-WP_001454499.1;Parent=gene-AC57_RS00680;Dbxref=GenBank:WP_001454499.1;Name=WP_001454499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001423674.1;locus_tag=AC57_RS00680;product=conjugal transfer protein TrbD;protein_id=WP_001454499.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 4761 5012 . + . ID=gene-AC57_RS00675;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=AC57_RS00675;old_locus_tag=AC57_5022 NZ_JJLR01000195.1 Protein Homology CDS 4761 5012 . + 0 ID=cds-WP_001038342.1;Parent=gene-AC57_RS00675;Dbxref=GenBank:WP_001038342.1;Name=WP_001038342.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AC57_RS00675;product=conjugal transfer protein TrbG;protein_id=WP_001038342.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 5009 5524 . + . ID=gene-AC57_RS00670;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AC57_RS00670;old_locus_tag=AC57_5023 NZ_JJLR01000195.1 Protein Homology CDS 5009 5524 . + 0 ID=cds-WP_025269857.1;Parent=gene-AC57_RS00670;Dbxref=GenBank:WP_025269857.1;Name=WP_025269857.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AC57_RS00670;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_025269857.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 5659 5880 . + . ID=gene-AC57_RS28430;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AC57_RS28430;old_locus_tag=AC57_5024 NZ_JJLR01000195.1 Protein Homology CDS 5659 5880 . + 0 ID=cds-WP_001278689.1;Parent=gene-AC57_RS28430;Dbxref=GenBank:WP_001278689.1;Name=WP_001278689.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AC57_RS28430;product=conjugal transfer protein TraR;protein_id=WP_001278689.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 6040 8667 . + . ID=gene-AC57_RS00660;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AC57_RS00660;old_locus_tag=AC57_5025 NZ_JJLR01000195.1 Protein Homology CDS 6040 8667 . + 0 ID=cds-WP_032279809.1;Parent=gene-AC57_RS00660;Dbxref=GenBank:WP_032279809.1;Name=WP_032279809.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AC57_RS00660;product=type IV secretion system protein TraC;protein_id=WP_032279809.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 8664 9050 . + . ID=gene-AC57_RS00655;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AC57_RS00655;old_locus_tag=AC57_5026 NZ_JJLR01000195.1 Protein Homology CDS 8664 9050 . + 0 ID=cds-WP_000099689.1;Parent=gene-AC57_RS00655;Dbxref=GenBank:WP_000099689.1;Name=WP_000099689.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AC57_RS00655;product=type-F conjugative transfer system protein TrbI;protein_id=WP_000099689.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 9047 9679 . + . ID=gene-AC57_RS00650;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AC57_RS00650;old_locus_tag=AC57_5027 NZ_JJLR01000195.1 Protein Homology CDS 9047 9679 . + 0 ID=cds-WP_032279810.1;Parent=gene-AC57_RS00650;Dbxref=GenBank:WP_032279810.1;Name=WP_032279810.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=AC57_RS00650;product=type-F conjugative transfer system protein TraW;protein_id=WP_032279810.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 9676 10668 . + . ID=gene-AC57_RS00645;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AC57_RS00645;old_locus_tag=AC57_5028 NZ_JJLR01000195.1 Protein Homology CDS 9676 10668 . + 0 ID=cds-WP_000830839.1;Parent=gene-AC57_RS00645;Dbxref=GenBank:WP_000830839.1;Name=WP_000830839.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AC57_RS00645;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830839.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 10677 11315 . + . ID=gene-AC57_RS00640;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AC57_RS00640;old_locus_tag=AC57_5029 NZ_JJLR01000195.1 Protein Homology CDS 10677 11315 . + 0 ID=cds-WP_000777692.1;Parent=gene-AC57_RS00640;Dbxref=GenBank:WP_000777692.1;Name=WP_000777692.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553832.1;locus_tag=AC57_RS00640;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_000777692.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 11312 13120 . + . ID=gene-AC57_RS00635;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AC57_RS00635;old_locus_tag=AC57_5030 NZ_JJLR01000195.1 Protein Homology CDS 11312 13120 . + 0 ID=cds-WP_032200982.1;Parent=gene-AC57_RS00635;Dbxref=GenBank:WP_032200982.1;Name=WP_032200982.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=AC57_RS00635;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_032200982.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 13147 13404 . + . ID=gene-AC57_RS00630;Name=AC57_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00630;old_locus_tag=AC57_5031 NZ_JJLR01000195.1 Protein Homology CDS 13147 13404 . + 0 ID=cds-WP_000864325.1;Parent=gene-AC57_RS00630;Dbxref=GenBank:WP_000864325.1;Name=WP_000864325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=AC57_RS00630;product=conjugal transfer protein TrbE;protein_id=WP_000864325.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 13397 14140 . + . ID=gene-AC57_RS00625;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AC57_RS00625;old_locus_tag=AC57_5032 NZ_JJLR01000195.1 Protein Homology CDS 13397 14140 . + 0 ID=cds-WP_001030376.1;Parent=gene-AC57_RS00625;Dbxref=GenBank:WP_001030376.1;Name=WP_001030376.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AC57_RS00625;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001030376.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 14156 14503 . + . ID=gene-AC57_RS00620;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AC57_RS00620;old_locus_tag=AC57_5033 NZ_JJLR01000195.1 Protein Homology CDS 14156 14503 . + 0 ID=cds-WP_001287902.1;Parent=gene-AC57_RS00620;Dbxref=GenBank:WP_001287902.1;Name=WP_001287902.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287890.1;locus_tag=AC57_RS00620;product=conjugal transfer protein TrbA;protein_id=WP_001287902.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 14622 14906 . + . ID=gene-AC57_RS00615;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AC57_RS00615;old_locus_tag=AC57_5034 NZ_JJLR01000195.1 Protein Homology CDS 14622 14906 . + 0 ID=cds-WP_000624110.1;Parent=gene-AC57_RS00615;Dbxref=GenBank:WP_000624110.1;Name=WP_000624110.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=AC57_RS00615;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_000624110.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 14893 15438 . + . ID=gene-AC57_RS00610;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AC57_RS00610;old_locus_tag=AC57_5035 NZ_JJLR01000195.1 Protein Homology CDS 14893 15438 . + 0 ID=cds-WP_032279812.1;Parent=gene-AC57_RS00610;Dbxref=GenBank:WP_032279812.1;Name=WP_032279812.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AC57_RS00610;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_032279812.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 15368 15730 . + . ID=gene-AC57_RS00605;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AC57_RS00605;old_locus_tag=AC57_5036 NZ_JJLR01000195.1 Protein Homology CDS 15368 15730 . + 0 ID=cds-WP_001443292.1;Parent=gene-AC57_RS00605;Dbxref=GenBank:WP_001443292.1;Name=WP_001443292.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009424419.1;locus_tag=AC57_RS00605;product=P-type conjugative transfer protein TrbJ;protein_id=WP_001443292.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 15730 17103 . + . ID=gene-AC57_RS00600;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AC57_RS00600;old_locus_tag=AC57_5037 NZ_JJLR01000195.1 Protein Homology CDS 15730 17103 . + 0 ID=cds-WP_001137358.1;Parent=gene-AC57_RS00600;Dbxref=GenBank:WP_001137358.1;Name=WP_001137358.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137359.1;locus_tag=AC57_RS00600;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_001137358.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 17100 19922 . + . ID=gene-AC57_RS00595;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AC57_RS00595;old_locus_tag=AC57_5038 NZ_JJLR01000195.1 Protein Homology CDS 17100 19922 . + 0 ID=cds-WP_032200986.1;Parent=gene-AC57_RS00595;Dbxref=GenBank:WP_032200986.1;Name=WP_032200986.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774307.1;locus_tag=AC57_RS00595;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_032200986.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 19937 20440 . + . ID=gene-AC57_RS0125815;Name=AC57_RS0125815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125815 NZ_JJLR01000195.1 Protein Homology CDS 19937 20440 . + 0 ID=cds-WP_061583830.1;Parent=gene-AC57_RS0125815;Dbxref=GenBank:WP_061583830.1;Name=WP_061583830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605506.1;locus_tag=AC57_RS0125815;product=surface exclusion protein;protein_id=WP_061583830.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 20472 21203 . + . ID=gene-AC57_RS00590;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AC57_RS00590;old_locus_tag=AC57_5040 NZ_JJLR01000195.1 Protein Homology CDS 20472 21203 . + 0 ID=cds-WP_032279820.1;Parent=gene-AC57_RS00590;Dbxref=GenBank:WP_032279820.1;Name=WP_032279820.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=AC57_RS00590;product=conjugal transfer complement resistance protein TraT;protein_id=WP_032279820.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 21456 23609 . + . ID=gene-AC57_RS00585;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AC57_RS00585;old_locus_tag=AC57_5041 NZ_JJLR01000195.1 Protein Homology CDS 21456 23609 . + 0 ID=cds-WP_032279813.1;Parent=gene-AC57_RS00585;Dbxref=GenBank:WP_032279813.1;Name=WP_032279813.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589353.1;locus_tag=AC57_RS00585;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_032279813.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 23609 28879 . + . ID=gene-AC57_RS00580;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AC57_RS00580;old_locus_tag=AC57_5042 NZ_JJLR01000195.1 Protein Homology CDS 23609 28879 . + 0 ID=cds-WP_032279815.1;Parent=gene-AC57_RS00580;Dbxref=GenBank:WP_032279815.1;Name=WP_032279815.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=AC57_RS00580;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_032279815.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 28899 29645 . + . ID=gene-AC57_RS00575;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AC57_RS00575;old_locus_tag=AC57_5043 NZ_JJLR01000195.1 Protein Homology CDS 28899 29645 . + 0 ID=cds-WP_000205718.1;Parent=gene-AC57_RS00575;Dbxref=GenBank:WP_000205718.1;Name=WP_000205718.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858383.2;locus_tag=AC57_RS00575;product=conjugal transfer pilus acetylase TraX;protein_id=WP_000205718.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 29700 30260 . + . ID=gene-AC57_RS00570;Name=AC57_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00570;old_locus_tag=AC57_5044 NZ_JJLR01000195.1 Protein Homology CDS 29700 30260 . + 0 ID=cds-WP_032279816.1;Parent=gene-AC57_RS00570;Dbxref=GenBank:WP_032279816.1;Name=WP_032279816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AC57_RS00570;product=fertility inhibition protein FinO;protein_id=WP_032279816.