##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM62743v1 #!genome-build-accession NCBI_Assembly:GCF_000627435.1 #!annotation-date 06/14/2025 10:01:24 #!annotation-source NCBI RefSeq GCF_000627435.1-RS_2025_06_14 ##sequence-region NZ_JJLU01000001.1 1 1347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000001.1 RefSeq region 1 1347 . + . ID=NZ_JJLU01000001.1:1..1347;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000001.1 RefSeq pseudogene 1 224 . - . ID=gene-AC00_RS0123625;Name=AC00_RS0123625;end_range=224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123625;old_locus_tag=AC00_0001;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000001.1 Protein Homology CDS 1 224 . - 0 ID=cds-AC00_RS0123625;Parent=gene-AC00_RS0123625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=224,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS0123625;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000001.1 RefSeq gene 397 1347 . - . ID=gene-AC00_RS23620;Name=AC00_RS23620;end_range=1347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23620;old_locus_tag=AC00_0002;partial=true NZ_JJLU01000001.1 Protein Homology CDS 397 1347 . - 0 ID=cds-WP_012738266.1;Parent=gene-AC00_RS23620;Dbxref=GenBank:WP_012738266.1;Name=WP_012738266.1;Ontology_term=GO:0006313,GO:0004803;end_range=1347,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS23620;partial=true;product=IS4 family transposase;protein_id=WP_012738266.1;transl_table=11 ##sequence-region NZ_JJLU01000002.1 1 1888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000002.1 RefSeq region 1 1888 . + . ID=NZ_JJLU01000002.1:1..1888;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000002.1 RefSeq gene 1 97 . - . ID=gene-AC00_RS31085;Name=AC00_RS31085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31085;old_locus_tag=AC00_0003;partial=true;start_range=.,1 NZ_JJLU01000002.1 Protein Homology CDS 1 97 . - 0 ID=cds-WP_001425824.1;Parent=gene-AC00_RS31085;Dbxref=GenBank:WP_001425824.1;Name=WP_001425824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS31085;partial=true;product=hypothetical protein;protein_id=WP_001425824.1;start_range=.,1;transl_table=11 NZ_JJLU01000002.1 RefSeq gene 492 644 . + . ID=gene-AC00_RS23615;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AC00_RS23615;old_locus_tag=AC00_0004 NZ_JJLU01000002.1 Protein Homology CDS 492 644 . + 0 ID=cds-WP_000956465.1;Parent=gene-AC00_RS23615;Dbxref=GenBank:WP_000956465.1;Name=WP_000956465.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308648.2;locus_tag=AC00_RS23615;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956465.1;transl_table=11 NZ_JJLU01000002.1 RefSeq gene 721 1833 . + . ID=gene-AC00_RS23610;Name=AC00_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23610;old_locus_tag=AC00_0005 NZ_JJLU01000002.1 Protein Homology CDS 721 1833 . + 0 ID=cds-WP_001300563.1;Parent=gene-AC00_RS23610;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS23610;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 ##sequence-region NZ_JJLU01000003.1 1 67438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000003.1 RefSeq region 1 67438 . + . ID=NZ_JJLU01000003.1:1..67438;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000003.1 RefSeq gene 56 1168 . - . ID=gene-AC00_RS23605;Name=AC00_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23605;old_locus_tag=AC00_0006 NZ_JJLU01000003.1 Protein Homology CDS 56 1168 . - 0 ID=cds-WP_001300563.1-2;Parent=gene-AC00_RS23605;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS23605;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 1246 1398 . - . ID=gene-AC00_RS0123630;Name=mokC;gbkey=Gene;gene=mokC;gene_biotype=protein_coding;locus_tag=AC00_RS0123630 NZ_JJLU01000003.1 Protein Homology CDS 1246 1398 . - 0 ID=cds-WP_000809168.1;Parent=gene-AC00_RS0123630;Dbxref=GenBank:WP_000809168.1;Name=WP_000809168.1;gbkey=CDS;gene=mokC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025292.1;locus_tag=AC00_RS0123630;product=type I toxin-antitoxin system toxin MokC;protein_id=WP_000809168.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 1984 3150 . + . ID=gene-AC00_RS23600;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AC00_RS23600;old_locus_tag=AC00_0007 NZ_JJLU01000003.1 Protein Homology CDS 1984 3150 . + 0 ID=cds-WP_000681368.1;Parent=gene-AC00_RS23600;Dbxref=GenBank:WP_000681368.1;Name=WP_000681368.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308044.1;locus_tag=AC00_RS23600;product=Na+/H+ antiporter NhaA;protein_id=WP_000681368.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 3216 4115 . + . ID=gene-AC00_RS23595;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=AC00_RS23595;old_locus_tag=AC00_0008 NZ_JJLU01000003.1 Protein Homology CDS 3216 4115 . + 0 ID=cds-WP_001300855.1;Parent=gene-AC00_RS23595;Dbxref=GenBank:WP_001300855.1;Name=WP_001300855.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705976.2;locus_tag=AC00_RS23595;product=transcriptional activator NhaR;protein_id=WP_001300855.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 4153 5112 . - . ID=gene-AC00_RS23590;Name=AC00_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23590;old_locus_tag=AC00_0009 NZ_JJLU01000003.1 Protein Homology CDS 4153 5112 . - 0 ID=cds-WP_032222136.1;Parent=gene-AC00_RS23590;Dbxref=GenBank:WP_032222136.1;Name=WP_032222136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871680.1;locus_tag=AC00_RS23590;product=hypothetical protein;protein_id=WP_032222136.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 5125 7575 . - . ID=gene-AC00_RS23585;Name=AC00_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23585;old_locus_tag=AC00_0010 NZ_JJLU01000003.1 Protein Homology CDS 5125 7575 . - 0 ID=cds-WP_032280223.1;Parent=gene-AC00_RS23585;Dbxref=GenBank:WP_032280223.1;Name=WP_032280223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308049.1;locus_tag=AC00_RS23585;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_032280223.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 7588 8271 . - . ID=gene-AC00_RS23580;Name=AC00_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23580;old_locus_tag=AC00_0011 NZ_JJLU01000003.1 Protein Homology CDS 7588 8271 . - 0 ID=cds-WP_032280224.1;Parent=gene-AC00_RS23580;Dbxref=GenBank:WP_032280224.1;Name=WP_032280224.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308050.1;locus_tag=AC00_RS23580;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032280224.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 8321 8854 . - . ID=gene-AC00_RS23575;Name=AC00_RS23575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23575;old_locus_tag=AC00_0012 NZ_JJLU01000003.1 Protein Homology CDS 8321 8854 . - 0 ID=cds-WP_000759928.1;Parent=gene-AC00_RS23575;Dbxref=GenBank:WP_000759928.1;Name=WP_000759928.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308051.1;locus_tag=AC00_RS23575;product=fimbrial protein;protein_id=WP_000759928.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 9156 10577 . - . ID=gene-AC00_RS23570;Name=espX1;gbkey=Gene;gene=espX1;gene_biotype=protein_coding;locus_tag=AC00_RS23570;old_locus_tag=AC00_0013 NZ_JJLU01000003.1 Protein Homology CDS 9156 10577 . - 0 ID=cds-WP_032280225.1;Parent=gene-AC00_RS23570;Dbxref=GenBank:WP_032280225.1;Name=WP_032280225.1;gbkey=CDS;gene=espX1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308052.1;locus_tag=AC00_RS23570;product=type III secretion system effector EspX1;protein_id=WP_032280225.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 11061 11324 . - . ID=gene-AC00_RS0123635;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AC00_RS0123635;old_locus_tag=AC00_0014 NZ_JJLU01000003.1 Protein Homology CDS 11061 11324 . - 0 ID=cds-WP_001274021.1;Parent=gene-AC00_RS0123635;Dbxref=GenBank:WP_001274021.1;Name=WP_001274021.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=AC00_RS0123635;product=30S ribosomal protein S20;protein_id=WP_001274021.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 11427 11645 . + . ID=gene-AC00_RS0123640;Name=yaaY;gbkey=Gene;gene=yaaY;gene_biotype=protein_coding;locus_tag=AC00_RS0123640 NZ_JJLU01000003.1 Protein Homology CDS 11427 11645 . + 0 ID=cds-WP_001300728.1;Parent=gene-AC00_RS0123640;Dbxref=GenBank:WP_001300728.1;Name=WP_001300728.1;gbkey=CDS;gene=yaaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414565.1;locus_tag=AC00_RS0123640;product=DUF2575 family protein;protein_id=WP_001300728.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 11653 12594 . + . ID=gene-AC00_RS23565;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AC00_RS23565;old_locus_tag=AC00_0015 NZ_JJLU01000003.1 Protein Homology CDS 11653 12594 . + 0 ID=cds-WP_000767329.1;Parent=gene-AC00_RS23565;Dbxref=GenBank:WP_000767329.1;Name=WP_000767329.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308055.1;locus_tag=AC00_RS23565;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_000767329.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 12637 15453 . + . ID=gene-AC00_RS23560;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AC00_RS23560;old_locus_tag=AC00_0016 NZ_JJLU01000003.1 Protein Homology CDS 12637 15453 . + 0 ID=cds-WP_032280226.1;Parent=gene-AC00_RS23560;Dbxref=GenBank:WP_032280226.1;Name=WP_032280226.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=AC00_RS23560;product=isoleucine--tRNA ligase;protein_id=WP_032280226.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 15453 15947 . + . ID=gene-AC00_RS23555;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AC00_RS23555;old_locus_tag=AC00_0017 NZ_JJLU01000003.1 Protein Homology CDS 15453 15947 . + 0 ID=cds-WP_000083369.1;Parent=gene-AC00_RS23555;Dbxref=GenBank:WP_000083369.1;Name=WP_000083369.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414568.1;locus_tag=AC00_RS23555;product=signal peptidase II;protein_id=WP_000083369.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 16035 16484 . + . ID=gene-AC00_RS23550;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=AC00_RS23550;old_locus_tag=AC00_0018 NZ_JJLU01000003.1 Protein Homology CDS 16035 16484 . + 0 ID=cds-WP_000004655.1;Parent=gene-AC00_RS23550;Dbxref=GenBank:WP_000004655.1;Name=WP_000004655.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308058.1;locus_tag=AC00_RS23550;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000004655.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 16486 17436 . + . ID=gene-AC00_RS23545;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AC00_RS23545;old_locus_tag=AC00_0019 NZ_JJLU01000003.1 Protein Homology CDS 16486 17436 . + 0 ID=cds-WP_001166395.1;Parent=gene-AC00_RS23545;Dbxref=GenBank:WP_001166395.1;Name=WP_001166395.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=AC00_RS23545;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_001166395.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 17502 18416 . + . ID=gene-AC00_RS23540;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=AC00_RS23540;old_locus_tag=AC00_0020 NZ_JJLU01000003.1 Protein Homology CDS 17502 18416 . + 0 ID=cds-WP_001239137.1;Parent=gene-AC00_RS23540;Dbxref=GenBank:WP_001239137.1;Name=WP_001239137.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705986.1;locus_tag=AC00_RS23540;product=ribonucleoside hydrolase RihC;protein_id=WP_001239137.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 18583 19404 . + . ID=gene-AC00_RS23535;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=AC00_RS23535;old_locus_tag=AC00_0021 NZ_JJLU01000003.1 Protein Homology CDS 18583 19404 . + 0 ID=cds-WP_032286856.1;Parent=gene-AC00_RS23535;Dbxref=GenBank:WP_032286856.1;Name=WP_032286856.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414572.1;locus_tag=AC00_RS23535;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_032286856.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 19860 21008 . + . ID=gene-AC00_RS23530;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AC00_RS23530;old_locus_tag=AC00_0023 NZ_JJLU01000003.1 Protein Homology CDS 19860 21008 . + 0 ID=cds-WP_000597260.1;Parent=gene-AC00_RS23530;Dbxref=GenBank:WP_000597260.1;Name=WP_000597260.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=AC00_RS23530;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_000597260.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 21026 24247 . + . ID=gene-AC00_RS23525;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AC00_RS23525;old_locus_tag=AC00_0024 NZ_JJLU01000003.1 Protein Homology CDS 21026 24247 . + 0 ID=cds-WP_001126371.1;Parent=gene-AC00_RS23525;Dbxref=GenBank:WP_001126371.1;Name=WP_001126371.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308063.1;locus_tag=AC00_RS23525;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_001126371.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 24508 24903 . + . ID=gene-AC00_RS23515;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=AC00_RS23515;old_locus_tag=AC00_0026 NZ_JJLU01000003.1 Protein Homology CDS 24508 24903 . + 0 ID=cds-WP_000333125.1;Parent=gene-AC00_RS23515;Dbxref=GenBank:WP_000333125.1;Name=WP_000333125.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414576.4;locus_tag=AC00_RS23515;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_000333125.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 24989 25579 . - . ID=gene-AC00_RS23510;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=AC00_RS23510;old_locus_tag=AC00_0027 NZ_JJLU01000003.1 Protein Homology CDS 24989 25579 . - 0 ID=cds-WP_021574449.1;Parent=gene-AC00_RS23510;Dbxref=GenBank:WP_021574449.1;Name=WP_021574449.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308065.2;locus_tag=AC00_RS23510;product=carnitine operon protein CaiE;protein_id=WP_021574449.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 25585 26370 . - . ID=gene-AC00_RS23505;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=AC00_RS23505;old_locus_tag=AC00_0028 NZ_JJLU01000003.1 Protein Homology CDS 25585 26370 . - 0 ID=cds-WP_001295419.1;Parent=gene-AC00_RS23505;Dbxref=GenBank:WP_001295419.1;Name=WP_001295419.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=AC00_RS23505;product=crotonobetainyl-CoA hydratase;protein_id=WP_001295419.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 26479 28032 . - . ID=gene-AC00_RS23500;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=AC00_RS23500;old_locus_tag=AC00_0029 NZ_JJLU01000003.1 Protein Homology CDS 26479 28032 . - 0 ID=cds-WP_032280228.1;Parent=gene-AC00_RS23500;Dbxref=GenBank:WP_032280228.1;Name=WP_032280228.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308067.2;locus_tag=AC00_RS23500;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_032280228.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 28106 29323 . - . ID=gene-AC00_RS23495;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=AC00_RS23495;old_locus_tag=AC00_0030 NZ_JJLU01000003.1 Protein Homology CDS 28106 29323 . - 0 ID=cds-WP_000349922.1;Parent=gene-AC00_RS23495;Dbxref=GenBank:WP_000349922.1;Name=WP_000349922.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308068.1;locus_tag=AC00_RS23495;product=L-carnitine CoA-transferase;protein_id=WP_000349922.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 29452 30594 . - . ID=gene-AC00_RS23490;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=AC00_RS23490;old_locus_tag=AC00_0031 NZ_JJLU01000003.1 Protein Homology CDS 29452 30594 . - 0 ID=cds-WP_000347117.1;Parent=gene-AC00_RS23490;Dbxref=GenBank:WP_000347117.1;Name=WP_000347117.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=AC00_RS23490;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_000347117.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 30625 32139 . - . ID=gene-AC00_RS23485;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=AC00_RS23485;old_locus_tag=AC00_0032 NZ_JJLU01000003.1 Protein Homology CDS 30625 32139 . - 0 ID=cds-WP_032280230.1;Parent=gene-AC00_RS23485;Dbxref=GenBank:WP_032280230.1;Name=WP_032280230.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308070.1;locus_tag=AC00_RS23485;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_032280230.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 32613 33383 . + . ID=gene-AC00_RS23480;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=AC00_RS23480;old_locus_tag=AC00_0033 NZ_JJLU01000003.1 Protein Homology CDS 32613 33383 . + 0 ID=cds-WP_000692204.1;Parent=gene-AC00_RS23480;Dbxref=GenBank:WP_000692204.1;Name=WP_000692204.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414583.2;locus_tag=AC00_RS23480;product=electron transfer flavoprotein FixA;protein_id=WP_000692204.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 33398 34339 . + . ID=gene-AC00_RS23475;Name=fixB;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=AC00_RS23475;old_locus_tag=AC00_0034 NZ_JJLU01000003.1 Protein Homology CDS 33398 34339 . + 0 ID=cds-WP_032280231.1;Parent=gene-AC00_RS23475;Dbxref=GenBank:WP_032280231.1;Name=WP_032280231.1;gbkey=CDS;gene=fixB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308072.1;locus_tag=AC00_RS23475;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_032280231.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 34390 35676 . + . ID=gene-AC00_RS23470;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=AC00_RS23470;old_locus_tag=AC00_0035 NZ_JJLU01000003.1 Protein Homology CDS 34390 35676 . + 0 ID=cds-WP_032288134.1;Parent=gene-AC00_RS23470;Dbxref=GenBank:WP_032288134.1;Name=WP_032288134.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308073.1;locus_tag=AC00_RS23470;product=FAD-dependent oxidoreductase;protein_id=WP_032288134.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 35673 35960 . + . ID=gene-AC00_RS23465;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=AC00_RS23465;old_locus_tag=AC00_0036 NZ_JJLU01000003.1 Protein Homology CDS 35673 35960 . + 0 ID=cds-WP_000203741.1;Parent=gene-AC00_RS23465;Dbxref=GenBank:WP_000203741.1;Name=WP_000203741.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308074.1;locus_tag=AC00_RS23465;product=ferredoxin-like protein FixX;protein_id=WP_000203741.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 36018 37349 . + . ID=gene-AC00_RS23460;Name=yaaU;gbkey=Gene;gene=yaaU;gene_biotype=protein_coding;locus_tag=AC00_RS23460;old_locus_tag=AC00_0037 NZ_JJLU01000003.1 Protein Homology CDS 36018 37349 . + 0 ID=cds-WP_032280232.1;Parent=gene-AC00_RS23460;Dbxref=GenBank:WP_032280232.1;Name=WP_032280232.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yaaU;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414587.1;locus_tag=AC00_RS23460;product=MFS transporter;protein_id=WP_032280232.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 37460 37990 . + . ID=gene-AC00_RS23455;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=AC00_RS23455;old_locus_tag=AC00_0038 NZ_JJLU01000003.1 Protein Homology CDS 37460 37990 . + 0 ID=cds-WP_000600737.1;Parent=gene-AC00_RS23455;Dbxref=GenBank:WP_000600737.1;Name=WP_000600737.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706002.1;locus_tag=AC00_RS23455;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_000600737.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 37983 39845 . + . ID=gene-AC00_RS23450;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=AC00_RS23450;old_locus_tag=AC00_0039 NZ_JJLU01000003.1 Protein Homology CDS 37983 39845 . + 0 ID=cds-WP_000377186.1;Parent=gene-AC00_RS23450;Dbxref=GenBank:WP_000377186.1;Name=WP_000377186.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706003.1;locus_tag=AC00_RS23450;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_000377186.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 40037 40516 . + . ID=gene-AC00_RS23445;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AC00_RS23445;old_locus_tag=AC00_0040 NZ_JJLU01000003.1 Protein Homology CDS 40037 40516 . + 0 ID=cds-WP_000624375.1;Parent=gene-AC00_RS23445;Dbxref=GenBank:WP_000624375.1;Name=WP_000624375.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=AC00_RS23445;product=type 3 dihydrofolate reductase;protein_id=WP_000624375.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 40602 40835 . + . ID=gene-AC00_RS23440;Name=AC00_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23440;old_locus_tag=AC00_0041 NZ_JJLU01000003.1 Protein Homology CDS 40602 40835 . + 0 ID=cds-WP_000125566.1;Parent=gene-AC00_RS23440;Dbxref=GenBank:WP_000125566.1;Name=WP_000125566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308079.1;locus_tag=AC00_RS23440;product=type II toxin-antitoxin system CcdA family antitoxin;protein_id=WP_000125566.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 40838 41152 . + . ID=gene-AC00_RS23435;Name=AC00_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23435;old_locus_tag=AC00_0042 NZ_JJLU01000003.1 Protein Homology CDS 40838 41152 . + 0 ID=cds-WP_032280233.1;Parent=gene-AC00_RS23435;Dbxref=GenBank:WP_032280233.1;Name=WP_032280233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308080.1;locus_tag=AC00_RS23435;product=CcdB family protein;protein_id=WP_032280233.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 41149 41997 . - . ID=gene-AC00_RS23430;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AC00_RS23430;old_locus_tag=AC00_0043 NZ_JJLU01000003.1 Protein Homology CDS 41149 41997 . - 0 ID=cds-WP_000257188.1;Parent=gene-AC00_RS23430;Dbxref=GenBank:WP_000257188.1;Name=WP_000257188.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308081.1;locus_tag=AC00_RS23430;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_000257188.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 42004 42381 . - . ID=gene-AC00_RS23425;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=AC00_RS23425;old_locus_tag=AC00_0044 NZ_JJLU01000003.1 Protein Homology CDS 42004 42381 . - 0 ID=cds-WP_000610901.1;Parent=gene-AC00_RS23425;Dbxref=GenBank:WP_000610901.1;Name=WP_000610901.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308082.1;locus_tag=AC00_RS23425;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_000610901.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 42384 43205 . - . ID=gene-AC00_RS23420;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AC00_RS23420;old_locus_tag=AC00_0045 NZ_JJLU01000003.1 Protein Homology CDS 42384 43205 . - 0 ID=cds-WP_001065381.1;Parent=gene-AC00_RS23420;Dbxref=GenBank:WP_001065381.1;Name=WP_001065381.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414593.1;locus_tag=AC00_RS23420;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001065381.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 43202 44191 . - . ID=gene-AC00_RS23415;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=AC00_RS23415;old_locus_tag=AC00_0046 NZ_JJLU01000003.1 Protein Homology CDS 43202 44191 . - 0 ID=cds-WP_032280236.1;Parent=gene-AC00_RS23415;Dbxref=GenBank:WP_032280236.1;Name=WP_032280236.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414594.1;locus_tag=AC00_RS23415;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_032280236.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 44191 45477 . - . ID=gene-AC00_RS23410;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=AC00_RS23410;old_locus_tag=AC00_0047 NZ_JJLU01000003.1 Protein Homology CDS 44191 45477 . - 0 ID=cds-WP_000800457.1;Parent=gene-AC00_RS23410;Dbxref=GenBank:WP_000800457.1;Name=WP_000800457.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=AC00_RS23410;product=peptidylprolyl isomerase SurA;protein_id=WP_000800457.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 45530 47899 . - . ID=gene-AC00_RS23405;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=AC00_RS23405;old_locus_tag=AC00_0048 NZ_JJLU01000003.1 Protein Homology CDS 45530 47899 . - 0 ID=cds-WP_021556399.1;Parent=gene-AC00_RS23405;Dbxref=GenBank:WP_021556399.1;Name=WP_021556399.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=AC00_RS23405;product=LPS assembly protein LptD;protein_id=WP_021556399.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 48154 48969 . + . ID=gene-AC00_RS23400;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=AC00_RS23400;old_locus_tag=AC00_0049 NZ_JJLU01000003.1 Protein Homology CDS 48154 48969 . + 0 ID=cds-WP_001200573.1;Parent=gene-AC00_RS23400;Dbxref=GenBank:WP_001200573.1;Name=WP_001200573.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308087.1;locus_tag=AC00_RS23400;product=co-chaperone DjlA;protein_id=WP_001200573.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 49264 49944 . + . ID=gene-AC00_RS23395;Name=espY1;gbkey=Gene;gene=espY1;gene_biotype=protein_coding;locus_tag=AC00_RS23395;old_locus_tag=AC00_0050 NZ_JJLU01000003.1 Protein Homology CDS 49264 49944 . + 0 ID=cds-WP_050438620.1;Parent=gene-AC00_RS23395;Dbxref=GenBank:WP_050438620.1;Name=WP_050438620.1;gbkey=CDS;gene=espY1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308088.1;locus_tag=AC00_RS23395;product=T3SS effector EspY1;protein_id=WP_050438620.1;transl_table=11 NZ_JJLU01000003.1 RefSeq pseudogene 50018 50147 . - . ID=gene-AC00_RS30150;Name=AC00_RS30150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30150;partial=true;pseudo=true;start_range=.,50018 NZ_JJLU01000003.1 Protein Homology CDS 50018 50147 . - 0 ID=cds-AC00_RS30150;Parent=gene-AC00_RS30150;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000244358.1;locus_tag=AC00_RS30150;partial=true;product=transposase DNA-binding-containing protein;pseudo=true;start_range=.,50018;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 50360 51019 . - . ID=gene-AC00_RS23390;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=AC00_RS23390;old_locus_tag=AC00_0051 NZ_JJLU01000003.1 Protein Homology CDS 50360 51019 . - 0 ID=cds-WP_000525176.1;Parent=gene-AC00_RS23390;Dbxref=GenBank:WP_000525176.1;Name=WP_000525176.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414600.1;locus_tag=AC00_RS23390;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_000525176.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 51031 53937 . - . ID=gene-AC00_RS23385;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=AC00_RS23385;old_locus_tag=AC00_0052 NZ_JJLU01000003.1 Protein Homology CDS 51031 53937 . - 0 ID=cds-WP_032280240.1;Parent=gene-AC00_RS23385;Dbxref=GenBank:WP_032280240.1;Name=WP_032280240.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=AC00_RS23385;product=RNA polymerase-associated protein RapA;protein_id=WP_032280240.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 54101 56452 . - . ID=gene-AC00_RS23380;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=AC00_RS23380;old_locus_tag=AC00_0053 NZ_JJLU01000003.1 Protein Homology CDS 54101 56452 . - 0 ID=cds-WP_032288135.1;Parent=gene-AC00_RS23380;Dbxref=GenBank:WP_032288135.1;Name=WP_032288135.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308091.1;locus_tag=AC00_RS23380;product=DNA polymerase II;protein_id=WP_032288135.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 56527 57222 . - . ID=gene-AC00_RS23375;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AC00_RS23375;old_locus_tag=AC00_0054 NZ_JJLU01000003.1 Protein Homology CDS 56527 57222 . - 0 ID=cds-WP_000888654.1;Parent=gene-AC00_RS23375;Dbxref=GenBank:WP_000888654.1;Name=WP_000888654.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308092.1;locus_tag=AC00_RS23375;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888654.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 57391 58893 . - . ID=gene-AC00_RS23370;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=AC00_RS23370;old_locus_tag=AC00_0055 NZ_JJLU01000003.1 Protein Homology CDS 57391 58893 . - 0 ID=cds-WP_000151726.1;Parent=gene-AC00_RS23370;Dbxref=GenBank:WP_000151726.1;Name=WP_000151726.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308093.1;locus_tag=AC00_RS23370;product=L-arabinose isomerase;protein_id=WP_000151726.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 58904 60604 . - . ID=gene-AC00_RS23365;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=AC00_RS23365;old_locus_tag=AC00_0056 NZ_JJLU01000003.1 Protein Homology CDS 58904 60604 . - 0 ID=cds-WP_032280242.1;Parent=gene-AC00_RS23365;Dbxref=GenBank:WP_032280242.1;Name=WP_032280242.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308094.1;locus_tag=AC00_RS23365;product=ribulokinase;protein_id=WP_032280242.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 60943 61821 . + . ID=gene-AC00_RS23360;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=AC00_RS23360;old_locus_tag=AC00_0058 NZ_JJLU01000003.1 Protein Homology CDS 60943 61821 . + 0 ID=cds-WP_001300811.1;Parent=gene-AC00_RS23360;Dbxref=GenBank:WP_001300811.1;Name=WP_001300811.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308095.1;locus_tag=AC00_RS23360;product=arabinose operon transcriptional regulator AraC;protein_id=WP_001300811.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 61907 62671 . + . ID=gene-AC00_RS23355;Name=yabI;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=AC00_RS23355;old_locus_tag=AC00_0059 NZ_JJLU01000003.1 Protein Homology CDS 61907 62671 . + 0 ID=cds-WP_032280243.1;Parent=gene-AC00_RS23355;Dbxref=GenBank:WP_032280243.1;Name=WP_032280243.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yabI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706018.1;locus_tag=AC00_RS23355;product=DedA family protein;protein_id=WP_032280243.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 62758 63456 . - . ID=gene-AC00_RS23350;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AC00_RS23350;old_locus_tag=AC00_0060 NZ_JJLU01000003.1 Protein Homology CDS 62758 63456 . - 0 ID=cds-WP_032280244.1;Parent=gene-AC00_RS23350;Dbxref=GenBank:WP_032280244.1;Name=WP_032280244.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414608.1;locus_tag=AC00_RS23350;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_032280244.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 63440 65050 . - . ID=gene-AC00_RS23345;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=AC00_RS23345;old_locus_tag=AC00_0061 NZ_JJLU01000003.1 Protein Homology CDS 63440 65050 . - 0 ID=cds-WP_032280245.1;Parent=gene-AC00_RS23345;Dbxref=GenBank:WP_032280245.1;Name=WP_032280245.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308098.1;locus_tag=AC00_RS23345;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_032280245.1;transl_table=11 NZ_JJLU01000003.1 RefSeq gene 65026 66009 . - . ID=gene-AC00_RS23340;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=AC00_RS23340;old_locus_tag=AC00_0062 NZ_JJLU01000003.1 Protein Homology CDS 65026 66009 . - 0 ID=cds-WP_001301364.1;Parent=gene-AC00_RS23340;Dbxref=GenBank:WP_001301364.1;Name=WP_001301364.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414610.1;locus_tag=AC00_RS23340;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_001301364.1;transl_table=11 NZ_JJLU01000003.1 cmsearch riboswitch 66040 66139 . - . ID=id-NZ_JJLU01000003.1:66040..66139;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLU01000003.1 RefSeq gene 66381 66950 . + . ID=gene-AC00_RS23335;Name=espY2;gbkey=Gene;gene=espY2;gene_biotype=protein_coding;locus_tag=AC00_RS23335;old_locus_tag=AC00_0063 NZ_JJLU01000003.1 Protein Homology CDS 66381 66950 . + 0 ID=cds-WP_021556407.1;Parent=gene-AC00_RS23335;Dbxref=GenBank:WP_021556407.1;Name=WP_021556407.1;gbkey=CDS;gene=espY2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308100.1;locus_tag=AC00_RS23335;product=T3SS effector EspY2;protein_id=WP_021556407.1;transl_table=11 NZ_JJLU01000003.1 RefSeq pseudogene 67120 67438 . - . ID=gene-AC00_RS23330;Name=AC00_RS23330;end_range=67438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS23330;old_locus_tag=AC00_0064;partial=true;pseudo=true NZ_JJLU01000003.1 Protein Homology CDS 67120 67438 . - 1 ID=cds-AC00_RS23330;Parent=gene-AC00_RS23330;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=67438,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS23330;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000004.1 1 24725 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000004.1 RefSeq region 1 24725 . + . ID=NZ_JJLU01000004.1:1..24725;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000004.1 RefSeq gene 1 219 . - . ID=gene-AC00_RS0123655;Name=AC00_RS0123655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123655;old_locus_tag=AC00_0065;partial=true;start_range=.,1 NZ_JJLU01000004.1 Protein Homology CDS 1 219 . - 0 ID=cds-WP_001397283.1;Parent=gene-AC00_RS0123655;Dbxref=GenBank:WP_001397283.1;Name=WP_001397283.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123655;partial=true;product=IS1 family transposase;protein_id=WP_001397283.1;start_range=.,1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 359 2017 . - . ID=gene-AC00_RS23325;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=AC00_RS23325;old_locus_tag=AC00_0066 NZ_JJLU01000004.1 Protein Homology CDS 359 2017 . - 0 ID=cds-WP_032280246.1;Parent=gene-AC00_RS23325;Dbxref=GenBank:WP_032280246.1;Name=WP_032280246.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308101.1;locus_tag=AC00_RS23325;product=DNA-binding transcriptional regulator SgrR;protein_id=WP_032280246.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 2106 2237 . + . ID=gene-AC00_RS23320;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=AC00_RS23320;old_locus_tag=AC00_0067 NZ_JJLU01000004.1 Protein Homology CDS 2106 2237 . + 0 ID=cds-WP_001248768.1;Parent=gene-AC00_RS23320;Dbxref=GenBank:WP_001248768.1;Name=WP_001248768.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248776.1;locus_tag=AC00_RS23320;product=glucose uptake inhibitor SgrT;protein_id=WP_001248768.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 2345 2950 . - . ID=gene-AC00_RS23315;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AC00_RS23315;old_locus_tag=AC00_0068 NZ_JJLU01000004.1 Protein Homology CDS 2345 2950 . - 0 ID=cds-WP_032280247.1;Parent=gene-AC00_RS23315;Dbxref=GenBank:WP_032280247.1;Name=WP_032280247.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308102.1;locus_tag=AC00_RS23315;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_032280247.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 2961 4361 . - . ID=gene-AC00_RS23310;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=AC00_RS23310;old_locus_tag=AC00_0069 NZ_JJLU01000004.1 Protein Homology CDS 2961 4361 . - 0 ID=cds-WP_001140652.1;Parent=gene-AC00_RS23310;Dbxref=GenBank:WP_001140652.1;Name=WP_001140652.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=AC00_RS23310;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001140652.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 4364 5455 . - . ID=gene-AC00_RS23305;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=AC00_RS23305;old_locus_tag=AC00_0070 NZ_JJLU01000004.1 Protein Homology CDS 4364 5455 . - 0 ID=cds-WP_000042351.1;Parent=gene-AC00_RS23305;Dbxref=GenBank:WP_000042351.1;Name=WP_000042351.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=AC00_RS23305;product=3-isopropylmalate dehydrogenase;protein_id=WP_000042351.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 5455 7026 . - . ID=gene-AC00_RS23300;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=AC00_RS23300;old_locus_tag=AC00_0071 NZ_JJLU01000004.1 Protein Homology CDS 5455 7026 . - 0 ID=cds-WP_000082846.1;Parent=gene-AC00_RS23300;Dbxref=GenBank:WP_000082846.1;Name=WP_000082846.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=AC00_RS23300;product=2-isopropylmalate synthase;protein_id=WP_000082846.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 7119 7205 . - . ID=gene-AC00_RS0123660;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=AC00_RS0123660 NZ_JJLU01000004.1 Protein Homology CDS 7119 7205 . - 0 ID=cds-WP_001300467.1;Parent=gene-AC00_RS0123660;Dbxref=GenBank:WP_001300467.1;Name=WP_001300467.1;gbkey=CDS;gene=leuL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308106.1;locus_tag=AC00_RS0123660;product=leu operon leader peptide;protein_id=WP_001300467.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 7863 8807 . + . ID=gene-AC00_RS23295;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=AC00_RS23295;old_locus_tag=AC00_0072 NZ_JJLU01000004.1 Protein Homology CDS 7863 8807 . + 0 ID=cds-WP_001115472.1;Parent=gene-AC00_RS23295;Dbxref=GenBank:WP_001115472.1;Name=WP_001115472.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414618.4;locus_tag=AC00_RS23295;product=transcriptional regulator LeuO;protein_id=WP_001115472.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 8962 9006 . - . ID=gene-AC00_RS30825;Name=AC00_RS30825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30825 NZ_JJLU01000004.1 Protein Homology CDS 8962 9006 . - 0 ID=cds-WP_128566915.1;Parent=gene-AC00_RS30825;Dbxref=GenBank:WP_128566915.1;Name=WP_128566915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518736.1;locus_tag=AC00_RS30825;product=hypothetical protein;protein_id=WP_128566915.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 9125 10849 . + . ID=gene-AC00_RS23290;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=AC00_RS23290;old_locus_tag=AC00_0073 NZ_JJLU01000004.1 Protein Homology CDS 9125 10849 . + 0 ID=cds-WP_032280248.1;Parent=gene-AC00_RS23290;Dbxref=GenBank:WP_032280248.1;Name=WP_032280248.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=AC00_RS23290;product=acetolactate synthase 3 large subunit;protein_id=WP_032280248.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 10852 11343 . + . ID=gene-AC00_RS23285;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AC00_RS23285;old_locus_tag=AC00_0074 NZ_JJLU01000004.1 Protein Homology CDS 10852 11343 . + 0 ID=cds-WP_001252744.1;Parent=gene-AC00_RS23285;Dbxref=GenBank:WP_001252744.1;Name=WP_001252744.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=AC00_RS23285;product=acetolactate synthase small subunit;protein_id=WP_001252744.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 11355 11441 . + . ID=gene-AC00_RS0123665;Name=AC00_RS0123665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123665 NZ_JJLU01000004.1 Protein Homology CDS 11355 11441 . + 0 ID=cds-WP_001303787.1;Parent=gene-AC00_RS0123665;Dbxref=GenBank:WP_001303787.1;Name=WP_001303787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308110.1;locus_tag=AC00_RS0123665;product=fruR/shl operon leader peptide;protein_id=WP_001303787.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 11523 12527 . + . ID=gene-AC00_RS23280;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=AC00_RS23280;old_locus_tag=AC00_0076 NZ_JJLU01000004.1 Protein Homology CDS 11523 12527 . + 0 ID=cds-WP_000762401.1;Parent=gene-AC00_RS23280;Dbxref=GenBank:WP_000762401.1;Name=WP_000762401.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308111.1;locus_tag=AC00_RS23280;product=catabolite repressor/activator;protein_id=WP_000762401.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 13129 13587 . + . ID=gene-AC00_RS23275;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=AC00_RS23275;old_locus_tag=AC00_0077 NZ_JJLU01000004.1 Protein Homology CDS 13129 13587 . + 0 ID=cds-WP_001295770.1;Parent=gene-AC00_RS23275;Dbxref=GenBank:WP_001295770.1;Name=WP_001295770.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=AC00_RS23275;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001295770.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 13589 14530 . + . ID=gene-AC00_RS23270;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AC00_RS23270;old_locus_tag=AC00_0078 NZ_JJLU01000004.1 Protein Homology CDS 13589 14530 . + 0 ID=cds-WP_000970479.1;Parent=gene-AC00_RS23270;Dbxref=GenBank:WP_000970479.1;Name=WP_000970479.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=AC00_RS23270;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_000970479.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 14527 14892 . + . ID=gene-AC00_RS23265;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=AC00_RS23265;old_locus_tag=AC00_0079 NZ_JJLU01000004.1 Protein Homology CDS 14527 14892 . + 0 ID=cds-WP_000625658.1;Parent=gene-AC00_RS23265;Dbxref=GenBank:WP_000625658.1;Name=WP_000625658.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=AC00_RS23265;product=cell division protein FtsL;protein_id=WP_000625658.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 14908 16674 . + . ID=gene-AC00_RS23260;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=AC00_RS23260;old_locus_tag=AC00_0080 NZ_JJLU01000004.1 Protein Homology CDS 14908 16674 . + 0 ID=cds-WP_000642196.1;Parent=gene-AC00_RS23260;Dbxref=GenBank:WP_000642196.1;Name=WP_000642196.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=AC00_RS23260;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_000642196.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 16661 18148 . + . ID=gene-AC00_RS23255;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AC00_RS23255;old_locus_tag=AC00_0081 NZ_JJLU01000004.1 Protein Homology CDS 16661 18148 . + 0 ID=cds-WP_032280249.1;Parent=gene-AC00_RS23255;Dbxref=GenBank:WP_032280249.1;Name=WP_032280249.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308116.1;locus_tag=AC00_RS23255;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_032280249.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 18145 19503 . + . ID=gene-AC00_RS23250;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AC00_RS23250;old_locus_tag=AC00_0082 NZ_JJLU01000004.1 Protein Homology CDS 18145 19503 . + 0 ID=cds-WP_032280250.1;Parent=gene-AC00_RS23250;Dbxref=GenBank:WP_032280250.1;Name=WP_032280250.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308117.1;locus_tag=AC00_RS23250;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_032280250.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 19497 20579 . + . ID=gene-AC00_RS23245;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AC00_RS23245;old_locus_tag=AC00_0083 NZ_JJLU01000004.1 Protein Homology CDS 19497 20579 . + 0 ID=cds-WP_000964134.1;Parent=gene-AC00_RS23245;Dbxref=GenBank:WP_000964134.1;Name=WP_000964134.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=AC00_RS23245;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_000964134.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 20582 21898 . + . ID=gene-AC00_RS23240;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AC00_RS23240;old_locus_tag=AC00_0084 NZ_JJLU01000004.1 Protein Homology CDS 20582 21898 . + 0 ID=cds-WP_000796483.1;Parent=gene-AC00_RS23240;Dbxref=GenBank:WP_000796483.1;Name=WP_000796483.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=AC00_RS23240;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_000796483.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 21898 23142 . + . ID=gene-AC00_RS23235;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AC00_RS23235;old_locus_tag=AC00_0085 NZ_JJLU01000004.1 Protein Homology CDS 21898 23142 . + 0 ID=cds-WP_032280251.1;Parent=gene-AC00_RS23235;Dbxref=GenBank:WP_032280251.1;Name=WP_032280251.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308120.1;locus_tag=AC00_RS23235;product=cell division protein FtsW;protein_id=WP_032280251.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 23139 24206 . + . ID=gene-AC00_RS23230;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AC00_RS23230;old_locus_tag=AC00_0086 NZ_JJLU01000004.1 Protein Homology CDS 23139 24206 . + 0 ID=cds-WP_000016559.1;Parent=gene-AC00_RS23230;Dbxref=GenBank:WP_000016559.1;Name=WP_000016559.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308121.1;locus_tag=AC00_RS23230;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016559.1;transl_table=11 NZ_JJLU01000004.1 RefSeq gene 24260 24725 . + . ID=gene-AC00_RS23225;Name=AC00_RS23225;end_range=24725,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23225;old_locus_tag=AC00_0087;partial=true NZ_JJLU01000004.1 Protein Homology CDS 24260 24725 . + 0 ID=cds-WP_032288136.1;Parent=gene-AC00_RS23225;Dbxref=GenBank:WP_032288136.1;Name=WP_032288136.1;Ontology_term=GO:0009058,GO:0016881;end_range=24725,.;gbkey=CDS;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308122.1;locus_tag=AC00_RS23225;partial=true;product=Mur ligase domain-containing protein;protein_id=WP_032288136.1;transl_table=11 ##sequence-region NZ_JJLU01000005.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000005.1 RefSeq region 1 2047 . + . ID=NZ_JJLU01000005.1:1..2047;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000005.1 RefSeq gene 1 1014 . + . ID=gene-AC00_RS23220;Name=AC00_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS23220;old_locus_tag=AC00_0088;partial=true;start_range=.,1 NZ_JJLU01000005.1 Protein Homology CDS 1 1014 . + 0 ID=cds-WP_032288137.1;Parent=gene-AC00_RS23220;Dbxref=GenBank:WP_032288137.1;Name=WP_032288137.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AC00_RS23220;partial=true;product=SEC-C metal-binding domain-containing protein;protein_id=WP_032288137.1;start_range=.,1;transl_table=11 NZ_JJLU01000005.1 RefSeq gene 1074 1463 . + . ID=gene-AC00_RS23215;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AC00_RS23215;old_locus_tag=AC00_0089 NZ_JJLU01000005.1 Protein Homology CDS 1074 1463 . + 0 ID=cds-WP_000736046.1;Parent=gene-AC00_RS23215;Dbxref=GenBank:WP_000736046.1;Name=WP_000736046.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AC00_RS23215;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736046.1;transl_table=11 NZ_JJLU01000005.1 RefSeq gene 1795 1992 . - . ID=gene-AC00_RS23210;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AC00_RS23210;old_locus_tag=AC00_0090 NZ_JJLU01000005.1 Protein Homology CDS 1795 1992 . - 0 ID=cds-WP_000005042.1;Parent=gene-AC00_RS23210;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AC00_RS23210;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 ##sequence-region NZ_JJLU01000006.1 1 51730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000006.1 RefSeq region 1 51730 . + . ID=NZ_JJLU01000006.1:1..51730;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000006.1 RefSeq gene 54 1121 . + . ID=gene-AC00_RS23205;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AC00_RS23205;old_locus_tag=AC00_0091 NZ_JJLU01000006.1 Protein Homology CDS 54 1121 . + 0 ID=cds-WP_000016559.1-2;Parent=gene-AC00_RS23205;Dbxref=GenBank:WP_000016559.1;Name=WP_000016559.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308121.1;locus_tag=AC00_RS23205;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_000016559.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 1175 2650 . + . ID=gene-AC00_RS23200;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AC00_RS23200;old_locus_tag=AC00_0092 NZ_JJLU01000006.1 Protein Homology CDS 1175 2650 . + 0 ID=cds-WP_001096044.1;Parent=gene-AC00_RS23200;Dbxref=GenBank:WP_001096044.1;Name=WP_001096044.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308122.1;locus_tag=AC00_RS23200;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001096044.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 2643 3563 . + . ID=gene-AC00_RS23195;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;locus_tag=AC00_RS23195;old_locus_tag=AC00_0093 NZ_JJLU01000006.1 Protein Homology CDS 2643 3563 . + 0 ID=cds-WP_000130056.1;Parent=gene-AC00_RS23195;Dbxref=GenBank:WP_000130056.1;Name=WP_000130056.1;gbkey=CDS;gene=ddlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414634.1;locus_tag=AC00_RS23195;product=D-alanine--D-alanine ligase;protein_id=WP_000130056.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 3565 4395 . + . ID=gene-AC00_RS23190;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=AC00_RS23190;old_locus_tag=AC00_0094 NZ_JJLU01000006.1 Protein Homology CDS 3565 4395 . + 0 ID=cds-WP_000075744.1;Parent=gene-AC00_RS23190;Dbxref=GenBank:WP_000075744.1;Name=WP_000075744.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308124.1;locus_tag=AC00_RS23190;product=cell division protein FtsQ;protein_id=WP_000075744.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 4392 5654 . + . ID=gene-AC00_RS23185;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AC00_RS23185;old_locus_tag=AC00_0095 NZ_JJLU01000006.1 Protein Homology CDS 4392 5654 . + 0 ID=cds-WP_001425111.1;Parent=gene-AC00_RS23185;Dbxref=GenBank:WP_001425111.1;Name=WP_001425111.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308125.1;locus_tag=AC00_RS23185;product=cell division protein FtsA;protein_id=WP_001425111.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 5715 6866 . + . ID=gene-AC00_RS23180;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AC00_RS23180;old_locus_tag=AC00_0096 NZ_JJLU01000006.1 Protein Homology CDS 5715 6866 . + 0 ID=cds-WP_000462775.1;Parent=gene-AC00_RS23180;Dbxref=GenBank:WP_000462775.1;Name=WP_000462775.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=AC00_RS23180;product=cell division protein FtsZ;protein_id=WP_000462775.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 6967 7884 . + . ID=gene-AC00_RS23175;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AC00_RS23175;old_locus_tag=AC00_0097 NZ_JJLU01000006.1 Protein Homology CDS 6967 7884 . + 0 ID=cds-WP_000595482.1;Parent=gene-AC00_RS23175;Dbxref=GenBank:WP_000595482.1;Name=WP_000595482.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=AC00_RS23175;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_000595482.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 8115 8627 . + . ID=gene-AC00_RS23170;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=AC00_RS23170;old_locus_tag=AC00_0099 NZ_JJLU01000006.1 Protein Homology CDS 8115 8627 . + 0 ID=cds-WP_000014320.1;Parent=gene-AC00_RS23170;Dbxref=GenBank:WP_000014320.1;Name=WP_000014320.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308128.2;locus_tag=AC00_RS23170;product=secA translation cis-regulator SecM;protein_id=WP_000014320.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 8689 11394 . + . ID=gene-AC00_RS23165;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AC00_RS23165;old_locus_tag=AC00_0100 NZ_JJLU01000006.1 Protein Homology CDS 8689 11394 . + 0 ID=cds-WP_000905780.1;Parent=gene-AC00_RS23165;Dbxref=GenBank:WP_000905780.1;Name=WP_000905780.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308129.1;locus_tag=AC00_RS23165;product=preprotein translocase subunit SecA;protein_id=WP_000905780.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 11454 11843 . + . ID=gene-AC00_RS23160;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=AC00_RS23160;old_locus_tag=AC00_0101 NZ_JJLU01000006.1 Protein Homology CDS 11454 11843 . + 0 ID=cds-WP_000736046.1-2;Parent=gene-AC00_RS23160;Dbxref=GenBank:WP_000736046.1;Name=WP_000736046.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414641.1;locus_tag=AC00_RS23160;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_000736046.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 12407 12604 . - . ID=gene-AC00_RS23155;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=AC00_RS23155;old_locus_tag=AC00_0102 NZ_JJLU01000006.1 Protein Homology CDS 12407 12604 . - 0 ID=cds-WP_000005042.1-2;Parent=gene-AC00_RS23155;Dbxref=GenBank:WP_000005042.1;Name=WP_000005042.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308132.1;locus_tag=AC00_RS23155;product=DNA gyrase inhibitor YacG;protein_id=WP_000005042.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 12614 13357 . - . ID=gene-AC00_RS23150;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=AC00_RS23150;old_locus_tag=AC00_0103 NZ_JJLU01000006.1 Protein Homology CDS 12614 13357 . - 0 ID=cds-WP_001194734.1;Parent=gene-AC00_RS23150;Dbxref=GenBank:WP_001194734.1;Name=WP_001194734.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414644.1;locus_tag=AC00_RS23150;product=cell division protein ZapD;protein_id=WP_001194734.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 13357 13977 . - . ID=gene-AC00_RS23145;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AC00_RS23145;old_locus_tag=AC00_0104 NZ_JJLU01000006.1 Protein Homology CDS 13357 13977 . - 0 ID=cds-WP_001269510.1;Parent=gene-AC00_RS23145;Dbxref=GenBank:WP_001269510.1;Name=WP_001269510.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=AC00_RS23145;product=dephospho-CoA kinase;protein_id=WP_001269510.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 14002 14046 . + . ID=gene-AC00_RS30830;Name=AC00_RS30830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30830 NZ_JJLU01000006.1 Protein Homology CDS 14002 14046 . + 0 ID=cds-WP_120795372.1;Parent=gene-AC00_RS30830;Dbxref=GenBank:WP_120795372.1;Name=WP_120795372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518737.1;locus_tag=AC00_RS30830;product=protein YacM;protein_id=WP_120795372.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 14202 15245 . + . ID=gene-AC00_RS23140;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=AC00_RS23140;old_locus_tag=AC00_0105 NZ_JJLU01000006.1 Protein Homology CDS 14202 15245 . + 0 ID=cds-WP_032222088.1;Parent=gene-AC00_RS23140;Dbxref=GenBank:WP_032222088.1;Name=WP_032222088.1;Ontology_term=GO:0009117,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=AC00_RS23140;product=GMP reductase;protein_id=WP_032222088.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 15280 16482 . - . ID=gene-AC00_RS23135;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=AC00_RS23135;old_locus_tag=AC00_0106 NZ_JJLU01000006.1 Protein Homology CDS 15280 16482 . - 0 ID=cds-WP_032280252.1;Parent=gene-AC00_RS23135;Dbxref=GenBank:WP_032280252.1;Name=WP_032280252.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706061.1;locus_tag=AC00_RS23135;product=protein transport protein HofC;protein_id=WP_032280252.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 16472 17857 . - . ID=gene-AC00_RS23130;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=AC00_RS23130;old_locus_tag=AC00_0107 NZ_JJLU01000006.1 Protein Homology CDS 16472 17857 . - 0 ID=cds-WP_032280253.1;Parent=gene-AC00_RS23130;Dbxref=GenBank:WP_032280253.1;Name=WP_032280253.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308138.1;locus_tag=AC00_RS23130;product=type II secretion system protein GspE;protein_id=WP_032280253.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 17867 18307 . - . ID=gene-AC00_RS23125;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=AC00_RS23125;old_locus_tag=AC00_0108 NZ_JJLU01000006.1 Protein Homology CDS 17867 18307 . - 0 ID=cds-WP_032280254.1;Parent=gene-AC00_RS23125;Dbxref=GenBank:WP_032280254.1;Name=WP_032280254.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414650.1;locus_tag=AC00_RS23125;product=prepilin peptidase-dependent pilin;protein_id=WP_032280254.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 18510 19403 . - . ID=gene-AC00_RS23120;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=AC00_RS23120;old_locus_tag=AC00_0109 NZ_JJLU01000006.1 Protein Homology CDS 18510 19403 . - 0 ID=cds-WP_001135168.1;Parent=gene-AC00_RS23120;Dbxref=GenBank:WP_001135168.1;Name=WP_001135168.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308140.1;locus_tag=AC00_RS23120;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_001135168.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 19491 20042 . + . ID=gene-AC00_RS23115;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AC00_RS23115;old_locus_tag=AC00_0110 NZ_JJLU01000006.1 Protein Homology CDS 19491 20042 . + 0 ID=cds-WP_000923726.1;Parent=gene-AC00_RS23115;Dbxref=GenBank:WP_000923726.1;Name=WP_000923726.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308141.1;locus_tag=AC00_RS23115;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_000923726.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 20039 20893 . + . ID=gene-AC00_RS23110;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=AC00_RS23110;old_locus_tag=AC00_0111 NZ_JJLU01000006.1 Protein Homology CDS 20039 20893 . + 0 ID=cds-WP_032280256.1;Parent=gene-AC00_RS23110;Dbxref=GenBank:WP_032280256.1;Name=WP_032280256.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414653.1;locus_tag=AC00_RS23110;product=beta-lactamase regulator AmpE;protein_id=WP_032280256.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 20936 22309 . - . ID=gene-AC00_RS23105;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=AC00_RS23105;old_locus_tag=AC00_0112 NZ_JJLU01000006.1 Protein Homology CDS 20936 22309 . - 0 ID=cds-WP_000969915.1;Parent=gene-AC00_RS23105;Dbxref=GenBank:WP_000969915.1;Name=WP_000969915.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414654.1;locus_tag=AC00_RS23105;product=aromatic amino acid transporter AroP;protein_id=WP_000969915.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 22850 23614 . + . ID=gene-AC00_RS23100;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=AC00_RS23100;old_locus_tag=AC00_0113 NZ_JJLU01000006.1 Protein Homology CDS 22850 23614 . + 0 ID=cds-WP_000331776.1;Parent=gene-AC00_RS23100;Dbxref=GenBank:WP_000331776.1;Name=WP_000331776.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=AC00_RS23100;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_000331776.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 23775 26438 . + . ID=gene-AC00_RS23095;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AC00_RS23095;old_locus_tag=AC00_0114 NZ_JJLU01000006.1 Protein Homology CDS 23775 26438 . + 0 ID=cds-WP_000003820.1;Parent=gene-AC00_RS23095;Dbxref=GenBank:WP_000003820.1;Name=WP_000003820.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=AC00_RS23095;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_000003820.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 26453 28648 . + . ID=gene-AC00_RS23090;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AC00_RS23090;old_locus_tag=AC00_0115 NZ_JJLU01000006.1 Protein Homology CDS 26453 28648 . + 0 ID=cds-WP_071999202.1;Parent=gene-AC00_RS23090;Dbxref=GenBank:WP_071999202.1;Name=WP_071999202.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686092.1;locus_tag=AC00_RS23090;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_071999202.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 28856 30280 . + . ID=gene-AC00_RS23085;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AC00_RS23085;old_locus_tag=AC00_0116 NZ_JJLU01000006.1 Protein Homology CDS 28856 30280 . + 0 ID=cds-WP_000102485.1;Parent=gene-AC00_RS23085;Dbxref=GenBank:WP_000102485.1;Name=WP_000102485.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=AC00_RS23085;product=dihydrolipoyl dehydrogenase;protein_id=WP_000102485.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 30351 32204 . - . ID=gene-AC00_RS23080;Name=yacH;gbkey=Gene;gene=yacH;gene_biotype=protein_coding;locus_tag=AC00_RS23080;old_locus_tag=AC00_0117 NZ_JJLU01000006.1 Protein Homology CDS 30351 32204 . - 0 ID=cds-WP_032280257.1;Parent=gene-AC00_RS23080;Dbxref=GenBank:WP_032280257.1;Name=WP_032280257.1;gbkey=CDS;gene=yacH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308148.1;locus_tag=AC00_RS23080;product=DUF3300 domain-containing protein;protein_id=WP_032280257.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 32559 35156 . + . ID=gene-AC00_RS23075;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=AC00_RS23075;old_locus_tag=AC00_0118 NZ_JJLU01000006.1 Protein Homology CDS 32559 35156 . + 0 ID=cds-WP_032280258.1;Parent=gene-AC00_RS23075;Dbxref=GenBank:WP_032280258.1;Name=WP_032280258.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414660.1;locus_tag=AC00_RS23075;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_032280258.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 35331 35693 . + . ID=gene-AC00_RS23070;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=AC00_RS23070;old_locus_tag=AC00_0119 NZ_JJLU01000006.1 Protein Homology CDS 35331 35693 . + 0 ID=cds-WP_000384306.1;Parent=gene-AC00_RS23070;Dbxref=GenBank:WP_000384306.1;Name=WP_000384306.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=AC00_RS23070;product=protein YacL;protein_id=WP_000384306.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 35731 36525 . - . ID=gene-AC00_RS23065;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=AC00_RS23065;old_locus_tag=AC00_0120 NZ_JJLU01000006.1 Protein Homology CDS 35731 36525 . - 0 ID=cds-WP_000734287.1;Parent=gene-AC00_RS23065;Dbxref=GenBank:WP_000734287.1;Name=WP_000734287.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308151.1;locus_tag=AC00_RS23065;product=adenosylmethionine decarboxylase;protein_id=WP_000734287.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 36541 37407 . - . ID=gene-AC00_RS23060;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=AC00_RS23060;old_locus_tag=AC00_0121 NZ_JJLU01000006.1 Protein Homology CDS 36541 37407 . - 0 ID=cds-WP_000818414.1;Parent=gene-AC00_RS23060;Dbxref=GenBank:WP_000818414.1;Name=WP_000818414.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308152.1;locus_tag=AC00_RS23060;product=polyamine aminopropyltransferase;protein_id=WP_000818414.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 37513 37860 . - . ID=gene-AC00_RS23055;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=AC00_RS23055;old_locus_tag=AC00_0122 NZ_JJLU01000006.1 Protein Homology CDS 37513 37860 . - 0 ID=cds-WP_032280259.1;Parent=gene-AC00_RS23055;Dbxref=GenBank:WP_032280259.1;Name=WP_032280259.1;gbkey=CDS;gene=yacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=AC00_RS23055;product=YacC family pilotin-like protein;protein_id=WP_032280259.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 38026 39576 . + . ID=gene-AC00_RS23050;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=AC00_RS23050;old_locus_tag=AC00_0123 NZ_JJLU01000006.1 Protein Homology CDS 38026 39576 . + 0 ID=cds-WP_032280260.1;Parent=gene-AC00_RS23050;Dbxref=GenBank:WP_032280260.1;Name=WP_032280260.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308154.1;locus_tag=AC00_RS23050;product=multicopper oxidase CueO;protein_id=WP_032280260.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 39623 42013 . - . ID=gene-AC00_RS23045;Name=gcd;gbkey=Gene;gene=gcd;gene_biotype=protein_coding;locus_tag=AC00_RS23045;old_locus_tag=AC00_0124 NZ_JJLU01000006.1 Protein Homology CDS 39623 42013 . - 0 ID=cds-WP_032280261.1;Parent=gene-AC00_RS23045;Dbxref=GenBank:WP_032280261.1;Name=WP_032280261.1;gbkey=CDS;gene=gcd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414666.1;locus_tag=AC00_RS23045;product=quinoprotein glucose dehydrogenase;protein_id=WP_032280261.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 42219 42755 . + . ID=gene-AC00_RS23040;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AC00_RS23040;old_locus_tag=AC00_0125 NZ_JJLU01000006.1 Protein Homology CDS 42219 42755 . + 0 ID=cds-WP_000683335.1;Parent=gene-AC00_RS23040;Dbxref=GenBank:WP_000683335.1;Name=WP_000683335.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=AC00_RS23040;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_000683335.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 42796 43458 . - . ID=gene-AC00_RS23035;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=AC00_RS23035;old_locus_tag=AC00_0126 NZ_JJLU01000006.1 Protein Homology CDS 42796 43458 . - 0 ID=cds-WP_000651599.1;Parent=gene-AC00_RS23035;Dbxref=GenBank:WP_000651599.1;Name=WP_000651599.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=AC00_RS23035;product=carbonate dehydratase;protein_id=WP_000651599.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 43567 44493 . + . ID=gene-AC00_RS23030;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=AC00_RS23030;old_locus_tag=AC00_0127 NZ_JJLU01000006.1 Protein Homology CDS 43567 44493 . + 0 ID=cds-WP_000150637.1;Parent=gene-AC00_RS23030;Dbxref=GenBank:WP_000150637.1;Name=WP_000150637.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;gene=yadG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=AC00_RS23030;product=ABC transporter ATP-binding protein;protein_id=WP_000150637.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 44490 45260 . + . ID=gene-AC00_RS23025;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=AC00_RS23025;old_locus_tag=AC00_0128 NZ_JJLU01000006.1 Protein Homology CDS 44490 45260 . + 0 ID=cds-WP_032280262.1;Parent=gene-AC00_RS23025;Dbxref=GenBank:WP_032280262.1;Name=WP_032280262.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yadH;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=AC00_RS23025;product=ABC transporter permease;protein_id=WP_032280262.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 45365 45805 . + . ID=gene-AC00_RS23020;Name=yadI;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=AC00_RS23020;old_locus_tag=AC00_0129 NZ_JJLU01000006.1 Protein Homology CDS 45365 45805 . + 0 ID=cds-WP_000901987.1;Parent=gene-AC00_RS23020;Dbxref=GenBank:WP_000901987.1;Name=WP_000901987.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;gene=yadI;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414671.1;locus_tag=AC00_RS23020;product=PTS sugar transporter subunit IIA;protein_id=WP_000901987.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 45869 47098 . + . ID=gene-AC00_RS23015;Name=yadE;gbkey=Gene;gene=yadE;gene_biotype=protein_coding;locus_tag=AC00_RS23015;old_locus_tag=AC00_0130 NZ_JJLU01000006.1 Protein Homology CDS 45869 47098 . + 0 ID=cds-WP_032288138.1;Parent=gene-AC00_RS23015;Dbxref=GenBank:WP_032288138.1;Name=WP_032288138.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;gene=yadE;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414672.1;locus_tag=AC00_RS23015;product=polysaccharide deacetylase family protein;protein_id=WP_032288138.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 47102 47482 . - . ID=gene-AC00_RS23010;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=AC00_RS23010;old_locus_tag=AC00_0131 NZ_JJLU01000006.1 Protein Homology CDS 47102 47482 . - 0 ID=cds-WP_000621515.1;Parent=gene-AC00_RS23010;Dbxref=GenBank:WP_000621515.1;Name=WP_000621515.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=AC00_RS23010;product=aspartate 1-decarboxylase;protein_id=WP_000621515.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 47756 48628 . + . ID=gene-AC00_RS23005;Name=rpnC;gbkey=Gene;gene=rpnC;gene_biotype=protein_coding;locus_tag=AC00_RS23005;old_locus_tag=AC00_0133 NZ_JJLU01000006.1 Protein Homology CDS 47756 48628 . + 0 ID=cds-WP_032280263.1;Parent=gene-AC00_RS23005;Dbxref=GenBank:WP_032280263.1;Name=WP_032280263.1;gbkey=CDS;gene=rpnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308163.1;locus_tag=AC00_RS23005;product=recombination-promoting nuclease RpnC;protein_id=WP_032280263.1;transl_table=11 NZ_JJLU01000006.1 RefSeq pseudogene 48727 48906 . + . ID=gene-AC00_RS31090;Name=AC00_RS31090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31090;old_locus_tag=AC00_0134;partial=true;pseudo=true;start_range=.,48727 NZ_JJLU01000006.1 Protein Homology CDS 48727 48906 . + 0 ID=cds-AC00_RS31090;Parent=gene-AC00_RS31090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308163.1;locus_tag=AC00_RS31090;partial=true;product=hypothetical protein;pseudo=true;start_range=.,48727;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 49002 49853 . - . ID=gene-AC00_RS22995;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AC00_RS22995;old_locus_tag=AC00_0135 NZ_JJLU01000006.1 Protein Homology CDS 49002 49853 . - 0 ID=cds-WP_032280264.1;Parent=gene-AC00_RS22995;Dbxref=GenBank:WP_032280264.1;Name=WP_032280264.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308164.1;locus_tag=AC00_RS22995;product=pantoate--beta-alanine ligase;protein_id=WP_032280264.1;transl_table=11 NZ_JJLU01000006.1 RefSeq gene 49865 50659 . - . ID=gene-AC00_RS22990;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AC00_RS22990;old_locus_tag=AC00_0136 NZ_JJLU01000006.1 Protein Homology CDS 49865 50659 . - 0 ID=cds-WP_032280265.1;Parent=gene-AC00_RS22990;Dbxref=GenBank:WP_032280265.1;Name=WP_032280265.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=AC00_RS22990;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_032280265.1;transl_table=11 NZ_JJLU01000006.1 RefSeq pseudogene 50772 51386 . - . ID=gene-AC00_RS0123680;Name=AC00_RS0123680;end_range=51386,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123680;partial=true;pseudo=true NZ_JJLU01000006.1 Protein Homology CDS 50772 51386 . - 0 ID=cds-AC00_RS0123680;Parent=gene-AC00_RS0123680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=51386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001462196.1;locus_tag=AC00_RS0123680;partial=true;product=fimbrial-like adhesin;pseudo=true;transl_table=11 NZ_JJLU01000006.1 RefSeq pseudogene 51401 51730 . - . ID=gene-AC00_RS22985;Name=AC00_RS22985;end_range=51730,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22985;old_locus_tag=AC00_0137;partial=true;pseudo=true NZ_JJLU01000006.1 Protein Homology CDS 51401 51730 . - 0 ID=cds-AC00_RS22985;Parent=gene-AC00_RS22985;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=51730,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS22985;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000007.1 1 72839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000007.1 RefSeq region 1 72839 . + . ID=NZ_JJLU01000007.1:1..72839;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000007.1 RefSeq gene 1 254 . - . ID=gene-AC00_RS0123685;Name=AC00_RS0123685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123685;old_locus_tag=AC00_0138;partial=true;start_range=.,1 NZ_JJLU01000007.1 Protein Homology CDS 1 254 . - 0 ID=cds-WP_001483354.1;Parent=gene-AC00_RS0123685;Dbxref=GenBank:WP_001483354.1;Name=WP_001483354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123685;partial=true;product=IS1-like element transposase;protein_id=WP_001483354.1;start_range=.,1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 288 836 . - . ID=gene-AC00_RS22980;Name=AC00_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22980;old_locus_tag=AC00_0139 NZ_JJLU01000007.1 Protein Homology CDS 288 836 . - 0 ID=cds-WP_032280269.1;Parent=gene-AC00_RS22980;Dbxref=GenBank:WP_032280269.1;Name=WP_032280269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953150.1;locus_tag=AC00_RS22980;product=fimbrial-like protein;protein_id=WP_032280269.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 863 1468 . - . ID=gene-AC00_RS22975;Name=yadL;gbkey=Gene;gene=yadL;gene_biotype=protein_coding;locus_tag=AC00_RS22975;old_locus_tag=AC00_0140 NZ_JJLU01000007.1 Protein Homology CDS 863 1468 . - 0 ID=cds-WP_032280270.1;Parent=gene-AC00_RS22975;Dbxref=GenBank:WP_032280270.1;Name=WP_032280270.1;gbkey=CDS;gene=yadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143198.1;locus_tag=AC00_RS22975;product=fimbrial-like protein YadL;protein_id=WP_032280270.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 1483 2052 . - . ID=gene-AC00_RS22970;Name=AC00_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22970;old_locus_tag=AC00_0141 NZ_JJLU01000007.1 Protein Homology CDS 1483 2052 . - 0 ID=cds-WP_077757336.1;Parent=gene-AC00_RS22970;Dbxref=GenBank:WP_077757336.1;Name=WP_077757336.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001361645.1;locus_tag=AC00_RS22970;product=fimbrial protein;protein_id=WP_077757336.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 2072 4660 . - . ID=gene-AC00_RS22965;Name=AC00_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22965;old_locus_tag=AC00_0142 NZ_JJLU01000007.1 Protein Homology CDS 2072 4660 . - 0 ID=cds-WP_404855054.1;Parent=gene-AC00_RS22965;Dbxref=GenBank:WP_404855054.1;Name=WP_404855054.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169653.1;locus_tag=AC00_RS22965;product=outer membrane usher protein;protein_id=WP_404855054.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 4707 5399 . - . ID=gene-AC00_RS22960;Name=AC00_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22960;old_locus_tag=AC00_0143 NZ_JJLU01000007.1 Protein Homology CDS 4707 5399 . - 0 ID=cds-WP_032280272.1;Parent=gene-AC00_RS22960;Dbxref=GenBank:WP_032280272.1;Name=WP_032280272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308171.1;locus_tag=AC00_RS22960;product=fimbrial chaperone;protein_id=WP_032280272.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 5552 6136 . - . ID=gene-AC00_RS22955;Name=yadN;gbkey=Gene;gene=yadN;gene_biotype=protein_coding;locus_tag=AC00_RS22955;old_locus_tag=AC00_0144 NZ_JJLU01000007.1 Protein Homology CDS 5552 6136 . - 0 ID=cds-WP_032280273.1;Parent=gene-AC00_RS22955;Dbxref=GenBank:WP_032280273.1;Name=WP_032280273.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yadN;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414683.1;locus_tag=AC00_RS22955;product=fimbrial protein;protein_id=WP_032280273.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 6497 6976 . - . ID=gene-AC00_RS22950;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AC00_RS22950;old_locus_tag=AC00_0145 NZ_JJLU01000007.1 Protein Homology CDS 6497 6976 . - 0 ID=cds-WP_000215128.1;Parent=gene-AC00_RS22950;Dbxref=GenBank:WP_000215128.1;Name=WP_000215128.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414684.1;locus_tag=AC00_RS22950;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_000215128.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 6973 8370 . - . ID=gene-AC00_RS22945;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AC00_RS22945;old_locus_tag=AC00_0146 NZ_JJLU01000007.1 Protein Homology CDS 6973 8370 . - 0 ID=cds-WP_010723084.1;Parent=gene-AC00_RS22945;Dbxref=GenBank:WP_010723084.1;Name=WP_010723084.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=AC00_RS22945;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_010723084.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 8430 9326 . - . ID=gene-AC00_RS22940;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=AC00_RS22940;old_locus_tag=AC00_0147 NZ_JJLU01000007.1 Protein Homology CDS 8430 9326 . - 0 ID=cds-WP_032213433.1;Parent=gene-AC00_RS22940;Dbxref=GenBank:WP_032213433.1;Name=WP_032213433.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001432381.1;locus_tag=AC00_RS22940;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_032213433.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 9393 9848 . - . ID=gene-AC00_RS22935;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AC00_RS22935;old_locus_tag=AC00_0148 NZ_JJLU01000007.1 Protein Homology CDS 9393 9848 . - 0 ID=cds-WP_001155227.1;Parent=gene-AC00_RS22935;Dbxref=GenBank:WP_001155227.1;Name=WP_001155227.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=AC00_RS22935;product=RNA polymerase-binding protein DksA;protein_id=WP_001155227.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 10026 10730 . - . ID=gene-AC00_RS22930;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=AC00_RS22930;old_locus_tag=AC00_0149 NZ_JJLU01000007.1 Protein Homology CDS 10026 10730 . - 0 ID=cds-WP_000396036.1;Parent=gene-AC00_RS22930;Dbxref=GenBank:WP_000396036.1;Name=WP_000396036.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308177.1;locus_tag=AC00_RS22930;product=DNA/RNA nuclease SfsA;protein_id=WP_000396036.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 10745 11275 . - . ID=gene-AC00_RS22925;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=AC00_RS22925;old_locus_tag=AC00_0150 NZ_JJLU01000007.1 Protein Homology CDS 10745 11275 . - 0 ID=cds-WP_001283249.1;Parent=gene-AC00_RS22925;Dbxref=GenBank:WP_001283249.1;Name=WP_001283249.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308178.2;locus_tag=AC00_RS22925;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_001283249.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 11349 13778 . + . ID=gene-AC00_RS22920;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=AC00_RS22920;old_locus_tag=AC00_0151 NZ_JJLU01000007.1 Protein Homology CDS 11349 13778 . + 0 ID=cds-WP_032280274.1;Parent=gene-AC00_RS22920;Dbxref=GenBank:WP_032280274.1;Name=WP_032280274.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308179.2;locus_tag=AC00_RS22920;product=ATP-dependent helicase HrpB;protein_id=WP_032280274.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 13910 16444 . + . ID=gene-AC00_RS22915;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=AC00_RS22915;old_locus_tag=AC00_0152 NZ_JJLU01000007.1 Protein Homology CDS 13910 16444 . + 0 ID=cds-WP_032280275.1;Parent=gene-AC00_RS22915;Dbxref=GenBank:WP_032280275.1;Name=WP_032280275.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308180.1;locus_tag=AC00_RS22915;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_032280275.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 16664 18907 . + . ID=gene-AC00_RS22910;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=AC00_RS22910;old_locus_tag=AC00_0154 NZ_JJLU01000007.1 Protein Homology CDS 16664 18907 . + 0 ID=cds-WP_000124421.1;Parent=gene-AC00_RS22910;Dbxref=GenBank:WP_000124421.1;Name=WP_000124421.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414692.1;locus_tag=AC00_RS22910;product=ferrichrome porin FhuA;protein_id=WP_000124421.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 18958 19755 . + . ID=gene-AC00_RS22905;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=AC00_RS22905;old_locus_tag=AC00_0155 NZ_JJLU01000007.1 Protein Homology CDS 18958 19755 . + 0 ID=cds-WP_001158926.1;Parent=gene-AC00_RS22905;Dbxref=GenBank:WP_001158926.1;Name=WP_001158926.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308182.1;locus_tag=AC00_RS22905;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_001158926.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 19755 20645 . + . ID=gene-AC00_RS22900;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=AC00_RS22900;old_locus_tag=AC00_0156 NZ_JJLU01000007.1 Protein Homology CDS 19755 20645 . + 0 ID=cds-WP_001310529.1;Parent=gene-AC00_RS22900;Dbxref=GenBank:WP_001310529.1;Name=WP_001310529.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414694.1;locus_tag=AC00_RS22900;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_001310529.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 20642 22624 . + . ID=gene-AC00_RS22895;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=AC00_RS22895;old_locus_tag=AC00_0157 NZ_JJLU01000007.1 Protein Homology CDS 20642 22624 . + 0 ID=cds-WP_032280276.1;Parent=gene-AC00_RS22895;Dbxref=GenBank:WP_032280276.1;Name=WP_032280276.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308184.1;locus_tag=AC00_RS22895;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_032280276.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 22659 23939 . - . ID=gene-AC00_RS22890;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AC00_RS22890;old_locus_tag=AC00_0158 NZ_JJLU01000007.1 Protein Homology CDS 22659 23939 . - 0 ID=cds-WP_032280277.1;Parent=gene-AC00_RS22890;Dbxref=GenBank:WP_032280277.1;Name=WP_032280277.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=AC00_RS22890;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_032280277.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 24105 24152 . + . ID=gene-AC00_RS31095;Name=yadX;gbkey=Gene;gene=yadX;gene_biotype=protein_coding;locus_tag=AC00_RS31095 NZ_JJLU01000007.1 Protein Homology CDS 24105 24152 . + 0 ID=cds-WP_211180485.1;Parent=gene-AC00_RS31095;Dbxref=GenBank:WP_211180485.1;Name=WP_211180485.1;gbkey=CDS;gene=yadX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051173.1;locus_tag=AC00_RS31095;product=protein YadX;protein_id=WP_211180485.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 24164 25585 . + . ID=gene-AC00_RS22885;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=AC00_RS22885;old_locus_tag=AC00_0159 NZ_JJLU01000007.1 Protein Homology CDS 24164 25585 . + 0 ID=cds-WP_032280278.1;Parent=gene-AC00_RS22885;Dbxref=GenBank:WP_032280278.1;Name=WP_032280278.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308186.1;locus_tag=AC00_RS22885;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_032280278.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 25609 25674 . + . ID=gene-AC00_RS30155;Name=yadW;gbkey=Gene;gene=yadW;gene_biotype=protein_coding;locus_tag=AC00_RS30155 NZ_JJLU01000007.1 Protein Homology CDS 25609 25674 . + 0 ID=cds-WP_120795373.1;Parent=gene-AC00_RS30155;Dbxref=GenBank:WP_120795373.1;Name=WP_120795373.1;gbkey=CDS;gene=yadW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518738.1;locus_tag=AC00_RS30155;product=small protein YadW;protein_id=WP_120795373.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 25667 26011 . + . ID=gene-AC00_RS22880;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AC00_RS22880;old_locus_tag=AC00_0160 NZ_JJLU01000007.1 Protein Homology CDS 25667 26011 . + 0 ID=cds-WP_001295564.1;Parent=gene-AC00_RS22880;Dbxref=GenBank:WP_001295564.1;Name=WP_001295564.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=AC00_RS22880;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_001295564.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 26058 26681 . - . ID=gene-AC00_RS22875;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=AC00_RS22875;old_locus_tag=AC00_0161 NZ_JJLU01000007.1 Protein Homology CDS 26058 26681 . - 0 ID=cds-WP_000964221.1;Parent=gene-AC00_RS22875;Dbxref=GenBank:WP_000964221.1;Name=WP_000964221.1;gbkey=CDS;gene=yadS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414699.1;locus_tag=AC00_RS22875;product=TRIC cation channel family protein;protein_id=WP_000964221.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 26719 27519 . - . ID=gene-AC00_RS22870;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=AC00_RS22870;old_locus_tag=AC00_0162 NZ_JJLU01000007.1 Protein Homology CDS 26719 27519 . - 0 ID=cds-WP_001129927.1;Parent=gene-AC00_RS22870;Dbxref=GenBank:WP_001129927.1;Name=WP_001129927.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414700.1;locus_tag=AC00_RS22870;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_001129927.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 27512 28210 . - . ID=gene-AC00_RS22865;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=AC00_RS22865;old_locus_tag=AC00_0163 NZ_JJLU01000007.1 Protein Homology CDS 27512 28210 . - 0 ID=cds-WP_000689844.1;Parent=gene-AC00_RS22865;Dbxref=GenBank:WP_000689844.1;Name=WP_000689844.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=AC00_RS22865;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_000689844.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 28294 29811 . + . ID=gene-AC00_RS22860;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AC00_RS22860;old_locus_tag=AC00_0164 NZ_JJLU01000007.1 Protein Homology CDS 28294 29811 . + 0 ID=cds-WP_032280279.1;Parent=gene-AC00_RS22860;Dbxref=GenBank:WP_032280279.1;Name=WP_032280279.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414702.1;locus_tag=AC00_RS22860;product=dGTPase;protein_id=WP_032280279.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 29941 31365 . + . ID=gene-AC00_RS22855;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=AC00_RS22855;old_locus_tag=AC00_0165 NZ_JJLU01000007.1 Protein Homology CDS 29941 31365 . + 0 ID=cds-WP_000753946.1;Parent=gene-AC00_RS22855;Dbxref=GenBank:WP_000753946.1;Name=WP_000753946.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308192.1;locus_tag=AC00_RS22855;product=serine endoprotease DegP;protein_id=WP_000753946.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 31520 32677 . + . ID=gene-AC00_RS22850;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=AC00_RS22850;old_locus_tag=AC00_0166 NZ_JJLU01000007.1 Protein Homology CDS 31520 32677 . + 0 ID=cds-WP_028132486.1;Parent=gene-AC00_RS22850;Dbxref=GenBank:WP_028132486.1;Name=WP_028132486.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308193.1;locus_tag=AC00_RS22850;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_028132486.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 32766 33152 . - . ID=gene-AC00_RS22845;Name=yaeH;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=AC00_RS22845;old_locus_tag=AC00_0167 NZ_JJLU01000007.1 Protein Homology CDS 32766 33152 . - 0 ID=cds-WP_000272188.1;Parent=gene-AC00_RS22845;Dbxref=GenBank:WP_000272188.1;Name=WP_000272188.1;gbkey=CDS;gene=yaeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=AC00_RS22845;product=DUF3461 family protein;protein_id=WP_000272188.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 33466 34290 . - . ID=gene-AC00_RS22840;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AC00_RS22840;old_locus_tag=AC00_0168 NZ_JJLU01000007.1 Protein Homology CDS 33466 34290 . - 0 ID=cds-WP_001186650.1;Parent=gene-AC00_RS22840;Dbxref=GenBank:WP_001186650.1;Name=WP_001186650.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=AC00_RS22840;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_001186650.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 34321 36993 . - . ID=gene-AC00_RS22835;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AC00_RS22835;old_locus_tag=AC00_0169 NZ_JJLU01000007.1 Protein Homology CDS 34321 36993 . - 0 ID=cds-WP_032288141.1;Parent=gene-AC00_RS22835;Dbxref=GenBank:WP_032288141.1;Name=WP_032288141.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308196.1;locus_tag=AC00_RS22835;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_032288141.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 37055 37849 . - . ID=gene-AC00_RS22830;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AC00_RS22830;old_locus_tag=AC00_0170 NZ_JJLU01000007.1 Protein Homology CDS 37055 37849 . - 0 ID=cds-WP_001018194.1;Parent=gene-AC00_RS22830;Dbxref=GenBank:WP_001018194.1;Name=WP_001018194.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308197.1;locus_tag=AC00_RS22830;product=type I methionyl aminopeptidase;protein_id=WP_001018194.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 38217 38942 . + . ID=gene-AC00_RS22825;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AC00_RS22825;old_locus_tag=AC00_0171 NZ_JJLU01000007.1 Protein Homology CDS 38217 38942 . + 0 ID=cds-WP_000246882.1;Parent=gene-AC00_RS22825;Dbxref=GenBank:WP_000246882.1;Name=WP_000246882.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=AC00_RS22825;product=30S ribosomal protein S2;protein_id=WP_000246882.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 39077 39928 . + . ID=gene-AC00_RS22820;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AC00_RS22820;old_locus_tag=AC00_0173 NZ_JJLU01000007.1 Protein Homology CDS 39077 39928 . + 0 ID=cds-WP_000818114.1;Parent=gene-AC00_RS22820;Dbxref=GenBank:WP_000818114.1;Name=WP_000818114.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=AC00_RS22820;product=translation elongation factor Ts;protein_id=WP_000818114.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 40075 40800 . + . ID=gene-AC00_RS22815;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AC00_RS22815;old_locus_tag=AC00_0174 NZ_JJLU01000007.1 Protein Homology CDS 40075 40800 . + 0 ID=cds-WP_000224573.1;Parent=gene-AC00_RS22815;Dbxref=GenBank:WP_000224573.1;Name=WP_000224573.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=AC00_RS22815;product=UMP kinase;protein_id=WP_000224573.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 40950 41507 . + . ID=gene-AC00_RS22810;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AC00_RS22810;old_locus_tag=AC00_0175 NZ_JJLU01000007.1 Protein Homology CDS 40950 41507 . + 0 ID=cds-WP_000622418.1;Parent=gene-AC00_RS22810;Dbxref=GenBank:WP_000622418.1;Name=WP_000622418.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=AC00_RS22810;product=ribosome recycling factor;protein_id=WP_000622418.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 41599 42795 . + . ID=gene-AC00_RS22805;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=AC00_RS22805;old_locus_tag=AC00_0176 NZ_JJLU01000007.1 Protein Homology CDS 41599 42795 . + 0 ID=cds-WP_000811923.1;Parent=gene-AC00_RS22805;Dbxref=GenBank:WP_000811923.1;Name=WP_000811923.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414715.1;locus_tag=AC00_RS22805;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_000811923.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 42984 43742 . + . ID=gene-AC00_RS22800;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=AC00_RS22800;old_locus_tag=AC00_0177 NZ_JJLU01000007.1 Protein Homology CDS 42984 43742 . + 0 ID=cds-WP_001295562.1;Parent=gene-AC00_RS22800;Dbxref=GenBank:WP_001295562.1;Name=WP_001295562.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308203.2;locus_tag=AC00_RS22800;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_001295562.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 43755 44612 . + . ID=gene-AC00_RS22795;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AC00_RS22795;old_locus_tag=AC00_0178 NZ_JJLU01000007.1 Protein Homology CDS 43755 44612 . + 0 ID=cds-WP_000922446.1;Parent=gene-AC00_RS22795;Dbxref=GenBank:WP_000922446.1;Name=WP_000922446.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=AC00_RS22795;product=phosphatidate cytidylyltransferase;protein_id=WP_000922446.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 44624 45976 . + . ID=gene-AC00_RS22790;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=AC00_RS22790;old_locus_tag=AC00_0179 NZ_JJLU01000007.1 Protein Homology CDS 44624 45976 . + 0 ID=cds-WP_032280280.1;Parent=gene-AC00_RS22790;Dbxref=GenBank:WP_032280280.1;Name=WP_032280280.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308205.1;locus_tag=AC00_RS22790;product=sigma E protease regulator RseP;protein_id=WP_032280280.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 46006 48438 . + . ID=gene-AC00_RS22785;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AC00_RS22785;old_locus_tag=AC00_0180 NZ_JJLU01000007.1 Protein Homology CDS 46006 48438 . + 0 ID=cds-WP_032280281.1;Parent=gene-AC00_RS22785;Dbxref=GenBank:WP_032280281.1;Name=WP_032280281.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=AC00_RS22785;product=outer membrane protein assembly factor BamA;protein_id=WP_032280281.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 48560 49045 . + . ID=gene-AC00_RS22780;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=AC00_RS22780;old_locus_tag=AC00_0181 NZ_JJLU01000007.1 Protein Homology CDS 48560 49045 . + 0 ID=cds-WP_000758956.1;Parent=gene-AC00_RS22780;Dbxref=GenBank:WP_000758956.1;Name=WP_000758956.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308207.1;locus_tag=AC00_RS22780;product=molecular chaperone Skp;protein_id=WP_000758956.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 49049 50074 . + . ID=gene-AC00_RS22775;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AC00_RS22775;old_locus_tag=AC00_0182 NZ_JJLU01000007.1 Protein Homology CDS 49049 50074 . + 0 ID=cds-WP_001139279.1;Parent=gene-AC00_RS22775;Dbxref=GenBank:WP_001139279.1;Name=WP_001139279.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=AC00_RS22775;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_001139279.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 50179 50634 . + . ID=gene-AC00_RS22770;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AC00_RS22770;old_locus_tag=AC00_0183 NZ_JJLU01000007.1 Protein Homology CDS 50179 50634 . + 0 ID=cds-WP_000210739.1;Parent=gene-AC00_RS22770;Dbxref=GenBank:WP_000210739.1;Name=WP_000210739.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=AC00_RS22770;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_000210739.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 50638 51426 . + . ID=gene-AC00_RS22765;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AC00_RS22765;old_locus_tag=AC00_0184 NZ_JJLU01000007.1 Protein Homology CDS 50638 51426 . + 0 ID=cds-WP_032280282.1;Parent=gene-AC00_RS22765;Dbxref=GenBank:WP_032280282.1;Name=WP_032280282.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=AC00_RS22765;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_032280282.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 51426 52574 . + . ID=gene-AC00_RS22760;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AC00_RS22760;old_locus_tag=AC00_0185 NZ_JJLU01000007.1 Protein Homology CDS 51426 52574 . + 0 ID=cds-WP_032280283.1;Parent=gene-AC00_RS22760;Dbxref=GenBank:WP_032280283.1;Name=WP_032280283.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414724.1;locus_tag=AC00_RS22760;product=lipid-A-disaccharide synthase;protein_id=WP_032280283.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 52571 53167 . + . ID=gene-AC00_RS22755;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AC00_RS22755;old_locus_tag=AC00_0186 NZ_JJLU01000007.1 Protein Homology CDS 52571 53167 . + 0 ID=cds-WP_032186056.1;Parent=gene-AC00_RS22755;Dbxref=GenBank:WP_032186056.1;Name=WP_032186056.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414725.1;locus_tag=AC00_RS22755;product=ribonuclease HII;protein_id=WP_032186056.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 53204 56686 . + . ID=gene-AC00_RS22750;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AC00_RS22750;old_locus_tag=AC00_0187 NZ_JJLU01000007.1 Protein Homology CDS 53204 56686 . + 0 ID=cds-WP_001294774.1;Parent=gene-AC00_RS22750;Dbxref=GenBank:WP_001294774.1;Name=WP_001294774.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308213.1;locus_tag=AC00_RS22750;product=DNA polymerase III subunit alpha;protein_id=WP_001294774.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 56699 57658 . + . ID=gene-AC00_RS22745;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=AC00_RS22745;old_locus_tag=AC00_0188 NZ_JJLU01000007.1 Protein Homology CDS 56699 57658 . + 0 ID=cds-WP_000055741.1;Parent=gene-AC00_RS22745;Dbxref=GenBank:WP_000055741.1;Name=WP_000055741.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=AC00_RS22745;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_000055741.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 57757 59898 . + . ID=gene-AC00_RS22740;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=AC00_RS22740;old_locus_tag=AC00_0189 NZ_JJLU01000007.1 Protein Homology CDS 57757 59898 . + 0 ID=cds-WP_001020971.1;Parent=gene-AC00_RS22740;Dbxref=GenBank:WP_001020971.1;Name=WP_001020971.1;gbkey=CDS;gene=ldcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414728.1;locus_tag=AC00_RS22740;product=lysine decarboxylase LdcC;protein_id=WP_001020971.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 59955 60344 . + . ID=gene-AC00_RS22735;Name=yaeR;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=AC00_RS22735;old_locus_tag=AC00_0190 NZ_JJLU01000007.1 Protein Homology CDS 59955 60344 . + 0 ID=cds-WP_032280284.1;Parent=gene-AC00_RS22735;Dbxref=GenBank:WP_032280284.1;Name=WP_032280284.1;gbkey=CDS;gene=yaeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=AC00_RS22735;product=VOC family protein;protein_id=WP_032280284.