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 30395 30607 . + . ID=gene-AC57_RS00565;Name=AC57_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00565;old_locus_tag=AC57_5045 NZ_JJLR01000195.1 Protein Homology CDS 30395 30607 . + 0 ID=cds-WP_001541896.1;Parent=gene-AC57_RS00565;Dbxref=GenBank:WP_001541896.1;Name=WP_001541896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958725.1;locus_tag=AC57_RS00565;product=ANR family transcriptional regulator;protein_id=WP_001541896.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 31054 31203 . + . ID=gene-AC57_RS0125820;Name=AC57_RS0125820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125820 NZ_JJLR01000195.1 Protein Homology CDS 31054 31203 . + 0 ID=cds-WP_001312851.1;Parent=gene-AC57_RS0125820;Dbxref=GenBank:WP_001312851.1;Name=WP_001312851.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=AC57_RS0125820;product=Hok/Gef family protein;protein_id=WP_001312851.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 31487 31744 . + . ID=gene-AC57_RS00560;Name=AC57_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00560;old_locus_tag=AC57_5046 NZ_JJLR01000195.1 Protein Homology CDS 31487 31744 . + 0 ID=cds-WP_001541895.1;Parent=gene-AC57_RS00560;Dbxref=GenBank:WP_001541895.1;Name=WP_001541895.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297746.1;locus_tag=AC57_RS00560;product=replication regulatory protein RepA;protein_id=WP_001541895.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 31761 32012 . - . ID=gene-AC57_RS31145;Name=AC57_RS31145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS31145 NZ_JJLR01000195.1 Protein Homology CDS 31761 32012 . - 0 ID=cds-WP_307726128.1;Parent=gene-AC57_RS31145;Dbxref=GenBank:WP_307726128.1;Name=WP_307726128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012006549.1;locus_tag=AC57_RS31145;product=replication protein RepA;protein_id=WP_307726128.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 31997 32050 . + . ID=gene-AC57_RS26270;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AC57_RS26270 NZ_JJLR01000195.1 Protein Homology CDS 31997 32050 . + 0 ID=cds-WP_306293295.1;Parent=gene-AC57_RS26270;Dbxref=GenBank:WP_306293295.1;Name=WP_306293295.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AC57_RS26270;product=RepA leader peptide Tap;protein_id=WP_306293295.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 32043 32900 . + . ID=gene-AC57_RS00555;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AC57_RS00555;old_locus_tag=AC57_5047 NZ_JJLR01000195.1 Protein Homology CDS 32043 32900 . + 0 ID=cds-WP_032279818.1;Parent=gene-AC57_RS00555;Dbxref=GenBank:WP_032279818.1;Name=WP_032279818.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AC57_RS00555;product=incFII family plasmid replication initiator RepA;protein_id=WP_032279818.1;transl_table=11 NZ_JJLR01000195.1 RefSeq pseudogene 33816 33953 . + . ID=gene-AC57_RS30920;Name=AC57_RS30920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30920;partial=true;pseudo=true;start_range=.,33816 NZ_JJLR01000195.1 Protein Homology CDS 33816 33953 . + 0 ID=cds-AC57_RS30920;Parent=gene-AC57_RS30920;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077272.1;locus_tag=AC57_RS30920;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,33816;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 33973 34236 . + . ID=gene-AC57_RS00550;Name=AC57_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00550;old_locus_tag=AC57_5049 NZ_JJLR01000195.1 Protein Homology CDS 33973 34236 . + 0 ID=cds-WP_001089474.1;Parent=gene-AC57_RS00550;Dbxref=GenBank:WP_001089474.1;Name=WP_001089474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089474.1;locus_tag=AC57_RS00550;product=hypothetical protein;protein_id=WP_001089474.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 34226 34525 . + . ID=gene-AC57_RS00545;Name=AC57_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00545;old_locus_tag=AC57_5050 NZ_JJLR01000195.1 Protein Homology CDS 34226 34525 . + 0 ID=cds-WP_000119542.1;Parent=gene-AC57_RS00545;Dbxref=GenBank:WP_000119542.1;Name=WP_000119542.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528606.1;locus_tag=AC57_RS00545;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000119542.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 34883 35158 . + . ID=gene-AC57_RS0125830;Name=AC57_RS0125830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125830 NZ_JJLR01000195.1 Protein Homology CDS 34883 35158 . + 0 ID=cds-WP_000877662.1;Parent=gene-AC57_RS0125830;Dbxref=GenBank:WP_000877662.1;Name=WP_000877662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000877662.1;locus_tag=AC57_RS0125830;product=bacteriocin immunity protein;protein_id=WP_000877662.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 35236 36423 . - . ID=gene-AC57_RS00540;Name=AC57_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00540;old_locus_tag=AC57_5053 NZ_JJLR01000195.1 Protein Homology CDS 35236 36423 . - 0 ID=cds-WP_025999368.1;Parent=gene-AC57_RS00540;Dbxref=GenBank:WP_025999368.1;Name=WP_025999368.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227443.1;locus_tag=AC57_RS00540;product=MDR family MFS transporter;protein_id=WP_025999368.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 36480 37241 . - . ID=gene-AC57_RS00535;Name=AC57_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00535;old_locus_tag=AC57_5054 NZ_JJLR01000195.1 Protein Homology CDS 36480 37241 . - 0 ID=cds-WP_000020504.1;Parent=gene-AC57_RS00535;Dbxref=GenBank:WP_000020504.1;Name=WP_000020504.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020503.1;locus_tag=AC57_RS00535;product=ABC transporter ATP-binding protein;protein_id=WP_000020504.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 37241 38278 . - . ID=gene-AC57_RS00530;Name=AC57_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00530;old_locus_tag=AC57_5055 NZ_JJLR01000195.1 Protein Homology CDS 37241 38278 . - 0 ID=cds-WP_032241771.1;Parent=gene-AC57_RS00530;Dbxref=GenBank:WP_032241771.1;Name=WP_032241771.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227440.1;locus_tag=AC57_RS00530;product=FecCD family ABC transporter permease;protein_id=WP_032241771.1;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 38278 39276 . - . ID=gene-AC57_RS00525;Name=AC57_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00525;old_locus_tag=AC57_5056 NZ_JJLR01000195.1 Protein Homology CDS 38278 39276 . - 0 ID=cds-WP_004175650.1;Parent=gene-AC57_RS00525;Dbxref=GenBank:WP_004175650.1;Name=WP_004175650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227439.1;locus_tag=AC57_RS00525;product=ABC transporter substrate-binding protein;protein_id=WP_004175650.1;transl_table=11 NZ_JJLR01000195.1 RefSeq pseudogene 39426 39542 . - . ID=gene-AC57_RS30120;Name=AC57_RS30120;end_range=39542,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30120;old_locus_tag=AC57_5057;partial=true;pseudo=true NZ_JJLR01000195.1 Protein Homology CDS 39426 39542 . - 0 ID=cds-AC57_RS30120;Parent=gene-AC57_RS30120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=39542,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611134.1;locus_tag=AC57_RS30120;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000195.1 RefSeq gene 39620 39767 . + . ID=gene-AC57_RS0125835;Name=AC57_RS0125835;end_range=39767,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125835;partial=true NZ_JJLR01000195.1 Protein Homology CDS 39620 39767 . + 0 ID=cds-WP_032285793.1;Parent=gene-AC57_RS0125835;Dbxref=GenBank:WP_032285793.1;Name=WP_032285793.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=39767,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=AC57_RS0125835;partial=true;product=transposase;protein_id=WP_032285793.1;transl_table=11 ##sequence-region NZ_JJLR01000196.1 1 465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000196.1 RefSeq region 1 465 . + . ID=NZ_JJLR01000196.1:1..465;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000196.1 RefSeq pseudogene 1 328 . - . ID=gene-AC57_RS00520;Name=AC57_RS00520;end_range=328,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00520;old_locus_tag=AC57_5058;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000196.1 Protein Homology CDS 1 328 . - 0 ID=cds-AC57_RS00520;Parent=gene-AC57_RS00520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=328,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201219.1;locus_tag=AC57_RS00520;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000196.1 RefSeq pseudogene 324 465 . - . ID=gene-AC57_RS29495;Name=AC57_RS29495;end_range=465,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29495;partial=true;pseudo=true NZ_JJLR01000196.1 Protein Homology CDS 324 465 . - 1 ID=cds-AC57_RS29495;Parent=gene-AC57_RS29495;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=465,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488852.1;locus_tag=AC57_RS29495;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000197.1 1 2350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000197.1 RefSeq region 1 2350 . + . ID=NZ_JJLR01000197.1:1..2350;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000197.1 RefSeq gene 329 1942 . - . ID=gene-AC57_RS00515;Name=AC57_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00515;old_locus_tag=AC57_5060 NZ_JJLR01000197.1 Protein Homology CDS 329 1942 . - 0 ID=cds-WP_000080172.1-4;Parent=gene-AC57_RS00515;Dbxref=GenBank:WP_000080172.1;Name=WP_000080172.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS00515;product=IS66-like element ISEc43 family transposase;protein_id=WP_000080172.1;transl_table=11 NZ_JJLR01000197.1 RefSeq gene 1973 2323 . - . ID=gene-AC57_RS00510;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00510;old_locus_tag=AC57_5061 NZ_JJLR01000197.1 Protein Homology CDS 1973 2323 . - 0 ID=cds-WP_000624688.1-4;Parent=gene-AC57_RS00510;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS00510;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 ##sequence-region NZ_JJLR01000198.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000198.1 RefSeq region 1 370 . + . ID=NZ_JJLR01000198.1:1..370;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000198.1 RefSeq gene 103 176 . + . ID=gene-AC57_RS00505;Name=AC57_RS00505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00505;old_locus_tag=AC57_5062 NZ_JJLR01000198.1 tRNAscan-SE tRNA 103 176 . + . ID=rna-AC57_RS00505;Parent=gene-AC57_RS00505;anticodon=(pos:135..137);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00505;product=tRNA-Cys NZ_JJLR01000198.1 tRNAscan-SE exon 103 176 . + . ID=exon-AC57_RS00505-1;Parent=rna-AC57_RS00505;anticodon=(pos:135..137);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00505;product=tRNA-Cys NZ_JJLR01000198.1 RefSeq gene 189 275 . + . ID=gene-AC57_RS00500;Name=AC57_RS00500;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00500;old_locus_tag=AC57_5063 NZ_JJLR01000198.1 tRNAscan-SE tRNA 189 275 . + . ID=rna-AC57_RS00500;Parent=gene-AC57_RS00500;anticodon=(pos:223..225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00500;product=tRNA-Leu NZ_JJLR01000198.1 tRNAscan-SE exon 189 275 . + . ID=exon-AC57_RS00500-1;Parent=rna-AC57_RS00500;anticodon=(pos:223..225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00500;product=tRNA-Leu ##sequence-region NZ_JJLR01000199.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000199.1 RefSeq region 1 2047 . + . ID=NZ_JJLR01000199.1:1..2047;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000199.1 RefSeq gene 1 146 . - . ID=gene-AC57_RS28465;Name=AC57_RS28465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28465;old_locus_tag=AC57_5064;partial=true;start_range=.,1 NZ_JJLR01000199.1 Protein Homology CDS 1 146 . - 0 ID=cds-WP_074512535.1;Parent=gene-AC57_RS28465;Dbxref=GenBank:WP_074512535.1;Name=WP_074512535.