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 60409 61704 . + . ID=gene-AC00_RS22730;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AC00_RS22730;old_locus_tag=AC00_0191 NZ_JJLU01000007.1 Protein Homology CDS 60409 61704 . + 0 ID=cds-WP_032280285.1;Parent=gene-AC00_RS22730;Dbxref=GenBank:WP_032280285.1;Name=WP_032280285.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308217.1;locus_tag=AC00_RS22730;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_032280285.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 61757 62017 . - . ID=gene-AC00_RS22725;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=AC00_RS22725;old_locus_tag=AC00_0192 NZ_JJLU01000007.1 Protein Homology CDS 61757 62017 . - 0 ID=cds-WP_000062312.1;Parent=gene-AC00_RS22725;Dbxref=GenBank:WP_000062312.1;Name=WP_000062312.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=AC00_RS22725;product=Rho-binding antiterminator;protein_id=WP_000062312.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 62004 62204 . - . ID=gene-AC00_RS22720;Name=yaeP;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=AC00_RS22720;old_locus_tag=AC00_0193 NZ_JJLU01000007.1 Protein Homology CDS 62004 62204 . - 0 ID=cds-WP_000417058.1;Parent=gene-AC00_RS22720;Dbxref=GenBank:WP_000417058.1;Name=WP_000417058.1;gbkey=CDS;gene=yaeP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=AC00_RS22720;product=YaeP family protein;protein_id=WP_000417058.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 62370 62915 . + . ID=gene-AC00_RS22715;Name=yaeQ;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=AC00_RS22715;old_locus_tag=AC00_0194 NZ_JJLU01000007.1 Protein Homology CDS 62370 62915 . + 0 ID=cds-WP_001185290.1;Parent=gene-AC00_RS22715;Dbxref=GenBank:WP_001185290.1;Name=WP_001185290.1;gbkey=CDS;gene=yaeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414732.1;locus_tag=AC00_RS22715;product=YaeQ family protein;protein_id=WP_001185290.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 62912 63334 . + . ID=gene-AC00_RS22710;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=AC00_RS22710;old_locus_tag=AC00_0195 NZ_JJLU01000007.1 Protein Homology CDS 62912 63334 . + 0 ID=cds-WP_032280286.1;Parent=gene-AC00_RS22710;Dbxref=GenBank:WP_032280286.1;Name=WP_032280286.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308220.1;locus_tag=AC00_RS22710;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_032280286.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 63348 64058 . + . ID=gene-AC00_RS22705;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=AC00_RS22705;old_locus_tag=AC00_0196 NZ_JJLU01000007.1 Protein Homology CDS 63348 64058 . + 0 ID=cds-WP_032280287.1;Parent=gene-AC00_RS22705;Dbxref=GenBank:WP_032280287.1;Name=WP_032280287.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308221.1;locus_tag=AC00_RS22705;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_032280287.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 64258 65082 . - . ID=gene-AC00_RS22700;Name=yaeF;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;locus_tag=AC00_RS22700;old_locus_tag=AC00_0197 NZ_JJLU01000007.1 Protein Homology CDS 64258 65082 . - 0 ID=cds-WP_032280288.1;Parent=gene-AC00_RS22700;Dbxref=GenBank:WP_032280288.1;Name=WP_032280288.1;gbkey=CDS;gene=yaeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308222.1;locus_tag=AC00_RS22700;product=YaeF family permuted papain-like enzyme;protein_id=WP_032280288.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 65135 66853 . - . ID=gene-AC00_RS22695;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=AC00_RS22695;old_locus_tag=AC00_0198 NZ_JJLU01000007.1 Protein Homology CDS 65135 66853 . - 0 ID=cds-WP_032280289.1;Parent=gene-AC00_RS22695;Dbxref=GenBank:WP_032280289.1;Name=WP_032280289.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=AC00_RS22695;product=proline--tRNA ligase;protein_id=WP_032280289.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 66964 67671 . - . ID=gene-AC00_RS22690;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=AC00_RS22690;old_locus_tag=AC00_0199 NZ_JJLU01000007.1 Protein Homology CDS 66964 67671 . - 0 ID=cds-WP_032280290.1;Parent=gene-AC00_RS22690;Dbxref=GenBank:WP_032280290.1;Name=WP_032280290.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414737.1;locus_tag=AC00_RS22690;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_032280290.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 67668 68072 . - . ID=gene-AC00_RS22685;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=AC00_RS22685;old_locus_tag=AC00_0200 NZ_JJLU01000007.1 Protein Homology CDS 67668 68072 . - 0 ID=cds-WP_032237026.1;Parent=gene-AC00_RS22685;Dbxref=GenBank:WP_032237026.1;Name=WP_032237026.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414738.1;locus_tag=AC00_RS22685;product=Rcs stress response system protein RcsF;protein_id=WP_032237026.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 68190 69005 . - . ID=gene-AC00_RS22680;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AC00_RS22680;old_locus_tag=AC00_0201 NZ_JJLU01000007.1 Protein Homology CDS 68190 69005 . - 0 ID=cds-WP_000874224.1;Parent=gene-AC00_RS22680;Dbxref=GenBank:WP_000874224.1;Name=WP_000874224.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706143.1;locus_tag=AC00_RS22680;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_000874224.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 69045 69698 . - . ID=gene-AC00_RS22675;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=AC00_RS22675;old_locus_tag=AC00_0202 NZ_JJLU01000007.1 Protein Homology CDS 69045 69698 . - 0 ID=cds-WP_001294600.1;Parent=gene-AC00_RS22675;Dbxref=GenBank:WP_001294600.1;Name=WP_001294600.1;gbkey=CDS;gene=metI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=AC00_RS22675;product=methionine ABC transporter permease MetI;protein_id=WP_001294600.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 69691 70722 . - . ID=gene-AC00_RS22670;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AC00_RS22670;old_locus_tag=AC00_0203 NZ_JJLU01000007.1 Protein Homology CDS 69691 70722 . - 0 ID=cds-WP_000593994.1;Parent=gene-AC00_RS22670;Dbxref=GenBank:WP_000593994.1;Name=WP_000593994.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=AC00_RS22670;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_000593994.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 70910 71485 . + . ID=gene-AC00_RS22665;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=AC00_RS22665;old_locus_tag=AC00_0204 NZ_JJLU01000007.1 Protein Homology CDS 70910 71485 . + 0 ID=cds-WP_001140187.1;Parent=gene-AC00_RS22665;Dbxref=GenBank:WP_001140187.1;Name=WP_001140187.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308229.1;locus_tag=AC00_RS22665;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_001140187.1;transl_table=11 NZ_JJLU01000007.1 RefSeq gene 71848 72839 . + . ID=gene-AC00_RS22660;Name=AC00_RS22660;end_range=72839,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS22660;old_locus_tag=AC00_0205;partial=true NZ_JJLU01000007.1 cmsearch rRNA 71848 72839 . + . ID=rna-AC00_RS22660;Parent=gene-AC00_RS22660;Dbxref=RFAM:RF00177;end_range=72839,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS22660;partial=true;product=16S ribosomal RNA NZ_JJLU01000007.1 cmsearch exon 71848 72839 . + . ID=exon-AC00_RS22660-1;Parent=rna-AC00_RS22660;Dbxref=RFAM:RF00177;end_range=72839,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS22660;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLU01000008.1 1 3945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000008.1 RefSeq region 1 3945 . + . ID=NZ_JJLU01000008.1:1..3945;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000008.1 RefSeq gene 1 484 . + . ID=gene-AC00_RS0123695;Name=AC00_RS0123695;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS0123695;partial=true;start_range=.,1 NZ_JJLU01000008.1 cmsearch rRNA 1 484 . + . ID=rna-AC00_RS0123695;Parent=gene-AC00_RS0123695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0123695;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000008.1 cmsearch exon 1 484 . + . ID=exon-AC00_RS0123695-1;Parent=rna-AC00_RS0123695;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0123695;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000008.1 RefSeq gene 570 645 . + . ID=gene-AC00_RS22655;Name=AC00_RS22655;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS22655;old_locus_tag=AC00_0206 NZ_JJLU01000008.1 tRNAscan-SE tRNA 570 645 . + . ID=rna-AC00_RS22655;Parent=gene-AC00_RS22655;anticodon=(pos:604..606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS22655;product=tRNA-Glu NZ_JJLU01000008.1 tRNAscan-SE exon 570 645 . + . ID=exon-AC00_RS22655-1;Parent=rna-AC00_RS22655;anticodon=(pos:604..606);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS22655;product=tRNA-Glu NZ_JJLU01000008.1 RefSeq gene 839 3741 . + . ID=gene-AC00_RS22650;Name=AC00_RS22650;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS22650;old_locus_tag=AC00_0207 NZ_JJLU01000008.1 cmsearch rRNA 839 3741 . + . ID=rna-AC00_RS22650;Parent=gene-AC00_RS22650;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS22650;product=23S ribosomal RNA NZ_JJLU01000008.1 cmsearch exon 839 3741 . + . ID=exon-AC00_RS22650-1;Parent=rna-AC00_RS22650;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS22650;product=23S ribosomal RNA NZ_JJLU01000008.1 RefSeq gene 3836 3945 . + . ID=gene-AC00_RS22645;Name=rrf;end_range=3945,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS22645;old_locus_tag=AC00_0209;partial=true NZ_JJLU01000008.1 cmsearch rRNA 3836 3945 . + . ID=rna-AC00_RS22645;Parent=gene-AC00_RS22645;Dbxref=RFAM:RF00001;end_range=3945,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS22645;partial=true;product=5S ribosomal RNA NZ_JJLU01000008.1 cmsearch exon 3836 3945 . + . ID=exon-AC00_RS22645-1;Parent=rna-AC00_RS22645;Dbxref=RFAM:RF00001;end_range=3945,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS22645;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JJLU01000009.1 1 15222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000009.1 RefSeq region 1 15222 . + . ID=NZ_JJLU01000009.1:1..15222;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000009.1 RefSeq pseudogene 211 1015 . + . ID=gene-AC00_RS0123700;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=pseudogene;locus_tag=AC00_RS0123700;pseudo=true NZ_JJLU01000009.1 Protein Homology CDS 211 1015 . + 0 ID=cds-AC00_RS0123700;Parent=gene-AC00_RS0123700;Note=frameshifted;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AC00_RS0123700;product=2%2C5-didehydrogluconate reductase DkgB;pseudo=true;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 1012 1926 . - . ID=gene-AC00_RS22640;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=AC00_RS22640;old_locus_tag=AC00_0213 NZ_JJLU01000009.1 Protein Homology CDS 1012 1926 . - 0 ID=cds-WP_032280292.1;Parent=gene-AC00_RS22640;Dbxref=GenBank:WP_032280292.1;Name=WP_032280292.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308231.1;locus_tag=AC00_RS22640;product=DNA-binding transcriptional regulator YafC;protein_id=WP_032280292.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 2167 2967 . + . ID=gene-AC00_RS22635;Name=yafD;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=AC00_RS22635;old_locus_tag=AC00_0214 NZ_JJLU01000009.1 Protein Homology CDS 2167 2967 . + 0 ID=cds-WP_032280293.1;Parent=gene-AC00_RS22635;Dbxref=GenBank:WP_032280293.1;Name=WP_032280293.1;gbkey=CDS;gene=yafD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=AC00_RS22635;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_032280293.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 3045 3815 . + . ID=gene-AC00_RS22630;Name=AC00_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22630;old_locus_tag=AC00_0215 NZ_JJLU01000009.1 Protein Homology CDS 3045 3815 . + 0 ID=cds-WP_032280294.1;Parent=gene-AC00_RS22630;Dbxref=GenBank:WP_032280294.1;Name=WP_032280294.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308233.1;locus_tag=AC00_RS22630;product=class I SAM-dependent methyltransferase;protein_id=WP_032280294.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 3863 5221 . - . ID=gene-AC00_RS22625;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=AC00_RS22625;old_locus_tag=AC00_0216 NZ_JJLU01000009.1 Protein Homology CDS 3863 5221 . - 0 ID=cds-WP_032280295.1;Parent=gene-AC00_RS22625;Dbxref=GenBank:WP_032280295.1;Name=WP_032280295.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308234.1;locus_tag=AC00_RS22625;product=murein transglycosylase D;protein_id=WP_032280295.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 5293 6048 . - . ID=gene-AC00_RS22620;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=AC00_RS22620;old_locus_tag=AC00_0217 NZ_JJLU01000009.1 Protein Homology CDS 5293 6048 . - 0 ID=cds-WP_032280296.1;Parent=gene-AC00_RS22620;Dbxref=GenBank:WP_032280296.1;Name=WP_032280296.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308235.1;locus_tag=AC00_RS22620;product=hydroxyacylglutathione hydrolase;protein_id=WP_032280296.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 6082 6804 . + . ID=gene-AC00_RS22615;Name=yafS;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=AC00_RS22615;old_locus_tag=AC00_0218 NZ_JJLU01000009.1 Protein Homology CDS 6082 6804 . + 0 ID=cds-WP_001295200.1;Parent=gene-AC00_RS22615;Dbxref=GenBank:WP_001295200.1;Name=WP_001295200.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;gene=yafS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414749.2;locus_tag=AC00_RS22615;product=class I SAM-dependent methyltransferase;protein_id=WP_001295200.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 6801 7268 . - . ID=gene-AC00_RS22610;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AC00_RS22610;old_locus_tag=AC00_0219 NZ_JJLU01000009.1 Protein Homology CDS 6801 7268 . - 0 ID=cds-WP_000917883.1;Parent=gene-AC00_RS22610;Dbxref=GenBank:WP_000917883.1;Name=WP_000917883.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308237.1;locus_tag=AC00_RS22610;product=ribonuclease HI;protein_id=WP_000917883.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 7333 8064 . + . ID=gene-AC00_RS22605;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AC00_RS22605;old_locus_tag=AC00_0220 NZ_JJLU01000009.1 Protein Homology CDS 7333 8064 . + 0 ID=cds-WP_001366128.1;Parent=gene-AC00_RS22605;Dbxref=GenBank:WP_001366128.1;Name=WP_001366128.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706156.2;locus_tag=AC00_RS22605;product=DNA polymerase III subunit epsilon;protein_id=WP_001366128.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 8197 8273 . + . ID=gene-AC00_RS22600;Name=AC00_RS22600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS22600;old_locus_tag=AC00_0221 NZ_JJLU01000009.1 tRNAscan-SE tRNA 8197 8273 . + . ID=rna-AC00_RS22600;Parent=gene-AC00_RS22600;anticodon=(pos:8231..8233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS22600;product=tRNA-Asp NZ_JJLU01000009.1 tRNAscan-SE exon 8197 8273 . + . ID=exon-AC00_RS22600-1;Parent=rna-AC00_RS22600;anticodon=(pos:8231..8233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS22600;product=tRNA-Asp NZ_JJLU01000009.1 RefSeq gene 8405 9451 . - . ID=gene-AC00_RS22595;Name=AC00_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22595;old_locus_tag=AC00_0222 NZ_JJLU01000009.1 Protein Homology CDS 8405 9451 . - 0 ID=cds-WP_032280297.1;Parent=gene-AC00_RS22595;Dbxref=GenBank:WP_032280297.1;Name=WP_032280297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706157.1;locus_tag=AC00_RS22595;product=ImpA family type VI secretion system protein;protein_id=WP_032280297.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 9462 10457 . - . ID=gene-AC00_RS22590;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=AC00_RS22590;old_locus_tag=AC00_0223 NZ_JJLU01000009.1 Protein Homology CDS 9462 10457 . - 0 ID=cds-WP_032280298.1;Parent=gene-AC00_RS22590;Dbxref=GenBank:WP_032280298.1;Name=WP_032280298.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601590.1;locus_tag=AC00_RS22590;product=type VI secretion system baseplate subunit TssG;protein_id=WP_032280298.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 10454 12337 . - . ID=gene-AC00_RS22585;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=AC00_RS22585;old_locus_tag=AC00_0224 NZ_JJLU01000009.1 Protein Homology CDS 10454 12337 . - 0 ID=cds-WP_000371479.1;Parent=gene-AC00_RS22585;Dbxref=GenBank:WP_000371479.1;Name=WP_000371479.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706159.1;locus_tag=AC00_RS22585;product=type VI secretion system baseplate subunit TssF;protein_id=WP_000371479.1;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 12353 12847 . - . ID=gene-AC00_RS22580;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=AC00_RS22580;old_locus_tag=AC00_0225 NZ_JJLU01000009.1 Protein Homology CDS 12353 12847 . - 0 ID=cds-WP_032280300.1;Parent=gene-AC00_RS22580;Dbxref=GenBank:WP_032280300.1;Name=WP_032280300.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706160.2;locus_tag=AC00_RS22580;product=type VI secretion system baseplate subunit TssE;protein_id=WP_032280300.1;transl_table=11 NZ_JJLU01000009.1 RefSeq pseudogene 12844 13674 . - . ID=gene-AC00_RS22575;Name=AC00_RS22575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22575;old_locus_tag=AC00_0226;pseudo=true NZ_JJLU01000009.1 Protein Homology CDS 12844 13674 . - 0 ID=cds-AC00_RS22575;Parent=gene-AC00_RS22575;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750540.1;locus_tag=AC00_RS22575;product=type VI secretion system accessory protein TagJ;pseudo=true;transl_table=11 NZ_JJLU01000009.1 RefSeq pseudogene 13693 14426 . + . ID=gene-AC00_RS29215;Name=AC00_RS29215;end_range=14426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29215;partial=true;pseudo=true NZ_JJLU01000009.1 Protein Homology CDS 13693 14426 . + 0 ID=cds-AC00_RS29215;Parent=gene-AC00_RS29215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=14426,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AC00_RS29215;partial=true;product=IS3-like element ISEc31 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000009.1 RefSeq gene 15084 15222 . + . ID=gene-AC00_RS29220;Name=AC00_RS29220;end_range=15222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29220;old_locus_tag=AC00_0231;partial=true NZ_JJLU01000009.1 Protein Homology CDS 15084 15222 . + 0 ID=cds-WP_077757337.1;Parent=gene-AC00_RS29220;Dbxref=GenBank:WP_077757337.1;Name=WP_077757337.1;end_range=15222,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241516.1;locus_tag=AC00_RS29220;partial=true;product=reverse transcriptase;protein_id=WP_077757337.1;transl_table=11 ##sequence-region NZ_JJLU01000010.1 1 18143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000010.1 RefSeq region 1 18143 . + . ID=NZ_JJLU01000010.1:1..18143;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000010.1 RefSeq pseudogene 1 199 . + . ID=gene-AC00_RS26955;Name=AC00_RS26955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS26955;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000010.1 Protein Homology CDS 1 199 . + 1 ID=cds-AC00_RS26955;Parent=gene-AC00_RS26955;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488852.1;locus_tag=AC00_RS26955;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000010.1 RefSeq pseudogene 209 1591 . + . ID=gene-AC00_RS0123705;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=pseudogene;locus_tag=AC00_RS0123705;partial=true;pseudo=true;start_range=.,209 NZ_JJLU01000010.1 Protein Homology CDS 209 1591 . + 0 ID=cds-AC00_RS0123705;Parent=gene-AC00_RS0123705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC00_RS0123705;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;start_range=.,209;transl_table=11 NZ_JJLU01000010.1 RefSeq pseudogene 1672 2160 . + . ID=gene-AC00_RS26960;Name=AC00_RS26960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS26960;partial=true;pseudo=true;start_range=.,1672 NZ_JJLU01000010.1 Protein Homology CDS 1672 2160 . + 0 ID=cds-AC00_RS26960;Parent=gene-AC00_RS26960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612262.1;locus_tag=AC00_RS26960;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1672;transl_table=11 NZ_JJLU01000010.1 RefSeq pseudogene 2167 2448 . - . ID=gene-AC00_RS26965;Name=AC00_RS26965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS26965;partial=true;pseudo=true;start_range=.,2167 NZ_JJLU01000010.1 Protein Homology CDS 2167 2448 . - 0 ID=cds-AC00_RS26965;Parent=gene-AC00_RS26965;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246270.1;locus_tag=AC00_RS26965;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2167;transl_table=11 NZ_JJLU01000010.1 RefSeq pseudogene 2572 2976 . + . ID=gene-AC00_RS31100;Name=AC00_RS31100;end_range=2976,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31100;old_locus_tag=AC00_0236;partial=true;pseudo=true;start_range=.,2572 NZ_JJLU01000010.1 Protein Homology CDS 2572 2976 . + 0 ID=cds-AC00_RS31100;Parent=gene-AC00_RS31100;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2976,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459289.1;locus_tag=AC00_RS31100;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,2572;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 3415 3678 . + . ID=gene-AC00_RS22560;Name=AC00_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22560;old_locus_tag=AC00_0238 NZ_JJLU01000010.1 Protein Homology CDS 3415 3678 . + 0 ID=cds-WP_032280303.1;Parent=gene-AC00_RS22560;Dbxref=GenBank:WP_032280303.1;Name=WP_032280303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001026260.1;locus_tag=AC00_RS22560;product=hypothetical protein;protein_id=WP_032280303.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 3723 3983 . - . ID=gene-AC00_RS22555;Name=AC00_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22555;old_locus_tag=AC00_0239 NZ_JJLU01000010.1 Protein Homology CDS 3723 3983 . - 0 ID=cds-WP_207184268.1;Parent=gene-AC00_RS22555;Dbxref=GenBank:WP_207184268.1;Name=WP_207184268.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000541011.1;locus_tag=AC00_RS22555;product=SymE family type I addiction module toxin;protein_id=WP_207184268.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 4070 4840 . - . ID=gene-AC00_RS22550;Name=yafV;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=AC00_RS22550;old_locus_tag=AC00_0240 NZ_JJLU01000010.1 Protein Homology CDS 4070 4840 . - 0 ID=cds-WP_001118041.1;Parent=gene-AC00_RS22550;Dbxref=GenBank:WP_001118041.1;Name=WP_001118041.1;gbkey=CDS;gene=yafV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414754.1;locus_tag=AC00_RS22550;product=2-oxoglutaramate amidase;protein_id=WP_001118041.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 5021 5467 . + . ID=gene-AC00_RS22545;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=AC00_RS22545;old_locus_tag=AC00_0241 NZ_JJLU01000010.1 Protein Homology CDS 5021 5467 . + 0 ID=cds-WP_001308392.1;Parent=gene-AC00_RS22545;Dbxref=GenBank:WP_001308392.1;Name=WP_001308392.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308274.2;locus_tag=AC00_RS22545;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_001308392.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 5510 7954 . - . ID=gene-AC00_RS22540;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=AC00_RS22540;old_locus_tag=AC00_0242 NZ_JJLU01000010.1 Protein Homology CDS 5510 7954 . - 0 ID=cds-WP_032280305.1;Parent=gene-AC00_RS22540;Dbxref=GenBank:WP_032280305.1;Name=WP_032280305.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414756.2;locus_tag=AC00_RS22540;product=acyl-CoA dehydrogenase FadE;protein_id=WP_032280305.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 8194 8772 . + . ID=gene-AC00_RS22535;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=AC00_RS22535;old_locus_tag=AC00_0243 NZ_JJLU01000010.1 Protein Homology CDS 8194 8772 . + 0 ID=cds-WP_032280306.1;Parent=gene-AC00_RS22535;Dbxref=GenBank:WP_032280306.1;Name=WP_032280306.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=AC00_RS22535;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_032280306.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 8978 9745 . + . ID=gene-AC00_RS22530;Name=yafJ;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=AC00_RS22530;old_locus_tag=AC00_0244 NZ_JJLU01000010.1 Protein Homology CDS 8978 9745 . + 0 ID=cds-WP_000333380.1;Parent=gene-AC00_RS22530;Dbxref=GenBank:WP_000333380.1;Name=WP_000333380.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;gene=yafJ;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=AC00_RS22530;product=class II glutamine amidotransferase;protein_id=WP_000333380.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 9716 10456 . - . ID=gene-AC00_RS22525;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=AC00_RS22525;old_locus_tag=AC00_0245 NZ_JJLU01000010.1 Protein Homology CDS 9716 10456 . - 0 ID=cds-WP_032280307.1;Parent=gene-AC00_RS22525;Dbxref=GenBank:WP_032280307.1;Name=WP_032280307.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308278.1;locus_tag=AC00_RS22525;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_032280307.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 10612 10890 . - . ID=gene-AC00_RS22520;Name=yafQ;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=AC00_RS22520;old_locus_tag=AC00_0246 NZ_JJLU01000010.1 Protein Homology CDS 10612 10890 . - 0 ID=cds-WP_000615979.1;Parent=gene-AC00_RS22520;Dbxref=GenBank:WP_000615979.1;Name=WP_000615979.1;gbkey=CDS;gene=yafQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414760.1;locus_tag=AC00_RS22520;product=type II toxin-antitoxin system mRNA interferase toxin YafQ;protein_id=WP_000615979.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 10893 11153 . - . ID=gene-AC00_RS22515;Name=dinJ;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=AC00_RS22515;old_locus_tag=AC00_0247 NZ_JJLU01000010.1 Protein Homology CDS 10893 11153 . - 0 ID=cds-WP_000729704.1;Parent=gene-AC00_RS22515;Dbxref=GenBank:WP_000729704.1;Name=WP_000729704.1;gbkey=CDS;gene=dinJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308280.1;locus_tag=AC00_RS22515;product=type II toxin-antitoxin system antitoxin DinJ;protein_id=WP_000729704.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 11363 12112 . + . ID=gene-AC00_RS22510;Name=yafL;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=AC00_RS22510;old_locus_tag=AC00_0248 NZ_JJLU01000010.1 Protein Homology CDS 11363 12112 . + 0 ID=cds-WP_032280313.1;Parent=gene-AC00_RS22510;Dbxref=GenBank:WP_032280313.1;Name=WP_032280313.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;gene=yafL;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414762.1;locus_tag=AC00_RS22510;product=C40 family peptidase;protein_id=WP_032280313.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 12288 12785 . + . ID=gene-AC00_RS22505;Name=rayT;gbkey=Gene;gene=rayT;gene_biotype=protein_coding;locus_tag=AC00_RS22505;old_locus_tag=AC00_0249 NZ_JJLU01000010.1 Protein Homology CDS 12288 12785 . + 0 ID=cds-WP_032280308.1;Parent=gene-AC00_RS22505;Dbxref=GenBank:WP_032280308.1;Name=WP_032280308.1;gbkey=CDS;gene=rayT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706228.1;locus_tag=AC00_RS22505;product=REP-associated tyrosine transposase;protein_id=WP_032280308.1;transl_table=11 NZ_JJLU01000010.1 RefSeq pseudogene 12917 14635 . - . ID=gene-AC00_RS0123725;Name=AC00_RS0123725;end_range=14635,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123725;old_locus_tag=AC00_0250;partial=true;pseudo=true NZ_JJLU01000010.1 Protein Homology CDS 12917 14635 . - 0 ID=cds-AC00_RS0123725;Parent=gene-AC00_RS0123725;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009306,GO:0044780,GO:0071978;end_range=14635,.;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001140831.1;locus_tag=AC00_RS0123725;partial=true;product=flagellar biosynthesis protein FlhA;pseudo=true;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 14601 15386 . + . ID=gene-AC00_RS22500;Name=lafU;gbkey=Gene;gene=lafU;gene_biotype=protein_coding;locus_tag=AC00_RS22500;old_locus_tag=AC00_0252 NZ_JJLU01000010.1 Protein Homology CDS 14601 15386 . + 0 ID=cds-WP_162721673.1;Parent=gene-AC00_RS22500;Dbxref=GenBank:WP_162721673.1;Name=WP_162721673.1;gbkey=CDS;gene=lafU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706230.2;locus_tag=AC00_RS22500;product=putative lateral flagellar export/assembly protein LafU;protein_id=WP_162721673.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 15457 16512 . + . ID=gene-AC00_RS22495;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=AC00_RS22495;old_locus_tag=AC00_0253 NZ_JJLU01000010.1 Protein Homology CDS 15457 16512 . + 0 ID=cds-WP_032288144.1;Parent=gene-AC00_RS22495;Dbxref=GenBank:WP_032288144.1;Name=WP_032288144.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=AC00_RS22495;product=DNA polymerase IV;protein_id=WP_032288144.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 16564 16857 . + . ID=gene-AC00_RS22490;Name=yafN;gbkey=Gene;gene=yafN;gene_biotype=protein_coding;locus_tag=AC00_RS22490;old_locus_tag=AC00_0254 NZ_JJLU01000010.1 Protein Homology CDS 16564 16857 . + 0 ID=cds-WP_000554758.1;Parent=gene-AC00_RS22490;Dbxref=GenBank:WP_000554758.1;Name=WP_000554758.1;gbkey=CDS;gene=yafN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414767.1;locus_tag=AC00_RS22490;product=type I toxin-antitoxin system antitoxin YafN;protein_id=WP_000554758.1;transl_table=11 NZ_JJLU01000010.1 RefSeq gene 16860 17258 . + . ID=gene-AC00_RS22485;Name=yafO;gbkey=Gene;gene=yafO;gene_biotype=protein_coding;locus_tag=AC00_RS22485;old_locus_tag=AC00_0255 NZ_JJLU01000010.1 Protein Homology CDS 16860 17258 . + 0 ID=cds-WP_032280310.1;Parent=gene-AC00_RS22485;Dbxref=GenBank:WP_032280310.1;Name=WP_032280310.1;gbkey=CDS;gene=yafO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308287.1;locus_tag=AC00_RS22485;product=type II toxin-antitoxin system mRNA interferase toxin YafO;protein_id=WP_032280310.1;transl_table=11 NZ_JJLU01000010.1 RefSeq pseudogene 17268 17525 . + . ID=gene-AC00_RS22480;Name=AC00_RS22480;end_range=17525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22480;old_locus_tag=AC00_0256;partial=true;pseudo=true NZ_JJLU01000010.1 Protein Homology CDS 17268 17525 . + 0 ID=cds-AC00_RS22480;Parent=gene-AC00_RS22480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17525,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414769.1;locus_tag=AC00_RS22480;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_JJLU01000010.1 RefSeq pseudogene 17581 18143 . + . ID=gene-AC00_RS22475;Name=AC00_RS22475;end_range=18143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22475;old_locus_tag=AC00_0257;partial=true;pseudo=true NZ_JJLU01000010.1 Protein Homology CDS 17581 18143 . + 0 ID=cds-AC00_RS22475;Parent=gene-AC00_RS22475;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=18143,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS22475;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000011.1 1 10512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000011.1 RefSeq region 1 10512 . + . ID=NZ_JJLU01000011.1:1..10512;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000011.1 RefSeq gene 1 662 . + . ID=gene-AC00_RS0123735;Name=AC00_RS0123735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123735;old_locus_tag=AC00_0258;partial=true;start_range=.,1 NZ_JJLU01000011.1 Protein Homology CDS 1 214 . + 0 ID=cds-WP_231248335.1;Parent=gene-AC00_RS0123735;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0123735;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;start_range=.,1;transl_table=11 NZ_JJLU01000011.1 Protein Homology CDS 214 662 . + 2 ID=cds-WP_231248335.1;Parent=gene-AC00_RS0123735;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0123735;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;transl_table=11 NZ_JJLU01000011.1 RefSeq pseudogene 814 1022 . + . ID=gene-AC00_RS30165;Name=AC00_RS30165;end_range=1022,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30165;partial=true;pseudo=true NZ_JJLU01000011.1 Protein Homology CDS 814 1022 . + 0 ID=cds-AC00_RS30165;Parent=gene-AC00_RS30165;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706235.2;locus_tag=AC00_RS30165;partial=true;product=RtcB family protein;pseudo=true;transl_table=11 NZ_JJLU01000011.1 RefSeq pseudogene 1069 1350 . + . ID=gene-AC00_RS22470;Name=AC00_RS22470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22470;old_locus_tag=AC00_0259;partial=true;pseudo=true;start_range=.,1069 NZ_JJLU01000011.1 Protein Homology CDS 1069 1350 . + 0 ID=cds-AC00_RS22470;Parent=gene-AC00_RS22470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000602105.1;locus_tag=AC00_RS22470;partial=true;product=peptide chain release factor-like protein;pseudo=true;start_range=.,1069;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 1407 2864 . - . ID=gene-AC00_RS22465;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=AC00_RS22465;old_locus_tag=AC00_0260 NZ_JJLU01000011.1 Protein Homology CDS 1407 2864 . - 0 ID=cds-WP_001293010.1;Parent=gene-AC00_RS22465;Dbxref=GenBank:WP_001293010.1;Name=WP_001293010.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308291.1;locus_tag=AC00_RS22465;product=cytosol nonspecific dipeptidase;protein_id=WP_001293010.1;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 3125 3583 . + . ID=gene-AC00_RS22460;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=AC00_RS22460;old_locus_tag=AC00_0261 NZ_JJLU01000011.1 Protein Homology CDS 3125 3583 . + 0 ID=cds-WP_001291990.1;Parent=gene-AC00_RS22460;Dbxref=GenBank:WP_001291990.1;Name=WP_001291990.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308292.1;locus_tag=AC00_RS22460;product=xanthine phosphoribosyltransferase;protein_id=WP_001291990.1;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 3675 4919 . + . ID=gene-AC00_RS22455;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=AC00_RS22455;old_locus_tag=AC00_0262 NZ_JJLU01000011.1 Protein Homology CDS 3675 4919 . + 0 ID=cds-WP_000189542.1;Parent=gene-AC00_RS22455;Dbxref=GenBank:WP_000189542.1;Name=WP_000189542.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414774.1;locus_tag=AC00_RS22455;product=esterase FrsA;protein_id=WP_000189542.1;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 4977 5378 . + . ID=gene-AC00_RS22450;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=AC00_RS22450;old_locus_tag=AC00_0263 NZ_JJLU01000011.1 Protein Homology CDS 4977 5378 . + 0 ID=cds-WP_000174677.1;Parent=gene-AC00_RS22450;Dbxref=GenBank:WP_000174677.1;Name=WP_000174677.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308294.1;locus_tag=AC00_RS22450;product=sigma factor-binding protein Crl;protein_id=WP_000174677.1;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 5417 6472 . - . ID=gene-AC00_RS22445;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=AC00_RS22445;old_locus_tag=AC00_0264 NZ_JJLU01000011.1 Protein Homology CDS 5417 6472 . - 0 ID=cds-WP_000749881.1;Parent=gene-AC00_RS22445;Dbxref=GenBank:WP_000749881.1;Name=WP_000749881.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308295.1;locus_tag=AC00_RS22445;product=phosphoporin PhoE;protein_id=WP_000749881.1;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 6760 7863 . + . ID=gene-AC00_RS22440;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=AC00_RS22440;old_locus_tag=AC00_0265 NZ_JJLU01000011.1 Protein Homology CDS 6760 7863 . + 0 ID=cds-WP_001285288.1;Parent=gene-AC00_RS22440;Dbxref=GenBank:WP_001285288.1;Name=WP_001285288.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=AC00_RS22440;product=glutamate 5-kinase;protein_id=WP_001285288.1;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 7875 9128 . + . ID=gene-AC00_RS22435;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=AC00_RS22435;old_locus_tag=AC00_0266 NZ_JJLU01000011.1 Protein Homology CDS 7875 9128 . + 0 ID=cds-WP_032280317.1;Parent=gene-AC00_RS22435;Dbxref=GenBank:WP_032280317.1;Name=WP_032280317.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706245.1;locus_tag=AC00_RS22435;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_032280317.1;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 9243 9318 . + . ID=gene-AC00_RS22430;Name=AC00_RS22430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS22430;old_locus_tag=AC00_0267 NZ_JJLU01000011.1 tRNAscan-SE tRNA 9243 9318 . + . ID=rna-AC00_RS22430;Parent=gene-AC00_RS22430;anticodon=(pos:9276..9278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS22430;product=tRNA-Thr NZ_JJLU01000011.1 tRNAscan-SE exon 9243 9318 . + . ID=exon-AC00_RS22430-1;Parent=rna-AC00_RS22430;anticodon=(pos:9276..9278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS22430;product=tRNA-Thr NZ_JJLU01000011.1 RefSeq pseudogene 9333 10166 . - . ID=gene-AC00_RS22425;Name=AC00_RS22425;end_range=10166,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22425;old_locus_tag=AC00_0268;partial=true;pseudo=true NZ_JJLU01000011.1 Protein Homology CDS 9333 10166 . - 0 ID=cds-AC00_RS22425;Parent=gene-AC00_RS22425;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=10166,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011579066.1;locus_tag=AC00_RS22425;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_JJLU01000011.1 RefSeq gene 10260 10512 . + . ID=gene-AC00_RS22420;Name=AC00_RS22420;end_range=10512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22420;old_locus_tag=AC00_0269;partial=true NZ_JJLU01000011.1 Protein Homology CDS 10260 10512 . + 0 ID=cds-WP_000567711.1;Parent=gene-AC00_RS22420;Dbxref=GenBank:WP_000567711.1;Name=WP_000567711.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=10512,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AC00_RS22420;partial=true;product=transposase;protein_id=WP_000567711.1;transl_table=11 ##sequence-region NZ_JJLU01000012.1 1 33606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000012.1 RefSeq region 1 33606 . + . ID=NZ_JJLU01000012.1:1..33606;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000012.1 RefSeq gene 1 502 . + . ID=gene-AC00_RS22415;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC00_RS22415;old_locus_tag=AC00_0270;partial=true;start_range=.,1 NZ_JJLU01000012.1 Protein Homology CDS 1 502 . + 1 ID=cds-WP_032288147.1;Parent=gene-AC00_RS22415;Dbxref=GenBank:WP_032288147.1;Name=WP_032288147.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311873.1;locus_tag=AC00_RS22415;partial=true;product=IS66-like element accessory protein TnpA;protein_id=WP_032288147.1;start_range=.,1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 553 846 . + . ID=gene-AC00_RS22410;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC00_RS22410;old_locus_tag=AC00_0271 NZ_JJLU01000012.1 Protein Homology CDS 553 846 . + 0 ID=cds-WP_032288148.1;Parent=gene-AC00_RS22410;Dbxref=GenBank:WP_032288148.1;Name=WP_032288148.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC00_RS22410;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032288148.1;transl_table=11 NZ_JJLU01000012.1 RefSeq pseudogene 866 2467 . + . ID=gene-AC00_RS22400;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=AC00_RS22400;old_locus_tag=AC00_0273;pseudo=true NZ_JJLU01000012.1 Protein Homology CDS 866 2467 . + 0 ID=cds-AC00_RS22400;Parent=gene-AC00_RS22400;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611684.1;locus_tag=AC00_RS22400;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000012.1 RefSeq pseudogene 2524 3492 . + . ID=gene-AC00_RS0123745;Name=AC00_RS0123745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123745;old_locus_tag=AC00_0275;partial=true;pseudo=true;start_range=.,2524 NZ_JJLU01000012.1 Protein Homology CDS 2524 3492 . + 0 ID=cds-AC00_RS0123745;Parent=gene-AC00_RS0123745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=AC00_RS0123745;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,2524;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 3686 4990 . - . ID=gene-AC00_RS22395;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=AC00_RS22395;old_locus_tag=AC00_0276 NZ_JJLU01000012.1 Protein Homology CDS 3686 4990 . - 0 ID=cds-WP_000703045.1;Parent=gene-AC00_RS22395;Dbxref=GenBank:WP_000703045.1;Name=WP_000703045.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=AC00_RS22395;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_000703045.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 5018 6298 . - . ID=gene-AC00_RS22390;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=AC00_RS22390;old_locus_tag=AC00_0277 NZ_JJLU01000012.1 Protein Homology CDS 5018 6298 . - 0 ID=cds-WP_001286281.1;Parent=gene-AC00_RS22390;Dbxref=GenBank:WP_001286281.1;Name=WP_001286281.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=AC00_RS22390;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_001286281.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 6291 8093 . - . ID=gene-AC00_RS22385;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=AC00_RS22385;old_locus_tag=AC00_0278 NZ_JJLU01000012.1 Protein Homology CDS 6291 8093 . - 0 ID=cds-WP_032234868.1;Parent=gene-AC00_RS22385;Dbxref=GenBank:WP_032234868.1;Name=WP_032234868.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=AC00_RS22385;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_032234868.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 8080 9792 . - . ID=gene-AC00_RS22380;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=AC00_RS22380;old_locus_tag=AC00_0279 NZ_JJLU01000012.1 Protein Homology CDS 8080 9792 . - 0 ID=cds-WP_032237909.1;Parent=gene-AC00_RS22380;Dbxref=GenBank:WP_032237909.1;Name=WP_032237909.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=AC00_RS22380;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_032237909.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 10049 11008 . + . ID=gene-AC00_RS22375;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=AC00_RS22375;old_locus_tag=AC00_0280 NZ_JJLU01000012.1 Protein Homology CDS 10049 11008 . + 0 ID=cds-WP_032234865.1;Parent=gene-AC00_RS22375;Dbxref=GenBank:WP_032234865.1;Name=WP_032234865.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=AC00_RS22375;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_032234865.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 11199 17306 . + . ID=gene-AC00_RS22370;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=AC00_RS22370;old_locus_tag=AC00_0281 NZ_JJLU01000012.1 Protein Homology CDS 11199 17306 . + 0 ID=cds-WP_032282355.1;Parent=gene-AC00_RS22370;Dbxref=GenBank:WP_032282355.1;Name=WP_032282355.1;Ontology_term=GO:1904091;gbkey=CDS;gene=irp2;go_function=non-ribosomal peptide synthetase activity|1904091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=AC00_RS22370;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_032282355.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 17394 26885 . + . ID=gene-AC00_RS22365;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=AC00_RS22365;old_locus_tag=AC00_0282 NZ_JJLU01000012.1 Protein Homology CDS 17394 26885 . + 0 ID=cds-WP_032250152.1;Parent=gene-AC00_RS22365;Dbxref=GenBank:WP_032250152.1;Name=WP_032250152.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=AC00_RS22365;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_032250152.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 26882 27982 . + . ID=gene-AC00_RS22360;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=AC00_RS22360;old_locus_tag=AC00_0283 NZ_JJLU01000012.1 Protein Homology CDS 26882 27982 . + 0 ID=cds-WP_000982866.1;Parent=gene-AC00_RS22360;Dbxref=GenBank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=AC00_RS22360;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982866.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 27979 28782 . + . ID=gene-AC00_RS22355;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=AC00_RS22355;old_locus_tag=AC00_0284 NZ_JJLU01000012.1 Protein Homology CDS 27979 28782 . + 0 ID=cds-WP_000194286.1;Parent=gene-AC00_RS22355;Dbxref=GenBank:WP_000194286.1;Name=WP_000194286.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=AC00_RS22355;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_000194286.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 28786 30363 . + . ID=gene-AC00_RS22350;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=AC00_RS22350;old_locus_tag=AC00_0285 NZ_JJLU01000012.1 Protein Homology CDS 28786 30363 . + 0 ID=cds-WP_001088826.1;Parent=gene-AC00_RS22350;Dbxref=GenBank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=AC00_RS22350;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088826.1;transl_table=11 NZ_JJLU01000012.1 RefSeq gene 30494 32515 . + . ID=gene-AC00_RS22345;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=AC00_RS22345;old_locus_tag=AC00_0286 NZ_JJLU01000012.1 Protein Homology CDS 30494 32515 . + 0 ID=cds-WP_032250153.1;Parent=gene-AC00_RS22345;Dbxref=GenBank:WP_032250153.1;Name=WP_032250153.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=AC00_RS22345;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_032250153.1;transl_table=11 NZ_JJLU01000012.1 RefSeq pseudogene 33239 33606 . - . ID=gene-AC00_RS0123750;Name=AC00_RS0123750;end_range=33606,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123750;old_locus_tag=AC00_0287;partial=true;pseudo=true NZ_JJLU01000012.1 Protein Homology CDS 33239 33606 . - 2 ID=cds-AC00_RS0123750;Parent=gene-AC00_RS0123750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=33606,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123750;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000013.1 1 33142 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000013.1 RefSeq region 1 33142 . + . ID=NZ_JJLU01000013.1:1..33142;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000013.1 RefSeq gene 1 262 . + . ID=gene-AC00_RS22340;Name=AC00_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22340;old_locus_tag=AC00_0288;partial=true;start_range=.,1 NZ_JJLU01000013.1 Protein Homology CDS 1 262 . + 1 ID=cds-WP_000317723.1;Parent=gene-AC00_RS22340;Dbxref=GenBank:WP_000317723.1;Name=WP_000317723.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS22340;partial=true;product=IS1 family transposase;protein_id=WP_000317723.1;start_range=.,1;transl_table=11 NZ_JJLU01000013.1 RefSeq pseudogene 573 798 . + . ID=gene-AC00_RS29225;Name=ykgL;gbkey=Gene;gene=ykgL;gene_biotype=pseudogene;locus_tag=AC00_RS29225;pseudo=true NZ_JJLU01000013.1 Protein Homology CDS 573 798 . + 0 ID=cds-AC00_RS29225;Parent=gene-AC00_RS29225;Note=frameshifted;gbkey=CDS;gene=ykgL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414829.1;locus_tag=AC00_RS29225;product=protein YkgL;pseudo=true;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 833 973 . - . ID=gene-AC00_RS22335;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=AC00_RS22335;old_locus_tag=AC00_0289 NZ_JJLU01000013.1 Protein Homology CDS 833 973 . - 0 ID=cds-WP_000866436.1;Parent=gene-AC00_RS22335;Dbxref=GenBank:WP_000866436.1;Name=WP_000866436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588437.1;locus_tag=AC00_RS22335;product=type B 50S ribosomal protein L36;protein_id=WP_000866436.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 973 1203 . - . ID=gene-AC00_RS22330;Name=AC00_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22330;old_locus_tag=AC00_0290 NZ_JJLU01000013.1 Protein Homology CDS 973 1203 . - 0 ID=cds-WP_001391041.1;Parent=gene-AC00_RS22330;Dbxref=GenBank:WP_001391041.1;Name=WP_001391041.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000812362.1;locus_tag=AC00_RS22330;product=type B 50S ribosomal protein L31;protein_id=WP_001391041.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 1600 1701 . - . ID=gene-AC00_RS31610;Name=ykgR;gbkey=Gene;gene=ykgR;gene_biotype=protein_coding;locus_tag=AC00_RS31610 NZ_JJLU01000013.1 Protein Homology CDS 1600 1701 . - 0 ID=cds-WP_000662258.1;Parent=gene-AC00_RS31610;Dbxref=GenBank:WP_000662258.1;Name=WP_000662258.1;gbkey=CDS;gene=ykgR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791238.1;locus_tag=AC00_RS31610;product=small membrane protein YkgR;protein_id=WP_000662258.1;transl_table=11 NZ_JJLU01000013.1 RefSeq pseudogene 2175 3318 . - . ID=gene-AC00_RS22325;Name=AC00_RS22325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22325;old_locus_tag=AC00_0291;pseudo=true NZ_JJLU01000013.1 Protein Homology CDS 2175 3318 . - 0 ID=cds-AC00_RS22325;Parent=gene-AC00_RS22325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308358.1;locus_tag=AC00_RS22325;product=NADH-dependent flavin oxidoreductase;pseudo=true;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 3554 4474 . - . ID=gene-AC00_RS22320;Name=AC00_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22320;old_locus_tag=AC00_0292 NZ_JJLU01000013.1 Protein Homology CDS 3554 4474 . - 0 ID=cds-WP_032280324.1;Parent=gene-AC00_RS22320;Dbxref=GenBank:WP_032280324.1;Name=WP_032280324.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308359.1;locus_tag=AC00_RS22320;product=alpha/beta hydrolase;protein_id=WP_032280324.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 4631 5557 . + . ID=gene-AC00_RS22315;Name=AC00_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22315;old_locus_tag=AC00_0293 NZ_JJLU01000013.1 Protein Homology CDS 4631 5557 . + 0 ID=cds-WP_032280325.1;Parent=gene-AC00_RS22315;Dbxref=GenBank:WP_032280325.1;Name=WP_032280325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308360.1;locus_tag=AC00_RS22315;product=LysR family transcriptional regulator;protein_id=WP_032280325.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 5758 6651 . + . ID=gene-AC00_RS22310;Name=AC00_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22310;old_locus_tag=AC00_0294 NZ_JJLU01000013.1 Protein Homology CDS 5758 6651 . + 0 ID=cds-WP_032280326.1;Parent=gene-AC00_RS22310;Dbxref=GenBank:WP_032280326.1;Name=WP_032280326.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234625.1;locus_tag=AC00_RS22310;product=LysR family transcriptional regulator;protein_id=WP_032280326.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 6683 7672 . - . ID=gene-AC00_RS22305;Name=AC00_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22305;old_locus_tag=AC00_0295 NZ_JJLU01000013.1 Protein Homology CDS 6683 7672 . - 0 ID=cds-WP_032280327.1;Parent=gene-AC00_RS22305;Dbxref=GenBank:WP_032280327.1;Name=WP_032280327.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001172283.1;locus_tag=AC00_RS22305;product=aldo/keto reductase;protein_id=WP_032280327.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 7699 8550 . - . ID=gene-AC00_RS22300;Name=AC00_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22300;old_locus_tag=AC00_0296 NZ_JJLU01000013.1 Protein Homology CDS 7699 8550 . - 0 ID=cds-WP_032280328.1;Parent=gene-AC00_RS22300;Dbxref=GenBank:WP_032280328.1;Name=WP_032280328.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195265.1;locus_tag=AC00_RS22300;product=aldo/keto reductase;protein_id=WP_032280328.1;transl_table=11 NZ_JJLU01000013.1 RefSeq pseudogene 9116 13368 . + . ID=gene-AC00_RS0123760;Name=fdeC;gbkey=Gene;gene=fdeC;gene_biotype=pseudogene;locus_tag=AC00_RS0123760;pseudo=true NZ_JJLU01000013.1 Protein Homology CDS 9116 13368 . + 0 ID=cds-AC00_RS0123760;Parent=gene-AC00_RS0123760;Note=frameshifted;gbkey=CDS;gene=fdeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001635811.1;locus_tag=AC00_RS0123760;product=inverse autotransporter adhesin FdeC;pseudo=true;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 13508 14359 . - . ID=gene-AC00_RS22295;Name=AC00_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22295;old_locus_tag=AC00_0300 NZ_JJLU01000013.1 Protein Homology CDS 13508 14359 . - 0 ID=cds-WP_032280329.1;Parent=gene-AC00_RS22295;Dbxref=GenBank:WP_032280329.1;Name=WP_032280329.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308364.2;locus_tag=AC00_RS22295;product=helix-turn-helix domain-containing protein;protein_id=WP_032280329.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 14607 15476 . + . ID=gene-AC00_RS22290;Name=AC00_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22290;old_locus_tag=AC00_0301 NZ_JJLU01000013.1 Protein Homology CDS 14607 15476 . + 0 ID=cds-WP_021556518.1;Parent=gene-AC00_RS22290;Dbxref=GenBank:WP_021556518.1;Name=WP_021556518.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308365.3;locus_tag=AC00_RS22290;product=aldo/keto reductase;protein_id=WP_021556518.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 15636 16229 . - . ID=gene-AC00_RS22285;Name=rclC;gbkey=Gene;gene=rclC;gene_biotype=protein_coding;locus_tag=AC00_RS22285;old_locus_tag=AC00_0302 NZ_JJLU01000013.1 Protein Homology CDS 15636 16229 . - 0 ID=cds-WP_001306921.1;Parent=gene-AC00_RS22285;Dbxref=GenBank:WP_001306921.1;Name=WP_001306921.1;gbkey=CDS;gene=rclC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414835.2;locus_tag=AC00_RS22285;product=reactive chlorine species resistance protein RclC;protein_id=WP_001306921.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 16241 16477 . - . ID=gene-AC00_RS22280;Name=rclB;gbkey=Gene;gene=rclB;gene_biotype=protein_coding;locus_tag=AC00_RS22280;old_locus_tag=AC00_0303 NZ_JJLU01000013.1 Protein Homology CDS 16241 16477 . - 0 ID=cds-WP_032280330.1;Parent=gene-AC00_RS22280;Dbxref=GenBank:WP_032280330.1;Name=WP_032280330.1;gbkey=CDS;gene=rclB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414837.2;locus_tag=AC00_RS22280;product=reactive chlorine resistance periplasmic protein RclB;protein_id=WP_032280330.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 16586 17911 . - . ID=gene-AC00_RS22275;Name=rclA;gbkey=Gene;gene=rclA;gene_biotype=protein_coding;locus_tag=AC00_RS22275;old_locus_tag=AC00_0304 NZ_JJLU01000013.1 Protein Homology CDS 16586 17911 . - 0 ID=cds-WP_032280331.1;Parent=gene-AC00_RS22275;Dbxref=GenBank:WP_032280331.1;Name=WP_032280331.1;gbkey=CDS;gene=rclA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308369.2;locus_tag=AC00_RS22275;product=reactive chlorine resistance oxidoreductase RclA;protein_id=WP_032280331.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 18137 18991 . + . ID=gene-AC00_RS22270;Name=rclR;gbkey=Gene;gene=rclR;gene_biotype=protein_coding;locus_tag=AC00_RS22270;old_locus_tag=AC00_0305 NZ_JJLU01000013.1 Protein Homology CDS 18137 18991 . + 0 ID=cds-WP_000339593.1;Parent=gene-AC00_RS22270;Dbxref=GenBank:WP_000339593.1;Name=WP_000339593.1;gbkey=CDS;gene=rclR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308370.1;locus_tag=AC00_RS22270;product=reactive chlorine-specific transcriptional regulator RclR;protein_id=WP_000339593.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 19519 20238 . + . ID=gene-AC00_RS22265;Name=ykgE;gbkey=Gene;gene=ykgE;gene_biotype=protein_coding;locus_tag=AC00_RS22265;old_locus_tag=AC00_0307 NZ_JJLU01000013.1 Protein Homology CDS 19519 20238 . + 0 ID=cds-WP_001102100.1;Parent=gene-AC00_RS22265;Dbxref=GenBank:WP_001102100.1;Name=WP_001102100.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;gene=ykgE;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414840.1;locus_tag=AC00_RS22265;product=(Fe-S)-binding protein;protein_id=WP_001102100.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 20249 21676 . + . ID=gene-AC00_RS22260;Name=ykgF;gbkey=Gene;gene=ykgF;gene_biotype=protein_coding;locus_tag=AC00_RS22260;old_locus_tag=AC00_0308 NZ_JJLU01000013.1 Protein Homology CDS 20249 21676 . + 0 ID=cds-WP_032280332.1;Parent=gene-AC00_RS22260;Dbxref=GenBank:WP_032280332.1;Name=WP_032280332.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;gene=ykgF;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308372.1;locus_tag=AC00_RS22260;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_032280332.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 21669 22364 . + . ID=gene-AC00_RS22255;Name=ykgG;gbkey=Gene;gene=ykgG;gene_biotype=protein_coding;locus_tag=AC00_RS22255;old_locus_tag=AC00_0309 NZ_JJLU01000013.1 Protein Homology CDS 21669 22364 . + 0 ID=cds-WP_032280333.1;Parent=gene-AC00_RS22255;Dbxref=GenBank:WP_032280333.1;Name=WP_032280333.1;Ontology_term=GO:0006089;gbkey=CDS;gene=ykgG;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414842.4;locus_tag=AC00_RS22255;product=LutC/YkgG family protein;protein_id=WP_032280333.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 22606 23274 . - . ID=gene-AC00_RS22250;Name=ykgH;gbkey=Gene;gene=ykgH;gene_biotype=protein_coding;locus_tag=AC00_RS22250;old_locus_tag=AC00_0310 NZ_JJLU01000013.1 Protein Homology CDS 22606 23274 . - 0 ID=cds-WP_001624663.1;Parent=gene-AC00_RS22250;Dbxref=GenBank:WP_001624663.1;Name=WP_001624663.1;gbkey=CDS;gene=ykgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414844.1;locus_tag=AC00_RS22250;product=protein YkgH;protein_id=WP_001624663.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 23471 25159 . - . ID=gene-AC00_RS22245;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=AC00_RS22245;old_locus_tag=AC00_0311 NZ_JJLU01000013.1 Protein Homology CDS 23471 25159 . - 0 ID=cds-WP_032280334.1;Parent=gene-AC00_RS22245;Dbxref=GenBank:WP_032280334.1;Name=WP_032280334.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308384.1;locus_tag=AC00_RS22245;product=choline dehydrogenase;protein_id=WP_032280334.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 25173 26645 . - . ID=gene-AC00_RS22240;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=AC00_RS22240;old_locus_tag=AC00_0312 NZ_JJLU01000013.1 Protein Homology CDS 25173 26645 . - 0 ID=cds-WP_032280335.1;Parent=gene-AC00_RS22240;Dbxref=GenBank:WP_032280335.1;Name=WP_032280335.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=AC00_RS22240;product=betaine-aldehyde dehydrogenase;protein_id=WP_032280335.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 26659 27246 . - . ID=gene-AC00_RS22235;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=AC00_RS22235;old_locus_tag=AC00_0313 NZ_JJLU01000013.1 Protein Homology CDS 26659 27246 . - 0 ID=cds-WP_001301903.1;Parent=gene-AC00_RS22235;Dbxref=GenBank:WP_001301903.1;Name=WP_001301903.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308386.3;locus_tag=AC00_RS22235;product=transcriptional regulator BetI;protein_id=WP_001301903.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 27375 29408 . + . ID=gene-AC00_RS22230;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=AC00_RS22230;old_locus_tag=AC00_0314 NZ_JJLU01000013.1 Protein Homology CDS 27375 29408 . + 0 ID=cds-WP_000131044.1;Parent=gene-AC00_RS22230;Dbxref=GenBank:WP_000131044.1;Name=WP_000131044.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308387.1;locus_tag=AC00_RS22230;product=choline BCCT transporter BetT;protein_id=WP_000131044.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 30284 31372 . + . ID=gene-AC00_RS22225;Name=pdeL;gbkey=Gene;gene=pdeL;gene_biotype=protein_coding;locus_tag=AC00_RS22225;old_locus_tag=AC00_0315 NZ_JJLU01000013.1 Protein Homology CDS 30284 31372 . + 0 ID=cds-WP_001324749.1;Parent=gene-AC00_RS22225;Dbxref=GenBank:WP_001324749.1;Name=WP_001324749.1;gbkey=CDS;gene=pdeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414849.1;locus_tag=AC00_RS22225;product=DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL;protein_id=WP_001324749.1;transl_table=11 NZ_JJLU01000013.1 RefSeq gene 31414 32346 . - . ID=gene-AC00_RS22220;Name=yahB;gbkey=Gene;gene=yahB;gene_biotype=protein_coding;locus_tag=AC00_RS22220;old_locus_tag=AC00_0316 NZ_JJLU01000013.1 Protein Homology CDS 31414 32346 . - 0 ID=cds-WP_001084388.1;Parent=gene-AC00_RS22220;Dbxref=GenBank:WP_001084388.1;Name=WP_001084388.1;gbkey=CDS;gene=yahB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414850.1;locus_tag=AC00_RS22220;product=LysR substrate-binding domain-containing protein;protein_id=WP_001084388.1;transl_table=11 NZ_JJLU01000013.1 RefSeq pseudogene 32438 32809 . - . ID=gene-AC00_RS22215;Name=AC00_RS22215;end_range=32809,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22215;old_locus_tag=AC00_0317;partial=true;pseudo=true NZ_JJLU01000013.1 Protein Homology CDS 32438 32809 . - 0 ID=cds-AC00_RS22215;Parent=gene-AC00_RS22215;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005886;end_range=32809,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AC00_RS22215;partial=true;product=DUF1097 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000013.1 RefSeq pseudogene 32865 33142 . + . ID=gene-AC00_RS22210;Name=AC00_RS22210;end_range=33142,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22210;old_locus_tag=AC00_0318;partial=true;pseudo=true NZ_JJLU01000013.1 Protein Homology CDS 32865 33142 . + 0 ID=cds-AC00_RS22210;Parent=gene-AC00_RS22210;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=33142,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS22210;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000014.1 1 3858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000014.1 RefSeq region 1 3858 . + . ID=NZ_JJLU01000014.1:1..3858;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000014.1 RefSeq pseudogene 1 224 . + . ID=gene-AC00_RS22205;Name=AC00_RS22205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22205;old_locus_tag=AC00_0319;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000014.1 Protein Homology CDS 1 224 . + 2 ID=cds-AC00_RS22205;Parent=gene-AC00_RS22205;Note=RepA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AC00_RS22205;partial=true;product=incFII family plasmid replication initiator RepA;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000014.1 RefSeq pseudogene 1136 1273 . + . ID=gene-AC00_RS31105;Name=AC00_RS31105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31105;partial=true;pseudo=true;start_range=.,1136 NZ_JJLU01000014.1 Protein Homology CDS 1136 1273 . + 0 ID=cds-AC00_RS31105;Parent=gene-AC00_RS31105;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077272.1;locus_tag=AC00_RS31105;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1136;transl_table=11 NZ_JJLU01000014.1 RefSeq gene 1293 1556 . + . ID=gene-AC00_RS22200;Name=AC00_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22200;old_locus_tag=AC00_0321 NZ_JJLU01000014.1 Protein Homology CDS 1293 1556 . + 0 ID=cds-WP_001089474.1;Parent=gene-AC00_RS22200;Dbxref=GenBank:WP_001089474.1;Name=WP_001089474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089474.1;locus_tag=AC00_RS22200;product=hypothetical protein;protein_id=WP_001089474.1;transl_table=11 NZ_JJLU01000014.1 RefSeq gene 1546 1845 . + . ID=gene-AC00_RS22195;Name=AC00_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22195;old_locus_tag=AC00_0322 NZ_JJLU01000014.1 Protein Homology CDS 1546 1845 . + 0 ID=cds-WP_001528606.1;Parent=gene-AC00_RS22195;Dbxref=GenBank:WP_001528606.1;Name=WP_001528606.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528606.1;locus_tag=AC00_RS22195;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001528606.1;transl_table=11 NZ_JJLU01000014.1 RefSeq gene 1881 2546 . - . ID=gene-AC00_RS22190;Name=AC00_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22190;old_locus_tag=AC00_0323 NZ_JJLU01000014.1 Protein Homology CDS 1881 2546 . - 0 ID=cds-WP_032280320.1;Parent=gene-AC00_RS22190;Dbxref=GenBank:WP_032280320.1;Name=WP_032280320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528604.1;locus_tag=AC00_RS22190;product=DUF6710 family protein;protein_id=WP_032280320.1;transl_table=11 NZ_JJLU01000014.1 RefSeq pseudogene 3265 3858 . - . ID=gene-AC00_RS22185;Name=AC00_RS22185;end_range=3858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22185;old_locus_tag=AC00_0324;partial=true;pseudo=true NZ_JJLU01000014.1 Protein Homology CDS 3265 3858 . - 1 ID=cds-AC00_RS22185;Parent=gene-AC00_RS22185;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3858,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS22185;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000015.1 1 566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000015.1 RefSeq region 1 566 . + . ID=NZ_JJLU01000015.1:1..566;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000015.1 RefSeq gene 1 204 . - . ID=gene-AC00_RS0123780;Name=AC00_RS0123780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123780;old_locus_tag=AC00_0325;partial=true;start_range=.,1 NZ_JJLU01000015.1 Protein Homology CDS 1 204 . - 0 ID=cds-WP_000179201.1;Parent=gene-AC00_RS0123780;Dbxref=GenBank:WP_000179201.1;Name=WP_000179201.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123780;partial=true;product=IS1 family transposase;protein_id=WP_000179201.1;start_range=.,1;transl_table=11 NZ_JJLU01000015.1 RefSeq gene 310 566 . - . ID=gene-AC00_RS22180;Name=AC00_RS22180;end_range=566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22180;old_locus_tag=AC00_0326;partial=true NZ_JJLU01000015.1 Protein Homology CDS 310 566 . - 2 ID=cds-WP_000474469.1;Parent=gene-AC00_RS22180;Dbxref=GenBank:WP_000474469.1;Name=WP_000474469.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=566,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS22180;partial=true;product=IS1 family transposase;protein_id=WP_000474469.1;transl_table=11 ##sequence-region NZ_JJLU01000016.1 1 8675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000016.1 RefSeq region 1 8675 . + . ID=NZ_JJLU01000016.1:1..8675;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000016.1 RefSeq gene 1 277 . + . ID=gene-AC00_RS22175;Name=AC00_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22175;old_locus_tag=AC00_0327;partial=true;start_range=.,1 NZ_JJLU01000016.1 Protein Homology CDS 1 277 . + 1 ID=cds-WP_000364015.1;Parent=gene-AC00_RS22175;Dbxref=GenBank:WP_000364015.1;Name=WP_000364015.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS22175;partial=true;product=IS1 family transposase;protein_id=WP_000364015.1;start_range=.,1;transl_table=11 NZ_JJLU01000016.1 RefSeq pseudogene 293 427 . - . ID=gene-AC00_RS27025;Name=AC00_RS27025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27025;partial=true;pseudo=true;start_range=.,293 NZ_JJLU01000016.1 Protein Homology CDS 293 427 . - 0 ID=cds-AC00_RS27025;Parent=gene-AC00_RS27025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414851.1;locus_tag=AC00_RS27025;partial=true;product=DUF1097 domain-containing protein;pseudo=true;start_range=.,293;transl_table=11 NZ_JJLU01000016.1 RefSeq gene 685 1290 . + . ID=gene-AC00_RS22170;Name=yahD;gbkey=Gene;gene=yahD;gene_biotype=protein_coding;locus_tag=AC00_RS22170;old_locus_tag=AC00_0328 NZ_JJLU01000016.1 Protein Homology CDS 685 1290 . + 0 ID=cds-WP_032280342.1;Parent=gene-AC00_RS22170;Dbxref=GenBank:WP_032280342.1;Name=WP_032280342.1;Ontology_term=GO:0005515;gbkey=CDS;gene=yahD;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414852.1;locus_tag=AC00_RS22170;product=ankyrin repeat domain-containing protein;protein_id=WP_032280342.1;transl_table=11 NZ_JJLU01000016.1 RefSeq gene 1330 2193 . + . ID=gene-AC00_RS0123785;Name=yahE;gbkey=Gene;gene=yahE;gene_biotype=protein_coding;locus_tag=AC00_RS0123785 NZ_JJLU01000016.1 Protein Homology CDS 1330 2193 . + 0 ID=cds-WP_032280343.1;Parent=gene-AC00_RS0123785;Dbxref=GenBank:WP_032280343.1;Name=WP_032280343.1;gbkey=CDS;gene=yahE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414853.1;locus_tag=AC00_RS0123785;product=DUF2877 domain-containing protein;protein_id=WP_032280343.1;transl_table=11 NZ_JJLU01000016.1 RefSeq gene 2183 3730 . + . ID=gene-AC00_RS22165;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AC00_RS22165;old_locus_tag=AC00_0331 NZ_JJLU01000016.1 Protein Homology CDS 2183 3730 . + 0 ID=cds-WP_032280344.1;Parent=gene-AC00_RS22165;Dbxref=GenBank:WP_032280344.1;Name=WP_032280344.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414854.1;locus_tag=AC00_RS22165;product=acyl-CoA synthetase FdrA;protein_id=WP_032280344.1;transl_table=11 NZ_JJLU01000016.1 RefSeq gene 3730 5148 . + . ID=gene-AC00_RS22160;Name=yahG;gbkey=Gene;gene=yahG;gene_biotype=protein_coding;locus_tag=AC00_RS22160;old_locus_tag=AC00_0332 NZ_JJLU01000016.1 Protein Homology CDS 3730 5148 . + 0 ID=cds-WP_032280345.1;Parent=gene-AC00_RS22160;Dbxref=GenBank:WP_032280345.1;Name=WP_032280345.1;gbkey=CDS;gene=yahG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414855.1;locus_tag=AC00_RS22160;product=DUF1116 domain-containing protein;protein_id=WP_032280345.1;transl_table=11 NZ_JJLU01000016.1 RefSeq gene 5291 6241 . + . ID=gene-AC00_RS22155;Name=yahI;gbkey=Gene;gene=yahI;gene_biotype=protein_coding;locus_tag=AC00_RS22155;old_locus_tag=AC00_0333 NZ_JJLU01000016.1 Protein Homology CDS 5291 6241 . + 0 ID=cds-WP_000661637.1;Parent=gene-AC00_RS22155;Dbxref=GenBank:WP_000661637.1;Name=WP_000661637.1;gbkey=CDS;gene=yahI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308399.1;locus_tag=AC00_RS22155;product=carbamate kinase family protein;protein_id=WP_000661637.1;transl_table=11 NZ_JJLU01000016.1 RefSeq pseudogene 6251 7633 . + . ID=gene-AC00_RS22150;Name=yahJ;gbkey=Gene;gene=yahJ;gene_biotype=pseudogene;locus_tag=AC00_RS22150;old_locus_tag=AC00_0335;pseudo=true NZ_JJLU01000016.1 Protein Homology CDS 6251 7633 . + 0 ID=cds-AC00_RS22150;Parent=gene-AC00_RS22150;Note=internal stop;gbkey=CDS;gene=yahJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414858.1;locus_tag=AC00_RS22150;product=amidohydrolase family protein;pseudo=true;transl_table=11 NZ_JJLU01000016.1 RefSeq gene 7932 8342 . + . ID=gene-AC00_RS22145;Name=AC00_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22145;old_locus_tag=AC00_0336 NZ_JJLU01000016.1 Protein Homology CDS 7932 8342 . + 0 ID=cds-WP_001317647.1;Parent=gene-AC00_RS22145;Dbxref=GenBank:WP_001317647.1;Name=WP_001317647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502591.1;locus_tag=AC00_RS22145;product=ASCH domain-containing protein;protein_id=WP_001317647.1;transl_table=11 NZ_JJLU01000016.1 RefSeq pseudogene 8382 8675 . - . ID=gene-AC00_RS22140;Name=AC00_RS22140;end_range=8675,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS22140;old_locus_tag=AC00_0337;partial=true;pseudo=true NZ_JJLU01000016.1 Protein Homology CDS 8382 8675 . - 0 ID=cds-AC00_RS22140;Parent=gene-AC00_RS22140;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=8675,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS22140;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000017.1 1 18988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000017.1 RefSeq region 1 18988 . + . ID=NZ_JJLU01000017.1:1..18988;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000017.1 RefSeq gene 1 212 . - . ID=gene-AC00_RS0123790;Name=AC00_RS0123790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123790;old_locus_tag=AC00_0338;partial=true;start_range=.,1 NZ_JJLU01000017.1 Protein Homology CDS 1 212 . - 0 ID=cds-WP_000179205.1;Parent=gene-AC00_RS0123790;Dbxref=GenBank:WP_000179205.1;Name=WP_000179205.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123790;partial=true;product=IS1 family transposase;protein_id=WP_000179205.1;start_range=.,1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 506 1489 . + . ID=gene-AC00_RS22135;Name=AC00_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22135;old_locus_tag=AC00_0339 NZ_JJLU01000017.1 Protein Homology CDS 506 1489 . + 0 ID=cds-WP_001042107.1;Parent=gene-AC00_RS22135;Dbxref=GenBank:WP_001042107.1;Name=WP_001042107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224897.1;locus_tag=AC00_RS22135;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=WP_001042107.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 1538 3022 . + . ID=gene-AC00_RS22130;Name=AC00_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22130;old_locus_tag=AC00_0340 NZ_JJLU01000017.1 Protein Homology CDS 1538 3022 . + 0 ID=cds-WP_032288150.1;Parent=gene-AC00_RS22130;Dbxref=GenBank:WP_032288150.1;Name=WP_032288150.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308402.2;locus_tag=AC00_RS22130;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032288150.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 3015 3986 . + . ID=gene-AC00_RS22125;Name=AC00_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22125;old_locus_tag=AC00_0341 NZ_JJLU01000017.1 Protein Homology CDS 3015 3986 . + 0 ID=cds-WP_000818900.1;Parent=gene-AC00_RS22125;Dbxref=GenBank:WP_000818900.1;Name=WP_000818900.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308404.1;locus_tag=AC00_RS22125;product=ABC transporter permease;protein_id=WP_000818900.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 3983 4939 . + . ID=gene-AC00_RS22120;Name=AC00_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22120;old_locus_tag=AC00_0342 NZ_JJLU01000017.1 Protein Homology CDS 3983 4939 . + 0 ID=cds-WP_000750339.1;Parent=gene-AC00_RS22120;Dbxref=GenBank:WP_000750339.1;Name=WP_000750339.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308405.1;locus_tag=AC00_RS22120;product=ABC transporter permease;protein_id=WP_000750339.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 5026 6075 . + . ID=gene-AC00_RS22115;Name=yahK;gbkey=Gene;gene=yahK;gene_biotype=protein_coding;locus_tag=AC00_RS22115;old_locus_tag=AC00_0343 NZ_JJLU01000017.1 Protein Homology CDS 5026 6075 . + 0 ID=cds-WP_000692757.1;Parent=gene-AC00_RS22115;Dbxref=GenBank:WP_000692757.1;Name=WP_000692757.1;gbkey=CDS;gene=yahK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414859.1;locus_tag=AC00_RS22115;product=NADPH-dependent aldehyde reductase YahK;protein_id=WP_000692757.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 6318 7133 . + . ID=gene-AC00_RS22110;Name=yahL;gbkey=Gene;gene=yahL;gene_biotype=protein_coding;locus_tag=AC00_RS22110;old_locus_tag=AC00_0344 NZ_JJLU01000017.1 Protein Homology CDS 6318 7133 . + 0 ID=cds-WP_001307614.1;Parent=gene-AC00_RS22110;Dbxref=GenBank:WP_001307614.1;Name=WP_001307614.1;gbkey=CDS;gene=yahL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308407.1;locus_tag=AC00_RS22110;product=protein YahL;protein_id=WP_001307614.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 7546 7791 . + . ID=gene-AC00_RS0123795;Name=yahM;gbkey=Gene;gene=yahM;gene_biotype=protein_coding;locus_tag=AC00_RS0123795 NZ_JJLU01000017.1 Protein Homology CDS 7546 7791 . + 0 ID=cds-WP_000290614.1;Parent=gene-AC00_RS0123795;Dbxref=GenBank:WP_000290614.1;Name=WP_000290614.1;gbkey=CDS;gene=yahM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414861.2;locus_tag=AC00_RS0123795;product=protein YahM;protein_id=WP_000290614.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 7808 8479 . - . ID=gene-AC00_RS22105;Name=yahN;gbkey=Gene;gene=yahN;gene_biotype=protein_coding;locus_tag=AC00_RS22105;old_locus_tag=AC00_0346 NZ_JJLU01000017.1 Protein Homology CDS 7808 8479 . - 0 ID=cds-WP_077757343.1;Parent=gene-AC00_RS22105;Dbxref=GenBank:WP_077757343.1;Name=WP_077757343.1;gbkey=CDS;gene=yahN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414862.1;locus_tag=AC00_RS22105;product=LysE family transporter;protein_id=WP_077757343.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 8626 8901 . + . ID=gene-AC00_RS22100;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=AC00_RS22100;old_locus_tag=AC00_0347 NZ_JJLU01000017.1 Protein Homology CDS 8626 8901 . + 0 ID=cds-WP_000691952.1;Parent=gene-AC00_RS22100;Dbxref=GenBank:WP_000691952.1;Name=WP_000691952.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308410.1;locus_tag=AC00_RS22100;product=DUF1471 family periplasmic protein YahO;protein_id=WP_000691952.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 8999 10585 . - . ID=gene-AC00_RS22095;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=AC00_RS22095;old_locus_tag=AC00_0349 NZ_JJLU01000017.1 Protein Homology CDS 8999 10585 . - 0 ID=cds-WP_032280349.1;Parent=gene-AC00_RS22095;Dbxref=GenBank:WP_032280349.1;Name=WP_032280349.1;gbkey=CDS;gene=prpR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414864.1;locus_tag=AC00_RS22095;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_032280349.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 10824 11714 . + . ID=gene-AC00_RS22090;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=AC00_RS22090;old_locus_tag=AC00_0350 NZ_JJLU01000017.1 Protein Homology CDS 10824 11714 . + 0 ID=cds-WP_032280350.1;Parent=gene-AC00_RS22090;Dbxref=GenBank:WP_032280350.1;Name=WP_032280350.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308412.1;locus_tag=AC00_RS22090;product=methylisocitrate lyase;protein_id=WP_032280350.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 11870 13039 . + . ID=gene-AC00_RS22085;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=AC00_RS22085;old_locus_tag=AC00_0351 NZ_JJLU01000017.1 Protein Homology CDS 11870 13039 . + 0 ID=cds-WP_001285909.1;Parent=gene-AC00_RS22085;Dbxref=GenBank:WP_001285909.1;Name=WP_001285909.1;Ontology_term=GO:0019679,GO:0004108,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate (Si)-synthase activity|0004108||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308413.1;locus_tag=AC00_RS22085;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_001285909.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 13073 14524 . + . ID=gene-AC00_RS22080;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=AC00_RS22080;old_locus_tag=AC00_0352 NZ_JJLU01000017.1 Protein Homology CDS 13073 14524 . + 0 ID=cds-WP_032280352.1;Parent=gene-AC00_RS22080;Dbxref=GenBank:WP_032280352.1;Name=WP_032280352.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308414.1;locus_tag=AC00_RS22080;product=2-methylcitrate dehydratase;protein_id=WP_032280352.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 14564 16450 . + . ID=gene-AC00_RS22075;Name=prpE;gbkey=Gene;gene=prpE;gene_biotype=protein_coding;locus_tag=AC00_RS22075;old_locus_tag=AC00_0353 NZ_JJLU01000017.1 Protein Homology CDS 14564 16450 . + 0 ID=cds-WP_032280353.1;Parent=gene-AC00_RS22075;Dbxref=GenBank:WP_032280353.1;Name=WP_032280353.1;Ontology_term=GO:0019629,GO:0050218;gbkey=CDS;gene=prpE;go_function=propionate-CoA ligase activity|0050218||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308415.1;locus_tag=AC00_RS22075;product=propionate--CoA ligase;protein_id=WP_032280353.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 17435 18694 . + . ID=gene-AC00_RS22070;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AC00_RS22070;old_locus_tag=AC00_0355 NZ_JJLU01000017.1 Protein Homology CDS 17435 18694 . + 0 ID=cds-WP_032280354.1;Parent=gene-AC00_RS22070;Dbxref=GenBank:WP_032280354.1;Name=WP_032280354.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AC00_RS22070;product=cytosine permease;protein_id=WP_032280354.1;transl_table=11 NZ_JJLU01000017.1 RefSeq gene 18684 18988 . + . ID=gene-AC00_RS22065;Name=AC00_RS22065;end_range=18988,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22065;old_locus_tag=AC00_0356;partial=true NZ_JJLU01000017.1 Protein Homology CDS 18684 18988 . + 0 ID=cds-WP_032288151.1;Parent=gene-AC00_RS22065;Dbxref=GenBank:WP_032288151.1;Name=WP_032288151.1;end_range=18988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AC00_RS22065;partial=true;product=amidohydrolase family protein;protein_id=WP_032288151.1;transl_table=11 ##sequence-region NZ_JJLU01000018.1 1 22146 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000018.1 RefSeq region 1 22146 . + . ID=NZ_JJLU01000018.1:1..22146;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000018.1 RefSeq gene 777 2036 . + . ID=gene-AC00_RS22060;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=AC00_RS22060;old_locus_tag=AC00_0361 NZ_JJLU01000018.1 Protein Homology CDS 777 2036 . + 0 ID=cds-WP_032280354.1-2;Parent=gene-AC00_RS22060;Dbxref=GenBank:WP_032280354.1;Name=WP_032280354.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414870.1;locus_tag=AC00_RS22060;product=cytosine permease;protein_id=WP_032280354.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 2026 3309 . + . ID=gene-AC00_RS22055;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=AC00_RS22055;old_locus_tag=AC00_0362 NZ_JJLU01000018.1 Protein Homology CDS 2026 3309 . + 0 ID=cds-WP_032280355.1;Parent=gene-AC00_RS22055;Dbxref=GenBank:WP_032280355.1;Name=WP_032280355.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414871.1;locus_tag=AC00_RS22055;product=cytosine/isoguanine deaminase;protein_id=WP_032280355.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 3442 4341 . - . ID=gene-AC00_RS22050;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=AC00_RS22050;old_locus_tag=AC00_0363 NZ_JJLU01000018.1 Protein Homology CDS 3442 4341 . - 0 ID=cds-WP_032280356.1;Parent=gene-AC00_RS22050;Dbxref=GenBank:WP_032280356.1;Name=WP_032280356.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308418.1;locus_tag=AC00_RS22050;product=transcriptional regulator CynR;protein_id=WP_032280356.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 4451 5110 . + . ID=gene-AC00_RS22045;Name=cynT;gbkey=Gene;gene=cynT;gene_biotype=protein_coding;locus_tag=AC00_RS22045;old_locus_tag=AC00_0364 NZ_JJLU01000018.1 Protein Homology CDS 4451 5110 . + 0 ID=cds-WP_000658652.1;Parent=gene-AC00_RS22045;Dbxref=GenBank:WP_000658652.1;Name=WP_000658652.1;gbkey=CDS;gene=cynT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414873.1;locus_tag=AC00_RS22045;product=carbonic anhydrase CynT;protein_id=WP_000658652.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 5141 5611 . + . ID=gene-AC00_RS22040;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=AC00_RS22040;old_locus_tag=AC00_0365 NZ_JJLU01000018.1 Protein Homology CDS 5141 5611 . + 0 ID=cds-WP_000616247.1;Parent=gene-AC00_RS22040;Dbxref=GenBank:WP_000616247.1;Name=WP_000616247.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308420.1;locus_tag=AC00_RS22040;product=cyanase;protein_id=WP_000616247.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 5617 6798 . + . ID=gene-AC00_RS22035;Name=cynX;gbkey=Gene;gene=cynX;gene_biotype=protein_coding;locus_tag=AC00_RS22035;old_locus_tag=AC00_0366 NZ_JJLU01000018.1 Protein Homology CDS 5617 6798 . + 0 ID=cds-WP_032288152.1;Parent=gene-AC00_RS22035;Dbxref=GenBank:WP_032288152.1;Name=WP_032288152.1;gbkey=CDS;gene=cynX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308421.2;locus_tag=AC00_RS22035;product=cyanate transporter CynX;protein_id=WP_032288152.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 6901 7512 . - . ID=gene-AC00_RS22030;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=AC00_RS22030;old_locus_tag=AC00_0367 NZ_JJLU01000018.1 Protein Homology CDS 6901 7512 . - 0 ID=cds-WP_032280359.1;Parent=gene-AC00_RS22030;Dbxref=GenBank:WP_032280359.1;Name=WP_032280359.1;gbkey=CDS;gene=lacA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308422.1;locus_tag=AC00_RS22030;product=galactoside O-acetyltransferase;protein_id=WP_032280359.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 7578 8831 . - . ID=gene-AC00_RS22025;Name=lacY;gbkey=Gene;gene=lacY;gene_biotype=protein_coding;locus_tag=AC00_RS22025;old_locus_tag=AC00_0368 NZ_JJLU01000018.1 Protein Homology CDS 7578 8831 . - 0 ID=cds-WP_000291541.1;Parent=gene-AC00_RS22025;Dbxref=GenBank:WP_000291541.1;Name=WP_000291541.1;gbkey=CDS;gene=lacY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308423.1;locus_tag=AC00_RS22025;product=lactose permease;protein_id=WP_000291541.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 8883 11957 . - . ID=gene-AC00_RS22020;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=AC00_RS22020;old_locus_tag=AC00_0369 NZ_JJLU01000018.1 Protein Homology CDS 8883 11957 . - 0 ID=cds-WP_032280360.1;Parent=gene-AC00_RS22020;Dbxref=GenBank:WP_032280360.1;Name=WP_032280360.1;gbkey=CDS;gene=lacZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308424.1;locus_tag=AC00_RS22020;product=beta-galactosidase;protein_id=WP_032280360.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 12080 13162 . - . ID=gene-AC00_RS22015;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=AC00_RS22015;old_locus_tag=AC00_0370 NZ_JJLU01000018.1 Protein Homology CDS 12080 13162 . - 0 ID=cds-WP_071999211.1;Parent=gene-AC00_RS22015;Dbxref=GenBank:WP_071999211.1;Name=WP_071999211.1;gbkey=CDS;gene=lacI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414879.3;locus_tag=AC00_RS22015;product=DNA-binding transcriptional repressor LacI;protein_id=WP_071999211.1;transl_table=11 NZ_JJLU01000018.1 RefSeq pseudogene 13199 14152 . - . ID=gene-AC00_RS0123800;Name=AC00_RS0123800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123800;pseudo=true NZ_JJLU01000018.1 Protein Homology CDS 13199 14152 . - 0 ID=cds-AC00_RS0123800;Parent=gene-AC00_RS0123800;Note=internal stop;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308426.1;locus_tag=AC00_RS0123800;product=GlxA family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 14172 14948 . - . ID=gene-AC00_RS22010;Name=AC00_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS22010;old_locus_tag=AC00_0373 NZ_JJLU01000018.1 Protein Homology CDS 14172 14948 . - 0 ID=cds-WP_032280361.1;Parent=gene-AC00_RS22010;Dbxref=GenBank:WP_032280361.1;Name=WP_032280361.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308427.2;locus_tag=AC00_RS22010;product=MBL fold metallo-hydrolase;protein_id=WP_032280361.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 15063 15896 . - . ID=gene-AC00_RS22005;Name=mhpR;gbkey=Gene;gene=mhpR;gene_biotype=protein_coding;locus_tag=AC00_RS22005;old_locus_tag=AC00_0374 NZ_JJLU01000018.1 Protein Homology CDS 15063 15896 . - 0 ID=cds-WP_001180626.1;Parent=gene-AC00_RS22005;Dbxref=GenBank:WP_001180626.1;Name=WP_001180626.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=mhpR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414880.2;locus_tag=AC00_RS22005;product=DNA-binding transcriptional regulator;protein_id=WP_001180626.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 16087 17751 . + . ID=gene-AC00_RS22000;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=AC00_RS22000;old_locus_tag=AC00_0375 NZ_JJLU01000018.1 Protein Homology CDS 16087 17751 . + 0 ID=cds-WP_001007431.1;Parent=gene-AC00_RS22000;Dbxref=GenBank:WP_001007431.1;Name=WP_001007431.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308429.1;locus_tag=AC00_RS22000;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_001007431.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 17753 18697 . + . ID=gene-AC00_RS21995;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=AC00_RS21995;old_locus_tag=AC00_0376 NZ_JJLU01000018.1 Protein Homology CDS 17753 18697 . + 0 ID=cds-WP_021556541.1;Parent=gene-AC00_RS21995;Dbxref=GenBank:WP_021556541.1;Name=WP_021556541.1;gbkey=CDS;gene=mhpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308430.1;locus_tag=AC00_RS21995;product=2%2C3-dihydroxyphenylpropionate/2%2C3-dihydroxicinnamic acid 1%2C2-dioxygenase;protein_id=WP_021556541.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 18715 19581 . + . ID=gene-AC00_RS21990;Name=mhpC;gbkey=Gene;gene=mhpC;gene_biotype=protein_coding;locus_tag=AC00_RS21990;old_locus_tag=AC00_0377 NZ_JJLU01000018.1 Protein Homology CDS 18715 19581 . + 0 ID=cds-WP_000121896.1;Parent=gene-AC00_RS21990;Dbxref=GenBank:WP_000121896.1;Name=WP_000121896.1;gbkey=CDS;gene=mhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308431.3;locus_tag=AC00_RS21990;product=2-hydroxy-6-oxonona-2%2C4-dienedioate hydrolase;protein_id=WP_000121896.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 19591 20400 . + . ID=gene-AC00_RS21985;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=AC00_RS21985;old_locus_tag=AC00_0378 NZ_JJLU01000018.1 Protein Homology CDS 19591 20400 . + 0 ID=cds-WP_032280363.1;Parent=gene-AC00_RS21985;Dbxref=GenBank:WP_032280363.1;Name=WP_032280363.1;gbkey=CDS;gene=mhpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308432.2;locus_tag=AC00_RS21985;product=2-keto-4-pentenoate hydratase;protein_id=WP_032280363.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 20397 21347 . + . ID=gene-AC00_RS21980;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=protein_coding;locus_tag=AC00_RS21980;old_locus_tag=AC00_0379 NZ_JJLU01000018.1 Protein Homology CDS 20397 21347 . + 0 ID=cds-WP_000044325.1;Parent=gene-AC00_RS21980;Dbxref=GenBank:WP_000044325.1;Name=WP_000044325.1;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308433.1;locus_tag=AC00_RS21980;product=acetaldehyde dehydrogenase;protein_id=WP_000044325.1;transl_table=11 NZ_JJLU01000018.1 RefSeq gene 21344 22146 . + . ID=gene-AC00_RS21975;Name=mhpE;end_range=22146,.;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AC00_RS21975;old_locus_tag=AC00_0380;partial=true NZ_JJLU01000018.1 Protein Homology CDS 21344 22146 . + 0 ID=cds-WP_032288153.1;Parent=gene-AC00_RS21975;Dbxref=GenBank:WP_032288153.1;Name=WP_032288153.1;end_range=22146,.;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AC00_RS21975;partial=true;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_032288153.1;transl_table=11 ##sequence-region NZ_JJLU01000019.1 1 36940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000019.1 RefSeq region 1 36940 . + . ID=NZ_JJLU01000019.1:1..36940;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000019.1 RefSeq pseudogene 1 445 . + . ID=gene-AC00_RS21970;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=pseudogene;locus_tag=AC00_RS21970;old_locus_tag=AC00_0381;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000019.1 Protein Homology CDS 1 445 . + 1 ID=cds-AC00_RS21970;Parent=gene-AC00_RS21970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308433.1;locus_tag=AC00_RS21970;partial=true;product=acetaldehyde dehydrogenase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 442 1455 . + . ID=gene-AC00_RS21965;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AC00_RS21965;old_locus_tag=AC00_0382 NZ_JJLU01000019.1 Protein Homology CDS 442 1455 . + 0 ID=cds-WP_001013507.1;Parent=gene-AC00_RS21965;Dbxref=GenBank:WP_001013507.1;Name=WP_001013507.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AC00_RS21965;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013507.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 1932 3143 . + . ID=gene-AC00_RS21960;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=AC00_RS21960;old_locus_tag=AC00_0383 NZ_JJLU01000019.1 Protein Homology CDS 1932 3143 . + 0 ID=cds-WP_032280364.1;Parent=gene-AC00_RS21960;Dbxref=GenBank:WP_032280364.1;Name=WP_032280364.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308435.2;locus_tag=AC00_RS21960;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_032280364.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 3245 3784 . + . ID=gene-AC00_RS21955;Name=AC00_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21955;old_locus_tag=AC00_0384 NZ_JJLU01000019.1 Protein Homology CDS 3245 3784 . + 0 ID=cds-WP_001096705.1;Parent=gene-AC00_RS21955;Dbxref=GenBank:WP_001096705.1;Name=WP_001096705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414888.4;locus_tag=AC00_RS21955;product=DUF2058 domain-containing protein;protein_id=WP_001096705.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 3909 4742 . - . ID=gene-AC00_RS21950;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=AC00_RS21950;old_locus_tag=AC00_0385 NZ_JJLU01000019.1 Protein Homology CDS 3909 4742 . - 0 ID=cds-WP_032280365.1;Parent=gene-AC00_RS21950;Dbxref=GenBank:WP_032280365.1;Name=WP_032280365.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308437.1;locus_tag=AC00_RS21950;product=S-formylglutathione hydrolase;protein_id=WP_032280365.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 4835 5944 . - . ID=gene-AC00_RS21945;Name=frmA;gbkey=Gene;gene=frmA;gene_biotype=protein_coding;locus_tag=AC00_RS21945;old_locus_tag=AC00_0386 NZ_JJLU01000019.1 Protein Homology CDS 4835 5944 . - 0 ID=cds-WP_032280366.1;Parent=gene-AC00_RS21945;Dbxref=GenBank:WP_032280366.1;Name=WP_032280366.1;gbkey=CDS;gene=frmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308438.1;locus_tag=AC00_RS21945;product=S-(hydroxymethyl)glutathione dehydrogenase;protein_id=WP_032280366.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 5979 6254 . - . ID=gene-AC00_RS0123805;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=AC00_RS0123805 NZ_JJLU01000019.1 Protein Homology CDS 5979 6254 . - 0 ID=cds-WP_001141271.1;Parent=gene-AC00_RS0123805;Dbxref=GenBank:WP_001141271.1;Name=WP_001141271.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414891.4;locus_tag=AC00_RS0123805;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_001141271.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 6414 7460 . - . ID=gene-AC00_RS21940;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=AC00_RS21940;old_locus_tag=AC00_0388 NZ_JJLU01000019.1 Protein Homology CDS 6414 7460 . - 0 ID=cds-WP_000078831.1;Parent=gene-AC00_RS21940;Dbxref=GenBank:WP_000078831.1;Name=WP_000078831.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=fbpC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308440.2;locus_tag=AC00_RS21940;product=ferric ABC transporter ATP-binding protein;protein_id=WP_000078831.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 7472 9550 . - . ID=gene-AC00_RS21935;Name=AC00_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21935;old_locus_tag=AC00_0389 NZ_JJLU01000019.1 Protein Homology CDS 7472 9550 . - 0 ID=cds-WP_032280367.1;Parent=gene-AC00_RS21935;Dbxref=GenBank:WP_032280367.1;Name=WP_032280367.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308441.1;locus_tag=AC00_RS21935;product=ABC transporter permease;protein_id=WP_032280367.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 9619 10650 . - . ID=gene-AC00_RS21930;Name=AC00_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21930;old_locus_tag=AC00_0390 NZ_JJLU01000019.1 Protein Homology CDS 9619 10650 . - 0 ID=cds-WP_032280368.1;Parent=gene-AC00_RS21930;Dbxref=GenBank:WP_032280368.1;Name=WP_032280368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308442.1;locus_tag=AC00_RS21930;product=ABC transporter substrate-binding protein;protein_id=WP_032280368.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 10647 11963 . - . ID=gene-AC00_RS21925;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AC00_RS21925;old_locus_tag=AC00_0391 NZ_JJLU01000019.1 Protein Homology CDS 10647 11963 . - 0 ID=cds-WP_001312597.1;Parent=gene-AC00_RS21925;Dbxref=GenBank:WP_001312597.1;Name=WP_001312597.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312597.1;locus_tag=AC00_RS21925;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_001312597.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 12036 13577 . - . ID=gene-AC00_RS21920;Name=AC00_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21920;old_locus_tag=AC00_0392 NZ_JJLU01000019.1 Protein Homology CDS 12036 13577 . - 0 ID=cds-WP_032280369.1;Parent=gene-AC00_RS21920;Dbxref=GenBank:WP_032280369.1;Name=WP_032280369.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308444.1;locus_tag=AC00_RS21920;product=MASE1 domain-containing sensor histidine kinase;protein_id=WP_032280369.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 13577 14206 . - . ID=gene-AC00_RS21915;Name=AC00_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21915;old_locus_tag=AC00_0393 NZ_JJLU01000019.1 Protein Homology CDS 13577 14206 . - 0 ID=cds-WP_000621915.1;Parent=gene-AC00_RS21915;Dbxref=GenBank:WP_000621915.1;Name=WP_000621915.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308445.1;locus_tag=AC00_RS21915;product=response regulator transcription factor;protein_id=WP_000621915.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 14509 15471 . + . ID=gene-AC00_RS21910;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=AC00_RS21910;old_locus_tag=AC00_0394 NZ_JJLU01000019.1 Protein Homology CDS 14509 15471 . + 0 ID=cds-WP_032280370.1;Parent=gene-AC00_RS21910;Dbxref=GenBank:WP_032280370.1;Name=WP_032280370.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=AC00_RS21910;product=taurine ABC transporter substrate-binding protein;protein_id=WP_032280370.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 15484 16251 . + . ID=gene-AC00_RS21905;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=AC00_RS21905;old_locus_tag=AC00_0395 NZ_JJLU01000019.1 Protein Homology CDS 15484 16251 . + 0 ID=cds-WP_000939394.1;Parent=gene-AC00_RS21905;Dbxref=GenBank:WP_000939394.1;Name=WP_000939394.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308447.1;locus_tag=AC00_RS21905;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_000939394.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 16248 17075 . + . ID=gene-AC00_RS21900;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=AC00_RS21900;old_locus_tag=AC00_0396 NZ_JJLU01000019.1 Protein Homology CDS 16248 17075 . + 0 ID=cds-WP_000114601.1;Parent=gene-AC00_RS21900;Dbxref=GenBank:WP_000114601.1;Name=WP_000114601.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308448.1;locus_tag=AC00_RS21900;product=taurine ABC transporter permease TauC;protein_id=WP_000114601.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 17072 17923 . + . ID=gene-AC00_RS21895;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=AC00_RS21895;old_locus_tag=AC00_0397 NZ_JJLU01000019.1 Protein Homology CDS 17072 17923 . + 0 ID=cds-WP_000004024.1;Parent=gene-AC00_RS21895;Dbxref=GenBank:WP_000004024.1;Name=WP_000004024.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308449.1;locus_tag=AC00_RS21895;product=taurine dioxygenase;protein_id=WP_000004024.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 18030 19004 . - . ID=gene-AC00_RS21890;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AC00_RS21890;old_locus_tag=AC00_0398 NZ_JJLU01000019.1 Protein Homology CDS 18030 19004 . - 0 ID=cds-WP_001295337.1;Parent=gene-AC00_RS21890;Dbxref=GenBank:WP_001295337.1;Name=WP_001295337.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308450.2;locus_tag=AC00_RS21890;product=porphobilinogen synthase;protein_id=WP_001295337.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 19530 22394 . + . ID=gene-AC00_RS21885;Name=ehaB;gbkey=Gene;gene=ehaB;gene_biotype=protein_coding;locus_tag=AC00_RS21885;old_locus_tag=AC00_0399 NZ_JJLU01000019.1 Protein Homology CDS 19530 22394 . + 0 ID=cds-WP_032280372.1;Parent=gene-AC00_RS21885;Dbxref=GenBank:WP_032280372.1;Name=WP_032280372.1;gbkey=CDS;gene=ehaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308451.1;locus_tag=AC00_RS21885;product=autotransporter adhesin EhaB;protein_id=WP_032280372.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 22482 23105 . + . ID=gene-AC00_RS21880;Name=iprA;gbkey=Gene;gene=iprA;gene_biotype=protein_coding;locus_tag=AC00_RS21880;old_locus_tag=AC00_0400 NZ_JJLU01000019.1 Protein Homology CDS 22482 23105 . + 0 ID=cds-WP_032280373.1;Parent=gene-AC00_RS21880;Dbxref=GenBank:WP_032280373.1;Name=WP_032280373.1;gbkey=CDS;gene=iprA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414909.2;locus_tag=AC00_RS21880;product=hydrogen peroxide resistance inhibitor IprA;protein_id=WP_032280373.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 23106 24263 . - . ID=gene-AC00_RS21875;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=AC00_RS21875;old_locus_tag=AC00_0401 NZ_JJLU01000019.1 Protein Homology CDS 23106 24263 . - 0 ID=cds-WP_000830741.1;Parent=gene-AC00_RS21875;Dbxref=GenBank:WP_000830741.1;Name=WP_000830741.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308453.1;locus_tag=AC00_RS21875;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_000830741.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 24615 25835 . + . ID=gene-AC00_RS21865;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=AC00_RS21865;old_locus_tag=AC00_0403 NZ_JJLU01000019.1 Protein Homology CDS 24615 25835 . + 0 ID=cds-WP_001301663.1;Parent=gene-AC00_RS21865;Dbxref=GenBank:WP_001301663.1;Name=WP_001301663.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308454.1;locus_tag=AC00_RS21865;product=peptide antibiotic transporter SbmA;protein_id=WP_001301663.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 25848 26942 . + . ID=gene-AC00_RS21860;Name=yaiW;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=AC00_RS21860;old_locus_tag=AC00_0404 NZ_JJLU01000019.1 Protein Homology CDS 25848 26942 . + 0 ID=cds-WP_032280376.1;Parent=gene-AC00_RS21860;Dbxref=GenBank:WP_032280376.1;Name=WP_032280376.1;gbkey=CDS;gene=yaiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414912.1;locus_tag=AC00_RS21860;product=surface-exposed outer membrane lipoprotein YaiW;protein_id=WP_032280376.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 27001 27309 . - . ID=gene-AC00_RS21855;Name=AC00_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21855;old_locus_tag=AC00_0405 NZ_JJLU01000019.1 Protein Homology CDS 27001 27309 . - 0 ID=cds-WP_000763151.1;Parent=gene-AC00_RS21855;Dbxref=GenBank:WP_000763151.1;Name=WP_000763151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308456.1;locus_tag=AC00_RS21855;product=YaiY family protein;protein_id=WP_000763151.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 27569 27781 . + . ID=gene-AC00_RS30175;Name=AC00_RS30175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30175;old_locus_tag=AC00_0406 NZ_JJLU01000019.1 Protein Homology CDS 27569 27781 . + 0 ID=cds-WP_001295334.1;Parent=gene-AC00_RS30175;Dbxref=GenBank:WP_001295334.1;Name=WP_001295334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414914.2;locus_tag=AC00_RS30175;product=DUF2754 domain-containing protein;protein_id=WP_001295334.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 27805 28899 . - . ID=gene-AC00_RS21845;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=AC00_RS21845;old_locus_tag=AC00_0407 NZ_JJLU01000019.1 Protein Homology CDS 27805 28899 . - 0 ID=cds-WP_021534874.1;Parent=gene-AC00_RS21845;Dbxref=GenBank:WP_021534874.1;Name=WP_021534874.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308458.1;locus_tag=AC00_RS21845;product=D-alanine--D-alanine ligase;protein_id=WP_021534874.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 28977 29180 . + . ID=gene-AC00_RS30840;Name=AC00_RS30840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30840 NZ_JJLU01000019.1 Protein Homology CDS 28977 29180 . + 0 ID=cds-WP_077757345.1;Parent=gene-AC00_RS30840;Dbxref=GenBank:WP_077757345.1;Name=WP_077757345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439229.1;locus_tag=AC00_RS30840;product=hypothetical protein;protein_id=WP_077757345.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 29362 29622 . + . ID=gene-AC00_RS21840;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=AC00_RS21840;old_locus_tag=AC00_0408 NZ_JJLU01000019.1 Protein Homology CDS 29362 29622 . + 0 ID=cds-WP_000792970.1;Parent=gene-AC00_RS21840;Dbxref=GenBank:WP_000792970.1;Name=WP_000792970.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308459.1;locus_tag=AC00_RS21840;product=anti-adapter protein IraP;protein_id=WP_000792970.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 29723 31138 . + . ID=gene-AC00_RS21835;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=AC00_RS21835;old_locus_tag=AC00_0409 NZ_JJLU01000019.1 Protein Homology CDS 29723 31138 . + 0 ID=cds-WP_032280380.1;Parent=gene-AC00_RS21835;Dbxref=GenBank:WP_032280380.1;Name=WP_032280380.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414917.2;locus_tag=AC00_RS21835;product=alkaline phosphatase;protein_id=WP_032280380.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 31256 31576 . + . ID=gene-AC00_RS21830;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=AC00_RS21830;old_locus_tag=AC00_0410 NZ_JJLU01000019.1 Protein Homology CDS 31256 31576 . + 0 ID=cds-WP_032280381.1;Parent=gene-AC00_RS21830;Dbxref=GenBank:WP_032280381.1;Name=WP_032280381.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414918.4;locus_tag=AC00_RS21830;product=phosphate starvation-inducible protein PsiF;protein_id=WP_032280381.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 31678 32793 . + . ID=gene-AC00_RS21825;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=AC00_RS21825;old_locus_tag=AC00_0411 NZ_JJLU01000019.1 Protein Homology CDS 31678 32793 . + 0 ID=cds-WP_000484048.1;Parent=gene-AC00_RS21825;Dbxref=GenBank:WP_000484048.1;Name=WP_000484048.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414919.1;locus_tag=AC00_RS21825;product=diguanylate cyclase AdrA;protein_id=WP_000484048.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 32810 33619 . - . ID=gene-AC00_RS21820;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=AC00_RS21820;old_locus_tag=AC00_0412 NZ_JJLU01000019.1 Protein Homology CDS 32810 33619 . - 0 ID=cds-WP_001295331.1;Parent=gene-AC00_RS21820;Dbxref=GenBank:WP_001295331.1;Name=WP_001295331.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414920.1;locus_tag=AC00_RS21820;product=pyrroline-5-carboxylate reductase;protein_id=WP_001295331.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 33739 34197 . + . ID=gene-AC00_RS21815;Name=AC00_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21815;old_locus_tag=AC00_0413 NZ_JJLU01000019.1 Protein Homology CDS 33739 34197 . + 0 ID=cds-WP_000158157.1;Parent=gene-AC00_RS21815;Dbxref=GenBank:WP_000158157.1;Name=WP_000158157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414921.2;locus_tag=AC00_RS21815;product=YaiI/YqxD family protein;protein_id=WP_000158157.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 34380 34904 . + . ID=gene-AC00_RS21810;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=AC00_RS21810;old_locus_tag=AC00_0414 NZ_JJLU01000019.1 Protein Homology CDS 34380 34904 . + 0 ID=cds-WP_000193386.1;Parent=gene-AC00_RS21810;Dbxref=GenBank:WP_000193386.1;Name=WP_000193386.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308465.1;locus_tag=AC00_RS21810;product=shikimate kinase AroL;protein_id=WP_000193386.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 34954 35145 . + . ID=gene-AC00_RS21805;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=AC00_RS21805;old_locus_tag=AC00_0415 NZ_JJLU01000019.1 Protein Homology CDS 34954 35145 . + 0 ID=cds-WP_001142439.1;Parent=gene-AC00_RS21805;Dbxref=GenBank:WP_001142439.1;Name=WP_001142439.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308466.1;locus_tag=AC00_RS21805;product=protein YaiA;protein_id=WP_001142439.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 35403 36080 . + . ID=gene-AC00_RS21800;Name=AC00_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21800;old_locus_tag=AC00_0416 NZ_JJLU01000019.1 Protein Homology CDS 35403 36080 . + 0 ID=cds-WP_001276403.1;Parent=gene-AC00_RS21800;Dbxref=GenBank:WP_001276403.1;Name=WP_001276403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308467.1;locus_tag=AC00_RS21800;product=AroM family protein;protein_id=WP_001276403.1;transl_table=11 NZ_JJLU01000019.1 RefSeq gene 36152 36436 . + . ID=gene-AC00_RS21795;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=AC00_RS21795;old_locus_tag=AC00_0417 NZ_JJLU01000019.1 Protein Homology CDS 36152 36436 . + 0 ID=cds-WP_000941942.1;Parent=gene-AC00_RS21795;Dbxref=GenBank:WP_000941942.1;Name=WP_000941942.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308468.1;locus_tag=AC00_RS21795;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_000941942.1;transl_table=11 NZ_JJLU01000019.1 RefSeq pseudogene 36651 36940 . + . ID=gene-AC00_RS0123825;Name=AC00_RS0123825;end_range=36940,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123825;partial=true;pseudo=true NZ_JJLU01000019.1 Protein Homology CDS 36651 36940 . + 0 ID=cds-AC00_RS0123825;Parent=gene-AC00_RS0123825;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=36940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0123825;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000020.1 1 181979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000020.1 RefSeq region 1 181979 . + . ID=NZ_JJLU01000020.1:1..181979;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000020.1 RefSeq gene 1 220 . - . ID=gene-AC00_RS0123830;Name=AC00_RS0123830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123830;old_locus_tag=AC00_0419;partial=true;start_range=.,1 NZ_JJLU01000020.1 Protein Homology CDS 1 220 . - 0 ID=cds-WP_001397283.1-2;Parent=gene-AC00_RS0123830;Dbxref=GenBank:WP_001397283.1;Name=WP_001397283.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123830;partial=true;product=IS1 family transposase;protein_id=WP_001397283.1;start_range=.,1;transl_table=11 NZ_JJLU01000020.1 RefSeq pseudogene 275 2065 . + . ID=gene-AC00_RS29280;Name=AC00_RS29280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29280;partial=true;pseudo=true;start_range=.,275 NZ_JJLU01000020.1 Protein Homology CDS 275 2065 . + 0 ID=cds-AC00_RS29280;Parent=gene-AC00_RS29280;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AC00_RS29280;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,275;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 2062 2517 . + . ID=gene-AC00_RS21785;Name=AC00_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21785;old_locus_tag=AC00_0421 NZ_JJLU01000020.1 Protein Homology CDS 2062 2517 . + 0 ID=cds-WP_000194199.1;Parent=gene-AC00_RS21785;Dbxref=GenBank:WP_000194199.1;Name=WP_000194199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706281.1;locus_tag=AC00_RS21785;product=SF0329 family protein;protein_id=WP_000194199.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 2595 3506 . - . ID=gene-AC00_RS21780;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=AC00_RS21780;old_locus_tag=AC00_0422 NZ_JJLU01000020.1 Protein Homology CDS 2595 3506 . - 0 ID=cds-WP_001298537.1;Parent=gene-AC00_RS21780;Dbxref=GenBank:WP_001298537.1;Name=WP_001298537.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=AC00_RS21780;product=recombination-associated protein RdgC;protein_id=WP_001298537.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 3631 4539 . + . ID=gene-AC00_RS21775;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=AC00_RS21775;old_locus_tag=AC00_0423 NZ_JJLU01000020.1 Protein Homology CDS 3631 4539 . + 0 ID=cds-WP_001612495.1;Parent=gene-AC00_RS21775;Dbxref=GenBank:WP_001612495.1;Name=WP_001612495.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308471.2;locus_tag=AC00_RS21775;product=fructokinase;protein_id=WP_001612495.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 4682 5866 . - . ID=gene-AC00_RS21770;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=AC00_RS21770;old_locus_tag=AC00_0425 NZ_JJLU01000020.1 Protein Homology CDS 4682 5866 . - 0 ID=cds-WP_001306939.1;Parent=gene-AC00_RS21770;Dbxref=GenBank:WP_001306939.1;Name=WP_001306939.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414930.3;locus_tag=AC00_RS21770;product=MFS transporter AraJ;protein_id=WP_001306939.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 5992 9135 . - . ID=gene-AC00_RS21765;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=AC00_RS21765;old_locus_tag=AC00_0426 NZ_JJLU01000020.1 Protein Homology CDS 5992 9135 . - 0 ID=cds-WP_032288156.1;Parent=gene-AC00_RS21765;Dbxref=GenBank:WP_032288156.1;Name=WP_032288156.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308474.2;locus_tag=AC00_RS21765;product=exonuclease subunit SbcC;protein_id=WP_032288156.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 9132 10334 . - . ID=gene-AC00_RS21760;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=AC00_RS21760;old_locus_tag=AC00_0427 NZ_JJLU01000020.1 Protein Homology CDS 9132 10334 . - 0 ID=cds-WP_032288157.1;Parent=gene-AC00_RS21760;Dbxref=GenBank:WP_032288157.1;Name=WP_032288157.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308475.1;locus_tag=AC00_RS21760;product=exonuclease subunit SbcD;protein_id=WP_032288157.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 10524 11213 . + . ID=gene-AC00_RS21755;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=AC00_RS21755;old_locus_tag=AC00_0428 NZ_JJLU01000020.1 Protein Homology CDS 10524 11213 . + 0 ID=cds-WP_000113933.1;Parent=gene-AC00_RS21755;Dbxref=GenBank:WP_000113933.1;Name=WP_000113933.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=AC00_RS21755;product=phosphate response regulator transcription factor PhoB;protein_id=WP_000113933.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 11271 12566 . + . ID=gene-AC00_RS21750;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=AC00_RS21750;old_locus_tag=AC00_0429 NZ_JJLU01000020.1 Protein Homology CDS 11271 12566 . + 0 ID=cds-WP_000893611.1;Parent=gene-AC00_RS21750;Dbxref=GenBank:WP_000893611.1;Name=WP_000893611.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706288.1;locus_tag=AC00_RS21750;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_000893611.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 12973 14292 . + . ID=gene-AC00_RS21745;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=AC00_RS21745;old_locus_tag=AC00_0431 NZ_JJLU01000020.1 Protein Homology CDS 12973 14292 . + 0 ID=cds-WP_000149639.1;Parent=gene-AC00_RS21745;Dbxref=GenBank:WP_000149639.1;Name=WP_000149639.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308478.1;locus_tag=AC00_RS21745;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_000149639.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 14368 15741 . + . ID=gene-AC00_RS21740;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=AC00_RS21740;old_locus_tag=AC00_0432 NZ_JJLU01000020.1 Protein Homology CDS 14368 15741 . + 0 ID=cds-WP_001591613.1;Parent=gene-AC00_RS21740;Dbxref=GenBank:WP_001591613.1;Name=WP_001591613.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308479.1;locus_tag=AC00_RS21740;product=proline-specific permease ProY;protein_id=WP_001591613.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 15897 17714 . + . ID=gene-AC00_RS21735;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=AC00_RS21735;old_locus_tag=AC00_0433 NZ_JJLU01000020.1 Protein Homology CDS 15897 17714 . + 0 ID=cds-WP_032280386.1;Parent=gene-AC00_RS21735;Dbxref=GenBank:WP_032280386.1;Name=WP_032280386.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308480.3;locus_tag=AC00_RS21735;product=maltodextrin glucosidase;protein_id=WP_032280386.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 17902 19371 . + . ID=gene-AC00_RS21730;Name=AC00_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21730;old_locus_tag=AC00_0434 NZ_JJLU01000020.1 Protein Homology CDS 17902 19371 . + 0 ID=cds-WP_032280387.1;Parent=gene-AC00_RS21730;Dbxref=GenBank:WP_032280387.1;Name=WP_032280387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308481.1;locus_tag=AC00_RS21730;product=hypothetical protein;protein_id=WP_032280387.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 19392 19973 . - . ID=gene-AC00_RS21725;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=AC00_RS21725;old_locus_tag=AC00_0435 NZ_JJLU01000020.1 Protein Homology CDS 19392 19973 . - 0 ID=cds-WP_032280388.1;Parent=gene-AC00_RS21725;Dbxref=GenBank:WP_032280388.1;Name=WP_032280388.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308482.1;locus_tag=AC00_RS21725;product=ACP phosphodiesterase;protein_id=WP_032280388.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 20066 21136 . + . ID=gene-AC00_RS21720;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=AC00_RS21720;old_locus_tag=AC00_0436 NZ_JJLU01000020.1 Protein Homology CDS 20066 21136 . + 0 ID=cds-WP_001266503.1;Parent=gene-AC00_RS21720;Dbxref=GenBank:WP_001266503.1;Name=WP_001266503.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=AC00_RS21720;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001266503.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 21192 22319 . + . ID=gene-AC00_RS21715;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AC00_RS21715;old_locus_tag=AC00_0437 NZ_JJLU01000020.1 Protein Homology CDS 21192 22319 . + 0 ID=cds-WP_032280389.1;Parent=gene-AC00_RS21715;Dbxref=GenBank:WP_032280389.1;Name=WP_032280389.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=AC00_RS21715;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_032280389.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 22342 22674 . + . ID=gene-AC00_RS21710;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AC00_RS21710;old_locus_tag=AC00_0438 NZ_JJLU01000020.1 Protein Homology CDS 22342 22674 . + 0 ID=cds-WP_000007629.1;Parent=gene-AC00_RS21710;Dbxref=GenBank:WP_000007629.1;Name=WP_000007629.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=AC00_RS21710;product=preprotein translocase subunit YajC;protein_id=WP_000007629.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 22702 24549 . + . ID=gene-AC00_RS21705;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AC00_RS21705;old_locus_tag=AC00_0439 NZ_JJLU01000020.1 Protein Homology CDS 22702 24549 . + 0 ID=cds-WP_000934822.1;Parent=gene-AC00_RS21705;Dbxref=GenBank:WP_000934822.1;Name=WP_000934822.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=AC00_RS21705;product=protein translocase subunit SecD;protein_id=WP_000934822.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 24560 25531 . + . ID=gene-AC00_RS21700;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AC00_RS21700;old_locus_tag=AC00_0440 NZ_JJLU01000020.1 Protein Homology CDS 24560 25531 . + 0 ID=cds-WP_000046637.1;Parent=gene-AC00_RS21700;Dbxref=GenBank:WP_000046637.1;Name=WP_000046637.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308487.1;locus_tag=AC00_RS21700;product=protein translocase subunit SecF;protein_id=WP_000046637.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 25660 26007 . + . ID=gene-AC00_RS21695;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=AC00_RS21695;old_locus_tag=AC00_0441 NZ_JJLU01000020.1 Protein Homology CDS 25660 26007 . + 0 ID=cds-WP_000974813.1;Parent=gene-AC00_RS21695;Dbxref=GenBank:WP_000974813.1;Name=WP_000974813.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=AC00_RS21695;product=HNH nuclease YajD;protein_id=WP_000974813.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 26045 26929 . - . ID=gene-AC00_RS21690;Name=tsx;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=AC00_RS21690;old_locus_tag=AC00_0442 NZ_JJLU01000020.1 Protein Homology CDS 26045 26929 . - 0 ID=cds-WP_001295328.1;Parent=gene-AC00_RS21690;Dbxref=GenBank:WP_001295328.1;Name=WP_001295328.1;gbkey=CDS;gene=tsx;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308491.1;locus_tag=AC00_RS21690;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_001295328.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 27228 27767 . - . ID=gene-AC00_RS21685;Name=yajI;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=AC00_RS21685;old_locus_tag=AC00_0443 NZ_JJLU01000020.1 Protein Homology CDS 27228 27767 . - 0 ID=cds-WP_032280390.1;Parent=gene-AC00_RS21685;Dbxref=GenBank:WP_032280390.1;Name=WP_032280390.1;gbkey=CDS;gene=yajI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308492.2;locus_tag=AC00_RS21685;product=DUF3251 domain-containing protein;protein_id=WP_032280390.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 27918 28367 . + . ID=gene-AC00_RS0123835;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=AC00_RS0123835;old_locus_tag=AC00_0444 NZ_JJLU01000020.1 Protein Homology CDS 27918 28367 . + 0 ID=cds-WP_000543535.1;Parent=gene-AC00_RS0123835;Dbxref=GenBank:WP_000543535.1;Name=WP_000543535.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=AC00_RS0123835;product=transcriptional regulator NrdR;protein_id=WP_000543535.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 28371 29474 . + . ID=gene-AC00_RS21680;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AC00_RS21680;old_locus_tag=AC00_0445 NZ_JJLU01000020.1 Protein Homology CDS 28371 29474 . + 0 ID=cds-WP_032280391.1;Parent=gene-AC00_RS21680;Dbxref=GenBank:WP_032280391.1;Name=WP_032280391.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414948.1;locus_tag=AC00_RS21680;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_032280391.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 29563 30033 . + . ID=gene-AC00_RS21675;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AC00_RS21675;old_locus_tag=AC00_0446 NZ_JJLU01000020.1 Protein Homology CDS 29563 30033 . + 0 ID=cds-WP_001021161.1;Parent=gene-AC00_RS21675;Dbxref=GenBank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=AC00_RS21675;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 30053 30472 . + . ID=gene-AC00_RS21670;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AC00_RS21670;old_locus_tag=AC00_0447 NZ_JJLU01000020.1 Protein Homology CDS 30053 30472 . + 0 ID=cds-WP_000801125.1;Parent=gene-AC00_RS21670;Dbxref=GenBank:WP_000801125.1;Name=WP_000801125.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308496.1;locus_tag=AC00_RS21670;product=transcription antitermination factor NusB;protein_id=WP_000801125.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 30550 31527 . + . ID=gene-AC00_RS21665;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=AC00_RS21665;old_locus_tag=AC00_0448 NZ_JJLU01000020.1 Protein Homology CDS 30550 31527 . + 0 ID=cds-WP_032280392.1;Parent=gene-AC00_RS21665;Dbxref=GenBank:WP_032280392.1;Name=WP_032280392.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414951.1;locus_tag=AC00_RS21665;product=thiamine-phosphate kinase;protein_id=WP_032280392.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 31505 32020 . + . ID=gene-AC00_RS21660;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=AC00_RS21660;old_locus_tag=AC00_0449 NZ_JJLU01000020.1 Protein Homology CDS 31505 32020 . + 0 ID=cds-WP_000154043.1;Parent=gene-AC00_RS21660;Dbxref=GenBank:WP_000154043.1;Name=WP_000154043.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308498.1;locus_tag=AC00_RS21660;product=phosphatidylglycerophosphatase A;protein_id=WP_000154043.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 32198 33769 . - . ID=gene-AC00_RS21655;Name=espY3;gbkey=Gene;gene=espY3;gene_biotype=protein_coding;locus_tag=AC00_RS21655;old_locus_tag=AC00_0450 NZ_JJLU01000020.1 Protein Homology CDS 32198 33769 . - 0 ID=cds-WP_032280393.1;Parent=gene-AC00_RS21655;Dbxref=GenBank:WP_032280393.1;Name=WP_032280393.1;gbkey=CDS;gene=espY3;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308499.1;locus_tag=AC00_RS21655;product=T3SS effector pentapeptide repeat protein EspY3;protein_id=WP_032280393.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 34000 34974 . - . ID=gene-AC00_RS21650;Name=yajO;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=AC00_RS21650;old_locus_tag=AC00_0451 NZ_JJLU01000020.1 Protein Homology CDS 34000 34974 . - 0 ID=cds-WP_001199835.1;Parent=gene-AC00_RS21650;Dbxref=GenBank:WP_001199835.1;Name=WP_001199835.1;gbkey=CDS;gene=yajO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308500.1;locus_tag=AC00_RS21650;product=1-deoxyxylulose-5-phosphate synthase YajO;protein_id=WP_001199835.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 35029 36891 . - . ID=gene-AC00_RS21645;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AC00_RS21645;old_locus_tag=AC00_0452 NZ_JJLU01000020.1 Protein Homology CDS 35029 36891 . - 0 ID=cds-WP_032280396.1;Parent=gene-AC00_RS21645;Dbxref=GenBank:WP_032280396.1;Name=WP_032280396.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308501.1;locus_tag=AC00_RS21645;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_032280396.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 36916 37815 . - . ID=gene-AC00_RS21640;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=AC00_RS21640;old_locus_tag=AC00_0453 NZ_JJLU01000020.1 Protein Homology CDS 36916 37815 . - 0 ID=cds-WP_000347221.1;Parent=gene-AC00_RS21640;Dbxref=GenBank:WP_000347221.1;Name=WP_000347221.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414955.1;locus_tag=AC00_RS21640;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_000347221.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 37815 38057 . - . ID=gene-AC00_RS21635;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AC00_RS21635;old_locus_tag=AC00_0454 NZ_JJLU01000020.1 Protein Homology CDS 37815 38057 . - 0 ID=cds-WP_001124935.1;Parent=gene-AC00_RS21635;Dbxref=GenBank:WP_001124935.1;Name=WP_001124935.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=AC00_RS21635;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001124935.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 38263 39711 . + . ID=gene-AC00_RS21630;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=AC00_RS21630;old_locus_tag=AC00_0455 NZ_JJLU01000020.1 Protein Homology CDS 38263 39711 . + 0 ID=cds-WP_000668703.1;Parent=gene-AC00_RS21630;Dbxref=GenBank:WP_000668703.1;Name=WP_000668703.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=AC00_RS21630;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_000668703.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 39765 40355 . - . ID=gene-AC00_RS21625;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=AC00_RS21625;old_locus_tag=AC00_0456 NZ_JJLU01000020.1 Protein Homology CDS 39765 40355 . - 0 ID=cds-WP_001276309.1;Parent=gene-AC00_RS21625;Dbxref=GenBank:WP_001276309.1;Name=WP_001276309.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308505.2;locus_tag=AC00_RS21625;product=protein deglycase YajL;protein_id=WP_001276309.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 40318 41229 . - . ID=gene-AC00_RS21620;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=AC00_RS21620;old_locus_tag=AC00_0457 NZ_JJLU01000020.1 Protein Homology CDS 40318 41229 . - 0 ID=cds-WP_000705869.1;Parent=gene-AC00_RS21620;Dbxref=GenBank:WP_000705869.1;Name=WP_000705869.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=AC00_RS21620;product=2-dehydropantoate 2-reductase;protein_id=WP_000705869.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 41397 41888 . + . ID=gene-AC00_RS21615;Name=yajQ;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=AC00_RS21615;old_locus_tag=AC00_0458 NZ_JJLU01000020.1 Protein Homology CDS 41397 41888 . + 0 ID=cds-WP_001138904.1;Parent=gene-AC00_RS21615;Dbxref=GenBank:WP_001138904.1;Name=WP_001138904.1;gbkey=CDS;gene=yajQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414960.2;locus_tag=AC00_RS21615;product=nucleotide binding protein YajQ;protein_id=WP_001138904.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 42016 43380 . - . ID=gene-AC00_RS21610;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=AC00_RS21610;old_locus_tag=AC00_0459 NZ_JJLU01000020.1 Protein Homology CDS 42016 43380 . - 0 ID=cds-WP_001000956.1;Parent=gene-AC00_RS21610;Dbxref=GenBank:WP_001000956.1;Name=WP_001000956.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yajR;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308508.2;locus_tag=AC00_RS21610;product=MFS transporter;protein_id=WP_001000956.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 43787 44722 . + . ID=gene-AC00_RS21605;Name=AC00_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21605;old_locus_tag=AC00_0460 NZ_JJLU01000020.1 Protein Homology CDS 43787 44722 . + 0 ID=cds-WP_032280441.1;Parent=gene-AC00_RS21605;Dbxref=GenBank:WP_032280441.1;Name=WP_032280441.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001427098.1;locus_tag=AC00_RS21605;product=tetratricopeptide repeat protein;protein_id=WP_032280441.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 44778 45320 . - . ID=gene-AC00_RS21600;Name=AC00_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21600;old_locus_tag=AC00_0461 NZ_JJLU01000020.1 Protein Homology CDS 44778 45320 . - 0 ID=cds-WP_032170811.1;Parent=gene-AC00_RS21600;Dbxref=GenBank:WP_032170811.1;Name=WP_032170811.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000227782.1;locus_tag=AC00_RS21600;product=GNAT family N-acetyltransferase;protein_id=WP_032170811.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 45304 45615 . - . ID=gene-AC00_RS21595;Name=AC00_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21595;old_locus_tag=AC00_0462 NZ_JJLU01000020.1 Protein Homology CDS 45304 45615 . - 0 ID=cds-WP_001577859.1;Parent=gene-AC00_RS21595;Dbxref=GenBank:WP_001577859.1;Name=WP_001577859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706319.2;locus_tag=AC00_RS21595;product=DUF1778 domain-containing protein;protein_id=WP_001577859.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 45800 46690 . - . ID=gene-AC00_RS21590;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AC00_RS21590;old_locus_tag=AC00_0463 NZ_JJLU01000020.1 Protein Homology CDS 45800 46690 . - 0 ID=cds-WP_000971336.1;Parent=gene-AC00_RS21590;Dbxref=GenBank:WP_000971336.1;Name=WP_000971336.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308509.1;locus_tag=AC00_RS21590;product=heme o synthase;protein_id=WP_000971336.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 46702 47031 . - . ID=gene-AC00_RS21585;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AC00_RS21585;old_locus_tag=AC00_0464 NZ_JJLU01000020.1 Protein Homology CDS 46702 47031 . - 0 ID=cds-WP_000019869.1;Parent=gene-AC00_RS21585;Dbxref=GenBank:WP_000019869.1;Name=WP_000019869.1;gbkey=CDS;gene=cyoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=AC00_RS21585;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_000019869.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 47031 47645 . - . ID=gene-AC00_RS21580;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AC00_RS21580;old_locus_tag=AC00_0465 NZ_JJLU01000020.1 Protein Homology CDS 47031 47645 . - 0 ID=cds-WP_032280399.1;Parent=gene-AC00_RS21580;Dbxref=GenBank:WP_032280399.1;Name=WP_032280399.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;gene=cyoC;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=AC00_RS21580;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_032280399.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 47635 49626 . - . ID=gene-AC00_RS21575;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AC00_RS21575;old_locus_tag=AC00_0466 NZ_JJLU01000020.1 Protein Homology CDS 47635 49626 . - 0 ID=cds-WP_000467180.1;Parent=gene-AC00_RS21575;Dbxref=GenBank:WP_000467180.1;Name=WP_000467180.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=AC00_RS21575;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_000467180.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 49648 50595 . - . ID=gene-AC00_RS21570;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AC00_RS21570;old_locus_tag=AC00_0467 NZ_JJLU01000020.1 Protein Homology CDS 49648 50595 . - 0 ID=cds-WP_001239436.1;Parent=gene-AC00_RS21570;Dbxref=GenBank:WP_001239436.1;Name=WP_001239436.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=AC00_RS21570;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_001239436.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 51055 52530 . - . ID=gene-AC00_RS21565;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=AC00_RS21565;old_locus_tag=AC00_0468 NZ_JJLU01000020.1 Protein Homology CDS 51055 52530 . - 0 ID=cds-WP_000098445.1;Parent=gene-AC00_RS21565;Dbxref=GenBank:WP_000098445.1;Name=WP_000098445.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308514.1;locus_tag=AC00_RS21565;product=muropeptide MFS transporter AmpG;protein_id=WP_000098445.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 52574 53152 . - . ID=gene-AC00_RS21560;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=AC00_RS21560;old_locus_tag=AC00_0469 NZ_JJLU01000020.1 Protein Homology CDS 52574 53152 . - 0 ID=cds-WP_001295326.1;Parent=gene-AC00_RS21560;Dbxref=GenBank:WP_001295326.1;Name=WP_001295326.1;gbkey=CDS;gene=yajG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414968.4;locus_tag=AC00_RS21560;product=lipoprotein;protein_id=WP_001295326.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 53457 53774 . + . ID=gene-AC00_RS21555;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=AC00_RS21555;old_locus_tag=AC00_0471 NZ_JJLU01000020.1 Protein Homology CDS 53457 53774 . + 0 ID=cds-WP_000973448.1;Parent=gene-AC00_RS21555;Dbxref=GenBank:WP_000973448.1;Name=WP_000973448.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=AC00_RS21555;product=transcriptional regulator BolA;protein_id=WP_000973448.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 54118 55416 . + . ID=gene-AC00_RS21545;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AC00_RS21545;old_locus_tag=AC00_0473 NZ_JJLU01000020.1 Protein Homology CDS 54118 55416 . + 0 ID=cds-WP_001198386.1;Parent=gene-AC00_RS21545;Dbxref=GenBank:WP_001198386.1;Name=WP_001198386.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=AC00_RS21545;product=trigger factor;protein_id=WP_001198386.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 55662 56285 . + . ID=gene-AC00_RS21540;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AC00_RS21540;old_locus_tag=AC00_0474 NZ_JJLU01000020.1 Protein Homology CDS 55662 56285 . + 0 ID=cds-WP_000122253.1;Parent=gene-AC00_RS21540;Dbxref=GenBank:WP_000122253.1;Name=WP_000122253.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=AC00_RS21540;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_000122253.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 56411 57685 . + . ID=gene-AC00_RS21535;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AC00_RS21535;old_locus_tag=AC00_0475 NZ_JJLU01000020.1 Protein Homology CDS 56411 57685 . + 0 ID=cds-WP_000130305.1;Parent=gene-AC00_RS21535;Dbxref=GenBank:WP_000130305.1;Name=WP_000130305.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=AC00_RS21535;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_000130305.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 57873 60227 . + . ID=gene-AC00_RS21530;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AC00_RS21530;old_locus_tag=AC00_0476 NZ_JJLU01000020.1 Protein Homology CDS 57873 60227 . + 0 ID=cds-WP_001295325.1;Parent=gene-AC00_RS21530;Dbxref=GenBank:WP_001295325.1;Name=WP_001295325.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=AC00_RS21530;product=endopeptidase La;protein_id=WP_001295325.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 60418 60708 . + . ID=gene-AC00_RS21525;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=AC00_RS21525;old_locus_tag=AC00_0477 NZ_JJLU01000020.1 Protein Homology CDS 60418 60708 . + 0 ID=cds-WP_254892905.1;Parent=gene-AC00_RS21525;Dbxref=GenBank:WP_254892905.1;Name=WP_254892905.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356995.1;locus_tag=AC00_RS21525;product=nucleoid-associated protein HU-beta;protein_id=WP_254892905.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 60900 62771 . + . ID=gene-AC00_RS21520;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=AC00_RS21520;old_locus_tag=AC00_0478 NZ_JJLU01000020.1 Protein Homology CDS 60900 62771 . + 0 ID=cds-WP_032288158.1;Parent=gene-AC00_RS21520;Dbxref=GenBank:WP_032288158.1;Name=WP_032288158.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414975.1;locus_tag=AC00_RS21520;product=peptidylprolyl isomerase;protein_id=WP_032288158.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 62922 63293 . + . ID=gene-AC00_RS21515;Name=ybaV;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=AC00_RS21515;old_locus_tag=AC00_0479 NZ_JJLU01000020.1 Protein Homology CDS 62922 63293 . + 0 ID=cds-WP_000680294.1;Parent=gene-AC00_RS21515;Dbxref=GenBank:WP_000680294.1;Name=WP_000680294.1;gbkey=CDS;gene=ybaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414976.1;locus_tag=AC00_RS21515;product=helix-hairpin-helix domain-containing protein;protein_id=WP_000680294.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 63399 63797 . + . ID=gene-AC00_RS21510;Name=fadM;gbkey=Gene;gene=fadM;gene_biotype=protein_coding;locus_tag=AC00_RS21510;old_locus_tag=AC00_0480 NZ_JJLU01000020.1 Protein Homology CDS 63399 63797 . + 0 ID=cds-WP_001194525.1;Parent=gene-AC00_RS21510;Dbxref=GenBank:WP_001194525.1;Name=WP_001194525.1;gbkey=CDS;gene=fadM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308524.1;locus_tag=AC00_RS21510;product=long-chain acyl-CoA thioesterase FadM;protein_id=WP_001194525.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 63849 64544 . - . ID=gene-AC00_RS21505;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=AC00_RS21505;old_locus_tag=AC00_0481 NZ_JJLU01000020.1 Protein Homology CDS 63849 64544 . - 0 ID=cds-WP_000817227.1;Parent=gene-AC00_RS21505;Dbxref=GenBank:WP_000817227.1;Name=WP_000817227.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308525.1;locus_tag=AC00_RS21505;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_000817227.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 64609 66309 . - . ID=gene-AC00_RS21500;Name=ybaE;gbkey=Gene;gene=ybaE;gene_biotype=protein_coding;locus_tag=AC00_RS21500;old_locus_tag=AC00_0482 NZ_JJLU01000020.1 Protein Homology CDS 64609 66309 . - 0 ID=cds-WP_032280404.1;Parent=gene-AC00_RS21500;Dbxref=GenBank:WP_032280404.1;Name=WP_032280404.1;gbkey=CDS;gene=ybaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308526.1;locus_tag=AC00_RS21500;product=SgrR family transcriptional regulator;protein_id=WP_032280404.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 66409 67227 . + . ID=gene-AC00_RS21495;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=AC00_RS21495;old_locus_tag=AC00_0483 NZ_JJLU01000020.1 Protein Homology CDS 66409 67227 . + 0 ID=cds-WP_032280405.1;Parent=gene-AC00_RS21495;Dbxref=GenBank:WP_032280405.1;Name=WP_032280405.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308527.2;locus_tag=AC00_RS21495;product=HMP-PP phosphatase;protein_id=WP_032280405.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 67380 67838 . + . ID=gene-AC00_RS21490;Name=decR;gbkey=Gene;gene=decR;gene_biotype=protein_coding;locus_tag=AC00_RS21490;old_locus_tag=AC00_0484 NZ_JJLU01000020.1 Protein Homology CDS 67380 67838 . + 0 ID=cds-WP_000884589.1;Parent=gene-AC00_RS21490;Dbxref=GenBank:WP_000884589.1;Name=WP_000884589.1;gbkey=CDS;gene=decR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308528.2;locus_tag=AC00_RS21490;product=DNA-binding transcriptional regulator DecR;protein_id=WP_000884589.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 67868 69640 . + . ID=gene-AC00_RS21485;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=AC00_RS21485;old_locus_tag=AC00_0485 NZ_JJLU01000020.1 Protein Homology CDS 67868 69640 . + 0 ID=cds-WP_032280406.1;Parent=gene-AC00_RS21485;Dbxref=GenBank:WP_032280406.1;Name=WP_032280406.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308529.1;locus_tag=AC00_RS21485;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_032280406.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 69633 71414 . + . ID=gene-AC00_RS21480;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=AC00_RS21480;old_locus_tag=AC00_0486 NZ_JJLU01000020.1 Protein Homology CDS 69633 71414 . + 0 ID=cds-WP_032280407.1;Parent=gene-AC00_RS21480;Dbxref=GenBank:WP_032280407.1;Name=WP_032280407.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=mdlB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=AC00_RS21480;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_032280407.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 71595 71933 . + . ID=gene-AC00_RS21475;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=AC00_RS21475;old_locus_tag=AC00_0488 NZ_JJLU01000020.1 Protein Homology CDS 71595 71933 . + 0 ID=cds-WP_000780338.1;Parent=gene-AC00_RS21475;Dbxref=GenBank:WP_000780338.1;Name=WP_000780338.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308531.1;locus_tag=AC00_RS21475;product=P-II family nitrogen regulator;protein_id=WP_000780338.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 71963 73249 . + . ID=gene-AC00_RS21470;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=AC00_RS21470;old_locus_tag=AC00_0489 NZ_JJLU01000020.1 Protein Homology CDS 71963 73249 . + 0 ID=cds-WP_000685029.1;Parent=gene-AC00_RS21470;Dbxref=GenBank:WP_000685029.1;Name=WP_000685029.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=AC00_RS21470;product=ammonium transporter AmtB;protein_id=WP_000685029.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 73298 74158 . - . ID=gene-AC00_RS21465;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=AC00_RS21465;old_locus_tag=AC00_0490 NZ_JJLU01000020.1 Protein Homology CDS 73298 74158 . - 0 ID=cds-WP_000075876.1;Parent=gene-AC00_RS21465;Dbxref=GenBank:WP_000075876.1;Name=WP_000075876.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308533.1;locus_tag=AC00_RS21465;product=acyl-CoA thioesterase II;protein_id=WP_000075876.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 74376 74948 . + . ID=gene-AC00_RS21460;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=AC00_RS21460;old_locus_tag=AC00_0492 NZ_JJLU01000020.1 Protein Homology CDS 74376 74948 . + 0 ID=cds-WP_032280408.1;Parent=gene-AC00_RS21460;Dbxref=GenBank:WP_032280408.1;Name=WP_032280408.1;gbkey=CDS;gene=ybaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706347.1;locus_tag=AC00_RS21460;product=YbaY family lipoprotein;protein_id=WP_032280408.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 74979 75290 . - . ID=gene-AC00_RS21455;Name=AC00_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21455;old_locus_tag=AC00_0493 NZ_JJLU01000020.1 Protein Homology CDS 74979 75290 . - 0 ID=cds-WP_001398712.1;Parent=gene-AC00_RS21455;Dbxref=GenBank:WP_001398712.1;Name=WP_001398712.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706349.2;locus_tag=AC00_RS21455;product=MGMT family protein;protein_id=WP_001398712.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 75453 75549 . + . ID=gene-AC00_RS26725;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AC00_RS26725 NZ_JJLU01000020.1 cmsearch SRP_RNA 75453 75549 . + . ID=rna-AC00_RS26725;Parent=gene-AC00_RS26725;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26725;product=signal recognition particle sRNA small type NZ_JJLU01000020.1 cmsearch exon 75453 75549 . + . ID=exon-AC00_RS26725-1;Parent=rna-AC00_RS26725;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26725;product=signal recognition particle sRNA small type NZ_JJLU01000020.1 RefSeq gene 75669 76022 . + . ID=gene-AC00_RS21450;Name=ybaA;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=AC00_RS21450;old_locus_tag=AC00_0494 NZ_JJLU01000020.1 Protein Homology CDS 75669 76022 . + 0 ID=cds-WP_000878140.1;Parent=gene-AC00_RS21450;Dbxref=GenBank:WP_000878140.1;Name=WP_000878140.1;gbkey=CDS;gene=ybaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308536.1;locus_tag=AC00_RS21450;product=DUF1428 domain-containing protein;protein_id=WP_000878140.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 76064 77614 . - . ID=gene-AC00_RS21445;Name=pdeB;gbkey=Gene;gene=pdeB;gene_biotype=protein_coding;locus_tag=AC00_RS21445;old_locus_tag=AC00_0495 NZ_JJLU01000020.1 Protein Homology CDS 76064 77614 . - 0 ID=cds-WP_032280442.1;Parent=gene-AC00_RS21445;Dbxref=GenBank:WP_032280442.1;Name=WP_032280442.1;gbkey=CDS;gene=pdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308537.2;locus_tag=AC00_RS21445;product=cyclic-guanylate-specific phosphodiesterase PdeB;protein_id=WP_032280442.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 77778 78248 . - . ID=gene-AC00_RS21440;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=AC00_RS21440;old_locus_tag=AC00_0496 NZ_JJLU01000020.1 Protein Homology CDS 77778 78248 . - 0 ID=cds-WP_000136192.1;Parent=gene-AC00_RS21440;Dbxref=GenBank:WP_000136192.1;Name=WP_000136192.1;gbkey=CDS;gene=ylaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308538.2;locus_tag=AC00_RS21440;product=YlaC family protein;protein_id=WP_000136192.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 78364 78915 . - . ID=gene-AC00_RS21435;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=AC00_RS21435;old_locus_tag=AC00_0497 NZ_JJLU01000020.1 Protein Homology CDS 78364 78915 . - 0 ID=cds-WP_000102564.1;Parent=gene-AC00_RS21435;Dbxref=GenBank:WP_000102564.1;Name=WP_000102564.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414992.1;locus_tag=AC00_RS21435;product=maltose O-acetyltransferase;protein_id=WP_000102564.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 79087 79305 . - . ID=gene-AC00_RS21430;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AC00_RS21430;old_locus_tag=AC00_0498 NZ_JJLU01000020.1 Protein Homology CDS 79087 79305 . - 0 ID=cds-WP_001291435.1;Parent=gene-AC00_RS21430;Dbxref=GenBank:WP_001291435.1;Name=WP_001291435.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=AC00_RS21430;product=HHA domain-containing protein;protein_id=WP_001291435.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 79331 79705 . - . ID=gene-AC00_RS21425;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=AC00_RS21425;old_locus_tag=AC00_0499 NZ_JJLU01000020.1 Protein Homology CDS 79331 79705 . - 0 ID=cds-WP_000344800.1;Parent=gene-AC00_RS21425;Dbxref=GenBank:WP_000344800.1;Name=WP_000344800.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=AC00_RS21425;product=Hha toxicity modulator TomB;protein_id=WP_000344800.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 80251 83400 . - . ID=gene-AC00_RS21420;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=AC00_RS21420;old_locus_tag=AC00_0500 NZ_JJLU01000020.1 Protein Homology CDS 80251 83400 . - 0 ID=cds-WP_001132469.1;Parent=gene-AC00_RS21420;Dbxref=GenBank:WP_001132469.1;Name=WP_001132469.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414995.1;locus_tag=AC00_RS21420;product=efflux RND transporter permease AcrB;protein_id=WP_001132469.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 83423 84616 . - . ID=gene-AC00_RS21415;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=AC00_RS21415;old_locus_tag=AC00_0501 NZ_JJLU01000020.1 Protein Homology CDS 83423 84616 . - 0 ID=cds-WP_001295324.1;Parent=gene-AC00_RS21415;Dbxref=GenBank:WP_001295324.1;Name=WP_001295324.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=AC00_RS21415;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_001295324.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 84758 85405 . + . ID=gene-AC00_RS21410;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=AC00_RS21410;old_locus_tag=AC00_0502 NZ_JJLU01000020.1 Protein Homology CDS 84758 85405 . + 0 ID=cds-WP_000101737.1;Parent=gene-AC00_RS21410;Dbxref=GenBank:WP_000101737.1;Name=WP_000101737.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414997.1;locus_tag=AC00_RS21410;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_000101737.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 85533 88892 . + . ID=gene-AC00_RS21405;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=AC00_RS21405;old_locus_tag=AC00_0503 NZ_JJLU01000020.1 Protein Homology CDS 85533 88892 . + 0 ID=cds-WP_032288159.1;Parent=gene-AC00_RS21405;Dbxref=GenBank:WP_032288159.1;Name=WP_032288159.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308545.1;locus_tag=AC00_RS21405;product=mechanosensitive channel MscK;protein_id=WP_032288159.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 88931 89095 . - . ID=gene-AC00_RS21400;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=AC00_RS21400;old_locus_tag=AC00_0504 NZ_JJLU01000020.1 Protein Homology CDS 88931 89095 . - 0 ID=cds-WP_000051151.1;Parent=gene-AC00_RS21400;Dbxref=GenBank:WP_000051151.1;Name=WP_000051151.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308546.1;locus_tag=AC00_RS21400;product=pleiotropic regulatory protein RsmS;protein_id=WP_000051151.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 89109 89636 . - . ID=gene-AC00_RS21395;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=AC00_RS21395;old_locus_tag=AC00_0505 NZ_JJLU01000020.1 Protein Homology CDS 89109 89636 . - 0 ID=cds-WP_000844874.1;Parent=gene-AC00_RS21395;Dbxref=GenBank:WP_000844874.1;Name=WP_000844874.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415000.1;locus_tag=AC00_RS21395;product=primosomal replication protein N'';protein_id=WP_000844874.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 89706 90083 . + . ID=gene-AC00_RS21390;Name=ybaN;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=AC00_RS21390;old_locus_tag=AC00_0506 NZ_JJLU01000020.1 Protein Homology CDS 89706 90083 . + 0 ID=cds-WP_001188905.1;Parent=gene-AC00_RS21390;Dbxref=GenBank:WP_001188905.1;Name=WP_001188905.1;gbkey=CDS;gene=ybaN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308548.1;locus_tag=AC00_RS21390;product=DUF454 family protein;protein_id=WP_001188905.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 90236 90787 . + . ID=gene-AC00_RS21385;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=AC00_RS21385;old_locus_tag=AC00_0507 NZ_JJLU01000020.1 Protein Homology CDS 90236 90787 . + 0 ID=cds-WP_000127356.1;Parent=gene-AC00_RS21385;Dbxref=GenBank:WP_000127356.1;Name=WP_000127356.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=AC00_RS21385;product=adenine phosphoribosyltransferase;protein_id=WP_000127356.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 90916 92847 . + . ID=gene-AC00_RS21380;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AC00_RS21380;old_locus_tag=AC00_0508 NZ_JJLU01000020.1 Protein Homology CDS 90916 92847 . + 0 ID=cds-WP_032280410.1;Parent=gene-AC00_RS21380;Dbxref=GenBank:WP_032280410.1;Name=WP_032280410.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415003.1;locus_tag=AC00_RS21380;product=DNA polymerase III subunit gamma/tau;protein_id=WP_032280410.1;transl_table=11 NZ_JJLU01000020.1 cmsearch sequence_feature 92180 92244 . + . ID=id-AC00_RS21380;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS21380 NZ_JJLU01000020.1 RefSeq gene 92900 93229 . + . ID=gene-AC00_RS21375;Name=ybaB;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=AC00_RS21375;old_locus_tag=AC00_0509 NZ_JJLU01000020.1 Protein Homology CDS 92900 93229 . + 0 ID=cds-WP_000467098.1;Parent=gene-AC00_RS21375;Dbxref=GenBank:WP_000467098.1;Name=WP_000467098.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaB;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=AC00_RS21375;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_000467098.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 93229 93834 . + . ID=gene-AC00_RS21370;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AC00_RS21370;old_locus_tag=AC00_0510 NZ_JJLU01000020.1 Protein Homology CDS 93229 93834 . + 0 ID=cds-WP_001195025.1;Parent=gene-AC00_RS21370;Dbxref=GenBank:WP_001195025.1;Name=WP_001195025.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308552.1;locus_tag=AC00_RS21370;product=recombination mediator RecR;protein_id=WP_001195025.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 93944 95818 . + . ID=gene-AC00_RS21365;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AC00_RS21365;old_locus_tag=AC00_0511 NZ_JJLU01000020.1 Protein Homology CDS 93944 95818 . + 0 ID=cds-WP_000678201.1;Parent=gene-AC00_RS21365;Dbxref=GenBank:WP_000678201.1;Name=WP_000678201.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=AC00_RS21365;product=molecular chaperone HtpG;protein_id=WP_000678201.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 95999 96643 . + . ID=gene-AC00_RS21360;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AC00_RS21360;old_locus_tag=AC00_0512 NZ_JJLU01000020.1 Protein Homology CDS 95999 96643 . + 0 ID=cds-WP_001220233.1;Parent=gene-AC00_RS21360;Dbxref=GenBank:WP_001220233.1;Name=WP_001220233.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=AC00_RS21360;product=adenylate kinase;protein_id=WP_001220233.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 96775 97737 . + . ID=gene-AC00_RS21355;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AC00_RS21355;old_locus_tag=AC00_0513 NZ_JJLU01000020.1 Protein Homology CDS 96775 97737 . + 0 ID=cds-WP_032280411.1;Parent=gene-AC00_RS21355;Dbxref=GenBank:WP_032280411.1;Name=WP_032280411.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308555.1;locus_tag=AC00_RS21355;product=ferrochelatase;protein_id=WP_032280411.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 97734 98693 . - . ID=gene-AC00_RS21350;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=AC00_RS21350;old_locus_tag=AC00_0514 NZ_JJLU01000020.1 Protein Homology CDS 97734 98693 . - 0 ID=cds-WP_032280412.1;Parent=gene-AC00_RS21350;Dbxref=GenBank:WP_032280412.1;Name=WP_032280412.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415009.1;locus_tag=AC00_RS21350;product=acetyl esterase;protein_id=WP_032280412.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 98845 100149 . + . ID=gene-AC00_RS21345;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=AC00_RS21345;old_locus_tag=AC00_0515 NZ_JJLU01000020.1 Protein Homology CDS 98845 100149 . + 0 ID=cds-WP_000671574.1;Parent=gene-AC00_RS21345;Dbxref=GenBank:WP_000671574.1;Name=WP_000671574.1;gbkey=CDS;gene=gsk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=AC00_RS21345;product=inosine/guanosine kinase;protein_id=WP_000671574.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 100277 100729 . + . ID=gene-AC00_RS21340;Name=AC00_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21340;old_locus_tag=AC00_0516 NZ_JJLU01000020.1 Protein Homology CDS 100277 100729 . + 0 ID=cds-WP_032280413.1;Parent=gene-AC00_RS21340;Dbxref=GenBank:WP_032280413.1;Name=WP_032280413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000758424.1;locus_tag=AC00_RS21340;product=hypothetical protein;protein_id=WP_032280413.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 100823 102499 . - . ID=gene-AC00_RS21335;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=AC00_RS21335;old_locus_tag=AC00_0517 NZ_JJLU01000020.1 Protein Homology CDS 100823 102499 . - 0 ID=cds-WP_000546224.1;Parent=gene-AC00_RS21335;Dbxref=GenBank:WP_000546224.1;Name=WP_000546224.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308558.1;locus_tag=AC00_RS21335;product=YbaL family putative K(+) efflux transporter;protein_id=WP_000546224.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 102737 103957 . - . ID=gene-AC00_RS21330;Name=fsr;gbkey=Gene;gene=fsr;gene_biotype=protein_coding;locus_tag=AC00_RS21330;old_locus_tag=AC00_0518 NZ_JJLU01000020.1 Protein Homology CDS 102737 103957 . - 0 ID=cds-WP_032288160.1;Parent=gene-AC00_RS21330;Dbxref=GenBank:WP_032288160.1;Name=WP_032288160.1;gbkey=CDS;gene=fsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308559.1;locus_tag=AC00_RS21330;product=fosmidomycin MFS transporter;protein_id=WP_032288160.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 104175 105827 . + . ID=gene-AC00_RS21325;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=AC00_RS21325;old_locus_tag=AC00_0519 NZ_JJLU01000020.1 Protein Homology CDS 104175 105827 . + 0 ID=cds-WP_032280415.1;Parent=gene-AC00_RS21325;Dbxref=GenBank:WP_032280415.1;Name=WP_032280415.1;gbkey=CDS;gene=ushA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308560.1;locus_tag=AC00_RS21325;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WP_032280415.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 105864 106343 . - . ID=gene-AC00_RS21320;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=AC00_RS21320;old_locus_tag=AC00_0520 NZ_JJLU01000020.1 Protein Homology CDS 105864 106343 . - 0 ID=cds-WP_000186631.1;Parent=gene-AC00_RS21320;Dbxref=GenBank:WP_000186631.1;Name=WP_000186631.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=AC00_RS21320;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_000186631.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 106547 107341 . - . ID=gene-AC00_RS21315;Name=ybaP;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=AC00_RS21315;old_locus_tag=AC00_0521 NZ_JJLU01000020.1 Protein Homology CDS 106547 107341 . - 0 ID=cds-WP_000365177.1;Parent=gene-AC00_RS21315;Dbxref=GenBank:WP_000365177.1;Name=WP_000365177.1;Ontology_term=GO:0008233;gbkey=CDS;gene=ybaP;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415015.1;locus_tag=AC00_RS21315;product=TraB/GumN family protein;protein_id=WP_000365177.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 107479 107820 . + . ID=gene-AC00_RS21310;Name=ybaQ;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=AC00_RS21310;old_locus_tag=AC00_0522 NZ_JJLU01000020.1 Protein Homology CDS 107479 107820 . + 0 ID=cds-WP_001370330.1;Parent=gene-AC00_RS21310;Dbxref=GenBank:WP_001370330.1;Name=WP_001370330.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ybaQ;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415016.4;locus_tag=AC00_RS21310;product=HigA family addiction module antitoxin;protein_id=WP_001370330.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 108035 110539 . - . ID=gene-AC00_RS21305;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=AC00_RS21305;old_locus_tag=AC00_0523 NZ_JJLU01000020.1 Protein Homology CDS 108035 110539 . - 0 ID=cds-WP_032288161.1;Parent=gene-AC00_RS21305;Dbxref=GenBank:WP_032288161.1;Name=WP_032288161.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308564.1;locus_tag=AC00_RS21305;product=copper-exporting P-type ATPase CopA;protein_id=WP_032288161.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 110801 111733 . + . ID=gene-AC00_RS21300;Name=glsA;gbkey=Gene;gene=glsA;gene_biotype=protein_coding;locus_tag=AC00_RS21300;old_locus_tag=AC00_0524 NZ_JJLU01000020.1 Protein Homology CDS 110801 111733 . + 0 ID=cds-WP_032280417.1;Parent=gene-AC00_RS21300;Dbxref=GenBank:WP_032280417.1;Name=WP_032280417.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsA;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308565.1;locus_tag=AC00_RS21300;product=glutaminase A;protein_id=WP_032280417.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 111736 113028 . + . ID=gene-AC00_RS21295;Name=ybaT;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=AC00_RS21295;old_locus_tag=AC00_0525 NZ_JJLU01000020.1 Protein Homology CDS 111736 113028 . + 0 ID=cds-WP_000982170.1;Parent=gene-AC00_RS21295;Dbxref=GenBank:WP_000982170.1;Name=WP_000982170.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ybaT;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308566.1;locus_tag=AC00_RS21295;product=APC family permease;protein_id=WP_000982170.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 113366 114721 . + . ID=gene-AC00_RS21290;Name=AC00_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21290;old_locus_tag=AC00_0526 NZ_JJLU01000020.1 Protein Homology CDS 113366 114721 . + 0 ID=cds-WP_000090494.1;Parent=gene-AC00_RS21290;Dbxref=GenBank:WP_000090494.1;Name=WP_000090494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308567.1;locus_tag=AC00_RS21290;product=TolC family outer membrane protein;protein_id=WP_000090494.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 114823 134406 . + . ID=gene-AC00_RS21285;Name=siiEA;gbkey=Gene;gene=siiEA;gene_biotype=protein_coding;locus_tag=AC00_RS21285;old_locus_tag=AC00_0527 NZ_JJLU01000020.1 Protein Homology CDS 114823 134406 . + 0 ID=cds-WP_032288162.1;Parent=gene-AC00_RS21285;Dbxref=GenBank:WP_032288162.1;Name=WP_032288162.1;gbkey=CDS;gene=siiEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052477.1;locus_tag=AC00_RS21285;product=BapA-related adhesin SiiEA;protein_id=WP_032288162.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 134410 136572 . + . ID=gene-AC00_RS21280;Name=AC00_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21280;old_locus_tag=AC00_0528 NZ_JJLU01000020.1 Protein Homology CDS 134410 136572 . + 0 ID=cds-WP_032280419.1;Parent=gene-AC00_RS21280;Dbxref=GenBank:WP_032280419.1;Name=WP_032280419.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308570.2;locus_tag=AC00_RS21280;product=type I secretion system permease/ATPase;protein_id=WP_032280419.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 136569 137744 . + . ID=gene-AC00_RS21275;Name=AC00_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21275;old_locus_tag=AC00_0529 NZ_JJLU01000020.1 Protein Homology CDS 136569 137744 . + 0 ID=cds-WP_032280420.1;Parent=gene-AC00_RS21275;Dbxref=GenBank:WP_032280420.1;Name=WP_032280420.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308571.1;locus_tag=AC00_RS21275;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_032280420.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 137741 138148 . + . ID=gene-AC00_RS21270;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=AC00_RS21270;old_locus_tag=AC00_0530 NZ_JJLU01000020.1 Protein Homology CDS 137741 138148 . + 0 ID=cds-WP_001026752.1;Parent=gene-AC00_RS21270;Dbxref=GenBank:WP_001026752.1;Name=WP_001026752.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308572.1;locus_tag=AC00_RS21270;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_001026752.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 138152 138355 . - . ID=gene-AC00_RS21265;Name=AC00_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21265;old_locus_tag=AC00_0531 NZ_JJLU01000020.1 Protein Homology CDS 138152 138355 . - 0 ID=cds-WP_000664216.1;Parent=gene-AC00_RS21265;Dbxref=GenBank:WP_000664216.1;Name=WP_000664216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664216.1;locus_tag=AC00_RS21265;product=hypothetical protein;protein_id=WP_000664216.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 138352 138774 . - . ID=gene-AC00_RS21260;Name=AC00_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21260;old_locus_tag=AC00_0532 NZ_JJLU01000020.1 Protein Homology CDS 138352 138774 . - 0 ID=cds-WP_032280421.1;Parent=gene-AC00_RS21260;Dbxref=GenBank:WP_032280421.1;Name=WP_032280421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308573.1;locus_tag=AC00_RS21260;product=hypothetical protein;protein_id=WP_032280421.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 138860 139876 . - . ID=gene-AC00_RS21255;Name=AC00_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21255;old_locus_tag=AC00_0533 NZ_JJLU01000020.1 Protein Homology CDS 138860 139876 . - 0 ID=cds-WP_032280422.1;Parent=gene-AC00_RS21255;Dbxref=GenBank:WP_032280422.1;Name=WP_032280422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308575.1;locus_tag=AC00_RS21255;product=YadA family autotransporter adhesin;protein_id=WP_032280422.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 140243 140605 . + . ID=gene-AC00_RS21250;Name=AC00_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21250;old_locus_tag=AC00_0535 NZ_JJLU01000020.1 Protein Homology CDS 140243 140605 . + 0 ID=cds-WP_001001644.1;Parent=gene-AC00_RS21250;Dbxref=GenBank:WP_001001644.1;Name=WP_001001644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308576.1;locus_tag=AC00_RS21250;product=hypothetical protein;protein_id=WP_001001644.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 140708 141166 . - . ID=gene-AC00_RS21245;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=AC00_RS21245;old_locus_tag=AC00_0536 NZ_JJLU01000020.1 Protein Homology CDS 140708 141166 . - 0 ID=cds-WP_032217866.1;Parent=gene-AC00_RS21245;Dbxref=GenBank:WP_032217866.1;Name=WP_032217866.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybbJ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308578.2;locus_tag=AC00_RS21245;product=NfeD family protein;protein_id=WP_032217866.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 141163 142080 . - . ID=gene-AC00_RS21240;Name=qmcA;gbkey=Gene;gene=qmcA;gene_biotype=protein_coding;locus_tag=AC00_RS21240;old_locus_tag=AC00_0537 NZ_JJLU01000020.1 Protein Homology CDS 141163 142080 . - 0 ID=cds-WP_032280424.1;Parent=gene-AC00_RS21240;Dbxref=GenBank:WP_032280424.1;Name=WP_032280424.1;Ontology_term=GO:0016020;gbkey=CDS;gene=qmcA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308579.1;locus_tag=AC00_RS21240;product=SPFH domain-containing protein;protein_id=WP_032280424.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 142226 142903 . + . ID=gene-AC00_RS21235;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=AC00_RS21235;old_locus_tag=AC00_0538 NZ_JJLU01000020.1 Protein Homology CDS 142226 142903 . + 0 ID=cds-WP_032280425.1;Parent=gene-AC00_RS21235;Dbxref=GenBank:WP_032280425.1;Name=WP_032280425.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308580.1;locus_tag=AC00_RS21235;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_032280425.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 142890 143669 . + . ID=gene-AC00_RS21230;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=AC00_RS21230;old_locus_tag=AC00_0539 NZ_JJLU01000020.1 Protein Homology CDS 142890 143669 . + 0 ID=cds-WP_032280426.1;Parent=gene-AC00_RS21230;Dbxref=GenBank:WP_032280426.1;Name=WP_032280426.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308581.2;locus_tag=AC00_RS21230;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_032280426.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 143732 144586 . - . ID=gene-AC00_RS21225;Name=cnoX;gbkey=Gene;gene=cnoX;gene_biotype=protein_coding;locus_tag=AC00_RS21225;old_locus_tag=AC00_0540 NZ_JJLU01000020.1 Protein Homology CDS 143732 144586 . - 0 ID=cds-WP_001295322.1;Parent=gene-AC00_RS21225;Dbxref=GenBank:WP_001295322.1;Name=WP_001295322.1;gbkey=CDS;gene=cnoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308582.2;locus_tag=AC00_RS21225;product=chaperedoxin;protein_id=WP_001295322.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 144647 145456 . - . ID=gene-AC00_RS21220;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=AC00_RS21220;old_locus_tag=AC00_0541 NZ_JJLU01000020.1 Protein Homology CDS 144647 145456 . - 0 ID=cds-WP_000148959.1;Parent=gene-AC00_RS21220;Dbxref=GenBank:WP_000148959.1;Name=WP_000148959.1;gbkey=CDS;gene=ybbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415026.1;locus_tag=AC00_RS21220;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000148959.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 145446 146069 . - . ID=gene-AC00_RS21215;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=AC00_RS21215;old_locus_tag=AC00_0542 NZ_JJLU01000020.1 Protein Homology CDS 145446 146069 . - 0 ID=cds-WP_001295836.1;Parent=gene-AC00_RS21215;Dbxref=GenBank:WP_001295836.1;Name=WP_001295836.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=AC00_RS21215;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_001295836.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 146040 146726 . + . ID=gene-AC00_RS21210;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=AC00_RS21210;old_locus_tag=AC00_0543 NZ_JJLU01000020.1 Protein Homology CDS 146040 146726 . + 0 ID=cds-WP_001110573.1;Parent=gene-AC00_RS21210;Dbxref=GenBank:WP_001110573.1;Name=WP_001110573.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=AC00_RS21210;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_001110573.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 146723 149137 . + . ID=gene-AC00_RS21205;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=AC00_RS21205;old_locus_tag=AC00_0544 NZ_JJLU01000020.1 Protein Homology CDS 146723 149137 . + 0 ID=cds-WP_032288163.1;Parent=gene-AC00_RS21205;Dbxref=GenBank:WP_032288163.1;Name=WP_032288163.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415029.1;locus_tag=AC00_RS21205;product=putative ABC transporter permease subunit YbbP;protein_id=WP_032288163.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 149455 149610 . - . ID=gene-AC00_RS31685;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AC00_RS31685;old_locus_tag=AC00_0546 NZ_JJLU01000020.1 Protein Homology CDS 149455 149610 . - 0 ID=cds-WP_001308457.1;Parent=gene-AC00_RS31685;Dbxref=GenBank:WP_001308457.1;Name=WP_001308457.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: protein motif:HMM:NF041472.1;locus_tag=AC00_RS31685;product=damage-inducible type I toxin DinQ;protein_id=WP_001308457.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 149950 151044 . - . ID=gene-AC00_RS21200;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=AC00_RS21200;old_locus_tag=AC00_0547 NZ_JJLU01000020.1 Protein Homology CDS 149950 151044 . - 0 ID=cds-WP_032280428.1;Parent=gene-AC00_RS21200;Dbxref=GenBank:WP_032280428.1;Name=WP_032280428.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308591.1;locus_tag=AC00_RS21200;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_032280428.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 151113 152048 . - . ID=gene-AC00_RS21195;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=AC00_RS21195;old_locus_tag=AC00_0548 NZ_JJLU01000020.1 Protein Homology CDS 151113 152048 . - 0 ID=cds-WP_032280429.1;Parent=gene-AC00_RS21195;Dbxref=GenBank:WP_032280429.1;Name=WP_032280429.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308592.1;locus_tag=AC00_RS21195;product=HTH-type transcriptional activator AllS;protein_id=WP_032280429.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 152278 152760 . + . ID=gene-AC00_RS21190;Name=allA;gbkey=Gene;gene=allA;gene_biotype=protein_coding;locus_tag=AC00_RS21190;old_locus_tag=AC00_0549 NZ_JJLU01000020.1 Protein Homology CDS 152278 152760 . + 0 ID=cds-WP_000776388.1;Parent=gene-AC00_RS21190;Dbxref=GenBank:WP_000776388.1;Name=WP_000776388.1;gbkey=CDS;gene=allA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308593.1;locus_tag=AC00_RS21190;product=ureidoglycolate lyase;protein_id=WP_000776388.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 152838 153653 . + . ID=gene-AC00_RS21185;Name=allR;gbkey=Gene;gene=allR;gene_biotype=protein_coding;locus_tag=AC00_RS21185;old_locus_tag=AC00_0550 NZ_JJLU01000020.1 Protein Homology CDS 152838 153653 . + 0 ID=cds-WP_000141275.1;Parent=gene-AC00_RS21185;Dbxref=GenBank:WP_000141275.1;Name=WP_000141275.1;gbkey=CDS;gene=allR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308594.1;locus_tag=AC00_RS21185;product=HTH-type transcriptional repressor AllR;protein_id=WP_000141275.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 153743 155524 . + . ID=gene-AC00_RS21180;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=AC00_RS21180;old_locus_tag=AC00_0551 NZ_JJLU01000020.1 Protein Homology CDS 153743 155524 . + 0 ID=cds-WP_001096881.1;Parent=gene-AC00_RS21180;Dbxref=GenBank:WP_001096881.1;Name=WP_001096881.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308595.1;locus_tag=AC00_RS21180;product=glyoxylate carboligase;protein_id=WP_001096881.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 155537 156313 . + . ID=gene-AC00_RS21175;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=AC00_RS21175;old_locus_tag=AC00_0552 NZ_JJLU01000020.1 Protein Homology CDS 155537 156313 . + 0 ID=cds-WP_032280430.1;Parent=gene-AC00_RS21175;Dbxref=GenBank:WP_032280430.1;Name=WP_032280430.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308596.1;locus_tag=AC00_RS21175;product=hydroxypyruvate isomerase;protein_id=WP_032280430.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 156413 157291 . + . ID=gene-AC00_RS21170;Name=glxR;gbkey=Gene;gene=glxR;gene_biotype=protein_coding;locus_tag=AC00_RS21170;old_locus_tag=AC00_0553 NZ_JJLU01000020.1 Protein Homology CDS 156413 157291 . + 0 ID=cds-WP_032280431.1;Parent=gene-AC00_RS21170;Dbxref=GenBank:WP_032280431.1;Name=WP_032280431.1;Ontology_term=GO:0046487,GO:0008679,GO:0051287;gbkey=CDS;gene=glxR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA,NAD binding|0051287||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415042.1;locus_tag=AC00_RS21170;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_032280431.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 157460 158914 . + . ID=gene-AC00_RS21165;Name=allW;gbkey=Gene;gene=allW;gene_biotype=protein_coding;locus_tag=AC00_RS21165;old_locus_tag=AC00_0554 NZ_JJLU01000020.1 Protein Homology CDS 157460 158914 . + 0 ID=cds-WP_000401139.1;Parent=gene-AC00_RS21165;Dbxref=GenBank:WP_000401139.1;Name=WP_000401139.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=allW;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415044.4;locus_tag=AC00_RS21165;product=allantoin transporter;protein_id=WP_000401139.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 158974 160335 . + . ID=gene-AC00_RS21160;Name=allB;gbkey=Gene;gene=allB;gene_biotype=protein_coding;locus_tag=AC00_RS21160;old_locus_tag=AC00_0555 NZ_JJLU01000020.1 Protein Homology CDS 158974 160335 . + 0 ID=cds-WP_032280432.1;Parent=gene-AC00_RS21160;Dbxref=GenBank:WP_032280432.1;Name=WP_032280432.1;Ontology_term=GO:0000256,GO:0004038;gbkey=CDS;gene=allB;go_function=allantoinase activity|0004038||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415045.1;locus_tag=AC00_RS21160;product=allantoinase AllB;protein_id=WP_032280432.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 160392 161693 . + . ID=gene-AC00_RS21155;Name=ybbY;gbkey=Gene;gene=ybbY;gene_biotype=protein_coding;locus_tag=AC00_RS21155;old_locus_tag=AC00_0556 NZ_JJLU01000020.1 Protein Homology CDS 160392 161693 . + 0 ID=cds-WP_032280433.1;Parent=gene-AC00_RS21155;Dbxref=GenBank:WP_032280433.1;Name=WP_032280433.1;gbkey=CDS;gene=ybbY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308602.2;locus_tag=AC00_RS21155;product=uracil/xanthine transporter;protein_id=WP_032280433.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 161715 162860 . + . ID=gene-AC00_RS21150;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=AC00_RS21150;old_locus_tag=AC00_0557 NZ_JJLU01000020.1 Protein Homology CDS 161715 162860 . + 0 ID=cds-WP_000706350.1;Parent=gene-AC00_RS21150;Dbxref=GenBank:WP_000706350.1;Name=WP_000706350.1;gbkey=CDS;gene=glxK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308603.1;locus_tag=AC00_RS21150;product=glycerate 3-kinase;protein_id=WP_000706350.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 163088 163873 . - . ID=gene-AC00_RS21145;Name=allE;gbkey=Gene;gene=allE;gene_biotype=protein_coding;locus_tag=AC00_RS21145;old_locus_tag=AC00_0558 NZ_JJLU01000020.1 Protein Homology CDS 163088 163873 . - 0 ID=cds-WP_000540946.1;Parent=gene-AC00_RS21145;Dbxref=GenBank:WP_000540946.1;Name=WP_000540946.1;Ontology_term=GO:0010136,GO:0071522;gbkey=CDS;gene=allE;go_function=ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308604.1;locus_tag=AC00_RS21145;product=(S)-ureidoglycine aminohydrolase;protein_id=WP_000540946.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 163884 165119 . - . ID=gene-AC00_RS21140;Name=allC;gbkey=Gene;gene=allC;gene_biotype=protein_coding;locus_tag=AC00_RS21140;old_locus_tag=AC00_0559 NZ_JJLU01000020.1 Protein Homology CDS 163884 165119 . - 0 ID=cds-WP_028132645.1;Parent=gene-AC00_RS21140;Dbxref=GenBank:WP_028132645.1;Name=WP_028132645.1;Ontology_term=GO:0000256,GO:0009442,GO:0047652;gbkey=CDS;gene=allC;go_function=allantoate deiminase activity|0047652||IEA;go_process=allantoin catabolic process|0000256||IEA,allantoin assimilation pathway|0009442||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308605.1;locus_tag=AC00_RS21140;product=allantoate deiminase;protein_id=WP_028132645.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 165141 166190 . - . ID=gene-AC00_RS21135;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=AC00_RS21135;old_locus_tag=AC00_0560 NZ_JJLU01000020.1 Protein Homology CDS 165141 166190 . - 0 ID=cds-WP_000703913.1;Parent=gene-AC00_RS21135;Dbxref=GenBank:WP_000703913.1;Name=WP_000703913.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308606.1;locus_tag=AC00_RS21135;product=ureidoglycolate dehydrogenase;protein_id=WP_000703913.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 166507 168174 . + . ID=gene-AC00_RS21130;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=AC00_RS21130;old_locus_tag=AC00_0561 NZ_JJLU01000020.1 Protein Homology CDS 166507 168174 . + 0 ID=cds-WP_032280434.1;Parent=gene-AC00_RS21130;Dbxref=GenBank:WP_032280434.1;Name=WP_032280434.1;gbkey=CDS;gene=fdrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308607.1;locus_tag=AC00_RS21130;product=acyl-CoA synthetase FdrA;protein_id=WP_032280434.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 168184 169443 . + . ID=gene-AC00_RS21125;Name=ylbE;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=AC00_RS21125;old_locus_tag=AC00_0562 NZ_JJLU01000020.1 Protein Homology CDS 168184 169443 . + 0 ID=cds-WP_032280435.1;Parent=gene-AC00_RS21125;Dbxref=GenBank:WP_032280435.1;Name=WP_032280435.1;gbkey=CDS;gene=ylbE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009029994.1;locus_tag=AC00_RS21125;product=DUF1116 domain-containing protein;protein_id=WP_032280435.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 169454 170269 . + . ID=gene-AC00_RS21120;Name=ylbF;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=AC00_RS21120;old_locus_tag=AC00_0563 NZ_JJLU01000020.1 Protein Homology CDS 169454 170269 . + 0 ID=cds-WP_032280436.1;Parent=gene-AC00_RS21120;Dbxref=GenBank:WP_032280436.1;Name=WP_032280436.1;gbkey=CDS;gene=ylbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308609.1;locus_tag=AC00_RS21120;product=DUF2877 domain-containing protein;protein_id=WP_032280436.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 170266 171159 . + . ID=gene-AC00_RS21115;Name=ybcF;gbkey=Gene;gene=ybcF;gene_biotype=protein_coding;locus_tag=AC00_RS21115;old_locus_tag=AC00_0564 NZ_JJLU01000020.1 Protein Homology CDS 170266 171159 . + 0 ID=cds-WP_000855378.1;Parent=gene-AC00_RS21115;Dbxref=GenBank:WP_000855378.1;Name=WP_000855378.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;gene=ybcF;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415054.1;locus_tag=AC00_RS21115;product=carbamate kinase;protein_id=WP_000855378.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 171296 172363 . - . ID=gene-AC00_RS21110;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=AC00_RS21110;old_locus_tag=AC00_0566 NZ_JJLU01000020.1 Protein Homology CDS 171296 172363 . - 0 ID=cds-WP_032280437.1;Parent=gene-AC00_RS21110;Dbxref=GenBank:WP_032280437.1;Name=WP_032280437.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706400.2;locus_tag=AC00_RS21110;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_032280437.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 172360 172869 . - . ID=gene-AC00_RS21105;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AC00_RS21105;old_locus_tag=AC00_0567 NZ_JJLU01000020.1 Protein Homology CDS 172360 172869 . - 0 ID=cds-WP_001295318.1;Parent=gene-AC00_RS21105;Dbxref=GenBank:WP_001295318.1;Name=WP_001295318.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=AC00_RS21105;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001295318.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 172987 173709 . - . ID=gene-AC00_RS21100;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=AC00_RS21100;old_locus_tag=AC00_0568 NZ_JJLU01000020.1 Protein Homology CDS 172987 173709 . - 0 ID=cds-WP_032280439.1;Parent=gene-AC00_RS21100;Dbxref=GenBank:WP_032280439.1;Name=WP_032280439.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415057.1;locus_tag=AC00_RS21100;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_032280439.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 173712 174206 . - . ID=gene-AC00_RS21095;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=AC00_RS21095;old_locus_tag=AC00_0569 NZ_JJLU01000020.1 Protein Homology CDS 173712 174206 . - 0 ID=cds-WP_000256002.1;Parent=gene-AC00_RS21095;Dbxref=GenBank:WP_000256002.1;Name=WP_000256002.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=AC00_RS21095;product=peptidylprolyl isomerase B;protein_id=WP_000256002.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 174380 175765 . + . ID=gene-AC00_RS21090;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AC00_RS21090;old_locus_tag=AC00_0570 NZ_JJLU01000020.1 Protein Homology CDS 174380 175765 . + 0 ID=cds-WP_000912345.1;Parent=gene-AC00_RS21090;Dbxref=GenBank:WP_000912345.1;Name=WP_000912345.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=AC00_RS21090;product=cysteine--tRNA ligase;protein_id=WP_000912345.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 175801 176322 . - . ID=gene-AC00_RS21085;Name=ybcI;gbkey=Gene;gene=ybcI;gene_biotype=protein_coding;locus_tag=AC00_RS21085;old_locus_tag=AC00_0571 NZ_JJLU01000020.1 Protein Homology CDS 175801 176322 . - 0 ID=cds-WP_001143547.1;Parent=gene-AC00_RS21085;Dbxref=GenBank:WP_001143547.1;Name=WP_001143547.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;gene=ybcI;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308616.1;locus_tag=AC00_RS21085;product=metal-dependent hydrolase;protein_id=WP_001143547.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 176430 176642 . - . ID=gene-AC00_RS21080;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=AC00_RS21080;old_locus_tag=AC00_0572 NZ_JJLU01000020.1 Protein Homology CDS 176430 176642 . - 0 ID=cds-WP_000190288.1;Parent=gene-AC00_RS21080;Dbxref=GenBank:WP_000190288.1;Name=WP_000190288.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308617.2;locus_tag=AC00_RS21080;product=ribosome-associated protein YbcJ;protein_id=WP_000190288.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 176644 177510 . - . ID=gene-AC00_RS21075;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AC00_RS21075;old_locus_tag=AC00_0573 NZ_JJLU01000020.1 Protein Homology CDS 176644 177510 . - 0 ID=cds-WP_000729155.1;Parent=gene-AC00_RS21075;Dbxref=GenBank:WP_000729155.1;Name=WP_000729155.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308618.1;locus_tag=AC00_RS21075;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_000729155.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 177981 178523 . + . ID=gene-AC00_RS21070;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AC00_RS21070;old_locus_tag=AC00_0574 NZ_JJLU01000020.1 Protein Homology CDS 177981 178523 . + 0 ID=cds-WP_032280440.1;Parent=gene-AC00_RS21070;Dbxref=GenBank:WP_032280440.1;Name=WP_032280440.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308619.2;locus_tag=AC00_RS21070;product=type 1 fimbrial major subunit FimA;protein_id=WP_032280440.1;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 178743 179435 . + . ID=gene-AC00_RS21065;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AC00_RS21065;old_locus_tag=AC00_0575 NZ_JJLU01000020.1 Protein Homology CDS 178743 179435 . + 0 ID=cds-WP_000988364.1;Parent=gene-AC00_RS21065;Dbxref=GenBank:WP_000988364.1;Name=WP_000988364.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415064.1;locus_tag=AC00_RS21065;product=type 1 fimbria chaperone FimC;protein_id=WP_000988364.1;transl_table=11 NZ_JJLU01000020.1 RefSeq pseudogene 179466 181706 . + . ID=gene-AC00_RS21060;Name=fimD;end_range=181706,.;gbkey=Gene;gene=fimD;gene_biotype=pseudogene;locus_tag=AC00_RS21060;old_locus_tag=AC00_0576;partial=true;pseudo=true NZ_JJLU01000020.1 Protein Homology CDS 179466 181706 . + 0 ID=cds-AC00_RS21060;Parent=gene-AC00_RS21060;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=181706,.;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308621.1;locus_tag=AC00_RS21060;partial=true;product=outer membrane usher protein FimD;pseudo=true;transl_table=11 NZ_JJLU01000020.1 RefSeq gene 181723 181979 . - . ID=gene-AC00_RS21055;Name=AC00_RS21055;end_range=181979,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21055;old_locus_tag=AC00_0577;partial=true NZ_JJLU01000020.1 Protein Homology CDS 181723 181979 . - 2 ID=cds-WP_000474469.1-2;Parent=gene-AC00_RS21055;Dbxref=GenBank:WP_000474469.1;Name=WP_000474469.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=181979,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS21055;partial=true;product=IS1 family transposase;protein_id=WP_000474469.1;transl_table=11 ##sequence-region NZ_JJLU01000021.1 1 1876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000021.1 RefSeq region 1 1876 . + . ID=NZ_JJLU01000021.1:1..1876;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000021.1 RefSeq gene 1 216 . - . ID=gene-AC00_RS0123840;Name=AC00_RS0123840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123840;old_locus_tag=AC00_0578;partial=true;start_range=.,1 NZ_JJLU01000021.1 Protein Homology CDS 1 216 . - 0 ID=cds-WP_001395569.1;Parent=gene-AC00_RS0123840;Dbxref=GenBank:WP_001395569.1;Name=WP_001395569.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123840;partial=true;product=IS1 family transposase;protein_id=WP_001395569.1;start_range=.,1;transl_table=11 NZ_JJLU01000021.1 RefSeq pseudogene 273 854 . + . ID=gene-AC00_RS21050;Name=AC00_RS21050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS21050;old_locus_tag=AC00_0579;partial=true;pseudo=true;start_range=.,273 NZ_JJLU01000021.1 Protein Homology CDS 273 854 . + 0 ID=cds-AC00_RS21050;Parent=gene-AC00_RS21050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308622.2;locus_tag=AC00_RS21050;partial=true;product=fimbrial protein;pseudo=true;start_range=.,273;transl_table=11 NZ_JJLU01000021.1 RefSeq gene 865 1380 . + . ID=gene-AC00_RS21045;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=AC00_RS21045;old_locus_tag=AC00_0580 NZ_JJLU01000021.1 Protein Homology CDS 865 1380 . + 0 ID=cds-WP_032280444.1;Parent=gene-AC00_RS21045;Dbxref=GenBank:WP_032280444.1;Name=WP_032280444.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308623.1;locus_tag=AC00_RS21045;product=fimbria assembly protein;protein_id=WP_032280444.1;transl_table=11 NZ_JJLU01000021.1 RefSeq pseudogene 1383 1628 . - . ID=gene-AC00_RS0123845;Name=AC00_RS0123845;end_range=1628,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0123845;old_locus_tag=AC00_0581;partial=true;pseudo=true NZ_JJLU01000021.1 Protein Homology CDS 1383 1628 . - 0 ID=cds-AC00_RS0123845;Parent=gene-AC00_RS0123845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355;end_range=1628,.;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AC00_RS0123845;partial=true;product=LuxR C-terminal-related transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLU01000021.1 RefSeq gene 1686 1876 . + . ID=gene-AC00_RS27125;Name=AC00_RS27125;end_range=1876,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27125;old_locus_tag=AC00_0582;partial=true NZ_JJLU01000021.1 Protein Homology CDS 1686 1876 . + 0 ID=cds-WP_001396889.1;Parent=gene-AC00_RS27125;Dbxref=GenBank:WP_001396889.1;Name=WP_001396889.1;Ontology_term=GO:0006313;end_range=1876,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27125;partial=true;product=IS1 family transposase;protein_id=WP_001396889.1;transl_table=11 ##sequence-region NZ_JJLU01000022.1 1 10911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000022.1 RefSeq region 1 10911 . + . ID=NZ_JJLU01000022.1:1..10911;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000022.1 RefSeq gene 1 254 . + . ID=gene-AC00_RS21040;Name=AC00_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21040;old_locus_tag=AC00_0583;partial=true;start_range=.,1 NZ_JJLU01000022.1 Protein Homology CDS 1 254 . + 2 ID=cds-WP_000306783.1;Parent=gene-AC00_RS21040;Dbxref=GenBank:WP_000306783.1;Name=WP_000306783.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS21040;partial=true;product=IS1 family transposase;protein_id=WP_000306783.1;start_range=.,1;transl_table=11 NZ_JJLU01000022.1 RefSeq pseudogene 271 663 . - . ID=gene-AC00_RS21035;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=pseudogene;locus_tag=AC00_RS21035;old_locus_tag=AC00_0584;partial=true;pseudo=true;start_range=.,271 NZ_JJLU01000022.1 Protein Homology CDS 271 663 . - 0 ID=cds-AC00_RS21035;Parent=gene-AC00_RS21035;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308624.1;locus_tag=AC00_RS21035;partial=true;product=fimbria biosynthesis transcriptional regulator FimZ;pseudo=true;start_range=.,271;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 906 982 . + . ID=gene-AC00_RS21030;Name=AC00_RS21030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS21030;old_locus_tag=AC00_0586 NZ_JJLU01000022.1 tRNAscan-SE tRNA 906 982 . + . ID=rna-AC00_RS21030;Parent=gene-AC00_RS21030;anticodon=(pos:940..942);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS21030;product=tRNA-Arg NZ_JJLU01000022.1 tRNAscan-SE exon 906 982 . + . ID=exon-AC00_RS21030-1;Parent=rna-AC00_RS21030;anticodon=(pos:940..942);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS21030;product=tRNA-Arg NZ_JJLU01000022.1 RefSeq gene 998 2161 . - . ID=gene-AC00_RS21025;Name=intD;gbkey=Gene;gene=intD;gene_biotype=protein_coding;locus_tag=AC00_RS21025;old_locus_tag=AC00_0587 NZ_JJLU01000022.1 Protein Homology CDS 998 2161 . - 0 ID=cds-WP_001299447.1;Parent=gene-AC00_RS21025;Dbxref=GenBank:WP_001299447.1;Name=WP_001299447.1;gbkey=CDS;gene=intD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415069.1;locus_tag=AC00_RS21025;product=integrase;protein_id=WP_001299447.1;transl_table=11 NZ_JJLU01000022.1 RefSeq pseudogene 2323 2388 . - . ID=gene-AC00_RS31110;Name=AC00_RS31110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31110;partial=true;pseudo=true;start_range=.,2323 NZ_JJLU01000022.1 Protein Homology CDS 2323 2388 . - 0 ID=cds-AC00_RS31110;Parent=gene-AC00_RS31110;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.6;locus_tag=AC00_RS31110;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,2323;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 2360 2638 . - . ID=gene-AC00_RS0123850;Name=AC00_RS0123850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123850 NZ_JJLU01000022.1 Protein Homology CDS 2360 2638 . - 0 ID=cds-WP_000488407.1;Parent=gene-AC00_RS0123850;Dbxref=GenBank:WP_000488407.1;Name=WP_000488407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248605.1;locus_tag=AC00_RS0123850;product=DUF4222 domain-containing protein;protein_id=WP_000488407.