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020236337.1;locus_tag=AC57_RS28465;partial=true;product=LysR family transcriptional regulator;protein_id=WP_074512535.1;start_range=.,1;transl_table=11 NZ_JJLR01000199.1 RefSeq gene 259 1470 . + . ID=gene-AC57_RS00495;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AC57_RS00495;old_locus_tag=AC57_5065 NZ_JJLR01000199.1 Protein Homology CDS 259 1470 . + 0 ID=cds-WP_001182363.1-2;Parent=gene-AC57_RS00495;Dbxref=GenBank:WP_001182363.1;Name=WP_001182363.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AC57_RS00495;product=purine nucleoside transporter PunC;protein_id=WP_001182363.1;transl_table=11 NZ_JJLR01000199.1 RefSeq pseudogene 1761 2047 . + . ID=gene-AC57_RS00490;Name=AC57_RS00490;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00490;old_locus_tag=AC57_5066;partial=true;pseudo=true NZ_JJLR01000199.1 Protein Homology CDS 1761 2047 . + 0 ID=cds-AC57_RS00490;Parent=gene-AC57_RS00490;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310397.1;locus_tag=AC57_RS00490;partial=true;product=cyclopropane-fatty-acyl-phospholipid synthase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000200.1 1 473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000200.1 RefSeq region 1 473 . + . ID=NZ_JJLR01000200.1:1..473;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000200.1 RefSeq pseudogene 147 473 . - . ID=gene-AC57_RS0125840;Name=AC57_RS0125840;end_range=473,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125840;partial=true;pseudo=true;start_range=.,147 NZ_JJLR01000200.1 Protein Homology CDS 147 473 . - 0 ID=cds-AC57_RS0125840;Parent=gene-AC57_RS0125840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=473,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558160.1;locus_tag=AC57_RS0125840;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,147;transl_table=11 ##sequence-region NZ_JJLR01000201.1 1 4923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000201.1 RefSeq region 1 4923 . + . ID=NZ_JJLR01000201.1:1..4923;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000201.1 RefSeq gene 28 378 . + . ID=gene-AC57_RS00485;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00485;old_locus_tag=AC57_5069 NZ_JJLR01000201.1 Protein Homology CDS 28 378 . + 0 ID=cds-WP_000624688.1-5;Parent=gene-AC57_RS00485;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS00485;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 NZ_JJLR01000201.1 RefSeq pseudogene 409 1833 . + . ID=gene-AC57_RS00480;Name=AC57_RS00480;end_range=1833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00480;old_locus_tag=AC57_5070;partial=true;pseudo=true NZ_JJLR01000201.1 Protein Homology CDS 409 1833 . + 0 ID=cds-AC57_RS00480;Parent=gene-AC57_RS00480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1833,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS00480;partial=true;product=IS66-like element ISEc43 family transposase;pseudo=true;transl_table=11 NZ_JJLR01000201.1 RefSeq gene 2087 2644 . - . ID=gene-AC57_RS00475;Name=AC57_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00475;old_locus_tag=AC57_5071 NZ_JJLR01000201.1 Protein Homology CDS 2087 2644 . - 0 ID=cds-WP_282631789.1;Parent=gene-AC57_RS00475;Dbxref=GenBank:WP_282631789.1;Name=WP_282631789.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000555383.1;locus_tag=AC57_RS00475;product=IS110 family transposase;protein_id=WP_282631789.1;transl_table=11 NZ_JJLR01000201.1 RefSeq gene 2699 3133 . + . ID=gene-AC57_RS00470;Name=AC57_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00470;old_locus_tag=AC57_5072 NZ_JJLR01000201.1 Protein Homology CDS 2699 3133 . + 0 ID=cds-WP_001309734.1-3;Parent=gene-AC57_RS00470;Dbxref=GenBank:WP_001309734.1;Name=WP_001309734.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS00470;product=transposase;protein_id=WP_001309734.1;transl_table=11 NZ_JJLR01000201.1 RefSeq gene 3130 3480 . + . ID=gene-AC57_RS00465;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00465;old_locus_tag=AC57_5073 NZ_JJLR01000201.1 Protein Homology CDS 3130 3480 . + 0 ID=cds-WP_000624688.1-6;Parent=gene-AC57_RS00465;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS00465;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 NZ_JJLR01000201.1 RefSeq gene 3511 4923 . + . ID=gene-AC57_RS00460;Name=AC57_RS00460;end_range=4923,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00460;old_locus_tag=AC57_5074;partial=true NZ_JJLR01000201.1 Protein Homology CDS 3511 4923 . + 0 ID=cds-WP_032285685.1-2;Parent=gene-AC57_RS00460;Dbxref=GenBank:WP_032285685.1;Name=WP_032285685.1;Ontology_term=GO:0006313,GO:0004803;end_range=4923,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS00460;partial=true;product=IS66-like element ISEc43 family transposase;protein_id=WP_032285685.1;transl_table=11 ##sequence-region NZ_JJLR01000202.1 1 2885 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000202.1 RefSeq region 1 2885 . + . ID=NZ_JJLR01000202.1:1..2885;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000202.1 RefSeq gene 1 332 . - . ID=gene-AC57_RS00455;Name=AC57_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00455;old_locus_tag=AC57_5075;partial=true;start_range=.,1 NZ_JJLR01000202.1 Protein Homology CDS 1 332 . - 0 ID=cds-WP_032285795.1;Parent=gene-AC57_RS00455;Dbxref=GenBank:WP_032285795.1;Name=WP_032285795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AC57_RS00455;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_032285795.1;start_range=.,1;transl_table=11 NZ_JJLR01000202.1 RefSeq gene 380 1735 . - . ID=gene-AC57_RS00450;Name=AC57_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00450;old_locus_tag=AC57_5076 NZ_JJLR01000202.1 Protein Homology CDS 380 1735 . - 0 ID=cds-WP_032279670.1;Parent=gene-AC57_RS00450;Dbxref=GenBank:WP_032279670.1;Name=WP_032279670.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AC57_RS00450;product=PTS galactitol transporter subunit IIC;protein_id=WP_032279670.1;transl_table=11 NZ_JJLR01000202.1 RefSeq gene 1739 2023 . - . ID=gene-AC57_RS00445;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AC57_RS00445;old_locus_tag=AC57_5077 NZ_JJLR01000202.1 Protein Homology CDS 1739 2023 . - 0 ID=cds-WP_000823266.1;Parent=gene-AC57_RS00445;Dbxref=GenBank:WP_000823266.1;Name=WP_000823266.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416596.1;locus_tag=AC57_RS00445;product=PTS galactitol transporter subunit IIB;protein_id=WP_000823266.1;transl_table=11 NZ_JJLR01000202.1 RefSeq gene 2054 2506 . - . ID=gene-AC57_RS00440;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AC57_RS00440;old_locus_tag=AC57_5078 NZ_JJLR01000202.1 Protein Homology CDS 2054 2506 . - 0 ID=cds-WP_000182921.1;Parent=gene-AC57_RS00440;Dbxref=GenBank:WP_000182921.1;Name=WP_000182921.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310924.1;locus_tag=AC57_RS00440;product=PTS galactitol transporter subunit IIA;protein_id=WP_000182921.1;transl_table=11 NZ_JJLR01000202.1 RefSeq pseudogene 2516 2587 . - . ID=gene-AC57_RS30925;Name=AC57_RS30925;end_range=2587,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30925;partial=true;pseudo=true NZ_JJLR01000202.1 Protein Homology CDS 2516 2587 . - 0 ID=cds-AC57_RS30925;Parent=gene-AC57_RS30925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2587,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310925.1;locus_tag=AC57_RS30925;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000202.1 RefSeq gene 2645 2885 . + . ID=gene-AC57_RS00435;Name=AC57_RS00435;end_range=2885,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00435;old_locus_tag=AC57_5079;partial=true NZ_JJLR01000202.1 Protein Homology CDS 2645 2885 . + 0 ID=cds-WP_000179208.1-5;Parent=gene-AC57_RS00435;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;end_range=2885,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS00435;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;transl_table=11 ##sequence-region NZ_JJLR01000203.1 1 3116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000203.1 RefSeq region 1 3116 . + . ID=NZ_JJLR01000203.1:1..3116;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000203.1 RefSeq gene 1 355 . + . ID=gene-AC57_RS00430;Name=AC57_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00430;old_locus_tag=AC57_5080;partial=true;start_range=.,1 NZ_JJLR01000203.1 Protein Homology CDS 1 355 . + 1 ID=cds-WP_148725164.1;Parent=gene-AC57_RS00430;Dbxref=GenBank:WP_148725164.1;Name=WP_148725164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC57_RS00430;partial=true;product=IS66 family transposase;protein_id=WP_148725164.1;start_range=.,1;transl_table=11 NZ_JJLR01000203.1 RefSeq gene 501 1148 . + . ID=gene-AC57_RS00425;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS00425;old_locus_tag=AC57_5081 NZ_JJLR01000203.1 Protein Homology CDS 501 1148 . + 0 ID=cds-WP_032280122.1-3;Parent=gene-AC57_RS00425;Dbxref=GenBank:WP_032280122.1;Name=WP_032280122.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355812.1;locus_tag=AC57_RS00425;product=IS66-like element accessory protein TnpA;protein_id=WP_032280122.1;transl_table=11 NZ_JJLR01000203.1 RefSeq gene 1148 1495 . + . ID=gene-AC57_RS00420;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00420;old_locus_tag=AC57_5082 NZ_JJLR01000203.1 Protein Homology CDS 1148 1495 . + 0 ID=cds-WP_000624622.1-4;Parent=gene-AC57_RS00420;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC57_RS00420;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLR01000203.1 RefSeq gene 1515 3086 . + . ID=gene-AC57_RS00415;Name=AC57_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00415;old_locus_tag=AC57_5083 NZ_JJLR01000203.1 Protein Homology CDS 1515 3086 . + 0 ID=cds-WP_032280090.1-3;Parent=gene-AC57_RS00415;Dbxref=GenBank:WP_032280090.1;Name=WP_032280090.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC57_RS00415;product=IS66-like element ISCro1 family transposase;protein_id=WP_032280090.1;transl_table=11 ##sequence-region NZ_JJLR01000204.1 1 2978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000204.1 RefSeq region 1 2978 . + . ID=NZ_JJLR01000204.1:1..2978;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000204.1 RefSeq gene 1 206 . - . ID=gene-AC57_RS00410;Name=AC57_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00410;old_locus_tag=AC57_5084;partial=true;start_range=.,1 NZ_JJLR01000204.1 Protein Homology CDS 1 206 . - 0 ID=cds-WP_000179203.1-3;Parent=gene-AC57_RS00410;Dbxref=GenBank:WP_000179203.1;Name=WP_000179203.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS00410;partial=true;product=IS1 family transposase;protein_id=WP_000179203.1;start_range=.,1;transl_table=11 NZ_JJLR01000204.1 RefSeq gene 372 959 . - . ID=gene-AC57_RS00405;Name=AC57_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00405;old_locus_tag=AC57_5085 NZ_JJLR01000204.1 Protein Homology CDS 372 959 . - 0 ID=cds-WP_032280144.1;Parent=gene-AC57_RS00405;Dbxref=GenBank:WP_032280144.1;Name=WP_032280144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000905839.1;locus_tag=AC57_RS00405;product=serine acetyltransferase;protein_id=WP_032280144.1;transl_table=11 NZ_JJLR01000204.1 RefSeq gene 1357 2970 . - . ID=gene-AC57_RS00400;Name=AC57_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00400;old_locus_tag=AC57_5086 NZ_JJLR01000204.1 Protein Homology CDS 1357 2970 . - 0 ID=cds-WP_032285709.1-3;Parent=gene-AC57_RS00400;Dbxref=GenBank:WP_032285709.1;Name=WP_032285709.