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 2686 2904 . - . ID=gene-AC00_RS21020;Name=AC00_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS21020;old_locus_tag=AC00_0588 NZ_JJLU01000022.1 Protein Homology CDS 2686 2904 . - 0 ID=cds-WP_000763385.1;Parent=gene-AC00_RS21020;Dbxref=GenBank:WP_000763385.1;Name=WP_000763385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246897.1;locus_tag=AC00_RS21020;product=TraR/DksA family transcriptional regulator;protein_id=WP_000763385.1;transl_table=11 NZ_JJLU01000022.1 RefSeq pseudogene 3003 3104 . - . ID=gene-AC00_RS31060;Name=AC00_RS31060;end_range=3104,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31060;partial=true;pseudo=true NZ_JJLU01000022.1 Protein Homology CDS 3003 3104 . - 0 ID=cds-AC00_RS31060;Parent=gene-AC00_RS31060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3104,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239470.1;locus_tag=AC00_RS31060;partial=true;product=cell division protein ZapA;pseudo=true;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 3132 3494 . + . ID=gene-AC00_RS21015;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=AC00_RS21015;old_locus_tag=AC00_0589 NZ_JJLU01000022.1 Protein Homology CDS 3132 3494 . + 0 ID=cds-WP_001099712.1;Parent=gene-AC00_RS21015;Dbxref=GenBank:WP_001099712.1;Name=WP_001099712.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415082.1;locus_tag=AC00_RS21015;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_001099712.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 3491 3631 . + . ID=gene-AC00_RS21010;Name=ylcG;gbkey=Gene;gene=ylcG;gene_biotype=protein_coding;locus_tag=AC00_RS21010;old_locus_tag=AC00_0590 NZ_JJLU01000022.1 Protein Homology CDS 3491 3631 . + 0 ID=cds-WP_032280446.1;Parent=gene-AC00_RS21010;Dbxref=GenBank:WP_032280446.1;Name=WP_032280446.1;gbkey=CDS;gene=ylcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588439.1;locus_tag=AC00_RS21010;product=YlcG family protein;protein_id=WP_032280446.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 3717 4100 . + . ID=gene-AC00_RS21005;Name=quuD;gbkey=Gene;gene=quuD;gene_biotype=protein_coding;locus_tag=AC00_RS21005;old_locus_tag=AC00_0591 NZ_JJLU01000022.1 Protein Homology CDS 3717 4100 . + 0 ID=cds-WP_001204774.1;Parent=gene-AC00_RS21005;Dbxref=GenBank:WP_001204774.1;Name=WP_001204774.1;gbkey=CDS;gene=quuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415083.1;locus_tag=AC00_RS21005;product=antitermination protein QuuD;protein_id=WP_001204774.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 4289 5371 . - . ID=gene-AC00_RS21000;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AC00_RS21000;old_locus_tag=AC00_0592 NZ_JJLU01000022.1 Protein Homology CDS 4289 5371 . - 0 ID=cds-WP_000737263.1;Parent=gene-AC00_RS21000;Dbxref=GenBank:WP_000737263.1;Name=WP_000737263.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707819.1;locus_tag=AC00_RS21000;product=porin OmpC;protein_id=WP_000737263.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 5945 6160 . + . ID=gene-AC00_RS20995;Name=essD;gbkey=Gene;gene=essD;gene_biotype=protein_coding;locus_tag=AC00_RS20995;old_locus_tag=AC00_0593 NZ_JJLU01000022.1 Protein Homology CDS 5945 6160 . + 0 ID=cds-WP_000839596.1;Parent=gene-AC00_RS20995;Dbxref=GenBank:WP_000839596.1;Name=WP_000839596.1;gbkey=CDS;gene=essD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415086.1;locus_tag=AC00_RS20995;product=phage lysis protein EssD;protein_id=WP_000839596.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 6160 6657 . + . ID=gene-AC00_RS20990;Name=rrrD;gbkey=Gene;gene=rrrD;gene_biotype=protein_coding;locus_tag=AC00_RS20990;old_locus_tag=AC00_0594 NZ_JJLU01000022.1 Protein Homology CDS 6160 6657 . + 0 ID=cds-WP_001135256.1;Parent=gene-AC00_RS20990;Dbxref=GenBank:WP_001135256.1;Name=WP_001135256.1;gbkey=CDS;gene=rrrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415087.1;locus_tag=AC00_RS20990;product=lysozyme;protein_id=WP_001135256.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 6654 7112 . + . ID=gene-AC00_RS20985;Name=AC00_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20985;old_locus_tag=AC00_0595 NZ_JJLU01000022.1 Protein Homology CDS 6654 7112 . + 0 ID=cds-WP_001408742.1;Parent=gene-AC00_RS20985;Dbxref=GenBank:WP_001408742.1;Name=WP_001408742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009453323.1;locus_tag=AC00_RS20985;product=lysis protein;protein_id=WP_001408742.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 7408 7806 . + . ID=gene-AC00_RS27135;Name=AC00_RS27135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27135 NZ_JJLU01000022.1 Protein Homology CDS 7408 7806 . + 0 ID=cds-WP_000417740.1;Parent=gene-AC00_RS27135;Dbxref=GenBank:WP_000417740.1;Name=WP_000417740.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:NF022019.6;locus_tag=AC00_RS27135;product=GIY-YIG nuclease family protein;protein_id=WP_000417740.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 8485 8895 . - . ID=gene-AC00_RS0123860;Name=AC00_RS0123860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123860 NZ_JJLU01000022.1 Protein Homology CDS 8485 8895 . - 0 ID=cds-WP_032280447.1;Parent=gene-AC00_RS0123860;Dbxref=GenBank:WP_032280447.1;Name=WP_032280447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619138.1;locus_tag=AC00_RS0123860;product=DUF1398 domain-containing protein;protein_id=WP_032280447.1;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 8953 9186 . - . ID=gene-AC00_RS0123865;Name=AC00_RS0123865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123865;old_locus_tag=AC00_0597 NZ_JJLU01000022.1 Protein Homology CDS 8953 9186 . - 0 ID=cds-WP_001309326.1;Parent=gene-AC00_RS0123865;Dbxref=GenBank:WP_001309326.1;Name=WP_001309326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588454.1;locus_tag=AC00_RS0123865;product=YlcI/YnfO family protein;protein_id=WP_001309326.1;transl_table=11 NZ_JJLU01000022.1 RefSeq pseudogene 9575 10069 . + . ID=gene-AC00_RS31115;Name=AC00_RS31115;end_range=10069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31115;partial=true;pseudo=true NZ_JJLU01000022.1 Protein Homology CDS 9575 10069 . + 0 ID=cds-AC00_RS31115;Parent=gene-AC00_RS31115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10069,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518788.1;locus_tag=AC00_RS31115;partial=true;product=terminase small subunit;pseudo=true;transl_table=11 NZ_JJLU01000022.1 RefSeq gene 10109 10399 . + . ID=gene-AC00_RS31120;Name=AC00_RS31120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31120 NZ_JJLU01000022.1 Protein Homology CDS 10109 10399 . + 0 ID=cds-WP_375156540.1;Parent=gene-AC00_RS31120;Dbxref=GenBank:WP_375156540.1;Name=WP_375156540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.6;locus_tag=AC00_RS31120;product=Ig-like domain-containing protein;protein_id=WP_375156540.1;transl_table=11 NZ_JJLU01000022.1 RefSeq pseudogene 10415 10660 . + . ID=gene-AC00_RS0123890;Name=gpG;end_range=10660,.;gbkey=Gene;gene=gpG;gene_biotype=pseudogene;locus_tag=AC00_RS0123890;old_locus_tag=AC00_0600;partial=true;pseudo=true NZ_JJLU01000022.1 Protein Homology CDS 10415 10660 . + 0 ID=cds-AC00_RS0123890;Parent=gene-AC00_RS0123890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10660,.;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310755.1;locus_tag=AC00_RS0123890;partial=true;product=phage tail assembly chaperone G;pseudo=true;transl_table=11 NZ_JJLU01000022.1 RefSeq pseudogene 10651 10776 . + . ID=gene-AC00_RS31125;Name=AC00_RS31125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31125;partial=true;pseudo=true;start_range=.,10651 NZ_JJLU01000022.1 Protein Homology CDS 10651 10776 . + 0 ID=cds-AC00_RS31125;Parent=gene-AC00_RS31125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415890.2;locus_tag=AC00_RS31125;partial=true;product=phage tail protein;pseudo=true;start_range=.,10651;transl_table=11 NZ_JJLU01000022.1 RefSeq pseudogene 10776 10911 . + . ID=gene-AC00_RS30845;Name=AC00_RS30845;end_range=10911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30845;old_locus_tag=AC00_0601;partial=true;pseudo=true NZ_JJLU01000022.1 Protein Homology CDS 10776 10911 . + 0 ID=cds-AC00_RS30845;Parent=gene-AC00_RS30845;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AC00_RS30845;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000023.1 1 15420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000023.1 RefSeq region 1 15420 . + . ID=NZ_JJLU01000023.1:1..15420;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000023.1 RefSeq gene 1 226 . - . ID=gene-AC00_RS0123895;Name=AC00_RS0123895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123895;old_locus_tag=AC00_0602;partial=true;start_range=.,1 NZ_JJLU01000023.1 Protein Homology CDS 1 226 . - 0 ID=cds-WP_001482752.1;Parent=gene-AC00_RS0123895;Dbxref=GenBank:WP_001482752.1;Name=WP_001482752.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123895;partial=true;product=IS1 family transposase;protein_id=WP_001482752.1;start_range=.,1;transl_table=11 NZ_JJLU01000023.1 RefSeq pseudogene 282 398 . - . ID=gene-AC00_RS30850;Name=AC00_RS30850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30850;old_locus_tag=AC00_0603;partial=true;pseudo=true;start_range=.,282 NZ_JJLU01000023.1 Protein Homology CDS 282 398 . - 0 ID=cds-AC00_RS30850;Parent=gene-AC00_RS30850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308628.1;locus_tag=AC00_RS30850;partial=true;product=hypothetical protein;pseudo=true;start_range=.,282;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 548 1990 . - . ID=gene-AC00_RS20975;Name=cusS;gbkey=Gene;gene=cusS;gene_biotype=protein_coding;locus_tag=AC00_RS20975;old_locus_tag=AC00_0604 NZ_JJLU01000023.1 Protein Homology CDS 548 1990 . - 0 ID=cds-WP_032288165.1;Parent=gene-AC00_RS20975;Dbxref=GenBank:WP_032288165.1;Name=WP_032288165.1;gbkey=CDS;gene=cusS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415102.1;locus_tag=AC00_RS20975;product=Cu(+)/Ag(+) sensor histidine kinase CusS;protein_id=WP_032288165.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 1980 2663 . - . ID=gene-AC00_RS20970;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=AC00_RS20970;old_locus_tag=AC00_0605 NZ_JJLU01000023.1 Protein Homology CDS 1980 2663 . - 0 ID=cds-WP_000770953.1;Parent=gene-AC00_RS20970;Dbxref=GenBank:WP_000770953.1;Name=WP_000770953.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308636.1;locus_tag=AC00_RS20970;product=copper response regulator transcription factor CusR;protein_id=WP_000770953.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 2820 4202 . + . ID=gene-AC00_RS20965;Name=cusC;gbkey=Gene;gene=cusC;gene_biotype=protein_coding;locus_tag=AC00_RS20965;old_locus_tag=AC00_0607 NZ_JJLU01000023.1 Protein Homology CDS 2820 4202 . + 0 ID=cds-WP_032288166.1;Parent=gene-AC00_RS20965;Dbxref=GenBank:WP_032288166.1;Name=WP_032288166.1;gbkey=CDS;gene=cusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308637.1;locus_tag=AC00_RS20965;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC;protein_id=WP_032288166.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 4226 4558 . + . ID=gene-AC00_RS20960;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=AC00_RS20960;old_locus_tag=AC00_0608 NZ_JJLU01000023.1 Protein Homology CDS 4226 4558 . + 0 ID=cds-WP_032280454.1;Parent=gene-AC00_RS20960;Dbxref=GenBank:WP_032280454.1;Name=WP_032280454.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706420.1;locus_tag=AC00_RS20960;product=Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone CusF;protein_id=WP_032280454.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 4574 5797 . + . ID=gene-AC00_RS20955;Name=cusB;gbkey=Gene;gene=cusB;gene_biotype=protein_coding;locus_tag=AC00_RS20955;old_locus_tag=AC00_0609 NZ_JJLU01000023.1 Protein Homology CDS 4574 5797 . + 0 ID=cds-WP_032280455.1;Parent=gene-AC00_RS20955;Dbxref=GenBank:WP_032280455.1;Name=WP_032280455.1;gbkey=CDS;gene=cusB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308639.1;locus_tag=AC00_RS20955;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit CusB;protein_id=WP_032280455.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 5809 8952 . + . ID=gene-AC00_RS20950;Name=cusA;gbkey=Gene;gene=cusA;gene_biotype=protein_coding;locus_tag=AC00_RS20950;old_locus_tag=AC00_0610 NZ_JJLU01000023.1 Protein Homology CDS 5809 8952 . + 0 ID=cds-WP_032288167.1;Parent=gene-AC00_RS20950;Dbxref=GenBank:WP_032288167.1;Name=WP_032288167.1;gbkey=CDS;gene=cusA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415107.1;locus_tag=AC00_RS20950;product=Cu(+)/Ag(+) efflux RND transporter permease subunit CusA;protein_id=WP_032288167.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 9054 10430 . + . ID=gene-AC00_RS20945;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=AC00_RS20945;old_locus_tag=AC00_0611 NZ_JJLU01000023.1 Protein Homology CDS 9054 10430 . + 0 ID=cds-WP_032280457.1;Parent=gene-AC00_RS20945;Dbxref=GenBank:WP_032280457.1;Name=WP_032280457.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415108.1;locus_tag=AC00_RS20945;product=phenylalanine transporter;protein_id=WP_032280457.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 10498 11745 . - . ID=gene-AC00_RS20940;Name=ybdG;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=AC00_RS20940;old_locus_tag=AC00_0612 NZ_JJLU01000023.1 Protein Homology CDS 10498 11745 . - 0 ID=cds-WP_001153148.1;Parent=gene-AC00_RS20940;Dbxref=GenBank:WP_001153148.1;Name=WP_001153148.1;gbkey=CDS;gene=ybdG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415109.1;locus_tag=AC00_RS20940;product=mechanosensitive ion channel YbdG;protein_id=WP_001153148.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 11853 12506 . - . ID=gene-AC00_RS20935;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=AC00_RS20935;old_locus_tag=AC00_0613 NZ_JJLU01000023.1 Protein Homology CDS 11853 12506 . - 0 ID=cds-WP_000351480.1;Parent=gene-AC00_RS20935;Dbxref=GenBank:WP_000351480.1;Name=WP_000351480.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308643.1;locus_tag=AC00_RS20935;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_000351480.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 12600 12968 . - . ID=gene-AC00_RS20930;Name=ybdF;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;locus_tag=AC00_RS20930;old_locus_tag=AC00_0614 NZ_JJLU01000023.1 Protein Homology CDS 12600 12968 . - 0 ID=cds-WP_032280458.1;Parent=gene-AC00_RS20930;Dbxref=GenBank:WP_032280458.1;Name=WP_032280458.1;gbkey=CDS;gene=ybdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308644.1;locus_tag=AC00_RS20930;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_032280458.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 13032 13280 . - . ID=gene-AC00_RS20925;Name=ybdJ;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=AC00_RS20925;old_locus_tag=AC00_0615 NZ_JJLU01000023.1 Protein Homology CDS 13032 13280 . - 0 ID=cds-WP_032280459.1;Parent=gene-AC00_RS20925;Dbxref=GenBank:WP_032280459.1;Name=WP_032280459.1;gbkey=CDS;gene=ybdJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308645.1;locus_tag=AC00_RS20925;product=DUF1158 domain-containing protein;protein_id=WP_032280459.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 13346 14464 . - . ID=gene-AC00_RS20920;Name=ybdK;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;locus_tag=AC00_RS20920;old_locus_tag=AC00_0616 NZ_JJLU01000023.1 Protein Homology CDS 13346 14464 . - 0 ID=cds-WP_032280460.1;Parent=gene-AC00_RS20920;Dbxref=GenBank:WP_032280460.1;Name=WP_032280460.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;gene=ybdK;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415113.1;locus_tag=AC00_RS20920;product=YbdK family carboxylate-amine ligase;protein_id=WP_032280460.1;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 14523 14651 . + . ID=gene-AC00_RS31525;Name=AC00_RS31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31525;old_locus_tag=AC00_0617 NZ_JJLU01000023.1 Protein Homology CDS 14523 14651 . + 0 ID=cds-WP_032280461.1;Parent=gene-AC00_RS31525;Dbxref=GenBank:WP_032280461.1;Name=WP_032280461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001225231.1;locus_tag=AC00_RS31525;product=hypothetical protein;protein_id=WP_032280461.1;transl_table=11 NZ_JJLU01000023.1 RefSeq pseudogene 14678 14945 . - . ID=gene-AC00_RS31615;Name=AC00_RS31615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31615;pseudo=true NZ_JJLU01000023.1 Protein Homology CDS 14678 14945 . - 0 ID=cds-AC00_RS31615;Parent=gene-AC00_RS31615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009008364.1;locus_tag=AC00_RS31615;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000023.1 RefSeq gene 14914 15066 . + . ID=gene-AC00_RS20910;Name=hokE;gbkey=Gene;gene=hokE;gene_biotype=protein_coding;locus_tag=AC00_RS20910;old_locus_tag=AC00_0618 NZ_JJLU01000023.1 Protein Homology CDS 14914 15066 . + 0 ID=cds-WP_000956467.1;Parent=gene-AC00_RS20910;Dbxref=GenBank:WP_000956467.1;Name=WP_000956467.1;gbkey=CDS;gene=hokE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308647.1;locus_tag=AC00_RS20910;product=type I toxin-antitoxin system toxin HokE;protein_id=WP_000956467.1;transl_table=11 NZ_JJLU01000023.1 RefSeq pseudogene 15259 15420 . - . ID=gene-AC00_RS30855;Name=AC00_RS30855;end_range=15420,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30855;old_locus_tag=AC00_0619;partial=true;pseudo=true NZ_JJLU01000023.1 Protein Homology CDS 15259 15420 . - 0 ID=cds-AC00_RS30855;Parent=gene-AC00_RS30855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15420,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS30855;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000024.1 1 82851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000024.1 RefSeq region 1 82851 . + . ID=NZ_JJLU01000024.1:1..82851;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000024.1 RefSeq gene 1 951 . + . ID=gene-AC00_RS20900;Name=AC00_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20900;old_locus_tag=AC00_0620;partial=true;start_range=.,1 NZ_JJLU01000024.1 Protein Homology CDS 1 951 . + 0 ID=cds-WP_012738266.1-2;Parent=gene-AC00_RS20900;Dbxref=GenBank:WP_012738266.1;Name=WP_012738266.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS20900;partial=true;product=IS4 family transposase;protein_id=WP_012738266.1;start_range=.,1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 1233 1853 . - . ID=gene-AC00_RS20895;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=AC00_RS20895;old_locus_tag=AC00_0621 NZ_JJLU01000024.1 Protein Homology CDS 1233 1853 . - 0 ID=cds-WP_077757356.1;Parent=gene-AC00_RS20895;Dbxref=GenBank:WP_077757356.1;Name=WP_077757356.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415115.2;locus_tag=AC00_RS20895;product=enterobactin synthase subunit EntD;protein_id=WP_077757356.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 2028 4268 . - . ID=gene-AC00_RS20890;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=AC00_RS20890;old_locus_tag=AC00_0622 NZ_JJLU01000024.1 Protein Homology CDS 2028 4268 . - 0 ID=cds-WP_032280463.1;Parent=gene-AC00_RS20890;Dbxref=GenBank:WP_032280463.1;Name=WP_032280463.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308650.1;locus_tag=AC00_RS20890;product=siderophore enterobactin receptor FepA;protein_id=WP_032280463.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 4511 5713 . + . ID=gene-AC00_RS20885;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=AC00_RS20885;old_locus_tag=AC00_0624 NZ_JJLU01000024.1 Protein Homology CDS 4511 5713 . + 0 ID=cds-WP_032280464.1;Parent=gene-AC00_RS20885;Dbxref=GenBank:WP_032280464.1;Name=WP_032280464.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706440.1;locus_tag=AC00_RS20885;product=enterochelin esterase;protein_id=WP_032280464.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 5716 5934 . + . ID=gene-AC00_RS20880;Name=ybdZ;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=AC00_RS20880;old_locus_tag=AC00_0625 NZ_JJLU01000024.1 Protein Homology CDS 5716 5934 . + 0 ID=cds-WP_032280465.1;Parent=gene-AC00_RS20880;Dbxref=GenBank:WP_032280465.1;Name=WP_032280465.1;gbkey=CDS;gene=ybdZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502592.1;locus_tag=AC00_RS20880;product=enterobactin biosynthesis protein YbdZ;protein_id=WP_032280465.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 5931 9812 . + . ID=gene-AC00_RS20875;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=AC00_RS20875;old_locus_tag=AC00_0626 NZ_JJLU01000024.1 Protein Homology CDS 5931 9812 . + 0 ID=cds-WP_032280466.1;Parent=gene-AC00_RS20875;Dbxref=GenBank:WP_032280466.1;Name=WP_032280466.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308652.1;locus_tag=AC00_RS20875;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_032280466.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 10028 11161 . + . ID=gene-AC00_RS20870;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=AC00_RS20870;old_locus_tag=AC00_0627 NZ_JJLU01000024.1 Protein Homology CDS 10028 11161 . + 0 ID=cds-WP_032280467.1;Parent=gene-AC00_RS20870;Dbxref=GenBank:WP_032280467.1;Name=WP_032280467.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308653.1;locus_tag=AC00_RS20870;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_032280467.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 11158 11973 . - . ID=gene-AC00_RS20865;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=AC00_RS20865;old_locus_tag=AC00_0628 NZ_JJLU01000024.1 Protein Homology CDS 11158 11973 . - 0 ID=cds-WP_032280468.1;Parent=gene-AC00_RS20865;Dbxref=GenBank:WP_032280468.1;Name=WP_032280468.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415120.1;locus_tag=AC00_RS20865;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_032280468.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 11970 12962 . - . ID=gene-AC00_RS20860;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=AC00_RS20860;old_locus_tag=AC00_0629 NZ_JJLU01000024.1 Protein Homology CDS 11970 12962 . - 0 ID=cds-WP_021556580.1;Parent=gene-AC00_RS20860;Dbxref=GenBank:WP_021556580.1;Name=WP_021556580.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308655.1;locus_tag=AC00_RS20860;product=iron-enterobactin ABC transporter permease;protein_id=WP_021556580.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 12959 13963 . - . ID=gene-AC00_RS20855;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=AC00_RS20855;old_locus_tag=AC00_0630 NZ_JJLU01000024.1 Protein Homology CDS 12959 13963 . - 0 ID=cds-WP_001298899.1;Parent=gene-AC00_RS20855;Dbxref=GenBank:WP_001298899.1;Name=WP_001298899.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308656.1;locus_tag=AC00_RS20855;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_001298899.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 14074 15324 . + . ID=gene-AC00_RS20850;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=AC00_RS20850;old_locus_tag=AC00_0631 NZ_JJLU01000024.1 Protein Homology CDS 14074 15324 . + 0 ID=cds-WP_032280469.1;Parent=gene-AC00_RS20850;Dbxref=GenBank:WP_032280469.1;Name=WP_032280469.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308657.1;locus_tag=AC00_RS20850;product=enterobactin transporter EntS;protein_id=WP_032280469.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 15328 16284 . - . ID=gene-AC00_RS20845;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=AC00_RS20845;old_locus_tag=AC00_0632 NZ_JJLU01000024.1 Protein Homology CDS 15328 16284 . - 0 ID=cds-WP_032280470.1;Parent=gene-AC00_RS20845;Dbxref=GenBank:WP_032280470.1;Name=WP_032280470.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308658.1;locus_tag=AC00_RS20845;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_032280470.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 16473 17648 . + . ID=gene-AC00_RS20840;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=AC00_RS20840;old_locus_tag=AC00_0633 NZ_JJLU01000024.1 Protein Homology CDS 16473 17648 . + 0 ID=cds-WP_001307665.1;Parent=gene-AC00_RS20840;Dbxref=GenBank:WP_001307665.1;Name=WP_001307665.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=AC00_RS20840;product=isochorismate synthase EntC;protein_id=WP_001307665.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 17658 19268 . + . ID=gene-AC00_RS20835;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=AC00_RS20835;old_locus_tag=AC00_0634 NZ_JJLU01000024.1 Protein Homology CDS 17658 19268 . + 0 ID=cds-WP_032280471.1;Parent=gene-AC00_RS20835;Dbxref=GenBank:WP_032280471.1;Name=WP_032280471.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308660.1;locus_tag=AC00_RS20835;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_032280471.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 19282 20139 . + . ID=gene-AC00_RS20830;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=AC00_RS20830;old_locus_tag=AC00_0635 NZ_JJLU01000024.1 Protein Homology CDS 19282 20139 . + 0 ID=cds-WP_032280472.1;Parent=gene-AC00_RS20830;Dbxref=GenBank:WP_032280472.1;Name=WP_032280472.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=AC00_RS20830;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_032280472.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 20139 20885 . + . ID=gene-AC00_RS20825;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=AC00_RS20825;old_locus_tag=AC00_0636 NZ_JJLU01000024.1 Protein Homology CDS 20139 20885 . + 0 ID=cds-WP_032280473.1;Parent=gene-AC00_RS20825;Dbxref=GenBank:WP_032280473.1;Name=WP_032280473.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415128.1;locus_tag=AC00_RS20825;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_032280473.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 20888 21301 . + . ID=gene-AC00_RS20820;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=AC00_RS20820;old_locus_tag=AC00_0637 NZ_JJLU01000024.1 Protein Homology CDS 20888 21301 . + 0 ID=cds-WP_032176060.1;Parent=gene-AC00_RS20820;Dbxref=GenBank:WP_032176060.1;Name=WP_032176060.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415129.1;locus_tag=AC00_RS20820;product=proofreading thioesterase EntH;protein_id=WP_032176060.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 21482 23587 . + . ID=gene-AC00_RS20815;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=AC00_RS20815;old_locus_tag=AC00_0638 NZ_JJLU01000024.1 Protein Homology CDS 21482 23587 . + 0 ID=cds-WP_001624841.1;Parent=gene-AC00_RS20815;Dbxref=GenBank:WP_001624841.1;Name=WP_001624841.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415130.1;locus_tag=AC00_RS20815;product=pyruvate/proton symporter CstA;protein_id=WP_001624841.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 23769 23966 . + . ID=gene-AC00_RS20810;Name=ybdD;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=AC00_RS20810;old_locus_tag=AC00_0639 NZ_JJLU01000024.1 Protein Homology CDS 23769 23966 . + 0 ID=cds-WP_000460431.1;Parent=gene-AC00_RS20810;Dbxref=GenBank:WP_000460431.1;Name=WP_000460431.1;gbkey=CDS;gene=ybdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=AC00_RS20810;product=YbdD/YjiX family protein;protein_id=WP_000460431.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 23976 25064 . - . ID=gene-AC00_RS20805;Name=hcxA;gbkey=Gene;gene=hcxA;gene_biotype=protein_coding;locus_tag=AC00_RS20805;old_locus_tag=AC00_0640 NZ_JJLU01000024.1 Protein Homology CDS 23976 25064 . - 0 ID=cds-WP_032280474.1;Parent=gene-AC00_RS20805;Dbxref=GenBank:WP_032280474.1;Name=WP_032280474.1;gbkey=CDS;gene=hcxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308665.1;locus_tag=AC00_RS20805;product=hydroxycarboxylate dehydrogenase HcxA;protein_id=WP_032280474.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 25173 26333 . + . ID=gene-AC00_RS20800;Name=ybdL;gbkey=Gene;gene=ybdL;gene_biotype=protein_coding;locus_tag=AC00_RS20800;old_locus_tag=AC00_0641 NZ_JJLU01000024.1 Protein Homology CDS 25173 26333 . + 0 ID=cds-WP_032280476.1;Parent=gene-AC00_RS20800;Dbxref=GenBank:WP_032280476.1;Name=WP_032280476.1;gbkey=CDS;gene=ybdL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308666.1;locus_tag=AC00_RS20800;product=methionine-oxo-acid transaminase;protein_id=WP_032280476.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 26334 26963 . - . ID=gene-AC00_RS20795;Name=ybdM;gbkey=Gene;gene=ybdM;gene_biotype=protein_coding;locus_tag=AC00_RS20795;old_locus_tag=AC00_0642 NZ_JJLU01000024.1 Protein Homology CDS 26334 26963 . - 0 ID=cds-WP_077757354.1;Parent=gene-AC00_RS20795;Dbxref=GenBank:WP_077757354.1;Name=WP_077757354.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;gene=ybdM;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415134.1;locus_tag=AC00_RS20795;product=IbrB-like domain-containing protein;protein_id=WP_077757354.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 26936 28156 . - . ID=gene-AC00_RS20790;Name=ybdN;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=AC00_RS20790;old_locus_tag=AC00_0643 NZ_JJLU01000024.1 Protein Homology CDS 26936 28156 . - 0 ID=cds-WP_032280478.1;Parent=gene-AC00_RS20790;Dbxref=GenBank:WP_032280478.1;Name=WP_032280478.1;gbkey=CDS;gene=ybdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308668.1;locus_tag=AC00_RS20790;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_032280478.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 28303 29205 . - . ID=gene-AC00_RS20785;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=AC00_RS20785;old_locus_tag=AC00_0644 NZ_JJLU01000024.1 Protein Homology CDS 28303 29205 . - 0 ID=cds-WP_000183532.1;Parent=gene-AC00_RS20785;Dbxref=GenBank:WP_000183532.1;Name=WP_000183532.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308669.1;locus_tag=AC00_RS20785;product=DNA-binding transcriptional repressor CitR;protein_id=WP_000183532.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 29416 30162 . - . ID=gene-AC00_RS20780;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=AC00_RS20780;old_locus_tag=AC00_0645 NZ_JJLU01000024.1 Protein Homology CDS 29416 30162 . - 0 ID=cds-WP_000913829.1;Parent=gene-AC00_RS20780;Dbxref=GenBank:WP_000913829.1;Name=WP_000913829.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415137.2;locus_tag=AC00_RS20780;product=thiol:disulfide interchange protein DsbG;protein_id=WP_000913829.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 30534 31097 . + . ID=gene-AC00_RS20775;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=AC00_RS20775;old_locus_tag=AC00_0646 NZ_JJLU01000024.1 Protein Homology CDS 30534 31097 . + 0 ID=cds-WP_000052796.1;Parent=gene-AC00_RS20775;Dbxref=GenBank:WP_000052796.1;Name=WP_000052796.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=AC00_RS20775;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_000052796.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 31226 32791 . + . ID=gene-AC00_RS20770;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=AC00_RS20770;old_locus_tag=AC00_0647 NZ_JJLU01000024.1 Protein Homology CDS 31226 32791 . + 0 ID=cds-WP_000887629.1;Parent=gene-AC00_RS20770;Dbxref=GenBank:WP_000887629.1;Name=WP_000887629.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=AC00_RS20770;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_000887629.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 32912 33340 . - . ID=gene-AC00_RS20765;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=AC00_RS20765;old_locus_tag=AC00_0648 NZ_JJLU01000024.1 Protein Homology CDS 32912 33340 . - 0 ID=cds-WP_000278505.1;Parent=gene-AC00_RS20765;Dbxref=GenBank:WP_000278505.1;Name=WP_000278505.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308673.1;locus_tag=AC00_RS20765;product=universal stress protein UspG;protein_id=WP_000278505.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 33561 34799 . + . ID=gene-AC00_RS20760;Name=ybdR;gbkey=Gene;gene=ybdR;gene_biotype=protein_coding;locus_tag=AC00_RS20760;old_locus_tag=AC00_0649 NZ_JJLU01000024.1 Protein Homology CDS 33561 34799 . + 0 ID=cds-WP_000646150.1;Parent=gene-AC00_RS20760;Dbxref=GenBank:WP_000646150.1;Name=WP_000646150.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;gene=ybdR;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308674.1;locus_tag=AC00_RS20760;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_000646150.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 34803 34991 . - . ID=gene-AC00_RS31690;Name=yldA;gbkey=Gene;gene=yldA;gene_biotype=protein_coding;locus_tag=AC00_RS31690;old_locus_tag=AC00_0650 NZ_JJLU01000024.1 Protein Homology CDS 34803 34991 . - 0 ID=cds-WP_001301130.1;Parent=gene-AC00_RS31690;Dbxref=GenBank:WP_001301130.1;Name=WP_001301130.1;gbkey=CDS;gene=yldA;inference=COORDINATES: protein motif:HMM:NF041476.1;locus_tag=AC00_RS31690;product=small membrane protein YldA;protein_id=WP_001301130.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 35030 35440 . - . ID=gene-AC00_RS20750;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=AC00_RS20750;old_locus_tag=AC00_0651 NZ_JJLU01000024.1 Protein Homology CDS 35030 35440 . - 0 ID=cds-WP_000089731.1;Parent=gene-AC00_RS20750;Dbxref=GenBank:WP_000089731.1;Name=WP_000089731.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308676.1;locus_tag=AC00_RS20750;product=nucleoside diphosphate kinase regulator;protein_id=WP_000089731.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 35670 36476 . - . ID=gene-AC00_RS20745;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=AC00_RS20745;old_locus_tag=AC00_0652 NZ_JJLU01000024.1 Protein Homology CDS 35670 36476 . - 0 ID=cds-WP_001295857.1;Parent=gene-AC00_RS20745;Dbxref=GenBank:WP_001295857.1;Name=WP_001295857.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308677.1;locus_tag=AC00_RS20745;product=ribonuclease I;protein_id=WP_001295857.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 36590 38053 . - . ID=gene-AC00_RS20740;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=AC00_RS20740;old_locus_tag=AC00_0653 NZ_JJLU01000024.1 Protein Homology CDS 36590 38053 . - 0 ID=cds-WP_032280479.1;Parent=gene-AC00_RS20740;Dbxref=GenBank:WP_032280479.1;Name=WP_032280479.1;gbkey=CDS;gene=citT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308678.1;locus_tag=AC00_RS20740;product=citrate/succinate antiporter CitT;protein_id=WP_032280479.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 38104 38982 . - . ID=gene-AC00_RS20735;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=AC00_RS20735;old_locus_tag=AC00_0654 NZ_JJLU01000024.1 Protein Homology CDS 38104 38982 . - 0 ID=cds-WP_032288168.1;Parent=gene-AC00_RS20735;Dbxref=GenBank:WP_032288168.1;Name=WP_032288168.1;gbkey=CDS;gene=citG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415146.1;locus_tag=AC00_RS20735;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_032288168.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 38957 39508 . - . ID=gene-AC00_RS20730;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=AC00_RS20730;old_locus_tag=AC00_0655 NZ_JJLU01000024.1 Protein Homology CDS 38957 39508 . - 0 ID=cds-WP_032280480.1;Parent=gene-AC00_RS20730;Dbxref=GenBank:WP_032280480.1;Name=WP_032280480.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308680.1;locus_tag=AC00_RS20730;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_032280480.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 39512 41044 . - . ID=gene-AC00_RS20725;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=AC00_RS20725;old_locus_tag=AC00_0656 NZ_JJLU01000024.1 Protein Homology CDS 39512 41044 . - 0 ID=cds-WP_000192245.1;Parent=gene-AC00_RS20725;Dbxref=GenBank:WP_000192245.1;Name=WP_000192245.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415148.1;locus_tag=AC00_RS20725;product=citrate lyase subunit alpha;protein_id=WP_000192245.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 41055 41963 . - . ID=gene-AC00_RS20720;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=AC00_RS20720;old_locus_tag=AC00_0657 NZ_JJLU01000024.1 Protein Homology CDS 41055 41963 . - 0 ID=cds-WP_032280481.1;Parent=gene-AC00_RS20720;Dbxref=GenBank:WP_032280481.1;Name=WP_032280481.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415149.4;locus_tag=AC00_RS20720;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_032280481.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 41960 42256 . - . ID=gene-AC00_RS20715;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=AC00_RS20715;old_locus_tag=AC00_0658 NZ_JJLU01000024.1 Protein Homology CDS 41960 42256 . - 0 ID=cds-WP_000700703.1;Parent=gene-AC00_RS20715;Dbxref=GenBank:WP_000700703.1;Name=WP_000700703.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308683.1;locus_tag=AC00_RS20715;product=citrate lyase acyl carrier protein;protein_id=WP_000700703.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 42271 43329 . - . ID=gene-AC00_RS20710;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=AC00_RS20710;old_locus_tag=AC00_0659 NZ_JJLU01000024.1 Protein Homology CDS 42271 43329 . - 0 ID=cds-WP_000467695.1;Parent=gene-AC00_RS20710;Dbxref=GenBank:WP_000467695.1;Name=WP_000467695.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415151.4;locus_tag=AC00_RS20710;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_000467695.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 43709 45367 . + . ID=gene-AC00_RS20705;Name=dpiB;gbkey=Gene;gene=dpiB;gene_biotype=protein_coding;locus_tag=AC00_RS20705;old_locus_tag=AC00_0660 NZ_JJLU01000024.1 Protein Homology CDS 43709 45367 . + 0 ID=cds-WP_032280482.1;Parent=gene-AC00_RS20705;Dbxref=GenBank:WP_032280482.1;Name=WP_032280482.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=dpiB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308685.1;locus_tag=AC00_RS20705;product=sensor histidine kinase DpiB;protein_id=WP_032280482.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 45336 46016 . + . ID=gene-AC00_RS20700;Name=dpiA;gbkey=Gene;gene=dpiA;gene_biotype=protein_coding;gene_synonym=citB;locus_tag=AC00_RS20700;old_locus_tag=AC00_0661 NZ_JJLU01000024.1 Protein Homology CDS 45336 46016 . + 0 ID=cds-WP_000126500.1;Parent=gene-AC00_RS20700;Dbxref=GenBank:WP_000126500.1;Name=WP_000126500.1;gbkey=CDS;gene=dpiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308686.1;locus_tag=AC00_RS20700;product=two-component response regulator DpiA;protein_id=WP_000126500.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 46057 47442 . - . ID=gene-AC00_RS20695;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC00_RS20695;old_locus_tag=AC00_0662 NZ_JJLU01000024.1 Protein Homology CDS 46057 47442 . - 0 ID=cds-WP_000955063.1;Parent=gene-AC00_RS20695;Dbxref=GenBank:WP_000955063.1;Name=WP_000955063.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308687.1;locus_tag=AC00_RS20695;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_000955063.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 48028 48588 . + . ID=gene-AC00_RS20690;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=AC00_RS20690;old_locus_tag=AC00_0664 NZ_JJLU01000024.1 Protein Homology CDS 48028 48588 . + 0 ID=cds-WP_001307667.1;Parent=gene-AC00_RS20690;Dbxref=GenBank:WP_001307667.1;Name=WP_001307667.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415155.1;locus_tag=AC00_RS20690;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_001307667.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 48763 48972 . + . ID=gene-AC00_RS20685;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC00_RS20685;old_locus_tag=AC00_0665 NZ_JJLU01000024.1 Protein Homology CDS 48763 48972 . + 0 ID=cds-WP_000034825.1;Parent=gene-AC00_RS20685;Dbxref=GenBank:WP_000034825.1;Name=WP_000034825.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308689.1;locus_tag=AC00_RS20685;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000034825.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 49026 49409 . - . ID=gene-AC00_RS20680;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=AC00_RS20680;old_locus_tag=AC00_0666 NZ_JJLU01000024.1 Protein Homology CDS 49026 49409 . - 0 ID=cds-WP_000939738.1;Parent=gene-AC00_RS20680;Dbxref=GenBank:WP_000939738.1;Name=WP_000939738.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=AC00_RS20680;product=fluoride efflux transporter CrcB;protein_id=WP_000939738.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 49502 50290 . + . ID=gene-AC00_RS20675;Name=AC00_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20675;old_locus_tag=AC00_0667 NZ_JJLU01000024.1 Protein Homology CDS 49502 50290 . + 0 ID=cds-WP_000959109.1;Parent=gene-AC00_RS20675;Dbxref=GenBank:WP_000959109.1;Name=WP_000959109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308691.1;locus_tag=AC00_RS20675;product=deaminated glutathione amidase;protein_id=WP_000959109.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 50419 50622 . + . ID=gene-AC00_RS20670;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=AC00_RS20670;old_locus_tag=AC00_0668 NZ_JJLU01000024.1 Protein Homology CDS 50419 50622 . + 0 ID=cds-WP_000503931.1;Parent=gene-AC00_RS20670;Dbxref=GenBank:WP_000503931.1;Name=WP_000503931.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=AC00_RS20670;product=twin-arginine translocase subunit TatE;protein_id=WP_000503931.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 50723 51688 . - . ID=gene-AC00_RS20665;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AC00_RS20665;old_locus_tag=AC00_0669 NZ_JJLU01000024.1 Protein Homology CDS 50723 51688 . - 0 ID=cds-WP_000042622.1;Parent=gene-AC00_RS20665;Dbxref=GenBank:WP_000042622.1;Name=WP_000042622.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=AC00_RS20665;product=lipoyl synthase;protein_id=WP_000042622.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 51897 52850 . - . ID=gene-AC00_RS20660;Name=ybeF;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=AC00_RS20660;old_locus_tag=AC00_0671 NZ_JJLU01000024.1 Protein Homology CDS 51897 52850 . - 0 ID=cds-WP_000378030.1;Parent=gene-AC00_RS20660;Dbxref=GenBank:WP_000378030.1;Name=WP_000378030.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ybeF;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308694.2;locus_tag=AC00_RS20660;product=YbeF family transcriptional regulator;protein_id=WP_000378030.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 53110 53751 . - . ID=gene-AC00_RS20655;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AC00_RS20655;old_locus_tag=AC00_0672 NZ_JJLU01000024.1 Protein Homology CDS 53110 53751 . - 0 ID=cds-WP_000284027.1;Parent=gene-AC00_RS20655;Dbxref=GenBank:WP_000284027.1;Name=WP_000284027.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=AC00_RS20655;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_000284027.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 53852 54115 . - . ID=gene-AC00_RS20650;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=AC00_RS20650;old_locus_tag=AC00_0673 NZ_JJLU01000024.1 Protein Homology CDS 53852 54115 . - 0 ID=cds-WP_000850550.1;Parent=gene-AC00_RS20650;Dbxref=GenBank:WP_000850550.1;Name=WP_000850550.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=AC00_RS20650;product=DUF493 family protein YbeD;protein_id=WP_000850550.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 54225 55436 . - . ID=gene-AC00_RS20645;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=AC00_RS20645;old_locus_tag=AC00_0674 NZ_JJLU01000024.1 Protein Homology CDS 54225 55436 . - 0 ID=cds-WP_001092082.1;Parent=gene-AC00_RS20645;Dbxref=GenBank:WP_001092082.1;Name=WP_001092082.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=AC00_RS20645;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_001092082.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 55576 56664 . - . ID=gene-AC00_RS20640;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=AC00_RS20640;old_locus_tag=AC00_0675 NZ_JJLU01000024.1 Protein Homology CDS 55576 56664 . - 0 ID=cds-WP_021577129.1;Parent=gene-AC00_RS20640;Dbxref=GenBank:WP_021577129.1;Name=WP_021577129.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308698.1;locus_tag=AC00_RS20640;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_021577129.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 56675 57787 . - . ID=gene-AC00_RS20635;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=AC00_RS20635;old_locus_tag=AC00_0676 NZ_JJLU01000024.1 Protein Homology CDS 56675 57787 . - 0 ID=cds-WP_000131719.1;Parent=gene-AC00_RS20635;Dbxref=GenBank:WP_000131719.1;Name=WP_000131719.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=AC00_RS20635;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_000131719.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 57790 59691 . - . ID=gene-AC00_RS20630;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=AC00_RS20630;old_locus_tag=AC00_0677 NZ_JJLU01000024.1 Protein Homology CDS 57790 59691 . - 0 ID=cds-WP_000776191.1;Parent=gene-AC00_RS20630;Dbxref=GenBank:WP_000776191.1;Name=WP_000776191.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308700.1;locus_tag=AC00_RS20630;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_000776191.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 59722 60189 . - . ID=gene-AC00_RS20625;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AC00_RS20625;old_locus_tag=AC00_0678 NZ_JJLU01000024.1 Protein Homology CDS 59722 60189 . - 0 ID=cds-WP_000776104.1;Parent=gene-AC00_RS20625;Dbxref=GenBank:WP_000776104.1;Name=WP_000776104.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=AC00_RS20625;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_000776104.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 60193 60510 . - . ID=gene-AC00_RS20620;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=AC00_RS20620;old_locus_tag=AC00_0679 NZ_JJLU01000024.1 Protein Homology CDS 60193 60510 . - 0 ID=cds-WP_001161664.1;Parent=gene-AC00_RS20620;Dbxref=GenBank:WP_001161664.1;Name=WP_001161664.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=AC00_RS20620;product=ribosome silencing factor;protein_id=WP_001161664.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 60770 61381 . - . ID=gene-AC00_RS20615;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=AC00_RS20615;old_locus_tag=AC00_0680 NZ_JJLU01000024.1 Protein Homology CDS 60770 61381 . - 0 ID=cds-WP_032280483.1;Parent=gene-AC00_RS20615;Dbxref=GenBank:WP_032280483.1;Name=WP_032280483.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308703.1;locus_tag=AC00_RS20615;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_032280483.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 61405 62046 . - . ID=gene-AC00_RS20610;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=AC00_RS20610;old_locus_tag=AC00_0681 NZ_JJLU01000024.1 Protein Homology CDS 61405 62046 . - 0 ID=cds-WP_000838889.1;Parent=gene-AC00_RS20610;Dbxref=GenBank:WP_000838889.1;Name=WP_000838889.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415172.1;locus_tag=AC00_RS20610;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_000838889.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 62048 63079 . - . ID=gene-AC00_RS20605;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AC00_RS20605;old_locus_tag=AC00_0682 NZ_JJLU01000024.1 Protein Homology CDS 62048 63079 . - 0 ID=cds-WP_032280485.1;Parent=gene-AC00_RS20605;Dbxref=GenBank:WP_032280485.1;Name=WP_032280485.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=AC00_RS20605;product=DNA polymerase III subunit delta;protein_id=WP_032280485.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 63079 63660 . - . ID=gene-AC00_RS20600;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=AC00_RS20600;old_locus_tag=AC00_0683 NZ_JJLU01000024.1 Protein Homology CDS 63079 63660 . - 0 ID=cds-WP_001512520.1;Parent=gene-AC00_RS20600;Dbxref=GenBank:WP_001512520.1;Name=WP_001512520.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415174.1;locus_tag=AC00_RS20600;product=LPS assembly lipoprotein LptE;protein_id=WP_001512520.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 63675 66257 . - . ID=gene-AC00_RS20595;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AC00_RS20595;old_locus_tag=AC00_0684 NZ_JJLU01000024.1 Protein Homology CDS 63675 66257 . - 0 ID=cds-WP_032280498.1;Parent=gene-AC00_RS20595;Dbxref=GenBank:WP_032280498.1;Name=WP_032280498.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=AC00_RS20595;product=leucine--tRNA ligase;protein_id=WP_032280498.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 66493 66975 . + . ID=gene-AC00_RS20590;Name=ybeL;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=AC00_RS20590;old_locus_tag=AC00_0685 NZ_JJLU01000024.1 Protein Homology CDS 66493 66975 . + 0 ID=cds-WP_001044880.1;Parent=gene-AC00_RS20590;Dbxref=GenBank:WP_001044880.1;Name=WP_001044880.1;gbkey=CDS;gene=ybeL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=AC00_RS20590;product=zinc ribbon-containing protein;protein_id=WP_001044880.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 67045 68022 . - . ID=gene-AC00_RS20585;Name=ybeQ;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=AC00_RS20585;old_locus_tag=AC00_0686 NZ_JJLU01000024.1 Protein Homology CDS 67045 68022 . - 0 ID=cds-WP_000578189.1;Parent=gene-AC00_RS20585;Dbxref=GenBank:WP_000578189.1;Name=WP_000578189.1;gbkey=CDS;gene=ybeQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415177.4;locus_tag=AC00_RS20585;product=Sel1 family TPR-like repeat protein YbeQ;protein_id=WP_000578189.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 68186 68893 . + . ID=gene-AC00_RS20580;Name=ybeR;gbkey=Gene;gene=ybeR;gene_biotype=protein_coding;locus_tag=AC00_RS20580;old_locus_tag=AC00_0687 NZ_JJLU01000024.1 Protein Homology CDS 68186 68893 . + 0 ID=cds-WP_032280487.1;Parent=gene-AC00_RS20580;Dbxref=GenBank:WP_032280487.1;Name=WP_032280487.1;gbkey=CDS;gene=ybeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415178.1;locus_tag=AC00_RS20580;product=DUF1266 domain-containing protein;protein_id=WP_032280487.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 68890 70317 . + . ID=gene-AC00_RS20575;Name=djlB;gbkey=Gene;gene=djlB;gene_biotype=protein_coding;locus_tag=AC00_RS20575;old_locus_tag=AC00_0688 NZ_JJLU01000024.1 Protein Homology CDS 68890 70317 . + 0 ID=cds-WP_032280488.1;Parent=gene-AC00_RS20575;Dbxref=GenBank:WP_032280488.1;Name=WP_032280488.1;gbkey=CDS;gene=djlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308711.1;locus_tag=AC00_RS20575;product=J domain-containing protein;protein_id=WP_032280488.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 70327 70881 . - . ID=gene-AC00_RS20570;Name=ybeT;gbkey=Gene;gene=ybeT;gene_biotype=protein_coding;locus_tag=AC00_RS20570;old_locus_tag=AC00_0689 NZ_JJLU01000024.1 Protein Homology CDS 70327 70881 . - 0 ID=cds-WP_001035673.1;Parent=gene-AC00_RS20570;Dbxref=GenBank:WP_001035673.1;Name=WP_001035673.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybeT;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308712.1;locus_tag=AC00_RS20570;product=tetratricopeptide repeat protein;protein_id=WP_001035673.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 70983 71690 . + . ID=gene-AC00_RS20565;Name=ybeU;gbkey=Gene;gene=ybeU;gene_biotype=protein_coding;locus_tag=AC00_RS20565;old_locus_tag=AC00_0690 NZ_JJLU01000024.1 Protein Homology CDS 70983 71690 . + 0 ID=cds-WP_032280489.1;Parent=gene-AC00_RS20565;Dbxref=GenBank:WP_032280489.1;Name=WP_032280489.1;gbkey=CDS;gene=ybeU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308713.1;locus_tag=AC00_RS20565;product=DUF1266 domain-containing protein;protein_id=WP_032280489.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 71687 73138 . + . ID=gene-AC00_RS20560;Name=djlC;gbkey=Gene;gene=djlC;gene_biotype=protein_coding;locus_tag=AC00_RS20560;old_locus_tag=AC00_0691 NZ_JJLU01000024.1 Protein Homology CDS 71687 73138 . + 0 ID=cds-WP_032288169.1;Parent=gene-AC00_RS20560;Dbxref=GenBank:WP_032288169.1;Name=WP_032288169.1;gbkey=CDS;gene=djlC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415182.1;locus_tag=AC00_RS20560;product=co-chaperone DjlC;protein_id=WP_032288169.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 73198 74868 . - . ID=gene-AC00_RS20555;Name=hscC;gbkey=Gene;gene=hscC;gene_biotype=protein_coding;locus_tag=AC00_RS20555;old_locus_tag=AC00_0692 NZ_JJLU01000024.1 Protein Homology CDS 73198 74868 . - 0 ID=cds-WP_032280492.1;Parent=gene-AC00_RS20555;Dbxref=GenBank:WP_032280492.1;Name=WP_032280492.1;gbkey=CDS;gene=hscC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415183.1;locus_tag=AC00_RS20555;product=molecular chaperone HscC;protein_id=WP_032280492.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 74952 75887 . - . ID=gene-AC00_RS20550;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=AC00_RS20550;old_locus_tag=AC00_0693 NZ_JJLU01000024.1 Protein Homology CDS 74952 75887 . - 0 ID=cds-WP_032280493.1;Parent=gene-AC00_RS20550;Dbxref=GenBank:WP_032280493.1;Name=WP_032280493.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308717.1;locus_tag=AC00_RS20550;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_032280493.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 76005 76730 . - . ID=gene-AC00_RS20545;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=AC00_RS20545;old_locus_tag=AC00_0694 NZ_JJLU01000024.1 Protein Homology CDS 76005 76730 . - 0 ID=cds-WP_000631384.1;Parent=gene-AC00_RS20545;Dbxref=GenBank:WP_000631384.1;Name=WP_000631384.1;gbkey=CDS;gene=gltL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=AC00_RS20545;product=glutamate/aspartate ABC transporter ATP-binding protein GltL;protein_id=WP_000631384.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 76730 77404 . - . ID=gene-AC00_RS20540;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=AC00_RS20540;old_locus_tag=AC00_0695 NZ_JJLU01000024.1 Protein Homology CDS 76730 77404 . - 0 ID=cds-WP_000272824.1;Parent=gene-AC00_RS20540;Dbxref=GenBank:WP_000272824.1;Name=WP_000272824.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308719.1;locus_tag=AC00_RS20540;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_000272824.1;transl_table=11 NZ_JJLU01000024.1 RefSeq pseudogene 77404 77901 . - . ID=gene-AC00_RS20535;Name=gltJ;end_range=77901,.;gbkey=Gene;gene=gltJ;gene_biotype=pseudogene;locus_tag=AC00_RS20535;old_locus_tag=AC00_0696;partial=true;pseudo=true NZ_JJLU01000024.1 Protein Homology CDS 77404 77901 . - 0 ID=cds-AC00_RS20535;Parent=gene-AC00_RS20535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=77901,.;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=AC00_RS20535;partial=true;product=glutamate/aspartate ABC transporter permease GltJ;pseudo=true;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 77935 80940 . - . ID=gene-AC00_RS20530;Name=AC00_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20530;old_locus_tag=AC00_0697 NZ_JJLU01000024.1 Protein Homology CDS 77935 80940 . - 0 ID=cds-WP_001143760.1;Parent=gene-AC00_RS20530;Dbxref=GenBank:WP_001143760.1;Name=WP_001143760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=AC00_RS20530;product=Tn3-like element Tn3 family transposase;protein_id=WP_001143760.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 81104 81661 . + . ID=gene-AC00_RS20525;Name=AC00_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20525;old_locus_tag=AC00_0698 NZ_JJLU01000024.1 Protein Homology CDS 81104 81661 . + 0 ID=cds-WP_001235713.1;Parent=gene-AC00_RS20525;Dbxref=GenBank:WP_001235713.1;Name=WP_001235713.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=AC00_RS20525;product=recombinase family protein;protein_id=WP_001235713.1;transl_table=11 NZ_JJLU01000024.1 RefSeq gene 81844 82704 . + . ID=gene-AC00_RS20520;Name=AC00_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20520;old_locus_tag=AC00_0699 NZ_JJLU01000024.1 Protein Homology CDS 81844 82704 . + 0 ID=cds-WP_000027057.1;Parent=gene-AC00_RS20520;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AC00_RS20520;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 ##sequence-region NZ_JJLU01000025.1 1 74179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000025.1 RefSeq region 1 74179 . + . ID=NZ_JJLU01000025.1:1..74179;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000025.1 RefSeq pseudogene 1 119 . + . ID=gene-AC00_RS29315;Name=AC00_RS29315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29315;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000025.1 Protein Homology CDS 1 119 . + 2 ID=cds-AC00_RS29315;Parent=gene-AC00_RS29315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AC00_RS29315;partial=true;product=class A beta-lactamase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000025.1 RefSeq pseudogene 266 514 . - . ID=gene-AC00_RS20515;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=pseudogene;locus_tag=AC00_RS20515;old_locus_tag=AC00_0700;partial=true;pseudo=true;start_range=.,266 NZ_JJLU01000025.1 Protein Homology CDS 266 514 . - 0 ID=cds-AC00_RS20515;Parent=gene-AC00_RS20515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308720.1;locus_tag=AC00_RS20515;partial=true;product=glutamate/aspartate ABC transporter permease GltJ;pseudo=true;start_range=.,266;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 684 1592 . - . ID=gene-AC00_RS20510;Name=gltI;gbkey=Gene;gene=gltI;gene_biotype=protein_coding;locus_tag=AC00_RS20510;old_locus_tag=AC00_0701 NZ_JJLU01000025.1 Protein Homology CDS 684 1592 . - 0 ID=cds-WP_001177084.1;Parent=gene-AC00_RS20510;Dbxref=GenBank:WP_001177084.1;Name=WP_001177084.1;gbkey=CDS;gene=gltI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308721.1;locus_tag=AC00_RS20510;product=glutamate/aspartate ABC transporter substrate-binding protein GltI;protein_id=WP_001177084.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 1989 3527 . - . ID=gene-AC00_RS20505;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AC00_RS20505;old_locus_tag=AC00_0703 NZ_JJLU01000025.1 Protein Homology CDS 1989 3527 . - 0 ID=cds-WP_032280494.1;Parent=gene-AC00_RS20505;Dbxref=GenBank:WP_032280494.1;Name=WP_032280494.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308722.1;locus_tag=AC00_RS20505;product=apolipoprotein N-acyltransferase;protein_id=WP_032280494.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 3552 4430 . - . ID=gene-AC00_RS20500;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=AC00_RS20500;old_locus_tag=AC00_0704 NZ_JJLU01000025.1 Protein Homology CDS 3552 4430 . - 0 ID=cds-WP_001278605.1;Parent=gene-AC00_RS20500;Dbxref=GenBank:WP_001278605.1;Name=WP_001278605.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=AC00_RS20500;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_001278605.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 4520 4987 . - . ID=gene-AC00_RS20495;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AC00_RS20495;old_locus_tag=AC00_0705 NZ_JJLU01000025.1 Protein Homology CDS 4520 4987 . - 0 ID=cds-WP_000084469.1;Parent=gene-AC00_RS20495;Dbxref=GenBank:WP_000084469.1;Name=WP_000084469.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=AC00_RS20495;product=rRNA maturation RNase YbeY;protein_id=WP_000084469.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 4984 6024 . - . ID=gene-AC00_RS20490;Name=ybeZ;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=AC00_RS20490;old_locus_tag=AC00_0706 NZ_JJLU01000025.1 Protein Homology CDS 4984 6024 . - 0 ID=cds-WP_001018040.1;Parent=gene-AC00_RS20490;Dbxref=GenBank:WP_001018040.1;Name=WP_001018040.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybeZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415193.2;locus_tag=AC00_RS20490;product=PhoH family protein;protein_id=WP_001018040.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 6177 7601 . - . ID=gene-AC00_RS20485;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AC00_RS20485;old_locus_tag=AC00_0708 NZ_JJLU01000025.1 Protein Homology CDS 6177 7601 . - 0 ID=cds-WP_000162740.1;Parent=gene-AC00_RS20485;Dbxref=GenBank:WP_000162740.1;Name=WP_000162740.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308726.1;locus_tag=AC00_RS20485;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_000162740.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 7747 8922 . + . ID=gene-AC00_RS20480;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=AC00_RS20480;old_locus_tag=AC00_0709 NZ_JJLU01000025.1 Protein Homology CDS 7747 8922 . + 0 ID=cds-WP_032280496.1;Parent=gene-AC00_RS20480;Dbxref=GenBank:WP_032280496.1;Name=WP_032280496.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415195.1;locus_tag=AC00_RS20480;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_032280496.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 9076 9150 . - . ID=gene-AC00_RS20475;Name=AC00_RS20475;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20475;old_locus_tag=AC00_0710 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9076 9150 . - . ID=rna-AC00_RS20475;Parent=gene-AC00_RS20475;anticodon=(pos:complement(9116..9118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20475;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9076 9150 . - . ID=exon-AC00_RS20475-1;Parent=rna-AC00_RS20475;anticodon=(pos:complement(9116..9118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20475;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 9188 9262 . - . ID=gene-AC00_RS20470;Name=AC00_RS20470;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20470;old_locus_tag=AC00_0711 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9188 9262 . - . ID=rna-AC00_RS20470;Parent=gene-AC00_RS20470;anticodon=(pos:complement(9228..9230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20470;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9188 9262 . - . ID=exon-AC00_RS20470-1;Parent=rna-AC00_RS20470;anticodon=(pos:complement(9228..9230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20470;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 9300 9374 . - . ID=gene-AC00_RS20465;Name=AC00_RS20465;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20465;old_locus_tag=AC00_0712 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9300 9374 . - . ID=rna-AC00_RS20465;Parent=gene-AC00_RS20465;anticodon=(pos:complement(9340..9342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20465;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9300 9374 . - . ID=exon-AC00_RS20465-1;Parent=rna-AC00_RS20465;anticodon=(pos:complement(9340..9342));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20465;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 9412 9486 . - . ID=gene-AC00_RS20460;Name=AC00_RS20460;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20460;old_locus_tag=AC00_0713 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9412 9486 . - . ID=rna-AC00_RS20460;Parent=gene-AC00_RS20460;anticodon=(pos:complement(9452..9454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20460;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9412 9486 . - . ID=exon-AC00_RS20460-1;Parent=rna-AC00_RS20460;anticodon=(pos:complement(9452..9454));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20460;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 9534 9610 . - . ID=gene-AC00_RS20455;Name=AC00_RS20455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20455;old_locus_tag=AC00_0714 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9534 9610 . - . ID=rna-AC00_RS20455;Parent=gene-AC00_RS20455;anticodon=(pos:complement(9574..9576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20455;product=tRNA-Met NZ_JJLU01000025.1 tRNAscan-SE exon 9534 9610 . - . ID=exon-AC00_RS20455-1;Parent=rna-AC00_RS20455;anticodon=(pos:complement(9574..9576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20455;product=tRNA-Met NZ_JJLU01000025.1 RefSeq gene 9626 9700 . - . ID=gene-AC00_RS20450;Name=AC00_RS20450;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20450;old_locus_tag=AC00_0715 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9626 9700 . - . ID=rna-AC00_RS20450;Parent=gene-AC00_RS20450;anticodon=(pos:complement(9666..9668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20450;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9626 9700 . - . ID=exon-AC00_RS20450-1;Parent=rna-AC00_RS20450;anticodon=(pos:complement(9666..9668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20450;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 9735 9809 . - . ID=gene-AC00_RS20445;Name=AC00_RS20445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20445;old_locus_tag=AC00_0716 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9735 9809 . - . ID=rna-AC00_RS20445;Parent=gene-AC00_RS20445;anticodon=(pos:complement(9775..9777));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20445;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9735 9809 . - . ID=exon-AC00_RS20445-1;Parent=rna-AC00_RS20445;anticodon=(pos:complement(9775..9777));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20445;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 9844 9918 . - . ID=gene-AC00_RS20440;Name=AC00_RS20440;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20440;old_locus_tag=AC00_0717 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9844 9918 . - . ID=rna-AC00_RS20440;Parent=gene-AC00_RS20440;anticodon=(pos:complement(9884..9886));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20440;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9844 9918 . - . ID=exon-AC00_RS20440-1;Parent=rna-AC00_RS20440;anticodon=(pos:complement(9884..9886));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20440;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 9953 10027 . - . ID=gene-AC00_RS20435;Name=AC00_RS20435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20435;old_locus_tag=AC00_0718 NZ_JJLU01000025.1 tRNAscan-SE tRNA 9953 10027 . - . ID=rna-AC00_RS20435;Parent=gene-AC00_RS20435;anticodon=(pos:complement(9993..9995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20435;product=tRNA-Gln NZ_JJLU01000025.1 tRNAscan-SE exon 9953 10027 . - . ID=exon-AC00_RS20435-1;Parent=rna-AC00_RS20435;anticodon=(pos:complement(9993..9995));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20435;product=tRNA-Gln NZ_JJLU01000025.1 RefSeq gene 10051 10135 . - . ID=gene-AC00_RS20430;Name=AC00_RS20430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20430;old_locus_tag=AC00_0719 NZ_JJLU01000025.1 tRNAscan-SE tRNA 10051 10135 . - . ID=rna-AC00_RS20430;Parent=gene-AC00_RS20430;anticodon=(pos:complement(10099..10101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20430;product=tRNA-Leu NZ_JJLU01000025.1 tRNAscan-SE exon 10051 10135 . - . ID=exon-AC00_RS20430-1;Parent=rna-AC00_RS20430;anticodon=(pos:complement(10099..10101));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20430;product=tRNA-Leu NZ_JJLU01000025.1 RefSeq gene 10144 10220 . - . ID=gene-AC00_RS20425;Name=AC00_RS20425;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20425;old_locus_tag=AC00_0720 NZ_JJLU01000025.1 tRNAscan-SE tRNA 10144 10220 . - . ID=rna-AC00_RS20425;Parent=gene-AC00_RS20425;anticodon=(pos:complement(10184..10186));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20425;product=tRNA-Met NZ_JJLU01000025.1 tRNAscan-SE exon 10144 10220 . - . ID=exon-AC00_RS20425-1;Parent=rna-AC00_RS20425;anticodon=(pos:complement(10184..10186));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20425;product=tRNA-Met NZ_JJLU01000025.1 RefSeq gene 10600 12264 . - . ID=gene-AC00_RS20420;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=AC00_RS20420;old_locus_tag=AC00_0721 NZ_JJLU01000025.1 Protein Homology CDS 10600 12264 . - 0 ID=cds-WP_000337081.1;Parent=gene-AC00_RS20420;Dbxref=GenBank:WP_000337081.1;Name=WP_000337081.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=AC00_RS20420;product=asparagine synthase B;protein_id=WP_000337081.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 12521 13273 . - . ID=gene-AC00_RS20415;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=AC00_RS20415;old_locus_tag=AC00_0723 NZ_JJLU01000025.1 Protein Homology CDS 12521 13273 . - 0 ID=cds-WP_000153129.1;Parent=gene-AC00_RS20415;Dbxref=GenBank:WP_000153129.1;Name=WP_000153129.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308732.1;locus_tag=AC00_RS20415;product=ribonucleotide monophosphatase NagD;protein_id=WP_000153129.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 13321 14541 . - . ID=gene-AC00_RS20410;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=AC00_RS20410;old_locus_tag=AC00_0724 NZ_JJLU01000025.1 Protein Homology CDS 13321 14541 . - 0 ID=cds-WP_000187594.1;Parent=gene-AC00_RS20410;Dbxref=GenBank:WP_000187594.1;Name=WP_000187594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308733.1;locus_tag=AC00_RS20410;product=DNA-binding transcriptional regulator NagC;protein_id=WP_000187594.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 14550 15698 . - . ID=gene-AC00_RS20405;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AC00_RS20405;old_locus_tag=AC00_0725 NZ_JJLU01000025.1 Protein Homology CDS 14550 15698 . - 0 ID=cds-WP_032288171.1;Parent=gene-AC00_RS20405;Dbxref=GenBank:WP_032288171.1;Name=WP_032288171.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=AC00_RS20405;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_032288171.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 15758 16558 . - . ID=gene-AC00_RS20400;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AC00_RS20400;old_locus_tag=AC00_0726 NZ_JJLU01000025.1 Protein Homology CDS 15758 16558 . - 0 ID=cds-WP_021578412.1;Parent=gene-AC00_RS20400;Dbxref=GenBank:WP_021578412.1;Name=WP_021578412.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=AC00_RS20400;product=glucosamine-6-phosphate deaminase;protein_id=WP_021578412.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 16891 18837 . + . ID=gene-AC00_RS20395;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=AC00_RS20395;old_locus_tag=AC00_0728 NZ_JJLU01000025.1 Protein Homology CDS 16891 18837 . + 0 ID=cds-WP_032280505.1;Parent=gene-AC00_RS20395;Dbxref=GenBank:WP_032280505.1;Name=WP_032280505.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308736.1;locus_tag=AC00_RS20395;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_032280505.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 19105 20769 . + . ID=gene-AC00_RS20390;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=AC00_RS20390;old_locus_tag=AC00_0730 NZ_JJLU01000025.1 Protein Homology CDS 19105 20769 . + 0 ID=cds-WP_001287134.1;Parent=gene-AC00_RS20390;Dbxref=GenBank:WP_001287134.1;Name=WP_001287134.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308737.1;locus_tag=AC00_RS20390;product=glutamine--tRNA ligase;protein_id=WP_001287134.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 21349 22755 . + . ID=gene-AC00_RS20385;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=AC00_RS20385;old_locus_tag=AC00_0732 NZ_JJLU01000025.1 Protein Homology CDS 21349 22755 . + 0 ID=cds-WP_032280506.1;Parent=gene-AC00_RS20385;Dbxref=GenBank:WP_032280506.1;Name=WP_032280506.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415207.1;locus_tag=AC00_RS20385;product=chitoporin ChiP;protein_id=WP_032280506.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 22805 23104 . + . ID=gene-AC00_RS20380;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=AC00_RS20380;old_locus_tag=AC00_0733 NZ_JJLU01000025.1 Protein Homology CDS 22805 23104 . + 0 ID=cds-WP_032280507.1;Parent=gene-AC00_RS20380;Dbxref=GenBank:WP_032280507.1;Name=WP_032280507.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308740.1;locus_tag=AC00_RS20380;product=ChiQ/YbfN family lipoprotein;protein_id=WP_032280507.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 23215 23661 . - . ID=gene-AC00_RS20375;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=AC00_RS20375;old_locus_tag=AC00_0734 NZ_JJLU01000025.1 Protein Homology CDS 23215 23661 . - 0 ID=cds-WP_000131702.1;Parent=gene-AC00_RS20375;Dbxref=GenBank:WP_000131702.1;Name=WP_000131702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=AC00_RS20375;product=ferric iron uptake transcriptional regulator;protein_id=WP_000131702.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 23654 23740 . - . ID=gene-AC00_RS0123905;Name=uof;gbkey=Gene;gene=uof;gene_biotype=protein_coding;locus_tag=AC00_RS0123905 NZ_JJLU01000025.1 Protein Homology CDS 23654 23740 . - 0 ID=cds-WP_001406816.1;Parent=gene-AC00_RS0123905;Dbxref=GenBank:WP_001406816.1;Name=WP_001406816.1;gbkey=CDS;gene=uof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001491546.1;locus_tag=AC00_RS0123905;product=fur leader peptide;protein_id=WP_001406816.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 23950 24480 . - . ID=gene-AC00_RS20370;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=AC00_RS20370;old_locus_tag=AC00_0735 NZ_JJLU01000025.1 Protein Homology CDS 23950 24480 . - 0 ID=cds-WP_001018618.1;Parent=gene-AC00_RS20370;Dbxref=GenBank:WP_001018618.1;Name=WP_001018618.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308742.1;locus_tag=AC00_RS20370;product=flavodoxin FldA;protein_id=WP_001018618.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 24620 24913 . - . ID=gene-AC00_RS20365;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=AC00_RS20365;old_locus_tag=AC00_0736 NZ_JJLU01000025.1 Protein Homology CDS 24620 24913 . - 0 ID=cds-WP_001300829.1;Parent=gene-AC00_RS20365;Dbxref=GenBank:WP_001300829.1;Name=WP_001300829.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415211.2;locus_tag=AC00_RS20365;product=LexA regulated protein;protein_id=WP_001300829.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 25053 25817 . - . ID=gene-AC00_RS20360;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=AC00_RS20360;old_locus_tag=AC00_0737 NZ_JJLU01000025.1 Protein Homology CDS 25053 25817 . - 0 ID=cds-WP_000773296.1;Parent=gene-AC00_RS20360;Dbxref=GenBank:WP_000773296.1;Name=WP_000773296.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706538.1;locus_tag=AC00_RS20360;product=esterase;protein_id=WP_000773296.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 26002 26547 . + . ID=gene-AC00_RS20355;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=AC00_RS20355;old_locus_tag=AC00_0738 NZ_JJLU01000025.1 Protein Homology CDS 26002 26547 . + 0 ID=cds-WP_000848387.1;Parent=gene-AC00_RS20355;Dbxref=GenBank:WP_000848387.1;Name=WP_000848387.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=AC00_RS20355;product=replication initiation negative regulator SeqA;protein_id=WP_000848387.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 26573 28213 . + . ID=gene-AC00_RS20350;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=AC00_RS20350;old_locus_tag=AC00_0739 NZ_JJLU01000025.1 Protein Homology CDS 26573 28213 . + 0 ID=cds-WP_001297249.1;Parent=gene-AC00_RS20350;Dbxref=GenBank:WP_001297249.1;Name=WP_001297249.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=AC00_RS20350;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_001297249.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 28269 29588 . - . ID=gene-AC00_RS20345;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=AC00_RS20345;old_locus_tag=AC00_0740 NZ_JJLU01000025.1 Protein Homology CDS 28269 29588 . - 0 ID=cds-WP_000075845.1;Parent=gene-AC00_RS20345;Dbxref=GenBank:WP_000075845.1;Name=WP_000075845.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415219.1;locus_tag=AC00_RS20345;product=putrescine-ornithine antiporter;protein_id=WP_000075845.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 29585 31783 . - . ID=gene-AC00_RS20340;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=AC00_RS20340;old_locus_tag=AC00_0741 NZ_JJLU01000025.1 Protein Homology CDS 29585 31783 . - 0 ID=cds-WP_001292415.1;Parent=gene-AC00_RS20340;Dbxref=GenBank:WP_001292415.1;Name=WP_001292415.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308748.1;locus_tag=AC00_RS20340;product=ornithine decarboxylase SpeF;protein_id=WP_001292415.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 32218 32322 . - . ID=gene-AC00_RS30190;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=AC00_RS30190 NZ_JJLU01000025.1 Protein Homology CDS 32218 32322 . - 0 ID=cds-WP_001312672.1;Parent=gene-AC00_RS30190;Dbxref=GenBank:WP_001312672.1;Name=WP_001312672.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=AC00_RS30190;product=leader peptide SpeFL;protein_id=WP_001312672.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 32301 32435 . - . ID=gene-AC00_RS31620;Name=AC00_RS31620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31620 NZ_JJLU01000025.1 Protein Homology CDS 32301 32435 . - 0 ID=cds-WP_001299172.1;Parent=gene-AC00_RS31620;Dbxref=GenBank:WP_001299172.1;Name=WP_001299172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001417766.1;locus_tag=AC00_RS31620;product=hypothetical protein;protein_id=WP_001299172.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 32597 33274 . - . ID=gene-AC00_RS20335;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=AC00_RS20335;old_locus_tag=AC00_0743 NZ_JJLU01000025.1 Protein Homology CDS 32597 33274 . - 0 ID=cds-WP_032280508.1;Parent=gene-AC00_RS20335;Dbxref=GenBank:WP_032280508.1;Name=WP_032280508.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=AC00_RS20335;product=two-component system response regulator KdpE;protein_id=WP_032280508.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 33271 35955 . - . ID=gene-AC00_RS20330;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=AC00_RS20330;old_locus_tag=AC00_0744 NZ_JJLU01000025.1 Protein Homology CDS 33271 35955 . - 0 ID=cds-WP_032280510.1;Parent=gene-AC00_RS20330;Dbxref=GenBank:WP_032280510.1;Name=WP_032280510.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308750.1;locus_tag=AC00_RS20330;product=two-component system sensor histidine kinase KdpD;protein_id=WP_032280510.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 35948 36520 . - . ID=gene-AC00_RS20325;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=AC00_RS20325;old_locus_tag=AC00_0745 NZ_JJLU01000025.1 Protein Homology CDS 35948 36520 . - 0 ID=cds-WP_032280511.1;Parent=gene-AC00_RS20325;Dbxref=GenBank:WP_032280511.1;Name=WP_032280511.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415224.1;locus_tag=AC00_RS20325;product=K(+)-transporting ATPase subunit C;protein_id=WP_032280511.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 36529 38577 . - . ID=gene-AC00_RS20320;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=AC00_RS20320;old_locus_tag=AC00_0746 NZ_JJLU01000025.1 Protein Homology CDS 36529 38577 . - 0 ID=cds-WP_032280512.1;Parent=gene-AC00_RS20320;Dbxref=GenBank:WP_032280512.1;Name=WP_032280512.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=AC00_RS20320;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_032280512.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 38600 40273 . - . ID=gene-AC00_RS20315;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=AC00_RS20315;old_locus_tag=AC00_0747 NZ_JJLU01000025.1 Protein Homology CDS 38600 40273 . - 0 ID=cds-WP_032280513.1;Parent=gene-AC00_RS20315;Dbxref=GenBank:WP_032280513.1;Name=WP_032280513.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706533.2;locus_tag=AC00_RS20315;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_032280513.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 40273 40362 . - . ID=gene-AC00_RS0123920;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=AC00_RS0123920 NZ_JJLU01000025.1 Protein Homology CDS 40273 40362 . - 0 ID=cds-WP_001365534.1;Parent=gene-AC00_RS0123920;Dbxref=GenBank:WP_001365534.1;Name=WP_001365534.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=AC00_RS0123920;product=K(+)-transporting ATPase subunit F;protein_id=WP_001365534.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 40675 40881 . + . ID=gene-AC00_RS20310;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=AC00_RS20310;old_locus_tag=AC00_0748 NZ_JJLU01000025.1 Protein Homology CDS 40675 40881 . + 0 ID=cds-WP_000424924.1;Parent=gene-AC00_RS20310;Dbxref=GenBank:WP_000424924.1;Name=WP_000424924.1;gbkey=CDS;gene=ybfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308755.1;locus_tag=AC00_RS20310;product=YbfA family protein;protein_id=WP_000424924.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 41666 42118 . + . ID=gene-AC00_RS20305;Name=AC00_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20305;old_locus_tag=AC00_0749 NZ_JJLU01000025.1 Protein Homology CDS 41666 42118 . + 0 ID=cds-WP_032280514.1;Parent=gene-AC00_RS20305;Dbxref=GenBank:WP_032280514.1;Name=WP_032280514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003570644.1;locus_tag=AC00_RS20305;product=DcrB-related protein;protein_id=WP_032280514.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 42137 46405 . + . ID=gene-AC00_RS20300;Name=AC00_RS20300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20300;old_locus_tag=AC00_0750 NZ_JJLU01000025.1 Protein Homology CDS 42137 46405 . + 0 ID=cds-WP_174218962.1;Parent=gene-AC00_RS20300;Dbxref=GenBank:WP_174218962.1;Name=WP_174218962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242640.1;locus_tag=AC00_RS20300;product=RHS repeat-associated core domain-containing protein;protein_id=WP_174218962.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 46402 46695 . + . ID=gene-AC00_RS20295;Name=AC00_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20295;old_locus_tag=AC00_0751 NZ_JJLU01000025.1 Protein Homology CDS 46402 46695 . + 0 ID=cds-WP_032280515.1;Parent=gene-AC00_RS20295;Dbxref=GenBank:WP_032280515.1;Name=WP_032280515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001017804.1;locus_tag=AC00_RS20295;product=hypothetical protein;protein_id=WP_032280515.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 46739 47068 . - . ID=gene-AC00_RS20290;Name=AC00_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20290;old_locus_tag=AC00_0752 NZ_JJLU01000025.1 Protein Homology CDS 46739 47068 . - 0 ID=cds-WP_032280516.1;Parent=gene-AC00_RS20290;Dbxref=GenBank:WP_032280516.1;Name=WP_032280516.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807561.1;locus_tag=AC00_RS20290;product=SymE family type I addiction module toxin;protein_id=WP_032280516.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 47197 47706 . + . ID=gene-AC00_RS20285;Name=ybgA;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=AC00_RS20285;old_locus_tag=AC00_0753 NZ_JJLU01000025.1 Protein Homology CDS 47197 47706 . + 0 ID=cds-WP_032280517.1;Parent=gene-AC00_RS20285;Dbxref=GenBank:WP_032280517.1;Name=WP_032280517.1;gbkey=CDS;gene=ybgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415235.1;locus_tag=AC00_RS20285;product=YbgA family protein;protein_id=WP_032280517.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 47703 49121 . + . ID=gene-AC00_RS20280;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=AC00_RS20280;old_locus_tag=AC00_0754 NZ_JJLU01000025.1 Protein Homology CDS 47703 49121 . + 0 ID=cds-WP_032280519.1;Parent=gene-AC00_RS20280;Dbxref=GenBank:WP_032280519.1;Name=WP_032280519.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308760.1;locus_tag=AC00_RS20280;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_032280519.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 49271 50752 . - . ID=gene-AC00_RS20275;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=AC00_RS20275;old_locus_tag=AC00_0755 NZ_JJLU01000025.1 Protein Homology CDS 49271 50752 . - 0 ID=cds-WP_001032697.1;Parent=gene-AC00_RS20275;Dbxref=GenBank:WP_001032697.1;Name=WP_001032697.1;gbkey=CDS;gene=dtpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308761.1;locus_tag=AC00_RS20275;product=dipeptide permease DtpD;protein_id=WP_001032697.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 51023 51766 . + . ID=gene-AC00_RS20270;Name=ybgI;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=AC00_RS20270;old_locus_tag=AC00_0756 NZ_JJLU01000025.1 Protein Homology CDS 51023 51766 . + 0 ID=cds-WP_000798871.1;Parent=gene-AC00_RS20270;Dbxref=GenBank:WP_000798871.1;Name=WP_000798871.1;gbkey=CDS;gene=ybgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=AC00_RS20270;product=radiation resistance protein YbgI;protein_id=WP_000798871.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 51789 52445 . + . ID=gene-AC00_RS20265;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=AC00_RS20265;old_locus_tag=AC00_0757 NZ_JJLU01000025.1 Protein Homology CDS 51789 52445 . + 0 ID=cds-WP_001188343.1;Parent=gene-AC00_RS20265;Dbxref=GenBank:WP_001188343.1;Name=WP_001188343.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=AC00_RS20265;product=5-oxoprolinase subunit PxpB;protein_id=WP_001188343.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 52439 53371 . + . ID=gene-AC00_RS20260;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=AC00_RS20260;old_locus_tag=AC00_0758 NZ_JJLU01000025.1 Protein Homology CDS 52439 53371 . + 0 ID=cds-WP_021523824.1;Parent=gene-AC00_RS20260;Dbxref=GenBank:WP_021523824.1;Name=WP_021523824.1;gbkey=CDS;gene=pxpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308764.1;locus_tag=AC00_RS20260;product=5-oxoprolinase subunit PxpC;protein_id=WP_021523824.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 53361 54095 . + . ID=gene-AC00_RS20255;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=AC00_RS20255;old_locus_tag=AC00_0759 NZ_JJLU01000025.1 Protein Homology CDS 53361 54095 . + 0 ID=cds-WP_032280520.1;Parent=gene-AC00_RS20255;Dbxref=GenBank:WP_032280520.1;Name=WP_032280520.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308765.1;locus_tag=AC00_RS20255;product=5-oxoprolinase subunit PxpA;protein_id=WP_032280520.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 54131 54922 . + . ID=gene-AC00_RS20250;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=AC00_RS20250;old_locus_tag=AC00_0760 NZ_JJLU01000025.1 Protein Homology CDS 54131 54922 . + 0 ID=cds-WP_001114031.1;Parent=gene-AC00_RS20250;Dbxref=GenBank:WP_001114031.1;Name=WP_001114031.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308766.1;locus_tag=AC00_RS20250;product=endonuclease VIII;protein_id=WP_001114031.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 54919 55965 . - . ID=gene-AC00_RS20245;Name=abrB;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=AC00_RS20245;old_locus_tag=AC00_0761 NZ_JJLU01000025.1 Protein Homology CDS 54919 55965 . - 0 ID=cds-WP_032280521.1;Parent=gene-AC00_RS20245;Dbxref=GenBank:WP_032280521.1;Name=WP_032280521.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=abrB;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415243.4;locus_tag=AC00_RS20245;product=AbrB family transcriptional regulator;protein_id=WP_032280521.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 56114 57175 . - . ID=gene-AC00_RS20240;Name=ybgO;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=AC00_RS20240;old_locus_tag=AC00_0762 NZ_JJLU01000025.1 Protein Homology CDS 56114 57175 . - 0 ID=cds-WP_032280522.1;Parent=gene-AC00_RS20240;Dbxref=GenBank:WP_032280522.1;Name=WP_032280522.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ybgO;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308768.1;locus_tag=AC00_RS20240;product=fimbrial protein;protein_id=WP_032280522.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 57172 57903 . - . ID=gene-AC00_RS20235;Name=AC00_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20235;old_locus_tag=AC00_0763 NZ_JJLU01000025.1 Protein Homology CDS 57172 57903 . - 0 ID=cds-WP_032280523.1;Parent=gene-AC00_RS20235;Dbxref=GenBank:WP_032280523.1;Name=WP_032280523.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308769.1;locus_tag=AC00_RS20235;product=fimbrial biogenesis chaperone;protein_id=WP_032280523.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 57918 60377 . - . ID=gene-AC00_RS20230;Name=AC00_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20230;old_locus_tag=AC00_0764 NZ_JJLU01000025.1 Protein Homology CDS 57918 60377 . - 0 ID=cds-WP_162722322.1;Parent=gene-AC00_RS20230;Dbxref=GenBank:WP_162722322.1;Name=WP_162722322.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706516.2;locus_tag=AC00_RS20230;product=fimbria/pilus outer membrane usher protein;protein_id=WP_162722322.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 60427 60993 . - . ID=gene-AC00_RS20225;Name=AC00_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20225;old_locus_tag=AC00_0765 NZ_JJLU01000025.1 Protein Homology CDS 60427 60993 . - 0 ID=cds-WP_000472402.1;Parent=gene-AC00_RS20225;Dbxref=GenBank:WP_000472402.1;Name=WP_000472402.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308771.2;locus_tag=AC00_RS20225;product=fimbrial protein;protein_id=WP_000472402.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 61380 62663 . - . ID=gene-AC00_RS20220;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=AC00_RS20220;old_locus_tag=AC00_0766 NZ_JJLU01000025.1 Protein Homology CDS 61380 62663 . - 0 ID=cds-WP_000785835.1;Parent=gene-AC00_RS20220;Dbxref=GenBank:WP_000785835.1;Name=WP_000785835.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308772.1;locus_tag=AC00_RS20220;product=citrate synthase;protein_id=WP_000785835.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 62869 62976 . - . ID=gene-AC00_RS30195;Name=AC00_RS30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30195 NZ_JJLU01000025.1 Protein Homology CDS 62869 62976 . - 0 ID=cds-WP_001305582.1;Parent=gene-AC00_RS30195;Dbxref=GenBank:WP_001305582.1;Name=WP_001305582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518759.1;locus_tag=AC00_RS30195;product=hypothetical protein;protein_id=WP_001305582.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 63357 63761 . + . ID=gene-AC00_RS0123930;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=AC00_RS0123930;old_locus_tag=AC00_0767 NZ_JJLU01000025.1 Protein Homology CDS 63357 63761 . + 0 ID=cds-WP_000263347.1;Parent=gene-AC00_RS0123930;Dbxref=GenBank:WP_000263347.1;Name=WP_000263347.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=AC00_RS0123930;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_000263347.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 63755 64102 . + . ID=gene-AC00_RS20215;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=AC00_RS20215;old_locus_tag=AC00_0768 NZ_JJLU01000025.1 Protein Homology CDS 63755 64102 . + 0 ID=cds-WP_000254365.1;Parent=gene-AC00_RS20215;Dbxref=GenBank:WP_000254365.1;Name=WP_000254365.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=AC00_RS20215;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_000254365.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 64102 65868 . + . ID=gene-AC00_RS20210;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AC00_RS20210;old_locus_tag=AC00_0769 NZ_JJLU01000025.1 Protein Homology CDS 64102 65868 . + 0 ID=cds-WP_000775540.1;Parent=gene-AC00_RS20210;Dbxref=GenBank:WP_000775540.1;Name=WP_000775540.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=AC00_RS20210;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_000775540.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 65884 66600 . + . ID=gene-AC00_RS20205;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=AC00_RS20205;old_locus_tag=AC00_0770 NZ_JJLU01000025.1 Protein Homology CDS 65884 66600 . + 0 ID=cds-WP_001235253.1;Parent=gene-AC00_RS20205;Dbxref=GenBank:WP_001235253.1;Name=WP_001235253.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=AC00_RS20205;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_001235253.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 66901 69702 . + . ID=gene-AC00_RS20200;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=AC00_RS20200;old_locus_tag=AC00_0772 NZ_JJLU01000025.1 Protein Homology CDS 66901 69702 . + 0 ID=cds-WP_001181473.1;Parent=gene-AC00_RS20200;Dbxref=GenBank:WP_001181473.1;Name=WP_001181473.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308778.1;locus_tag=AC00_RS20200;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_001181473.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 69717 70934 . + . ID=gene-AC00_RS20195;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AC00_RS20195;old_locus_tag=AC00_0773 NZ_JJLU01000025.1 Protein Homology CDS 69717 70934 . + 0 ID=cds-WP_032280525.1;Parent=gene-AC00_RS20195;Dbxref=GenBank:WP_032280525.1;Name=WP_032280525.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=AC00_RS20195;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_032280525.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 71210 72376 . + . ID=gene-AC00_RS20190;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AC00_RS20190;old_locus_tag=AC00_0774 NZ_JJLU01000025.1 Protein Homology CDS 71210 72376 . + 0 ID=cds-WP_001048608.1;Parent=gene-AC00_RS20190;Dbxref=GenBank:WP_001048608.1;Name=WP_001048608.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=AC00_RS20190;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_001048608.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 72376 73245 . + . ID=gene-AC00_RS20185;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AC00_RS20185;old_locus_tag=AC00_0775 NZ_JJLU01000025.1 Protein Homology CDS 72376 73245 . + 0 ID=cds-WP_000025458.1;Parent=gene-AC00_RS20185;Dbxref=GenBank:WP_000025458.1;Name=WP_000025458.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308781.1;locus_tag=AC00_RS20185;product=succinate--CoA ligase subunit alpha;protein_id=WP_000025458.1;transl_table=11 NZ_JJLU01000025.1 RefSeq gene 73925 74179 . - . ID=gene-AC00_RS20180;Name=AC00_RS20180;end_range=74179,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20180;old_locus_tag=AC00_0777;partial=true NZ_JJLU01000025.1 Protein Homology CDS 73925 74179 . - 0 ID=cds-WP_000474469.1-3;Parent=gene-AC00_RS20180;Dbxref=GenBank:WP_000474469.1;Name=WP_000474469.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=74179,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS20180;partial=true;product=IS1 family transposase;protein_id=WP_000474469.1;transl_table=11 ##sequence-region NZ_JJLU01000026.1 1 21307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000026.1 RefSeq region 1 21307 . + . ID=NZ_JJLU01000026.1:1..21307;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000026.1 RefSeq gene 1 236 . - . ID=gene-AC00_RS0123940;Name=AC00_RS0123940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123940;old_locus_tag=AC00_0778;partial=true;start_range=.,1 NZ_JJLU01000026.1 Protein Homology CDS 1 236 . - 0 ID=cds-WP_000179207.1;Parent=gene-AC00_RS0123940;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0123940;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;start_range=.,1;transl_table=11 NZ_JJLU01000026.1 RefSeq pseudogene 293 418 . - . ID=gene-AC00_RS26585;Name=AC00_RS26585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS26585;old_locus_tag=AC00_0779;partial=true;pseudo=true;start_range=.,293 NZ_JJLU01000026.1 Protein Homology CDS 293 418 . - 0 ID=cds-AC00_RS26585;Parent=gene-AC00_RS26585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308786.1;locus_tag=AC00_RS26585;partial=true;product=DUF4387 family protein;pseudo=true;start_range=.,293;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 415 1785 . - . ID=gene-AC00_RS20175;Name=AC00_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20175;old_locus_tag=AC00_0780 NZ_JJLU01000026.1 Protein Homology CDS 415 1785 . - 0 ID=cds-WP_032280530.1;Parent=gene-AC00_RS20175;Dbxref=GenBank:WP_032280530.1;Name=WP_032280530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308787.1;locus_tag=AC00_RS20175;product=acyclic terpene utilization AtuA family protein;protein_id=WP_032280530.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 1789 3030 . - . ID=gene-AC00_RS20170;Name=AC00_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20170;old_locus_tag=AC00_0781 NZ_JJLU01000026.1 Protein Homology CDS 1789 3030 . - 0 ID=cds-WP_000695019.1;Parent=gene-AC00_RS20170;Dbxref=GenBank:WP_000695019.1;Name=WP_000695019.1;Ontology_term=GO:0019670,GO:0050096;gbkey=CDS;go_function=methylaspartate ammonia-lyase activity|0050096||IEA;go_process=anaerobic glutamate catabolic process|0019670||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308788.1;locus_tag=AC00_RS20170;product=methylaspartate ammonia-lyase;protein_id=WP_000695019.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 3030 4475 . - . ID=gene-AC00_RS20165;Name=AC00_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20165;old_locus_tag=AC00_0782 NZ_JJLU01000026.1 Protein Homology CDS 3030 4475 . - 0 ID=cds-WP_032280532.1;Parent=gene-AC00_RS20165;Dbxref=GenBank:WP_032280532.1;Name=WP_032280532.1;Ontology_term=GO:0019670,GO:0050097;gbkey=CDS;go_function=methylaspartate mutase activity|0050097||IEA;go_process=anaerobic glutamate catabolic process|0019670||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308789.1;locus_tag=AC00_RS20165;product=methylaspartate mutase subunit E;protein_id=WP_032280532.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 4494 5882 . - . ID=gene-AC00_RS20160;Name=glmL;gbkey=Gene;gene=glmL;gene_biotype=protein_coding;locus_tag=AC00_RS20160;old_locus_tag=AC00_0783 NZ_JJLU01000026.1 Protein Homology CDS 4494 5882 . - 0 ID=cds-WP_001167713.1;Parent=gene-AC00_RS20160;Dbxref=GenBank:WP_001167713.1;Name=WP_001167713.1;gbkey=CDS;gene=glmL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308790.1;locus_tag=AC00_RS20160;product=methylaspartate mutase accessory protein GlmL;protein_id=WP_001167713.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 5882 6331 . - . ID=gene-AC00_RS20155;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AC00_RS20155;old_locus_tag=AC00_0784 NZ_JJLU01000026.1 Protein Homology CDS 5882 6331 . - 0 ID=cds-WP_000710390.1;Parent=gene-AC00_RS20155;Dbxref=GenBank:WP_000710390.1;Name=WP_000710390.1;Ontology_term=GO:0050097;gbkey=CDS;gene=glmS;go_function=methylaspartate mutase activity|0050097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308791.1;locus_tag=AC00_RS20155;product=methylaspartate mutase subunit S;protein_id=WP_000710390.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 6878 7300 . - . ID=gene-AC00_RS0123955;Name=AC00_RS0123955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0123955 NZ_JJLU01000026.1 Protein Homology CDS 6878 7300 . - 0 ID=cds-WP_077757357.1;Parent=gene-AC00_RS0123955;Dbxref=GenBank:WP_077757357.1;Name=WP_077757357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308793.1;locus_tag=AC00_RS0123955;product=hypothetical protein;protein_id=WP_077757357.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 7382 8326 . - . ID=gene-AC00_RS20150;Name=AC00_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS20150;old_locus_tag=AC00_0785 NZ_JJLU01000026.1 Protein Homology CDS 7382 8326 . - 0 ID=cds-WP_077757358.1;Parent=gene-AC00_RS20150;Dbxref=GenBank:WP_077757358.1;Name=WP_077757358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308794.1;locus_tag=AC00_RS20150;product=hypothetical protein;protein_id=WP_077757358.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 9132 10700 . + . ID=gene-AC00_RS20145;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=AC00_RS20145;old_locus_tag=AC00_0786 NZ_JJLU01000026.1 Protein Homology CDS 9132 10700 . + 0 ID=cds-WP_000884361.1;Parent=gene-AC00_RS20145;Dbxref=GenBank:WP_000884361.1;Name=WP_000884361.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415261.2;locus_tag=AC00_RS20145;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_000884361.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 10716 11855 . + . ID=gene-AC00_RS20140;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=AC00_RS20140;old_locus_tag=AC00_0787 NZ_JJLU01000026.1 Protein Homology CDS 10716 11855 . + 0 ID=cds-WP_000568275.1;Parent=gene-AC00_RS20140;Dbxref=GenBank:WP_000568275.1;Name=WP_000568275.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=AC00_RS20140;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000568275.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 11870 11983 . + . ID=gene-AC00_RS20135;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=AC00_RS20135;old_locus_tag=AC00_0788 NZ_JJLU01000026.1 Protein Homology CDS 11870 11983 . + 0 ID=cds-WP_000270282.1;Parent=gene-AC00_RS20135;Dbxref=GenBank:WP_000270282.1;Name=WP_000270282.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588444.1;locus_tag=AC00_RS20135;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_000270282.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 11983 12276 . + . ID=gene-AC00_RS0123960;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=AC00_RS0123960;old_locus_tag=AC00_0789 NZ_JJLU01000026.1 Protein Homology CDS 11983 12276 . + 0 ID=cds-WP_000034602.1;Parent=gene-AC00_RS0123960;Dbxref=GenBank:WP_000034602.1;Name=WP_000034602.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308797.1;locus_tag=AC00_RS0123960;product=cyd operon protein YbgE;protein_id=WP_000034602.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 12426 12830 . + . ID=gene-AC00_RS20130;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=AC00_RS20130;old_locus_tag=AC00_0790 NZ_JJLU01000026.1 Protein Homology CDS 12426 12830 . + 0 ID=cds-WP_001098384.1;Parent=gene-AC00_RS20130;Dbxref=GenBank:WP_001098384.1;Name=WP_001098384.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=AC00_RS20130;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_001098384.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 12827 13519 . + . ID=gene-AC00_RS20125;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AC00_RS20125;old_locus_tag=AC00_0791 NZ_JJLU01000026.1 Protein Homology CDS 12827 13519 . + 0 ID=cds-WP_000131314.1;Parent=gene-AC00_RS20125;Dbxref=GenBank:WP_000131314.1;Name=WP_000131314.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=AC00_RS20125;product=Tol-Pal system protein TolQ;protein_id=WP_000131314.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 13523 13951 . + . ID=gene-AC00_RS20120;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AC00_RS20120;old_locus_tag=AC00_0792 NZ_JJLU01000026.1 Protein Homology CDS 13523 13951 . + 0 ID=cds-WP_000090097.1;Parent=gene-AC00_RS20120;Dbxref=GenBank:WP_000090097.1;Name=WP_000090097.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=AC00_RS20120;product=colicin uptake protein TolR;protein_id=WP_000090097.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 14016 15296 . + . ID=gene-AC00_RS20115;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AC00_RS20115;old_locus_tag=AC00_0793 NZ_JJLU01000026.1 Protein Homology CDS 14016 15296 . + 0 ID=cds-WP_032280536.1;Parent=gene-AC00_RS20115;Dbxref=GenBank:WP_032280536.1;Name=WP_032280536.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415267.1;locus_tag=AC00_RS20115;product=cell envelope integrity protein TolA;protein_id=WP_032280536.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 15429 16721 . + . ID=gene-AC00_RS20110;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=AC00_RS20110;old_locus_tag=AC00_0794 NZ_JJLU01000026.1 Protein Homology CDS 15429 16721 . + 0 ID=cds-WP_001295307.1;Parent=gene-AC00_RS20110;Dbxref=GenBank:WP_001295307.1;Name=WP_001295307.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=AC00_RS20110;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_001295307.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 16756 17277 . + . ID=gene-AC00_RS20105;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=AC00_RS20105;old_locus_tag=AC00_0795 NZ_JJLU01000026.1 Protein Homology CDS 16756 17277 . + 0 ID=cds-WP_001295306.1;Parent=gene-AC00_RS20105;Dbxref=GenBank:WP_001295306.1;Name=WP_001295306.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308803.1;locus_tag=AC00_RS20105;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_001295306.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 17287 18078 . + . ID=gene-AC00_RS20100;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=AC00_RS20100;old_locus_tag=AC00_0796 NZ_JJLU01000026.1 Protein Homology CDS 17287 18078 . + 0 ID=cds-WP_000097569.1;Parent=gene-AC00_RS20100;Dbxref=GenBank:WP_000097569.1;Name=WP_000097569.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308804.1;locus_tag=AC00_RS20100;product=cell division protein CpoB;protein_id=WP_000097569.1;transl_table=11 NZ_JJLU01000026.1 RefSeq gene 18243 18318 . + . ID=gene-AC00_RS20095;Name=AC00_RS20095;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20095;old_locus_tag=AC00_0797 NZ_JJLU01000026.1 tRNAscan-SE tRNA 18243 18318 . + . ID=rna-AC00_RS20095;Parent=gene-AC00_RS20095;anticodon=(pos:18276..18278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20095;product=tRNA-Lys NZ_JJLU01000026.1 tRNAscan-SE exon 18243 18318 . + . ID=exon-AC00_RS20095-1;Parent=rna-AC00_RS20095;anticodon=(pos:18276..18278);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20095;product=tRNA-Lys NZ_JJLU01000026.1 RefSeq gene 18354 18429 . + . ID=gene-AC00_RS20090;Name=AC00_RS20090;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20090;old_locus_tag=AC00_0798 NZ_JJLU01000026.1 tRNAscan-SE tRNA 18354 18429 . + . ID=rna-AC00_RS20090;Parent=gene-AC00_RS20090;anticodon=(pos:18387..18389);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20090;product=tRNA-Val NZ_JJLU01000026.1 tRNAscan-SE exon 18354 18429 . + . ID=exon-AC00_RS20090-1;Parent=rna-AC00_RS20090;anticodon=(pos:18387..18389);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20090;product=tRNA-Val NZ_JJLU01000026.1 RefSeq gene 18432 18507 . + . ID=gene-AC00_RS20085;Name=AC00_RS20085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20085;old_locus_tag=AC00_0799 NZ_JJLU01000026.1 tRNAscan-SE tRNA 18432 18507 . + . ID=rna-AC00_RS20085;Parent=gene-AC00_RS20085;anticodon=(pos:18465..18467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20085;product=tRNA-Lys NZ_JJLU01000026.1 tRNAscan-SE exon 18432 18507 . + . ID=exon-AC00_RS20085-1;Parent=rna-AC00_RS20085;anticodon=(pos:18465..18467);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20085;product=tRNA-Lys NZ_JJLU01000026.1 RefSeq gene 18559 18634 . + . ID=gene-AC00_RS20080;Name=AC00_RS20080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20080;old_locus_tag=AC00_0800 NZ_JJLU01000026.1 tRNAscan-SE tRNA 18559 18634 . + . ID=rna-AC00_RS20080;Parent=gene-AC00_RS20080;anticodon=(pos:18592..18594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20080;product=tRNA-Val NZ_JJLU01000026.1 tRNAscan-SE exon 18559 18634 . + . ID=exon-AC00_RS20080-1;Parent=rna-AC00_RS20080;anticodon=(pos:18592..18594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20080;product=tRNA-Val NZ_JJLU01000026.1 RefSeq gene 18638 18713 . + . ID=gene-AC00_RS20075;Name=AC00_RS20075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20075;old_locus_tag=AC00_0801 NZ_JJLU01000026.1 tRNAscan-SE tRNA 18638 18713 . + . ID=rna-AC00_RS20075;Parent=gene-AC00_RS20075;anticodon=(pos:18671..18673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20075;product=tRNA-Lys NZ_JJLU01000026.1 tRNAscan-SE exon 18638 18713 . + . ID=exon-AC00_RS20075-1;Parent=rna-AC00_RS20075;anticodon=(pos:18671..18673);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20075;product=tRNA-Lys NZ_JJLU01000026.1 RefSeq gene 18860 18935 . + . ID=gene-AC00_RS20070;Name=AC00_RS20070;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20070;old_locus_tag=AC00_0802 NZ_JJLU01000026.1 tRNAscan-SE tRNA 18860 18935 . + . ID=rna-AC00_RS20070;Parent=gene-AC00_RS20070;anticodon=(pos:18893..18895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20070;product=tRNA-Lys NZ_JJLU01000026.1 tRNAscan-SE exon 18860 18935 . + . ID=exon-AC00_RS20070-1;Parent=rna-AC00_RS20070;anticodon=(pos:18893..18895);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20070;product=tRNA-Lys NZ_JJLU01000026.1 RefSeq gene 19082 19157 . + . ID=gene-AC00_RS20065;Name=AC00_RS20065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20065;old_locus_tag=AC00_0803 NZ_JJLU01000026.1 tRNAscan-SE tRNA 19082 19157 . + . ID=rna-AC00_RS20065;Parent=gene-AC00_RS20065;anticodon=(pos:19115..19117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20065;product=tRNA-Lys NZ_JJLU01000026.1 tRNAscan-SE exon 19082 19157 . + . ID=exon-AC00_RS20065-1;Parent=rna-AC00_RS20065;anticodon=(pos:19115..19117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20065;product=tRNA-Lys NZ_JJLU01000026.1 RefSeq gene 19191 19266 . + . ID=gene-AC00_RS20060;Name=AC00_RS20060;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS20060;old_locus_tag=AC00_0804 NZ_JJLU01000026.1 tRNAscan-SE tRNA 19191 19266 . + . ID=rna-AC00_RS20060;Parent=gene-AC00_RS20060;anticodon=(pos:19224..19226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20060;product=tRNA-Lys NZ_JJLU01000026.1 tRNAscan-SE exon 19191 19266 . + . ID=exon-AC00_RS20060-1;Parent=rna-AC00_RS20060;anticodon=(pos:19224..19226);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS20060;product=tRNA-Lys NZ_JJLU01000026.1 RefSeq gene 19297 19422 . + . ID=gene-AC00_RS26740;Name=AC00_RS26740;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC00_RS26740 NZ_JJLU01000026.1 cmsearch ncRNA 19297 19422 . + . ID=rna-AC00_RS26740;Parent=gene-AC00_RS26740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26740;product=RtT sRNA NZ_JJLU01000026.1 cmsearch exon 19297 19422 . + . ID=exon-AC00_RS26740-1;Parent=rna-AC00_RS26740;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26740;product=RtT sRNA NZ_JJLU01000026.1 RefSeq gene 19453 19578 . + . ID=gene-AC00_RS26745;Name=AC00_RS26745;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC00_RS26745 NZ_JJLU01000026.1 cmsearch ncRNA 19453 19578 . + . ID=rna-AC00_RS26745;Parent=gene-AC00_RS26745;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26745;product=RtT sRNA NZ_JJLU01000026.1 cmsearch exon 19453 19578 . + . ID=exon-AC00_RS26745-1;Parent=rna-AC00_RS26745;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26745;product=RtT sRNA NZ_JJLU01000026.1 RefSeq gene 19609 19734 . + . ID=gene-AC00_RS26750;Name=AC00_RS26750;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC00_RS26750 NZ_JJLU01000026.1 cmsearch ncRNA 19609 19734 . + . ID=rna-AC00_RS26750;Parent=gene-AC00_RS26750;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26750;product=RtT sRNA NZ_JJLU01000026.1 cmsearch exon 19609 19734 . + . ID=exon-AC00_RS26750-1;Parent=rna-AC00_RS26750;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26750;product=RtT sRNA NZ_JJLU01000026.1 RefSeq gene 20012 21055 . + . ID=gene-AC00_RS20055;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AC00_RS20055;old_locus_tag=AC00_0805 NZ_JJLU01000026.1 Protein Homology CDS 20012 21055 . + 0 ID=cds-WP_032280537.1;Parent=gene-AC00_RS20055;Dbxref=GenBank:WP_032280537.1;Name=WP_032280537.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AC00_RS20055;product=quinolinate synthase NadA;protein_id=WP_032280537.1;transl_table=11 NZ_JJLU01000026.1 RefSeq pseudogene 21093 21307 . + . ID=gene-AC00_RS20050;Name=pnuC;end_range=21307,.;gbkey=Gene;gene=pnuC;gene_biotype=pseudogene;locus_tag=AC00_RS20050;old_locus_tag=AC00_0806;partial=true;pseudo=true NZ_JJLU01000026.1 Protein Homology CDS 21093 21307 . + 0 ID=cds-AC00_RS20050;Parent=gene-AC00_RS20050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=21307,.;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308806.1;locus_tag=AC00_RS20050;partial=true;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000027.1 1 20789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000027.1 RefSeq region 1 20789 . + . ID=NZ_JJLU01000027.1:1..20789;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000027.1 RefSeq gene 291 1334 . + . ID=gene-AC00_RS20045;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AC00_RS20045;old_locus_tag=AC00_0807 NZ_JJLU01000027.1 Protein Homology CDS 291 1334 . + 0 ID=cds-WP_032280537.1-2;Parent=gene-AC00_RS20045;Dbxref=GenBank:WP_032280537.1;Name=WP_032280537.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415271.1;locus_tag=AC00_RS20045;product=quinolinate synthase NadA;protein_id=WP_032280537.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 1372 2091 . + . ID=gene-AC00_RS20040;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AC00_RS20040;old_locus_tag=AC00_0808 NZ_JJLU01000027.1 Protein Homology CDS 1372 2091 . + 0 ID=cds-WP_000345417.1;Parent=gene-AC00_RS20040;Dbxref=GenBank:WP_000345417.1;Name=WP_000345417.1;gbkey=CDS;gene=pnuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308806.1;locus_tag=AC00_RS20040;product=nicotinamide riboside transporter PnuC;protein_id=WP_000345417.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 2088 3029 . - . ID=gene-AC00_RS20035;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=AC00_RS20035;old_locus_tag=AC00_0809 NZ_JJLU01000027.1 Protein Homology CDS 2088 3029 . - 0 ID=cds-WP_000951292.1;Parent=gene-AC00_RS20035;Dbxref=GenBank:WP_000951292.1;Name=WP_000951292.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415273.1;locus_tag=AC00_RS20035;product=CDF family zinc transporter ZitB;protein_id=WP_000951292.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 3143 3523 . - . ID=gene-AC00_RS20030;Name=ybgS;gbkey=Gene;gene=ybgS;gene_biotype=protein_coding;locus_tag=AC00_RS20030;old_locus_tag=AC00_0810 NZ_JJLU01000027.1 Protein Homology CDS 3143 3523 . - 0 ID=cds-WP_032280538.1;Parent=gene-AC00_RS20030;Dbxref=GenBank:WP_032280538.1;Name=WP_032280538.1;gbkey=CDS;gene=ybgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308808.1;locus_tag=AC00_RS20030;product=YbgS-like family protein;protein_id=WP_032280538.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 3839 4891 . + . ID=gene-AC00_RS20025;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=AC00_RS20025;old_locus_tag=AC00_0811 NZ_JJLU01000027.1 Protein Homology CDS 3839 4891 . + 0 ID=cds-WP_032280540.1;Parent=gene-AC00_RS20025;Dbxref=GenBank:WP_032280540.1;Name=WP_032280540.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=AC00_RS20025;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_032280540.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 5039 5791 . - . ID=gene-AC00_RS20020;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AC00_RS20020;old_locus_tag=AC00_0812 NZ_JJLU01000027.1 Protein Homology CDS 5039 5791 . - 0 ID=cds-WP_001295305.1;Parent=gene-AC00_RS20020;Dbxref=GenBank:WP_001295305.1;Name=WP_001295305.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=AC00_RS20020;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001295305.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 5993 7033 . - . ID=gene-AC00_RS20015;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AC00_RS20015;old_locus_tag=AC00_0814 NZ_JJLU01000027.1 Protein Homology CDS 5993 7033 . - 0 ID=cds-WP_000931389.1;Parent=gene-AC00_RS20015;Dbxref=GenBank:WP_000931389.1;Name=WP_000931389.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415277.1;locus_tag=AC00_RS20015;product=galactose-1-epimerase;protein_id=WP_000931389.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 7027 8175 . - . ID=gene-AC00_RS20010;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=AC00_RS20010;old_locus_tag=AC00_0815 NZ_JJLU01000027.1 Protein Homology CDS 7027 8175 . - 0 ID=cds-WP_000053415.1;Parent=gene-AC00_RS20010;Dbxref=GenBank:WP_000053415.1;Name=WP_000053415.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=AC00_RS20010;product=galactokinase;protein_id=WP_000053415.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 8179 9225 . - . ID=gene-AC00_RS20005;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=AC00_RS20005;old_locus_tag=AC00_0816 NZ_JJLU01000027.1 Protein Homology CDS 8179 9225 . - 0 ID=cds-WP_032280541.1;Parent=gene-AC00_RS20005;Dbxref=GenBank:WP_032280541.1;Name=WP_032280541.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308813.1;locus_tag=AC00_RS20005;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_032280541.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 9235 10251 . - . ID=gene-AC00_RS20000;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AC00_RS20000;old_locus_tag=AC00_0817 NZ_JJLU01000027.1 Protein Homology CDS 9235 10251 . - 0 ID=cds-WP_001265443.1;Parent=gene-AC00_RS20000;Dbxref=GenBank:WP_001265443.1;Name=WP_001265443.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308814.3;locus_tag=AC00_RS20000;product=UDP-glucose 4-epimerase GalE;protein_id=WP_001265443.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 10513 11985 . - . ID=gene-AC00_RS19995;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=AC00_RS19995;old_locus_tag=AC00_0818 NZ_JJLU01000027.1 Protein Homology CDS 10513 11985 . - 0 ID=cds-WP_032280542.1;Parent=gene-AC00_RS19995;Dbxref=GenBank:WP_032280542.1;Name=WP_032280542.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415281.1;locus_tag=AC00_RS19995;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_032280542.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 12053 12841 . - . ID=gene-AC00_RS19990;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=AC00_RS19990;old_locus_tag=AC00_0819 NZ_JJLU01000027.1 Protein Homology CDS 12053 12841 . - 0 ID=cds-WP_001147439.1;Parent=gene-AC00_RS19990;Dbxref=GenBank:WP_001147439.1;Name=WP_001147439.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=AC00_RS19990;product=molybdenum-dependent transcriptional regulator;protein_id=WP_001147439.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 12970 13119 . + . ID=gene-AC00_RS19985;Name=acrZ;gbkey=Gene;gene=acrZ;gene_biotype=protein_coding;locus_tag=AC00_RS19985;old_locus_tag=AC00_0820 NZ_JJLU01000027.1 Protein Homology CDS 12970 13119 . + 0 ID=cds-WP_000891515.1;Parent=gene-AC00_RS19985;Dbxref=GenBank:WP_000891515.1;Name=WP_000891515.1;gbkey=CDS;gene=acrZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308817.1;locus_tag=AC00_RS19985;product=multidrug efflux pump accessory protein AcrZ;protein_id=WP_000891515.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 13286 14059 . + . ID=gene-AC00_RS19980;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=AC00_RS19980;old_locus_tag=AC00_0821 NZ_JJLU01000027.1 Protein Homology CDS 13286 14059 . + 0 ID=cds-WP_000101990.1;Parent=gene-AC00_RS19980;Dbxref=GenBank:WP_000101990.1;Name=WP_000101990.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308818.1;locus_tag=AC00_RS19980;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_000101990.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 14059 14748 . + . ID=gene-AC00_RS19975;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=AC00_RS19975;old_locus_tag=AC00_0822 NZ_JJLU01000027.1 Protein Homology CDS 14059 14748 . + 0 ID=cds-WP_032280545.1;Parent=gene-AC00_RS19975;Dbxref=GenBank:WP_032280545.1;Name=WP_032280545.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308819.1;locus_tag=AC00_RS19975;product=molybdate ABC transporter permease subunit;protein_id=WP_032280545.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 14751 15809 . + . ID=gene-AC00_RS19970;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=AC00_RS19970;old_locus_tag=AC00_0823 NZ_JJLU01000027.1 Protein Homology CDS 14751 15809 . + 0 ID=cds-WP_000891683.1;Parent=gene-AC00_RS19970;Dbxref=GenBank:WP_000891683.1;Name=WP_000891683.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308820.1;locus_tag=AC00_RS19970;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_000891683.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 15810 16628 . - . ID=gene-AC00_RS19965;Name=ybhA;gbkey=Gene;gene=ybhA;gene_biotype=protein_coding;locus_tag=AC00_RS19965;old_locus_tag=AC00_0824 NZ_JJLU01000027.1 Protein Homology CDS 15810 16628 . - 0 ID=cds-WP_000213425.1;Parent=gene-AC00_RS19965;Dbxref=GenBank:WP_000213425.1;Name=WP_000213425.1;gbkey=CDS;gene=ybhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308821.1;locus_tag=AC00_RS19965;product=bifunctional pyridoxal phosphate/fructose-1%2C6-bisphosphate phosphatase;protein_id=WP_000213425.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 16783 17778 . + . ID=gene-AC00_RS19960;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=AC00_RS19960;old_locus_tag=AC00_0825 NZ_JJLU01000027.1 Protein Homology CDS 16783 17778 . + 0 ID=cds-WP_000815433.1;Parent=gene-AC00_RS19960;Dbxref=GenBank:WP_000815433.1;Name=WP_000815433.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308822.1;locus_tag=AC00_RS19960;product=6-phosphogluconolactonase;protein_id=WP_000815433.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 17819 18772 . - . ID=gene-AC00_RS19955;Name=ybhD;gbkey=Gene;gene=ybhD;gene_biotype=protein_coding;locus_tag=AC00_RS19955;old_locus_tag=AC00_0826 NZ_JJLU01000027.1 Protein Homology CDS 17819 18772 . - 0 ID=cds-WP_001312682.1;Parent=gene-AC00_RS19955;Dbxref=GenBank:WP_001312682.1;Name=WP_001312682.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;gene=ybhD;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308823.3;locus_tag=AC00_RS19955;product=LysR family transcriptional regulator;protein_id=WP_001312682.1;transl_table=11 NZ_JJLU01000027.1 RefSeq gene 18956 20008 . + . ID=gene-AC00_RS19950;Name=ybhH;gbkey=Gene;gene=ybhH;gene_biotype=protein_coding;locus_tag=AC00_RS19950;old_locus_tag=AC00_0828 NZ_JJLU01000027.1 Protein Homology CDS 18956 20008 . + 0 ID=cds-WP_032280548.1;Parent=gene-AC00_RS19950;Dbxref=GenBank:WP_032280548.1;Name=WP_032280548.1;gbkey=CDS;gene=ybhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415290.1;locus_tag=AC00_RS19950;product=4-oxalomesaconate tautomerase;protein_id=WP_032280548.1;transl_table=11 NZ_JJLU01000027.1 RefSeq pseudogene 20084 20170 . + . ID=gene-AC00_RS31130;Name=AC00_RS31130;end_range=20170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31130;partial=true;pseudo=true NZ_JJLU01000027.1 Protein Homology CDS 20084 20170 . + 0 ID=cds-AC00_RS31130;Parent=gene-AC00_RS31130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308825.1;locus_tag=AC00_RS31130;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000027.1 RefSeq pseudogene 20227 20789 . + . ID=gene-AC00_RS19945;Name=AC00_RS19945;end_range=20789,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19945;old_locus_tag=AC00_0829;partial=true;pseudo=true NZ_JJLU01000027.1 Protein Homology CDS 20227 20789 . + 0 ID=cds-AC00_RS19945;Parent=gene-AC00_RS19945;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=20789,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS19945;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000028.1 1 31936 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000028.1 RefSeq region 1 31936 . + . ID=NZ_JJLU01000028.1:1..31936;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000028.1 RefSeq gene 1 260 . + . ID=gene-AC00_RS19940;Name=AC00_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19940;old_locus_tag=AC00_0830;partial=true;start_range=.,1 NZ_JJLU01000028.1 Protein Homology CDS 1 260 . + 2 ID=cds-WP_001510179.1;Parent=gene-AC00_RS19940;Dbxref=GenBank:WP_001510179.1;Name=WP_001510179.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS19940;partial=true;product=IS1 family transposase;protein_id=WP_001510179.1;start_range=.,1;transl_table=11 NZ_JJLU01000028.1 RefSeq pseudogene 278 1630 . + . ID=gene-AC00_RS19935;Name=ybhI;gbkey=Gene;gene=ybhI;gene_biotype=pseudogene;locus_tag=AC00_RS19935;old_locus_tag=AC00_0831;partial=true;pseudo=true;start_range=.,278 NZ_JJLU01000028.1 Protein Homology CDS 278 1630 . + 0 ID=cds-AC00_RS19935;Parent=gene-AC00_RS19935;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;gene=ybhI;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415291.1;locus_tag=AC00_RS19935;partial=true;product=anion permease;pseudo=true;start_range=.,278;transl_table=11 NZ_JJLU01000028.1 RefSeq pseudogene 1813 4070 . + . ID=gene-AC00_RS19930;Name=ybhJ;gbkey=Gene;gene=ybhJ;gene_biotype=pseudogene;locus_tag=AC00_RS19930;old_locus_tag=AC00_0833;pseudo=true NZ_JJLU01000028.1 Protein Homology CDS 1813 4070 . + 0 ID=cds-AC00_RS19930;Parent=gene-AC00_RS19930;Note=frameshifted;gbkey=CDS;gene=ybhJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706815.2;locus_tag=AC00_RS19930;product=hydratase;pseudo=true;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 4211 5494 . - . ID=gene-AC00_RS19925;Name=ybhC;gbkey=Gene;gene=ybhC;gene_biotype=protein_coding;locus_tag=AC00_RS19925;old_locus_tag=AC00_0834 NZ_JJLU01000028.1 Protein Homology CDS 4211 5494 . - 0 ID=cds-WP_001091578.1;Parent=gene-AC00_RS19925;Dbxref=GenBank:WP_001091578.1;Name=WP_001091578.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;gene=ybhC;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308827.1;locus_tag=AC00_RS19925;product=putative acyl-CoA thioester hydrolase;protein_id=WP_001091578.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 5646 6122 . - . ID=gene-AC00_RS19920;Name=ybhB;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=AC00_RS19920;old_locus_tag=AC00_0835 NZ_JJLU01000028.1 Protein Homology CDS 5646 6122 . - 0 ID=cds-WP_032280553.1;Parent=gene-AC00_RS19920;Dbxref=GenBank:WP_032280553.1;Name=WP_032280553.1;gbkey=CDS;gene=ybhB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308878.1;locus_tag=AC00_RS19920;product=kinase inhibitor;protein_id=WP_032280553.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 6181 7470 . - . ID=gene-AC00_RS19915;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AC00_RS19915;old_locus_tag=AC00_0836 NZ_JJLU01000028.1 Protein Homology CDS 6181 7470 . - 0 ID=cds-WP_071826924.1;Parent=gene-AC00_RS19915;Dbxref=GenBank:WP_071826924.1;Name=WP_071826924.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308879.1;locus_tag=AC00_RS19915;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_071826924.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 7557 8597 . + . ID=gene-AC00_RS19910;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AC00_RS19910;old_locus_tag=AC00_0837 NZ_JJLU01000028.1 Protein Homology CDS 7557 8597 . + 0 ID=cds-WP_032280554.1;Parent=gene-AC00_RS19910;Dbxref=GenBank:WP_032280554.1;Name=WP_032280554.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=AC00_RS19910;product=biotin synthase BioB;protein_id=WP_032280554.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 8594 9748 . + . ID=gene-AC00_RS19905;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=AC00_RS19905;old_locus_tag=AC00_0838 NZ_JJLU01000028.1 Protein Homology CDS 8594 9748 . + 0 ID=cds-WP_032288174.1;Parent=gene-AC00_RS19905;Dbxref=GenBank:WP_032288174.1;Name=WP_032288174.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308881.1;locus_tag=AC00_RS19905;product=8-amino-7-oxononanoate synthase;protein_id=WP_032288174.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 9735 10490 . + . ID=gene-AC00_RS19900;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=AC00_RS19900;old_locus_tag=AC00_0839 NZ_JJLU01000028.1 Protein Homology CDS 9735 10490 . + 0 ID=cds-WP_032280556.1;Parent=gene-AC00_RS19900;Dbxref=GenBank:WP_032280556.1;Name=WP_032280556.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308882.1;locus_tag=AC00_RS19900;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_032280556.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 10483 11160 . + . ID=gene-AC00_RS19895;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AC00_RS19895;old_locus_tag=AC00_0840 NZ_JJLU01000028.1 Protein Homology CDS 10483 11160 . + 0 ID=cds-WP_032280557.1;Parent=gene-AC00_RS19895;Dbxref=GenBank:WP_032280557.1;Name=WP_032280557.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308883.1;locus_tag=AC00_RS19895;product=dethiobiotin synthase;protein_id=WP_032280557.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 11739 13760 . + . ID=gene-AC00_RS19890;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AC00_RS19890;old_locus_tag=AC00_0841 NZ_JJLU01000028.1 Protein Homology CDS 11739 13760 . + 0 ID=cds-WP_000042533.1;Parent=gene-AC00_RS19890;Dbxref=GenBank:WP_000042533.1;Name=WP_000042533.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=AC00_RS19890;product=excinuclease ABC subunit UvrB;protein_id=WP_000042533.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 13951 14859 . - . ID=gene-AC00_RS19885;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=AC00_RS19885;old_locus_tag=AC00_0842 NZ_JJLU01000028.1 Protein Homology CDS 13951 14859 . - 0 ID=cds-WP_025210319.1;Parent=gene-AC00_RS19885;Dbxref=GenBank:WP_025210319.1;Name=WP_025210319.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308885.1;locus_tag=AC00_RS19885;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_025210319.1;transl_table=11 NZ_JJLU01000028.1 cmsearch riboswitch 15124 15268 . + . ID=id-NZ_JJLU01000028.1:15124..15268;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLU01000028.1 RefSeq gene 15256 16245 . + . ID=gene-AC00_RS19880;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AC00_RS19880;old_locus_tag=AC00_0843 NZ_JJLU01000028.1 Protein Homology CDS 15256 16245 . + 0 ID=cds-WP_001295301.1;Parent=gene-AC00_RS19880;Dbxref=GenBank:WP_001295301.1;Name=WP_001295301.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308886.1;locus_tag=AC00_RS19880;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_001295301.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 16267 16779 . + . ID=gene-AC00_RS19875;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=AC00_RS19875;old_locus_tag=AC00_0844 NZ_JJLU01000028.1 Protein Homology CDS 16267 16779 . + 0 ID=cds-WP_000084639.1;Parent=gene-AC00_RS19875;Dbxref=GenBank:WP_000084639.1;Name=WP_000084639.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=AC00_RS19875;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_000084639.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 16782 17267 . + . ID=gene-AC00_RS19870;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AC00_RS19870;old_locus_tag=AC00_0845 NZ_JJLU01000028.1 Protein Homology CDS 16782 17267 . + 0 ID=cds-WP_000080885.1;Parent=gene-AC00_RS19870;Dbxref=GenBank:WP_000080885.1;Name=WP_000080885.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=AC00_RS19870;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_000080885.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 17260 17505 . + . ID=gene-AC00_RS19865;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=AC00_RS19865;old_locus_tag=AC00_0846 NZ_JJLU01000028.1 Protein Homology CDS 17260 17505 . + 0 ID=cds-WP_000598612.1;Parent=gene-AC00_RS19865;Dbxref=GenBank:WP_000598612.1;Name=WP_000598612.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=AC00_RS19865;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_000598612.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 17507 17959 . + . ID=gene-AC00_RS19860;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AC00_RS19860;old_locus_tag=AC00_0847 NZ_JJLU01000028.1 Protein Homology CDS 17507 17959 . + 0 ID=cds-WP_000852287.1;Parent=gene-AC00_RS19860;Dbxref=GenBank:WP_000852287.1;Name=WP_000852287.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415306.1;locus_tag=AC00_RS19860;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_000852287.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 18096 18800 . + . ID=gene-AC00_RS19855;Name=ybhL;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=AC00_RS19855;old_locus_tag=AC00_0848 NZ_JJLU01000028.1 Protein Homology CDS 18096 18800 . + 0 ID=cds-WP_032280558.1;Parent=gene-AC00_RS19855;Dbxref=GenBank:WP_032280558.1;Name=WP_032280558.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415307.1;locus_tag=AC00_RS19855;product=Bax inhibitor-1/YccA family protein;protein_id=WP_032280558.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 19004 19717 . + . ID=gene-AC00_RS19850;Name=ybhM;gbkey=Gene;gene=ybhM;gene_biotype=protein_coding;locus_tag=AC00_RS19850;old_locus_tag=AC00_0849 NZ_JJLU01000028.1 Protein Homology CDS 19004 19717 . + 0 ID=cds-WP_032280559.1;Parent=gene-AC00_RS19850;Dbxref=GenBank:WP_032280559.1;Name=WP_032280559.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ybhM;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308892.1;locus_tag=AC00_RS19850;product=Bax inhibitor-1/YccA family protein;protein_id=WP_032280559.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 19753 20709 . - . ID=gene-AC00_RS19845;Name=ybhN;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=AC00_RS19845;old_locus_tag=AC00_0850 NZ_JJLU01000028.1 Protein Homology CDS 19753 20709 . - 0 ID=cds-WP_000045450.1;Parent=gene-AC00_RS19845;Dbxref=GenBank:WP_000045450.1;Name=WP_000045450.1;gbkey=CDS;gene=ybhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415309.1;locus_tag=AC00_RS19845;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_000045450.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 20709 21950 . - . ID=gene-AC00_RS19840;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=AC00_RS19840;old_locus_tag=AC00_0851 NZ_JJLU01000028.1 Protein Homology CDS 20709 21950 . - 0 ID=cds-WP_000650337.1;Parent=gene-AC00_RS19840;Dbxref=GenBank:WP_000650337.1;Name=WP_000650337.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308894.1;locus_tag=AC00_RS19840;product=cardiolipin synthase ClsB;protein_id=WP_000650337.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 21947 22708 . - . ID=gene-AC00_RS19835;Name=ybhP;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=AC00_RS19835;old_locus_tag=AC00_0852 NZ_JJLU01000028.1 Protein Homology CDS 21947 22708 . - 0 ID=cds-WP_001113348.1;Parent=gene-AC00_RS19835;Dbxref=GenBank:WP_001113348.1;Name=WP_001113348.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ybhP;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=AC00_RS19835;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_001113348.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 22841 23251 . + . ID=gene-AC00_RS19830;Name=ybhQ;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=AC00_RS19830;old_locus_tag=AC00_0853 NZ_JJLU01000028.1 Protein Homology CDS 22841 23251 . + 0 ID=cds-WP_000871982.1;Parent=gene-AC00_RS19830;Dbxref=GenBank:WP_000871982.1;Name=WP_000871982.1;gbkey=CDS;gene=ybhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308896.1;locus_tag=AC00_RS19830;product=YbhQ family protein;protein_id=WP_000871982.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 23213 24319 . - . ID=gene-AC00_RS19825;Name=ybhR;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=AC00_RS19825;old_locus_tag=AC00_0854 NZ_JJLU01000028.1 Protein Homology CDS 23213 24319 . - 0 ID=cds-WP_032280560.1;Parent=gene-AC00_RS19825;Dbxref=GenBank:WP_032280560.1;Name=WP_032280560.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=ybhR;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308897.1;locus_tag=AC00_RS19825;product=ABC transporter permease;protein_id=WP_032280560.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 24330 25463 . - . ID=gene-AC00_RS19820;Name=ybhS;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=AC00_RS19820;old_locus_tag=AC00_0855 NZ_JJLU01000028.1 Protein Homology CDS 24330 25463 . - 0 ID=cds-WP_021556617.1;Parent=gene-AC00_RS19820;Dbxref=GenBank:WP_021556617.1;Name=WP_021556617.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=ybhS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308898.1;locus_tag=AC00_RS19820;product=ABC transporter permease;protein_id=WP_021556617.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 25456 27192 . - . ID=gene-AC00_RS19815;Name=ybhF;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=AC00_RS19815;old_locus_tag=AC00_0856 NZ_JJLU01000028.1 Protein Homology CDS 25456 27192 . - 0 ID=cds-WP_032280561.1;Parent=gene-AC00_RS19815;Dbxref=GenBank:WP_032280561.1;Name=WP_032280561.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ybhF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308899.2;locus_tag=AC00_RS19815;product=ATP-binding cassette domain-containing protein;protein_id=WP_032280561.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 27185 28180 . - . ID=gene-AC00_RS19810;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=AC00_RS19810;old_locus_tag=AC00_0857 NZ_JJLU01000028.1 Protein Homology CDS 27185 28180 . - 0 ID=cds-WP_000743444.1;Parent=gene-AC00_RS19810;Dbxref=GenBank:WP_000743444.1;Name=WP_000743444.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308900.2;locus_tag=AC00_RS19810;product=secretion protein HlyD;protein_id=WP_000743444.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 28183 28854 . - . ID=gene-AC00_RS19805;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=AC00_RS19805;old_locus_tag=AC00_0858 NZ_JJLU01000028.1 Protein Homology CDS 28183 28854 . - 0 ID=cds-WP_001296991.1;Parent=gene-AC00_RS19805;Dbxref=GenBank:WP_001296991.1;Name=WP_001296991.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415317.4;locus_tag=AC00_RS19805;product=DNA-binding transcriptional regulator CecR;protein_id=WP_001296991.1;transl_table=11 NZ_JJLU01000028.1 RefSeq gene 29083 30447 . + . ID=gene-AC00_RS19800;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=AC00_RS19800;old_locus_tag=AC00_0859 NZ_JJLU01000028.1 Protein Homology CDS 29083 30447 . + 0 ID=cds-WP_032280562.1;Parent=gene-AC00_RS19800;Dbxref=GenBank:WP_032280562.1;Name=WP_032280562.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415318.1;locus_tag=AC00_RS19800;product=ATP-dependent RNA helicase RhlE;protein_id=WP_032280562.1;transl_table=11 NZ_JJLU01000028.1 RefSeq pseudogene 31055 31615 . + . ID=gene-AC00_RS27240;Name=espX2;end_range=31615,.;gbkey=Gene;gene=espX2;gene_biotype=pseudogene;locus_tag=AC00_RS27240;old_locus_tag=AC00_0861;partial=true;pseudo=true NZ_JJLU01000028.1 Protein Homology CDS 31055 31615 . + 0 ID=cds-AC00_RS27240;Parent=gene-AC00_RS27240;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=31615,.;gbkey=CDS;gene=espX2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308903.1;locus_tag=AC00_RS27240;partial=true;product=type III secretion system effector EspX2;pseudo=true;transl_table=11 NZ_JJLU01000028.1 RefSeq pseudogene 31632 31936 . - . ID=gene-AC00_RS19790;Name=AC00_RS19790;end_range=31936,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19790;old_locus_tag=AC00_0862;partial=true;pseudo=true NZ_JJLU01000028.1 Protein Homology CDS 31632 31936 . - 2 ID=cds-AC00_RS19790;Parent=gene-AC00_RS19790;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=31936,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS19790;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000029.1 1 18492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000029.1 RefSeq region 1 18492 . + . ID=NZ_JJLU01000029.1:1..18492;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000029.1 RefSeq pseudogene 1 305 . + . ID=gene-AC00_RS19785;Name=AC00_RS19785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19785;old_locus_tag=AC00_0863;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000029.1 Protein Homology CDS 1 305 . + 2 ID=cds-AC00_RS19785;Parent=gene-AC00_RS19785;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS19785;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000029.1 RefSeq pseudogene 322 1780 . + . ID=gene-AC00_RS19775;Name=espX2;gbkey=Gene;gene=espX2;gene_biotype=pseudogene;locus_tag=AC00_RS19775;old_locus_tag=AC00_0865;partial=true;pseudo=true;start_range=.,322 NZ_JJLU01000029.1 Protein Homology CDS 322 1780 . + 0 ID=cds-AC00_RS19775;Parent=gene-AC00_RS19775;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=espX2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308903.1;locus_tag=AC00_RS19775;partial=true;product=type III secretion system effector EspX2;pseudo=true;start_range=.,322;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 2064 4214 . + . ID=gene-AC00_RS19770;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=AC00_RS19770;old_locus_tag=AC00_0867 NZ_JJLU01000029.1 Protein Homology CDS 2064 4214 . + 0 ID=cds-WP_032280571.1;Parent=gene-AC00_RS19770;Dbxref=GenBank:WP_032280571.1;Name=WP_032280571.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308904.1;locus_tag=AC00_RS19770;product=ATP-dependent DNA helicase DinG;protein_id=WP_032280571.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 4242 5204 . + . ID=gene-AC00_RS19765;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=AC00_RS19765;old_locus_tag=AC00_0868 NZ_JJLU01000029.1 Protein Homology CDS 4242 5204 . + 0 ID=cds-WP_000386515.1;Parent=gene-AC00_RS19765;Dbxref=GenBank:WP_000386515.1;Name=WP_000386515.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415321.1;locus_tag=AC00_RS19765;product=DNA-binding protein YbiB;protein_id=WP_000386515.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 5345 6430 . + . ID=gene-AC00_RS19760;Name=hcxB;gbkey=Gene;gene=hcxB;gene_biotype=protein_coding;locus_tag=AC00_RS19760;old_locus_tag=AC00_0869 NZ_JJLU01000029.1 Protein Homology CDS 5345 6430 . + 0 ID=cds-WP_000443510.1;Parent=gene-AC00_RS19760;Dbxref=GenBank:WP_000443510.1;Name=WP_000443510.1;gbkey=CDS;gene=hcxB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308906.1;locus_tag=AC00_RS19760;product=hydroxycarboxylate dehydrogenase HcXB;protein_id=WP_000443510.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 6497 6556 . + . ID=gene-AC00_RS31135;Name=ybiE;gbkey=Gene;gene=ybiE;gene_biotype=protein_coding;locus_tag=AC00_RS31135 NZ_JJLU01000029.1 Protein Homology CDS 6497 6556 . + 0 ID=cds-WP_211180490.1;Parent=gene-AC00_RS31135;Dbxref=GenBank:WP_211180490.1;Name=WP_211180490.1;gbkey=CDS;gene=ybiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051178.1;locus_tag=AC00_RS31135;product=protein YbiE;protein_id=WP_211180490.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 6659 6919 . - . ID=gene-AC00_RS19755;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=AC00_RS19755;old_locus_tag=AC00_0870 NZ_JJLU01000029.1 Protein Homology CDS 6659 6919 . - 0 ID=cds-WP_000849301.1;Parent=gene-AC00_RS19755;Dbxref=GenBank:WP_000849301.1;Name=WP_000849301.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415323.1;locus_tag=AC00_RS19755;product=DUF1471 family protein YbiJ;protein_id=WP_000849301.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 7185 7451 . - . ID=gene-AC00_RS19750;Name=ybiI;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=AC00_RS19750;old_locus_tag=AC00_0871 NZ_JJLU01000029.1 Protein Homology CDS 7185 7451 . - 0 ID=cds-WP_000146357.1;Parent=gene-AC00_RS19750;Dbxref=GenBank:WP_000146357.1;Name=WP_000146357.1;gbkey=CDS;gene=ybiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308908.1;locus_tag=AC00_RS19750;product=C4-type zinc finger protein YbiI;protein_id=WP_000146357.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 7525 8202 . - . ID=gene-AC00_RS19745;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=AC00_RS19745;old_locus_tag=AC00_0872 NZ_JJLU01000029.1 Protein Homology CDS 7525 8202 . - 0 ID=cds-WP_000990177.1;Parent=gene-AC00_RS19745;Dbxref=GenBank:WP_000990177.1;Name=WP_000990177.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415325.4;locus_tag=AC00_RS19745;product=PKHD-type hydroxylase YbiX;protein_id=WP_000990177.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 8244 10526 . - . ID=gene-AC00_RS19740;Name=fiu;gbkey=Gene;gene=fiu;gene_biotype=protein_coding;locus_tag=AC00_RS19740;old_locus_tag=AC00_0873 NZ_JJLU01000029.1 Protein Homology CDS 8244 10526 . - 0 ID=cds-WP_032280569.1;Parent=gene-AC00_RS19740;Dbxref=GenBank:WP_032280569.1;Name=WP_032280569.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;gene=fiu;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308910.1;locus_tag=AC00_RS19740;product=catecholate siderophore receptor Fiu;protein_id=WP_032280569.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 10791 11051 . - . ID=gene-AC00_RS30200;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=AC00_RS30200;old_locus_tag=AC00_0874 NZ_JJLU01000029.1 Protein Homology CDS 10791 11051 . - 0 ID=cds-WP_000710619.1;Parent=gene-AC00_RS30200;Dbxref=GenBank:WP_000710619.1;Name=WP_000710619.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415327.2;locus_tag=AC00_RS30200;product=DUF1471 family periplasmic protein McbA;protein_id=WP_000710619.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 11327 12253 . + . ID=gene-AC00_RS19730;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=AC00_RS19730;old_locus_tag=AC00_0875 NZ_JJLU01000029.1 Protein Homology CDS 11327 12253 . + 0 ID=cds-WP_032288175.1;Parent=gene-AC00_RS19730;Dbxref=GenBank:WP_032288175.1;Name=WP_032288175.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415328.4;locus_tag=AC00_RS19730;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_032288175.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 12250 14475 . - . ID=gene-AC00_RS19725;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=AC00_RS19725;old_locus_tag=AC00_0876 NZ_JJLU01000029.1 Protein Homology CDS 12250 14475 . - 0 ID=cds-WP_001267214.1;Parent=gene-AC00_RS19725;Dbxref=GenBank:WP_001267214.1;Name=WP_001267214.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=AC00_RS19725;product=mechanosensitive channel protein;protein_id=WP_001267214.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 14592 15314 . - . ID=gene-AC00_RS19720;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=AC00_RS19720;old_locus_tag=AC00_0877 NZ_JJLU01000029.1 Protein Homology CDS 14592 15314 . - 0 ID=cds-WP_000569080.1;Parent=gene-AC00_RS19720;Dbxref=GenBank:WP_000569080.1;Name=WP_000569080.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=AC00_RS19720;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_000569080.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 15311 15970 . - . ID=gene-AC00_RS19715;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=AC00_RS19715;old_locus_tag=AC00_0878 NZ_JJLU01000029.1 Protein Homology CDS 15311 15970 . - 0 ID=cds-WP_001159065.1;Parent=gene-AC00_RS19715;Dbxref=GenBank:WP_001159065.1;Name=WP_001159065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=AC00_RS19715;product=glutamine ABC transporter permease GlnP;protein_id=WP_001159065.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 16109 16855 . - . ID=gene-AC00_RS19710;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=AC00_RS19710;old_locus_tag=AC00_0879 NZ_JJLU01000029.1 Protein Homology CDS 16109 16855 . - 0 ID=cds-WP_000843866.1;Parent=gene-AC00_RS19710;Dbxref=GenBank:WP_000843866.1;Name=WP_000843866.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=AC00_RS19710;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_000843866.1;transl_table=11 NZ_JJLU01000029.1 RefSeq gene 17259 17762 . - . ID=gene-AC00_RS19705;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=AC00_RS19705;old_locus_tag=AC00_0880 NZ_JJLU01000029.1 Protein Homology CDS 17259 17762 . - 0 ID=cds-WP_000100800.1;Parent=gene-AC00_RS19705;Dbxref=GenBank:WP_000100800.1;Name=WP_000100800.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=AC00_RS19705;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100800.1;transl_table=11 NZ_JJLU01000029.1 RefSeq pseudogene 17930 18492 . + . ID=gene-AC00_RS19700;Name=AC00_RS19700;end_range=18492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19700;old_locus_tag=AC00_0881;partial=true;pseudo=true NZ_JJLU01000029.1 Protein Homology CDS 17930 18492 . + 0 ID=cds-AC00_RS19700;Parent=gene-AC00_RS19700;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=18492,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS19700;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000030.1 1 29588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000030.1 RefSeq region 1 29588 . + . ID=NZ_JJLU01000030.1:1..29588;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000030.1 RefSeq gene 1 662 . + . ID=gene-AC00_RS0124035;Name=AC00_RS0124035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124035;old_locus_tag=AC00_0882;partial=true;start_range=.,1 NZ_JJLU01000030.1 Protein Homology CDS 1 214 . + 0 ID=cds-WP_231248335.1-2;Parent=gene-AC00_RS0124035;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124035;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;start_range=.,1;transl_table=11 NZ_JJLU01000030.1 Protein Homology CDS 214 662 . + 2 ID=cds-WP_231248335.1-2;Parent=gene-AC00_RS0124035;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124035;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 873 1760 . - . ID=gene-AC00_RS19695;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=AC00_RS19695;old_locus_tag=AC00_0883 NZ_JJLU01000030.1 Protein Homology CDS 873 1760 . - 0 ID=cds-WP_001295297.1;Parent=gene-AC00_RS19695;Dbxref=GenBank:WP_001295297.1;Name=WP_001295297.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308918.1;locus_tag=AC00_RS19695;product=threonine/homoserine exporter RhtA;protein_id=WP_001295297.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 1995 2060 . + . ID=gene-AC00_RS30205;Name=AC00_RS30205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30205 NZ_JJLU01000030.1 Protein Homology CDS 1995 2060 . + 0 ID=cds-WP_120795379.1;Parent=gene-AC00_RS30205;Dbxref=GenBank:WP_120795379.1;Name=WP_120795379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518760.1;locus_tag=AC00_RS30205;product=protein YliM;protein_id=WP_120795379.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 2113 2628 . + . ID=gene-AC00_RS19690;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=AC00_RS19690;old_locus_tag=AC00_0884 NZ_JJLU01000030.1 Protein Homology CDS 2113 2628 . + 0 ID=cds-WP_001462337.1;Parent=gene-AC00_RS19690;Dbxref=GenBank:WP_001462337.1;Name=WP_001462337.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308919.1;locus_tag=AC00_RS19690;product=outer membrane protein OmpX;protein_id=WP_001462337.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 2677 4260 . - . ID=gene-AC00_RS19685;Name=opgE;gbkey=Gene;gene=opgE;gene_biotype=protein_coding;locus_tag=AC00_RS19685;old_locus_tag=AC00_0885 NZ_JJLU01000030.1 Protein Homology CDS 2677 4260 . - 0 ID=cds-WP_001054678.1;Parent=gene-AC00_RS19685;Dbxref=GenBank:WP_001054678.1;Name=WP_001054678.1;gbkey=CDS;gene=opgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415336.1;locus_tag=AC00_RS19685;product=phosphoethanolamine transferase;protein_id=WP_001054678.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 4532 4660 . - . ID=gene-AC00_RS19680;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=AC00_RS19680;old_locus_tag=AC00_0886 NZ_JJLU01000030.1 Protein Homology CDS 4532 4660 . - 0 ID=cds-WP_001001761.1;Parent=gene-AC00_RS19680;Dbxref=GenBank:WP_001001761.1;Name=WP_001001761.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439233.1;locus_tag=AC00_RS19680;product=manganase accumulation protein MntS;protein_id=WP_001001761.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 4846 5313 . + . ID=gene-AC00_RS19675;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=AC00_RS19675;old_locus_tag=AC00_0887 NZ_JJLU01000030.1 Protein Homology CDS 4846 5313 . + 0 ID=cds-WP_000091016.1;Parent=gene-AC00_RS19675;Dbxref=GenBank:WP_000091016.1;Name=WP_000091016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415338.1;locus_tag=AC00_RS19675;product=manganese-binding transcriptional regulator MntR;protein_id=WP_000091016.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 5310 6428 . + . ID=gene-AC00_RS19670;Name=ybiR;gbkey=Gene;gene=ybiR;gene_biotype=protein_coding;locus_tag=AC00_RS19670;old_locus_tag=AC00_0888 NZ_JJLU01000030.1 Protein Homology CDS 5310 6428 . + 0 ID=cds-WP_000056453.1;Parent=gene-AC00_RS19670;Dbxref=GenBank:WP_000056453.1;Name=WP_000056453.1;gbkey=CDS;gene=ybiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308922.1;locus_tag=AC00_RS19670;product=anion transporter;protein_id=WP_000056453.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 6486 7406 . - . ID=gene-AC00_RS19665;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=AC00_RS19665;old_locus_tag=AC00_0889 NZ_JJLU01000030.1 Protein Homology CDS 6486 7406 . - 0 ID=cds-WP_001056384.1;Parent=gene-AC00_RS19665;Dbxref=GenBank:WP_001056384.1;Name=WP_001056384.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=AC00_RS19665;product=L%2CD-transpeptidase;protein_id=WP_001056384.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 7625 9217 . + . ID=gene-AC00_RS19660;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=AC00_RS19660;old_locus_tag=AC00_0890 NZ_JJLU01000030.1 Protein Homology CDS 7625 9217 . + 0 ID=cds-WP_000961458.1;Parent=gene-AC00_RS19660;Dbxref=GenBank:WP_000961458.1;Name=WP_000961458.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ybiT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=AC00_RS19660;product=ABC-F family ATPase;protein_id=WP_000961458.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 9458 10723 . - . ID=gene-AC00_RS19655;Name=ybiU;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=AC00_RS19655;old_locus_tag=AC00_0891 NZ_JJLU01000030.1 Protein Homology CDS 9458 10723 . - 0 ID=cds-WP_000168787.1;Parent=gene-AC00_RS19655;Dbxref=GenBank:WP_000168787.1;Name=WP_000168787.1;gbkey=CDS;gene=ybiU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308925.1;locus_tag=AC00_RS19655;product=DUF1479 domain-containing protein;protein_id=WP_000168787.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 10875 11690 . - . ID=gene-AC00_RS19650;Name=ybiV;gbkey=Gene;gene=ybiV;gene_biotype=protein_coding;locus_tag=AC00_RS19650;old_locus_tag=AC00_0892 NZ_JJLU01000030.1 Protein Homology CDS 10875 11690 . - 0 ID=cds-WP_000114270.1;Parent=gene-AC00_RS19650;Dbxref=GenBank:WP_000114270.1;Name=WP_000114270.1;gbkey=CDS;gene=ybiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706699.1;locus_tag=AC00_RS19650;product=sugar-phosphatase YbiV;protein_id=WP_000114270.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 11836 14268 . - . ID=gene-AC00_RS19645;Name=ybiW;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=AC00_RS19645;old_locus_tag=AC00_0893 NZ_JJLU01000030.1 Protein Homology CDS 11836 14268 . - 0 ID=cds-WP_000209324.1;Parent=gene-AC00_RS19645;Dbxref=GenBank:WP_000209324.1;Name=WP_000209324.1;gbkey=CDS;gene=ybiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415344.1;locus_tag=AC00_RS19645;product=glycyl radical protein;protein_id=WP_000209324.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 14274 15173 . - . ID=gene-AC00_RS19640;Name=ybiY;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=AC00_RS19640;old_locus_tag=AC00_0894 NZ_JJLU01000030.1 Protein Homology CDS 14274 15173 . - 0 ID=cds-WP_032280573.1;Parent=gene-AC00_RS19640;Dbxref=GenBank:WP_032280573.1;Name=WP_032280573.1;gbkey=CDS;gene=ybiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=AC00_RS19640;product=glycyl-radical enzyme activating protein;protein_id=WP_032280573.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 15304 15966 . + . ID=gene-AC00_RS19635;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AC00_RS19635;old_locus_tag=AC00_0895 NZ_JJLU01000030.1 Protein Homology CDS 15304 15966 . + 0 ID=cds-WP_001424155.1;Parent=gene-AC00_RS19635;Dbxref=GenBank:WP_001424155.1;Name=WP_001424155.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=AC00_RS19635;product=fructose-6-phosphate aldolase;protein_id=WP_001424155.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 16042 16791 . - . ID=gene-AC00_RS19630;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=AC00_RS19630;old_locus_tag=AC00_0896 NZ_JJLU01000030.1 Protein Homology CDS 16042 16791 . - 0 ID=cds-WP_032280574.1;Parent=gene-AC00_RS19630;Dbxref=GenBank:WP_032280574.1;Name=WP_032280574.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706703.1;locus_tag=AC00_RS19630;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_032280574.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 16791 18026 . - . ID=gene-AC00_RS19625;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=AC00_RS19625;old_locus_tag=AC00_0897 NZ_JJLU01000030.1 Protein Homology CDS 16791 18026 . - 0 ID=cds-WP_000397360.1;Parent=gene-AC00_RS19625;Dbxref=GenBank:WP_000397360.1;Name=WP_000397360.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308932.1;locus_tag=AC00_RS19625;product=molybdopterin molybdotransferase MoeA;protein_id=WP_000397360.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 18230 19195 . + . ID=gene-AC00_RS19620;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=AC00_RS19620;old_locus_tag=AC00_0898 NZ_JJLU01000030.1 Protein Homology CDS 18230 19195 . + 0 ID=cds-WP_000513761.1;Parent=gene-AC00_RS19620;Dbxref=GenBank:WP_000513761.1;Name=WP_000513761.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706705.1;locus_tag=AC00_RS19620;product=beta-aspartyl-peptidase;protein_id=WP_000513761.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 19182 21053 . + . ID=gene-AC00_RS19615;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=AC00_RS19615;old_locus_tag=AC00_0899 NZ_JJLU01000030.1 Protein Homology CDS 19182 21053 . + 0 ID=cds-WP_032280575.1;Parent=gene-AC00_RS19615;Dbxref=GenBank:WP_032280575.1;Name=WP_032280575.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308935.2;locus_tag=AC00_RS19615;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_032280575.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 21073 22611 . + . ID=gene-AC00_RS19610;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=AC00_RS19610;old_locus_tag=AC00_0900 NZ_JJLU01000030.1 Protein Homology CDS 21073 22611 . + 0 ID=cds-WP_032280576.1;Parent=gene-AC00_RS19610;Dbxref=GenBank:WP_032280576.1;Name=WP_032280576.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308936.1;locus_tag=AC00_RS19610;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_032280576.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 22629 23549 . + . ID=gene-AC00_RS19605;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=AC00_RS19605;old_locus_tag=AC00_0901 NZ_JJLU01000030.1 Protein Homology CDS 22629 23549 . + 0 ID=cds-WP_000936043.1;Parent=gene-AC00_RS19605;Dbxref=GenBank:WP_000936043.1;Name=WP_000936043.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415352.1;locus_tag=AC00_RS19605;product=glutathione ABC transporter permease GsiC;protein_id=WP_000936043.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 23552 24463 . + . ID=gene-AC00_RS19600;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=AC00_RS19600;old_locus_tag=AC00_0902 NZ_JJLU01000030.1 Protein Homology CDS 23552 24463 . + 0 ID=cds-WP_001236044.1;Parent=gene-AC00_RS19600;Dbxref=GenBank:WP_001236044.1;Name=WP_001236044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308938.1;locus_tag=AC00_RS19600;product=glutathione ABC transporter permease GsiD;protein_id=WP_001236044.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 24641 26989 . + . ID=gene-AC00_RS19595;Name=pdeI;gbkey=Gene;gene=pdeI;gene_biotype=protein_coding;locus_tag=AC00_RS19595;old_locus_tag=AC00_0903 NZ_JJLU01000030.1 Protein Homology CDS 24641 26989 . + 0 ID=cds-WP_032280581.1;Parent=gene-AC00_RS19595;Dbxref=GenBank:WP_032280581.1;Name=WP_032280581.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;gene=pdeI;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415354.1;locus_tag=AC00_RS19595;product=sensor domain-containing phosphodiesterase;protein_id=WP_032280581.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 26997 28325 . + . ID=gene-AC00_RS19590;Name=dgcI;gbkey=Gene;gene=dgcI;gene_biotype=protein_coding;locus_tag=AC00_RS19590;old_locus_tag=AC00_0904 NZ_JJLU01000030.1 Protein Homology CDS 26997 28325 . + 0 ID=cds-WP_032280577.1;Parent=gene-AC00_RS19590;Dbxref=GenBank:WP_032280577.1;Name=WP_032280577.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;gene=dgcI;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308940.1;locus_tag=AC00_RS19590;product=GGDEF domain-containing protein;protein_id=WP_032280577.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 28395 28724 . - . ID=gene-AC00_RS19585;Name=AC00_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19585;old_locus_tag=AC00_0905 NZ_JJLU01000030.1 Protein Homology CDS 28395 28724 . - 0 ID=cds-WP_001280945.1;Parent=gene-AC00_RS19585;Dbxref=GenBank:WP_001280945.1;Name=WP_001280945.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502595.1;locus_tag=AC00_RS19585;product=helix-turn-helix domain-containing protein;protein_id=WP_001280945.1;transl_table=11 NZ_JJLU01000030.1 RefSeq gene 28714 29100 . - . ID=gene-AC00_RS19580;Name=AC00_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19580;old_locus_tag=AC00_0906 NZ_JJLU01000030.1 Protein Homology CDS 28714 29100 . - 0 ID=cds-WP_032280579.1;Parent=gene-AC00_RS19580;Dbxref=GenBank:WP_032280579.1;Name=WP_032280579.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502596.1;locus_tag=AC00_RS19580;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_032280579.1;transl_table=11 NZ_JJLU01000030.1 RefSeq pseudogene 29467 29588 . - . ID=gene-AC00_RS29340;Name=AC00_RS29340;end_range=29588,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29340;old_locus_tag=AC00_0907;partial=true;pseudo=true NZ_JJLU01000030.1 Protein Homology CDS 29467 29588 . - 2 ID=cds-AC00_RS29340;Parent=gene-AC00_RS29340;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=29588,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS29340;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000031.1 1 10878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000031.1 RefSeq region 1 10878 . + . ID=NZ_JJLU01000031.1:1..10878;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000031.1 RefSeq gene 1 246 . - . ID=gene-AC00_RS19570;Name=AC00_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19570;old_locus_tag=AC00_0908;partial=true;start_range=.,1 NZ_JJLU01000031.1 Protein Homology CDS 1 246 . - 0 ID=cds-WP_032288177.1;Parent=gene-AC00_RS19570;Dbxref=GenBank:WP_032288177.1;Name=WP_032288177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS19570;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032288177.1;start_range=.,1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 245 1630 . + . ID=gene-AC00_RS0124040;Name=AC00_RS0124040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124040;old_locus_tag=AC00_0909 NZ_JJLU01000031.1 Protein Homology CDS 245 1630 . + 0 ID=cds-WP_050438633.1;Parent=gene-AC00_RS0124040;Dbxref=GenBank:WP_050438633.1;Name=WP_050438633.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.6;locus_tag=AC00_RS0124040;product=AAA family ATPase;protein_id=WP_050438633.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 1684 2712 . - . ID=gene-AC00_RS19565;Name=AC00_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19565;old_locus_tag=AC00_0910 NZ_JJLU01000031.1 Protein Homology CDS 1684 2712 . - 0 ID=cds-WP_032288178.1;Parent=gene-AC00_RS19565;Dbxref=GenBank:WP_032288178.1;Name=WP_032288178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000520367.1;locus_tag=AC00_RS19565;product=phage portal protein;protein_id=WP_032288178.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 2712 4475 . - . ID=gene-AC00_RS19560;Name=AC00_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19560;old_locus_tag=AC00_0911 NZ_JJLU01000031.1 Protein Homology CDS 2712 4475 . - 0 ID=cds-WP_032280584.1;Parent=gene-AC00_RS19560;Dbxref=GenBank:WP_032280584.1;Name=WP_032280584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185719.1;locus_tag=AC00_RS19560;product=terminase ATPase subunit family protein;protein_id=WP_032280584.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 4616 5449 . + . ID=gene-AC00_RS19555;Name=AC00_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19555;old_locus_tag=AC00_0912 NZ_JJLU01000031.1 Protein Homology CDS 4616 5449 . + 0 ID=cds-WP_032280585.1;Parent=gene-AC00_RS19555;Dbxref=GenBank:WP_032280585.1;Name=WP_032280585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226021.1;locus_tag=AC00_RS19555;product=GPO family capsid scaffolding protein;protein_id=WP_032280585.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 5466 6542 . + . ID=gene-AC00_RS19550;Name=AC00_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19550;old_locus_tag=AC00_0913 NZ_JJLU01000031.1 Protein Homology CDS 5466 6542 . + 0 ID=cds-WP_032280587.1;Parent=gene-AC00_RS19550;Dbxref=GenBank:WP_032280587.1;Name=WP_032280587.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001714844.1;locus_tag=AC00_RS19550;product=phage major capsid protein%2C P2 family;protein_id=WP_032280587.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 6546 7196 . + . ID=gene-AC00_RS19545;Name=AC00_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19545;old_locus_tag=AC00_0914 NZ_JJLU01000031.1 Protein Homology CDS 6546 7196 . + 0 ID=cds-WP_032280588.1;Parent=gene-AC00_RS19545;Dbxref=GenBank:WP_032280588.1;Name=WP_032280588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226023.1;locus_tag=AC00_RS19545;product=terminase endonuclease subunit;protein_id=WP_032280588.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 7290 7754 . + . ID=gene-AC00_RS19540;Name=AC00_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19540;old_locus_tag=AC00_0915 NZ_JJLU01000031.1 Protein Homology CDS 7290 7754 . + 0 ID=cds-WP_032280589.1;Parent=gene-AC00_RS19540;Dbxref=GenBank:WP_032280589.1;Name=WP_032280589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461646.1;locus_tag=AC00_RS19540;product=head completion/stabilization protein;protein_id=WP_032280589.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 7754 7957 . + . ID=gene-AC00_RS19535;Name=AC00_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19535;old_locus_tag=AC00_0916 NZ_JJLU01000031.1 Protein Homology CDS 7754 7957 . + 0 ID=cds-WP_032280591.1;Parent=gene-AC00_RS19535;Dbxref=GenBank:WP_032280591.1;Name=WP_032280591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226025.1;locus_tag=AC00_RS19535;product=tail protein X;protein_id=WP_032280591.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 7961 8176 . + . ID=gene-AC00_RS19530;Name=AC00_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19530;old_locus_tag=AC00_0917 NZ_JJLU01000031.1 Protein Homology CDS 7961 8176 . + 0 ID=cds-WP_032280592.1;Parent=gene-AC00_RS19530;Dbxref=GenBank:WP_032280592.1;Name=WP_032280592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397650.1;locus_tag=AC00_RS19530;product=HP1 family phage holin;protein_id=WP_032280592.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 8157 8666 . + . ID=gene-AC00_RS19525;Name=AC00_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19525;old_locus_tag=AC00_0918 NZ_JJLU01000031.1 Protein Homology CDS 8157 8666 . + 0 ID=cds-WP_032280593.1;Parent=gene-AC00_RS19525;Dbxref=GenBank:WP_032280593.1;Name=WP_032280593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605002.1;locus_tag=AC00_RS19525;product=lysozyme;protein_id=WP_032280593.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 8697 9122 . + . ID=gene-AC00_RS19520;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=AC00_RS19520;old_locus_tag=AC00_0919 NZ_JJLU01000031.1 Protein Homology CDS 8697 9122 . + 0 ID=cds-WP_032280594.1;Parent=gene-AC00_RS19520;Dbxref=GenBank:WP_032280594.1;Name=WP_032280594.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461642.1;locus_tag=AC00_RS19520;product=Rz-like lysis system protein LysB;protein_id=WP_032280594.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 9010 9255 . + . ID=gene-AC00_RS31140;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC00_RS31140 NZ_JJLU01000031.1 Protein Homology CDS 9010 9255 . + 0 ID=cds-WP_248790324.1;Parent=gene-AC00_RS31140;Dbxref=GenBank:WP_248790324.1;Name=WP_248790324.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989060.1;locus_tag=AC00_RS31140;product=Rz1-like lysis system protein LysC;protein_id=WP_248790324.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 9218 9652 . + . ID=gene-AC00_RS19515;Name=AC00_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19515;old_locus_tag=AC00_0920 NZ_JJLU01000031.1 Protein Homology CDS 9218 9652 . + 0 ID=cds-WP_032280595.1;Parent=gene-AC00_RS19515;Dbxref=GenBank:WP_032280595.1;Name=WP_032280595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=AC00_RS19515;product=phage tail protein;protein_id=WP_032280595.1;transl_table=11 NZ_JJLU01000031.1 RefSeq gene 9645 10091 . + . ID=gene-AC00_RS19510;Name=AC00_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19510;old_locus_tag=AC00_0921 NZ_JJLU01000031.1 Protein Homology CDS 9645 10091 . + 0 ID=cds-WP_032280596.1;Parent=gene-AC00_RS19510;Dbxref=GenBank:WP_032280596.1;Name=WP_032280596.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704965.1;locus_tag=AC00_RS19510;product=phage virion morphogenesis protein;protein_id=WP_032280596.1;transl_table=11 NZ_JJLU01000031.1 RefSeq pseudogene 10576 10878 . - . ID=gene-AC00_RS19505;Name=AC00_RS19505;end_range=10878,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19505;old_locus_tag=AC00_0923;partial=true;pseudo=true NZ_JJLU01000031.1 Protein Homology CDS 10576 10878 . - 0 ID=cds-AC00_RS19505;Parent=gene-AC00_RS19505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=10878,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS19505;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000032.1 1 26629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000032.1 RefSeq region 1 26629 . + . ID=NZ_JJLU01000032.1:1..26629;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000032.1 RefSeq gene 1 251 . - . ID=gene-AC00_RS19500;Name=AC00_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19500;old_locus_tag=AC00_0924;partial=true;start_range=.,1 NZ_JJLU01000032.1 Protein Homology CDS 1 251 . - 0 ID=cds-WP_000019381.1;Parent=gene-AC00_RS19500;Dbxref=GenBank:WP_000019381.1;Name=WP_000019381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS19500;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_000019381.1;start_range=.,1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 329 1654 . - . ID=gene-AC00_RS19495;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AC00_RS19495;old_locus_tag=AC00_0925 NZ_JJLU01000032.1 Protein Homology CDS 329 1654 . - 0 ID=cds-WP_000049367.1;Parent=gene-AC00_RS19495;Dbxref=GenBank:WP_000049367.1;Name=WP_000049367.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=AC00_RS19495;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_000049367.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 1867 2250 . + . ID=gene-AC00_RS0124045;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=AC00_RS0124045;old_locus_tag=AC00_0926 NZ_JJLU01000032.1 Protein Homology CDS 1867 2250 . + 0 ID=cds-WP_000497137.1;Parent=gene-AC00_RS0124045;Dbxref=GenBank:WP_000497137.1;Name=WP_000497137.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308943.1;locus_tag=AC00_RS0124045;product=biofilm formation regulator BssR;protein_id=WP_000497137.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 2361 3476 . + . ID=gene-AC00_RS19490;Name=yliI;gbkey=Gene;gene=yliI;gene_biotype=protein_coding;locus_tag=AC00_RS19490;old_locus_tag=AC00_0927 NZ_JJLU01000032.1 Protein Homology CDS 2361 3476 . + 0 ID=cds-WP_032280599.1;Parent=gene-AC00_RS19490;Dbxref=GenBank:WP_032280599.1;Name=WP_032280599.1;gbkey=CDS;gene=yliI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415358.1;locus_tag=AC00_RS19490;product=aldose sugar dehydrogenase YliI;protein_id=WP_032280599.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 3473 4099 . - . ID=gene-AC00_RS19485;Name=gstB;gbkey=Gene;gene=gstB;gene_biotype=protein_coding;locus_tag=AC00_RS19485;old_locus_tag=AC00_0928 NZ_JJLU01000032.1 Protein Homology CDS 3473 4099 . - 0 ID=cds-WP_032280600.1;Parent=gene-AC00_RS19485;Dbxref=GenBank:WP_032280600.1;Name=WP_032280600.1;gbkey=CDS;gene=gstB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308945.2;locus_tag=AC00_RS19485;product=glutathione S-transferase GstB;protein_id=WP_032280600.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 4346 5548 . + . ID=gene-AC00_RS19480;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=AC00_RS19480;old_locus_tag=AC00_0929 NZ_JJLU01000032.1 Protein Homology CDS 4346 5548 . + 0 ID=cds-WP_000195961.1;Parent=gene-AC00_RS19480;Dbxref=GenBank:WP_000195961.1;Name=WP_000195961.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308946.1;locus_tag=AC00_RS19480;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_000195961.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 5595 6353 . - . ID=gene-AC00_RS19475;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=AC00_RS19475;old_locus_tag=AC00_0930 NZ_JJLU01000032.1 Protein Homology CDS 5595 6353 . - 0 ID=cds-WP_000450121.1;Parent=gene-AC00_RS19475;Dbxref=GenBank:WP_000450121.1;Name=WP_000450121.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308947.1;locus_tag=AC00_RS19475;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_000450121.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 6411 7007 . - . ID=gene-AC00_RS19470;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=AC00_RS19470;old_locus_tag=AC00_0931 NZ_JJLU01000032.1 Protein Homology CDS 6411 7007 . - 0 ID=cds-WP_000892317.1;Parent=gene-AC00_RS19470;Dbxref=GenBank:WP_000892317.1;Name=WP_000892317.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308948.1;locus_tag=AC00_RS19470;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_000892317.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 7292 8524 . + . ID=gene-AC00_RS19465;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;locus_tag=AC00_RS19465;old_locus_tag=AC00_0932 NZ_JJLU01000032.1 Protein Homology CDS 7292 8524 . + 0 ID=cds-WP_001180089.1;Parent=gene-AC00_RS19465;Dbxref=GenBank:WP_001180089.1;Name=WP_001180089.1;gbkey=CDS;gene=mdfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308949.1;locus_tag=AC00_RS19465;product=multidrug efflux MFS transporter MdfA;protein_id=WP_001180089.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 8565 8849 . - . ID=gene-AC00_RS19460;Name=ybjH;gbkey=Gene;gene=ybjH;gene_biotype=protein_coding;locus_tag=AC00_RS19460;old_locus_tag=AC00_0933 NZ_JJLU01000032.1 Protein Homology CDS 8565 8849 . - 0 ID=cds-WP_000480892.1;Parent=gene-AC00_RS19460;Dbxref=GenBank:WP_000480892.1;Name=WP_000480892.1;gbkey=CDS;gene=ybjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415364.1;locus_tag=AC00_RS19460;product=protein YbjH;protein_id=WP_000480892.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 8935 9750 . - . ID=gene-AC00_RS19455;Name=ybjI;gbkey=Gene;gene=ybjI;gene_biotype=protein_coding;locus_tag=AC00_RS19455;old_locus_tag=AC00_0934 NZ_JJLU01000032.1 Protein Homology CDS 8935 9750 . - 0 ID=cds-WP_032280602.1;Parent=gene-AC00_RS19455;Dbxref=GenBank:WP_032280602.1;Name=WP_032280602.1;gbkey=CDS;gene=ybjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308951.2;locus_tag=AC00_RS19455;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase;protein_id=WP_032280602.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 9750 10958 . - . ID=gene-AC00_RS19450;Name=ybjJ;gbkey=Gene;gene=ybjJ;gene_biotype=protein_coding;locus_tag=AC00_RS19450;old_locus_tag=AC00_0935 NZ_JJLU01000032.1 Protein Homology CDS 9750 10958 . - 0 ID=cds-WP_032280603.1;Parent=gene-AC00_RS19450;Dbxref=GenBank:WP_032280603.1;Name=WP_032280603.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ybjJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308952.1;locus_tag=AC00_RS19450;product=MFS transporter;protein_id=WP_032280603.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 11042 11578 . + . ID=gene-AC00_RS19445;Name=rcdA;gbkey=Gene;gene=rcdA;gene_biotype=protein_coding;locus_tag=AC00_RS19445;old_locus_tag=AC00_0936 NZ_JJLU01000032.1 Protein Homology CDS 11042 11578 . + 0 ID=cds-WP_028132104.1;Parent=gene-AC00_RS19445;Dbxref=GenBank:WP_028132104.1;Name=WP_028132104.1;gbkey=CDS;gene=rcdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308953.1;locus_tag=AC00_RS19445;product=DNA-binding transcriptional regulator RcdA;protein_id=WP_028132104.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 11753 13438 . - . ID=gene-AC00_RS19440;Name=ybjL;gbkey=Gene;gene=ybjL;gene_biotype=protein_coding;locus_tag=AC00_RS19440;old_locus_tag=AC00_0937 NZ_JJLU01000032.1 Protein Homology CDS 11753 13438 . - 0 ID=cds-WP_032280606.1;Parent=gene-AC00_RS19440;Dbxref=GenBank:WP_032280606.1;Name=WP_032280606.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=ybjL;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=AC00_RS19440;product=aspartate:alanine antiporter;protein_id=WP_032280606.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 13708 14085 . + . ID=gene-AC00_RS19435;Name=ybjM;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=AC00_RS19435;old_locus_tag=AC00_0938 NZ_JJLU01000032.1 Protein Homology CDS 13708 14085 . + 0 ID=cds-WP_000681108.1;Parent=gene-AC00_RS19435;Dbxref=GenBank:WP_000681108.1;Name=WP_000681108.1;gbkey=CDS;gene=ybjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308955.1;locus_tag=AC00_RS19435;product=inner membrane protein YbjM;protein_id=WP_000681108.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 14115 14372 . - . ID=gene-AC00_RS19430;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=AC00_RS19430;old_locus_tag=AC00_0939 NZ_JJLU01000032.1 Protein Homology CDS 14115 14372 . - 0 ID=cds-WP_001195231.1;Parent=gene-AC00_RS19430;Dbxref=GenBank:WP_001195231.1;Name=WP_001195231.1;gbkey=CDS;gene=grxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308956.1;locus_tag=AC00_RS19430;product=glutaredoxin 1;protein_id=WP_001195231.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 14532 14819 . + . ID=gene-AC00_RS19425;Name=ybjC;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=AC00_RS19425;old_locus_tag=AC00_0940 NZ_JJLU01000032.1 Protein Homology CDS 14532 14819 . + 0 ID=cds-WP_001201576.1;Parent=gene-AC00_RS19425;Dbxref=GenBank:WP_001201576.1;Name=WP_001201576.1;gbkey=CDS;gene=ybjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308957.1;locus_tag=AC00_RS19425;product=DUF1418 family protein;protein_id=WP_001201576.1;transl_table=11 NZ_JJLU01000032.1 RefSeq pseudogene 14803 15526 . + . ID=gene-AC00_RS0124050;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=pseudogene;locus_tag=AC00_RS0124050;pseudo=true NZ_JJLU01000032.1 Protein Homology CDS 14803 15526 . + 0 ID=cds-AC00_RS0124050;Parent=gene-AC00_RS0124050;Note=frameshifted;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308958.1;locus_tag=AC00_RS0124050;product=nitroreductase NfsA;pseudo=true;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 15587 16489 . + . ID=gene-AC00_RS19420;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=AC00_RS19420;old_locus_tag=AC00_0942 NZ_JJLU01000032.1 Protein Homology CDS 15587 16489 . + 0 ID=cds-WP_000684321.1;Parent=gene-AC00_RS19420;Dbxref=GenBank:WP_000684321.1;Name=WP_000684321.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=AC00_RS19420;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_000684321.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 16577 17053 . + . ID=gene-AC00_RS19415;Name=ybjN;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=AC00_RS19415;old_locus_tag=AC00_0943 NZ_JJLU01000032.1 Protein Homology CDS 16577 17053 . + 0 ID=cds-WP_000203025.1;Parent=gene-AC00_RS19415;Dbxref=GenBank:WP_000203025.1;Name=WP_000203025.1;gbkey=CDS;gene=ybjN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308960.1;locus_tag=AC00_RS19415;product=YbjN domain-containing protein;protein_id=WP_000203025.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 17404 18516 . + . ID=gene-AC00_RS19405;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=AC00_RS19405;old_locus_tag=AC00_0946 NZ_JJLU01000032.1 Protein Homology CDS 17404 18516 . + 0 ID=cds-WP_000126069.1;Parent=gene-AC00_RS19405;Dbxref=GenBank:WP_000126069.1;Name=WP_000126069.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308961.1;locus_tag=AC00_RS19405;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_000126069.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 18611 19744 . + . ID=gene-AC00_RS19400;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=AC00_RS19400;old_locus_tag=AC00_0947 NZ_JJLU01000032.1 Protein Homology CDS 18611 19744 . + 0 ID=cds-WP_032280607.1;Parent=gene-AC00_RS19400;Dbxref=GenBank:WP_032280607.1;Name=WP_032280607.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=AC00_RS19400;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_032280607.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 19754 20707 . + . ID=gene-AC00_RS19395;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=AC00_RS19395;old_locus_tag=AC00_0948 NZ_JJLU01000032.1 Protein Homology CDS 19754 20707 . + 0 ID=cds-WP_032280609.1;Parent=gene-AC00_RS19395;Dbxref=GenBank:WP_032280609.1;Name=WP_032280609.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308963.1;locus_tag=AC00_RS19395;product=putrescine ABC transporter permease PotH;protein_id=WP_032280609.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 20704 21549 . + . ID=gene-AC00_RS19390;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=AC00_RS19390;old_locus_tag=AC00_0949 NZ_JJLU01000032.1 Protein Homology CDS 20704 21549 . + 0 ID=cds-WP_001061658.1;Parent=gene-AC00_RS19390;Dbxref=GenBank:WP_001061658.1;Name=WP_001061658.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415378.1;locus_tag=AC00_RS19390;product=putrescine ABC transporter permease PotI;protein_id=WP_001061658.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 21609 22097 . + . ID=gene-AC00_RS19385;Name=ybjO;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=AC00_RS19385;old_locus_tag=AC00_0950 NZ_JJLU01000032.1 Protein Homology CDS 21609 22097 . + 0 ID=cds-WP_000389260.1;Parent=gene-AC00_RS19385;Dbxref=GenBank:WP_000389260.1;Name=WP_000389260.1;gbkey=CDS;gene=ybjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308965.1;locus_tag=AC00_RS19385;product=YbjO family protein;protein_id=WP_000389260.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 22138 23265 . + . ID=gene-AC00_RS19380;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=AC00_RS19380;old_locus_tag=AC00_0951 NZ_JJLU01000032.1 Protein Homology CDS 22138 23265 . + 0 ID=cds-WP_023307816.1;Parent=gene-AC00_RS19380;Dbxref=GenBank:WP_023307816.1;Name=WP_023307816.1;Ontology_term=GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308966.1;locus_tag=AC00_RS19380;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_023307816.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 23545 24888 . + . ID=gene-AC00_RS19375;Name=AC00_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19375;old_locus_tag=AC00_0952 NZ_JJLU01000032.1 Protein Homology CDS 23545 24888 . + 0 ID=cds-WP_000399304.1;Parent=gene-AC00_RS19375;Dbxref=GenBank:WP_000399304.1;Name=WP_000399304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000399308.1;locus_tag=AC00_RS19375;product=PTS sugar transporter subunit IIC;protein_id=WP_000399304.1;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 24910 25230 . + . ID=gene-AC00_RS19370;Name=AC00_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19370;old_locus_tag=AC00_0953 NZ_JJLU01000032.1 Protein Homology CDS 24910 25230 . + 0 ID=cds-WP_000655511.1;Parent=gene-AC00_RS19370;Dbxref=GenBank:WP_000655511.1;Name=WP_000655511.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308968.1;locus_tag=AC00_RS19370;product=PTS sugar transporter subunit IIB;protein_id=WP_000655511.1;transl_table=11 NZ_JJLU01000032.1 RefSeq pseudogene 25242 25508 . + . ID=gene-AC00_RS19365;Name=AC00_RS19365;end_range=25508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19365;old_locus_tag=AC00_0954;partial=true;pseudo=true NZ_JJLU01000032.1 Protein Homology CDS 25242 25508 . + 0 ID=cds-AC00_RS19365;Parent=gene-AC00_RS19365;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008484;end_range=25508,.;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308969.1;locus_tag=AC00_RS19365;partial=true;product=sulfatase-like hydrolase/transferase;pseudo=true;transl_table=11 NZ_JJLU01000032.1 RefSeq gene 25679 26629 . - . ID=gene-AC00_RS19360;Name=AC00_RS19360;end_range=26629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19360;old_locus_tag=AC00_0955;partial=true NZ_JJLU01000032.1 Protein Homology CDS 25679 26629 . - 0 ID=cds-WP_012738266.1-3;Parent=gene-AC00_RS19360;Dbxref=GenBank:WP_012738266.1;Name=WP_012738266.1;Ontology_term=GO:0006313,GO:0004803;end_range=26629,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS19360;partial=true;product=IS4 family transposase;protein_id=WP_012738266.1;transl_table=11 ##sequence-region NZ_JJLU01000033.1 1 7852 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000033.1 RefSeq region 1 7852 . + . ID=NZ_JJLU01000033.1:1..7852;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000033.1 RefSeq gene 1 93 . - . ID=gene-AC00_RS31145;Name=AC00_RS31145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31145;old_locus_tag=AC00_0956;partial=true;start_range=.,1 NZ_JJLU01000033.1 Protein Homology CDS 1 93 . - 0 ID=cds-WP_001639222.1;Parent=gene-AC00_RS31145;Dbxref=GenBank:WP_001639222.1;Name=WP_001639222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS31145;partial=true;product=hypothetical protein;protein_id=WP_001639222.1;start_range=.,1;transl_table=11 NZ_JJLU01000033.1 RefSeq pseudogene 148 1374 . + . ID=gene-AC00_RS0124055;Name=AC00_RS0124055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124055;partial=true;pseudo=true;start_range=.,148 NZ_JJLU01000033.1 Protein Homology CDS 148 1374 . + 0 ID=cds-AC00_RS0124055;Parent=gene-AC00_RS0124055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308969.1;locus_tag=AC00_RS0124055;partial=true;product=sulfatase;pseudo=true;start_range=.,148;transl_table=11 NZ_JJLU01000033.1 RefSeq gene 1425 2156 . - . ID=gene-AC00_RS19355;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=AC00_RS19355;old_locus_tag=AC00_0958 NZ_JJLU01000033.1 Protein Homology CDS 1425 2156 . - 0 ID=cds-WP_032280612.1;Parent=gene-AC00_RS19355;Dbxref=GenBank:WP_032280612.1;Name=WP_032280612.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415381.1;locus_tag=AC00_RS19355;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_032280612.1;transl_table=11 NZ_JJLU01000033.1 RefSeq gene 2485 3153 . - . ID=gene-AC00_RS19350;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AC00_RS19350;old_locus_tag=AC00_0959 NZ_JJLU01000033.1 Protein Homology CDS 2485 3153 . - 0 ID=cds-WP_000464491.1;Parent=gene-AC00_RS19350;Dbxref=GenBank:WP_000464491.1;Name=WP_000464491.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=AC00_RS19350;product=arginine ABC transporter permease ArtM;protein_id=WP_000464491.1;transl_table=11 NZ_JJLU01000033.1 RefSeq gene 3153 3869 . - . ID=gene-AC00_RS19345;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=AC00_RS19345;old_locus_tag=AC00_0960 NZ_JJLU01000033.1 Protein Homology CDS 3153 3869 . - 0 ID=cds-WP_032280614.1;Parent=gene-AC00_RS19345;Dbxref=GenBank:WP_032280614.1;Name=WP_032280614.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415383.1;locus_tag=AC00_RS19345;product=arginine ABC transporter permease ArtQ;protein_id=WP_032280614.1;transl_table=11 NZ_JJLU01000033.1 RefSeq gene 3876 4607 . - . ID=gene-AC00_RS19340;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=AC00_RS19340;old_locus_tag=AC00_0961 NZ_JJLU01000033.1 Protein Homology CDS 3876 4607 . - 0 ID=cds-WP_000756569.1;Parent=gene-AC00_RS19340;Dbxref=GenBank:WP_000756569.1;Name=WP_000756569.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415384.1;locus_tag=AC00_RS19340;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_000756569.1;transl_table=11 NZ_JJLU01000033.1 RefSeq gene 4625 5353 . - . ID=gene-AC00_RS19335;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=AC00_RS19335;old_locus_tag=AC00_0962 NZ_JJLU01000033.1 Protein Homology CDS 4625 5353 . - 0 ID=cds-WP_000027205.1;Parent=gene-AC00_RS19335;Dbxref=GenBank:WP_000027205.1;Name=WP_000027205.