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=AC57_RS00400;product=IS66-like element ISEc23 family transposase;protein_id=WP_032285709.1;transl_table=11 ##sequence-region NZ_JJLR01000205.1 1 16559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000205.1 RefSeq region 1 16559 . + . ID=NZ_JJLR01000205.1:1..16559;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000205.1 RefSeq gene 1 1139 . - . ID=gene-AC57_RS00395;Name=AC57_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00395;old_locus_tag=AC57_5087;partial=true;start_range=.,1 NZ_JJLR01000205.1 Protein Homology CDS 1 1139 . - 0 ID=cds-WP_050440070.1-2;Parent=gene-AC57_RS00395;Dbxref=GenBank:WP_050440070.1;Name=WP_050440070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575699.1;locus_tag=AC57_RS00395;partial=true;product=type II secretion system protein GspD;protein_id=WP_050440070.1;start_range=.,1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 1587 2798 . - . ID=gene-AC57_RS00390;Name=AC57_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00390;old_locus_tag=AC57_5089 NZ_JJLR01000205.1 Protein Homology CDS 1587 2798 . - 0 ID=cds-WP_032268386.1-2;Parent=gene-AC57_RS00390;Dbxref=GenBank:WP_032268386.1;Name=WP_032268386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575701.1;locus_tag=AC57_RS00390;product=zonular occludens toxin domain-containing protein;protein_id=WP_032268386.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 2801 3157 . - . ID=gene-AC57_RS0125845;Name=AC57_RS0125845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125845;old_locus_tag=AC57_5090 NZ_JJLR01000205.1 GeneMarkS-2+ CDS 2801 3157 . - 0 ID=cds-WP_000494577.1-2;Parent=gene-AC57_RS0125845;Dbxref=GenBank:WP_000494577.1;Name=WP_000494577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0125845;product=hypothetical protein;protein_id=WP_000494577.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 3160 4467 . - . ID=gene-AC57_RS26120;Name=AC57_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26120;old_locus_tag=AC57_5091 NZ_JJLR01000205.1 GeneMarkS-2+ CDS 3160 4467 . - 0 ID=cds-WP_148725149.1-2;Parent=gene-AC57_RS26120;Dbxref=GenBank:WP_148725149.1;Name=WP_148725149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS26120;product=hypothetical protein;protein_id=WP_148725149.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 4528 4770 . - . ID=gene-AC57_RS00385;Name=AC57_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00385;old_locus_tag=AC57_5092 NZ_JJLR01000205.1 Protein Homology CDS 4528 4770 . - 0 ID=cds-WP_032179868.1-2;Parent=gene-AC57_RS00385;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AC57_RS00385;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 4795 4965 . - . ID=gene-AC57_RS30380;Name=AC57_RS30380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30380;old_locus_tag=AC57_5093 NZ_JJLR01000205.1 Protein Homology CDS 4795 4965 . - 0 ID=cds-WP_000134226.1-2;Parent=gene-AC57_RS30380;Dbxref=GenBank:WP_000134226.1;Name=WP_000134226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AC57_RS30380;product=hypothetical protein;protein_id=WP_000134226.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 4958 5098 . - . ID=gene-AC57_RS30385;Name=AC57_RS30385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30385;old_locus_tag=AC57_5094 NZ_JJLR01000205.1 Protein Homology CDS 4958 5098 . - 0 ID=cds-WP_001422058.1-2;Parent=gene-AC57_RS30385;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AC57_RS30385;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 5103 5528 . - . ID=gene-AC57_RS00380;Name=AC57_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00380;old_locus_tag=AC57_5095 NZ_JJLR01000205.1 Protein Homology CDS 5103 5528 . - 0 ID=cds-WP_032179869.1-2;Parent=gene-AC57_RS00380;Dbxref=GenBank:WP_032179869.1;Name=WP_032179869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AC57_RS00380;product=hypothetical protein;protein_id=WP_032179869.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 5559 7559 . - . ID=gene-AC57_RS00375;Name=AC57_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00375;old_locus_tag=AC57_5096 NZ_JJLR01000205.1 Protein Homology CDS 5559 7559 . - 0 ID=cds-WP_032279731.1-2;Parent=gene-AC57_RS00375;Dbxref=GenBank:WP_032279731.1;Name=WP_032279731.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575774.1;locus_tag=AC57_RS00375;product=replication endonuclease;protein_id=WP_032279731.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 8296 9504 . - . ID=gene-AC57_RS00370;Name=AC57_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00370;old_locus_tag=AC57_5097 NZ_JJLR01000205.1 Protein Homology CDS 8296 9504 . - 0 ID=cds-WP_077756481.1;Parent=gene-AC57_RS00370;Dbxref=GenBank:WP_077756481.1;Name=WP_077756481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575699.1;locus_tag=AC57_RS00370;product=type II secretion system protein GspD;protein_id=WP_077756481.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 9952 11163 . - . ID=gene-AC57_RS00365;Name=AC57_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00365;old_locus_tag=AC57_5099 NZ_JJLR01000205.1 Protein Homology CDS 9952 11163 . - 0 ID=cds-WP_032268386.1-3;Parent=gene-AC57_RS00365;Dbxref=GenBank:WP_032268386.1;Name=WP_032268386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575701.1;locus_tag=AC57_RS00365;product=zonular occludens toxin domain-containing protein;protein_id=WP_032268386.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 11166 11522 . - . ID=gene-AC57_RS0125865;Name=AC57_RS0125865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125865;old_locus_tag=AC57_5100 NZ_JJLR01000205.1 GeneMarkS-2+ CDS 11166 11522 . - 0 ID=cds-WP_000494577.1-3;Parent=gene-AC57_RS0125865;Dbxref=GenBank:WP_000494577.1;Name=WP_000494577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0125865;product=hypothetical protein;protein_id=WP_000494577.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 11525 12832 . - . ID=gene-AC57_RS26125;Name=AC57_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26125;old_locus_tag=AC57_5101 NZ_JJLR01000205.1 GeneMarkS-2+ CDS 11525 12832 . - 0 ID=cds-WP_148725149.1-3;Parent=gene-AC57_RS26125;Dbxref=GenBank:WP_148725149.1;Name=WP_148725149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS26125;product=hypothetical protein;protein_id=WP_148725149.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 12893 13135 . - . ID=gene-AC57_RS00360;Name=AC57_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00360;old_locus_tag=AC57_5102 NZ_JJLR01000205.1 Protein Homology CDS 12893 13135 . - 0 ID=cds-WP_032179868.1-3;Parent=gene-AC57_RS00360;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AC57_RS00360;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 13160 13330 . - . ID=gene-AC57_RS30390;Name=AC57_RS30390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30390;old_locus_tag=AC57_5103 NZ_JJLR01000205.1 Protein Homology CDS 13160 13330 . - 0 ID=cds-WP_000134226.1-3;Parent=gene-AC57_RS30390;Dbxref=GenBank:WP_000134226.1;Name=WP_000134226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AC57_RS30390;product=hypothetical protein;protein_id=WP_000134226.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 13323 13463 . - . ID=gene-AC57_RS30395;Name=AC57_RS30395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30395;old_locus_tag=AC57_5104 NZ_JJLR01000205.1 Protein Homology CDS 13323 13463 . - 0 ID=cds-WP_001422058.1-3;Parent=gene-AC57_RS30395;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AC57_RS30395;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 13468 13893 . - . ID=gene-AC57_RS00355;Name=AC57_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00355;old_locus_tag=AC57_5105 NZ_JJLR01000205.1 Protein Homology CDS 13468 13893 . - 0 ID=cds-WP_032179869.1-3;Parent=gene-AC57_RS00355;Dbxref=GenBank:WP_032179869.1;Name=WP_032179869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AC57_RS00355;product=hypothetical protein;protein_id=WP_032179869.1;transl_table=11 NZ_JJLR01000205.1 RefSeq gene 13924 15924 . - . ID=gene-AC57_RS00350;Name=AC57_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00350;old_locus_tag=AC57_5106 NZ_JJLR01000205.1 Protein Homology CDS 13924 15924 . - 0 ID=cds-WP_032279731.1-3;Parent=gene-AC57_RS00350;Dbxref=GenBank:WP_032279731.1;Name=WP_032279731.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575774.1;locus_tag=AC57_RS00350;product=replication endonuclease;protein_id=WP_032279731.1;transl_table=11 ##sequence-region NZ_JJLR01000206.1 1 1608 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000206.1 RefSeq region 1 1608 . + . ID=NZ_JJLR01000206.1:1..1608;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000206.1 RefSeq pseudogene 1 1608 . + . ID=gene-AC57_RS00345;Name=rhsC;end_range=1608,.;gbkey=Gene;gene=rhsC;gene_biotype=pseudogene;locus_tag=AC57_RS00345;old_locus_tag=AC57_5107;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000206.1 Protein Homology CDS 1 1608 . + 0 ID=cds-AC57_RS00345;Parent=gene-AC57_RS00345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1608,.;gbkey=CDS;gene=rhsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415229.1;locus_tag=AC57_RS00345;partial=true;product=rhs element protein RhsC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000207.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000207.1 RefSeq region 1 2047 . + . ID=NZ_JJLR01000207.1:1..2047;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000207.1 RefSeq gene 1 1414 . - . ID=gene-AC57_RS00340;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AC57_RS00340;old_locus_tag=AC57_5108;partial=true;start_range=.,1 NZ_JJLR01000207.1 Protein Homology CDS 1 1414 . - 0 ID=cds-WP_032261594.1;Parent=gene-AC57_RS00340;Dbxref=GenBank:WP_032261594.1;Name=WP_032261594.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418440.1;locus_tag=AC57_RS00340;partial=true;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_032261594.1;start_range=.,1;transl_table=11 NZ_JJLR01000207.1 RefSeq pseudogene 1695 2047 . - . ID=gene-AC57_RS00335;Name=AC57_RS00335;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00335;old_locus_tag=AC57_5110;partial=true;pseudo=true NZ_JJLR01000207.1 Protein Homology CDS 1695 2047 . - 2 ID=cds-AC57_RS00335;Parent=gene-AC57_RS00335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418439.1;locus_tag=AC57_RS00335;partial=true;product=isocitrate lyase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000208.1 1 660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000208.1 RefSeq region 1 660 . + . ID=NZ_JJLR01000208.1:1..660;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000208.1 RefSeq gene 1 660 . + . ID=gene-AC57_RS00330;Name=AC57_RS00330;end_range=660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00330;old_locus_tag=AC57_5111;partial=true;start_range=.,1 NZ_JJLR01000208.1 Protein Homology CDS 1 660 . + 2 ID=cds-WP_032285798.1;Parent=gene-AC57_RS00330;Dbxref=GenBank:WP_032285798.1;Name=WP_032285798.1;end_range=660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309675.1;locus_tag=AC57_RS00330;partial=true;product=phage tail tip protein J-related protein;protein_id=WP_032285798.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000209.1 1 27437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000209.1 RefSeq region 1 27437 . + . ID=NZ_JJLR01000209.1:1..27437;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000209.1 RefSeq gene 1 385 . - . ID=gene-AC57_RS00325;Name=AC57_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00325;old_locus_tag=AC57_5112;partial=true;start_range=.,1 NZ_JJLR01000209.1 Protein Homology CDS 1 385 . - 0 ID=cds-WP_001700897.1;Parent=gene-AC57_RS00325;Dbxref=GenBank:WP_001700897.1;Name=WP_001700897.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC57_RS00325;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_001700897.1;start_range=.,1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 747 3530 . - . ID=gene-AC57_RS00320;Name=pqqL;gbkey=Gene;gene=pqqL;gene_biotype=protein_coding;locus_tag=AC57_RS00320;old_locus_tag=AC57_5114 NZ_JJLR01000209.1 Protein Homology CDS 747 3530 . - 0 ID=cds-WP_032237762.1;Parent=gene-AC57_RS00320;Dbxref=GenBank:WP_032237762.1;Name=WP_032237762.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=pqqL;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AC57_RS00320;product=M16 family metallopeptidase;protein_id=WP_032237762.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 3587 5959 . - . ID=gene-AC57_RS00315;Name=yddB;gbkey=Gene;gene=yddB;gene_biotype=protein_coding;locus_tag=AC57_RS00315;old_locus_tag=AC57_5115 NZ_JJLR01000209.1 Protein Homology CDS 3587 5959 . - 0 ID=cds-WP_032267803.1;Parent=gene-AC57_RS00315;Dbxref=GenBank:WP_032267803.1;Name=WP_032267803.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;gene=yddB;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310127.1;locus_tag=AC57_RS00315;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_032267803.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 5997 7682 . - . ID=gene-AC57_RS00310;Name=yddA;gbkey=Gene;gene=yddA;gene_biotype=protein_coding;locus_tag=AC57_RS00310;old_locus_tag=AC57_5116 NZ_JJLR01000209.1 Protein Homology CDS 5997 7682 . - 0 ID=cds-WP_032237760.1;Parent=gene-AC57_RS00310;Dbxref=GenBank:WP_032237760.1;Name=WP_032237760.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yddA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AC57_RS00310;product=ABC transporter ATP-binding protein/permease;protein_id=WP_032237760.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 7885 8007 . + . ID=gene-AC57_RS30125;Name=AC57_RS30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30125 NZ_JJLR01000209.1 Protein Homology CDS 7885 8007 . + 0 ID=cds-WP_120795387.1;Parent=gene-AC57_RS30125;Dbxref=GenBank:WP_120795387.1;Name=WP_120795387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AC57_RS30125;product=protein YneP;protein_id=WP_120795387.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 7973 9130 . - . ID=gene-AC57_RS00305;Name=ydeM;gbkey=Gene;gene=ydeM;gene_biotype=protein_coding;locus_tag=AC57_RS00305;old_locus_tag=AC57_5117 NZ_JJLR01000209.1 Protein Homology CDS 7973 9130 . - 0 ID=cds-WP_001299007.1;Parent=gene-AC57_RS00305;Dbxref=GenBank:WP_001299007.1;Name=WP_001299007.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=ydeM;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AC57_RS00305;product=anaerobic sulfatase maturase;protein_id=WP_001299007.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 9182 10864 . - . ID=gene-AC57_RS00300;Name=ydeN;gbkey=Gene;gene=ydeN;gene_biotype=protein_coding;locus_tag=AC57_RS00300;old_locus_tag=AC57_5118 NZ_JJLR01000209.1 Protein Homology CDS 9182 10864 . - 0 ID=cds-WP_032237759.1;Parent=gene-AC57_RS00300;Dbxref=GenBank:WP_032237759.1;Name=WP_032237759.1;Ontology_term=GO:0008484;gbkey=CDS;gene=ydeN;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310130.2;locus_tag=AC57_RS00300;product=sulfatase-like hydrolase/transferase;protein_id=WP_032237759.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 11268 12029 . - . ID=gene-AC57_RS00295;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AC57_RS00295;old_locus_tag=AC57_5119 NZ_JJLR01000209.1 Protein Homology CDS 11268 12029 . - 0 ID=cds-WP_000060458.1;Parent=gene-AC57_RS00295;Dbxref=GenBank:WP_000060458.1;Name=WP_000060458.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310131.1;locus_tag=AC57_RS00295;product=acid stress response transcriptional regulator YdeO;protein_id=WP_000060458.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 12104 12301 . - . ID=gene-AC57_RS0125890;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AC57_RS0125890 NZ_JJLR01000209.1 Protein Homology CDS 12104 12301 . - 0 ID=cds-WP_000543389.1;Parent=gene-AC57_RS0125890;Dbxref=GenBank:WP_000543389.1;Name=WP_000543389.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=AC57_RS0125890;product=two-component system connector SafA;protein_id=WP_000543389.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 12549 14828 . - . ID=gene-AC57_RS00290;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AC57_RS00290;old_locus_tag=AC57_5120 NZ_JJLR01000209.1 Protein Homology CDS 12549 14828 . - 0 ID=cds-WP_000726695.1;Parent=gene-AC57_RS00290;Dbxref=GenBank:WP_000726695.1;Name=WP_000726695.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AC57_RS00290;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_000726695.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 15162 16076 . - . ID=gene-AC57_RS00285;Name=ydeQ;gbkey=Gene;gene=ydeQ;gene_biotype=protein_coding;locus_tag=AC57_RS00285;old_locus_tag=AC57_5121 NZ_JJLR01000209.1 Protein Homology CDS 15162 16076 . - 0 ID=cds-WP_032237758.1;Parent=gene-AC57_RS00285;Dbxref=GenBank:WP_032237758.1;Name=WP_032237758.1;gbkey=CDS;gene=ydeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310134.1;locus_tag=AC57_RS00285;product=fimbrial protein;protein_id=WP_032237758.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 16135 16638 . - . ID=gene-AC57_RS0125895;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;locus_tag=AC57_RS0125895 NZ_JJLR01000209.1 Protein Homology CDS 16135 16638 . - 0 ID=cds-WP_000825448.1;Parent=gene-AC57_RS0125895;Dbxref=GenBank:WP_000825448.1;Name=WP_000825448.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416020.1;locus_tag=AC57_RS0125895;product=fimbrial protein;protein_id=WP_000825448.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 16651 17181 . - . ID=gene-AC57_RS00280;Name=ydeS;gbkey=Gene;gene=ydeS;gene_biotype=protein_coding;locus_tag=AC57_RS00280;old_locus_tag=AC57_5124 NZ_JJLR01000209.1 Protein Homology CDS 16651 17181 . - 0 ID=cds-WP_000876763.1;Parent=gene-AC57_RS00280;Dbxref=GenBank:WP_000876763.1;Name=WP_000876763.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416021.1;locus_tag=AC57_RS00280;product=fimbrial protein;protein_id=WP_000876763.1;transl_table=11 NZ_JJLR01000209.1 RefSeq pseudogene 17195 18421 . - . ID=gene-AC57_RS00275;Name=ydeT;end_range=18421,.;gbkey=Gene;gene=ydeT;gene_biotype=pseudogene;locus_tag=AC57_RS00275;old_locus_tag=AC57_5125;partial=true;pseudo=true NZ_JJLR01000209.1 Protein Homology CDS 17195 18421 . - 0 ID=cds-AC57_RS00275;Parent=gene-AC57_RS00275;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=18421,.;gbkey=CDS;gene=ydeT;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AC57_RS00275;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;transl_table=11 NZ_JJLR01000209.1 RefSeq pseudogene 18676 18884 . - . ID=gene-AC57_RS0125900;Name=AC57_RS0125900;end_range=18884,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125900;partial=true;pseudo=true NZ_JJLR01000209.1 Protein Homology CDS 18676 18884 . - 0 ID=cds-AC57_RS0125900;Parent=gene-AC57_RS0125900;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=18884,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=AC57_RS0125900;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 19174 20382 . - . ID=gene-AC57_RS00270;Name=AC57_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00270;old_locus_tag=AC57_5126 NZ_JJLR01000209.1 Protein Homology CDS 19174 20382 . - 0 ID=cds-WP_077756481.1-2;Parent=gene-AC57_RS00270;Dbxref=GenBank:WP_077756481.1;Name=WP_077756481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575699.1;locus_tag=AC57_RS00270;product=type II secretion system protein GspD;protein_id=WP_077756481.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 20830 22041 . - . ID=gene-AC57_RS00265;Name=AC57_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00265;old_locus_tag=AC57_5128 NZ_JJLR01000209.1 Protein Homology CDS 20830 22041 . - 0 ID=cds-WP_032268386.1-4;Parent=gene-AC57_RS00265;Dbxref=GenBank:WP_032268386.1;Name=WP_032268386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575701.1;locus_tag=AC57_RS00265;product=zonular occludens toxin domain-containing protein;protein_id=WP_032268386.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 22044 22400 . - . ID=gene-AC57_RS0125905;Name=AC57_RS0125905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125905;old_locus_tag=AC57_5129 NZ_JJLR01000209.1 GeneMarkS-2+ CDS 22044 22400 . - 0 ID=cds-WP_000494577.1-4;Parent=gene-AC57_RS0125905;Dbxref=GenBank:WP_000494577.1;Name=WP_000494577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS0125905;product=hypothetical protein;protein_id=WP_000494577.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 22403 23710 . - . ID=gene-AC57_RS26130;Name=AC57_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS26130;old_locus_tag=AC57_5130 NZ_JJLR01000209.1 GeneMarkS-2+ CDS 22403 23710 . - 0 ID=cds-WP_148725149.1-4;Parent=gene-AC57_RS26130;Dbxref=GenBank:WP_148725149.1;Name=WP_148725149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS26130;product=hypothetical protein;protein_id=WP_148725149.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 23771 24013 . - . ID=gene-AC57_RS00260;Name=AC57_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00260;old_locus_tag=AC57_5131 NZ_JJLR01000209.1 Protein Homology CDS 23771 24013 . - 0 ID=cds-WP_032179868.1-4;Parent=gene-AC57_RS00260;Dbxref=GenBank:WP_032179868.1;Name=WP_032179868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769874.1;locus_tag=AC57_RS00260;product=hypothetical protein;protein_id=WP_032179868.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 24038 24208 . - . ID=gene-AC57_RS30400;Name=AC57_RS30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30400;old_locus_tag=AC57_5132 NZ_JJLR01000209.1 Protein Homology CDS 24038 24208 . - 0 ID=cds-WP_000134226.1-4;Parent=gene-AC57_RS30400;Dbxref=GenBank:WP_000134226.1;Name=WP_000134226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134226.1;locus_tag=AC57_RS30400;product=hypothetical protein;protein_id=WP_000134226.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 24201 24341 . - . ID=gene-AC57_RS30405;Name=AC57_RS30405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30405;old_locus_tag=AC57_5133 NZ_JJLR01000209.1 Protein Homology CDS 24201 24341 . - 0 ID=cds-WP_001422058.1-4;Parent=gene-AC57_RS30405;Dbxref=GenBank:WP_001422058.1;Name=WP_001422058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278129.1;locus_tag=AC57_RS30405;product=hypothetical protein;protein_id=WP_001422058.