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=AC00_RS19335;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_000027205.1;transl_table=11 NZ_JJLU01000033.1 RefSeq gene 5571 6086 . - . ID=gene-AC00_RS19330;Name=ybjP;gbkey=Gene;gene=ybjP;gene_biotype=protein_coding;locus_tag=AC00_RS19330;old_locus_tag=AC00_0963 NZ_JJLU01000033.1 Protein Homology CDS 5571 6086 . - 0 ID=cds-WP_001270657.1;Parent=gene-AC00_RS19330;Dbxref=GenBank:WP_001270657.1;Name=WP_001270657.1;gbkey=CDS;gene=ybjP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308975.1;locus_tag=AC00_RS19330;product=lipoprotein;protein_id=WP_001270657.1;transl_table=11 NZ_JJLU01000033.1 RefSeq pseudogene 6710 7504 . + . ID=gene-AC00_RS19325;Name=AC00_RS19325;end_range=7504,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19325;old_locus_tag=AC00_0964;partial=true;pseudo=true NZ_JJLU01000033.1 Protein Homology CDS 6710 7504 . + 0 ID=cds-AC00_RS19325;Parent=gene-AC00_RS19325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=7504,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308976.1;locus_tag=AC00_RS19325;partial=true;product=pentapeptide repeat-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000033.1 RefSeq pseudogene 7536 7852 . + . ID=gene-AC00_RS0124065;Name=AC00_RS0124065;end_range=7852,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124065;partial=true;pseudo=true NZ_JJLU01000033.1 Protein Homology CDS 7536 7852 . + 0 ID=cds-AC00_RS0124065;Parent=gene-AC00_RS0124065;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=7852,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124065;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000034.1 1 11854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000034.1 RefSeq region 1 11854 . + . ID=NZ_JJLU01000034.1:1..11854;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000034.1 RefSeq gene 1 262 . + . ID=gene-AC00_RS27275;Name=AC00_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27275;old_locus_tag=AC00_0966;partial=true;start_range=.,1 NZ_JJLU01000034.1 Protein Homology CDS 1 262 . + 1 ID=cds-WP_000317723.1-2;Parent=gene-AC00_RS27275;Dbxref=GenBank:WP_000317723.1;Name=WP_000317723.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27275;partial=true;product=IS1 family transposase;protein_id=WP_000317723.1;start_range=.,1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 503 826 . + . ID=gene-AC00_RS19320;Name=ybjQ;gbkey=Gene;gene=ybjQ;gene_biotype=protein_coding;locus_tag=AC00_RS19320;old_locus_tag=AC00_0967 NZ_JJLU01000034.1 Protein Homology CDS 503 826 . + 0 ID=cds-WP_001160737.1;Parent=gene-AC00_RS19320;Dbxref=GenBank:WP_001160737.1;Name=WP_001160737.1;gbkey=CDS;gene=ybjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308979.1;locus_tag=AC00_RS19320;product=heavy metal-binding domain-containing protein;protein_id=WP_001160737.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 823 1653 . + . ID=gene-AC00_RS19315;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=AC00_RS19315;old_locus_tag=AC00_0968 NZ_JJLU01000034.1 Protein Homology CDS 823 1653 . + 0 ID=cds-WP_001255180.1;Parent=gene-AC00_RS19315;Dbxref=GenBank:WP_001255180.1;Name=WP_001255180.1;gbkey=CDS;gene=amiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415388.1;locus_tag=AC00_RS19315;product=N-acetylmuramoyl-L-alanine amidase AmiD;protein_id=WP_001255180.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 1650 2663 . - . ID=gene-AC00_RS19310;Name=ybjS;gbkey=Gene;gene=ybjS;gene_biotype=protein_coding;locus_tag=AC00_RS19310;old_locus_tag=AC00_0969 NZ_JJLU01000034.1 Protein Homology CDS 1650 2663 . - 0 ID=cds-WP_001338420.1;Parent=gene-AC00_RS19310;Dbxref=GenBank:WP_001338420.1;Name=WP_001338420.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;gene=ybjS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415389.2;locus_tag=AC00_RS19310;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001338420.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 2762 4192 . - . ID=gene-AC00_RS19305;Name=ybjT;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=AC00_RS19305;old_locus_tag=AC00_0970 NZ_JJLU01000034.1 Protein Homology CDS 2762 4192 . - 0 ID=cds-WP_032280619.1;Parent=gene-AC00_RS19305;Dbxref=GenBank:WP_032280619.1;Name=WP_032280619.1;gbkey=CDS;gene=ybjT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415390.4;locus_tag=AC00_RS19305;product=SDR family oxidoreductase;protein_id=WP_032280619.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 4203 5204 . - . ID=gene-AC00_RS19300;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=AC00_RS19300;old_locus_tag=AC00_0971 NZ_JJLU01000034.1 Protein Homology CDS 4203 5204 . - 0 ID=cds-WP_032280620.1;Parent=gene-AC00_RS19300;Dbxref=GenBank:WP_032280620.1;Name=WP_032280620.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415391.1;locus_tag=AC00_RS19300;product=low-specificity L-threonine aldolase;protein_id=WP_032280620.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 5241 6959 . - . ID=gene-AC00_RS19295;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=AC00_RS19295;old_locus_tag=AC00_0972 NZ_JJLU01000034.1 Protein Homology CDS 5241 6959 . - 0 ID=cds-WP_000815358.1;Parent=gene-AC00_RS19295;Dbxref=GenBank:WP_000815358.1;Name=WP_000815358.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308984.1;locus_tag=AC00_RS19295;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_000815358.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 7092 8060 . - . ID=gene-AC00_RS19290;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=AC00_RS19290;old_locus_tag=AC00_0973 NZ_JJLU01000034.1 Protein Homology CDS 7092 8060 . - 0 ID=cds-WP_021577184.1;Parent=gene-AC00_RS19290;Dbxref=GenBank:WP_021577184.1;Name=WP_021577184.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308985.1;locus_tag=AC00_RS19290;product=NADH oxidoreductase;protein_id=WP_021577184.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 8072 9724 . - . ID=gene-AC00_RS19285;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=AC00_RS19285;old_locus_tag=AC00_0974 NZ_JJLU01000034.1 Protein Homology CDS 8072 9724 . - 0 ID=cds-WP_032280623.1;Parent=gene-AC00_RS19285;Dbxref=GenBank:WP_032280623.1;Name=WP_032280623.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=AC00_RS19285;product=hydroxylamine reductase;protein_id=WP_032280623.1;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 9868 10767 . - . ID=gene-AC00_RS19280;Name=lysO;gbkey=Gene;gene=lysO;gene_biotype=protein_coding;locus_tag=AC00_RS19280;old_locus_tag=AC00_0975 NZ_JJLU01000034.1 Protein Homology CDS 9868 10767 . - 0 ID=cds-WP_032280625.1;Parent=gene-AC00_RS19280;Dbxref=GenBank:WP_032280625.1;Name=WP_032280625.1;gbkey=CDS;gene=lysO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308987.1;locus_tag=AC00_RS19280;product=L-lysine exporter LysO;protein_id=WP_032280625.1;transl_table=11 NZ_JJLU01000034.1 RefSeq pseudogene 11225 11566 . - . ID=gene-AC00_RS0124075;Name=AC00_RS0124075;end_range=11566,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124075;old_locus_tag=AC00_0976;partial=true;pseudo=true NZ_JJLU01000034.1 Protein Homology CDS 11225 11566 . - 0 ID=cds-AC00_RS0124075;Parent=gene-AC00_RS0124075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0015267,GO:0016020;end_range=11566,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308988.1;locus_tag=AC00_RS0124075;partial=true;product=aquaporin;pseudo=true;transl_table=11 NZ_JJLU01000034.1 RefSeq gene 11624 11854 . + . ID=gene-AC00_RS27285;Name=AC00_RS27285;end_range=11854,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27285;old_locus_tag=AC00_0977;partial=true NZ_JJLU01000034.1 Protein Homology CDS 11624 11854 . + 0 ID=cds-WP_001397795.1;Parent=gene-AC00_RS27285;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;end_range=11854,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27285;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;transl_table=11 ##sequence-region NZ_JJLU01000035.1 1 86846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000035.1 RefSeq region 1 86846 . + . ID=NZ_JJLU01000035.1:1..86846;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000035.1 RefSeq gene 1 269 . + . ID=gene-AC00_RS19275;Name=AC00_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS19275;old_locus_tag=AC00_0978;partial=true;start_range=.,1 NZ_JJLU01000035.1 Protein Homology CDS 1 269 . + 2 ID=cds-WP_000212398.1;Parent=gene-AC00_RS19275;Dbxref=GenBank:WP_000212398.1;Name=WP_000212398.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS19275;partial=true;product=IS1 family transposase;protein_id=WP_000212398.1;start_range=.,1;transl_table=11 NZ_JJLU01000035.1 RefSeq pseudogene 283 645 . - . ID=gene-AC00_RS19270;Name=AC00_RS19270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS19270;old_locus_tag=AC00_0979;partial=true;pseudo=true;start_range=.,283 NZ_JJLU01000035.1 Protein Homology CDS 283 645 . - 0 ID=cds-AC00_RS19270;Parent=gene-AC00_RS19270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0015267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308988.1;locus_tag=AC00_RS19270;partial=true;product=aquaporin;pseudo=true;start_range=.,283;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 1071 2729 . + . ID=gene-AC00_RS19265;Name=ybjD;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=AC00_RS19265;old_locus_tag=AC00_0980 NZ_JJLU01000035.1 Protein Homology CDS 1071 2729 . + 0 ID=cds-WP_032280628.1;Parent=gene-AC00_RS19265;Dbxref=GenBank:WP_032280628.1;Name=WP_032280628.1;gbkey=CDS;gene=ybjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=AC00_RS19265;product=ATP-dependent endonuclease;protein_id=WP_032280628.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 2726 3682 . - . ID=gene-AC00_RS19260;Name=ybjX;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=AC00_RS19260;old_locus_tag=AC00_0981 NZ_JJLU01000035.1 Protein Homology CDS 2726 3682 . - 0 ID=cds-WP_001355621.1;Parent=gene-AC00_RS19260;Dbxref=GenBank:WP_001355621.1;Name=WP_001355621.1;gbkey=CDS;gene=ybjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001322270.1;locus_tag=AC00_RS19260;product=VirK/YbjX family protein;protein_id=WP_001355621.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 3833 4948 . + . ID=gene-AC00_RS19255;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=AC00_RS19255;old_locus_tag=AC00_0982 NZ_JJLU01000035.1 Protein Homology CDS 3833 4948 . + 0 ID=cds-WP_000746460.1;Parent=gene-AC00_RS19255;Dbxref=GenBank:WP_000746460.1;Name=WP_000746460.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308991.2;locus_tag=AC00_RS19255;product=macrolide transporter subunit MacA;protein_id=WP_000746460.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 4945 6891 . + . ID=gene-AC00_RS19250;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=AC00_RS19250;old_locus_tag=AC00_0983 NZ_JJLU01000035.1 Protein Homology CDS 4945 6891 . + 0 ID=cds-WP_032280630.1;Parent=gene-AC00_RS19250;Dbxref=GenBank:WP_032280630.1;Name=WP_032280630.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308992.1;locus_tag=AC00_RS19250;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_032280630.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 6964 7188 . - . ID=gene-AC00_RS19245;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=AC00_RS19245;old_locus_tag=AC00_0984 NZ_JJLU01000035.1 Protein Homology CDS 6964 7188 . - 0 ID=cds-WP_000410785.1;Parent=gene-AC00_RS19245;Dbxref=GenBank:WP_000410785.1;Name=WP_000410785.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308993.1;locus_tag=AC00_RS19245;product=cold shock-like protein CspD;protein_id=WP_000410785.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 7338 7412 . + . ID=gene-AC00_RS31150;Name=yljB;gbkey=Gene;gene=yljB;gene_biotype=protein_coding;locus_tag=AC00_RS31150 NZ_JJLU01000035.1 Protein Homology CDS 7338 7412 . + 0 ID=cds-WP_001406719.1;Parent=gene-AC00_RS31150;Dbxref=GenBank:WP_001406719.1;Name=WP_001406719.1;gbkey=CDS;gene=yljB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051179.1;locus_tag=AC00_RS31150;product=protein YljB;protein_id=WP_001406719.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 7511 7831 . + . ID=gene-AC00_RS19240;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=AC00_RS19240;old_locus_tag=AC00_0985 NZ_JJLU01000035.1 Protein Homology CDS 7511 7831 . + 0 ID=cds-WP_000520781.1;Parent=gene-AC00_RS19240;Dbxref=GenBank:WP_000520781.1;Name=WP_000520781.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=AC00_RS19240;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_000520781.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 7862 10138 . + . ID=gene-AC00_RS19235;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=AC00_RS19235;old_locus_tag=AC00_0986 NZ_JJLU01000035.1 Protein Homology CDS 7862 10138 . + 0 ID=cds-WP_000934041.1;Parent=gene-AC00_RS19235;Dbxref=GenBank:WP_000934041.1;Name=WP_000934041.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=AC00_RS19235;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_000934041.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 10481 10568 . - . ID=gene-AC00_RS19230;Name=AC00_RS19230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS19230;old_locus_tag=AC00_0987 NZ_JJLU01000035.1 tRNAscan-SE tRNA 10481 10568 . - . ID=rna-AC00_RS19230;Parent=gene-AC00_RS19230;anticodon=(pos:complement(10532..10534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS19230;product=tRNA-Ser NZ_JJLU01000035.1 tRNAscan-SE exon 10481 10568 . - . ID=exon-AC00_RS19230-1;Parent=rna-AC00_RS19230;anticodon=(pos:complement(10532..10534));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS19230;product=tRNA-Ser NZ_JJLU01000035.1 RefSeq gene 10822 11040 . - . ID=gene-AC00_RS19225;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AC00_RS19225;old_locus_tag=AC00_0988 NZ_JJLU01000035.1 Protein Homology CDS 10822 11040 . - 0 ID=cds-WP_001040187.1;Parent=gene-AC00_RS19225;Dbxref=GenBank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=AC00_RS19225;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 11325 12029 . - . ID=gene-AC00_RS19220;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=AC00_RS19220;old_locus_tag=AC00_0989 NZ_JJLU01000035.1 Protein Homology CDS 11325 12029 . - 0 ID=cds-WP_032280632.1;Parent=gene-AC00_RS19220;Dbxref=GenBank:WP_032280632.1;Name=WP_032280632.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415405.1;locus_tag=AC00_RS19220;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_032280632.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 12071 13792 . - . ID=gene-AC00_RS19215;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AC00_RS19215;old_locus_tag=AC00_0990 NZ_JJLU01000035.1 Protein Homology CDS 12071 13792 . - 0 ID=cds-WP_032280633.1;Parent=gene-AC00_RS19215;Dbxref=GenBank:WP_032280633.1;Name=WP_032280633.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415406.1;locus_tag=AC00_RS19215;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_032280633.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 13793 15559 . - . ID=gene-AC00_RS19210;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AC00_RS19210;old_locus_tag=AC00_0991 NZ_JJLU01000035.1 Protein Homology CDS 13793 15559 . - 0 ID=cds-WP_032280634.1;Parent=gene-AC00_RS19210;Dbxref=GenBank:WP_032280634.1;Name=WP_032280634.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415407.1;locus_tag=AC00_RS19210;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_032280634.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 15682 16647 . - . ID=gene-AC00_RS19205;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=AC00_RS19205;old_locus_tag=AC00_0992 NZ_JJLU01000035.1 Protein Homology CDS 15682 16647 . - 0 ID=cds-WP_032280635.1;Parent=gene-AC00_RS19205;Dbxref=GenBank:WP_032280635.1;Name=WP_032280635.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309000.1;locus_tag=AC00_RS19205;product=thioredoxin-disulfide reductase;protein_id=WP_032280635.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 17192 17686 . + . ID=gene-AC00_RS19200;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=AC00_RS19200;old_locus_tag=AC00_0994 NZ_JJLU01000035.1 Protein Homology CDS 17192 17686 . + 0 ID=cds-WP_000228473.1;Parent=gene-AC00_RS19200;Dbxref=GenBank:WP_000228473.1;Name=WP_000228473.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=AC00_RS19200;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228473.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 17821 21927 . + . ID=gene-AC00_RS19195;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=AC00_RS19195;old_locus_tag=AC00_0995 NZ_JJLU01000035.1 Protein Homology CDS 17821 21927 . + 0 ID=cds-WP_032280636.1;Parent=gene-AC00_RS19195;Dbxref=GenBank:WP_032280636.1;Name=WP_032280636.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415410.1;locus_tag=AC00_RS19195;product=DNA translocase FtsK;protein_id=WP_032280636.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 22082 22693 . + . ID=gene-AC00_RS19190;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AC00_RS19190;old_locus_tag=AC00_0996 NZ_JJLU01000035.1 Protein Homology CDS 22082 22693 . + 0 ID=cds-WP_001295343.1;Parent=gene-AC00_RS19190;Dbxref=GenBank:WP_001295343.1;Name=WP_001295343.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=AC00_RS19190;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_001295343.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 22704 24047 . + . ID=gene-AC00_RS19185;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=AC00_RS19185;old_locus_tag=AC00_0997 NZ_JJLU01000035.1 Protein Homology CDS 22704 24047 . + 0 ID=cds-WP_000067755.1;Parent=gene-AC00_RS19185;Dbxref=GenBank:WP_000067755.1;Name=WP_000067755.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309004.1;locus_tag=AC00_RS19185;product=replication-associated recombination protein RarA;protein_id=WP_000067755.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 24138 25430 . + . ID=gene-AC00_RS19180;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AC00_RS19180;old_locus_tag=AC00_0998 NZ_JJLU01000035.1 Protein Homology CDS 24138 25430 . + 0 ID=cds-WP_000886683.1;Parent=gene-AC00_RS19180;Dbxref=GenBank:WP_000886683.1;Name=WP_000886683.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=AC00_RS19180;product=serine--tRNA ligase;protein_id=WP_000886683.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 25669 28113 . + . ID=gene-AC00_RS19175;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=AC00_RS19175;old_locus_tag=AC00_0999 NZ_JJLU01000035.1 Protein Homology CDS 25669 28113 . + 0 ID=cds-WP_000850303.1;Parent=gene-AC00_RS19175;Dbxref=GenBank:WP_000850303.1;Name=WP_000850303.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415414.4;locus_tag=AC00_RS19175;product=dimethylsulfoxide reductase subunit A;protein_id=WP_000850303.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 28124 28741 . + . ID=gene-AC00_RS19170;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=AC00_RS19170;old_locus_tag=AC00_1000 NZ_JJLU01000035.1 Protein Homology CDS 28124 28741 . + 0 ID=cds-WP_000213098.1;Parent=gene-AC00_RS19170;Dbxref=GenBank:WP_000213098.1;Name=WP_000213098.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AC00_RS19170;product=dimethylsulfoxide reductase iron-sulfur subunit DmsB;protein_id=WP_000213098.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 28743 29606 . + . ID=gene-AC00_RS19165;Name=dmsC;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=AC00_RS19165;old_locus_tag=AC00_1001 NZ_JJLU01000035.1 Protein Homology CDS 28743 29606 . + 0 ID=cds-WP_032280638.1;Parent=gene-AC00_RS19165;Dbxref=GenBank:WP_032280638.1;Name=WP_032280638.1;gbkey=CDS;gene=dmsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309008.1;locus_tag=AC00_RS19165;product=dimethyl sulfoxide reductase anchor subunit DmsC;protein_id=WP_032280638.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 29642 30268 . - . ID=gene-AC00_RS19160;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=AC00_RS19160;old_locus_tag=AC00_1002 NZ_JJLU01000035.1 Protein Homology CDS 29642 30268 . - 0 ID=cds-WP_000165876.1;Parent=gene-AC00_RS19160;Dbxref=GenBank:WP_000165876.1;Name=WP_000165876.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309009.1;locus_tag=AC00_RS19160;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_000165876.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 30583 31731 . + . ID=gene-AC00_RS19155;Name=ycaD;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=AC00_RS19155;old_locus_tag=AC00_1004 NZ_JJLU01000035.1 Protein Homology CDS 30583 31731 . + 0 ID=cds-WP_032280639.1;Parent=gene-AC00_RS19155;Dbxref=GenBank:WP_032280639.1;Name=WP_032280639.1;gbkey=CDS;gene=ycaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309010.1;locus_tag=AC00_RS19155;product=MFS transporter;protein_id=WP_032280639.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 31941 33371 . + . ID=gene-AC00_RS19150;Name=ycaM;gbkey=Gene;gene=ycaM;gene_biotype=protein_coding;locus_tag=AC00_RS19150;old_locus_tag=AC00_1005 NZ_JJLU01000035.1 Protein Homology CDS 31941 33371 . + 0 ID=cds-WP_000918506.1;Parent=gene-AC00_RS19150;Dbxref=GenBank:WP_000918506.1;Name=WP_000918506.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;gene=ycaM;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415419.2;locus_tag=AC00_RS19150;product=APC family permease;protein_id=WP_000918506.1;transl_table=11 NZ_JJLU01000035.1 RefSeq pseudogene 33372 33482 . - . ID=gene-AC00_RS29350;Name=AC00_RS29350;end_range=33482,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29350;partial=true;pseudo=true NZ_JJLU01000035.1 Protein Homology CDS 33372 33482 . - 0 ID=cds-AC00_RS29350;Parent=gene-AC00_RS29350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=33482,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415420.1;locus_tag=AC00_RS29350;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 33581 34321 . - . ID=gene-AC00_RS19145;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AC00_RS19145;old_locus_tag=AC00_1006 NZ_JJLU01000035.1 Protein Homology CDS 33581 34321 . - 0 ID=cds-WP_000111043.1;Parent=gene-AC00_RS19145;Dbxref=GenBank:WP_000111043.1;Name=WP_000111043.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=AC00_RS19145;product=pyruvate formate lyase 1-activating protein;protein_id=WP_000111043.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 34513 36795 . - . ID=gene-AC00_RS19140;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=AC00_RS19140;old_locus_tag=AC00_1007 NZ_JJLU01000035.1 Protein Homology CDS 34513 36795 . - 0 ID=cds-WP_001292812.1;Parent=gene-AC00_RS19140;Dbxref=GenBank:WP_001292812.1;Name=WP_001292812.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706821.1;locus_tag=AC00_RS19140;product=formate C-acetyltransferase;protein_id=WP_001292812.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 36850 37707 . - . ID=gene-AC00_RS30220;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=AC00_RS30220;old_locus_tag=AC00_1008 NZ_JJLU01000035.1 Protein Homology CDS 36850 37707 . - 0 ID=cds-WP_000642546.1;Parent=gene-AC00_RS30220;Dbxref=GenBank:WP_000642546.1;Name=WP_000642546.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309014.1;locus_tag=AC00_RS30220;product=formate transporter FocA;protein_id=WP_000642546.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 38113 39873 . - . ID=gene-AC00_RS19130;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=AC00_RS19130;old_locus_tag=AC00_1009 NZ_JJLU01000035.1 Protein Homology CDS 38113 39873 . - 0 ID=cds-WP_032280640.1;Parent=gene-AC00_RS19130;Dbxref=GenBank:WP_032280640.1;Name=WP_032280640.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415425.4;locus_tag=AC00_RS19130;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_032280640.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 40003 40695 . + . ID=gene-AC00_RS19125;Name=ycaP;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=AC00_RS19125;old_locus_tag=AC00_1010 NZ_JJLU01000035.1 Protein Homology CDS 40003 40695 . + 0 ID=cds-WP_000642852.1;Parent=gene-AC00_RS19125;Dbxref=GenBank:WP_000642852.1;Name=WP_000642852.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ycaP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=AC00_RS19125;product=DUF421 domain-containing protein;protein_id=WP_000642852.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 40894 41982 . + . ID=gene-AC00_RS19120;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AC00_RS19120;old_locus_tag=AC00_1012 NZ_JJLU01000035.1 Protein Homology CDS 40894 41982 . + 0 ID=cds-WP_000057149.1;Parent=gene-AC00_RS19120;Dbxref=GenBank:WP_000057149.1;Name=WP_000057149.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706825.1;locus_tag=AC00_RS19120;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_000057149.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 42053 43336 . + . ID=gene-AC00_RS19115;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AC00_RS19115;old_locus_tag=AC00_1013 NZ_JJLU01000035.1 Protein Homology CDS 42053 43336 . + 0 ID=cds-WP_032280641.1;Parent=gene-AC00_RS19115;Dbxref=GenBank:WP_032280641.1;Name=WP_032280641.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309018.1;locus_tag=AC00_RS19115;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_032280641.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 43505 44269 . + . ID=gene-AC00_RS19110;Name=ycaL;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=AC00_RS19110;old_locus_tag=AC00_1014 NZ_JJLU01000035.1 Protein Homology CDS 43505 44269 . + 0 ID=cds-WP_001295345.1;Parent=gene-AC00_RS19110;Dbxref=GenBank:WP_001295345.1;Name=WP_001295345.1;gbkey=CDS;gene=ycaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706828.2;locus_tag=AC00_RS19110;product=metallopeptidase YcaL;protein_id=WP_001295345.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 44442 45125 . + . ID=gene-AC00_RS19105;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AC00_RS19105;old_locus_tag=AC00_1015 NZ_JJLU01000035.1 Protein Homology CDS 44442 45125 . + 0 ID=cds-WP_000125016.1;Parent=gene-AC00_RS19105;Dbxref=GenBank:WP_000125016.1;Name=WP_000125016.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=AC00_RS19105;product=(d)CMP kinase;protein_id=WP_000125016.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 45236 46909 . + . ID=gene-AC00_RS19100;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AC00_RS19100;old_locus_tag=AC00_1016 NZ_JJLU01000035.1 Protein Homology CDS 45236 46909 . + 0 ID=cds-WP_000140327.1;Parent=gene-AC00_RS19100;Dbxref=GenBank:WP_000140327.1;Name=WP_000140327.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=AC00_RS19100;product=30S ribosomal protein S1;protein_id=WP_000140327.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 47069 47353 . + . ID=gene-AC00_RS19095;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AC00_RS19095;old_locus_tag=AC00_1017 NZ_JJLU01000035.1 Protein Homology CDS 47069 47353 . + 0 ID=cds-WP_000167336.1;Parent=gene-AC00_RS19095;Dbxref=GenBank:WP_000167336.1;Name=WP_000167336.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819309.1;locus_tag=AC00_RS19095;product=integration host factor subunit beta;protein_id=WP_000167336.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 47560 48174 . + . ID=gene-AC00_RS31695;Name=AC00_RS31695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31695;old_locus_tag=AC00_1018 NZ_JJLU01000035.1 Protein Homology CDS 47560 48174 . + 0 ID=cds-WP_375156536.1;Parent=gene-AC00_RS31695;Dbxref=GenBank:WP_375156536.1;Name=WP_375156536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000705694.1;locus_tag=AC00_RS31695;product=hypothetical protein;protein_id=WP_375156536.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 48089 49810 . + . ID=gene-AC00_RS0124085;Name=AC00_RS0124085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124085;old_locus_tag=AC00_1019 NZ_JJLU01000035.1 Protein Homology CDS 48089 49810 . + 0 ID=cds-WP_375156537.1;Parent=gene-AC00_RS0124085;Dbxref=GenBank:WP_375156537.1;Name=WP_375156537.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF008580.0;locus_tag=AC00_RS0124085;product=ComEC family protein;protein_id=WP_375156537.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 49847 51595 . + . ID=gene-AC00_RS19090;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AC00_RS19090;old_locus_tag=AC00_1020 NZ_JJLU01000035.1 Protein Homology CDS 49847 51595 . + 0 ID=cds-WP_000551270.1;Parent=gene-AC00_RS19090;Dbxref=GenBank:WP_000551270.1;Name=WP_000551270.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=AC00_RS19090;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_000551270.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 51592 52578 . + . ID=gene-AC00_RS19085;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AC00_RS19085;old_locus_tag=AC00_1021 NZ_JJLU01000035.1 Protein Homology CDS 51592 52578 . + 0 ID=cds-WP_000570541.1;Parent=gene-AC00_RS19085;Dbxref=GenBank:WP_000570541.1;Name=WP_000570541.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309025.1;locus_tag=AC00_RS19085;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_000570541.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 52615 53847 . + . ID=gene-AC00_RS19080;Name=ycaQ;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=AC00_RS19080;old_locus_tag=AC00_1022 NZ_JJLU01000035.1 Protein Homology CDS 52615 53847 . + 0 ID=cds-WP_000056535.1;Parent=gene-AC00_RS19080;Dbxref=GenBank:WP_000056535.1;Name=WP_000056535.1;gbkey=CDS;gene=ycaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415436.1;locus_tag=AC00_RS19080;product=crosslink repair DNA glycosylase YcaQ;protein_id=WP_000056535.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 53899 54081 . + . ID=gene-AC00_RS19075;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=AC00_RS19075;old_locus_tag=AC00_1023 NZ_JJLU01000035.1 Protein Homology CDS 53899 54081 . + 0 ID=cds-WP_000350058.1;Parent=gene-AC00_RS19075;Dbxref=GenBank:WP_000350058.1;Name=WP_000350058.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309027.1;locus_tag=AC00_RS19075;product=protein YcaR;protein_id=WP_000350058.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 54078 54824 . + . ID=gene-AC00_RS19070;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AC00_RS19070;old_locus_tag=AC00_1024 NZ_JJLU01000035.1 Protein Homology CDS 54078 54824 . + 0 ID=cds-WP_032280642.1;Parent=gene-AC00_RS19070;Dbxref=GenBank:WP_032280642.1;Name=WP_032280642.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309028.1;locus_tag=AC00_RS19070;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_032280642.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 54978 55871 . + . ID=gene-AC00_RS19065;Name=ycbJ;gbkey=Gene;gene=ycbJ;gene_biotype=protein_coding;locus_tag=AC00_RS19065;old_locus_tag=AC00_1025 NZ_JJLU01000035.1 Protein Homology CDS 54978 55871 . + 0 ID=cds-WP_032280644.1;Parent=gene-AC00_RS19065;Dbxref=GenBank:WP_032280644.1;Name=WP_032280644.1;gbkey=CDS;gene=ycbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=AC00_RS19065;product=YcbJ family phosphotransferase;protein_id=WP_032280644.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 55848 56627 . - . ID=gene-AC00_RS19060;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=AC00_RS19060;old_locus_tag=AC00_1026 NZ_JJLU01000035.1 Protein Homology CDS 55848 56627 . - 0 ID=cds-WP_032280645.1;Parent=gene-AC00_RS19060;Dbxref=GenBank:WP_032280645.1;Name=WP_032280645.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706838.2;locus_tag=AC00_RS19060;product=envelope biogenesis factor ElyC;protein_id=WP_032280645.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 56763 57548 . + . ID=gene-AC00_RS19055;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=AC00_RS19055;old_locus_tag=AC00_1027 NZ_JJLU01000035.1 Protein Homology CDS 56763 57548 . + 0 ID=cds-WP_032280646.1;Parent=gene-AC00_RS19055;Dbxref=GenBank:WP_032280646.1;Name=WP_032280646.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415441.1;locus_tag=AC00_RS19055;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_032280646.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 57545 58867 . + . ID=gene-AC00_RS19050;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=AC00_RS19050;old_locus_tag=AC00_1028 NZ_JJLU01000035.1 Protein Homology CDS 57545 58867 . + 0 ID=cds-WP_001288853.1;Parent=gene-AC00_RS19050;Dbxref=GenBank:WP_001288853.1;Name=WP_001288853.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=AC00_RS19050;product=chromosome partition protein MukF;protein_id=WP_001288853.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 58848 59552 . + . ID=gene-AC00_RS19045;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=AC00_RS19045;old_locus_tag=AC00_1029 NZ_JJLU01000035.1 Protein Homology CDS 58848 59552 . + 0 ID=cds-WP_001295347.1;Parent=gene-AC00_RS19045;Dbxref=GenBank:WP_001295347.1;Name=WP_001295347.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415443.2;locus_tag=AC00_RS19045;product=chromosome partition protein MukE;protein_id=WP_001295347.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 59552 64012 . + . ID=gene-AC00_RS19040;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AC00_RS19040;old_locus_tag=AC00_1030 NZ_JJLU01000035.1 Protein Homology CDS 59552 64012 . + 0 ID=cds-WP_032280647.1;Parent=gene-AC00_RS19040;Dbxref=GenBank:WP_032280647.1;Name=WP_032280647.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309034.1;locus_tag=AC00_RS19040;product=chromosome partition protein MukB;protein_id=WP_032280647.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 64273 66120 . + . ID=gene-AC00_RS19035;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=AC00_RS19035;old_locus_tag=AC00_1031 NZ_JJLU01000035.1 Protein Homology CDS 64273 66120 . + 0 ID=cds-WP_032280648.1;Parent=gene-AC00_RS19035;Dbxref=GenBank:WP_032280648.1;Name=WP_032280648.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415445.1;locus_tag=AC00_RS19035;product=L%2CD-transpeptidase;protein_id=WP_032280648.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 66301 66852 . + . ID=gene-AC00_RS19030;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=AC00_RS19030;old_locus_tag=AC00_1032 NZ_JJLU01000035.1 Protein Homology CDS 66301 66852 . + 0 ID=cds-WP_032280656.1;Parent=gene-AC00_RS19030;Dbxref=GenBank:WP_032280656.1;Name=WP_032280656.1;gbkey=CDS;gene=mepK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=AC00_RS19030;product=YcbK family protein;protein_id=WP_032280656.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 66876 67523 . + . ID=gene-AC00_RS19025;Name=gloC;gbkey=Gene;gene=gloC;gene_biotype=protein_coding;locus_tag=AC00_RS19025;old_locus_tag=AC00_1033 NZ_JJLU01000035.1 Protein Homology CDS 66876 67523 . + 0 ID=cds-WP_001109487.1;Parent=gene-AC00_RS19025;Dbxref=GenBank:WP_001109487.1;Name=WP_001109487.1;gbkey=CDS;gene=gloC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=AC00_RS19025;product=hydroxyacylglutathione hydrolase GloC;protein_id=WP_001109487.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 67573 68763 . - . ID=gene-AC00_RS19020;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=AC00_RS19020;old_locus_tag=AC00_1034 NZ_JJLU01000035.1 Protein Homology CDS 67573 68763 . - 0 ID=cds-WP_032280649.1;Parent=gene-AC00_RS19020;Dbxref=GenBank:WP_032280649.1;Name=WP_032280649.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=AC00_RS19020;product=aspartate transaminase;protein_id=WP_032280649.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 68948 70036 . - . ID=gene-AC00_RS19015;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=AC00_RS19015;old_locus_tag=AC00_1035 NZ_JJLU01000035.1 Protein Homology CDS 68948 70036 . - 0 ID=cds-WP_000977914.1;Parent=gene-AC00_RS19015;Dbxref=GenBank:WP_000977914.1;Name=WP_000977914.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309039.1;locus_tag=AC00_RS19015;product=porin OmpF;protein_id=WP_000977914.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 70638 72038 . - . ID=gene-AC00_RS19010;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=AC00_RS19010;old_locus_tag=AC00_1037 NZ_JJLU01000035.1 Protein Homology CDS 70638 72038 . - 0 ID=cds-WP_001382134.1;Parent=gene-AC00_RS19010;Dbxref=GenBank:WP_001382134.1;Name=WP_001382134.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=AC00_RS19010;product=asparagine--tRNA ligase;protein_id=WP_001382134.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 72207 73409 . - . ID=gene-AC00_RS19005;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=AC00_RS19005;old_locus_tag=AC00_1038 NZ_JJLU01000035.1 Protein Homology CDS 72207 73409 . - 0 ID=cds-WP_032280650.1;Parent=gene-AC00_RS19005;Dbxref=GenBank:WP_032280650.1;Name=WP_032280650.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=AC00_RS19005;product=nicotinate phosphoribosyltransferase;protein_id=WP_032280650.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 73675 76287 . + . ID=gene-AC00_RS19000;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AC00_RS19000;old_locus_tag=AC00_1040 NZ_JJLU01000035.1 Protein Homology CDS 73675 76287 . + 0 ID=cds-WP_023307830.1;Parent=gene-AC00_RS19000;Dbxref=GenBank:WP_023307830.1;Name=WP_023307830.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=AC00_RS19000;product=aminopeptidase N;protein_id=WP_023307830.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 76330 77097 . - . ID=gene-AC00_RS18995;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=AC00_RS18995;old_locus_tag=AC00_1041 NZ_JJLU01000035.1 Protein Homology CDS 76330 77097 . - 0 ID=cds-WP_001090506.1;Parent=gene-AC00_RS18995;Dbxref=GenBank:WP_001090506.1;Name=WP_001090506.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309043.1;locus_tag=AC00_RS18995;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_001090506.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 77094 77885 . - . ID=gene-AC00_RS18990;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=AC00_RS18990;old_locus_tag=AC00_1042 NZ_JJLU01000035.1 Protein Homology CDS 77094 77885 . - 0 ID=cds-WP_000235189.1;Parent=gene-AC00_RS18990;Dbxref=GenBank:WP_000235189.1;Name=WP_000235189.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415454.4;locus_tag=AC00_RS18990;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_000235189.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 77897 79042 . - . ID=gene-AC00_RS18985;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=AC00_RS18985;old_locus_tag=AC00_1043 NZ_JJLU01000035.1 Protein Homology CDS 77897 79042 . - 0 ID=cds-WP_032280651.1;Parent=gene-AC00_RS18985;Dbxref=GenBank:WP_032280651.1;Name=WP_032280651.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309045.1;locus_tag=AC00_RS18985;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_032280651.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 79039 79998 . - . ID=gene-AC00_RS18980;Name=ssuA;gbkey=Gene;gene=ssuA;gene_biotype=protein_coding;locus_tag=AC00_RS18980;old_locus_tag=AC00_1044 NZ_JJLU01000035.1 Protein Homology CDS 79039 79998 . - 0 ID=cds-WP_032280652.1;Parent=gene-AC00_RS18980;Dbxref=GenBank:WP_032280652.1;Name=WP_032280652.1;gbkey=CDS;gene=ssuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415456.4;locus_tag=AC00_RS18980;product=aliphatic sulfonate ABC transporter substrate-binding protein SsuA;protein_id=WP_032280652.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 79991 80566 . - . ID=gene-AC00_RS18975;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=AC00_RS18975;old_locus_tag=AC00_1045 NZ_JJLU01000035.1 Protein Homology CDS 79991 80566 . - 0 ID=cds-WP_001263920.1;Parent=gene-AC00_RS18975;Dbxref=GenBank:WP_001263920.1;Name=WP_001263920.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309047.1;locus_tag=AC00_RS18975;product=NADPH-dependent FMN reductase;protein_id=WP_001263920.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 80922 81461 . + . ID=gene-AC00_RS18970;Name=elfA;gbkey=Gene;gene=elfA;gene_biotype=protein_coding;locus_tag=AC00_RS18970;old_locus_tag=AC00_1046 NZ_JJLU01000035.1 Protein Homology CDS 80922 81461 . + 0 ID=cds-WP_000750296.1;Parent=gene-AC00_RS18970;Dbxref=GenBank:WP_000750296.1;Name=WP_000750296.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415458.2;locus_tag=AC00_RS18970;product=fimbrial protein;protein_id=WP_000750296.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 81544 82245 . + . ID=gene-AC00_RS18965;Name=elfD;gbkey=Gene;gene=elfD;gene_biotype=protein_coding;locus_tag=AC00_RS18965;old_locus_tag=AC00_1047 NZ_JJLU01000035.1 Protein Homology CDS 81544 82245 . + 0 ID=cds-WP_000845152.1;Parent=gene-AC00_RS18965;Dbxref=GenBank:WP_000845152.1;Name=WP_000845152.1;Ontology_term=GO:0043711,GO:0061077,GO:0030288;gbkey=CDS;gene=elfD;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=pilus organization|0043711||IEA,chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415459.1;locus_tag=AC00_RS18965;product=fimbrial biogenesis chaperone;protein_id=WP_000845152.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 82270 84870 . + . ID=gene-AC00_RS18960;Name=elfC;gbkey=Gene;gene=elfC;gene_biotype=protein_coding;locus_tag=AC00_RS18960;old_locus_tag=AC00_1048 NZ_JJLU01000035.1 Protein Homology CDS 82270 84870 . + 0 ID=cds-WP_050438634.1;Parent=gene-AC00_RS18960;Dbxref=GenBank:WP_050438634.1;Name=WP_050438634.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;gene=elfC;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415460.1;locus_tag=AC00_RS18960;product=fimbrial biogenesis usher protein;protein_id=WP_050438634.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 84861 85931 . + . ID=gene-AC00_RS18955;Name=elfG;gbkey=Gene;gene=elfG;gene_biotype=protein_coding;locus_tag=AC00_RS18955;old_locus_tag=AC00_1049 NZ_JJLU01000035.1 Protein Homology CDS 84861 85931 . + 0 ID=cds-WP_032280654.1;Parent=gene-AC00_RS18955;Dbxref=GenBank:WP_032280654.1;Name=WP_032280654.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=elfG;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415461.1;locus_tag=AC00_RS18955;product=fimbrial protein;protein_id=WP_032280654.1;transl_table=11 NZ_JJLU01000035.1 RefSeq gene 85943 86485 . + . ID=gene-AC00_RS18950;Name=ycbU;gbkey=Gene;gene=ycbU;gene_biotype=protein_coding;locus_tag=AC00_RS18950;old_locus_tag=AC00_1050 NZ_JJLU01000035.1 Protein Homology CDS 85943 86485 . + 0 ID=cds-WP_077757361.1;Parent=gene-AC00_RS18950;Dbxref=GenBank:WP_077757361.1;Name=WP_077757361.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbU;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415462.1;locus_tag=AC00_RS18950;product=fimbrial protein;protein_id=WP_077757361.1;transl_table=11 NZ_JJLU01000035.1 RefSeq pseudogene 86566 86846 . + . ID=gene-AC00_RS18945;Name=AC00_RS18945;end_range=86846,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS18945;old_locus_tag=AC00_1051;partial=true;pseudo=true NZ_JJLU01000035.1 Protein Homology CDS 86566 86846 . + 0 ID=cds-AC00_RS18945;Parent=gene-AC00_RS18945;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=86846,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS18945;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000036.1 1 47544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000036.1 RefSeq region 1 47544 . + . ID=NZ_JJLU01000036.1:1..47544;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000036.1 RefSeq gene 1 273 . + . ID=gene-AC00_RS26590;Name=AC00_RS26590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26590;old_locus_tag=AC00_1052;partial=true;start_range=.,1 NZ_JJLU01000036.1 Protein Homology CDS 1 273 . + 0 ID=cds-WP_000308288.1;Parent=gene-AC00_RS26590;Dbxref=GenBank:WP_000308288.1;Name=WP_000308288.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS26590;partial=true;product=IS1 family transposase;protein_id=WP_000308288.1;start_range=.,1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 283 747 . + . ID=gene-AC00_RS0124100;Name=ycbV;gbkey=Gene;gene=ycbV;gene_biotype=protein_coding;locus_tag=AC00_RS0124100;old_locus_tag=AC00_1053 NZ_JJLU01000036.1 Protein Homology CDS 283 747 . + 0 ID=cds-WP_050438635.1;Parent=gene-AC00_RS0124100;Dbxref=GenBank:WP_050438635.1;Name=WP_050438635.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ycbV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125854.1;locus_tag=AC00_RS0124100;product=fimbrial protein;protein_id=WP_050438635.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 761 1498 . + . ID=gene-AC00_RS18940;Name=ycbF;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=AC00_RS18940;old_locus_tag=AC00_1054 NZ_JJLU01000036.1 Protein Homology CDS 761 1498 . + 0 ID=cds-WP_160438344.1;Parent=gene-AC00_RS18940;Dbxref=GenBank:WP_160438344.1;Name=WP_160438344.1;gbkey=CDS;gene=ycbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706867.1;locus_tag=AC00_RS18940;product=fimbrial chaperone;protein_id=WP_160438344.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 1609 2619 . + . ID=gene-AC00_RS18935;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=AC00_RS18935;old_locus_tag=AC00_1055 NZ_JJLU01000036.1 Protein Homology CDS 1609 2619 . + 0 ID=cds-WP_001312721.1;Parent=gene-AC00_RS18935;Dbxref=GenBank:WP_001312721.1;Name=WP_001312721.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=AC00_RS18935;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001312721.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 2793 3335 . + . ID=gene-AC00_RS18930;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=AC00_RS18930;old_locus_tag=AC00_1056 NZ_JJLU01000036.1 Protein Homology CDS 2793 3335 . + 0 ID=cds-WP_001295353.1;Parent=gene-AC00_RS18930;Dbxref=GenBank:WP_001295353.1;Name=WP_001295353.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415466.4;locus_tag=AC00_RS18930;product=cell division protein ZapC;protein_id=WP_001295353.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 3332 4441 . - . ID=gene-AC00_RS18925;Name=ycbX;gbkey=Gene;gene=ycbX;gene_biotype=protein_coding;locus_tag=AC00_RS18925;old_locus_tag=AC00_1057 NZ_JJLU01000036.1 Protein Homology CDS 3332 4441 . - 0 ID=cds-WP_032280661.1;Parent=gene-AC00_RS18925;Dbxref=GenBank:WP_032280661.1;Name=WP_032280661.1;gbkey=CDS;gene=ycbX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415467.1;locus_tag=AC00_RS18925;product=6-N-hydroxylaminopurine resistance protein YcbX;protein_id=WP_032280661.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 4685 6793 . + . ID=gene-AC00_RS18920;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=AC00_RS18920;old_locus_tag=AC00_1058 NZ_JJLU01000036.1 Protein Homology CDS 4685 6793 . + 0 ID=cds-WP_032280662.1;Parent=gene-AC00_RS18920;Dbxref=GenBank:WP_032280662.1;Name=WP_032280662.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309059.1;locus_tag=AC00_RS18920;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_032280662.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 6805 8712 . + . ID=gene-AC00_RS18915;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=AC00_RS18915;old_locus_tag=AC00_1059 NZ_JJLU01000036.1 Protein Homology CDS 6805 8712 . + 0 ID=cds-WP_000053083.1;Parent=gene-AC00_RS18915;Dbxref=GenBank:WP_000053083.1;Name=WP_000053083.1;Ontology_term=GO:0005524;gbkey=CDS;gene=uup;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309060.1;locus_tag=AC00_RS18915;product=ABC transporter ATP-binding protein;protein_id=WP_000053083.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 8842 10095 . + . ID=gene-AC00_RS18910;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=AC00_RS18910;old_locus_tag=AC00_1060 NZ_JJLU01000036.1 Protein Homology CDS 8842 10095 . + 0 ID=cds-WP_032280663.1;Parent=gene-AC00_RS18910;Dbxref=GenBank:WP_032280663.1;Name=WP_032280663.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309061.1;locus_tag=AC00_RS18910;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_032280663.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 10100 11740 . + . ID=gene-AC00_RS18905;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=AC00_RS18905;old_locus_tag=AC00_1061 NZ_JJLU01000036.1 Protein Homology CDS 10100 11740 . + 0 ID=cds-WP_000445541.1;Parent=gene-AC00_RS18905;Dbxref=GenBank:WP_000445541.1;Name=WP_000445541.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706874.2;locus_tag=AC00_RS18905;product=intermembrane transport protein PqiB;protein_id=WP_000445541.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 11737 12300 . + . ID=gene-AC00_RS18900;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=AC00_RS18900;old_locus_tag=AC00_1062 NZ_JJLU01000036.1 Protein Homology CDS 11737 12300 . + 0 ID=cds-WP_000759110.1;Parent=gene-AC00_RS18900;Dbxref=GenBank:WP_000759110.1;Name=WP_000759110.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309063.2;locus_tag=AC00_RS18900;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_000759110.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 12556 12723 . + . ID=gene-AC00_RS0124105;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=AC00_RS0124105 NZ_JJLU01000036.1 Protein Homology CDS 12556 12723 . + 0 ID=cds-WP_000828648.1;Parent=gene-AC00_RS0124105;Dbxref=GenBank:WP_000828648.1;Name=WP_000828648.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=AC00_RS0124105;product=ribosome modulation factor;protein_id=WP_000828648.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 12793 13311 . - . ID=gene-AC00_RS18895;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=AC00_RS18895;old_locus_tag=AC00_1063 NZ_JJLU01000036.1 Protein Homology CDS 12793 13311 . - 0 ID=cds-WP_000227927.1;Parent=gene-AC00_RS18895;Dbxref=GenBank:WP_000227927.1;Name=WP_000227927.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=AC00_RS18895;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227927.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 13380 15140 . - . ID=gene-AC00_RS18890;Name=ycbZ;gbkey=Gene;gene=ycbZ;gene_biotype=protein_coding;locus_tag=AC00_RS18890;old_locus_tag=AC00_1064 NZ_JJLU01000036.1 Protein Homology CDS 13380 15140 . - 0 ID=cds-WP_032280665.1;Parent=gene-AC00_RS18890;Dbxref=GenBank:WP_032280665.1;Name=WP_032280665.1;gbkey=CDS;gene=ycbZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309066.1;locus_tag=AC00_RS18890;product=AAA family ATPase;protein_id=WP_032280665.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 15326 15778 . + . ID=gene-AC00_RS18885;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=AC00_RS18885;old_locus_tag=AC00_1065 NZ_JJLU01000036.1 Protein Homology CDS 15326 15778 . + 0 ID=cds-WP_000877161.1;Parent=gene-AC00_RS18885;Dbxref=GenBank:WP_000877161.1;Name=WP_000877161.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309067.1;locus_tag=AC00_RS18885;product=macrodomain Ter protein MatP;protein_id=WP_000877161.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 15854 16906 . - . ID=gene-AC00_RS18880;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=AC00_RS18880;old_locus_tag=AC00_1066 NZ_JJLU01000036.1 Protein Homology CDS 15854 16906 . - 0 ID=cds-WP_032280676.1;Parent=gene-AC00_RS18880;Dbxref=GenBank:WP_032280676.1;Name=WP_032280676.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706879.2;locus_tag=AC00_RS18880;product=porin OmpA;protein_id=WP_032280676.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 17263 17772 . - . ID=gene-AC00_RS18875;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=AC00_RS18875;old_locus_tag=AC00_1067 NZ_JJLU01000036.1 Protein Homology CDS 17263 17772 . - 0 ID=cds-WP_000288706.1;Parent=gene-AC00_RS18875;Dbxref=GenBank:WP_000288706.1;Name=WP_000288706.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309069.1;locus_tag=AC00_RS18875;product=SOS-induced cell division inhibitor SulA;protein_id=WP_000288706.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 17991 18620 . + . ID=gene-AC00_RS18870;Name=sxy;gbkey=Gene;gene=sxy;gene_biotype=protein_coding;locus_tag=AC00_RS18870;old_locus_tag=AC00_1068 NZ_JJLU01000036.1 Protein Homology CDS 17991 18620 . + 0 ID=cds-WP_000839153.1;Parent=gene-AC00_RS18870;Dbxref=GenBank:WP_000839153.1;Name=WP_000839153.1;gbkey=CDS;gene=sxy;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415479.1;locus_tag=AC00_RS18870;product=CRP-S regulon transcriptional coactivator Sxy;protein_id=WP_000839153.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 18583 20745 . - . ID=gene-AC00_RS18865;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=AC00_RS18865;old_locus_tag=AC00_1069 NZ_JJLU01000036.1 Protein Homology CDS 18583 20745 . - 0 ID=cds-WP_136747830.1;Parent=gene-AC00_RS18865;Dbxref=GenBank:WP_136747830.1;Name=WP_136747830.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309071.3;locus_tag=AC00_RS18865;product=YccS family putative transporter;protein_id=WP_136747830.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 20755 21201 . - . ID=gene-AC00_RS18860;Name=yccF;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=AC00_RS18860;old_locus_tag=AC00_1070 NZ_JJLU01000036.1 Protein Homology CDS 20755 21201 . - 0 ID=cds-WP_001261235.1;Parent=gene-AC00_RS18860;Dbxref=GenBank:WP_001261235.1;Name=WP_001261235.1;gbkey=CDS;gene=yccF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=AC00_RS18860;product=YccF domain-containing protein;protein_id=WP_001261235.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 21324 23378 . + . ID=gene-AC00_RS18855;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=AC00_RS18855;old_locus_tag=AC00_1071 NZ_JJLU01000036.1 Protein Homology CDS 21324 23378 . + 0 ID=cds-WP_000420536.1;Parent=gene-AC00_RS18855;Dbxref=GenBank:WP_000420536.1;Name=WP_000420536.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=AC00_RS18855;product=DNA helicase IV;protein_id=WP_000420536.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 23410 23868 . - . ID=gene-AC00_RS18850;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=AC00_RS18850;old_locus_tag=AC00_1072 NZ_JJLU01000036.1 Protein Homology CDS 23410 23868 . - 0 ID=cds-WP_032280666.1;Parent=gene-AC00_RS18850;Dbxref=GenBank:WP_032280666.1;Name=WP_032280666.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=AC00_RS18850;product=methylglyoxal synthase;protein_id=WP_032280666.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 23964 24626 . - . ID=gene-AC00_RS18845;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;locus_tag=AC00_RS18845;old_locus_tag=AC00_1073 NZ_JJLU01000036.1 Protein Homology CDS 23964 24626 . - 0 ID=cds-WP_000847791.1;Parent=gene-AC00_RS18845;Dbxref=GenBank:WP_000847791.1;Name=WP_000847791.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309075.1;locus_tag=AC00_RS18845;product=DUF2057 family protein;protein_id=WP_000847791.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 24799 25212 . + . ID=gene-AC00_RS18835;Name=yccU;gbkey=Gene;gene=yccU;gene_biotype=protein_coding;locus_tag=AC00_RS18835;old_locus_tag=AC00_1075 NZ_JJLU01000036.1 Protein Homology CDS 24799 25212 . + 0 ID=cds-WP_000665217.1;Parent=gene-AC00_RS18835;Dbxref=GenBank:WP_000665217.1;Name=WP_000665217.1;Ontology_term=GO:0120225;gbkey=CDS;gene=yccU;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=AC00_RS18835;product=CoA-binding protein;protein_id=WP_000665217.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 25257 25574 . - . ID=gene-AC00_RS18830;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=AC00_RS18830;old_locus_tag=AC00_1076 NZ_JJLU01000036.1 Protein Homology CDS 25257 25574 . - 0 ID=cds-WP_001295356.1;Parent=gene-AC00_RS18830;Dbxref=GenBank:WP_001295356.1;Name=WP_001295356.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=AC00_RS18830;product=heat shock protein HspQ;protein_id=WP_001295356.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 25632 26822 . - . ID=gene-AC00_RS18825;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=AC00_RS18825;old_locus_tag=AC00_1077 NZ_JJLU01000036.1 Protein Homology CDS 25632 26822 . - 0 ID=cds-WP_032280667.1;Parent=gene-AC00_RS18825;Dbxref=GenBank:WP_032280667.1;Name=WP_032280667.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=AC00_RS18825;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_032280667.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 26917 27195 . + . ID=gene-AC00_RS18820;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=AC00_RS18820;old_locus_tag=AC00_1078 NZ_JJLU01000036.1 Protein Homology CDS 26917 27195 . + 0 ID=cds-WP_032280668.1;Parent=gene-AC00_RS18820;Dbxref=GenBank:WP_032280668.1;Name=WP_032280668.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309079.1;locus_tag=AC00_RS18820;product=acylphosphatase;protein_id=WP_032280668.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 27192 27521 . - . ID=gene-AC00_RS18815;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=AC00_RS18815;old_locus_tag=AC00_1079 NZ_JJLU01000036.1 Protein Homology CDS 27192 27521 . - 0 ID=cds-WP_000904442.1;Parent=gene-AC00_RS18815;Dbxref=GenBank:WP_000904442.1;Name=WP_000904442.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=AC00_RS18815;product=sulfurtransferase TusE;protein_id=WP_000904442.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 27612 28271 . - . ID=gene-AC00_RS18810;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=AC00_RS18810;old_locus_tag=AC00_1080 NZ_JJLU01000036.1 Protein Homology CDS 27612 28271 . - 0 ID=cds-WP_000375136.1;Parent=gene-AC00_RS18810;Dbxref=GenBank:WP_000375136.1;Name=WP_000375136.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=AC00_RS18810;product=FtsH protease modulator YccA;protein_id=WP_000375136.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 28478 28565 . - . ID=gene-AC00_RS18805;Name=AC00_RS18805;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS18805;old_locus_tag=AC00_1081 NZ_JJLU01000036.1 tRNAscan-SE tRNA 28478 28565 . - . ID=rna-AC00_RS18805;Parent=gene-AC00_RS18805;anticodon=(pos:complement(28529..28531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS18805;product=tRNA-Ser NZ_JJLU01000036.1 tRNAscan-SE exon 28478 28565 . - . ID=exon-AC00_RS18805-1;Parent=rna-AC00_RS18805;anticodon=(pos:complement(28529..28531));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS18805;product=tRNA-Ser NZ_JJLU01000036.1 RefSeq gene 28991 30109 . + . ID=gene-AC00_RS18800;Name=hyaA;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=AC00_RS18800;old_locus_tag=AC00_1083 NZ_JJLU01000036.1 Protein Homology CDS 28991 30109 . + 0 ID=cds-WP_032280669.1;Parent=gene-AC00_RS18800;Dbxref=GenBank:WP_032280669.1;Name=WP_032280669.1;gbkey=CDS;gene=hyaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415491.1;locus_tag=AC00_RS18800;product=hydrogenase 1 small subunit;protein_id=WP_032280669.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 30106 31899 . + . ID=gene-AC00_RS18795;Name=hyaB;gbkey=Gene;gene=hyaB;gene_biotype=protein_coding;locus_tag=AC00_RS18795;old_locus_tag=AC00_1084 NZ_JJLU01000036.1 Protein Homology CDS 30106 31899 . + 0 ID=cds-WP_000107391.1;Parent=gene-AC00_RS18795;Dbxref=GenBank:WP_000107391.1;Name=WP_000107391.1;gbkey=CDS;gene=hyaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309156.1;locus_tag=AC00_RS18795;product=Ni/Fe-hydrogenase large subunit;protein_id=WP_000107391.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 31918 32625 . + . ID=gene-AC00_RS18790;Name=hyaC;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=AC00_RS18790;old_locus_tag=AC00_1085 NZ_JJLU01000036.1 Protein Homology CDS 31918 32625 . + 0 ID=cds-WP_001186424.1;Parent=gene-AC00_RS18790;Dbxref=GenBank:WP_001186424.1;Name=WP_001186424.1;gbkey=CDS;gene=hyaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309157.1;locus_tag=AC00_RS18790;product=Ni/Fe-hydrogenase b-type cytochrome subunit;protein_id=WP_001186424.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 32622 33209 . + . ID=gene-AC00_RS18785;Name=hyaD;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=AC00_RS18785;old_locus_tag=AC00_1086 NZ_JJLU01000036.1 Protein Homology CDS 32622 33209 . + 0 ID=cds-WP_000003670.1;Parent=gene-AC00_RS18785;Dbxref=GenBank:WP_000003670.1;Name=WP_000003670.1;gbkey=CDS;gene=hyaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309158.1;locus_tag=AC00_RS18785;product=hydrogenase 1 maturation protease;protein_id=WP_000003670.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 33206 33604 . + . ID=gene-AC00_RS18780;Name=hyaE;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=AC00_RS18780;old_locus_tag=AC00_1087 NZ_JJLU01000036.1 Protein Homology CDS 33206 33604 . + 0 ID=cds-WP_000063969.1;Parent=gene-AC00_RS18780;Dbxref=GenBank:WP_000063969.1;Name=WP_000063969.1;gbkey=CDS;gene=hyaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309159.1;locus_tag=AC00_RS18780;product=hydrogenase-1 operon protein HyaE;protein_id=WP_000063969.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 33601 34458 . + . ID=gene-AC00_RS18775;Name=hyaF;gbkey=Gene;gene=hyaF;gene_biotype=protein_coding;locus_tag=AC00_RS18775;old_locus_tag=AC00_1088 NZ_JJLU01000036.1 Protein Homology CDS 33601 34458 . + 0 ID=cds-WP_000004885.1;Parent=gene-AC00_RS18775;Dbxref=GenBank:WP_000004885.1;Name=WP_000004885.1;gbkey=CDS;gene=hyaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415496.1;locus_tag=AC00_RS18775;product=hydrogenase expression/formation protein;protein_id=WP_000004885.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 34592 36136 . + . ID=gene-AC00_RS18770;Name=appC;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=AC00_RS18770;old_locus_tag=AC00_1089 NZ_JJLU01000036.1 Protein Homology CDS 34592 36136 . + 0 ID=cds-WP_000263563.1;Parent=gene-AC00_RS18770;Dbxref=GenBank:WP_000263563.1;Name=WP_000263563.1;gbkey=CDS;gene=appC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706901.2;locus_tag=AC00_RS18770;product=cytochrome bd-II oxidase subunit 1;protein_id=WP_000263563.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 36148 37284 . + . ID=gene-AC00_RS18765;Name=appB;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=AC00_RS18765;old_locus_tag=AC00_1090 NZ_JJLU01000036.1 Protein Homology CDS 36148 37284 . + 0 ID=cds-WP_000460777.1;Parent=gene-AC00_RS18765;Dbxref=GenBank:WP_000460777.1;Name=WP_000460777.1;gbkey=CDS;gene=appB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309162.1;locus_tag=AC00_RS18765;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_000460777.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 37297 37389 . + . ID=gene-AC00_RS0124115;Name=cbdX;gbkey=Gene;gene=cbdX;gene_biotype=protein_coding;locus_tag=AC00_RS0124115 NZ_JJLU01000036.1 Protein Homology CDS 37297 37389 . + 0 ID=cds-WP_000270305.1;Parent=gene-AC00_RS0124115;Dbxref=GenBank:WP_000270305.1;Name=WP_000270305.1;gbkey=CDS;gene=cbdX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165313.1;locus_tag=AC00_RS0124115;product=cytochrome bd-II oxidase subunit CbdX;protein_id=WP_000270305.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 37469 38767 . + . ID=gene-AC00_RS18760;Name=appA;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=AC00_RS18760;old_locus_tag=AC00_1091 NZ_JJLU01000036.1 Protein Homology CDS 37469 38767 . + 0 ID=cds-WP_032280679.1;Parent=gene-AC00_RS18760;Dbxref=GenBank:WP_032280679.1;Name=WP_032280679.1;gbkey=CDS;gene=appA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415500.1;locus_tag=AC00_RS18760;product=bifunctional acid phosphatase/4-phytase;protein_id=WP_032280679.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 38887 41067 . - . ID=gene-AC00_RS18755;Name=etk;gbkey=Gene;gene=etk;gene_biotype=protein_coding;locus_tag=AC00_RS18755;old_locus_tag=AC00_1092 NZ_JJLU01000036.1 Protein Homology CDS 38887 41067 . - 0 ID=cds-WP_032280671.1;Parent=gene-AC00_RS18755;Dbxref=GenBank:WP_032280671.1;Name=WP_032280671.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=etk;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309164.1;locus_tag=AC00_RS18755;product=tyrosine-protein kinase;protein_id=WP_032280671.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 41087 41533 . - . ID=gene-AC00_RS18750;Name=etp;gbkey=Gene;gene=etp;gene_biotype=protein_coding;gene_synonym=yccY;locus_tag=AC00_RS18750;old_locus_tag=AC00_1093 NZ_JJLU01000036.1 Protein Homology CDS 41087 41533 . - 0 ID=cds-WP_000057871.1;Parent=gene-AC00_RS18750;Dbxref=GenBank:WP_000057871.1;Name=WP_000057871.1;gbkey=CDS;gene=etp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309165.2;locus_tag=AC00_RS18750;product=protein-tyrosine-phosphatase Etp;protein_id=WP_000057871.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 41521 42660 . - . ID=gene-AC00_RS18745;Name=gfcE;gbkey=Gene;gene=gfcE;gene_biotype=protein_coding;locus_tag=AC00_RS18745;old_locus_tag=AC00_1094 NZ_JJLU01000036.1 Protein Homology CDS 41521 42660 . - 0 ID=cds-WP_032280672.1;Parent=gene-AC00_RS18745;Dbxref=GenBank:WP_032280672.1;Name=WP_032280672.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;gene=gfcE;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309166.1;locus_tag=AC00_RS18745;product=polysaccharide export protein;protein_id=WP_032280672.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 42706 44802 . - . ID=gene-AC00_RS18740;Name=gfcD;gbkey=Gene;gene=gfcD;gene_biotype=protein_coding;locus_tag=AC00_RS18740;old_locus_tag=AC00_1095 NZ_JJLU01000036.1 Protein Homology CDS 42706 44802 . - 0 ID=cds-WP_032280673.1;Parent=gene-AC00_RS18740;Dbxref=GenBank:WP_032280673.1;Name=WP_032280673.1;gbkey=CDS;gene=gfcD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309167.1;locus_tag=AC00_RS18740;product=YjbH domain-containing protein;protein_id=WP_032280673.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 44802 45548 . - . ID=gene-AC00_RS18735;Name=gfcC;gbkey=Gene;gene=gfcC;gene_biotype=protein_coding;locus_tag=AC00_RS18735;old_locus_tag=AC00_1096 NZ_JJLU01000036.1 Protein Homology CDS 44802 45548 . - 0 ID=cds-WP_032280674.1;Parent=gene-AC00_RS18735;Dbxref=GenBank:WP_032280674.1;Name=WP_032280674.1;gbkey=CDS;gene=gfcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309168.1;locus_tag=AC00_RS18735;product=capsule biosynthesis GfcC family protein;protein_id=WP_032280674.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 45545 46189 . - . ID=gene-AC00_RS18730;Name=gfcB;gbkey=Gene;gene=gfcB;gene_biotype=protein_coding;locus_tag=AC00_RS18730;old_locus_tag=AC00_1097 NZ_JJLU01000036.1 Protein Homology CDS 45545 46189 . - 0 ID=cds-WP_032280675.1;Parent=gene-AC00_RS18730;Dbxref=GenBank:WP_032280675.1;Name=WP_032280675.1;gbkey=CDS;gene=gfcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309169.1;locus_tag=AC00_RS18730;product=lipoprotein GfcB;protein_id=WP_032280675.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 46296 46601 . - . ID=gene-AC00_RS18725;Name=AC00_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18725;old_locus_tag=AC00_1098 NZ_JJLU01000036.1 Protein Homology CDS 46296 46601 . - 0 ID=cds-WP_001299283.1;Parent=gene-AC00_RS18725;Dbxref=GenBank:WP_001299283.1;Name=WP_001299283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309170.2;locus_tag=AC00_RS18725;product=threonine-rich inner membrane protein GfcA;protein_id=WP_001299283.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 47042 47254 . - . ID=gene-AC00_RS18720;Name=cspH;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=AC00_RS18720;old_locus_tag=AC00_1099 NZ_JJLU01000036.1 Protein Homology CDS 47042 47254 . - 0 ID=cds-WP_000087763.1;Parent=gene-AC00_RS18720;Dbxref=GenBank:WP_000087763.1;Name=WP_000087763.1;gbkey=CDS;gene=cspH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415509.1;locus_tag=AC00_RS18720;product=cold shock-like protein CspH;protein_id=WP_000087763.1;transl_table=11 NZ_JJLU01000036.1 RefSeq gene 47331 47544 . - . ID=gene-AC00_RS18715;Name=AC00_RS18715;end_range=47544,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18715;old_locus_tag=AC00_1100;partial=true NZ_JJLU01000036.1 Protein Homology CDS 47331 47544 . - 1 ID=cds-WP_000327107.1;Parent=gene-AC00_RS18715;Dbxref=GenBank:WP_000327107.1;Name=WP_000327107.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=47544,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS18715;partial=true;product=IS1 family transposase;protein_id=WP_000327107.1;transl_table=11 ##sequence-region NZ_JJLU01000037.1 1 14812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000037.1 RefSeq region 1 14812 . + . ID=NZ_JJLU01000037.1:1..14812;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000037.1 RefSeq gene 1 239 . - . ID=gene-AC00_RS0124120;Name=AC00_RS0124120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124120;old_locus_tag=AC00_1101;partial=true;start_range=.,1 NZ_JJLU01000037.1 Protein Homology CDS 1 239 . - 0 ID=cds-WP_000179207.1-2;Parent=gene-AC00_RS0124120;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124120;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;start_range=.,1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 528 740 . + . ID=gene-AC00_RS18710;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;locus_tag=AC00_RS18710;old_locus_tag=AC00_1102 NZ_JJLU01000037.1 Protein Homology CDS 528 740 . + 0 ID=cds-WP_000066490.1;Parent=gene-AC00_RS18710;Dbxref=GenBank:WP_000066490.1;Name=WP_000066490.1;gbkey=CDS;gene=cspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309172.1;locus_tag=AC00_RS18710;product=cold shock protein CspG;protein_id=WP_000066490.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 751 939 . + . ID=gene-AC00_RS27310;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=AC00_RS27310 NZ_JJLU01000037.1 Protein Homology CDS 751 939 . + 0 ID=cds-WP_071524879.1;Parent=gene-AC00_RS27310;Dbxref=GenBank:WP_071524879.1;Name=WP_071524879.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518761.1;locus_tag=AC00_RS27310;product=cold-shock protein;protein_id=WP_071524879.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 914 1144 . + . ID=gene-AC00_RS0124125;Name=ymcE;gbkey=Gene;gene=ymcE;gene_biotype=protein_coding;locus_tag=AC00_RS0124125 NZ_JJLU01000037.1 Protein Homology CDS 914 1144 . + 0 ID=cds-WP_001323678.1;Parent=gene-AC00_RS0124125;Dbxref=GenBank:WP_001323678.1;Name=WP_001323678.1;gbkey=CDS;gene=ymcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706913.1;locus_tag=AC00_RS0124125;product=protein YmcE;protein_id=WP_001323678.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 1134 1307 . + . ID=gene-AC00_RS18705;Name=gnsA;gbkey=Gene;gene=gnsA;gene_biotype=protein_coding;locus_tag=AC00_RS18705;old_locus_tag=AC00_1103 NZ_JJLU01000037.1 Protein Homology CDS 1134 1307 . + 0 ID=cds-WP_001019197.1;Parent=gene-AC00_RS18705;Dbxref=GenBank:WP_001019197.1;Name=WP_001019197.1;gbkey=CDS;gene=gnsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588446.1;locus_tag=AC00_RS18705;product=GnsA/GnsB family addiction module toxin;protein_id=WP_001019197.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 1355 2428 . - . ID=gene-AC00_RS18700;Name=yccM;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=AC00_RS18700;old_locus_tag=AC00_1104 NZ_JJLU01000037.1 Protein Homology CDS 1355 2428 . - 0 ID=cds-WP_032280681.1;Parent=gene-AC00_RS18700;Dbxref=GenBank:WP_032280681.1;Name=WP_032280681.1;Ontology_term=GO:0051539;gbkey=CDS;gene=yccM;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706915.2;locus_tag=AC00_RS18700;product=4Fe-4S binding protein;protein_id=WP_032280681.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 2500 5244 . - . ID=gene-AC00_RS18695;Name=torS;gbkey=Gene;gene=torS;gene_biotype=protein_coding;locus_tag=AC00_RS18695;old_locus_tag=AC00_1105 NZ_JJLU01000037.1 Protein Homology CDS 2500 5244 . - 0 ID=cds-WP_071999224.1;Parent=gene-AC00_RS18695;Dbxref=GenBank:WP_071999224.1;Name=WP_071999224.1;gbkey=CDS;gene=torS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415513.2;locus_tag=AC00_RS18695;product=TMAO reductase system sensor histidine kinase/response regulator TorS;protein_id=WP_071999224.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 5327 6355 . + . ID=gene-AC00_RS18690;Name=torT;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=AC00_RS18690;old_locus_tag=AC00_1106 NZ_JJLU01000037.1 Protein Homology CDS 5327 6355 . + 0 ID=cds-WP_032280684.1;Parent=gene-AC00_RS18690;Dbxref=GenBank:WP_032280684.1;Name=WP_032280684.1;gbkey=CDS;gene=torT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309176.1;locus_tag=AC00_RS18690;product=TMAO reductase system periplasmic protein TorT;protein_id=WP_032280684.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 6328 7020 . - . ID=gene-AC00_RS18685;Name=torR;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=AC00_RS18685;old_locus_tag=AC00_1107 NZ_JJLU01000037.1 Protein Homology CDS 6328 7020 . - 0 ID=cds-WP_001120116.1;Parent=gene-AC00_RS18685;Dbxref=GenBank:WP_001120116.1;Name=WP_001120116.1;gbkey=CDS;gene=torR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309177.1;locus_tag=AC00_RS18685;product=two-component system response regulator TorR;protein_id=WP_001120116.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 7150 8322 . + . ID=gene-AC00_RS18680;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=AC00_RS18680;old_locus_tag=AC00_1108 NZ_JJLU01000037.1 Protein Homology CDS 7150 8322 . + 0 ID=cds-WP_032280686.1;Parent=gene-AC00_RS18680;Dbxref=GenBank:WP_032280686.1;Name=WP_032280686.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;gene=torC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309178.1;locus_tag=AC00_RS18680;product=pentaheme c-type cytochrome TorC;protein_id=WP_032280686.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 8322 10868 . + . ID=gene-AC00_RS18675;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=AC00_RS18675;old_locus_tag=AC00_1109 NZ_JJLU01000037.1 Protein Homology CDS 8322 10868 . + 0 ID=cds-WP_032280687.1;Parent=gene-AC00_RS18675;Dbxref=GenBank:WP_032280687.1;Name=WP_032280687.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309179.1;locus_tag=AC00_RS18675;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_032280687.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 10865 11464 . + . ID=gene-AC00_RS18670;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=AC00_RS18670;old_locus_tag=AC00_1110 NZ_JJLU01000037.1 Protein Homology CDS 10865 11464 . + 0 ID=cds-WP_032288181.1;Parent=gene-AC00_RS18670;Dbxref=GenBank:WP_032288181.1;Name=WP_032288181.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309180.1;locus_tag=AC00_RS18670;product=molecular chaperone TorD;protein_id=WP_032288181.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 11557 11862 . - . ID=gene-AC00_RS18665;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=AC00_RS18665;old_locus_tag=AC00_1111 NZ_JJLU01000037.1 Protein Homology CDS 11557 11862 . - 0 ID=cds-WP_000024560.1;Parent=gene-AC00_RS18665;Dbxref=GenBank:WP_000024560.1;Name=WP_000024560.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309181.1;locus_tag=AC00_RS18665;product=chaperone modulator CbpM;protein_id=WP_000024560.1;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 11862 12782 . - . ID=gene-AC00_RS18660;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=AC00_RS18660;old_locus_tag=AC00_1112 NZ_JJLU01000037.1 Protein Homology CDS 11862 12782 . - 0 ID=cds-WP_000420621.1;Parent=gene-AC00_RS18660;Dbxref=GenBank:WP_000420621.1;Name=WP_000420621.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415520.1;locus_tag=AC00_RS18660;product=curved DNA-binding protein;protein_id=WP_000420621.1;transl_table=11 NZ_JJLU01000037.1 RefSeq pseudogene 13043 14282 . + . ID=gene-AC00_RS0124130;Name=yccE;gbkey=Gene;gene=yccE;gene_biotype=pseudogene;locus_tag=AC00_RS0124130;pseudo=true NZ_JJLU01000037.1 Protein Homology CDS 13043 14282 . + 0 ID=cds-AC00_RS0124130;Parent=gene-AC00_RS0124130;Note=frameshifted;gbkey=CDS;gene=yccE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706924.1;locus_tag=AC00_RS0124130;product=YccE family protein;pseudo=true;transl_table=11 NZ_JJLU01000037.1 RefSeq gene 14542 14812 . + . ID=gene-AC00_RS27315;Name=AC00_RS27315;end_range=14812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27315;old_locus_tag=AC00_1114;partial=true NZ_JJLU01000037.1 Protein Homology CDS 14542 14812 . + 0 ID=cds-WP_000179209.1;Parent=gene-AC00_RS27315;Dbxref=GenBank:WP_000179209.1;Name=WP_000179209.1;end_range=14812,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27315;partial=true;product=IS1-like element transposase;protein_id=WP_000179209.1;transl_table=11 ##sequence-region NZ_JJLU01000038.1 1 31453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000038.1 RefSeq region 1 31453 . + . ID=NZ_JJLU01000038.1:1..31453;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000038.1 RefSeq pseudogene 1 306 . + . ID=gene-AC00_RS18655;Name=AC00_RS18655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS18655;old_locus_tag=AC00_1115;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000038.1 Protein Homology CDS 1 306 . + 0 ID=cds-AC00_RS18655;Parent=gene-AC00_RS18655;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS18655;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 437 1678 . + . ID=gene-AC00_RS18650;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=AC00_RS18650;old_locus_tag=AC00_1116 NZ_JJLU01000038.1 Protein Homology CDS 437 1678 . + 0 ID=cds-WP_032280690.1;Parent=gene-AC00_RS18650;Dbxref=GenBank:WP_032280690.1;Name=WP_032280690.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415522.1;locus_tag=AC00_RS18650;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_032280690.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 1716 1943 . - . ID=gene-AC00_RS18645;Name=yccJ;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=AC00_RS18645;old_locus_tag=AC00_1117 NZ_JJLU01000038.1 Protein Homology CDS 1716 1943 . - 0 ID=cds-WP_001143120.1;Parent=gene-AC00_RS18645;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;gene=yccJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AC00_RS18645;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 1964 2560 . - . ID=gene-AC00_RS18640;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AC00_RS18640;old_locus_tag=AC00_1118 NZ_JJLU01000038.1 Protein Homology CDS 1964 2560 . - 0 ID=cds-WP_001151437.1;Parent=gene-AC00_RS18640;Dbxref=GenBank:WP_001151437.1;Name=WP_001151437.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AC00_RS18640;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001151437.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 2933 3106 . + . ID=gene-AC00_RS0124145;Name=ymdF;gbkey=Gene;gene=ymdF;gene_biotype=protein_coding;locus_tag=AC00_RS0124145;old_locus_tag=AC00_1119 NZ_JJLU01000038.1 Protein Homology CDS 2933 3106 . + 0 ID=cds-WP_001273658.1;Parent=gene-AC00_RS0124145;Dbxref=GenBank:WP_001273658.1;Name=WP_001273658.1;Ontology_term=GO:0006950;gbkey=CDS;gene=ymdF;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415525.2;locus_tag=AC00_RS0124145;product=general stress protein;protein_id=WP_001273658.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 3189 4517 . - . ID=gene-AC00_RS18635;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=AC00_RS18635;old_locus_tag=AC00_1120 NZ_JJLU01000038.1 Protein Homology CDS 3189 4517 . - 0 ID=cds-WP_032280692.1;Parent=gene-AC00_RS18635;Dbxref=GenBank:WP_032280692.1;Name=WP_032280692.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309279.2;locus_tag=AC00_RS18635;product=pyrimidine utilization transport protein G;protein_id=WP_032280692.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 4538 5032 . - . ID=gene-AC00_RS18630;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=AC00_RS18630;old_locus_tag=AC00_1121 NZ_JJLU01000038.1 Protein Homology CDS 4538 5032 . - 0 ID=cds-WP_001028095.1;Parent=gene-AC00_RS18630;Dbxref=GenBank:WP_001028095.1;Name=WP_001028095.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309280.2;locus_tag=AC00_RS18630;product=NADH-dependent FMN reductase RutF;protein_id=WP_001028095.1;transl_table=11 NZ_JJLU01000038.1 RefSeq pseudogene 5043 5634 . - . ID=gene-AC00_RS18625;Name=rutE;gbkey=Gene;gene=rutE;gene_biotype=pseudogene;locus_tag=AC00_RS18625;old_locus_tag=AC00_1122;pseudo=true NZ_JJLU01000038.1 Protein Homology CDS 5043 5634 . - 0 ID=cds-AC00_RS18625;Parent=gene-AC00_RS18625;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=rutE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309281.1;locus_tag=AC00_RS18625;product=malonic semialdehyde reductase;pseudo=true;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 5644 6444 . - . ID=gene-AC00_RS18620;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=AC00_RS18620;old_locus_tag=AC00_1123 NZ_JJLU01000038.1 Protein Homology CDS 5644 6444 . - 0 ID=cds-WP_032280693.1;Parent=gene-AC00_RS18620;Dbxref=GenBank:WP_032280693.1;Name=WP_032280693.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309282.1;locus_tag=AC00_RS18620;product=pyrimidine utilization protein D;protein_id=WP_032280693.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 6452 6838 . - . ID=gene-AC00_RS18615;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=AC00_RS18615;old_locus_tag=AC00_1124 NZ_JJLU01000038.1 Protein Homology CDS 6452 6838 . - 0 ID=cds-WP_001126780.1;Parent=gene-AC00_RS18615;Dbxref=GenBank:WP_001126780.1;Name=WP_001126780.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415530.1;locus_tag=AC00_RS18615;product=3-aminoacrylate deaminase;protein_id=WP_001126780.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 6850 7542 . - . ID=gene-AC00_RS18610;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=AC00_RS18610;old_locus_tag=AC00_1125 NZ_JJLU01000038.1 Protein Homology CDS 6850 7542 . - 0 ID=cds-WP_032280704.1;Parent=gene-AC00_RS18610;Dbxref=GenBank:WP_032280704.1;Name=WP_032280704.1;gbkey=CDS;gene=rutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415531.2;locus_tag=AC00_RS18610;product=peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB;protein_id=WP_032280704.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 7542 8633 . - . ID=gene-AC00_RS18605;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=AC00_RS18605;old_locus_tag=AC00_1126 NZ_JJLU01000038.1 Protein Homology CDS 7542 8633 . - 0 ID=cds-WP_032280706.1;Parent=gene-AC00_RS18605;Dbxref=GenBank:WP_032280706.1;Name=WP_032280706.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=AC00_RS18605;product=pyrimidine utilization protein A;protein_id=WP_032280706.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 8921 9559 . + . ID=gene-AC00_RS18600;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=AC00_RS18600;old_locus_tag=AC00_1127 NZ_JJLU01000038.1 Protein Homology CDS 8921 9559 . + 0 ID=cds-WP_001567830.1;Parent=gene-AC00_RS18600;Dbxref=GenBank:WP_001567830.1;Name=WP_001567830.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415533.1;locus_tag=AC00_RS18600;product=HTH-type transcriptional regulator RutR;protein_id=WP_001567830.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 9599 13561 . - . ID=gene-AC00_RS18595;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=AC00_RS18595;old_locus_tag=AC00_1128 NZ_JJLU01000038.1 Protein Homology CDS 9599 13561 . - 0 ID=cds-WP_032280694.1;Parent=gene-AC00_RS18595;Dbxref=GenBank:WP_032280694.1;Name=WP_032280694.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=AC00_RS18595;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_032280694.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 13616 13825 . + . ID=gene-AC00_RS0124150;Name=AC00_RS0124150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124150;old_locus_tag=AC00_1129 NZ_JJLU01000038.1 GeneMarkS-2+ CDS 13616 13825 . + 0 ID=cds-WP_024226942.1;Parent=gene-AC00_RS0124150;Dbxref=GenBank:WP_024226942.1;Name=WP_024226942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0124150;product=hypothetical protein;protein_id=WP_024226942.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 13984 15492 . + . ID=gene-AC00_RS18590;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=AC00_RS18590;old_locus_tag=AC00_1131 NZ_JJLU01000038.1 Protein Homology CDS 13984 15492 . + 0 ID=cds-WP_001018485.1;Parent=gene-AC00_RS18590;Dbxref=GenBank:WP_001018485.1;Name=WP_001018485.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309288.1;locus_tag=AC00_RS18590;product=sodium/proline symporter PutP;protein_id=WP_001018485.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 15641 16969 . - . ID=gene-AC00_RS18585;Name=AC00_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18585;old_locus_tag=AC00_1132 NZ_JJLU01000038.1 Protein Homology CDS 15641 16969 . - 0 ID=cds-WP_032280695.1;Parent=gene-AC00_RS18585;Dbxref=GenBank:WP_032280695.1;Name=WP_032280695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309289.1;locus_tag=AC00_RS18585;product=hypothetical protein;protein_id=WP_032280695.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 18151 18981 . + . ID=gene-AC00_RS18575;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=AC00_RS18575;old_locus_tag=AC00_1134 NZ_JJLU01000038.1 Protein Homology CDS 18151 18981 . + 0 ID=cds-WP_000497953.1;Parent=gene-AC00_RS18575;Dbxref=GenBank:WP_000497953.1;Name=WP_000497953.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309290.1;locus_tag=AC00_RS18575;product=iron uptake transporter permease EfeU;protein_id=WP_000497953.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 19039 20166 . + . ID=gene-AC00_RS18570;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=AC00_RS18570;old_locus_tag=AC00_1135 NZ_JJLU01000038.1 Protein Homology CDS 19039 20166 . + 0 ID=cds-WP_032280696.1;Parent=gene-AC00_RS18570;Dbxref=GenBank:WP_032280696.1;Name=WP_032280696.1;gbkey=CDS;gene=efeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309291.1;locus_tag=AC00_RS18570;product=iron uptake system protein EfeO;protein_id=WP_032280696.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 20172 21443 . + . ID=gene-AC00_RS18565;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=AC00_RS18565;old_locus_tag=AC00_1136 NZ_JJLU01000038.1 Protein Homology CDS 20172 21443 . + 0 ID=cds-WP_032280697.1;Parent=gene-AC00_RS18565;Dbxref=GenBank:WP_032280697.1;Name=WP_032280697.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309292.1;locus_tag=AC00_RS18565;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_032280697.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 22064 22852 . + . ID=gene-AC00_RS18560;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=AC00_RS18560;old_locus_tag=AC00_1137 NZ_JJLU01000038.1 Protein Homology CDS 22064 22852 . + 0 ID=cds-WP_000533533.1;Parent=gene-AC00_RS18560;Dbxref=GenBank:WP_000533533.1;Name=WP_000533533.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741490.1;locus_tag=AC00_RS18560;product=phosphate starvation-inducible protein PhoH;protein_id=WP_000533533.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 22902 23315 . - . ID=gene-AC00_RS18555;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=AC00_RS18555;old_locus_tag=AC00_1138 NZ_JJLU01000038.1 Protein Homology CDS 22902 23315 . - 0 ID=cds-WP_024226558.1;Parent=gene-AC00_RS18555;Dbxref=GenBank:WP_024226558.1;Name=WP_024226558.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309294.1;locus_tag=AC00_RS18555;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_024226558.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 23317 24642 . - . ID=gene-AC00_RS0124160;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=AC00_RS0124160 NZ_JJLU01000038.1 Protein Homology CDS 23317 24642 . - 0 ID=cds-WP_000610451.1;Parent=gene-AC00_RS0124160;Dbxref=GenBank:WP_000610451.1;Name=WP_000610451.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415541.1;locus_tag=AC00_RS0124160;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_000610451.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 24635 26653 . - . ID=gene-AC00_RS18550;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=AC00_RS18550;old_locus_tag=AC00_1140 NZ_JJLU01000038.1 Protein Homology CDS 24635 26653 . - 0 ID=cds-WP_032280700.1;Parent=gene-AC00_RS18550;Dbxref=GenBank:WP_032280700.1;Name=WP_032280700.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415542.1;locus_tag=AC00_RS18550;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_032280700.1;transl_table=11 NZ_JJLU01000038.1 RefSeq pseudogene 26662 29084 . - . ID=gene-AC00_RS18545;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=pseudogene;locus_tag=AC00_RS18545;old_locus_tag=AC00_1141;pseudo=true NZ_JJLU01000038.1 Protein Homology CDS 26662 29084 . - 0 ID=cds-AC00_RS18545;Parent=gene-AC00_RS18545;Note=frameshifted;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309297.1;locus_tag=AC00_RS18545;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;pseudo=true;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 29672 31030 . + . ID=gene-AC00_RS18540;Name=dgcT;gbkey=Gene;gene=dgcT;gene_biotype=protein_coding;locus_tag=AC00_RS18540;old_locus_tag=AC00_1142 NZ_JJLU01000038.1 Protein Homology CDS 29672 31030 . + 0 ID=cds-WP_032280703.1;Parent=gene-AC00_RS18540;Dbxref=GenBank:WP_032280703.1;Name=WP_032280703.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcT;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309298.1;locus_tag=AC00_RS18540;product=GGDEF domain-containing protein;protein_id=WP_032280703.1;transl_table=11 NZ_JJLU01000038.1 RefSeq gene 31231 31453 . + . ID=gene-AC00_RS27330;Name=AC00_RS27330;end_range=31453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27330;old_locus_tag=AC00_1143;partial=true NZ_JJLU01000038.1 Protein Homology CDS 31231 31453 . + 0 ID=cds-WP_000179206.1;Parent=gene-AC00_RS27330;Dbxref=GenBank:WP_000179206.1;Name=WP_000179206.1;Ontology_term=GO:0006313;end_range=31453,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27330;partial=true;product=IS1 family transposase;protein_id=WP_000179206.1;transl_table=11 ##sequence-region NZ_JJLU01000039.1 1 4712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000039.1 RefSeq region 1 4712 . + . ID=NZ_JJLU01000039.1:1..4712;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000039.1 RefSeq gene 1 665 . + . ID=gene-AC00_RS0124170;Name=AC00_RS0124170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124170;old_locus_tag=AC00_1144;partial=true;start_range=.,1 NZ_JJLU01000039.1 Protein Homology CDS 1 217 . + 0 ID=cds-WP_248790328.1;Parent=gene-AC00_RS0124170;Dbxref=GenBank:WP_248790328.1;Name=WP_248790328.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124170;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_248790328.1;start_range=.,1;transl_table=11 NZ_JJLU01000039.1 Protein Homology CDS 217 665 . + 2 ID=cds-WP_248790328.1;Parent=gene-AC00_RS0124170;Dbxref=GenBank:WP_248790328.1;Name=WP_248790328.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124170;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_248790328.1;transl_table=11 NZ_JJLU01000039.1 RefSeq pseudogene 677 1189 . + . ID=gene-AC00_RS18535;Name=AC00_RS18535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS18535;old_locus_tag=AC00_1145;partial=true;pseudo=true;start_range=.,677 NZ_JJLU01000039.1 Protein Homology CDS 677 1189 . + 0 ID=cds-AC00_RS18535;Parent=gene-AC00_RS18535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0042953,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309322.1;locus_tag=AC00_RS18535;partial=true;product=outer membrane lipoprotein-sorting protein;pseudo=true;start_range=.,677;transl_table=11 NZ_JJLU01000039.1 RefSeq gene 1186 2574 . + . ID=gene-AC00_RS18530;Name=AC00_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18530;old_locus_tag=AC00_1146 NZ_JJLU01000039.1 Protein Homology CDS 1186 2574 . + 0 ID=cds-WP_032280708.1;Parent=gene-AC00_RS18530;Dbxref=GenBank:WP_032280708.1;Name=WP_032280708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309323.1;locus_tag=AC00_RS18530;product=hypothetical protein;protein_id=WP_032280708.1;transl_table=11 NZ_JJLU01000039.1 RefSeq gene 2588 3529 . + . ID=gene-AC00_RS26755;Name=AC00_RS26755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26755;old_locus_tag=AC00_1147 NZ_JJLU01000039.1 Protein Homology CDS 2588 3529 . + 0 ID=cds-WP_001536743.1;Parent=gene-AC00_RS26755;Dbxref=GenBank:WP_001536743.1;Name=WP_001536743.1;Ontology_term=GO:0006633,GO:0004314,GO:0016740;gbkey=CDS;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA,transferase activity|0016740||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309324.2;locus_tag=AC00_RS26755;product=ACP S-malonyltransferase;protein_id=WP_001536743.1;transl_table=11 NZ_JJLU01000039.1 RefSeq gene 3526 4512 . + . ID=gene-AC00_RS18520;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AC00_RS18520;old_locus_tag=AC00_1148 NZ_JJLU01000039.1 Protein Homology CDS 3526 4512 . + 0 ID=cds-WP_032280709.1;Parent=gene-AC00_RS18520;Dbxref=GenBank:WP_032280709.1;Name=WP_032280709.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309325.1;locus_tag=AC00_RS18520;product=protein YcdU;protein_id=WP_032280709.1;transl_table=11 ##sequence-region NZ_JJLU01000040.1 1 3571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000040.1 RefSeq region 1 3571 . + . ID=NZ_JJLU01000040.1:1..3571;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000040.1 RefSeq gene 1 777 . + . ID=gene-AC00_RS30860;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AC00_RS30860;partial=true;start_range=.,1 NZ_JJLU01000040.1 Protein Homology CDS 1 777 . + 0 ID=cds-WP_050438636.1;Parent=gene-AC00_RS30860;Dbxref=GenBank:WP_050438636.1;Name=WP_050438636.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309325.1;locus_tag=AC00_RS30860;partial=true;product=protein YcdU;protein_id=WP_050438636.1;start_range=.,1;transl_table=11 NZ_JJLU01000040.1 RefSeq gene 1505 2722 . + . ID=gene-AC00_RS18515;Name=AC00_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18515;old_locus_tag=AC00_1150 NZ_JJLU01000040.1 Protein Homology CDS 1505 2722 . + 0 ID=cds-WP_000279859.1;Parent=gene-AC00_RS18515;Dbxref=GenBank:WP_000279859.1;Name=WP_000279859.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000279856.1;locus_tag=AC00_RS18515;product=tyrosine-type recombinase/integrase;protein_id=WP_000279859.1;transl_table=11 NZ_JJLU01000040.1 RefSeq gene 2892 3571 . - . ID=gene-AC00_RS18510;Name=AC00_RS18510;end_range=3571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18510;old_locus_tag=AC00_1152;partial=true NZ_JJLU01000040.1 Protein Homology CDS 2892 3571 . - 2 ID=cds-WP_032238042.1;Parent=gene-AC00_RS18510;Dbxref=GenBank:WP_032238042.1;Name=WP_032238042.1;end_range=3571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231106.1;locus_tag=AC00_RS18510;partial=true;product=DUF3987 domain-containing protein;protein_id=WP_032238042.1;transl_table=11 ##sequence-region NZ_JJLU01000041.1 1 7746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000041.1 RefSeq region 1 7746 . + . ID=NZ_JJLU01000041.1:1..7746;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000041.1 RefSeq gene 106 327 . + . ID=gene-AC00_RS18505;Name=AC00_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18505;old_locus_tag=AC00_1154 NZ_JJLU01000041.1 Protein Homology CDS 106 327 . + 0 ID=cds-WP_000692345.1;Parent=gene-AC00_RS18505;Dbxref=GenBank:WP_000692345.1;Name=WP_000692345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AC00_RS18505;product=DUF987 domain-containing protein;protein_id=WP_000692345.