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 24346 24771 . - . ID=gene-AC57_RS00255;Name=AC57_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00255;old_locus_tag=AC57_5134 NZ_JJLR01000209.1 Protein Homology CDS 24346 24771 . - 0 ID=cds-WP_032179869.1-4;Parent=gene-AC57_RS00255;Dbxref=GenBank:WP_032179869.1;Name=WP_032179869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575773.1;locus_tag=AC57_RS00255;product=hypothetical protein;protein_id=WP_032179869.1;transl_table=11 NZ_JJLR01000209.1 RefSeq gene 24802 26802 . - . ID=gene-AC57_RS00250;Name=AC57_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00250;old_locus_tag=AC57_5135 NZ_JJLR01000209.1 Protein Homology CDS 24802 26802 . - 0 ID=cds-WP_032279731.1-4;Parent=gene-AC57_RS00250;Dbxref=GenBank:WP_032279731.1;Name=WP_032279731.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575774.1;locus_tag=AC57_RS00250;product=replication endonuclease;protein_id=WP_032279731.1;transl_table=11 ##sequence-region NZ_JJLR01000210.1 1 332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000210.1 RefSeq region 1 332 . + . ID=NZ_JJLR01000210.1:1..332;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000210.1 RefSeq gene 1 309 . + . ID=gene-AC57_RS00245;Name=AC57_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00245;old_locus_tag=AC57_5136;partial=true;start_range=.,1 NZ_JJLR01000210.1 Protein Homology CDS 1 309 . + 0 ID=cds-WP_000001668.1;Parent=gene-AC57_RS00245;Dbxref=GenBank:WP_000001668.1;Name=WP_000001668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC57_RS00245;partial=true;product=IS3 family transposase;protein_id=WP_000001668.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLR01000211.1 1 1558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000211.1 RefSeq region 1 1558 . + . ID=NZ_JJLR01000211.1:1..1558;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000211.1 RefSeq gene 1 260 . + . ID=gene-AC57_RS00240;Name=AC57_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00240;old_locus_tag=AC57_5137;partial=true;start_range=.,1 NZ_JJLR01000211.1 Protein Homology CDS 1 260 . + 2 ID=cds-WP_000642053.1-4;Parent=gene-AC57_RS00240;Dbxref=GenBank:WP_000642053.1;Name=WP_000642053.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS00240;partial=true;product=IS1 family transposase;protein_id=WP_000642053.1;start_range=.,1;transl_table=11 NZ_JJLR01000211.1 RefSeq gene 455 1048 . - . ID=gene-AC57_RS00235;Name=AC57_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00235;old_locus_tag=AC57_5138 NZ_JJLR01000211.1 Protein Homology CDS 455 1048 . - 0 ID=cds-WP_032280163.1;Parent=gene-AC57_RS00235;Dbxref=GenBank:WP_032280163.1;Name=WP_032280163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000517690.1;locus_tag=AC57_RS00235;product=ProQ/FINO family protein;protein_id=WP_032280163.1;transl_table=11 NZ_JJLR01000211.1 RefSeq pseudogene 1167 1355 . - . ID=gene-AC57_RS30930;Name=AC57_RS30930;end_range=1355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30930;partial=true;pseudo=true NZ_JJLR01000211.1 Protein Homology CDS 1167 1355 . - 0 ID=cds-AC57_RS30930;Parent=gene-AC57_RS30930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530481.1;locus_tag=AC57_RS30930;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLR01000211.1 RefSeq gene 1411 1558 . + . ID=gene-AC57_RS28500;Name=AC57_RS28500;end_range=1558,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28500;old_locus_tag=AC57_5139;partial=true NZ_JJLR01000211.1 Protein Homology CDS 1411 1558 . + 0 ID=cds-WP_136697469.1;Parent=gene-AC57_RS28500;Dbxref=GenBank:WP_136697469.1;Name=WP_136697469.1;Ontology_term=GO:0006313;end_range=1558,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC57_RS28500;partial=true;product=IS1 family transposase;protein_id=WP_136697469.1;transl_table=11 ##sequence-region NZ_JJLR01000212.1 1 3376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000212.1 RefSeq region 1 3376 . + . ID=NZ_JJLR01000212.1:1..3376;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000212.1 RefSeq gene 1 186 . - . ID=gene-AC57_RS30935;Name=AC57_RS30935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30935;partial=true;start_range=.,1 NZ_JJLR01000212.1 GeneMarkS-2+ CDS 1 186 . - 0 ID=cds-WP_282896365.1-2;Parent=gene-AC57_RS30935;Dbxref=GenBank:WP_282896365.1;Name=WP_282896365.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30935;partial=true;product=hypothetical protein;protein_id=WP_282896365.1;start_range=.,1;transl_table=11 NZ_JJLR01000212.1 RefSeq gene 615 2123 . + . ID=gene-AC57_RS00230;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=AC57_RS00230;old_locus_tag=AC57_5141 NZ_JJLR01000212.1 Protein Homology CDS 615 2123 . + 0 ID=cds-WP_001189111.1-5;Parent=gene-AC57_RS00230;Dbxref=GenBank:WP_001189111.1;Name=WP_001189111.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC57_RS00230;product=group II intron reverse transcriptase/maturase;protein_id=WP_001189111.1;transl_table=11 NZ_JJLR01000212.1 RefSeq pseudogene 2207 2626 . + . ID=gene-AC57_RS0125930;Name=AC57_RS0125930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125930;old_locus_tag=AC57_5142;partial=true;pseudo=true;start_range=.,2207 NZ_JJLR01000212.1 Protein Homology CDS 2207 2626 . + 0 ID=cds-AC57_RS0125930;Parent=gene-AC57_RS0125930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558160.1;locus_tag=AC57_RS0125930;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2207;transl_table=11 NZ_JJLR01000212.1 RefSeq gene 2708 3142 . + . ID=gene-AC57_RS00225;Name=AC57_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00225;old_locus_tag=AC57_5143 NZ_JJLR01000212.1 Protein Homology CDS 2708 3142 . + 0 ID=cds-WP_001309734.1-4;Parent=gene-AC57_RS00225;Dbxref=GenBank:WP_001309734.1;Name=WP_001309734.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC57_RS00225;product=transposase;protein_id=WP_001309734.1;transl_table=11 NZ_JJLR01000212.1 RefSeq gene 3139 3376 . + . ID=gene-AC57_RS0125935;Name=tnpB;end_range=3376,.;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS0125935;old_locus_tag=AC57_5144;partial=true NZ_JJLR01000212.1 Protein Homology CDS 3139 3376 . + 0 ID=cds-WP_032285719.1-2;Parent=gene-AC57_RS0125935;Dbxref=GenBank:WP_032285719.1;Name=WP_032285719.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;end_range=3376,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS0125935;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032285719.1;transl_table=11 ##sequence-region NZ_JJLR01000213.1 1 8341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000213.1 RefSeq region 1 8341 . + . ID=NZ_JJLR01000213.1:1..8341;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000213.1 RefSeq gene 1 203 . + . ID=gene-AC57_RS00220;Name=AC57_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00220;old_locus_tag=AC57_5145;partial=true;start_range=.,1 NZ_JJLR01000213.1 Protein Homology CDS 1 203 . + 2 ID=cds-WP_001666051.1-3;Parent=gene-AC57_RS00220;Dbxref=GenBank:WP_001666051.1;Name=WP_001666051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC57_RS00220;partial=true;product=IS66 family transposase;protein_id=WP_001666051.1;start_range=.,1;transl_table=11 NZ_JJLR01000213.1 RefSeq gene 259 609 . - . ID=gene-AC57_RS00215;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00215;old_locus_tag=AC57_5146 NZ_JJLR01000213.1 Protein Homology CDS 259 609 . - 0 ID=cds-WP_000624722.1-4;Parent=gene-AC57_RS00215;Dbxref=GenBank:WP_000624722.1;Name=WP_000624722.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC57_RS00215;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624722.1;transl_table=11 NZ_JJLR01000213.1 RefSeq gene 606 1031 . - . ID=gene-AC57_RS00210;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS00210;old_locus_tag=AC57_5147 NZ_JJLR01000213.1 Protein Homology CDS 606 1031 . - 0 ID=cds-WP_000422741.1-3;Parent=gene-AC57_RS00210;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC57_RS00210;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLR01000213.1 RefSeq pseudogene 1411 1585 . + . ID=gene-AC57_RS28510;Name=AC57_RS28510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28510;partial=true;pseudo=true;start_range=.,1411 NZ_JJLR01000213.1 Protein Homology CDS 1411 1585 . + 0 ID=cds-AC57_RS28510;Parent=gene-AC57_RS28510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AC57_RS28510;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1411;transl_table=11 NZ_JJLR01000213.1 RefSeq gene 1684 2118 . - . ID=gene-AC57_RS00205;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AC57_RS00205;old_locus_tag=AC57_5148 NZ_JJLR01000213.1 Protein Homology CDS 1684 2118 . - 0 ID=cds-WP_001575710.1;Parent=gene-AC57_RS00205;Dbxref=GenBank:WP_001575710.1;Name=WP_001575710.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AC57_RS00205;product=conjugation system SOS inhibitor PsiB;protein_id=WP_001575710.1;transl_table=11 NZ_JJLR01000213.1 RefSeq pseudogene 2913 3140 . - . ID=gene-AC57_RS0125945;Name=AC57_RS0125945;end_range=3140,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS0125945;partial=true;pseudo=true NZ_JJLR01000213.1 Protein Homology CDS 2913 3140 . - 0 ID=cds-AC57_RS0125945;Parent=gene-AC57_RS0125945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3140,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=AC57_RS0125945;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLR01000213.1 RefSeq pseudogene 3213 3772 . - . ID=gene-AC57_RS0125950;Name=istB;end_range=3772,.;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AC57_RS0125950;old_locus_tag=AC57_5151;partial=true;pseudo=true NZ_JJLR01000213.1 Protein Homology CDS 3213 3772 . - 0 ID=cds-AC57_RS0125950;Parent=gene-AC57_RS0125950;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3772,.;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AC57_RS0125950;partial=true;product=IS21-like element IS21 family helper ATPase IstB;pseudo=true;transl_table=11 NZ_JJLR01000213.1 RefSeq pseudogene 3875 4027 . - . ID=gene-AC57_RS28520;Name=AC57_RS28520;end_range=4027,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28520;old_locus_tag=AC57_5152;partial=true;pseudo=true;start_range=.,3875 NZ_JJLR01000213.1 Protein Homology CDS 3875 4027 . - 0 ID=cds-AC57_RS28520;Parent=gene-AC57_RS28520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4027,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=AC57_RS28520;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,3875;transl_table=11 NZ_JJLR01000213.1 RefSeq gene 4797 5498 . + . ID=gene-AC57_RS00200;Name=AC57_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00200;old_locus_tag=AC57_5153 NZ_JJLR01000213.1 Protein Homology CDS 4797 5498 . + 0 ID=cds-WP_001575713.1;Parent=gene-AC57_RS00200;Dbxref=GenBank:WP_001575713.1;Name=WP_001575713.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724992.1;locus_tag=AC57_RS00200;product=replication initiation protein;protein_id=WP_001575713.1;transl_table=11 NZ_JJLR01000213.1 RefSeq pseudogene 5669 6174 . + . ID=gene-AC57_RS29525;Name=AC57_RS29525;end_range=6174,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS29525;old_locus_tag=AC57_5154;partial=true;pseudo=true NZ_JJLR01000213.1 Protein Homology CDS 5669 6174 . + 0 ID=cds-AC57_RS29525;Parent=gene-AC57_RS29525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=6174,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AC57_RS29525;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLR01000213.1 RefSeq gene 6320 7933 . - . ID=gene-AC57_RS00190;Name=AC57_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00190;old_locus_tag=AC57_5155 NZ_JJLR01000213.1 Protein Homology CDS 6320 7933 . - 0 ID=cds-WP_000080172.1-5;Parent=gene-AC57_RS00190;Dbxref=GenBank:WP_000080172.1;Name=WP_000080172.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS00190;product=IS66-like element ISEc43 family transposase;protein_id=WP_000080172.1;transl_table=11 NZ_JJLR01000213.1 RefSeq gene 7964 8314 . - . ID=gene-AC57_RS00185;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00185;old_locus_tag=AC57_5156 NZ_JJLR01000213.1 Protein Homology CDS 7964 8314 . - 0 ID=cds-WP_000624688.1-7;Parent=gene-AC57_RS00185;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC57_RS00185;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 ##sequence-region NZ_JJLR01000214.1 1 1582 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000214.1 RefSeq region 1 1582 . + . ID=NZ_JJLR01000214.1:1..1582;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000214.1 RefSeq pseudogene 1 285 . + . ID=gene-AC57_RS00180;Name=AC57_RS00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00180;old_locus_tag=AC57_5157;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000214.1 Protein Homology CDS 1 285 . + 0 ID=cds-AC57_RS00180;Parent=gene-AC57_RS00180;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS00180;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000214.1 RefSeq gene 432 1139 . + . ID=gene-AC57_RS00175;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AC57_RS00175;old_locus_tag=AC57_5158 NZ_JJLR01000214.1 Protein Homology CDS 432 1139 . + 0 ID=cds-WP_000367023.1;Parent=gene-AC57_RS00175;Dbxref=GenBank:WP_000367023.1;Name=WP_000367023.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AC57_RS00175;product=DUF1266 domain-containing protein;protein_id=WP_000367023.1;transl_table=11 NZ_JJLR01000214.1 RefSeq pseudogene 1136 1282 . + . ID=gene-AC57_RS00170;Name=AC57_RS00170;end_range=1282,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00170;old_locus_tag=AC57_5159;partial=true;pseudo=true NZ_JJLR01000214.1 Protein Homology CDS 1136 1282 . + 0 ID=cds-AC57_RS00170;Parent=gene-AC57_RS00170;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415179.1;locus_tag=AC57_RS00170;partial=true;product=J domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000214.1 RefSeq gene 1338 1582 . + . ID=gene-AC57_RS00165;Name=AC57_RS00165;end_range=1582,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00165;old_locus_tag=AC57_5160;partial=true NZ_JJLR01000214.1 Protein Homology CDS 1338 1582 . + 0 ID=cds-WP_001473862.1-2;Parent=gene-AC57_RS00165;Dbxref=GenBank:WP_001473862.1;Name=WP_001473862.1;end_range=1582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC57_RS00165;partial=true;product=IS1-like element transposase;protein_id=WP_001473862.1;transl_table=11 ##sequence-region NZ_JJLR01000215.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000215.1 RefSeq region 1 2047 . + . ID=NZ_JJLR01000215.1:1..2047;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000215.1 RefSeq gene 1 196 . + . ID=gene-AC57_RS30410;Name=AC57_RS30410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30410;old_locus_tag=AC57_5161;partial=true;start_range=.,1 NZ_JJLR01000215.1 GeneMarkS-2+ CDS 1 196 . + 1 ID=cds-WP_032285800.1;Parent=gene-AC57_RS30410;Dbxref=GenBank:WP_032285800.1;Name=WP_032285800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS30410;partial=true;product=protein YahH;protein_id=WP_032285800.1;start_range=.,1;transl_table=11 NZ_JJLR01000215.1 RefSeq gene 272 1222 . + . ID=gene-AC57_RS00155;Name=AC57_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00155;old_locus_tag=AC57_5162 NZ_JJLR01000215.1 Protein Homology CDS 272 1222 . + 0 ID=cds-WP_000661672.1-2;Parent=gene-AC57_RS00155;Dbxref=GenBank:WP_000661672.1;Name=WP_000661672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414857.1;locus_tag=AC57_RS00155;product=carbamate kinase family protein;protein_id=WP_000661672.1;transl_table=11 NZ_JJLR01000215.1 RefSeq pseudogene 1232 2047 . + . ID=gene-AC57_RS00150;Name=AC57_RS00150;end_range=2047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00150;old_locus_tag=AC57_5163;partial=true;pseudo=true NZ_JJLR01000215.1 Protein Homology CDS 1232 2047 . + 0 ID=cds-AC57_RS00150;Parent=gene-AC57_RS00150;Note=metallo-dependent hydrolase superfamily%3B deaminase with metallo-dependent hydrolase domain%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AC57_RS00150;partial=true;product=deaminase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLR01000216.1 1 336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000216.1 RefSeq region 1 336 . + . ID=NZ_JJLR01000216.1:1..336;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000216.1 RefSeq gene 1 336 . - . ID=gene-AC57_RS0125970;Name=AC57_RS0125970;end_range=336,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC57_RS0125970;partial=true;start_range=.,1 NZ_JJLR01000216.1 cmsearch rRNA 1 336 . - . ID=rna-AC57_RS0125970;Parent=gene-AC57_RS0125970;Dbxref=RFAM:RF00177;end_range=336,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125970;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLR01000216.1 cmsearch exon 1 336 . - . ID=exon-AC57_RS0125970-1;Parent=rna-AC57_RS0125970;Dbxref=RFAM:RF00177;end_range=336,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS0125970;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJLR01000217.1 1 6281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000217.1 RefSeq region 1 6281 . + . ID=NZ_JJLR01000217.1:1..6281;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000217.1 RefSeq gene 31 1602 . - . ID=gene-AC57_RS00145;Name=AC57_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00145;old_locus_tag=AC57_5164 NZ_JJLR01000217.1 Protein Homology CDS 31 1602 . - 0 ID=cds-WP_032280090.1-4;Parent=gene-AC57_RS00145;Dbxref=GenBank:WP_032280090.1;Name=WP_032280090.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC57_RS00145;product=IS66-like element ISCro1 family transposase;protein_id=WP_032280090.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 1622 1969 . - . ID=gene-AC57_RS00140;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00140;old_locus_tag=AC57_5165 NZ_JJLR01000217.1 Protein Homology CDS 1622 1969 . - 0 ID=cds-WP_000624622.1-5;Parent=gene-AC57_RS00140;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC57_RS00140;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 1969 2616 . - . ID=gene-AC57_RS00135;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS00135;old_locus_tag=AC57_5166 NZ_JJLR01000217.1 Protein Homology CDS 1969 2616 . - 0 ID=cds-WP_001295212.1;Parent=gene-AC57_RS00135;Dbxref=GenBank:WP_001295212.1;Name=WP_001295212.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355812.1;locus_tag=AC57_RS00135;product=IS66-like element accessory protein TnpA;protein_id=WP_001295212.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 3194 4327 . + . ID=gene-AC57_RS00130;Name=AC57_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00130;old_locus_tag=AC57_5167 NZ_JJLR01000217.1 Protein Homology CDS 3194 4327 . + 0 ID=cds-WP_000545983.1;Parent=gene-AC57_RS00130;Dbxref=GenBank:WP_000545983.1;Name=WP_000545983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483870.1;locus_tag=AC57_RS00130;product=DUF3800 domain-containing protein;protein_id=WP_000545983.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 4347 4631 . + . ID=gene-AC57_RS00125;Name=AC57_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00125;old_locus_tag=AC57_5168 NZ_JJLR01000217.1 Protein Homology CDS 4347 4631 . + 0 ID=cds-WP_000642771.1;Parent=gene-AC57_RS00125;Dbxref=GenBank:WP_000642771.1;Name=WP_000642771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642771.1;locus_tag=AC57_RS00125;product=hypothetical protein;protein_id=WP_000642771.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 4628 4825 . - . ID=gene-AC57_RS0125975;Name=AC57_RS0125975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS0125975 NZ_JJLR01000217.1 Protein Homology CDS 4628 4825 . - 0 ID=cds-WP_000215657.1;Parent=gene-AC57_RS0125975;Dbxref=GenBank:WP_000215657.1;Name=WP_000215657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215657.1;locus_tag=AC57_RS0125975;product=hypothetical protein;protein_id=WP_000215657.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 5175 5435 . + . ID=gene-AC57_RS00120;Name=AC57_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00120;old_locus_tag=AC57_5169 NZ_JJLR01000217.1 Protein Homology CDS 5175 5435 . + 0 ID=cds-WP_032280099.1;Parent=gene-AC57_RS00120;Dbxref=GenBank:WP_032280099.1;Name=WP_032280099.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906492.1;locus_tag=AC57_RS00120;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_032280099.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 5500 5718 . + . ID=gene-AC57_RS00115;Name=AC57_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00115;old_locus_tag=AC57_5170 NZ_JJLR01000217.1 Protein Homology CDS 5500 5718 . + 0 ID=cds-WP_370427799.1;Parent=gene-AC57_RS00115;Dbxref=GenBank:WP_370427799.1;Name=WP_370427799.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017896146.1;locus_tag=AC57_RS00115;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_370427799.1;transl_table=11 NZ_JJLR01000217.1 RefSeq gene 5860 6281 . - . ID=gene-AC57_RS28525;Name=AC57_RS28525;end_range=6281,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS28525;old_locus_tag=AC57_5171;partial=true NZ_JJLR01000217.1 Protein Homology CDS 5860 6281 . - 2 ID=cds-WP_032285700.1-2;Parent=gene-AC57_RS28525;Dbxref=GenBank:WP_032285700.1;Name=WP_032285700.1;end_range=6281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC57_RS28525;partial=true;product=IS66 family transposase;protein_id=WP_032285700.1;transl_table=11 ##sequence-region NZ_JJLR01000218.1 1 4416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000218.1 RefSeq region 1 4416 . + . ID=NZ_JJLR01000218.1:1..4416;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000218.1 RefSeq pseudogene 1 307 . + . ID=gene-AC57_RS00105;Name=AC57_RS00105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS00105;old_locus_tag=AC57_5172;partial=true;pseudo=true;start_range=.,1 NZ_JJLR01000218.1 Protein Homology CDS 1 307 . + 1 ID=cds-AC57_RS00105;Parent=gene-AC57_RS00105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC57_RS00105;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLR01000218.1 RefSeq pseudogene 322 846 . - . ID=gene-AC57_RS30940;Name=AC57_RS30940;end_range=846,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS30940;old_locus_tag=AC57_5173;partial=true;pseudo=true NZ_JJLR01000218.1 Protein Homology CDS 322 846 . - 0 ID=cds-AC57_RS30940;Parent=gene-AC57_RS30940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=846,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308587.2;locus_tag=AC57_RS30940;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000218.1 RefSeq gene 849 1217 . - . ID=gene-AC57_RS00095;Name=ybbC;gbkey=Gene;gene=ybbC;gene_biotype=protein_coding;locus_tag=AC57_RS00095;old_locus_tag=AC57_5174 NZ_JJLR01000218.1 Protein Homology CDS 849 1217 . - 0 ID=cds-WP_000877768.1;Parent=gene-AC57_RS00095;Dbxref=GenBank:WP_000877768.1;Name=WP_000877768.1;gbkey=CDS;gene=ybbC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415031.1;locus_tag=AC57_RS00095;product=YbbC/YhhH family protein;protein_id=WP_000877768.1;transl_table=11 NZ_JJLR01000218.1 RefSeq pseudogene 1257 1724 . - . ID=gene-AC57_RS28530;Name=AC57_RS28530;end_range=1724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS28530;partial=true;pseudo=true NZ_JJLR01000218.1 Protein Homology CDS 1257 1724 . - 0 ID=cds-AC57_RS28530;Parent=gene-AC57_RS28530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415030.1;locus_tag=AC57_RS28530;partial=true;product=DUF4329 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLR01000218.1 RefSeq gene 1801 2448 . + . ID=gene-AC57_RS00085;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC57_RS00085;old_locus_tag=AC57_5176 NZ_JJLR01000218.1 Protein Homology CDS 1801 2448 . + 0 ID=cds-WP_032285802.1;Parent=gene-AC57_RS00085;Dbxref=GenBank:WP_032285802.1;Name=WP_032285802.