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 490 864 . + . ID=gene-AC00_RS0124180;Name=AC00_RS0124180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124180;old_locus_tag=AC00_1156 NZ_JJLU01000041.1 Protein Homology CDS 490 864 . + 0 ID=cds-WP_001280955.1;Parent=gene-AC00_RS0124180;Dbxref=GenBank:WP_001280955.1;Name=WP_001280955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309432.1;locus_tag=AC00_RS0124180;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_001280955.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 911 1285 . + . ID=gene-AC00_RS18495;Name=AC00_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18495;old_locus_tag=AC00_1157 NZ_JJLU01000041.1 Protein Homology CDS 911 1285 . + 0 ID=cds-WP_000854914.1;Parent=gene-AC00_RS18495;Dbxref=GenBank:WP_000854914.1;Name=WP_000854914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309433.1;locus_tag=AC00_RS18495;product=TA system toxin CbtA family protein;protein_id=WP_000854914.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 1282 1773 . + . ID=gene-AC00_RS18490;Name=AC00_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18490;old_locus_tag=AC00_1158 NZ_JJLU01000041.1 Protein Homology CDS 1282 1773 . + 0 ID=cds-WP_000976857.1;Parent=gene-AC00_RS18490;Dbxref=GenBank:WP_000976857.1;Name=WP_000976857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309434.3;locus_tag=AC00_RS18490;product=DUF5983 family protein;protein_id=WP_000976857.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 1785 1982 . + . ID=gene-AC00_RS18485;Name=AC00_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18485;old_locus_tag=AC00_1159 NZ_JJLU01000041.1 Protein Homology CDS 1785 1982 . + 0 ID=cds-WP_000839282.1;Parent=gene-AC00_RS18485;Dbxref=GenBank:WP_000839282.1;Name=WP_000839282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AC00_RS18485;product=DUF957 domain-containing protein;protein_id=WP_000839282.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 2067 2909 . + . ID=gene-AC00_RS18480;Name=AC00_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18480;old_locus_tag=AC00_1160 NZ_JJLU01000041.1 Protein Homology CDS 2067 2909 . + 0 ID=cds-WP_032280716.1;Parent=gene-AC00_RS18480;Dbxref=GenBank:WP_032280716.1;Name=WP_032280716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309436.1;locus_tag=AC00_RS18480;product=DUF4942 domain-containing protein;protein_id=WP_032280716.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 3059 3146 . - . ID=gene-AC00_RS18475;Name=AC00_RS18475;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS18475;old_locus_tag=AC00_1161 NZ_JJLU01000041.1 tRNAscan-SE tRNA 3059 3146 . - . ID=rna-AC00_RS18475;Parent=gene-AC00_RS18475;anticodon=(pos:complement(3110..3112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS18475;product=tRNA-Ser NZ_JJLU01000041.1 tRNAscan-SE exon 3059 3146 . - . ID=exon-AC00_RS18475-1;Parent=rna-AC00_RS18475;anticodon=(pos:complement(3110..3112));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS18475;product=tRNA-Ser NZ_JJLU01000041.1 RefSeq gene 3380 4318 . + . ID=gene-AC00_RS18470;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=AC00_RS18470;old_locus_tag=AC00_1162 NZ_JJLU01000041.1 Protein Homology CDS 3380 4318 . + 0 ID=cds-WP_000351322.1;Parent=gene-AC00_RS18470;Dbxref=GenBank:WP_000351322.1;Name=WP_000351322.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415551.2;locus_tag=AC00_RS18470;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_000351322.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 4373 5110 . + . ID=gene-AC00_RS18465;Name=ycdX;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=AC00_RS18465;old_locus_tag=AC00_1163 NZ_JJLU01000041.1 Protein Homology CDS 4373 5110 . + 0 ID=cds-WP_000283664.1;Parent=gene-AC00_RS18465;Dbxref=GenBank:WP_000283664.1;Name=WP_000283664.1;gbkey=CDS;gene=ycdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309438.1;locus_tag=AC00_RS18465;product=zinc-binding phosphatase;protein_id=WP_000283664.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 5134 5688 . + . ID=gene-AC00_RS18460;Name=ycdY;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=AC00_RS18460;old_locus_tag=AC00_1164 NZ_JJLU01000041.1 Protein Homology CDS 5134 5688 . + 0 ID=cds-WP_032280717.1;Parent=gene-AC00_RS18460;Dbxref=GenBank:WP_032280717.1;Name=WP_032280717.1;gbkey=CDS;gene=ycdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=AC00_RS18460;product=molecular chaperone YcdY;protein_id=WP_032280717.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 5790 6281 . + . ID=gene-AC00_RS18455;Name=ycdZ;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=AC00_RS18455;old_locus_tag=AC00_1165 NZ_JJLU01000041.1 Protein Homology CDS 5790 6281 . + 0 ID=cds-WP_001301587.1;Parent=gene-AC00_RS18455;Dbxref=GenBank:WP_001301587.1;Name=WP_001301587.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ycdZ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415554.4;locus_tag=AC00_RS18455;product=DUF1097 domain-containing protein;protein_id=WP_001301587.1;transl_table=11 NZ_JJLU01000041.1 RefSeq gene 6345 7178 . - . ID=gene-AC00_RS18450;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=AC00_RS18450;old_locus_tag=AC00_1166 NZ_JJLU01000041.1 Protein Homology CDS 6345 7178 . - 0 ID=cds-WP_001189321.1;Parent=gene-AC00_RS18450;Dbxref=GenBank:WP_001189321.1;Name=WP_001189321.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309441.1;locus_tag=AC00_RS18450;product=curli production assembly/transport protein CsgG;protein_id=WP_001189321.1;transl_table=11 NZ_JJLU01000041.1 RefSeq pseudogene 7205 7423 . - . ID=gene-AC00_RS0124185;Name=AC00_RS0124185;end_range=7423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124185;partial=true;pseudo=true NZ_JJLU01000041.1 Protein Homology CDS 7205 7423 . - 0 ID=cds-AC00_RS0124185;Parent=gene-AC00_RS0124185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AC00_RS0124185;partial=true;product=curli assembly protein CsgF;pseudo=true;transl_table=11 NZ_JJLU01000041.1 RefSeq pseudogene 7441 7746 . - . ID=gene-AC00_RS18445;Name=AC00_RS18445;end_range=7746,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS18445;old_locus_tag=AC00_1168;partial=true;pseudo=true NZ_JJLU01000041.1 Protein Homology CDS 7441 7746 . - 0 ID=cds-AC00_RS18445;Parent=gene-AC00_RS18445;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=7746,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS18445;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000042.1 1 686 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000042.1 RefSeq region 1 686 . + . ID=NZ_JJLU01000042.1:1..686;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000042.1 RefSeq gene 1 156 . - . ID=gene-AC00_RS27340;Name=AC00_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27340;old_locus_tag=AC00_1169;partial=true;start_range=.,1 NZ_JJLU01000042.1 Protein Homology CDS 1 156 . - 0 ID=cds-WP_001392526.1;Parent=gene-AC00_RS27340;Dbxref=GenBank:WP_001392526.1;Name=WP_001392526.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27340;partial=true;product=IS1 family transposase;protein_id=WP_001392526.1;start_range=.,1;transl_table=11 NZ_JJLU01000042.1 RefSeq pseudogene 191 394 . - . ID=gene-AC00_RS0124190;Name=AC00_RS0124190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124190;old_locus_tag=AC00_1170;partial=true;pseudo=true;start_range=.,191 NZ_JJLU01000042.1 Protein Homology CDS 191 394 . - 0 ID=cds-AC00_RS0124190;Parent=gene-AC00_RS0124190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309442.1;locus_tag=AC00_RS0124190;partial=true;product=curli assembly protein CsgF;pseudo=true;start_range=.,191;transl_table=11 NZ_JJLU01000042.1 RefSeq gene 419 686 . - . ID=gene-AC00_RS0124195;Name=csgE;end_range=686,.;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=AC00_RS0124195;partial=true NZ_JJLU01000042.1 Protein Homology CDS 419 686 . - 1 ID=cds-WP_032288184.1;Parent=gene-AC00_RS0124195;Dbxref=GenBank:WP_032288184.1;Name=WP_032288184.1;end_range=686,.;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=AC00_RS0124195;partial=true;product=curli production assembly/transport protein CsgE;protein_id=WP_032288184.1;transl_table=11 ##sequence-region NZ_JJLU01000043.1 1 15540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000043.1 RefSeq region 1 15540 . + . ID=NZ_JJLU01000043.1:1..15540;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000043.1 RefSeq gene 1 251 . + . ID=gene-AC00_RS18440;Name=AC00_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18440;old_locus_tag=AC00_1172;partial=true;start_range=.,1 NZ_JJLU01000043.1 Protein Homology CDS 1 251 . + 2 ID=cds-WP_000675026.1;Parent=gene-AC00_RS18440;Dbxref=GenBank:WP_000675026.1;Name=WP_000675026.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS18440;partial=true;product=IS1 family transposase;protein_id=WP_000675026.1;start_range=.,1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 279 734 . + . ID=gene-AC00_RS0124200;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=AC00_RS0124200 NZ_JJLU01000043.1 Protein Homology CDS 279 734 . + 0 ID=cds-WP_002431194.1;Parent=gene-AC00_RS0124200;Dbxref=GenBank:WP_002431194.1;Name=WP_002431194.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309446.1;locus_tag=AC00_RS0124200;product=curli minor subunit CsgB;protein_id=WP_002431194.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 775 1233 . + . ID=gene-AC00_RS18435;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=AC00_RS18435;old_locus_tag=AC00_1174 NZ_JJLU01000043.1 Protein Homology CDS 775 1233 . + 0 ID=cds-WP_000771428.1;Parent=gene-AC00_RS18435;Dbxref=GenBank:WP_000771428.1;Name=WP_000771428.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309447.1;locus_tag=AC00_RS18435;product=curli major subunit CsgA;protein_id=WP_000771428.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 1292 1624 . + . ID=gene-AC00_RS0124205;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=AC00_RS0124205 NZ_JJLU01000043.1 Protein Homology CDS 1292 1624 . + 0 ID=cds-WP_000992818.1;Parent=gene-AC00_RS0124205;Dbxref=GenBank:WP_000992818.1;Name=WP_000992818.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309448.1;locus_tag=AC00_RS0124205;product=curli assembly chaperone CsgC;protein_id=WP_000992818.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 1745 2056 . + . ID=gene-AC00_RS18430;Name=ymdA;gbkey=Gene;gene=ymdA;gene_biotype=protein_coding;locus_tag=AC00_RS18430;old_locus_tag=AC00_1176 NZ_JJLU01000043.1 Protein Homology CDS 1745 2056 . + 0 ID=cds-WP_000489581.1;Parent=gene-AC00_RS18430;Dbxref=GenBank:WP_000489581.1;Name=WP_000489581.1;gbkey=CDS;gene=ymdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309449.1;locus_tag=AC00_RS18430;product=protein YmdA;protein_id=WP_000489581.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 2151 2684 . + . ID=gene-AC00_RS18425;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=AC00_RS18425;old_locus_tag=AC00_1177 NZ_JJLU01000043.1 Protein Homology CDS 2151 2684 . + 0 ID=cds-WP_000857405.1;Parent=gene-AC00_RS18425;Dbxref=GenBank:WP_000857405.1;Name=WP_000857405.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309450.1;locus_tag=AC00_RS18425;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_000857405.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 2626 4107 . + . ID=gene-AC00_RS18420;Name=clsC;gbkey=Gene;gene=clsC;gene_biotype=protein_coding;locus_tag=AC00_RS18420;old_locus_tag=AC00_1178 NZ_JJLU01000043.1 Protein Homology CDS 2626 4107 . + 0 ID=cds-WP_122999006.1;Parent=gene-AC00_RS18420;Dbxref=GenBank:WP_122999006.1;Name=WP_122999006.1;gbkey=CDS;gene=clsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706957.2;locus_tag=AC00_RS18420;product=cardiolipin synthase ClsC;protein_id=WP_122999006.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 4115 5272 . - . ID=gene-AC00_RS18415;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=AC00_RS18415;old_locus_tag=AC00_1179 NZ_JJLU01000043.1 Protein Homology CDS 4115 5272 . - 0 ID=cds-WP_001070350.1;Parent=gene-AC00_RS18415;Dbxref=GenBank:WP_001070350.1;Name=WP_001070350.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706958.2;locus_tag=AC00_RS18415;product=glucans biosynthesis protein MdoC;protein_id=WP_001070350.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 5666 7201 . + . ID=gene-AC00_RS18400;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=AC00_RS18400;old_locus_tag=AC00_1182 NZ_JJLU01000043.1 Protein Homology CDS 5666 7201 . + 0 ID=cds-WP_077757366.1;Parent=gene-AC00_RS18400;Dbxref=GenBank:WP_077757366.1;Name=WP_077757366.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415566.1;locus_tag=AC00_RS18400;product=glucans biosynthesis protein MdoG;protein_id=WP_077757366.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 7194 9737 . + . ID=gene-AC00_RS18395;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=AC00_RS18395;old_locus_tag=AC00_1183 NZ_JJLU01000043.1 Protein Homology CDS 7194 9737 . + 0 ID=cds-WP_001295445.1;Parent=gene-AC00_RS18395;Dbxref=GenBank:WP_001295445.1;Name=WP_001295445.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415567.1;locus_tag=AC00_RS18395;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_001295445.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 9910 10137 . + . ID=gene-AC00_RS18390;Name=yceK;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=AC00_RS18390;old_locus_tag=AC00_1184 NZ_JJLU01000043.1 Protein Homology CDS 9910 10137 . + 0 ID=cds-WP_001237205.1;Parent=gene-AC00_RS18390;Dbxref=GenBank:WP_001237205.1;Name=WP_001237205.1;gbkey=CDS;gene=yceK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309455.1;locus_tag=AC00_RS18390;product=YceK/YidQ family lipoprotein;protein_id=WP_001237205.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 10138 10512 . - . ID=gene-AC00_RS18385;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AC00_RS18385;old_locus_tag=AC00_1185 NZ_JJLU01000043.1 Protein Homology CDS 10138 10512 . - 0 ID=cds-WP_000180056.1;Parent=gene-AC00_RS18385;Dbxref=GenBank:WP_000180056.1;Name=WP_000180056.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=AC00_RS18385;product=MysB family protein;protein_id=WP_000180056.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 10595 11821 . - . ID=gene-AC00_RS18380;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=AC00_RS18380;old_locus_tag=AC00_1186 NZ_JJLU01000043.1 Protein Homology CDS 10595 11821 . - 0 ID=cds-WP_000074172.1;Parent=gene-AC00_RS18380;Dbxref=GenBank:WP_000074172.1;Name=WP_000074172.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415571.1;locus_tag=AC00_RS18380;product=multidrug efflux MFS transporter MdtG;protein_id=WP_000074172.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 11993 12913 . - . ID=gene-AC00_RS18375;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=AC00_RS18375;old_locus_tag=AC00_1187 NZ_JJLU01000043.1 Protein Homology CDS 11993 12913 . - 0 ID=cds-WP_000183364.1;Parent=gene-AC00_RS18375;Dbxref=GenBank:WP_000183364.1;Name=WP_000183364.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=AC00_RS18375;product=kdo(2)-lipid IV(A) lauroyltransferase;protein_id=WP_000183364.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 13138 14190 . + . ID=gene-AC00_RS18370;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;locus_tag=AC00_RS18370;old_locus_tag=AC00_1188 NZ_JJLU01000043.1 Protein Homology CDS 13138 14190 . + 0 ID=cds-WP_001295959.1;Parent=gene-AC00_RS18370;Dbxref=GenBank:WP_001295959.1;Name=WP_001295959.1;gbkey=CDS;gene=trhO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706977.2;locus_tag=AC00_RS18370;product=rhodanese-related sulfurtransferase;protein_id=WP_001295959.1;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 14232 14807 . - . ID=gene-AC00_RS18365;Name=yceI;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=AC00_RS18365;old_locus_tag=AC00_1189 NZ_JJLU01000043.1 Protein Homology CDS 14232 14807 . - 0 ID=cds-WP_000749261.1;Parent=gene-AC00_RS18365;Dbxref=GenBank:WP_000749261.1;Name=WP_000749261.1;gbkey=CDS;gene=yceI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309461.1;locus_tag=AC00_RS18365;product=YceI family protein;protein_id=WP_000749261.1;transl_table=11 NZ_JJLU01000043.1 RefSeq pseudogene 14811 15254 . - . ID=gene-AC00_RS18360;Name=AC00_RS18360;end_range=15254,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS18360;old_locus_tag=AC00_1190;partial=true;pseudo=true NZ_JJLU01000043.1 Protein Homology CDS 14811 15254 . - 0 ID=cds-AC00_RS18360;Parent=gene-AC00_RS18360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;end_range=15254,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309462.1;locus_tag=AC00_RS18360;partial=true;product=cytochrome b;pseudo=true;transl_table=11 NZ_JJLU01000043.1 RefSeq gene 15271 15540 . - . ID=gene-AC00_RS18355;Name=AC00_RS18355;end_range=15540,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18355;old_locus_tag=AC00_1191;partial=true NZ_JJLU01000043.1 Protein Homology CDS 15271 15540 . - 0 ID=cds-WP_000318104.1;Parent=gene-AC00_RS18355;Dbxref=GenBank:WP_000318104.1;Name=WP_000318104.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=15540,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS18355;partial=true;product=IS1 family transposase;protein_id=WP_000318104.1;transl_table=11 ##sequence-region NZ_JJLU01000044.1 1 88719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000044.1 RefSeq region 1 88719 . + . ID=NZ_JJLU01000044.1:1..88719;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000044.1 RefSeq gene 1 232 . - . ID=gene-AC00_RS0124215;Name=AC00_RS0124215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124215;old_locus_tag=AC00_1192;partial=true;start_range=.,1 NZ_JJLU01000044.1 Protein Homology CDS 1 232 . - 0 ID=cds-WP_001397795.1-2;Parent=gene-AC00_RS0124215;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124215;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;start_range=.,1;transl_table=11 NZ_JJLU01000044.1 RefSeq pseudogene 287 418 . - . ID=gene-AC00_RS27345;Name=AC00_RS27345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27345;old_locus_tag=AC00_1193;partial=true;pseudo=true;start_range=.,287 NZ_JJLU01000044.1 Protein Homology CDS 287 418 . - 0 ID=cds-AC00_RS27345;Parent=gene-AC00_RS27345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309462.1;locus_tag=AC00_RS27345;partial=true;product=cytochrome b;pseudo=true;start_range=.,287;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 679 792 . - . ID=gene-AC00_RS18350;Name=AC00_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18350;old_locus_tag=AC00_1195 NZ_JJLU01000044.1 Protein Homology CDS 679 792 . - 0 ID=cds-WP_032280727.1;Parent=gene-AC00_RS18350;Dbxref=GenBank:WP_032280727.1;Name=WP_032280727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706980.2;locus_tag=AC00_RS18350;product=YceO family protein;protein_id=WP_032280727.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 840 1958 . - . ID=gene-AC00_RS18345;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=AC00_RS18345;old_locus_tag=AC00_1196 NZ_JJLU01000044.1 Protein Homology CDS 840 1958 . - 0 ID=cds-WP_032280729.1;Parent=gene-AC00_RS18345;Dbxref=GenBank:WP_032280729.1;Name=WP_032280729.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309464.1;locus_tag=AC00_RS18345;product=N-methyl-L-tryptophan oxidase;protein_id=WP_032280729.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 2073 2327 . - . ID=gene-AC00_RS18340;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=AC00_RS18340;old_locus_tag=AC00_1197 NZ_JJLU01000044.1 Protein Homology CDS 2073 2327 . - 0 ID=cds-WP_000414437.1;Parent=gene-AC00_RS18340;Dbxref=GenBank:WP_000414437.1;Name=WP_000414437.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309465.3;locus_tag=AC00_RS18340;product=biofilm formation regulator BssS;protein_id=WP_000414437.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 2617 2862 . - . ID=gene-AC00_RS18335;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=AC00_RS18335;old_locus_tag=AC00_1198 NZ_JJLU01000044.1 Protein Homology CDS 2617 2862 . - 0 ID=cds-WP_001217754.1;Parent=gene-AC00_RS18335;Dbxref=GenBank:WP_001217754.1;Name=WP_001217754.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309466.1;locus_tag=AC00_RS18335;product=DNA damage-inducible protein I;protein_id=WP_001217754.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 2936 3982 . - . ID=gene-AC00_RS18330;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=AC00_RS18330;old_locus_tag=AC00_1199 NZ_JJLU01000044.1 Protein Homology CDS 2936 3982 . - 0 ID=cds-WP_000126534.1;Parent=gene-AC00_RS18330;Dbxref=GenBank:WP_000126534.1;Name=WP_000126534.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=AC00_RS18330;product=dihydroorotase;protein_id=WP_000126534.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 4088 4648 . - . ID=gene-AC00_RS18325;Name=yceB;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=AC00_RS18325;old_locus_tag=AC00_1200 NZ_JJLU01000044.1 Protein Homology CDS 4088 4648 . - 0 ID=cds-WP_001295443.1;Parent=gene-AC00_RS18325;Dbxref=GenBank:WP_001295443.1;Name=WP_001295443.1;gbkey=CDS;gene=yceB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415581.1;locus_tag=AC00_RS18325;product=lipoprotein;protein_id=WP_001295443.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 4782 5429 . - . ID=gene-AC00_RS18320;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AC00_RS18320;old_locus_tag=AC00_1201 NZ_JJLU01000044.1 Protein Homology CDS 4782 5429 . - 0 ID=cds-WP_000780912.1;Parent=gene-AC00_RS18320;Dbxref=GenBank:WP_000780912.1;Name=WP_000780912.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309469.1;locus_tag=AC00_RS18320;product=glutaredoxin 2;protein_id=WP_000780912.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 5493 6701 . - . ID=gene-AC00_RS18315;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=AC00_RS18315;old_locus_tag=AC00_1202 NZ_JJLU01000044.1 Protein Homology CDS 5493 6701 . - 0 ID=cds-WP_000092206.1;Parent=gene-AC00_RS18315;Dbxref=GenBank:WP_000092206.1;Name=WP_000092206.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415583.4;locus_tag=AC00_RS18315;product=multidrug efflux MFS transporter MdtH;protein_id=WP_000092206.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 6936 7520 . + . ID=gene-AC00_RS18310;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=AC00_RS18310;old_locus_tag=AC00_1203 NZ_JJLU01000044.1 Protein Homology CDS 6936 7520 . + 0 ID=cds-WP_032280730.1;Parent=gene-AC00_RS18310;Dbxref=GenBank:WP_032280730.1;Name=WP_032280730.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309471.1;locus_tag=AC00_RS18310;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_032280730.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 7531 8178 . + . ID=gene-AC00_RS18305;Name=yceH;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=AC00_RS18305;old_locus_tag=AC00_1204 NZ_JJLU01000044.1 Protein Homology CDS 7531 8178 . + 0 ID=cds-WP_000877102.1;Parent=gene-AC00_RS18305;Dbxref=GenBank:WP_000877102.1;Name=WP_000877102.1;gbkey=CDS;gene=yceH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309472.1;locus_tag=AC00_RS18305;product=YceH family protein;protein_id=WP_000877102.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 8180 9103 . + . ID=gene-AC00_RS18300;Name=yceM;gbkey=Gene;gene=yceM;gene_biotype=protein_coding;locus_tag=AC00_RS18300;old_locus_tag=AC00_1205 NZ_JJLU01000044.1 Protein Homology CDS 8180 9103 . + 0 ID=cds-WP_000736162.1;Parent=gene-AC00_RS18300;Dbxref=GenBank:WP_000736162.1;Name=WP_000736162.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=yceM;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309473.1;locus_tag=AC00_RS18300;product=Gfo/Idh/MocA family protein;protein_id=WP_000736162.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 9213 10748 . + . ID=gene-AC00_RS18295;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AC00_RS18295;old_locus_tag=AC00_1206 NZ_JJLU01000044.1 Protein Homology CDS 9213 10748 . + 0 ID=cds-WP_032280731.1;Parent=gene-AC00_RS18295;Dbxref=GenBank:WP_032280731.1;Name=WP_032280731.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=AC00_RS18295;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_032280731.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 10788 11204 . - . ID=gene-AC00_RS18290;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=AC00_RS18290;old_locus_tag=AC00_1207 NZ_JJLU01000044.1 Protein Homology CDS 10788 11204 . - 0 ID=cds-WP_000197365.1;Parent=gene-AC00_RS18290;Dbxref=GenBank:WP_000197365.1;Name=WP_000197365.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309475.1;locus_tag=AC00_RS18290;product=flagella biosynthesis chaperone FlgN;protein_id=WP_000197365.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 11209 11502 . - . ID=gene-AC00_RS18285;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=AC00_RS18285;old_locus_tag=AC00_1208 NZ_JJLU01000044.1 Protein Homology CDS 11209 11502 . - 0 ID=cds-WP_000020884.1;Parent=gene-AC00_RS18285;Dbxref=GenBank:WP_000020884.1;Name=WP_000020884.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309476.1;locus_tag=AC00_RS18285;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_000020884.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 11578 12237 . - . ID=gene-AC00_RS18280;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=AC00_RS18280;old_locus_tag=AC00_1209 NZ_JJLU01000044.1 Protein Homology CDS 11578 12237 . - 0 ID=cds-WP_000955724.1;Parent=gene-AC00_RS18280;Dbxref=GenBank:WP_000955724.1;Name=WP_000955724.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706993.1;locus_tag=AC00_RS18280;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_000955724.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 12392 12808 . + . ID=gene-AC00_RS18275;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=AC00_RS18275;old_locus_tag=AC00_1210 NZ_JJLU01000044.1 Protein Homology CDS 12392 12808 . + 0 ID=cds-WP_000884702.1;Parent=gene-AC00_RS18275;Dbxref=GenBank:WP_000884702.1;Name=WP_000884702.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415591.1;locus_tag=AC00_RS18275;product=flagellar basal body rod protein FlgB;protein_id=WP_000884702.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 12812 13216 . + . ID=gene-AC00_RS18270;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=AC00_RS18270;old_locus_tag=AC00_1211 NZ_JJLU01000044.1 Protein Homology CDS 12812 13216 . + 0 ID=cds-WP_032280732.1;Parent=gene-AC00_RS18270;Dbxref=GenBank:WP_032280732.1;Name=WP_032280732.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=AC00_RS18270;product=flagellar basal body rod protein FlgC;protein_id=WP_032280732.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 13228 13923 . + . ID=gene-AC00_RS18265;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=AC00_RS18265;old_locus_tag=AC00_1212 NZ_JJLU01000044.1 Protein Homology CDS 13228 13923 . + 0 ID=cds-WP_032280733.1;Parent=gene-AC00_RS18265;Dbxref=GenBank:WP_032280733.1;Name=WP_032280733.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309480.1;locus_tag=AC00_RS18265;product=flagellar hook assembly protein FlgD;protein_id=WP_032280733.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 13948 15156 . + . ID=gene-AC00_RS18260;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=AC00_RS18260;old_locus_tag=AC00_1213 NZ_JJLU01000044.1 Protein Homology CDS 13948 15156 . + 0 ID=cds-WP_032280734.1;Parent=gene-AC00_RS18260;Dbxref=GenBank:WP_032280734.1;Name=WP_032280734.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415594.1;locus_tag=AC00_RS18260;product=flagellar hook protein FlgE;protein_id=WP_032280734.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 15176 15931 . + . ID=gene-AC00_RS18255;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=AC00_RS18255;old_locus_tag=AC00_1214 NZ_JJLU01000044.1 Protein Homology CDS 15176 15931 . + 0 ID=cds-WP_000349313.1;Parent=gene-AC00_RS18255;Dbxref=GenBank:WP_000349313.1;Name=WP_000349313.1;gbkey=CDS;gene=flgF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415595.1;locus_tag=AC00_RS18255;product=flagellar basal-body rod protein FlgF;protein_id=WP_000349313.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 16103 16885 . + . ID=gene-AC00_RS18250;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=AC00_RS18250;old_locus_tag=AC00_1215 NZ_JJLU01000044.1 Protein Homology CDS 16103 16885 . + 0 ID=cds-WP_000625837.1;Parent=gene-AC00_RS18250;Dbxref=GenBank:WP_000625837.1;Name=WP_000625837.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=AC00_RS18250;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625837.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 16938 17636 . + . ID=gene-AC00_RS18245;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=AC00_RS18245;old_locus_tag=AC00_1216 NZ_JJLU01000044.1 Protein Homology CDS 16938 17636 . + 0 ID=cds-WP_001295442.1;Parent=gene-AC00_RS18245;Dbxref=GenBank:WP_001295442.1;Name=WP_001295442.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=AC00_RS18245;product=flagellar basal body L-ring protein FlgH;protein_id=WP_001295442.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 17648 18745 . + . ID=gene-AC00_RS18240;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=AC00_RS18240;old_locus_tag=AC00_1217 NZ_JJLU01000044.1 Protein Homology CDS 17648 18745 . + 0 ID=cds-WP_000589326.1;Parent=gene-AC00_RS18240;Dbxref=GenBank:WP_000589326.1;Name=WP_000589326.1;gbkey=CDS;gene=flgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=AC00_RS18240;product=flagellar basal body P-ring protein FlgI;protein_id=WP_000589326.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 18745 19686 . + . ID=gene-AC00_RS18235;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=AC00_RS18235;old_locus_tag=AC00_1218 NZ_JJLU01000044.1 Protein Homology CDS 18745 19686 . + 0 ID=cds-WP_001295441.1;Parent=gene-AC00_RS18235;Dbxref=GenBank:WP_001295441.1;Name=WP_001295441.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415599.1;locus_tag=AC00_RS18235;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_001295441.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 19752 21395 . + . ID=gene-AC00_RS18230;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=AC00_RS18230;old_locus_tag=AC00_1219 NZ_JJLU01000044.1 Protein Homology CDS 19752 21395 . + 0 ID=cds-WP_032280736.1;Parent=gene-AC00_RS18230;Dbxref=GenBank:WP_032280736.1;Name=WP_032280736.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309487.1;locus_tag=AC00_RS18230;product=flagellar hook-associated protein FlgK;protein_id=WP_032280736.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 21407 22360 . + . ID=gene-AC00_RS18225;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=AC00_RS18225;old_locus_tag=AC00_1220 NZ_JJLU01000044.1 Protein Homology CDS 21407 22360 . + 0 ID=cds-WP_001212776.1;Parent=gene-AC00_RS18225;Dbxref=GenBank:WP_001212776.1;Name=WP_001212776.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309488.1;locus_tag=AC00_RS18225;product=flagellar hook-associated protein FlgL;protein_id=WP_001212776.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 22555 25740 . - . ID=gene-AC00_RS18220;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=AC00_RS18220;old_locus_tag=AC00_1221 NZ_JJLU01000044.1 Protein Homology CDS 22555 25740 . - 0 ID=cds-WP_032280737.1;Parent=gene-AC00_RS18220;Dbxref=GenBank:WP_032280737.1;Name=WP_032280737.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309489.1;locus_tag=AC00_RS18220;product=ribonuclease E;protein_id=WP_032280737.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 26313 27272 . + . ID=gene-AC00_RS18215;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=AC00_RS18215;old_locus_tag=AC00_1223 NZ_JJLU01000044.1 Protein Homology CDS 26313 27272 . + 0 ID=cds-WP_000846342.1;Parent=gene-AC00_RS18215;Dbxref=GenBank:WP_000846342.1;Name=WP_000846342.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309491.1;locus_tag=AC00_RS18215;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_000846342.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 27384 27968 . - . ID=gene-AC00_RS18210;Name=yceF;gbkey=Gene;gene=yceF;gene_biotype=protein_coding;locus_tag=AC00_RS18210;old_locus_tag=AC00_1224 NZ_JJLU01000044.1 Protein Homology CDS 27384 27968 . - 0 ID=cds-WP_001125202.1;Parent=gene-AC00_RS18210;Dbxref=GenBank:WP_001125202.1;Name=WP_001125202.1;gbkey=CDS;gene=yceF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415605.2;locus_tag=AC00_RS18210;product=7-methyl-GTP pyrophosphatase;protein_id=WP_001125202.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 28167 28688 . + . ID=gene-AC00_RS18205;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=AC00_RS18205;old_locus_tag=AC00_1225 NZ_JJLU01000044.1 Protein Homology CDS 28167 28688 . + 0 ID=cds-WP_001174482.1;Parent=gene-AC00_RS18205;Dbxref=GenBank:WP_001174482.1;Name=WP_001174482.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=AC00_RS18205;product=23S rRNA accumulation protein YceD;protein_id=WP_001174482.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 28740 28913 . + . ID=gene-AC00_RS18200;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AC00_RS18200;old_locus_tag=AC00_1226 NZ_JJLU01000044.1 Protein Homology CDS 28740 28913 . + 0 ID=cds-WP_000290727.1;Parent=gene-AC00_RS18200;Dbxref=GenBank:WP_000290727.1;Name=WP_000290727.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=AC00_RS18200;product=50S ribosomal protein L32;protein_id=WP_000290727.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 28994 30064 . + . ID=gene-AC00_RS18195;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AC00_RS18195;old_locus_tag=AC00_1227 NZ_JJLU01000044.1 Protein Homology CDS 28994 30064 . + 0 ID=cds-WP_071999225.1;Parent=gene-AC00_RS18195;Dbxref=GenBank:WP_071999225.1;Name=WP_071999225.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415608.2;locus_tag=AC00_RS18195;product=phosphate acyltransferase PlsX;protein_id=WP_071999225.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 30132 31085 . + . ID=gene-AC00_RS18190;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=AC00_RS18190;old_locus_tag=AC00_1228 NZ_JJLU01000044.1 Protein Homology CDS 30132 31085 . + 0 ID=cds-WP_000288132.1;Parent=gene-AC00_RS18190;Dbxref=GenBank:WP_000288132.1;Name=WP_000288132.1;gbkey=CDS;gene=fabH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=AC00_RS18190;product=beta-ketoacyl-ACP synthase III;protein_id=WP_000288132.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 31101 32030 . + . ID=gene-AC00_RS18185;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AC00_RS18185;old_locus_tag=AC00_1229 NZ_JJLU01000044.1 Protein Homology CDS 31101 32030 . + 0 ID=cds-WP_000191372.1;Parent=gene-AC00_RS18185;Dbxref=GenBank:WP_000191372.1;Name=WP_000191372.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415610.1;locus_tag=AC00_RS18185;product=ACP S-malonyltransferase;protein_id=WP_000191372.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 32043 32777 . + . ID=gene-AC00_RS18180;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AC00_RS18180;old_locus_tag=AC00_1230 NZ_JJLU01000044.1 Protein Homology CDS 32043 32777 . + 0 ID=cds-WP_001008535.1;Parent=gene-AC00_RS18180;Dbxref=GenBank:WP_001008535.1;Name=WP_001008535.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=AC00_RS18180;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_001008535.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 32988 33224 . + . ID=gene-AC00_RS18175;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AC00_RS18175;old_locus_tag=AC00_1231 NZ_JJLU01000044.1 Protein Homology CDS 32988 33224 . + 0 ID=cds-WP_000103754.1;Parent=gene-AC00_RS18175;Dbxref=GenBank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=AC00_RS18175;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 33312 34553 . + . ID=gene-AC00_RS18170;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AC00_RS18170;old_locus_tag=AC00_1232 NZ_JJLU01000044.1 Protein Homology CDS 33312 34553 . + 0 ID=cds-WP_000044679.1;Parent=gene-AC00_RS18170;Dbxref=GenBank:WP_000044679.1;Name=WP_000044679.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=AC00_RS18170;product=beta-ketoacyl-ACP synthase II;protein_id=WP_000044679.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 34673 35482 . + . ID=gene-AC00_RS18165;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=AC00_RS18165;old_locus_tag=AC00_1233 NZ_JJLU01000044.1 Protein Homology CDS 34673 35482 . + 0 ID=cds-WP_000478688.1;Parent=gene-AC00_RS18165;Dbxref=GenBank:WP_000478688.1;Name=WP_000478688.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415614.1;locus_tag=AC00_RS18165;product=aminodeoxychorismate lyase;protein_id=WP_000478688.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 35485 36507 . + . ID=gene-AC00_RS18160;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=AC00_RS18160;old_locus_tag=AC00_1234 NZ_JJLU01000044.1 Protein Homology CDS 35485 36507 . + 0 ID=cds-WP_032280739.1;Parent=gene-AC00_RS18160;Dbxref=GenBank:WP_032280739.1;Name=WP_032280739.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415615.1;locus_tag=AC00_RS18160;product=cell division protein YceG;protein_id=WP_032280739.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 36497 37138 . + . ID=gene-AC00_RS18155;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AC00_RS18155;old_locus_tag=AC00_1235 NZ_JJLU01000044.1 Protein Homology CDS 36497 37138 . + 0 ID=cds-WP_001257000.1;Parent=gene-AC00_RS18155;Dbxref=GenBank:WP_001257000.1;Name=WP_001257000.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=AC00_RS18155;product=dTMP kinase;protein_id=WP_001257000.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 37135 38139 . + . ID=gene-AC00_RS18150;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=AC00_RS18150;old_locus_tag=AC00_1236 NZ_JJLU01000044.1 Protein Homology CDS 37135 38139 . + 0 ID=cds-WP_001267908.1;Parent=gene-AC00_RS18150;Dbxref=GenBank:WP_001267908.1;Name=WP_001267908.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309504.1;locus_tag=AC00_RS18150;product=DNA polymerase III subunit delta';protein_id=WP_001267908.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 38150 38947 . + . ID=gene-AC00_RS18145;Name=ycfH;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=AC00_RS18145;old_locus_tag=AC00_1237 NZ_JJLU01000044.1 Protein Homology CDS 38150 38947 . + 0 ID=cds-WP_000480245.1;Parent=gene-AC00_RS18145;Dbxref=GenBank:WP_000480245.1;Name=WP_000480245.1;Ontology_term=GO:0016788;gbkey=CDS;gene=ycfH;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309505.1;locus_tag=AC00_RS18145;product=metal-dependent hydrolase;protein_id=WP_000480245.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 39242 40675 . + . ID=gene-AC00_RS18140;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=AC00_RS18140;old_locus_tag=AC00_1238 NZ_JJLU01000044.1 Protein Homology CDS 39242 40675 . + 0 ID=cds-WP_000475719.1;Parent=gene-AC00_RS18140;Dbxref=GenBank:WP_000475719.1;Name=WP_000475719.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=AC00_RS18140;product=PTS glucose transporter subunit IIBC;protein_id=WP_000475719.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 40735 42924 . - . ID=gene-AC00_RS18135;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=AC00_RS18135;old_locus_tag=AC00_1239 NZ_JJLU01000044.1 Protein Homology CDS 40735 42924 . - 0 ID=cds-WP_000953457.1;Parent=gene-AC00_RS18135;Dbxref=GenBank:WP_000953457.1;Name=WP_000953457.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309507.1;locus_tag=AC00_RS18135;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_000953457.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 43258 43617 . + . ID=gene-AC00_RS18130;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=AC00_RS18130;old_locus_tag=AC00_1241 NZ_JJLU01000044.1 Protein Homology CDS 43258 43617 . + 0 ID=cds-WP_000807125.1;Parent=gene-AC00_RS18130;Dbxref=GenBank:WP_000807125.1;Name=WP_000807125.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415621.3;locus_tag=AC00_RS18130;product=purine nucleoside phosphoramidase;protein_id=WP_000807125.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 43620 43997 . + . ID=gene-AC00_RS18125;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=AC00_RS18125;old_locus_tag=AC00_1242 NZ_JJLU01000044.1 Protein Homology CDS 43620 43997 . + 0 ID=cds-WP_001225281.1;Parent=gene-AC00_RS18125;Dbxref=GenBank:WP_001225281.1;Name=WP_001225281.1;gbkey=CDS;gene=ycfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309509.1;locus_tag=AC00_RS18125;product=YcfL family protein;protein_id=WP_001225281.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 44011 44652 . + . ID=gene-AC00_RS18120;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=AC00_RS18120;old_locus_tag=AC00_1243 NZ_JJLU01000044.1 Protein Homology CDS 44011 44652 . + 0 ID=cds-WP_000164439.1;Parent=gene-AC00_RS18120;Dbxref=GenBank:WP_000164439.1;Name=WP_000164439.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=AC00_RS18120;product=penicillin-binding protein activator LpoB;protein_id=WP_000164439.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 44633 45457 . + . ID=gene-AC00_RS18115;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=AC00_RS18115;old_locus_tag=AC00_1244 NZ_JJLU01000044.1 Protein Homology CDS 44633 45457 . + 0 ID=cds-WP_001116570.1;Parent=gene-AC00_RS18115;Dbxref=GenBank:WP_001116570.1;Name=WP_001116570.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309511.1;locus_tag=AC00_RS18115;product=thiamine kinase;protein_id=WP_001116570.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 45468 46493 . + . ID=gene-AC00_RS18110;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=AC00_RS18110;old_locus_tag=AC00_1245 NZ_JJLU01000044.1 Protein Homology CDS 45468 46493 . + 0 ID=cds-WP_032280740.1;Parent=gene-AC00_RS18110;Dbxref=GenBank:WP_032280740.1;Name=WP_032280740.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309512.1;locus_tag=AC00_RS18110;product=beta-N-acetylhexosaminidase;protein_id=WP_032280740.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 46516 47058 . + . ID=gene-AC00_RS18105;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=AC00_RS18105;old_locus_tag=AC00_1246 NZ_JJLU01000044.1 Protein Homology CDS 46516 47058 . + 0 ID=cds-WP_000587933.1;Parent=gene-AC00_RS18105;Dbxref=GenBank:WP_000587933.1;Name=WP_000587933.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=AC00_RS18105;product=alpha/beta hydrolase YcfP;protein_id=WP_000587933.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 47459 48763 . + . ID=gene-AC00_RS18100;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=AC00_RS18100;old_locus_tag=AC00_1248 NZ_JJLU01000044.1 Protein Homology CDS 47459 48763 . + 0 ID=cds-WP_000211045.1;Parent=gene-AC00_RS18100;Dbxref=GenBank:WP_000211045.1;Name=WP_000211045.1;gbkey=CDS;gene=ndh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=AC00_RS18100;product=NADH-quinone dehydrogenase;protein_id=WP_000211045.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 48990 49529 . + . ID=gene-AC00_RS18095;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=AC00_RS18095;old_locus_tag=AC00_1249 NZ_JJLU01000044.1 Protein Homology CDS 48990 49529 . + 0 ID=cds-WP_001043459.1;Parent=gene-AC00_RS18095;Dbxref=GenBank:WP_001043459.1;Name=WP_001043459.1;gbkey=CDS;gene=ycfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=AC00_RS18095;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001043459.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 49591 50223 . - . ID=gene-AC00_RS18090;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=AC00_RS18090;old_locus_tag=AC00_1250 NZ_JJLU01000044.1 Protein Homology CDS 49591 50223 . - 0 ID=cds-WP_000179805.1;Parent=gene-AC00_RS18090;Dbxref=GenBank:WP_000179805.1;Name=WP_000179805.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415629.4;locus_tag=AC00_RS18090;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_000179805.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 50464 50721 . + . ID=gene-AC00_RS18085;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=AC00_RS18085;old_locus_tag=AC00_1251 NZ_JJLU01000044.1 Protein Homology CDS 50464 50721 . + 0 ID=cds-WP_000800153.1;Parent=gene-AC00_RS18085;Dbxref=GenBank:WP_000800153.1;Name=WP_000800153.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=AC00_RS18085;product=multiple stress resistance protein BhsA;protein_id=WP_000800153.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 50804 51766 . - . ID=gene-AC00_RS18080;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=AC00_RS18080;old_locus_tag=AC00_1252 NZ_JJLU01000044.1 Protein Homology CDS 50804 51766 . - 0 ID=cds-WP_077757367.1;Parent=gene-AC00_RS18080;Dbxref=GenBank:WP_077757367.1;Name=WP_077757367.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415631.1;locus_tag=AC00_RS18080;product=L%2CD-transpeptidase LdtC;protein_id=WP_077757367.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 51910 55356 . - . ID=gene-AC00_RS18075;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=AC00_RS18075;old_locus_tag=AC00_1253 NZ_JJLU01000044.1 Protein Homology CDS 51910 55356 . - 0 ID=cds-WP_032280742.1;Parent=gene-AC00_RS18075;Dbxref=GenBank:WP_032280742.1;Name=WP_032280742.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415632.1;locus_tag=AC00_RS18075;product=transcription-repair coupling factor;protein_id=WP_032280742.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 55484 56557 . - . ID=gene-AC00_RS18070;Name=ycfT;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=AC00_RS18070;old_locus_tag=AC00_1254 NZ_JJLU01000044.1 Protein Homology CDS 55484 56557 . - 0 ID=cds-WP_032280743.1;Parent=gene-AC00_RS18070;Dbxref=GenBank:WP_032280743.1;Name=WP_032280743.1;gbkey=CDS;gene=ycfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707030.1;locus_tag=AC00_RS18070;product=acyltransferase family protein;protein_id=WP_032280743.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 56819 58018 . + . ID=gene-AC00_RS18065;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=AC00_RS18065;old_locus_tag=AC00_1255 NZ_JJLU01000044.1 Protein Homology CDS 56819 58018 . + 0 ID=cds-WP_032280744.1;Parent=gene-AC00_RS18065;Dbxref=GenBank:WP_032280744.1;Name=WP_032280744.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=AC00_RS18065;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_032280744.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 58011 58712 . + . ID=gene-AC00_RS18060;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AC00_RS18060;old_locus_tag=AC00_1256 NZ_JJLU01000044.1 Protein Homology CDS 58011 58712 . + 0 ID=cds-WP_001033692.1;Parent=gene-AC00_RS18060;Dbxref=GenBank:WP_001033692.1;Name=WP_001033692.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309522.2;locus_tag=AC00_RS18060;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_001033692.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 58712 59956 . + . ID=gene-AC00_RS18055;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=AC00_RS18055;old_locus_tag=AC00_1257 NZ_JJLU01000044.1 Protein Homology CDS 58712 59956 . + 0 ID=cds-WP_001251363.1;Parent=gene-AC00_RS18055;Dbxref=GenBank:WP_001251363.1;Name=WP_001251363.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415636.1;locus_tag=AC00_RS18055;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_001251363.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 59985 60896 . + . ID=gene-AC00_RS18050;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=AC00_RS18050;old_locus_tag=AC00_1258 NZ_JJLU01000044.1 Protein Homology CDS 59985 60896 . + 0 ID=cds-WP_032280746.1;Parent=gene-AC00_RS18050;Dbxref=GenBank:WP_032280746.1;Name=WP_032280746.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415637.1;locus_tag=AC00_RS18050;product=N-acetylglucosamine kinase;protein_id=WP_032280746.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 60912 61733 . + . ID=gene-AC00_RS18045;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=AC00_RS18045;old_locus_tag=AC00_1259 NZ_JJLU01000044.1 Protein Homology CDS 60912 61733 . + 0 ID=cds-WP_000952736.1;Parent=gene-AC00_RS18045;Dbxref=GenBank:WP_000952736.1;Name=WP_000952736.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309525.1;locus_tag=AC00_RS18045;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_000952736.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 61870 62655 . - . ID=gene-AC00_RS18040;Name=AC00_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS18040;old_locus_tag=AC00_1260 NZ_JJLU01000044.1 Protein Homology CDS 61870 62655 . - 0 ID=cds-WP_032280747.1;Parent=gene-AC00_RS18040;Dbxref=GenBank:WP_032280747.1;Name=WP_032280747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415639.1;locus_tag=AC00_RS18040;product=TPM domain-containing protein;protein_id=WP_032280747.1;transl_table=11 NZ_JJLU01000044.1 RefSeq pseudogene 62652 63113 . - . ID=gene-AC00_RS0124225;Name=ymfA;gbkey=Gene;gene=ymfA;gene_biotype=pseudogene;locus_tag=AC00_RS0124225;old_locus_tag=AC00_1261;pseudo=true NZ_JJLU01000044.1 Protein Homology CDS 62652 63113 . - 0 ID=cds-AC00_RS0124225;Parent=gene-AC00_RS0124225;Note=internal stop;gbkey=CDS;gene=ymfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415640.2;locus_tag=AC00_RS0124225;product=DUF3592 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 63171 64217 . - . ID=gene-AC00_RS18035;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=AC00_RS18035;old_locus_tag=AC00_1263 NZ_JJLU01000044.1 Protein Homology CDS 63171 64217 . - 0 ID=cds-WP_000759317.1;Parent=gene-AC00_RS18035;Dbxref=GenBank:WP_000759317.1;Name=WP_000759317.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=AC00_RS18035;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_000759317.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 64214 65008 . - . ID=gene-AC00_RS18030;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AC00_RS18030;old_locus_tag=AC00_1264 NZ_JJLU01000044.1 Protein Homology CDS 64214 65008 . - 0 ID=cds-WP_000580316.1;Parent=gene-AC00_RS18030;Dbxref=GenBank:WP_000580316.1;Name=WP_000580316.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309527.1;locus_tag=AC00_RS18030;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_000580316.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 65005 65862 . - . ID=gene-AC00_RS18025;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=AC00_RS18025;old_locus_tag=AC00_1265 NZ_JJLU01000044.1 Protein Homology CDS 65005 65862 . - 0 ID=cds-WP_000799401.1;Parent=gene-AC00_RS18025;Dbxref=GenBank:WP_000799401.1;Name=WP_000799401.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799378.1;locus_tag=AC00_RS18025;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_000799401.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 65846 66982 . - . ID=gene-AC00_RS18020;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AC00_RS18020;old_locus_tag=AC00_1266 NZ_JJLU01000044.1 Protein Homology CDS 65846 66982 . - 0 ID=cds-WP_000531594.1;Parent=gene-AC00_RS18020;Dbxref=GenBank:WP_000531594.1;Name=WP_000531594.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309598.1;locus_tag=AC00_RS18020;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_000531594.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 67232 68458 . + . ID=gene-AC00_RS18015;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=AC00_RS18015;old_locus_tag=AC00_1267 NZ_JJLU01000044.1 Protein Homology CDS 67232 68458 . + 0 ID=cds-WP_032280748.1;Parent=gene-AC00_RS18015;Dbxref=GenBank:WP_032280748.1;Name=WP_032280748.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309599.1;locus_tag=AC00_RS18015;product=peptidase T;protein_id=WP_032280748.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 68507 69628 . - . ID=gene-AC00_RS18010;Name=roxA;gbkey=Gene;gene=roxA;gene_biotype=protein_coding;gene_synonym=ycfD;locus_tag=AC00_RS18010;old_locus_tag=AC00_1268 NZ_JJLU01000044.1 Protein Homology CDS 68507 69628 . - 0 ID=cds-WP_001295435.1;Parent=gene-AC00_RS18010;Dbxref=GenBank:WP_001295435.1;Name=WP_001295435.1;gbkey=CDS;gene=roxA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309600.2;locus_tag=AC00_RS18010;product=[50S ribosomal protein L16]-arginine 3-hydroxylase;protein_id=WP_001295435.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 69704 71164 . - . ID=gene-AC00_RS18005;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=AC00_RS18005;old_locus_tag=AC00_1269 NZ_JJLU01000044.1 Protein Homology CDS 69704 71164 . - 0 ID=cds-WP_000735412.1;Parent=gene-AC00_RS18005;Dbxref=GenBank:WP_000735412.1;Name=WP_000735412.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415647.1;locus_tag=AC00_RS18005;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_000735412.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 71164 71835 . - . ID=gene-AC00_RS18000;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=AC00_RS18000;old_locus_tag=AC00_1270 NZ_JJLU01000044.1 Protein Homology CDS 71164 71835 . - 0 ID=cds-WP_001265481.1;Parent=gene-AC00_RS18000;Dbxref=GenBank:WP_001265481.1;Name=WP_001265481.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=AC00_RS18000;product=two-component system response regulator PhoP;protein_id=WP_001265481.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 72003 73373 . - . ID=gene-AC00_RS17995;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AC00_RS17995;old_locus_tag=AC00_1271 NZ_JJLU01000044.1 Protein Homology CDS 72003 73373 . - 0 ID=cds-WP_000423729.1;Parent=gene-AC00_RS17995;Dbxref=GenBank:WP_000423729.1;Name=WP_000423729.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=AC00_RS17995;product=adenylosuccinate lyase;protein_id=WP_000423729.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 73377 74018 . - . ID=gene-AC00_RS17990;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=AC00_RS17990;old_locus_tag=AC00_1272 NZ_JJLU01000044.1 Protein Homology CDS 73377 74018 . - 0 ID=cds-WP_001297479.1;Parent=gene-AC00_RS17990;Dbxref=GenBank:WP_001297479.1;Name=WP_001297479.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415650.1;locus_tag=AC00_RS17990;product=high frequency lysogenization protein HflD;protein_id=WP_001297479.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 74054 75160 . - . ID=gene-AC00_RS17985;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=AC00_RS17985;old_locus_tag=AC00_1273 NZ_JJLU01000044.1 Protein Homology CDS 74054 75160 . - 0 ID=cds-WP_001297484.1;Parent=gene-AC00_RS17985;Dbxref=GenBank:WP_001297484.1;Name=WP_001297484.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415651.4;locus_tag=AC00_RS17985;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001297484.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 75214 75675 . - . ID=gene-AC00_RS17980;Name=nudJ;gbkey=Gene;gene=nudJ;gene_biotype=protein_coding;locus_tag=AC00_RS17980;old_locus_tag=AC00_1274 NZ_JJLU01000044.1 Protein Homology CDS 75214 75675 . - 0 ID=cds-WP_032280749.1;Parent=gene-AC00_RS17980;Dbxref=GenBank:WP_032280749.1;Name=WP_032280749.1;gbkey=CDS;gene=nudJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309633.1;locus_tag=AC00_RS17980;product=phosphatase NudJ;protein_id=WP_032280749.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 75685 76323 . - . ID=gene-AC00_RS17975;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=AC00_RS17975;old_locus_tag=AC00_1275 NZ_JJLU01000044.1 Protein Homology CDS 75685 76323 . - 0 ID=cds-WP_032280750.1;Parent=gene-AC00_RS17975;Dbxref=GenBank:WP_032280750.1;Name=WP_032280750.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000873386.1;locus_tag=AC00_RS17975;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_032280750.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 76656 76991 . - . ID=gene-AC00_RS17970;Name=AC00_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17970;old_locus_tag=AC00_1276 NZ_JJLU01000044.1 Protein Homology CDS 76656 76991 . - 0 ID=cds-WP_000246191.1;Parent=gene-AC00_RS17970;Dbxref=GenBank:WP_000246191.1;Name=WP_000246191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000246191.1;locus_tag=AC00_RS17970;product=DUF1493 family protein;protein_id=WP_000246191.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 76991 77440 . - . ID=gene-AC00_RS0124235;Name=AC00_RS0124235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124235 NZ_JJLU01000044.1 Protein Homology CDS 76991 77440 . - 0 ID=cds-WP_032280751.1;Parent=gene-AC00_RS0124235;Dbxref=GenBank:WP_032280751.1;Name=WP_032280751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135321903.1;locus_tag=AC00_RS0124235;product=STM2901 family protein;protein_id=WP_032280751.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 78027 79277 . + . ID=gene-AC00_RS17965;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=AC00_RS17965;old_locus_tag=AC00_1278 NZ_JJLU01000044.1 Protein Homology CDS 78027 79277 . + 0 ID=cds-WP_000444487.1;Parent=gene-AC00_RS17965;Dbxref=GenBank:WP_000444487.1;Name=WP_000444487.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=AC00_RS17965;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_000444487.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 79380 79703 . - . ID=gene-AC00_RS0124240;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=AC00_RS0124240 NZ_JJLU01000044.1 Protein Homology CDS 79380 79703 . - 0 ID=cds-WP_000872356.1;Parent=gene-AC00_RS0124240;Dbxref=GenBank:WP_000872356.1;Name=WP_000872356.1;Ontology_term=GO:0043856,GO:0005737;gbkey=CDS;gene=iraM;go_component=cytoplasm|0005737||IEA;go_function=anti-sigma factor antagonist activity|0043856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415678.1;locus_tag=AC00_RS0124240;product=anti-adapter protein IraM;protein_id=WP_000872356.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 79956 80000 . - . ID=gene-AC00_RS30865;Name=AC00_RS30865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30865 NZ_JJLU01000044.1 Protein Homology CDS 79956 80000 . - 0 ID=cds-WP_176082307.1;Parent=gene-AC00_RS30865;Dbxref=GenBank:WP_176082307.1;Name=WP_176082307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518766.1;locus_tag=AC00_RS30865;product=hypothetical protein;protein_id=WP_176082307.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 80236 80346 . - . ID=gene-AC00_RS30235;Name=AC00_RS30235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30235 NZ_JJLU01000044.1 Protein Homology CDS 80236 80346 . - 0 ID=cds-WP_032143442.1;Parent=gene-AC00_RS30235;Dbxref=GenBank:WP_032143442.1;Name=WP_032143442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518767.1;locus_tag=AC00_RS30235;product=hypothetical protein;protein_id=WP_032143442.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 80399 80803 . - . ID=gene-AC00_RS17960;Name=ycgX;gbkey=Gene;gene=ycgX;gene_biotype=protein_coding;locus_tag=AC00_RS17960;old_locus_tag=AC00_1279 NZ_JJLU01000044.1 Protein Homology CDS 80399 80803 . - 0 ID=cds-WP_032280753.1;Parent=gene-AC00_RS17960;Dbxref=GenBank:WP_032280753.1;Name=WP_032280753.1;gbkey=CDS;gene=ycgX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415679.1;locus_tag=AC00_RS17960;product=DUF1398 domain-containing protein;protein_id=WP_032280753.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 81024 81755 . - . ID=gene-AC00_RS17955;Name=bluR;gbkey=Gene;gene=bluR;gene_biotype=protein_coding;locus_tag=AC00_RS17955;old_locus_tag=AC00_1280 NZ_JJLU01000044.1 Protein Homology CDS 81024 81755 . - 0 ID=cds-WP_000332300.1;Parent=gene-AC00_RS17955;Dbxref=GenBank:WP_000332300.1;Name=WP_000332300.1;gbkey=CDS;gene=bluR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415680.1;locus_tag=AC00_RS17955;product=DNA-binding transcriptional repressor BluR;protein_id=WP_000332300.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 81960 83171 . - . ID=gene-AC00_RS17950;Name=bluF;gbkey=Gene;gene=bluF;gene_biotype=protein_coding;locus_tag=AC00_RS17950;old_locus_tag=AC00_1281 NZ_JJLU01000044.1 Protein Homology CDS 81960 83171 . - 0 ID=cds-WP_001536901.1;Parent=gene-AC00_RS17950;Dbxref=GenBank:WP_001536901.1;Name=WP_001536901.1;gbkey=CDS;gene=bluF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415681.1;locus_tag=AC00_RS17950;product=blue light-responsive regulator BluF;protein_id=WP_001536901.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 83485 83721 . + . ID=gene-AC00_RS0124250;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=AC00_RS0124250 NZ_JJLU01000044.1 Protein Homology CDS 83485 83721 . + 0 ID=cds-WP_000554146.1;Parent=gene-AC00_RS0124250;Dbxref=GenBank:WP_000554146.1;Name=WP_000554146.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415682.1;locus_tag=AC00_RS0124250;product=regulatory protein YcgZ;protein_id=WP_000554146.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 83764 84036 . + . ID=gene-AC00_RS0124255;Name=ymgA;gbkey=Gene;gene=ymgA;gene_biotype=protein_coding;locus_tag=AC00_RS0124255 NZ_JJLU01000044.1 Protein Homology CDS 83764 84036 . + 0 ID=cds-WP_000858015.1;Parent=gene-AC00_RS0124255;Dbxref=GenBank:WP_000858015.1;Name=WP_000858015.1;gbkey=CDS;gene=ymgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415683.1;locus_tag=AC00_RS0124255;product=hypothetical protein;protein_id=WP_000858015.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 84065 84331 . + . ID=gene-AC00_RS17945;Name=ariR;gbkey=Gene;gene=ariR;gene_biotype=protein_coding;gene_synonym=ymgB;locus_tag=AC00_RS17945;old_locus_tag=AC00_1283 NZ_JJLU01000044.1 Protein Homology CDS 84065 84331 . + 0 ID=cds-WP_000888778.1;Parent=gene-AC00_RS17945;Dbxref=GenBank:WP_000888778.1;Name=WP_000888778.1;gbkey=CDS;gene=ariR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415684.1;locus_tag=AC00_RS17945;product=biofilm/acid-resistance regulator AriR;protein_id=WP_000888778.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 84444 84692 . + . ID=gene-AC00_RS0124260;Name=ymgC;gbkey=Gene;gene=ymgC;gene_biotype=protein_coding;locus_tag=AC00_RS0124260;old_locus_tag=AC00_1284 NZ_JJLU01000044.1 Protein Homology CDS 84444 84692 . + 0 ID=cds-WP_001065752.1;Parent=gene-AC00_RS0124260;Dbxref=GenBank:WP_001065752.1;Name=WP_001065752.1;gbkey=CDS;gene=ymgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415685.1;locus_tag=AC00_RS0124260;product=protein YmgC;protein_id=WP_001065752.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 85028 86551 . + . ID=gene-AC00_RS0124265;Name=pdeG;gbkey=Gene;gene=pdeG;gene_biotype=protein_coding;locus_tag=AC00_RS0124265 NZ_JJLU01000044.1 Protein Homology CDS 85028 86551 . + 0 ID=cds-WP_032280754.1;Parent=gene-AC00_RS0124265;Dbxref=GenBank:WP_032280754.1;Name=WP_032280754.1;gbkey=CDS;gene=pdeG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415686.2;locus_tag=AC00_RS0124265;product=EAL domain-containing protein;protein_id=WP_032280754.1;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 86683 86901 . + . ID=gene-AC00_RS0124270;Name=ymgF;gbkey=Gene;gene=ymgF;gene_biotype=protein_coding;locus_tag=AC00_RS0124270 NZ_JJLU01000044.1 Protein Homology CDS 86683 86901 . + 0 ID=cds-WP_001299921.1;Parent=gene-AC00_RS0124270;Dbxref=GenBank:WP_001299921.1;Name=WP_001299921.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ymgF;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588447.1;locus_tag=AC00_RS0124270;product=cell division-associated protein YmgF;protein_id=WP_001299921.1;transl_table=11 NZ_JJLU01000044.1 RefSeq pseudogene 87352 88339 . + . ID=gene-AC00_RS31530;Name=AC00_RS31530;end_range=88339,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31530;partial=true;pseudo=true NZ_JJLU01000044.1 Protein Homology CDS 87352 88339 . + 0 ID=cds-AC00_RS31530;Parent=gene-AC00_RS31530;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=88339,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AC00_RS31530;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000044.1 RefSeq gene 88482 88719 . - . ID=gene-AC00_RS0124290;Name=AC00_RS0124290;end_range=88719,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124290;partial=true NZ_JJLU01000044.1 Protein Homology CDS 88482 88719 . - 1 ID=cds-WP_032288185.1;Parent=gene-AC00_RS0124290;Dbxref=GenBank:WP_032288185.1;Name=WP_032288185.1;end_range=88719,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS0124290;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032288185.1;transl_table=11 ##sequence-region NZ_JJLU01000045.1 1 41538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000045.1 RefSeq region 1 41538 . + . ID=NZ_JJLU01000045.1:1..41538;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000045.1 RefSeq gene 1 271 . - . ID=gene-AC00_RS17940;Name=AC00_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17940;old_locus_tag=AC00_1290;partial=true;start_range=.,1 NZ_JJLU01000045.1 Protein Homology CDS 1 271 . - 0 ID=cds-WP_000019387.1;Parent=gene-AC00_RS17940;Dbxref=GenBank:WP_000019387.1;Name=WP_000019387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS17940;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_000019387.1;start_range=.,1;transl_table=11 NZ_JJLU01000045.1 RefSeq pseudogene 339 1973 . + . ID=gene-AC00_RS0124295;Name=ycgH;gbkey=Gene;gene=ycgH;gene_biotype=pseudogene;locus_tag=AC00_RS0124295;partial=true;pseudo=true;start_range=.,339 NZ_JJLU01000045.1 Protein Homology CDS 339 1973 . + 0 ID=cds-AC00_RS0124295;Parent=gene-AC00_RS0124295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=ycgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768545.1;locus_tag=AC00_RS0124295;partial=true;product=autotransporter YcgH;pseudo=true;start_range=.,339;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 2029 2364 . - . ID=gene-AC00_RS17935;Name=ymgD;gbkey=Gene;gene=ymgD;gene_biotype=protein_coding;locus_tag=AC00_RS17935;old_locus_tag=AC00_1292 NZ_JJLU01000045.1 Protein Homology CDS 2029 2364 . - 0 ID=cds-WP_000979977.1;Parent=gene-AC00_RS17935;Dbxref=GenBank:WP_000979977.1;Name=WP_000979977.1;gbkey=CDS;gene=ymgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707068.1;locus_tag=AC00_RS17935;product=YmgD family protein;protein_id=WP_000979977.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 2368 2712 . - . ID=gene-AC00_RS17930;Name=ymgG;gbkey=Gene;gene=ymgG;gene_biotype=protein_coding;locus_tag=AC00_RS17930;old_locus_tag=AC00_1293 NZ_JJLU01000045.1 Protein Homology CDS 2368 2712 . - 0 ID=cds-WP_000726974.1;Parent=gene-AC00_RS17930;Dbxref=GenBank:WP_000726974.1;Name=WP_000726974.1;gbkey=CDS;gene=ymgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415690.5;locus_tag=AC00_RS17930;product=YMGG-like glycine zipper-containing protein;protein_id=WP_000726974.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 2714 2887 . - . ID=gene-AC00_RS0124300;Name=ymgI;gbkey=Gene;gene=ymgI;gene_biotype=protein_coding;locus_tag=AC00_RS0124300 NZ_JJLU01000045.1 Protein Homology CDS 2714 2887 . - 0 ID=cds-WP_000122462.1;Parent=gene-AC00_RS0124300;Dbxref=GenBank:WP_000122462.1;Name=WP_000122462.1;gbkey=CDS;gene=ymgI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165314.1;locus_tag=AC00_RS0124300;product=protein YmgI;protein_id=WP_000122462.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 2988 3173 . + . ID=gene-AC00_RS27375;Name=ymgJ;gbkey=Gene;gene=ymgJ;gene_biotype=protein_coding;locus_tag=AC00_RS27375 NZ_JJLU01000045.1 Protein Homology CDS 2988 3173 . + 0 ID=cds-WP_001328621.1;Parent=gene-AC00_RS27375;Dbxref=GenBank:WP_001328621.1;Name=WP_001328621.1;gbkey=CDS;gene=ymgJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165315.1;locus_tag=AC00_RS27375;product=protein YmgJ;protein_id=WP_001328621.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 3134 3253 . + . ID=gene-AC00_RS30240;Name=AC00_RS30240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30240;old_locus_tag=AC00_1294 NZ_JJLU01000045.1 Protein Homology CDS 3134 3253 . + 0 ID=cds-WP_001131446.1;Parent=gene-AC00_RS30240;Dbxref=GenBank:WP_001131446.1;Name=WP_001131446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001131457.1;locus_tag=AC00_RS30240;product=hypothetical protein;protein_id=WP_001131446.1;transl_table=11 NZ_JJLU01000045.1 RefSeq pseudogene 3288 3632 . + . ID=gene-AC00_RS0124305;Name=AC00_RS0124305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124305;partial=true;pseudo=true;start_range=.,3288 NZ_JJLU01000045.1 Protein Homology CDS 3288 3632 . + 0 ID=cds-AC00_RS0124305;Parent=gene-AC00_RS0124305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311542.2;locus_tag=AC00_RS0124305;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,3288;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 4011 4277 . - . ID=gene-AC00_RS17925;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AC00_RS17925;old_locus_tag=AC00_1296 NZ_JJLU01000045.1 Protein Homology CDS 4011 4277 . - 0 ID=cds-WP_001185665.1;Parent=gene-AC00_RS17925;Dbxref=GenBank:WP_001185665.1;Name=WP_001185665.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309695.1;locus_tag=AC00_RS17925;product=cell division topological specificity factor MinE;protein_id=WP_001185665.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 4281 5093 . - . ID=gene-AC00_RS17920;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AC00_RS17920;old_locus_tag=AC00_1297 NZ_JJLU01000045.1 Protein Homology CDS 4281 5093 . - 0 ID=cds-WP_000101055.1;Parent=gene-AC00_RS17920;Dbxref=GenBank:WP_000101055.1;Name=WP_000101055.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=AC00_RS17920;product=septum site-determining protein MinD;protein_id=WP_000101055.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 5117 5812 . - . ID=gene-AC00_RS17915;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AC00_RS17915;old_locus_tag=AC00_1298 NZ_JJLU01000045.1 Protein Homology CDS 5117 5812 . - 0 ID=cds-WP_032223756.1;Parent=gene-AC00_RS17915;Dbxref=GenBank:WP_032223756.1;Name=WP_032223756.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=AC00_RS17915;product=septum site-determining protein MinC;protein_id=WP_032223756.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 6332 6700 . + . ID=gene-AC00_RS17910;Name=ycgJ;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=AC00_RS17910;old_locus_tag=AC00_1299 NZ_JJLU01000045.1 Protein Homology CDS 6332 6700 . + 0 ID=cds-WP_032280758.1;Parent=gene-AC00_RS17910;Dbxref=GenBank:WP_032280758.1;Name=WP_032280758.1;gbkey=CDS;gene=ycgJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415695.1;locus_tag=AC00_RS17910;product=YcgJ family protein;protein_id=WP_032280758.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 6803 7204 . - . ID=gene-AC00_RS17905;Name=pliG;gbkey=Gene;gene=pliG;gene_biotype=protein_coding;locus_tag=AC00_RS17905;old_locus_tag=AC00_1300 NZ_JJLU01000045.1 Protein Homology CDS 6803 7204 . - 0 ID=cds-WP_000695220.1;Parent=gene-AC00_RS17905;Dbxref=GenBank:WP_000695220.1;Name=WP_000695220.1;gbkey=CDS;gene=pliG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309699.1;locus_tag=AC00_RS17905;product=g-type lysoyme inhibitor PliG;protein_id=WP_000695220.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 7445 7738 . + . ID=gene-AC00_RS17895;Name=AC00_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17895;old_locus_tag=AC00_1302 NZ_JJLU01000045.1 Protein Homology CDS 7445 7738 . + 0 ID=cds-WP_001295992.1;Parent=gene-AC00_RS17895;Dbxref=GenBank:WP_001295992.1;Name=WP_001295992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309701.2;locus_tag=AC00_RS17895;product=YcgL domain-containing protein;protein_id=WP_001295992.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 7810 8469 . + . ID=gene-AC00_RS17890;Name=ycgM;gbkey=Gene;gene=ycgM;gene_biotype=protein_coding;locus_tag=AC00_RS17890;old_locus_tag=AC00_1303 NZ_JJLU01000045.1 Protein Homology CDS 7810 8469 . + 0 ID=cds-WP_000284277.1;Parent=gene-AC00_RS17890;Dbxref=GenBank:WP_000284277.1;Name=WP_000284277.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ycgM;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309702.1;locus_tag=AC00_RS17890;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_000284277.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 8561 9007 . + . ID=gene-AC00_RS17885;Name=ycgN;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=AC00_RS17885;old_locus_tag=AC00_1304 NZ_JJLU01000045.1 Protein Homology CDS 8561 9007 . + 0 ID=cds-WP_001306825.1;Parent=gene-AC00_RS17885;Dbxref=GenBank:WP_001306825.1;Name=WP_001306825.1;gbkey=CDS;gene=ycgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309703.5;locus_tag=AC00_RS17885;product=YcgN family cysteine cluster protein;protein_id=WP_001306825.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 9214 10125 . - . ID=gene-AC00_RS17880;Name=hlyE;gbkey=Gene;gene=hlyE;gene_biotype=protein_coding;locus_tag=AC00_RS17880;old_locus_tag=AC00_1305 NZ_JJLU01000045.1 Protein Homology CDS 9214 10125 . - 0 ID=cds-WP_032280771.1;Parent=gene-AC00_RS17880;Dbxref=GenBank:WP_032280771.1;Name=WP_032280771.1;Ontology_term=GO:0044179,GO:0090729;gbkey=CDS;gene=hlyE;go_function=toxin activity|0090729||IEA;go_process=hemolysis in another organism|0044179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415700.4;locus_tag=AC00_RS17880;product=hemolysin HlyE;protein_id=WP_032280771.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 10498 10917 . + . ID=gene-AC00_RS17875;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=AC00_RS17875;old_locus_tag=AC00_1306 NZ_JJLU01000045.1 Protein Homology CDS 10498 10917 . + 0 ID=cds-WP_000897378.1;Parent=gene-AC00_RS17875;Dbxref=GenBank:WP_000897378.1;Name=WP_000897378.1;gbkey=CDS;gene=umuD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309705.1;locus_tag=AC00_RS17875;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_000897378.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 10917 12185 . + . ID=gene-AC00_RS17870;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=AC00_RS17870;old_locus_tag=AC00_1307 NZ_JJLU01000045.1 Protein Homology CDS 10917 12185 . + 0 ID=cds-WP_032280759.1;Parent=gene-AC00_RS17870;Dbxref=GenBank:WP_032280759.1;Name=WP_032280759.1;gbkey=CDS;gene=umuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415702.1;locus_tag=AC00_RS17870;product=DNA polymerase V catalytic protein;protein_id=WP_032280759.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 12231 12761 . - . ID=gene-AC00_RS17865;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=AC00_RS17865;old_locus_tag=AC00_1308 NZ_JJLU01000045.1 Protein Homology CDS 12231 12761 . - 0 ID=cds-WP_000943459.1;Parent=gene-AC00_RS17865;Dbxref=GenBank:WP_000943459.1;Name=WP_000943459.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309707.1;locus_tag=AC00_RS17865;product=disulfide bond formation protein DsbB;protein_id=WP_000943459.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 12907 14448 . - . ID=gene-AC00_RS17860;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AC00_RS17860;old_locus_tag=AC00_1309 NZ_JJLU01000045.1 Protein Homology CDS 12907 14448 . - 0 ID=cds-WP_032280760.1;Parent=gene-AC00_RS17860;Dbxref=GenBank:WP_032280760.1;Name=WP_032280760.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309708.1;locus_tag=AC00_RS17860;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_032280760.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 14670 15389 . + . ID=gene-AC00_RS17855;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=AC00_RS17855;old_locus_tag=AC00_1310 NZ_JJLU01000045.1 Protein Homology CDS 14670 15389 . + 0 ID=cds-WP_000234823.1;Parent=gene-AC00_RS17855;Dbxref=GenBank:WP_000234823.1;Name=WP_000234823.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=AC00_RS17855;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_000234823.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 15440 16972 . - . ID=gene-AC00_RS17850;Name=ycgB;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=AC00_RS17850;old_locus_tag=AC00_1311 NZ_JJLU01000045.1 Protein Homology CDS 15440 16972 . - 0 ID=cds-WP_000190855.1;Parent=gene-AC00_RS17850;Dbxref=GenBank:WP_000190855.1;Name=WP_000190855.1;gbkey=CDS;gene=ycgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309710.1;locus_tag=AC00_RS17850;product=SpoVR family protein;protein_id=WP_000190855.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 17302 18600 . + . ID=gene-AC00_RS17845;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=AC00_RS17845;old_locus_tag=AC00_1312 NZ_JJLU01000045.1 Protein Homology CDS 17302 18600 . + 0 ID=cds-WP_032280761.1;Parent=gene-AC00_RS17845;Dbxref=GenBank:WP_032280761.1;Name=WP_032280761.1;gbkey=CDS;gene=dadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=AC00_RS17845;product=D-amino acid dehydrogenase;protein_id=WP_032280761.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 18610 19680 . + . ID=gene-AC00_RS17840;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=AC00_RS17840;old_locus_tag=AC00_1313 NZ_JJLU01000045.1 Protein Homology CDS 18610 19680 . + 0 ID=cds-WP_032280762.1;Parent=gene-AC00_RS17840;Dbxref=GenBank:WP_032280762.1;Name=WP_032280762.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415708.1;locus_tag=AC00_RS17840;product=catabolic alanine racemase DadX;protein_id=WP_032280762.1;transl_table=11 NZ_JJLU01000045.1 RefSeq pseudogene 19849 21285 . - . ID=gene-AC00_RS0124310;Name=AC00_RS0124310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124310;old_locus_tag=AC00_1314;pseudo=true NZ_JJLU01000045.1 Protein Homology CDS 19849 21285 . - 0 ID=cds-AC00_RS0124310;Parent=gene-AC00_RS0124310;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243131.1;locus_tag=AC00_RS0124310;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 21624 21785 . - . ID=gene-AC00_RS30870;Name=AC00_RS30870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30870 NZ_JJLU01000045.1 Protein Homology CDS 21624 21785 . - 0 ID=cds-WP_001312759.1;Parent=gene-AC00_RS30870;Dbxref=GenBank:WP_001312759.1;Name=WP_001312759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005023590.1;locus_tag=AC00_RS30870;product=hypothetical protein;protein_id=WP_001312759.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 21888 22034 . + . ID=gene-AC00_RS31700;Name=AC00_RS31700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31700 NZ_JJLU01000045.1 Protein Homology CDS 21888 22034 . + 0 ID=cds-WP_419867124.1;Parent=gene-AC00_RS31700;Dbxref=GenBank:WP_419867124.1;Name=WP_419867124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049075.1;locus_tag=AC00_RS31700;product=hypothetical protein;protein_id=WP_419867124.1;transl_table=11 NZ_JJLU01000045.1 RefSeq pseudogene 21972 23642 . - . ID=gene-AC00_RS17835;Name=cvrA;gbkey=Gene;gene=cvrA;gene_biotype=pseudogene;locus_tag=AC00_RS17835;old_locus_tag=AC00_1317;partial=true;pseudo=true;start_range=.,21972 NZ_JJLU01000045.1 Protein Homology CDS 21972 23642 . - 0 ID=cds-AC00_RS17835;Parent=gene-AC00_RS17835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;gbkey=CDS;gene=cvrA;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=AC00_RS17835;partial=true;product=potassium/proton antiporter;pseudo=true;start_range=.,21972;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 23737 24651 . - . ID=gene-AC00_RS17830;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=AC00_RS17830;old_locus_tag=AC00_1318 NZ_JJLU01000045.1 Protein Homology CDS 23737 24651 . - 0 ID=cds-WP_032280763.1;Parent=gene-AC00_RS17830;Dbxref=GenBank:WP_032280763.1;Name=WP_032280763.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309715.2;locus_tag=AC00_RS17830;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_032280763.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 24751 25362 . + . ID=gene-AC00_RS17825;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=AC00_RS17825;old_locus_tag=AC00_1319 NZ_JJLU01000045.1 Protein Homology CDS 24751 25362 . + 0 ID=cds-WP_001295616.1;Parent=gene-AC00_RS17825;Dbxref=GenBank:WP_001295616.1;Name=WP_001295616.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309714.2;locus_tag=AC00_RS17825;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_001295616.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 25364 26098 . - . ID=gene-AC00_RS17820;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=AC00_RS17820;old_locus_tag=AC00_1320 NZ_JJLU01000045.1 Protein Homology CDS 25364 26098 . - 0 ID=cds-WP_032280764.1;Parent=gene-AC00_RS17820;Dbxref=GenBank:WP_032280764.1;Name=WP_032280764.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415712.1;locus_tag=AC00_RS17820;product=flagellar brake protein YcgR;protein_id=WP_032280764.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 26299 26553 . + . ID=gene-AC00_RS17815;Name=ymgE;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=AC00_RS17815;old_locus_tag=AC00_1321 NZ_JJLU01000045.1 Protein Homology CDS 26299 26553 . + 0 ID=cds-WP_000511315.1;Parent=gene-AC00_RS17815;Dbxref=GenBank:WP_000511315.1;Name=WP_000511315.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ymgE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309719.1;locus_tag=AC00_RS17815;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000511315.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 26603 28573 . - . ID=gene-AC00_RS17810;Name=AC00_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17810;old_locus_tag=AC00_1322 NZ_JJLU01000045.1 Protein Homology CDS 26603 28573 . - 0 ID=cds-WP_032280765.1;Parent=gene-AC00_RS17810;Dbxref=GenBank:WP_032280765.1;Name=WP_032280765.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309720.1;locus_tag=AC00_RS17810;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_032280765.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 28599 29453 . - . ID=gene-AC00_RS17805;Name=modD;gbkey=Gene;gene=modD;gene_biotype=protein_coding;locus_tag=AC00_RS17805;old_locus_tag=AC00_1323 NZ_JJLU01000045.1 Protein Homology CDS 28599 29453 . - 0 ID=cds-WP_000576835.1;Parent=gene-AC00_RS17805;Dbxref=GenBank:WP_000576835.1;Name=WP_000576835.1;Ontology_term=GO:0004514;gbkey=CDS;gene=modD;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309721.1;locus_tag=AC00_RS17805;product=ModD protein;protein_id=WP_000576835.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 29450 30262 . - . ID=gene-AC00_RS17800;Name=AC00_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17800;old_locus_tag=AC00_1324 NZ_JJLU01000045.1 Protein Homology CDS 29450 30262 . - 0 ID=cds-WP_032223771.1;Parent=gene-AC00_RS17800;Dbxref=GenBank:WP_032223771.1;Name=WP_032223771.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000903984.1;locus_tag=AC00_RS17800;product=class I SAM-dependent methyltransferase;protein_id=WP_032223771.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 30272 31030 . - . ID=gene-AC00_RS17795;Name=AC00_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17795;old_locus_tag=AC00_1325 NZ_JJLU01000045.1 Protein Homology CDS 30272 31030 . - 0 ID=cds-WP_000173324.1;Parent=gene-AC00_RS17795;Dbxref=GenBank:WP_000173324.1;Name=WP_000173324.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309724.1;locus_tag=AC00_RS17795;product=ABC transporter ATP-binding protein;protein_id=WP_000173324.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 31027 32007 . - . ID=gene-AC00_RS17790;Name=AC00_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17790;old_locus_tag=AC00_1326 NZ_JJLU01000045.1 Protein Homology CDS 31027 32007 . - 0 ID=cds-WP_032280766.1;Parent=gene-AC00_RS17790;Dbxref=GenBank:WP_032280766.1;Name=WP_032280766.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309725.1;locus_tag=AC00_RS17790;product=FecCD family ABC transporter permease;protein_id=WP_032280766.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 32007 33029 . - . ID=gene-AC00_RS17785;Name=AC00_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17785;old_locus_tag=AC00_1327 NZ_JJLU01000045.1 Protein Homology CDS 32007 33029 . - 0 ID=cds-WP_001536890.1;Parent=gene-AC00_RS17785;Dbxref=GenBank:WP_001536890.1;Name=WP_001536890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309726.1;locus_tag=AC00_RS17785;product=iron ABC transporter substrate-binding protein;protein_id=WP_001536890.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 33373 35070 . - . ID=gene-AC00_RS17780;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=AC00_RS17780;old_locus_tag=AC00_1328 NZ_JJLU01000045.1 Protein Homology CDS 33373 35070 . - 0 ID=cds-WP_001612849.1;Parent=gene-AC00_RS17780;Dbxref=GenBank:WP_001612849.1;Name=WP_001612849.1;gbkey=CDS;gene=treA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415715.1;locus_tag=AC00_RS17780;product=alpha%2Calpha-trehalase;protein_id=WP_001612849.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 35390 36808 . - . ID=gene-AC00_RS17775;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=AC00_RS17775;old_locus_tag=AC00_1329 NZ_JJLU01000045.1 Protein Homology CDS 35390 36808 . - 0 ID=cds-WP_001536888.1;Parent=gene-AC00_RS17775;Dbxref=GenBank:WP_001536888.1;Name=WP_001536888.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415716.4;locus_tag=AC00_RS17775;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001536888.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 36819 37451 . - . ID=gene-AC00_RS17770;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=AC00_RS17770;old_locus_tag=AC00_1330 NZ_JJLU01000045.1 Protein Homology CDS 36819 37451 . - 0 ID=cds-WP_032280767.1;Parent=gene-AC00_RS17770;Dbxref=GenBank:WP_032280767.1;Name=WP_032280767.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707108.2;locus_tag=AC00_RS17770;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_032280767.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 37462 38532 . - . ID=gene-AC00_RS17765;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=AC00_RS17765;old_locus_tag=AC00_1331 NZ_JJLU01000045.1 Protein Homology CDS 37462 38532 . - 0 ID=cds-WP_000733714.1;Parent=gene-AC00_RS17765;Dbxref=GenBank:WP_000733714.1;Name=WP_000733714.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309732.4;locus_tag=AC00_RS17765;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_000733714.1;transl_table=11 NZ_JJLU01000045.1 RefSeq gene 38760 40679 . + . ID=gene-AC00_RS17760;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=AC00_RS17760;old_locus_tag=AC00_1332 NZ_JJLU01000045.1 Protein Homology CDS 38760 40679 . + 0 ID=cds-WP_032280768.1;Parent=gene-AC00_RS17760;Dbxref=GenBank:WP_032280768.1;Name=WP_032280768.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415719.2;locus_tag=AC00_RS17760;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_032280768.1;transl_table=11 NZ_JJLU01000045.1 RefSeq pseudogene 40779 41240 . - . ID=gene-AC00_RS17755;Name=AC00_RS17755;end_range=41240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17755;old_locus_tag=AC00_1333;partial=true;pseudo=true NZ_JJLU01000045.1 Protein Homology CDS 40779 41240 . - 0 ID=cds-AC00_RS17755;Parent=gene-AC00_RS17755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;end_range=41240,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415720.1;locus_tag=AC00_RS17755;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000045.1 RefSeq pseudogene 41244 41538 . - . ID=gene-AC00_RS17750;Name=AC00_RS17750;end_range=41538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17750;old_locus_tag=AC00_1334;partial=true;pseudo=true NZ_JJLU01000045.1 Protein Homology CDS 41244 41538 . - 1 ID=cds-AC00_RS17750;Parent=gene-AC00_RS17750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=41538,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS17750;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000046.1 1 61930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000046.1 RefSeq region 1 61930 . + . ID=NZ_JJLU01000046.1:1..61930;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000046.1 RefSeq gene 1 247 . - . ID=gene-AC00_RS0124315;Name=AC00_RS0124315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124315;old_locus_tag=AC00_1335;partial=true;start_range=.,1 NZ_JJLU01000046.1 Protein Homology CDS 1 247 . - 0 ID=cds-WP_001473862.1;Parent=gene-AC00_RS0124315;Dbxref=GenBank:WP_001473862.1;Name=WP_001473862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124315;partial=true;product=IS1-like element transposase;protein_id=WP_001473862.1;start_range=.,1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 771 1862 . - . ID=gene-AC00_RS17745;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AC00_RS17745;old_locus_tag=AC00_1336 NZ_JJLU01000046.1 Protein Homology CDS 771 1862 . - 0 ID=cds-WP_032280772.1;Parent=gene-AC00_RS17745;Dbxref=GenBank:WP_032280772.1;Name=WP_032280772.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=AC00_RS17745;product=redox-regulated ATPase YchF;protein_id=WP_032280772.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 1979 2563 . - . ID=gene-AC00_RS17740;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AC00_RS17740;old_locus_tag=AC00_1337 NZ_JJLU01000046.1 Protein Homology CDS 1979 2563 . - 0 ID=cds-WP_000152933.1;Parent=gene-AC00_RS17740;Dbxref=GenBank:WP_000152933.1;Name=WP_000152933.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=AC00_RS17740;product=aminoacyl-tRNA hydrolase;protein_id=WP_000152933.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 2841 3119 . + . ID=gene-AC00_RS17735;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=AC00_RS17735;old_locus_tag=AC00_1338 NZ_JJLU01000046.1 Protein Homology CDS 2841 3119 . + 0 ID=cds-WP_000823885.1;Parent=gene-AC00_RS17735;Dbxref=GenBank:WP_000823885.1;Name=WP_000823885.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309737.1;locus_tag=AC00_RS17735;product=stress-induced protein YchH;protein_id=WP_000823885.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 3174 4853 . - . ID=gene-AC00_RS17730;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=AC00_RS17730;old_locus_tag=AC00_1339 NZ_JJLU01000046.1 Protein Homology CDS 3174 4853 . - 0 ID=cds-WP_071999228.1;Parent=gene-AC00_RS17730;Dbxref=GenBank:WP_071999228.1;Name=WP_071999228.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415724.2;locus_tag=AC00_RS17730;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_071999228.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 4978 5925 . - . ID=gene-AC00_RS17725;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=AC00_RS17725;old_locus_tag=AC00_1340 NZ_JJLU01000046.1 Protein Homology CDS 4978 5925 . - 0 ID=cds-WP_001298109.1;Parent=gene-AC00_RS17725;Dbxref=GenBank:WP_001298109.1;Name=WP_001298109.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=AC00_RS17725;product=ribose-phosphate diphosphokinase;protein_id=WP_001298109.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 6076 6927 . - . ID=gene-AC00_RS17720;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AC00_RS17720;old_locus_tag=AC00_1341 NZ_JJLU01000046.1 Protein Homology CDS 6076 6927 . - 0 ID=cds-WP_001260332.1;Parent=gene-AC00_RS17720;Dbxref=GenBank:WP_001260332.1;Name=WP_001260332.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309740.1;locus_tag=AC00_RS17720;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001260332.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 6927 7550 . - . ID=gene-AC00_RS17715;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AC00_RS17715;old_locus_tag=AC00_1342 NZ_JJLU01000046.1 Protein Homology CDS 6927 7550 . - 0 ID=cds-WP_023307921.1;Parent=gene-AC00_RS17715;Dbxref=GenBank:WP_023307921.1;Name=WP_023307921.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309741.1;locus_tag=AC00_RS17715;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_023307921.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 7764 9020 . + . ID=gene-AC00_RS17710;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=AC00_RS17710;old_locus_tag=AC00_1343 NZ_JJLU01000046.1 Protein Homology CDS 7764 9020 . + 0 ID=cds-WP_000173196.1;Parent=gene-AC00_RS17710;Dbxref=GenBank:WP_000173196.1;Name=WP_000173196.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=AC00_RS17710;product=glutamyl-tRNA reductase;protein_id=WP_000173196.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 9062 10144 . + . ID=gene-AC00_RS17705;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AC00_RS17705;old_locus_tag=AC00_1344 NZ_JJLU01000046.1 Protein Homology CDS 9062 10144 . + 0 ID=cds-WP_000804726.1;Parent=gene-AC00_RS17705;Dbxref=GenBank:WP_000804726.1;Name=WP_000804726.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=AC00_RS17705;product=peptide chain release factor 1;protein_id=WP_000804726.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 10144 10977 . + . ID=gene-AC00_RS17700;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=AC00_RS17700;old_locus_tag=AC00_1345 NZ_JJLU01000046.1 Protein Homology CDS 10144 10977 . + 0 ID=cds-WP_000456467.1;Parent=gene-AC00_RS17700;Dbxref=GenBank:WP_000456467.1;Name=WP_000456467.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415730.1;locus_tag=AC00_RS17700;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_000456467.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 10974 11366 . + . ID=gene-AC00_RS17695;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=AC00_RS17695;old_locus_tag=AC00_1346 NZ_JJLU01000046.1 Protein Homology CDS 10974 11366 . + 0 ID=cds-WP_000200378.1;Parent=gene-AC00_RS17695;Dbxref=GenBank:WP_000200378.1;Name=WP_000200378.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707122.1;locus_tag=AC00_RS17695;product=invasion regulator SirB2;protein_id=WP_000200378.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 11370 12179 . + . ID=gene-AC00_RS17690;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=AC00_RS17690;old_locus_tag=AC00_1347 NZ_JJLU01000046.1 Protein Homology CDS 11370 12179 . + 0 ID=cds-WP_001257044.1;Parent=gene-AC00_RS17690;Dbxref=GenBank:WP_001257044.1;Name=WP_001257044.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309746.1;locus_tag=AC00_RS17690;product=invasion regulator SirB1;protein_id=WP_001257044.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 12215 13069 . + . ID=gene-AC00_RS17685;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AC00_RS17685;old_locus_tag=AC00_1348 NZ_JJLU01000046.1 Protein Homology CDS 12215 13069 . + 0 ID=cds-WP_000811065.1;Parent=gene-AC00_RS17685;Dbxref=GenBank:WP_000811065.1;Name=WP_000811065.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=AC00_RS17685;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_000811065.