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001355812.1;locus_tag=AC57_RS00085;product=IS66-like element accessory protein TnpA;protein_id=WP_032285802.1;transl_table=11 NZ_JJLR01000218.1 RefSeq gene 2448 2795 . + . ID=gene-AC57_RS00080;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC57_RS00080;old_locus_tag=AC57_5177 NZ_JJLR01000218.1 Protein Homology CDS 2448 2795 . + 0 ID=cds-WP_000624622.1-6;Parent=gene-AC57_RS00080;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC57_RS00080;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLR01000218.1 RefSeq gene 2815 4386 . + . ID=gene-AC57_RS00075;Name=AC57_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00075;old_locus_tag=AC57_5178 NZ_JJLR01000218.1 Protein Homology CDS 2815 4386 . + 0 ID=cds-WP_032280090.1-5;Parent=gene-AC57_RS00075;Dbxref=GenBank:WP_032280090.1;Name=WP_032280090.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC57_RS00075;product=IS66-like element ISCro1 family transposase;protein_id=WP_032280090.1;transl_table=11 ##sequence-region NZ_JJLR01000219.1 1 474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000219.1 RefSeq region 1 474 . + . ID=NZ_JJLR01000219.1:1..474;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000219.1 RefSeq gene 1 99 . + . ID=gene-AC57_RS26140;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS26140;old_locus_tag=AC57_5179;partial=true;start_range=.,1 NZ_JJLR01000219.1 cmsearch rRNA 1 99 . + . ID=rna-AC57_RS26140;Parent=gene-AC57_RS26140;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26140;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJLR01000219.1 cmsearch exon 1 99 . + . ID=exon-AC57_RS26140-1;Parent=rna-AC57_RS26140;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS26140;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JJLR01000219.1 RefSeq gene 114 189 . + . ID=gene-AC57_RS00070;Name=AC57_RS00070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00070;old_locus_tag=AC57_5180 NZ_JJLR01000219.1 tRNAscan-SE tRNA 114 189 . + . ID=rna-AC57_RS00070;Parent=gene-AC57_RS00070;anticodon=(pos:147..149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00070;product=tRNA-Thr NZ_JJLR01000219.1 tRNAscan-SE exon 114 189 . + . ID=exon-AC57_RS00070-1;Parent=rna-AC57_RS00070;anticodon=(pos:147..149);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00070;product=tRNA-Thr NZ_JJLR01000219.1 RefSeq gene 229 344 . + . ID=gene-AC57_RS00065;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC57_RS00065;old_locus_tag=AC57_5181 NZ_JJLR01000219.1 cmsearch rRNA 229 344 . + . ID=rna-AC57_RS00065;Parent=gene-AC57_RS00065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS00065;product=5S ribosomal RNA NZ_JJLR01000219.1 cmsearch exon 229 344 . + . ID=exon-AC57_RS00065-1;Parent=rna-AC57_RS00065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC57_RS00065;product=5S ribosomal RNA NZ_JJLR01000219.1 RefSeq gene 399 472 . + . ID=gene-AC57_RS00060;Name=AC57_RS00060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00060;old_locus_tag=AC57_5182 NZ_JJLR01000219.1 tRNAscan-SE tRNA 399 472 . + . ID=rna-AC57_RS00060;Parent=gene-AC57_RS00060;anticodon=(pos:433..435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00060;product=tRNA-Asp NZ_JJLR01000219.1 tRNAscan-SE exon 399 472 . + . ID=exon-AC57_RS00060-1;Parent=rna-AC57_RS00060;anticodon=(pos:433..435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00060;product=tRNA-Asp ##sequence-region NZ_JJLR01000220.1 1 5074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000220.1 RefSeq region 1 5074 . + . ID=NZ_JJLR01000220.1:1..5074;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000220.1 RefSeq gene 1 247 . - . ID=gene-AC57_RS00055;Name=AC57_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00055;old_locus_tag=AC57_5183;partial=true;start_range=.,1 NZ_JJLR01000220.1 Protein Homology CDS 1 247 . - 0 ID=cds-WP_001473862.1-3;Parent=gene-AC57_RS00055;Dbxref=GenBank:WP_001473862.1;Name=WP_001473862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC57_RS00055;partial=true;product=IS1-like element transposase;protein_id=WP_001473862.1;start_range=.,1;transl_table=11 NZ_JJLR01000220.1 RefSeq gene 298 504 . - . ID=gene-AC57_RS00050;Name=AC57_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00050;old_locus_tag=AC57_5184 NZ_JJLR01000220.1 GeneMarkS-2+ CDS 298 504 . - 0 ID=cds-WP_050440102.1;Parent=gene-AC57_RS00050;Dbxref=GenBank:WP_050440102.1;Name=WP_050440102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC57_RS00050;product=hypothetical protein;protein_id=WP_050440102.1;transl_table=11 NZ_JJLR01000220.1 RefSeq pseudogene 959 1042 . + . ID=gene-AC57_RS31315;Name=AC57_RS31315;end_range=1042,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC57_RS31315;partial=true;pseudo=true NZ_JJLR01000220.1 Protein Homology CDS 959 1042 . + 0 ID=cds-AC57_RS31315;Parent=gene-AC57_RS31315;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1042,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001447161.1;locus_tag=AC57_RS31315;partial=true;product=cell division inhibition protein DicB;pseudo=true;transl_table=11 NZ_JJLR01000220.1 RefSeq gene 1072 1923 . + . ID=gene-AC57_RS00045;Name=AC57_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00045;old_locus_tag=AC57_5186 NZ_JJLR01000220.1 Protein Homology CDS 1072 1923 . + 0 ID=cds-WP_032279698.1;Parent=gene-AC57_RS00045;Dbxref=GenBank:WP_032279698.1;Name=WP_032279698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000935589.1;locus_tag=AC57_RS00045;product=Rha family phage regulatory protein;protein_id=WP_032279698.1;transl_table=11 NZ_JJLR01000220.1 RefSeq gene 1934 2221 . + . ID=gene-AC57_RS00040;Name=AC57_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00040;old_locus_tag=AC57_5187 NZ_JJLR01000220.1 Protein Homology CDS 1934 2221 . + 0 ID=cds-WP_373415363.1;Parent=gene-AC57_RS00040;Dbxref=GenBank:WP_373415363.1;Name=WP_373415363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001343123.1;locus_tag=AC57_RS00040;product=YdaE family protein;protein_id=WP_373415363.1;transl_table=11 NZ_JJLR01000220.1 RefSeq gene 2296 2571 . + . ID=gene-AC57_RS00035;Name=AC57_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00035;old_locus_tag=AC57_5188 NZ_JJLR01000220.1 Protein Homology CDS 2296 2571 . + 0 ID=cds-WP_032279700.1;Parent=gene-AC57_RS00035;Dbxref=GenBank:WP_032279700.1;Name=WP_032279700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707272.2;locus_tag=AC57_RS00035;product=hypothetical protein;protein_id=WP_032279700.1;transl_table=11 NZ_JJLR01000220.1 RefSeq gene 2671 5074 . + . ID=gene-AC57_RS00030;Name=AC57_RS00030;end_range=5074,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00030;old_locus_tag=AC57_5189;partial=true NZ_JJLR01000220.1 Protein Homology CDS 2671 5074 . + 0 ID=cds-WP_032285803.1;Parent=gene-AC57_RS00030;Dbxref=GenBank:WP_032285803.1;Name=WP_032285803.1;end_range=5074,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102181.1;locus_tag=AC57_RS00030;partial=true;product=exonuclease;protein_id=WP_032285803.1;transl_table=11 ##sequence-region NZ_JJLR01000221.1 1 557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000221.1 RefSeq region 1 557 . + . ID=NZ_JJLR01000221.1:1..557;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000221.1 RefSeq gene 1 111 . + . ID=gene-AC57_RS30945;Name=AC57_RS30945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS30945;old_locus_tag=AC57_5190;partial=true;start_range=.,1 NZ_JJLR01000221.1 Protein Homology CDS 1 111 . + 0 ID=cds-WP_249401517.1;Parent=gene-AC57_RS30945;Dbxref=GenBank:WP_249401517.1;Name=WP_249401517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AC57_RS30945;partial=true;product=hypothetical protein;protein_id=WP_249401517.1;start_range=.,1;transl_table=11 NZ_JJLR01000221.1 RefSeq gene 214 290 . + . ID=gene-AC57_RS00025;Name=AC57_RS00025;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00025;old_locus_tag=AC57_5191 NZ_JJLR01000221.1 tRNAscan-SE tRNA 214 290 . + . ID=rna-AC57_RS00025;Parent=gene-AC57_RS00025;anticodon=(pos:248..250);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00025;product=tRNA-Arg NZ_JJLR01000221.1 tRNAscan-SE exon 214 290 . + . ID=exon-AC57_RS00025-1;Parent=rna-AC57_RS00025;anticodon=(pos:248..250);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00025;product=tRNA-Arg NZ_JJLR01000221.1 RefSeq gene 349 424 . + . ID=gene-AC57_RS00020;Name=AC57_RS00020;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00020;old_locus_tag=AC57_5192 NZ_JJLR01000221.1 tRNAscan-SE tRNA 349 424 . + . ID=rna-AC57_RS00020;Parent=gene-AC57_RS00020;anticodon=(pos:382..384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00020;product=tRNA-His NZ_JJLR01000221.1 tRNAscan-SE exon 349 424 . + . ID=exon-AC57_RS00020-1;Parent=rna-AC57_RS00020;anticodon=(pos:382..384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00020;product=tRNA-His NZ_JJLR01000221.1 RefSeq gene 445 531 . + . ID=gene-AC57_RS00015;Name=AC57_RS00015;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC57_RS00015;old_locus_tag=AC57_5193 NZ_JJLR01000221.1 tRNAscan-SE tRNA 445 531 . + . ID=rna-AC57_RS00015;Parent=gene-AC57_RS00015;anticodon=(pos:479..481);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00015;product=tRNA-Leu NZ_JJLR01000221.1 tRNAscan-SE exon 445 531 . + . ID=exon-AC57_RS00015-1;Parent=rna-AC57_RS00015;anticodon=(pos:479..481);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC57_RS00015;product=tRNA-Leu ##sequence-region NZ_JJLR01000222.1 1 2175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444192 NZ_JJLR01000222.1 RefSeq region 1 2175 . + . ID=NZ_JJLR01000222.1:1..2175;Dbxref=taxon:1444192;collection-date=2009-04-09;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-392-07_S3_C3 NZ_JJLR01000222.1 RefSeq gene 110 709 . - . ID=gene-AC57_RS00010;Name=AC57_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00010;old_locus_tag=AC57_5194 NZ_JJLR01000222.1 Protein Homology CDS 110 709 . - 0 ID=cds-WP_001233066.1;Parent=gene-AC57_RS00010;Dbxref=GenBank:WP_001233066.1;Name=WP_001233066.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309676.1;locus_tag=AC57_RS00010;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_001233066.1;transl_table=11 NZ_JJLR01000222.1 RefSeq gene 780 2175 . - . ID=gene-AC57_RS00005;Name=AC57_RS00005;end_range=2175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC57_RS00005;old_locus_tag=AC57_5195;partial=true NZ_JJLR01000222.1 Protein Homology CDS 780 2175 . - 1 ID=cds-WP_032285804.1;Parent=gene-AC57_RS00005;Dbxref=GenBank:WP_032285804.1;Name=WP_032285804.1;end_range=2175,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310017.1;locus_tag=AC57_RS00005;partial=true;product=phage tail tip domain-containing protein;protein_id=WP_032285804.1;transl_table=11 ###