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 13217 13324 . - . ID=gene-AC00_RS0124325;Name=AC00_RS0124325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124325 NZ_JJLU01000046.1 Protein Homology CDS 13217 13324 . - 0 ID=cds-WP_000170955.1;Parent=gene-AC00_RS0124325;Dbxref=GenBank:WP_000170955.1;Name=WP_000170955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025297.1;locus_tag=AC00_RS0124325;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170955.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 13753 13860 . - . ID=gene-AC00_RS17680;Name=AC00_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17680;old_locus_tag=AC00_1350 NZ_JJLU01000046.1 Protein Homology CDS 13753 13860 . - 0 ID=cds-WP_000170963.1;Parent=gene-AC00_RS17680;Dbxref=GenBank:WP_000170963.1;Name=WP_000170963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025298.1;locus_tag=AC00_RS17680;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_000170963.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 14265 15365 . - . ID=gene-AC00_RS17675;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=AC00_RS17675;old_locus_tag=AC00_1351 NZ_JJLU01000046.1 Protein Homology CDS 14265 15365 . - 0 ID=cds-WP_032288187.1;Parent=gene-AC00_RS17675;Dbxref=GenBank:WP_032288187.1;Name=WP_032288187.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309748.1;locus_tag=AC00_RS17675;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_032288187.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 15635 15865 . + . ID=gene-AC00_RS17670;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=AC00_RS17670;old_locus_tag=AC00_1352 NZ_JJLU01000046.1 Protein Homology CDS 15635 15865 . + 0 ID=cds-WP_001146444.1;Parent=gene-AC00_RS17670;Dbxref=GenBank:WP_001146444.1;Name=WP_001146444.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309749.1;locus_tag=AC00_RS17670;product=putative cation transport regulator ChaB;protein_id=WP_001146444.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 16023 16718 . + . ID=gene-AC00_RS17665;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=AC00_RS17665;old_locus_tag=AC00_1353 NZ_JJLU01000046.1 Protein Homology CDS 16023 16718 . + 0 ID=cds-WP_001718152.1;Parent=gene-AC00_RS17665;Dbxref=GenBank:WP_001718152.1;Name=WP_001718152.1;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=AC00_RS17665;product=glutathione-specific gamma-glutamylcyclotransferase;protein_id=WP_001718152.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 16762 17115 . - . ID=gene-AC00_RS17660;Name=ychN;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=AC00_RS17660;old_locus_tag=AC00_1354 NZ_JJLU01000046.1 Protein Homology CDS 16762 17115 . - 0 ID=cds-WP_001169669.1;Parent=gene-AC00_RS17660;Dbxref=GenBank:WP_001169669.1;Name=WP_001169669.1;gbkey=CDS;gene=ychN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=AC00_RS17660;product=DsrE/F sulfur relay family protein YchN;protein_id=WP_001169669.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 17301 18695 . + . ID=gene-AC00_RS17655;Name=ychO;gbkey=Gene;gene=ychO;gene_biotype=protein_coding;gene_synonym=iatA;locus_tag=AC00_RS17655;old_locus_tag=AC00_1355 NZ_JJLU01000046.1 Protein Homology CDS 17301 18695 . + 0 ID=cds-WP_032280781.1;Parent=gene-AC00_RS17655;Dbxref=GenBank:WP_032280781.1;Name=WP_032280781.1;gbkey=CDS;gene=ychO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415738.2;locus_tag=AC00_RS17655;product=inverse autotransporter invasin YchO;protein_id=WP_032280781.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 18696 19346 . - . ID=gene-AC00_RS17650;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=AC00_RS17650;old_locus_tag=AC00_1356 NZ_JJLU01000046.1 Protein Homology CDS 18696 19346 . - 0 ID=cds-WP_000070491.1;Parent=gene-AC00_RS17650;Dbxref=GenBank:WP_000070491.1;Name=WP_000070491.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=AC00_RS17650;product=two-component system response regulator NarL;protein_id=WP_000070491.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 19339 21135 . - . ID=gene-AC00_RS17645;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=AC00_RS17645;old_locus_tag=AC00_1357 NZ_JJLU01000046.1 Protein Homology CDS 19339 21135 . - 0 ID=cds-WP_000918073.1;Parent=gene-AC00_RS17645;Dbxref=GenBank:WP_000918073.1;Name=WP_000918073.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309754.1;locus_tag=AC00_RS17645;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_000918073.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 21474 22865 . + . ID=gene-AC00_RS17640;Name=narK;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=AC00_RS17640;old_locus_tag=AC00_1358 NZ_JJLU01000046.1 Protein Homology CDS 21474 22865 . + 0 ID=cds-WP_000019827.1;Parent=gene-AC00_RS17640;Dbxref=GenBank:WP_000019827.1;Name=WP_000019827.1;gbkey=CDS;gene=narK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415741.1;locus_tag=AC00_RS17640;product=nitrate transporter NarK;protein_id=WP_000019827.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 23258 27001 . + . ID=gene-AC00_RS17635;Name=narG;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=AC00_RS17635;old_locus_tag=AC00_1359 NZ_JJLU01000046.1 Protein Homology CDS 23258 27001 . + 0 ID=cds-WP_000032935.1;Parent=gene-AC00_RS17635;Dbxref=GenBank:WP_000032935.1;Name=WP_000032935.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narG;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309756.1;locus_tag=AC00_RS17635;product=nitrate reductase subunit alpha;protein_id=WP_000032935.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 26998 28536 . + . ID=gene-AC00_RS17630;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AC00_RS17630;old_locus_tag=AC00_1360 NZ_JJLU01000046.1 Protein Homology CDS 26998 28536 . + 0 ID=cds-WP_000702660.1;Parent=gene-AC00_RS17630;Dbxref=GenBank:WP_000702660.1;Name=WP_000702660.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309757.1;locus_tag=AC00_RS17630;product=nitrate reductase subunit beta;protein_id=WP_000702660.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 28533 29243 . + . ID=gene-AC00_RS17625;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=AC00_RS17625;old_locus_tag=AC00_1361 NZ_JJLU01000046.1 Protein Homology CDS 28533 29243 . + 0 ID=cds-WP_000571687.1;Parent=gene-AC00_RS17625;Dbxref=GenBank:WP_000571687.1;Name=WP_000571687.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309758.1;locus_tag=AC00_RS17625;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_000571687.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 29243 29920 . + . ID=gene-AC00_RS17620;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AC00_RS17620;old_locus_tag=AC00_1362 NZ_JJLU01000046.1 Protein Homology CDS 29243 29920 . + 0 ID=cds-WP_001160110.1;Parent=gene-AC00_RS17620;Dbxref=GenBank:WP_001160110.1;Name=WP_001160110.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309759.1;locus_tag=AC00_RS17620;product=respiratory nitrate reductase subunit gamma;protein_id=WP_001160110.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 30104 30235 . - . ID=gene-AC00_RS26610;Name=AC00_RS26610;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC00_RS26610 NZ_JJLU01000046.1 cmsearch ncRNA 30104 30235 . - . ID=rna-AC00_RS26610;Parent=gene-AC00_RS26610;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26610;product=RtT sRNA NZ_JJLU01000046.1 cmsearch exon 30104 30235 . - . ID=exon-AC00_RS26610-1;Parent=rna-AC00_RS26610;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26610;product=RtT sRNA NZ_JJLU01000046.1 RefSeq gene 30282 30366 . - . ID=gene-AC00_RS17615;Name=AC00_RS17615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS17615;old_locus_tag=AC00_1363 NZ_JJLU01000046.1 tRNAscan-SE tRNA 30282 30366 . - . ID=rna-AC00_RS17615;Parent=gene-AC00_RS17615;anticodon=(pos:complement(30330..30332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17615;product=tRNA-Tyr NZ_JJLU01000046.1 tRNAscan-SE exon 30282 30366 . - . ID=exon-AC00_RS17615-1;Parent=rna-AC00_RS17615;anticodon=(pos:complement(30330..30332));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17615;product=tRNA-Tyr NZ_JJLU01000046.1 RefSeq gene 30401 30485 . - . ID=gene-AC00_RS17610;Name=AC00_RS17610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS17610;old_locus_tag=AC00_1364 NZ_JJLU01000046.1 tRNAscan-SE tRNA 30401 30485 . - . ID=rna-AC00_RS17610;Parent=gene-AC00_RS17610;anticodon=(pos:complement(30449..30451));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17610;product=tRNA-Tyr NZ_JJLU01000046.1 tRNAscan-SE exon 30401 30485 . - . ID=exon-AC00_RS17610-1;Parent=rna-AC00_RS17610;anticodon=(pos:complement(30449..30451));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17610;product=tRNA-Tyr NZ_JJLU01000046.1 RefSeq gene 30520 30604 . - . ID=gene-AC00_RS17605;Name=AC00_RS17605;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS17605;old_locus_tag=AC00_1365 NZ_JJLU01000046.1 tRNAscan-SE tRNA 30520 30604 . - . ID=rna-AC00_RS17605;Parent=gene-AC00_RS17605;anticodon=(pos:complement(30568..30570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17605;product=tRNA-Tyr NZ_JJLU01000046.1 tRNAscan-SE exon 30520 30604 . - . ID=exon-AC00_RS17605-1;Parent=rna-AC00_RS17605;anticodon=(pos:complement(30568..30570));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17605;product=tRNA-Tyr NZ_JJLU01000046.1 RefSeq gene 30639 30723 . - . ID=gene-AC00_RS17600;Name=AC00_RS17600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS17600;old_locus_tag=AC00_1366 NZ_JJLU01000046.1 tRNAscan-SE tRNA 30639 30723 . - . ID=rna-AC00_RS17600;Parent=gene-AC00_RS17600;anticodon=(pos:complement(30687..30689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17600;product=tRNA-Tyr NZ_JJLU01000046.1 tRNAscan-SE exon 30639 30723 . - . ID=exon-AC00_RS17600-1;Parent=rna-AC00_RS17600;anticodon=(pos:complement(30687..30689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS17600;product=tRNA-Tyr NZ_JJLU01000046.1 RefSeq gene 30883 31725 . - . ID=gene-AC00_RS17595;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=AC00_RS17595;old_locus_tag=AC00_1367 NZ_JJLU01000046.1 Protein Homology CDS 30883 31725 . - 0 ID=cds-WP_000555849.1;Parent=gene-AC00_RS17595;Dbxref=GenBank:WP_000555849.1;Name=WP_000555849.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707138.1;locus_tag=AC00_RS17595;product=formyltetrahydrofolate deformylase;protein_id=WP_000555849.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 31775 32233 . - . ID=gene-AC00_RS0124335;Name=ychJ;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=AC00_RS0124335;old_locus_tag=AC00_1368 NZ_JJLU01000046.1 Protein Homology CDS 31775 32233 . - 0 ID=cds-WP_021540927.1;Parent=gene-AC00_RS0124335;Dbxref=GenBank:WP_021540927.1;Name=WP_021540927.1;gbkey=CDS;gene=ychJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309762.1;locus_tag=AC00_RS0124335;product=YchJ family protein;protein_id=WP_021540927.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 32346 33251 . + . ID=gene-AC00_RS17590;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=AC00_RS17590;old_locus_tag=AC00_1369 NZ_JJLU01000046.1 Protein Homology CDS 32346 33251 . + 0 ID=cds-WP_001226476.1;Parent=gene-AC00_RS17590;Dbxref=GenBank:WP_001226476.1;Name=WP_001226476.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707140.2;locus_tag=AC00_RS17590;product=patatin-like phospholipase RssA;protein_id=WP_001226476.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 33343 34356 . + . ID=gene-AC00_RS17585;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=AC00_RS17585;old_locus_tag=AC00_1370 NZ_JJLU01000046.1 Protein Homology CDS 33343 34356 . + 0 ID=cds-WP_000193447.1;Parent=gene-AC00_RS17585;Dbxref=GenBank:WP_000193447.1;Name=WP_000193447.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309764.1;locus_tag=AC00_RS17585;product=two-component system response regulator RssB;protein_id=WP_000193447.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 34558 35466 . + . ID=gene-AC00_RS17580;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AC00_RS17580;old_locus_tag=AC00_1371 NZ_JJLU01000046.1 Protein Homology CDS 34558 35466 . + 0 ID=cds-WP_000718995.1;Parent=gene-AC00_RS17580;Dbxref=GenBank:WP_000718995.1;Name=WP_000718995.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309765.1;locus_tag=AC00_RS17580;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_000718995.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 35610 36023 . - . ID=gene-AC00_RS17575;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=AC00_RS17575;old_locus_tag=AC00_1372 NZ_JJLU01000046.1 Protein Homology CDS 35610 36023 . - 0 ID=cds-WP_001287378.1;Parent=gene-AC00_RS17575;Dbxref=GenBank:WP_001287378.1;Name=WP_001287378.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309766.1;locus_tag=AC00_RS17575;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_001287378.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 36627 37244 . + . ID=gene-AC00_RS17570;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=AC00_RS17570;old_locus_tag=AC00_1374 NZ_JJLU01000046.1 Protein Homology CDS 36627 37244 . + 0 ID=cds-WP_032280776.1;Parent=gene-AC00_RS17570;Dbxref=GenBank:WP_032280776.1;Name=WP_032280776.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309767.1;locus_tag=AC00_RS17570;product=thymidine kinase;protein_id=WP_032280776.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 37545 40220 . - . ID=gene-AC00_RS17565;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=AC00_RS17565;old_locus_tag=AC00_1375 NZ_JJLU01000046.1 Protein Homology CDS 37545 40220 . - 0 ID=cds-WP_000301651.1;Parent=gene-AC00_RS17565;Dbxref=GenBank:WP_000301651.1;Name=WP_000301651.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309768.1;locus_tag=AC00_RS17565;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_000301651.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 40613 40666 . + . ID=gene-AC00_RS31165;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AC00_RS31165 NZ_JJLU01000046.1 Protein Homology CDS 40613 40666 . + 0 ID=cds-WP_211180492.1;Parent=gene-AC00_RS31165;Dbxref=GenBank:WP_211180492.1;Name=WP_211180492.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051181.1;locus_tag=AC00_RS31165;product=protein YchT;protein_id=WP_211180492.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 40697 41344 . + . ID=gene-AC00_RS17560;Name=ychE;gbkey=Gene;gene=ychE;gene_biotype=protein_coding;locus_tag=AC00_RS17560;old_locus_tag=AC00_1376 NZ_JJLU01000046.1 Protein Homology CDS 40697 41344 . + 0 ID=cds-WP_000616773.1;Parent=gene-AC00_RS17560;Dbxref=GenBank:WP_000616773.1;Name=WP_000616773.1;gbkey=CDS;gene=ychE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309769.1;locus_tag=AC00_RS17560;product=NAAT family transporter YchE;protein_id=WP_000616773.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 41502 41663 . - . ID=gene-AC00_RS30875;Name=AC00_RS30875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30875;old_locus_tag=AC00_1377 NZ_JJLU01000046.1 GeneMarkS-2+ CDS 41502 41663 . - 0 ID=cds-WP_000021850.1;Parent=gene-AC00_RS30875;Dbxref=GenBank:WP_000021850.1;Name=WP_000021850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS30875;product=hypothetical protein;protein_id=WP_000021850.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 42082 43713 . + . ID=gene-AC00_RS17555;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=AC00_RS17555;old_locus_tag=AC00_1378 NZ_JJLU01000046.1 Protein Homology CDS 42082 43713 . + 0 ID=cds-WP_032280782.1;Parent=gene-AC00_RS17555;Dbxref=GenBank:WP_032280782.1;Name=WP_032280782.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707150.2;locus_tag=AC00_RS17555;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_032280782.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 43799 44719 . + . ID=gene-AC00_RS17550;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AC00_RS17550;old_locus_tag=AC00_1379 NZ_JJLU01000046.1 Protein Homology CDS 43799 44719 . + 0 ID=cds-WP_000911112.1;Parent=gene-AC00_RS17550;Dbxref=GenBank:WP_000911112.1;Name=WP_000911112.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=AC00_RS17550;product=oligopeptide ABC transporter permease OppB;protein_id=WP_000911112.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 44734 45642 . + . ID=gene-AC00_RS17545;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=AC00_RS17545;old_locus_tag=AC00_1380 NZ_JJLU01000046.1 Protein Homology CDS 44734 45642 . + 0 ID=cds-WP_000979661.1;Parent=gene-AC00_RS17545;Dbxref=GenBank:WP_000979661.1;Name=WP_000979661.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=AC00_RS17545;product=oligopeptide ABC transporter permease OppC;protein_id=WP_000979661.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 45654 46667 . + . ID=gene-AC00_RS17540;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AC00_RS17540;old_locus_tag=AC00_1381 NZ_JJLU01000046.1 Protein Homology CDS 45654 46667 . + 0 ID=cds-WP_032280777.1;Parent=gene-AC00_RS17540;Dbxref=GenBank:WP_032280777.1;Name=WP_032280777.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=AC00_RS17540;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD;protein_id=WP_032280777.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 46664 47668 . + . ID=gene-AC00_RS17535;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=AC00_RS17535;old_locus_tag=AC00_1382 NZ_JJLU01000046.1 Protein Homology CDS 46664 47668 . + 0 ID=cds-WP_000994905.1;Parent=gene-AC00_RS17535;Dbxref=GenBank:WP_000994905.1;Name=WP_000994905.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309774.1;locus_tag=AC00_RS17535;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_000994905.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 47721 48050 . - . ID=gene-AC00_RS17530;Name=yciU;gbkey=Gene;gene=yciU;gene_biotype=protein_coding;locus_tag=AC00_RS17530;old_locus_tag=AC00_1383 NZ_JJLU01000046.1 Protein Homology CDS 47721 48050 . - 0 ID=cds-WP_000366959.1;Parent=gene-AC00_RS17530;Dbxref=GenBank:WP_000366959.1;Name=WP_000366959.1;gbkey=CDS;gene=yciU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309775.2;locus_tag=AC00_RS17530;product=HI1450 family dsDNA-mimic protein;protein_id=WP_000366959.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 48085 49545 . - . ID=gene-AC00_RS17525;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AC00_RS17525;old_locus_tag=AC00_1384 NZ_JJLU01000046.1 Protein Homology CDS 48085 49545 . - 0 ID=cds-WP_000214516.1;Parent=gene-AC00_RS17525;Dbxref=GenBank:WP_000214516.1;Name=WP_000214516.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=AC00_RS17525;product=cardiolipin synthase;protein_id=WP_000214516.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 49688 49861 . + . ID=gene-AC00_RS30245;Name=yciY;gbkey=Gene;gene=yciY;gene_biotype=protein_coding;locus_tag=AC00_RS30245 NZ_JJLU01000046.1 Protein Homology CDS 49688 49861 . + 0 ID=cds-WP_001309467.1;Parent=gene-AC00_RS30245;Dbxref=GenBank:WP_001309467.1;Name=WP_001309467.1;gbkey=CDS;gene=yciY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=AC00_RS30245;product=YciY family protein;protein_id=WP_001309467.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 49916 51169 . - . ID=gene-AC00_RS17520;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=AC00_RS17520;old_locus_tag=AC00_1385 NZ_JJLU01000046.1 Protein Homology CDS 49916 51169 . - 0 ID=cds-WP_000020078.1;Parent=gene-AC00_RS17520;Dbxref=GenBank:WP_000020078.1;Name=WP_000020078.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309777.1;locus_tag=AC00_RS17520;product=voltage-gated potassium channel protein;protein_id=WP_000020078.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 51469 51765 . - . ID=gene-AC00_RS17515;Name=yciI;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=AC00_RS17515;old_locus_tag=AC00_1386 NZ_JJLU01000046.1 Protein Homology CDS 51469 51765 . - 0 ID=cds-WP_000967595.1;Parent=gene-AC00_RS17515;Dbxref=GenBank:WP_000967595.1;Name=WP_000967595.1;gbkey=CDS;gene=yciI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=AC00_RS17515;product=YciI family protein;protein_id=WP_000967595.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 51989 52708 . + . ID=gene-AC00_RS17510;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=AC00_RS17510;old_locus_tag=AC00_1387 NZ_JJLU01000046.1 Protein Homology CDS 51989 52708 . + 0 ID=cds-WP_001307740.1;Parent=gene-AC00_RS17510;Dbxref=GenBank:WP_001307740.1;Name=WP_001307740.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309779.1;locus_tag=AC00_RS17510;product=TonB system transport protein TonB;protein_id=WP_001307740.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 52748 53146 . - . ID=gene-AC00_RS17505;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=AC00_RS17505;old_locus_tag=AC00_1388 NZ_JJLU01000046.1 Protein Homology CDS 52748 53146 . - 0 ID=cds-WP_000108160.1;Parent=gene-AC00_RS17505;Dbxref=GenBank:WP_000108160.1;Name=WP_000108160.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415769.1;locus_tag=AC00_RS17505;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_000108160.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 53251 53790 . - . ID=gene-AC00_RS17500;Name=yciB;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=AC00_RS17500;old_locus_tag=AC00_1389 NZ_JJLU01000046.1 Protein Homology CDS 53251 53790 . - 0 ID=cds-WP_032280779.1;Parent=gene-AC00_RS17500;Dbxref=GenBank:WP_032280779.1;Name=WP_032280779.1;gbkey=CDS;gene=yciB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309781.1;locus_tag=AC00_RS17500;product=septation protein A;protein_id=WP_032280779.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 53820 54563 . - . ID=gene-AC00_RS17495;Name=yciC;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=AC00_RS17495;old_locus_tag=AC00_1390 NZ_JJLU01000046.1 Protein Homology CDS 53820 54563 . - 0 ID=cds-WP_000028541.1;Parent=gene-AC00_RS17495;Dbxref=GenBank:WP_000028541.1;Name=WP_000028541.1;gbkey=CDS;gene=yciC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415771.1;locus_tag=AC00_RS17495;product=YciC family protein;protein_id=WP_000028541.1;transl_table=11 NZ_JJLU01000046.1 RefSeq pseudogene 54591 54680 . - . ID=gene-AC00_RS27400;Name=AC00_RS27400;end_range=54680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27400;partial=true;pseudo=true NZ_JJLU01000046.1 Protein Homology CDS 54591 54680 . - 0 ID=cds-AC00_RS27400;Parent=gene-AC00_RS27400;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=54680,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460692.1;locus_tag=AC00_RS27400;partial=true;product=YkgJ family cysteine cluster protein;pseudo=true;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 54920 55558 . + . ID=gene-AC00_RS17490;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=AC00_RS17490;old_locus_tag=AC00_1391 NZ_JJLU01000046.1 Protein Homology CDS 54920 55558 . + 0 ID=cds-WP_000737224.1;Parent=gene-AC00_RS17490;Dbxref=GenBank:WP_000737224.1;Name=WP_000737224.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=AC00_RS17490;product=outer membrane protein OmpW;protein_id=WP_000737224.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 55604 56734 . - . ID=gene-AC00_RS17485;Name=AC00_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17485;old_locus_tag=AC00_1392 NZ_JJLU01000046.1 Protein Homology CDS 55604 56734 . - 0 ID=cds-WP_000113674.1;Parent=gene-AC00_RS17485;Dbxref=GenBank:WP_000113674.1;Name=WP_000113674.1;Ontology_term=GO:0015074,GO:0003677,GO:0008907;gbkey=CDS;go_function=DNA binding|0003677||IEA,integrase activity|0008907||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309784.1;locus_tag=AC00_RS17485;product=phage integrase Arm DNA-binding domain-containing protein;protein_id=WP_000113674.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 56712 56960 . - . ID=gene-AC00_RS0124345;Name=AC00_RS0124345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124345 NZ_JJLU01000046.1 Protein Homology CDS 56712 56960 . - 0 ID=cds-WP_000113189.1;Parent=gene-AC00_RS0124345;Dbxref=GenBank:WP_000113189.1;Name=WP_000113189.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309785.1;locus_tag=AC00_RS0124345;product=excisionase;protein_id=WP_000113189.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 57025 59499 . - . ID=gene-AC00_RS17480;Name=AC00_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17480;old_locus_tag=AC00_1393 NZ_JJLU01000046.1 Protein Homology CDS 57025 59499 . - 0 ID=cds-WP_032280780.1;Parent=gene-AC00_RS17480;Dbxref=GenBank:WP_032280780.1;Name=WP_032280780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309786.1;locus_tag=AC00_RS17480;product=exonuclease;protein_id=WP_032280780.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 59595 59783 . - . ID=gene-AC00_RS17475;Name=AC00_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17475;old_locus_tag=AC00_1394 NZ_JJLU01000046.1 Protein Homology CDS 59595 59783 . - 0 ID=cds-WP_000199473.1;Parent=gene-AC00_RS17475;Dbxref=GenBank:WP_000199473.1;Name=WP_000199473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310242.1;locus_tag=AC00_RS17475;product=DUF1482 family protein;protein_id=WP_000199473.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 59780 59968 . - . ID=gene-AC00_RS17470;Name=dicB;gbkey=Gene;gene=dicB;gene_biotype=protein_coding;locus_tag=AC00_RS17470;old_locus_tag=AC00_1395 NZ_JJLU01000046.1 Protein Homology CDS 59780 59968 . - 0 ID=cds-WP_000449175.1;Parent=gene-AC00_RS17470;Dbxref=GenBank:WP_000449175.1;Name=WP_000449175.1;gbkey=CDS;gene=dicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310241.1;locus_tag=AC00_RS17470;product=cell division inhibition protein DicB;protein_id=WP_000449175.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 60540 60818 . + . ID=gene-AC00_RS17465;Name=AC00_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17465;old_locus_tag=AC00_1397 NZ_JJLU01000046.1 Protein Homology CDS 60540 60818 . + 0 ID=cds-WP_000358769.1;Parent=gene-AC00_RS17465;Dbxref=GenBank:WP_000358769.1;Name=WP_000358769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000358768.1;locus_tag=AC00_RS17465;product=hypothetical protein;protein_id=WP_000358769.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 60778 61179 . - . ID=gene-AC00_RS17460;Name=AC00_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17460;old_locus_tag=AC00_1398 NZ_JJLU01000046.1 Protein Homology CDS 60778 61179 . - 0 ID=cds-WP_001339605.1;Parent=gene-AC00_RS17460;Dbxref=GenBank:WP_001339605.1;Name=WP_001339605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394555.1;locus_tag=AC00_RS17460;product=hypothetical protein;protein_id=WP_001339605.1;transl_table=11 NZ_JJLU01000046.1 RefSeq gene 61191 61343 . - . ID=gene-AC00_RS0124355;Name=AC00_RS0124355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124355;old_locus_tag=AC00_1399 NZ_JJLU01000046.1 Protein Homology CDS 61191 61343 . - 0 ID=cds-WP_001725971.1;Parent=gene-AC00_RS0124355;Dbxref=GenBank:WP_001725971.1;Name=WP_001725971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000379546.1;locus_tag=AC00_RS0124355;product=DUF1391 family protein;protein_id=WP_001725971.1;transl_table=11 NZ_JJLU01000046.1 RefSeq pseudogene 61626 61930 . - . ID=gene-AC00_RS17455;Name=AC00_RS17455;end_range=61930,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17455;old_locus_tag=AC00_1400;partial=true;pseudo=true NZ_JJLU01000046.1 Protein Homology CDS 61626 61930 . - 2 ID=cds-AC00_RS17455;Parent=gene-AC00_RS17455;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=61930,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS17455;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000047.1 1 19741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000047.1 RefSeq region 1 19741 . + . ID=NZ_JJLU01000047.1:1..19741;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000047.1 RefSeq gene 1 662 . + . ID=gene-AC00_RS0124370;Name=AC00_RS0124370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124370;old_locus_tag=AC00_1401;partial=true;start_range=.,1 NZ_JJLU01000047.1 Protein Homology CDS 1 214 . + 0 ID=cds-WP_231248335.1-3;Parent=gene-AC00_RS0124370;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124370;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;start_range=.,1;transl_table=11 NZ_JJLU01000047.1 Protein Homology CDS 214 662 . + 2 ID=cds-WP_231248335.1-3;Parent=gene-AC00_RS0124370;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124370;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 811 1617 . - . ID=gene-AC00_RS17450;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=AC00_RS17450;old_locus_tag=AC00_1402 NZ_JJLU01000047.1 Protein Homology CDS 811 1617 . - 0 ID=cds-WP_032280783.1;Parent=gene-AC00_RS17450;Dbxref=GenBank:WP_032280783.1;Name=WP_032280783.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415776.1;locus_tag=AC00_RS17450;product=tryptophan synthase subunit alpha;protein_id=WP_032280783.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 1617 2810 . - . ID=gene-AC00_RS17445;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=AC00_RS17445;old_locus_tag=AC00_1403 NZ_JJLU01000047.1 Protein Homology CDS 1617 2810 . - 0 ID=cds-WP_032280784.1;Parent=gene-AC00_RS17445;Dbxref=GenBank:WP_032280784.1;Name=WP_032280784.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309860.1;locus_tag=AC00_RS17445;product=tryptophan synthase subunit beta;protein_id=WP_032280784.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 2822 4183 . - . ID=gene-AC00_RS17440;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AC00_RS17440;old_locus_tag=AC00_1404 NZ_JJLU01000047.1 Protein Homology CDS 2822 4183 . - 0 ID=cds-WP_077757371.1;Parent=gene-AC00_RS17440;Dbxref=GenBank:WP_077757371.1;Name=WP_077757371.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707171.1;locus_tag=AC00_RS17440;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_077757371.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 4184 5779 . - . ID=gene-AC00_RS17435;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=AC00_RS17435;old_locus_tag=AC00_1405 NZ_JJLU01000047.1 Protein Homology CDS 4184 5779 . - 0 ID=cds-WP_000763524.1;Parent=gene-AC00_RS17435;Dbxref=GenBank:WP_000763524.1;Name=WP_000763524.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=AC00_RS17435;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_000763524.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 5779 7341 . - . ID=gene-AC00_RS17430;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=AC00_RS17430;old_locus_tag=AC00_1406 NZ_JJLU01000047.1 Protein Homology CDS 5779 7341 . - 0 ID=cds-WP_032280785.1;Parent=gene-AC00_RS17430;Dbxref=GenBank:WP_032280785.1;Name=WP_032280785.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309863.1;locus_tag=AC00_RS17430;product=anthranilate synthase component I;protein_id=WP_032280785.1;transl_table=11 NZ_JJLU01000047.1 cmsearch sequence_feature 7363 7456 . - . ID=id-NZ_JJLU01000047.1:7363..7456;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLU01000047.1 RefSeq gene 7433 7477 . - . ID=gene-AC00_RS27415;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=AC00_RS27415 NZ_JJLU01000047.1 Protein Homology CDS 7433 7477 . - 0 ID=cds-WP_001700591.1;Parent=gene-AC00_RS27415;Dbxref=GenBank:WP_001700591.1;Name=WP_001700591.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309864.1;locus_tag=AC00_RS27415;product=trp operon leader peptide;protein_id=WP_001700591.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 7615 8496 . + . ID=gene-AC00_RS17425;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=AC00_RS17425;old_locus_tag=AC00_1407 NZ_JJLU01000047.1 Protein Homology CDS 7615 8496 . + 0 ID=cds-WP_032280786.1;Parent=gene-AC00_RS17425;Dbxref=GenBank:WP_032280786.1;Name=WP_032280786.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309865.1;locus_tag=AC00_RS17425;product=RNase RNM;protein_id=WP_032280786.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 8493 9113 . + . ID=gene-AC00_RS17420;Name=yciO;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=AC00_RS17420;old_locus_tag=AC00_1408 NZ_JJLU01000047.1 Protein Homology CDS 8493 9113 . + 0 ID=cds-WP_032280787.1;Parent=gene-AC00_RS17420;Dbxref=GenBank:WP_032280787.1;Name=WP_032280787.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;gene=yciO;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=AC00_RS17420;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_032280787.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 9141 11036 . + . ID=gene-AC00_RS17415;Name=yciQ;gbkey=Gene;gene=yciQ;gene_biotype=protein_coding;locus_tag=AC00_RS17415;old_locus_tag=AC00_1409 NZ_JJLU01000047.1 Protein Homology CDS 9141 11036 . + 0 ID=cds-WP_032280788.1;Parent=gene-AC00_RS17415;Dbxref=GenBank:WP_032280788.1;Name=WP_032280788.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yciQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415784.1;locus_tag=AC00_RS17415;product=DUF2207 domain-containing protein;protein_id=WP_032280788.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 11250 12122 . + . ID=gene-AC00_RS17410;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AC00_RS17410;old_locus_tag=AC00_1410 NZ_JJLU01000047.1 Protein Homology CDS 11250 12122 . + 0 ID=cds-WP_001291218.1;Parent=gene-AC00_RS17410;Dbxref=GenBank:WP_001291218.1;Name=WP_001291218.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309868.1;locus_tag=AC00_RS17410;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_001291218.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 12162 12752 . - . ID=gene-AC00_RS17405;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=AC00_RS17405;old_locus_tag=AC00_1411 NZ_JJLU01000047.1 Protein Homology CDS 12162 12752 . - 0 ID=cds-WP_001278904.1;Parent=gene-AC00_RS17405;Dbxref=GenBank:WP_001278904.1;Name=WP_001278904.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=AC00_RS17405;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_001278904.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 12749 13507 . - . ID=gene-AC00_RS17400;Name=yciK;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=AC00_RS17400;old_locus_tag=AC00_1412 NZ_JJLU01000047.1 Protein Homology CDS 12749 13507 . - 0 ID=cds-WP_000559268.1;Parent=gene-AC00_RS17400;Dbxref=GenBank:WP_000559268.1;Name=WP_000559268.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yciK;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309870.1;locus_tag=AC00_RS17400;product=YciK family oxidoreductase;protein_id=WP_000559268.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 13727 14776 . + . ID=gene-AC00_RS17395;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AC00_RS17395;old_locus_tag=AC00_1413 NZ_JJLU01000047.1 Protein Homology CDS 13727 14776 . + 0 ID=cds-WP_000422055.1;Parent=gene-AC00_RS17395;Dbxref=GenBank:WP_000422055.1;Name=WP_000422055.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309871.1;locus_tag=AC00_RS17395;product=protease SohB;protein_id=WP_000422055.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 14812 15063 . - . ID=gene-AC00_RS17390;Name=yciN;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=AC00_RS17390;old_locus_tag=AC00_1414 NZ_JJLU01000047.1 Protein Homology CDS 14812 15063 . - 0 ID=cds-WP_001031530.1;Parent=gene-AC00_RS17390;Dbxref=GenBank:WP_001031530.1;Name=WP_001031530.1;gbkey=CDS;gene=yciN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309872.1;locus_tag=AC00_RS17390;product=YciN family protein;protein_id=WP_001031530.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 15443 18040 . + . ID=gene-AC00_RS17385;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AC00_RS17385;old_locus_tag=AC00_1415 NZ_JJLU01000047.1 Protein Homology CDS 15443 18040 . + 0 ID=cds-WP_001295576.1;Parent=gene-AC00_RS17385;Dbxref=GenBank:WP_001295576.1;Name=WP_001295576.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=AC00_RS17385;product=type I DNA topoisomerase;protein_id=WP_001295576.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 18250 19224 . + . ID=gene-AC00_RS17380;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AC00_RS17380;old_locus_tag=AC00_1416 NZ_JJLU01000047.1 Protein Homology CDS 18250 19224 . + 0 ID=cds-WP_000776253.1;Parent=gene-AC00_RS17380;Dbxref=GenBank:WP_000776253.1;Name=WP_000776253.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=AC00_RS17380;product=HTH-type transcriptional regulator CysB;protein_id=WP_000776253.1;transl_table=11 NZ_JJLU01000047.1 RefSeq gene 19479 19741 . + . ID=gene-AC00_RS27425;Name=AC00_RS27425;end_range=19741,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27425;old_locus_tag=AC00_1417;partial=true NZ_JJLU01000047.1 Protein Homology CDS 19479 19741 . + 0 ID=cds-WP_001508402.1;Parent=gene-AC00_RS27425;Dbxref=GenBank:WP_001508402.1;Name=WP_001508402.1;end_range=19741,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27425;partial=true;product=IS1-like element transposase;protein_id=WP_001508402.1;transl_table=11 ##sequence-region NZ_JJLU01000048.1 1 59594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000048.1 RefSeq region 1 59594 . + . ID=NZ_JJLU01000048.1:1..59594;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000048.1 RefSeq gene 1 274 . + . ID=gene-AC00_RS17375;Name=AC00_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17375;old_locus_tag=AC00_1418;partial=true;start_range=.,1 NZ_JJLU01000048.1 Protein Homology CDS 1 274 . + 1 ID=cds-WP_000308288.1-2;Parent=gene-AC00_RS17375;Dbxref=GenBank:WP_000308288.1;Name=WP_000308288.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS17375;partial=true;product=IS1 family transposase;protein_id=WP_000308288.1;start_range=.,1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 417 557 . + . ID=gene-AC00_RS17370;Name=ymiA;gbkey=Gene;gene=ymiA;gene_biotype=protein_coding;locus_tag=AC00_RS17370;old_locus_tag=AC00_1419 NZ_JJLU01000048.1 Protein Homology CDS 417 557 . + 0 ID=cds-WP_001300896.1;Parent=gene-AC00_RS17370;Dbxref=GenBank:WP_001300896.1;Name=WP_001300896.1;gbkey=CDS;gene=ymiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=AC00_RS17370;product=YmiA family putative membrane protein;protein_id=WP_001300896.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 560 727 . + . ID=gene-AC00_RS17365;Name=yciX;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=AC00_RS17365;old_locus_tag=AC00_1420 NZ_JJLU01000048.1 Protein Homology CDS 560 727 . + 0 ID=cds-WP_001295578.1;Parent=gene-AC00_RS17365;Dbxref=GenBank:WP_001295578.1;Name=WP_001295578.1;gbkey=CDS;gene=yciX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304581.1;locus_tag=AC00_RS17365;product=protein YciX;protein_id=WP_001295578.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 841 936 . + . ID=gene-AC00_RS30250;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=AC00_RS30250 NZ_JJLU01000048.1 Protein Homology CDS 841 936 . + 0 ID=cds-WP_122987433.1;Parent=gene-AC00_RS30250;Dbxref=GenBank:WP_122987433.1;Name=WP_122987433.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518771.1;locus_tag=AC00_RS30250;product=small membrane protein YmiC;protein_id=WP_122987433.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 1100 3775 . + . ID=gene-AC00_RS17360;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=AC00_RS17360;old_locus_tag=AC00_1421 NZ_JJLU01000048.1 Protein Homology CDS 1100 3775 . + 0 ID=cds-WP_032280792.1;Parent=gene-AC00_RS17360;Dbxref=GenBank:WP_032280792.1;Name=WP_032280792.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309876.1;locus_tag=AC00_RS17360;product=aconitate hydratase AcnA;protein_id=WP_032280792.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 3839 4429 . - . ID=gene-AC00_RS17355;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AC00_RS17355;old_locus_tag=AC00_1422 NZ_JJLU01000048.1 Protein Homology CDS 3839 4429 . - 0 ID=cds-WP_032280793.1;Parent=gene-AC00_RS17355;Dbxref=GenBank:WP_032280793.1;Name=WP_032280793.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309877.1;locus_tag=AC00_RS17355;product=GTP cyclohydrolase II;protein_id=WP_032280793.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 4599 5363 . + . ID=gene-AC00_RS17350;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=AC00_RS17350;old_locus_tag=AC00_1423 NZ_JJLU01000048.1 Protein Homology CDS 4599 5363 . + 0 ID=cds-WP_001256538.1;Parent=gene-AC00_RS17350;Dbxref=GenBank:WP_001256538.1;Name=WP_001256538.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309878.1;locus_tag=AC00_RS17350;product=phosphatidylglycerophosphatase B;protein_id=WP_001256538.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 5512 5820 . + . ID=gene-AC00_RS17345;Name=lapA;gbkey=Gene;gene=lapA;gene_biotype=protein_coding;locus_tag=AC00_RS17345;old_locus_tag=AC00_1424 NZ_JJLU01000048.1 Protein Homology CDS 5512 5820 . + 0 ID=cds-WP_032280794.1;Parent=gene-AC00_RS17345;Dbxref=GenBank:WP_032280794.1;Name=WP_032280794.1;gbkey=CDS;gene=lapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309879.1;locus_tag=AC00_RS17345;product=lipopolysaccharide assembly protein LapA;protein_id=WP_032280794.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 5827 6996 . + . ID=gene-AC00_RS17340;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=AC00_RS17340;old_locus_tag=AC00_1425 NZ_JJLU01000048.1 Protein Homology CDS 5827 6996 . + 0 ID=cds-WP_032280795.1;Parent=gene-AC00_RS17340;Dbxref=GenBank:WP_032280795.1;Name=WP_032280795.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309880.1;locus_tag=AC00_RS17340;product=lipopolysaccharide assembly protein LapB;protein_id=WP_032280795.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 7189 7926 . + . ID=gene-AC00_RS17335;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AC00_RS17335;old_locus_tag=AC00_1427 NZ_JJLU01000048.1 Protein Homology CDS 7189 7926 . + 0 ID=cds-WP_032280817.1;Parent=gene-AC00_RS17335;Dbxref=GenBank:WP_032280817.1;Name=WP_032280817.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=AC00_RS17335;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_032280817.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 7926 8252 . + . ID=gene-AC00_RS17330;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=AC00_RS17330;old_locus_tag=AC00_1428 NZ_JJLU01000048.1 Protein Homology CDS 7926 8252 . + 0 ID=cds-WP_032280796.1;Parent=gene-AC00_RS17330;Dbxref=GenBank:WP_032280796.1;Name=WP_032280796.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=AC00_RS17330;product=stress response translation initiation inhibitor YciH;protein_id=WP_032280796.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 8378 8596 . - . ID=gene-AC00_RS17325;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=AC00_RS17325;old_locus_tag=AC00_1429 NZ_JJLU01000048.1 Protein Homology CDS 8378 8596 . - 0 ID=cds-WP_000498253.1;Parent=gene-AC00_RS17325;Dbxref=GenBank:WP_000498253.1;Name=WP_000498253.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309883.1;locus_tag=AC00_RS17325;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_000498253.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 8865 9614 . - . ID=gene-AC00_RS17320;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;locus_tag=AC00_RS17320;old_locus_tag=AC00_1430 NZ_JJLU01000048.1 Protein Homology CDS 8865 9614 . - 0 ID=cds-WP_032280797.1;Parent=gene-AC00_RS17320;Dbxref=GenBank:WP_032280797.1;Name=WP_032280797.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309884.1;locus_tag=AC00_RS17320;product=DNA-binding transcriptional regulator YciT;protein_id=WP_032280797.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 9704 9877 . - . ID=gene-AC00_RS17315;Name=yciZ;gbkey=Gene;gene=yciZ;gene_biotype=protein_coding;locus_tag=AC00_RS17315;old_locus_tag=AC00_1431 NZ_JJLU01000048.1 Protein Homology CDS 9704 9877 . - 0 ID=cds-WP_001288368.1;Parent=gene-AC00_RS17315;Dbxref=GenBank:WP_001288368.1;Name=WP_001288368.1;gbkey=CDS;gene=yciZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165317.1;locus_tag=AC00_RS17315;product=YciZ family protein;protein_id=WP_001288368.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 9915 10043 . + . ID=gene-AC00_RS31170;Name=ymiD;gbkey=Gene;gene=ymiD;gene_biotype=protein_coding;locus_tag=AC00_RS31170 NZ_JJLU01000048.1 Protein Homology CDS 9915 10043 . + 0 ID=cds-WP_023148853.1;Parent=gene-AC00_RS31170;Dbxref=GenBank:WP_023148853.1;Name=WP_023148853.1;gbkey=CDS;gene=ymiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051182.1;locus_tag=AC00_RS31170;product=protein YmiD;protein_id=WP_023148853.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 10025 12010 . - . ID=gene-AC00_RS17310;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=AC00_RS17310;old_locus_tag=AC00_1432 NZ_JJLU01000048.1 Protein Homology CDS 10025 12010 . - 0 ID=cds-WP_032280798.1;Parent=gene-AC00_RS17310;Dbxref=GenBank:WP_032280798.1;Name=WP_032280798.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309885.1;locus_tag=AC00_RS17310;product=cyclic di-GMP phosphodiesterase;protein_id=WP_032280798.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 12064 12168 . + . ID=gene-AC00_RS29440;Name=AC00_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29440 NZ_JJLU01000048.1 Protein Homology CDS 12064 12168 . + 0 ID=cds-WP_000221855.1;Parent=gene-AC00_RS29440;Dbxref=GenBank:WP_000221855.1;Name=WP_000221855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791239.1;locus_tag=AC00_RS29440;product=hypothetical protein;protein_id=WP_000221855.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 12246 14180 . - . ID=gene-AC00_RS17305;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=AC00_RS17305;old_locus_tag=AC00_1433 NZ_JJLU01000048.1 Protein Homology CDS 12246 14180 . - 0 ID=cds-WP_032280799.1;Parent=gene-AC00_RS17305;Dbxref=GenBank:WP_032280799.1;Name=WP_032280799.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;gene=rnb;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309886.1;locus_tag=AC00_RS17305;product=exoribonuclease II;protein_id=WP_032280799.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 14248 15375 . - . ID=gene-AC00_RS17300;Name=yciW;gbkey=Gene;gene=yciW;gene_biotype=protein_coding;locus_tag=AC00_RS17300;old_locus_tag=AC00_1434 NZ_JJLU01000048.1 Protein Homology CDS 14248 15375 . - 0 ID=cds-WP_032280800.1;Parent=gene-AC00_RS17300;Dbxref=GenBank:WP_032280800.1;Name=WP_032280800.1;gbkey=CDS;gene=yciW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415803.2;locus_tag=AC00_RS17300;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_032280800.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 15519 16307 . - . ID=gene-AC00_RS17295;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=AC00_RS17295;old_locus_tag=AC00_1435 NZ_JJLU01000048.1 Protein Homology CDS 15519 16307 . - 0 ID=cds-WP_000506490.1;Parent=gene-AC00_RS17295;Dbxref=GenBank:WP_000506490.1;Name=WP_000506490.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=AC00_RS17295;product=enoyl-ACP reductase FabI;protein_id=WP_000506490.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 16785 17351 . + . ID=gene-AC00_RS17290;Name=AC00_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17290;old_locus_tag=AC00_1437 NZ_JJLU01000048.1 Protein Homology CDS 16785 17351 . + 0 ID=cds-WP_032280801.1;Parent=gene-AC00_RS17290;Dbxref=GenBank:WP_032280801.1;Name=WP_032280801.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309889.1;locus_tag=AC00_RS17290;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032280801.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 17500 18621 . + . ID=gene-AC00_RS17285;Name=AC00_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17285;old_locus_tag=AC00_1438 NZ_JJLU01000048.1 Protein Homology CDS 17500 18621 . + 0 ID=cds-WP_032280802.1;Parent=gene-AC00_RS17285;Dbxref=GenBank:WP_032280802.1;Name=WP_032280802.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309890.1;locus_tag=AC00_RS17285;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_032280802.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 18621 21728 . + . ID=gene-AC00_RS17280;Name=AC00_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17280;old_locus_tag=AC00_1439 NZ_JJLU01000048.1 Protein Homology CDS 18621 21728 . + 0 ID=cds-WP_032280804.1;Parent=gene-AC00_RS17280;Dbxref=GenBank:WP_032280804.1;Name=WP_032280804.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229509.1;locus_tag=AC00_RS17280;product=efflux RND transporter permease subunit;protein_id=WP_032280804.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 21732 23105 . + . ID=gene-AC00_RS17275;Name=AC00_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17275;old_locus_tag=AC00_1440 NZ_JJLU01000048.1 Protein Homology CDS 21732 23105 . + 0 ID=cds-WP_000946219.1;Parent=gene-AC00_RS17275;Dbxref=GenBank:WP_000946219.1;Name=WP_000946219.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309892.1;locus_tag=AC00_RS17275;product=efflux transporter outer membrane subunit;protein_id=WP_000946219.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 23114 24277 . + . ID=gene-AC00_RS17270;Name=AC00_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17270;old_locus_tag=AC00_1441 NZ_JJLU01000048.1 Protein Homology CDS 23114 24277 . + 0 ID=cds-WP_000135022.1;Parent=gene-AC00_RS17270;Dbxref=GenBank:WP_000135022.1;Name=WP_000135022.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309893.1;locus_tag=AC00_RS17270;product=multidrug effflux MFS transporter;protein_id=WP_000135022.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 24327 25133 . - . ID=gene-AC00_RS17265;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=AC00_RS17265;old_locus_tag=AC00_1442 NZ_JJLU01000048.1 Protein Homology CDS 24327 25133 . - 0 ID=cds-WP_032280806.1;Parent=gene-AC00_RS17265;Dbxref=GenBank:WP_032280806.1;Name=WP_032280806.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309894.1;locus_tag=AC00_RS17265;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_032280806.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 25135 26127 . - . ID=gene-AC00_RS17260;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=AC00_RS17260;old_locus_tag=AC00_1443 NZ_JJLU01000048.1 Protein Homology CDS 25135 26127 . - 0 ID=cds-WP_001128858.1;Parent=gene-AC00_RS17260;Dbxref=GenBank:WP_001128858.1;Name=WP_001128858.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309895.1;locus_tag=AC00_RS17260;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_001128858.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 26127 27017 . - . ID=gene-AC00_RS17255;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=AC00_RS17255;old_locus_tag=AC00_1444 NZ_JJLU01000048.1 Protein Homology CDS 26127 27017 . - 0 ID=cds-WP_001146163.1;Parent=gene-AC00_RS17255;Dbxref=GenBank:WP_001146163.1;Name=WP_001146163.1;gbkey=CDS;gene=sapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415808.1;locus_tag=AC00_RS17255;product=peptide ABC transporter permease SapC;protein_id=WP_001146163.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 27004 27969 . - . ID=gene-AC00_RS17250;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=AC00_RS17250;old_locus_tag=AC00_1445 NZ_JJLU01000048.1 Protein Homology CDS 27004 27969 . - 0 ID=cds-WP_000583277.1;Parent=gene-AC00_RS17250;Dbxref=GenBank:WP_000583277.1;Name=WP_000583277.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=AC00_RS17250;product=putrescine export ABC transporter permease SapB;protein_id=WP_000583277.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 27966 29609 . - . ID=gene-AC00_RS17245;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=AC00_RS17245;old_locus_tag=AC00_1446 NZ_JJLU01000048.1 Protein Homology CDS 27966 29609 . - 0 ID=cds-WP_032280807.1;Parent=gene-AC00_RS17245;Dbxref=GenBank:WP_032280807.1;Name=WP_032280807.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415810.1;locus_tag=AC00_RS17245;product=ABC transporter substrate-binding protein SapA;protein_id=WP_032280807.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 29921 30166 . - . ID=gene-AC00_RS17240;Name=ymjA;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=AC00_RS17240;old_locus_tag=AC00_1447 NZ_JJLU01000048.1 Protein Homology CDS 29921 30166 . - 0 ID=cds-WP_001015110.1;Parent=gene-AC00_RS17240;Dbxref=GenBank:WP_001015110.1;Name=WP_001015110.1;gbkey=CDS;gene=ymjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=AC00_RS17240;product=YmjA family protein;protein_id=WP_001015110.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 30300 31685 . - . ID=gene-AC00_RS17235;Name=puuP;gbkey=Gene;gene=puuP;gene_biotype=protein_coding;locus_tag=AC00_RS17235;old_locus_tag=AC00_1448 NZ_JJLU01000048.1 Protein Homology CDS 30300 31685 . - 0 ID=cds-WP_000996858.1;Parent=gene-AC00_RS17235;Dbxref=GenBank:WP_000996858.1;Name=WP_000996858.1;gbkey=CDS;gene=puuP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707205.2;locus_tag=AC00_RS17235;product=putrescine/proton symporter PuuP;protein_id=WP_000996858.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 31675 31839 . - . ID=gene-AC00_RS30255;Name=AC00_RS30255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30255 NZ_JJLU01000048.1 Protein Homology CDS 31675 31839 . - 0 ID=cds-WP_120795382.1;Parent=gene-AC00_RS30255;Dbxref=GenBank:WP_120795382.1;Name=WP_120795382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518772.1;locus_tag=AC00_RS30255;product=protein YmjE;protein_id=WP_120795382.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 31988 33406 . - . ID=gene-AC00_RS17230;Name=puuA;gbkey=Gene;gene=puuA;gene_biotype=protein_coding;locus_tag=AC00_RS17230;old_locus_tag=AC00_1449 NZ_JJLU01000048.1 Protein Homology CDS 31988 33406 . - 0 ID=cds-WP_001307767.1;Parent=gene-AC00_RS17230;Dbxref=GenBank:WP_001307767.1;Name=WP_001307767.1;gbkey=CDS;gene=puuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309901.2;locus_tag=AC00_RS17230;product=glutamate-putrescine ligase;protein_id=WP_001307767.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 33618 34382 . + . ID=gene-AC00_RS17225;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=AC00_RS17225;old_locus_tag=AC00_1451 NZ_JJLU01000048.1 Protein Homology CDS 33618 34382 . + 0 ID=cds-WP_001307158.1;Parent=gene-AC00_RS17225;Dbxref=GenBank:WP_001307158.1;Name=WP_001307158.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415814.4;locus_tag=AC00_RS17225;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_001307158.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 34409 34966 . + . ID=gene-AC00_RS17220;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=AC00_RS17220;old_locus_tag=AC00_1452 NZ_JJLU01000048.1 Protein Homology CDS 34409 34966 . + 0 ID=cds-WP_032280810.1;Parent=gene-AC00_RS17220;Dbxref=GenBank:WP_032280810.1;Name=WP_032280810.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=AC00_RS17220;product=HTH-type transcriptional regulator PuuR;protein_id=WP_032280810.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 35116 36603 . + . ID=gene-AC00_RS17215;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=AC00_RS17215;old_locus_tag=AC00_1453 NZ_JJLU01000048.1 Protein Homology CDS 35116 36603 . + 0 ID=cds-WP_032288189.1;Parent=gene-AC00_RS17215;Dbxref=GenBank:WP_032288189.1;Name=WP_032288189.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415816.1;locus_tag=AC00_RS17215;product=aldehyde dehydrogenase PuuC;protein_id=WP_032288189.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 36605 37885 . + . ID=gene-AC00_RS17210;Name=puuB;gbkey=Gene;gene=puuB;gene_biotype=protein_coding;locus_tag=AC00_RS17210;old_locus_tag=AC00_1454 NZ_JJLU01000048.1 Protein Homology CDS 36605 37885 . + 0 ID=cds-WP_032280812.1;Parent=gene-AC00_RS17210;Dbxref=GenBank:WP_032280812.1;Name=WP_032280812.1;gbkey=CDS;gene=puuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415817.1;locus_tag=AC00_RS17210;product=gamma-glutamylputrescine oxidase;protein_id=WP_032280812.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 37923 39188 . + . ID=gene-AC00_RS17205;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=AC00_RS17205;old_locus_tag=AC00_1455 NZ_JJLU01000048.1 Protein Homology CDS 37923 39188 . + 0 ID=cds-WP_032280813.1;Parent=gene-AC00_RS17205;Dbxref=GenBank:WP_032280813.1;Name=WP_032280813.1;Ontology_term=GO:0009448;gbkey=CDS;gene=puuE;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309906.1;locus_tag=AC00_RS17205;product=4-aminobutyrate transaminase;protein_id=WP_032280813.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 39319 40296 . - . ID=gene-AC00_RS17200;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=AC00_RS17200;old_locus_tag=AC00_1456 NZ_JJLU01000048.1 Protein Homology CDS 39319 40296 . - 0 ID=cds-WP_000852835.1;Parent=gene-AC00_RS17200;Dbxref=GenBank:WP_000852835.1;Name=WP_000852835.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309907.2;locus_tag=AC00_RS17200;product=phage shock protein operon transcriptional activator;protein_id=WP_000852835.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 40463 41131 . + . ID=gene-AC00_RS17195;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=AC00_RS17195;old_locus_tag=AC00_1457 NZ_JJLU01000048.1 Protein Homology CDS 40463 41131 . + 0 ID=cds-WP_000511025.1;Parent=gene-AC00_RS17195;Dbxref=GenBank:WP_000511025.1;Name=WP_000511025.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309908.1;locus_tag=AC00_RS17195;product=phage shock protein PspA;protein_id=WP_000511025.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 41185 41409 . + . ID=gene-AC00_RS17190;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=AC00_RS17190;old_locus_tag=AC00_1458 NZ_JJLU01000048.1 Protein Homology CDS 41185 41409 . + 0 ID=cds-WP_001274963.1;Parent=gene-AC00_RS17190;Dbxref=GenBank:WP_001274963.1;Name=WP_001274963.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=AC00_RS17190;product=envelope stress response membrane protein PspB;protein_id=WP_001274963.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 41409 41768 . + . ID=gene-AC00_RS17185;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=AC00_RS17185;old_locus_tag=AC00_1459 NZ_JJLU01000048.1 Protein Homology CDS 41409 41768 . + 0 ID=cds-WP_021556754.1;Parent=gene-AC00_RS17185;Dbxref=GenBank:WP_021556754.1;Name=WP_021556754.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=AC00_RS17185;product=envelope stress response membrane protein PspC;protein_id=WP_021556754.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 41777 41998 . + . ID=gene-AC00_RS17180;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=AC00_RS17180;old_locus_tag=AC00_1460 NZ_JJLU01000048.1 Protein Homology CDS 41777 41998 . + 0 ID=cds-WP_001295585.1;Parent=gene-AC00_RS17180;Dbxref=GenBank:WP_001295585.1;Name=WP_001295585.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309911.1;locus_tag=AC00_RS17180;product=phage shock protein PspD;protein_id=WP_001295585.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 42073 42387 . + . ID=gene-AC00_RS17175;Name=pspE;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=AC00_RS17175;old_locus_tag=AC00_1461 NZ_JJLU01000048.1 Protein Homology CDS 42073 42387 . + 0 ID=cds-WP_000473109.1;Parent=gene-AC00_RS17175;Dbxref=GenBank:WP_000473109.1;Name=WP_000473109.1;gbkey=CDS;gene=pspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415824.1;locus_tag=AC00_RS17175;product=thiosulfate sulfurtransferase PspE;protein_id=WP_000473109.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 42506 43903 . + . ID=gene-AC00_RS17170;Name=ycjX;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=AC00_RS17170;old_locus_tag=AC00_1462 NZ_JJLU01000048.1 Protein Homology CDS 42506 43903 . + 0 ID=cds-WP_000825763.1;Parent=gene-AC00_RS17170;Dbxref=GenBank:WP_000825763.1;Name=WP_000825763.1;gbkey=CDS;gene=ycjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=AC00_RS17170;product=YcjX family protein;protein_id=WP_000825763.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 43900 44961 . + . ID=gene-AC00_RS17165;Name=ycjF;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=AC00_RS17165;old_locus_tag=AC00_1463 NZ_JJLU01000048.1 Protein Homology CDS 43900 44961 . + 0 ID=cds-WP_001625127.1;Parent=gene-AC00_RS17165;Dbxref=GenBank:WP_001625127.1;Name=WP_001625127.1;gbkey=CDS;gene=ycjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415838.1;locus_tag=AC00_RS17165;product=YcjF family protein;protein_id=WP_001625127.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 45109 46650 . + . ID=gene-AC00_RS17160;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=AC00_RS17160;old_locus_tag=AC00_1464 NZ_JJLU01000048.1 Protein Homology CDS 45109 46650 . + 0 ID=cds-WP_001306544.1;Parent=gene-AC00_RS17160;Dbxref=GenBank:WP_001306544.1;Name=WP_001306544.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707228.2;locus_tag=AC00_RS17160;product=transcriptional regulator TyrR;protein_id=WP_001306544.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 46694 47200 . - . ID=gene-AC00_RS17155;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AC00_RS17155;old_locus_tag=AC00_1465 NZ_JJLU01000048.1 Protein Homology CDS 46694 47200 . - 0 ID=cds-WP_000084387.1;Parent=gene-AC00_RS17155;Dbxref=GenBank:WP_000084387.1;Name=WP_000084387.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=AC00_RS17155;product=thiol peroxidase;protein_id=WP_000084387.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 47319 48284 . + . ID=gene-AC00_RS17150;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=AC00_RS17150;old_locus_tag=AC00_1466 NZ_JJLU01000048.1 Protein Homology CDS 47319 48284 . + 0 ID=cds-WP_001442191.1;Parent=gene-AC00_RS17150;Dbxref=GenBank:WP_001442191.1;Name=WP_001442191.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707230.2;locus_tag=AC00_RS17150;product=L-Ala-D/L-Glu epimerase;protein_id=WP_001442191.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 48259 48987 . - . ID=gene-AC00_RS17145;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=AC00_RS17145;old_locus_tag=AC00_1467 NZ_JJLU01000048.1 Protein Homology CDS 48259 48987 . - 0 ID=cds-WP_000219122.1;Parent=gene-AC00_RS17145;Dbxref=GenBank:WP_000219122.1;Name=WP_000219122.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415842.2;locus_tag=AC00_RS17145;product=murein tripeptide amidase MpaA;protein_id=WP_000219122.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 49278 49916 . - . ID=gene-AC00_RS17140;Name=AC00_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17140;old_locus_tag=AC00_1468 NZ_JJLU01000048.1 Protein Homology CDS 49278 49916 . - 0 ID=cds-WP_024227165.1;Parent=gene-AC00_RS17140;Dbxref=GenBank:WP_024227165.1;Name=WP_024227165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707232.2;locus_tag=AC00_RS17140;product=SDR family oxidoreductase;protein_id=WP_024227165.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 49934 50866 . - . ID=gene-AC00_RS17135;Name=AC00_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17135;old_locus_tag=AC00_1469 NZ_JJLU01000048.1 Protein Homology CDS 49934 50866 . - 0 ID=cds-WP_032280814.1;Parent=gene-AC00_RS17135;Dbxref=GenBank:WP_032280814.1;Name=WP_032280814.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680621.1;locus_tag=AC00_RS17135;product=alpha/beta hydrolase;protein_id=WP_032280814.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 50866 51786 . - . ID=gene-AC00_RS17130;Name=AC00_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS17130;old_locus_tag=AC00_1470 NZ_JJLU01000048.1 Protein Homology CDS 50866 51786 . - 0 ID=cds-WP_032280815.1;Parent=gene-AC00_RS17130;Dbxref=GenBank:WP_032280815.1;Name=WP_032280815.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309936.2;locus_tag=AC00_RS17130;product=alpha/beta hydrolase;protein_id=WP_032280815.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 51924 52823 . + . ID=gene-AC00_RS17125;Name=pgrR;gbkey=Gene;gene=pgrR;gene_biotype=protein_coding;locus_tag=AC00_RS17125;old_locus_tag=AC00_1471 NZ_JJLU01000048.1 Protein Homology CDS 51924 52823 . + 0 ID=cds-WP_028131787.1;Parent=gene-AC00_RS17125;Dbxref=GenBank:WP_028131787.1;Name=WP_028131787.1;gbkey=CDS;gene=pgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309937.1;locus_tag=AC00_RS17125;product=DNA-binding transcriptional regulator PgrR;protein_id=WP_028131787.1;transl_table=11 NZ_JJLU01000048.1 RefSeq pseudogene 52921 52995 . + . ID=gene-AC00_RS31705;Name=AC00_RS31705;end_range=52995,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31705;partial=true;pseudo=true;start_range=.,52921 NZ_JJLU01000048.1 Protein Homology CDS 52921 52995 . + 0 ID=cds-AC00_RS31705;Parent=gene-AC00_RS31705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=52995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004170112.1;locus_tag=AC00_RS31705;partial=true;product=epoxyqueuosine reductase QueH;pseudo=true;start_range=.,52921;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 53160 54773 . + . ID=gene-AC00_RS17120;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=AC00_RS17120;old_locus_tag=AC00_1472 NZ_JJLU01000048.1 Protein Homology CDS 53160 54773 . + 0 ID=cds-WP_000683029.1;Parent=gene-AC00_RS17120;Dbxref=GenBank:WP_000683029.1;Name=WP_000683029.1;gbkey=CDS;gene=mppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=AC00_RS17120;product=murein tripeptide ABC transporter substrate-binding protein MppA;protein_id=WP_000683029.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 54824 55855 . - . ID=gene-AC00_RS17115;Name=ynaI;gbkey=Gene;gene=ynaI;gene_biotype=protein_coding;locus_tag=AC00_RS17115;old_locus_tag=AC00_1473 NZ_JJLU01000048.1 Protein Homology CDS 54824 55855 . - 0 ID=cds-WP_000559900.1;Parent=gene-AC00_RS17115;Dbxref=GenBank:WP_000559900.1;Name=WP_000559900.1;gbkey=CDS;gene=ynaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309939.1;locus_tag=AC00_RS17115;product=low conductance mechanosensitive channel YnaI;protein_id=WP_000559900.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 56099 56356 . + . ID=gene-AC00_RS17110;Name=ynaJ;gbkey=Gene;gene=ynaJ;gene_biotype=protein_coding;locus_tag=AC00_RS17110;old_locus_tag=AC00_1474 NZ_JJLU01000048.1 Protein Homology CDS 56099 56356 . + 0 ID=cds-WP_000605090.1;Parent=gene-AC00_RS17110;Dbxref=GenBank:WP_000605090.1;Name=WP_000605090.1;gbkey=CDS;gene=ynaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309940.1;locus_tag=AC00_RS17110;product=DUF2534 family protein;protein_id=WP_000605090.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 56406 57356 . - . ID=gene-AC00_RS17105;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=AC00_RS17105;old_locus_tag=AC00_1475 NZ_JJLU01000048.1 Protein Homology CDS 56406 57356 . - 0 ID=cds-WP_001262123.1;Parent=gene-AC00_RS17105;Dbxref=GenBank:WP_001262123.1;Name=WP_001262123.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=AC00_RS17105;product=universal stress protein UspE;protein_id=WP_001262123.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 57508 58260 . - . ID=gene-AC00_RS17100;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=AC00_RS17100;old_locus_tag=AC00_1476 NZ_JJLU01000048.1 Protein Homology CDS 57508 58260 . - 0 ID=cds-WP_000611911.1;Parent=gene-AC00_RS17100;Dbxref=GenBank:WP_000611911.1;Name=WP_000611911.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=AC00_RS17100;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611911.1;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 58455 58970 . - . ID=gene-AC00_RS17095;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=AC00_RS17095;old_locus_tag=AC00_1477 NZ_JJLU01000048.1 Protein Homology CDS 58455 58970 . - 0 ID=cds-WP_000945005.1;Parent=gene-AC00_RS17095;Dbxref=GenBank:WP_000945005.1;Name=WP_000945005.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=AC00_RS17095;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_000945005.1;transl_table=11 NZ_JJLU01000048.1 RefSeq pseudogene 58981 59124 . - . ID=gene-AC00_RS17090;Name=AC00_RS17090;end_range=59124,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17090;old_locus_tag=AC00_1478;partial=true;pseudo=true NZ_JJLU01000048.1 Protein Homology CDS 58981 59124 . - 0 ID=cds-AC00_RS17090;Parent=gene-AC00_RS17090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:1902604,GO:0015558;end_range=59124,.;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=AC00_RS17090;partial=true;product=AbgT family transporter;pseudo=true;transl_table=11 NZ_JJLU01000048.1 RefSeq gene 59373 59594 . + . ID=gene-AC00_RS27430;Name=AC00_RS27430;end_range=59594,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27430;old_locus_tag=AC00_1479;partial=true NZ_JJLU01000048.1 Protein Homology CDS 59373 59594 . + 0 ID=cds-WP_000179206.1-2;Parent=gene-AC00_RS27430;Dbxref=GenBank:WP_000179206.1;Name=WP_000179206.1;Ontology_term=GO:0006313;end_range=59594,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27430;partial=true;product=IS1 family transposase;protein_id=WP_000179206.1;transl_table=11 ##sequence-region NZ_JJLU01000049.1 1 6519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000049.1 RefSeq region 1 6519 . + . ID=NZ_JJLU01000049.1:1..6519;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000049.1 RefSeq pseudogene 1 366 . + . ID=gene-AC00_RS17085;Name=AC00_RS17085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17085;old_locus_tag=AC00_1480;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000049.1 Protein Homology CDS 1 366 . + 0 ID=cds-AC00_RS17085;Parent=gene-AC00_RS17085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS17085;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000049.1 RefSeq gene 457 504 . + . ID=gene-AC00_RS31175;Name=ydaN;gbkey=Gene;gene=ydaN;gene_biotype=protein_coding;locus_tag=AC00_RS31175 NZ_JJLU01000049.1 Protein Homology CDS 457 504 . + 0 ID=cds-WP_211180494.1;Parent=gene-AC00_RS31175;Dbxref=GenBank:WP_211180494.1;Name=WP_211180494.1;gbkey=CDS;gene=ydaN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051183.1;locus_tag=AC00_RS31175;product=protein YnaN;protein_id=WP_211180494.1;transl_table=11 NZ_JJLU01000049.1 RefSeq gene 518 1501 . + . ID=gene-AC00_RS17080;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=AC00_RS17080;old_locus_tag=AC00_1481 NZ_JJLU01000049.1 Protein Homology CDS 518 1501 . + 0 ID=cds-WP_000387388.1;Parent=gene-AC00_RS17080;Dbxref=GenBank:WP_000387388.1;Name=WP_000387388.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309953.1;locus_tag=AC00_RS17080;product=zinc transporter ZntB;protein_id=WP_000387388.1;transl_table=11 NZ_JJLU01000049.1 RefSeq gene 1776 1949 . + . ID=gene-AC00_RS30880;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=AC00_RS30880 NZ_JJLU01000049.1 Protein Homology CDS 1776 1949 . + 0 ID=cds-WP_001296046.1;Parent=gene-AC00_RS30880;Dbxref=GenBank:WP_001296046.1;Name=WP_001296046.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518775.1;locus_tag=AC00_RS30880;product=protein YnaL;protein_id=WP_001296046.1;transl_table=11 NZ_JJLU01000049.1 RefSeq gene 1979 3352 . + . ID=gene-AC00_RS17075;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=AC00_RS17075;old_locus_tag=AC00_1483 NZ_JJLU01000049.1 Protein Homology CDS 1979 3352 . + 0 ID=cds-WP_032280818.1;Parent=gene-AC00_RS17075;Dbxref=GenBank:WP_032280818.1;Name=WP_032280818.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309954.1;locus_tag=AC00_RS17075;product=ATP-dependent RNA helicase DbpA;protein_id=WP_032280818.1;transl_table=11 NZ_JJLU01000049.1 RefSeq gene 3481 4416 . - . ID=gene-AC00_RS17070;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=AC00_RS17070;old_locus_tag=AC00_1484 NZ_JJLU01000049.1 Protein Homology CDS 3481 4416 . - 0 ID=cds-WP_000081418.1;Parent=gene-AC00_RS17070;Dbxref=GenBank:WP_000081418.1;Name=WP_000081418.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707683.1;locus_tag=AC00_RS17070;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_000081418.1;transl_table=11 NZ_JJLU01000049.1 RefSeq gene 4592 5026 . - . ID=gene-AC00_RS17065;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=AC00_RS17065;old_locus_tag=AC00_1485 NZ_JJLU01000049.1 Protein Homology CDS 4592 5026 . - 0 ID=cds-WP_001295593.1;Parent=gene-AC00_RS17065;Dbxref=GenBank:WP_001295593.1;Name=WP_001295593.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310024.2;locus_tag=AC00_RS17065;product=universal stress protein UspF;protein_id=WP_001295593.1;transl_table=11 NZ_JJLU01000049.1 RefSeq pseudogene 5167 6210 . - . ID=gene-AC00_RS0124420;Name=ompN;end_range=6210,.;gbkey=Gene;gene=ompN;gene_biotype=pseudogene;locus_tag=AC00_RS0124420;old_locus_tag=AC00_1486;partial=true;pseudo=true NZ_JJLU01000049.1 Protein Homology CDS 5167 6210 . - 0 ID=cds-AC00_RS0124420;Parent=gene-AC00_RS0124420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6210,.;gbkey=CDS;gene=ompN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AC00_RS0124420;partial=true;product=porin OmpN;pseudo=true;transl_table=11 NZ_JJLU01000049.1 RefSeq pseudogene 6225 6519 . - . ID=gene-AC00_RS17060;Name=AC00_RS17060;end_range=6519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17060;old_locus_tag=AC00_1487;partial=true;pseudo=true NZ_JJLU01000049.1 Protein Homology CDS 6225 6519 . - 1 ID=cds-AC00_RS17060;Parent=gene-AC00_RS17060;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=6519,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS17060;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000050.1 1 10281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000050.1 RefSeq region 1 10281 . + . ID=NZ_JJLU01000050.1:1..10281;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000050.1 RefSeq pseudogene 1 563 . - . ID=gene-AC00_RS17055;Name=AC00_RS17055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17055;old_locus_tag=AC00_1488;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000050.1 Protein Homology CDS 1 563 . - 0 ID=cds-AC00_RS17055;Parent=gene-AC00_RS17055;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS17055;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000050.1 RefSeq pseudogene 620 718 . - . ID=gene-AC00_RS29450;Name=AC00_RS29450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29450;partial=true;pseudo=true;start_range=.,620 NZ_JJLU01000050.1 Protein Homology CDS 620 718 . - 0 ID=cds-AC00_RS29450;Parent=gene-AC00_RS29450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=AC00_RS29450;partial=true;product=hypothetical protein;pseudo=true;start_range=.,620;transl_table=11 NZ_JJLU01000050.1 RefSeq gene 1083 4607 . - . ID=gene-AC00_RS17050;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=AC00_RS17050;old_locus_tag=AC00_1489 NZ_JJLU01000050.1 Protein Homology CDS 1083 4607 . - 0 ID=cds-WP_032280820.1;Parent=gene-AC00_RS17050;Dbxref=GenBank:WP_032280820.1;Name=WP_032280820.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310027.1;locus_tag=AC00_RS17050;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_032280820.1;transl_table=11 NZ_JJLU01000050.1 RefSeq gene 4881 5147 . + . ID=gene-AC00_RS0124425;Name=ydbJ;gbkey=Gene;gene=ydbJ;gene_biotype=protein_coding;locus_tag=AC00_RS0124425 NZ_JJLU01000050.1 Protein Homology CDS 4881 5147 . + 0 ID=cds-WP_001295715.1;Parent=gene-AC00_RS0124425;Dbxref=GenBank:WP_001295715.1;Name=WP_001295715.1;gbkey=CDS;gene=ydbJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=AC00_RS0124425;product=putative hemolysin;protein_id=WP_001295715.1;transl_table=11 NZ_JJLU01000050.1 RefSeq gene 5144 5566 . - . ID=gene-AC00_RS17045;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=AC00_RS17045;old_locus_tag=AC00_1492 NZ_JJLU01000050.1 Protein Homology CDS 5144 5566 . - 0 ID=cds-WP_001298828.1;Parent=gene-AC00_RS17045;Dbxref=GenBank:WP_001298828.1;Name=WP_001298828.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415897.1;locus_tag=AC00_RS17045;product=heat shock protein HslJ;protein_id=WP_001298828.1;transl_table=11 NZ_JJLU01000050.1 RefSeq gene 5677 6666 . - . ID=gene-AC00_RS17040;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=AC00_RS17040;old_locus_tag=AC00_1493 NZ_JJLU01000050.1 Protein Homology CDS 5677 6666 . - 0 ID=cds-WP_000762229.1;Parent=gene-AC00_RS17040;Dbxref=GenBank:WP_000762229.1;Name=WP_000762229.1;gbkey=CDS;gene=ldhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310029.1;locus_tag=AC00_RS17040;product=D-lactate dehydrogenase;protein_id=WP_000762229.1;transl_table=11 NZ_JJLU01000050.1 RefSeq gene 6874 9513 . + . ID=gene-AC00_RS17035;Name=ydbH;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=AC00_RS17035;old_locus_tag=AC00_1494 NZ_JJLU01000050.1 Protein Homology CDS 6874 9513 . + 0 ID=cds-WP_032280821.1;Parent=gene-AC00_RS17035;Dbxref=GenBank:WP_032280821.1;Name=WP_032280821.1;gbkey=CDS;gene=ydbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310030.1;locus_tag=AC00_RS17035;product=YdbH family protein;protein_id=WP_032280821.1;transl_table=11 NZ_JJLU01000050.1 RefSeq gene 9510 9695 . + . ID=gene-AC00_RS17030;Name=ynbE;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=AC00_RS17030;old_locus_tag=AC00_1495 NZ_JJLU01000050.1 Protein Homology CDS 9510 9695 . + 0 ID=cds-WP_000706310.1;Parent=gene-AC00_RS17030;Dbxref=GenBank:WP_000706310.1;Name=WP_000706310.1;gbkey=CDS;gene=ynbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310031.1;locus_tag=AC00_RS17030;product=YnbE family lipoprotein;protein_id=WP_000706310.1;transl_table=11 NZ_JJLU01000050.1 RefSeq pseudogene 9703 9933 . + . ID=gene-AC00_RS17025;Name=AC00_RS17025;end_range=9933,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17025;old_locus_tag=AC00_1496;partial=true;pseudo=true NZ_JJLU01000050.1 Protein Homology CDS 9703 9933 . + 0 ID=cds-AC00_RS17025;Parent=gene-AC00_RS17025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=9933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310032.2;locus_tag=AC00_RS17025;partial=true;product=YdbL family protein;pseudo=true;transl_table=11 NZ_JJLU01000050.1 RefSeq pseudogene 9950 10281 . - . ID=gene-AC00_RS17020;Name=AC00_RS17020;end_range=10281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17020;old_locus_tag=AC00_1497;partial=true;pseudo=true NZ_JJLU01000050.1 Protein Homology CDS 9950 10281 . - 2 ID=cds-AC00_RS17020;Parent=gene-AC00_RS17020;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=10281,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS17020;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000051.1 1 5157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000051.1 RefSeq region 1 5157 . + . ID=NZ_JJLU01000051.1:1..5157;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000051.1 RefSeq pseudogene 1 297 . - . ID=gene-AC00_RS0124430;Name=AC00_RS0124430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124430;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000051.1 Protein Homology CDS 1 297 . - 0 ID=cds-AC00_RS0124430;Parent=gene-AC00_RS0124430;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124430;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000051.1 RefSeq pseudogene 348 2366 . + . ID=gene-AC00_RS17015;Name=AC00_RS17015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17015;old_locus_tag=AC00_1499;partial=true;pseudo=true;start_range=.,348 NZ_JJLU01000051.1 Protein Homology CDS 348 2366 . + 0 ID=cds-AC00_RS17015;Parent=gene-AC00_RS17015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335741.1;locus_tag=AC00_RS17015;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;start_range=.,348;transl_table=11 NZ_JJLU01000051.1 RefSeq gene 2586 3446 . + . ID=gene-AC00_RS17010;Name=pdxI;gbkey=Gene;gene=pdxI;gene_biotype=protein_coding;locus_tag=AC00_RS17010;old_locus_tag=AC00_1500 NZ_JJLU01000051.1 Protein Homology CDS 2586 3446 . + 0 ID=cds-WP_000097811.1;Parent=gene-AC00_RS17010;Dbxref=GenBank:WP_000097811.1;Name=WP_000097811.1;gbkey=CDS;gene=pdxI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310035.1;locus_tag=AC00_RS17010;product=pyridoxine 4-dehydrogenase;protein_id=WP_000097811.1;transl_table=11 NZ_JJLU01000051.1 RefSeq pseudogene 3510 4808 . + . ID=gene-AC00_RS17005;Name=AC00_RS17005;end_range=4808,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17005;old_locus_tag=AC00_1501;partial=true;pseudo=true NZ_JJLU01000051.1 Protein Homology CDS 3510 4808 . + 0 ID=cds-AC00_RS17005;Parent=gene-AC00_RS17005;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4808,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310036.2;locus_tag=AC00_RS17005;partial=true;product=polymer-forming cytoskeletal protein;pseudo=true;transl_table=11 NZ_JJLU01000051.1 RefSeq pseudogene 4864 5157 . + . ID=gene-AC00_RS0124435;Name=AC00_RS0124435;end_range=5157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124435;partial=true;pseudo=true NZ_JJLU01000051.1 Protein Homology CDS 4864 5157 . + 0 ID=cds-AC00_RS0124435;Parent=gene-AC00_RS0124435;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=5157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124435;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000052.1 1 44616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000052.1 RefSeq region 1 44616 . + . ID=NZ_JJLU01000052.1:1..44616;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000052.1 RefSeq pseudogene 1 288 . + . ID=gene-AC00_RS17000;Name=AC00_RS17000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS17000;old_locus_tag=AC00_1503;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000052.1 Protein Homology CDS 1 288 . + 0 ID=cds-AC00_RS17000;Parent=gene-AC00_RS17000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS17000;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000052.1 RefSeq pseudogene 304 1320 . + . ID=gene-AC00_RS16995;Name=AC00_RS16995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16995;old_locus_tag=AC00_1504;partial=true;pseudo=true;start_range=.,304 NZ_JJLU01000052.1 Protein Homology CDS 304 1320 . + 0 ID=cds-AC00_RS16995;Parent=gene-AC00_RS16995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310036.2;locus_tag=AC00_RS16995;partial=true;product=DUF2773 domain-containing protein;pseudo=true;start_range=.,304;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 1490 2095 . + . ID=gene-AC00_RS16990;Name=ynbA;gbkey=Gene;gene=ynbA;gene_biotype=protein_coding;locus_tag=AC00_RS16990;old_locus_tag=AC00_1505 NZ_JJLU01000052.1 Protein Homology CDS 1490 2095 . + 0 ID=cds-WP_032280824.1;Parent=gene-AC00_RS16990;Dbxref=GenBank:WP_032280824.1;Name=WP_032280824.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynbA;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310037.2;locus_tag=AC00_RS16990;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_032280824.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 2095 2991 . + . ID=gene-AC00_RS16985;Name=ynbB;gbkey=Gene;gene=ynbB;gene_biotype=protein_coding;locus_tag=AC00_RS16985;old_locus_tag=AC00_1506 NZ_JJLU01000052.1 Protein Homology CDS 2095 2991 . + 0 ID=cds-WP_000890953.1;Parent=gene-AC00_RS16985;Dbxref=GenBank:WP_000890953.1;Name=WP_000890953.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;gene=ynbB;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310038.1;locus_tag=AC00_RS16985;product=phosphatidate cytidylyltransferase;protein_id=WP_000890953.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 3007 4764 . + . ID=gene-AC00_RS16980;Name=ynbC;gbkey=Gene;gene=ynbC;gene_biotype=protein_coding;locus_tag=AC00_RS16980;old_locus_tag=AC00_1507 NZ_JJLU01000052.1 Protein Homology CDS 3007 4764 . + 0 ID=cds-WP_032280825.1;Parent=gene-AC00_RS16980;Dbxref=GenBank:WP_032280825.1;Name=WP_032280825.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;gene=ynbC;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310039.1;locus_tag=AC00_RS16980;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_032280825.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 4778 6070 . + . ID=gene-AC00_RS16975;Name=ynbD;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=AC00_RS16975;old_locus_tag=AC00_1508 NZ_JJLU01000052.1 Protein Homology CDS 4778 6070 . + 0 ID=cds-WP_032280842.1;Parent=gene-AC00_RS16975;Dbxref=GenBank:WP_032280842.1;Name=WP_032280842.1;gbkey=CDS;gene=ynbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415929.1;locus_tag=AC00_RS16975;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_032280842.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 6124 6729 . - . ID=gene-AC00_RS16970;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=AC00_RS16970;old_locus_tag=AC00_1509 NZ_JJLU01000052.1 Protein Homology CDS 6124 6729 . - 0 ID=cds-WP_000048948.1;Parent=gene-AC00_RS16970;Dbxref=GenBank:WP_000048948.1;Name=WP_000048948.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310041.1;locus_tag=AC00_RS16970;product=FMN-dependent NADH-azoreductase;protein_id=WP_000048948.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 6930 10832 . + . ID=gene-AC00_RS16965;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=AC00_RS16965;old_locus_tag=AC00_1510 NZ_JJLU01000052.1 Protein Homology CDS 6930 10832 . + 0 ID=cds-WP_032288190.1;Parent=gene-AC00_RS16965;Dbxref=GenBank:WP_032288190.1;Name=WP_032288190.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=AC00_RS16965;product=ATP-dependent RNA helicase HrpA;protein_id=WP_032288190.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 11104 11904 . + . ID=gene-AC00_RS16960;Name=ydcF;gbkey=Gene;gene=ydcF;gene_biotype=protein_coding;locus_tag=AC00_RS16960;old_locus_tag=AC00_1511 NZ_JJLU01000052.1 Protein Homology CDS 11104 11904 . + 0 ID=cds-WP_032280826.1;Parent=gene-AC00_RS16960;Dbxref=GenBank:WP_032280826.1;Name=WP_032280826.1;gbkey=CDS;gene=ydcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310047.1;locus_tag=AC00_RS16960;product=DUF218 domain-containing protein YdcF;protein_id=WP_032280826.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 12101 13540 . + . ID=gene-AC00_RS16955;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=AC00_RS16955;old_locus_tag=AC00_1512 NZ_JJLU01000052.1 Protein Homology CDS 12101 13540 . + 0 ID=cds-WP_032280827.1;Parent=gene-AC00_RS16955;Dbxref=GenBank:WP_032280827.1;Name=WP_032280827.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=AC00_RS16955;product=aldehyde dehydrogenase;protein_id=WP_032280827.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 13583 14584 . - . ID=gene-AC00_RS16950;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AC00_RS16950;old_locus_tag=AC00_1513 NZ_JJLU01000052.1 Protein Homology CDS 13583 14584 . - 0 ID=cds-WP_000048684.1;Parent=gene-AC00_RS16950;Dbxref=GenBank:WP_000048684.1;Name=WP_000048684.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310049.1;locus_tag=AC00_RS16950;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000048684.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 14773 15303 . + . ID=gene-AC00_RS16945;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=AC00_RS16945;old_locus_tag=AC00_1514 NZ_JJLU01000052.1 Protein Homology CDS 14773 15303 . + 0 ID=cds-WP_032288191.1;Parent=gene-AC00_RS16945;Dbxref=GenBank:WP_032288191.1;Name=WP_032288191.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415935.2;locus_tag=AC00_RS16945;product=cytochrome b561;protein_id=WP_032288191.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 15548 15721 . + . ID=gene-AC00_RS16940;Name=AC00_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16940;old_locus_tag=AC00_1515 NZ_JJLU01000052.1 Protein Homology CDS 15548 15721 . + 0 ID=cds-WP_000731833.1;Parent=gene-AC00_RS16940;Dbxref=GenBank:WP_000731833.1;Name=WP_000731833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415936.1;locus_tag=AC00_RS16940;product=periplasmic protein;protein_id=WP_000731833.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 15747 15815 . + . ID=gene-AC00_RS31180;Name=AC00_RS31180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31180 NZ_JJLU01000052.1 Protein Homology CDS 15747 15815 . + 0 ID=cds-WP_212981652.1;Parent=gene-AC00_RS31180;Dbxref=GenBank:WP_212981652.1;Name=WP_212981652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051184.1;locus_tag=AC00_RS31180;product=hypothetical protein;protein_id=WP_212981652.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 15793 15942 . - . ID=gene-AC00_RS0124440;Name=hokB;gbkey=Gene;gene=hokB;gene_biotype=protein_coding;locus_tag=AC00_RS0124440 NZ_JJLU01000052.1 Protein Homology CDS 15793 15942 . - 0 ID=cds-WP_001309484.1;Parent=gene-AC00_RS0124440;Dbxref=GenBank:WP_001309484.1;Name=WP_001309484.1;gbkey=CDS;gene=hokB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025301.1;locus_tag=AC00_RS0124440;product=type I toxin-antitoxin system toxin HokB;protein_id=WP_001309484.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 16341 17981 . + . ID=gene-AC00_RS16935;Name=trg;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=AC00_RS16935;old_locus_tag=AC00_1516 NZ_JJLU01000052.1 Protein Homology CDS 16341 17981 . + 0 ID=cds-WP_032280829.1;Parent=gene-AC00_RS16935;Dbxref=GenBank:WP_032280829.1;Name=WP_032280829.1;gbkey=CDS;gene=trg;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415938.1;locus_tag=AC00_RS16935;product=methyl-accepting chemotaxis protein Trg;protein_id=WP_032280829.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 18019 18942 . - . ID=gene-AC00_RS16930;Name=ydcI;gbkey=Gene;gene=ydcI;gene_biotype=protein_coding;locus_tag=AC00_RS16930;old_locus_tag=AC00_1517 NZ_JJLU01000052.1 Protein Homology CDS 18019 18942 . - 0 ID=cds-WP_000414566.1;Parent=gene-AC00_RS16930;Dbxref=GenBank:WP_000414566.1;Name=WP_000414566.1;gbkey=CDS;gene=ydcI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310054.2;locus_tag=AC00_RS16930;product=LysR substrate-binding domain-containing protein;protein_id=WP_000414566.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 19159 20502 . + . ID=gene-AC00_RS16925;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=AC00_RS16925;old_locus_tag=AC00_1518 NZ_JJLU01000052.1 Protein Homology CDS 19159 20502 . + 0 ID=cds-WP_032280830.1;Parent=gene-AC00_RS16925;Dbxref=GenBank:WP_032280830.1;Name=WP_032280830.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310055.1;locus_tag=AC00_RS16925;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_032280830.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 20727 22382 . + . ID=gene-AC00_RS16920;Name=opgD;gbkey=Gene;gene=opgD;gene_biotype=protein_coding;gene_synonym=mdoD;locus_tag=AC00_RS16920;old_locus_tag=AC00_1519 NZ_JJLU01000052.1 Protein Homology CDS 20727 22382 . + 0 ID=cds-WP_000375956.1;Parent=gene-AC00_RS16920;Dbxref=GenBank:WP_000375956.1;Name=WP_000375956.1;gbkey=CDS;gene=opgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707648.1;locus_tag=AC00_RS16920;product=glucan biosynthesis protein OpgD;protein_id=WP_000375956.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 22522 22746 . + . ID=gene-AC00_RS16915;Name=ydcH;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=AC00_RS16915;old_locus_tag=AC00_1520 NZ_JJLU01000052.1 Protein Homology CDS 22522 22746 . + 0 ID=cds-WP_001296778.1;Parent=gene-AC00_RS16915;Dbxref=GenBank:WP_001296778.1;Name=WP_001296778.1;gbkey=CDS;gene=ydcH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415943.4;locus_tag=AC00_RS16915;product=YdcH family protein;protein_id=WP_001296778.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 22809 23345 . + . ID=gene-AC00_RS16910;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=AC00_RS16910;old_locus_tag=AC00_1521 NZ_JJLU01000052.1 Protein Homology CDS 22809 23345 . + 0 ID=cds-WP_000140877.1;Parent=gene-AC00_RS16910;Dbxref=GenBank:WP_000140877.1;Name=WP_000140877.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707645.2;locus_tag=AC00_RS16910;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_000140877.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 23340 24320 . - . ID=gene-AC00_RS16905;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=AC00_RS16905;old_locus_tag=AC00_1522 NZ_JJLU01000052.1 Protein Homology CDS 23340 24320 . - 0 ID=cds-WP_032280831.1;Parent=gene-AC00_RS16905;Dbxref=GenBank:WP_032280831.1;Name=WP_032280831.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415945.1;locus_tag=AC00_RS16905;product=YdcK family protein;protein_id=WP_032280831.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 24444 25436 . + . ID=gene-AC00_RS16900;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=AC00_RS16900;old_locus_tag=AC00_1523 NZ_JJLU01000052.1 Protein Homology CDS 24444 25436 . + 0 ID=cds-WP_001296725.1;Parent=gene-AC00_RS16900;Dbxref=GenBank:WP_001296725.1;Name=WP_001296725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310061.1;locus_tag=AC00_RS16900;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_001296725.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 25433 26026 . + . ID=gene-AC00_RS16895;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=AC00_RS16895;old_locus_tag=AC00_1524 NZ_JJLU01000052.1 Protein Homology CDS 25433 26026 . + 0 ID=cds-WP_001723473.1;Parent=gene-AC00_RS16895;Dbxref=GenBank:WP_001723473.1;Name=WP_001723473.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415947.1;locus_tag=AC00_RS16895;product=tellurite resistance methyltransferase TehB;protein_id=WP_001723473.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 26330 26998 . + . ID=gene-AC00_RS16890;Name=ydcL;gbkey=Gene;gene=ydcL;gene_biotype=protein_coding;locus_tag=AC00_RS16890;old_locus_tag=AC00_1525 NZ_JJLU01000052.1 Protein Homology CDS 26330 26998 . + 0 ID=cds-WP_032280832.1;Parent=gene-AC00_RS16890;Dbxref=GenBank:WP_032280832.1;Name=WP_032280832.1;gbkey=CDS;gene=ydcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310063.1;locus_tag=AC00_RS16890;product=DUF3313 domain-containing protein;protein_id=WP_032280832.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 27033 28250 . - . ID=gene-AC00_RS16885;Name=ydcO;gbkey=Gene;gene=ydcO;gene_biotype=protein_coding;locus_tag=AC00_RS16885;old_locus_tag=AC00_1526 NZ_JJLU01000052.1 Protein Homology CDS 27033 28250 . - 0 ID=cds-WP_071999230.1;Parent=gene-AC00_RS16885;Dbxref=GenBank:WP_071999230.1;Name=WP_071999230.1;gbkey=CDS;gene=ydcO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012601493.1;locus_tag=AC00_RS16885;product=BenE family transporter YdcO;protein_id=WP_071999230.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 28303 28839 . + . ID=gene-AC00_RS16880;Name=sutR;gbkey=Gene;gene=sutR;gene_biotype=protein_coding;locus_tag=AC00_RS16880;old_locus_tag=AC00_1527 NZ_JJLU01000052.1 Protein Homology CDS 28303 28839 . + 0 ID=cds-WP_000429152.1;Parent=gene-AC00_RS16880;Dbxref=GenBank:WP_000429152.1;Name=WP_000429152.1;gbkey=CDS;gene=sutR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415951.1;locus_tag=AC00_RS16880;product=DNA-binding transcriptional regulator SutR;protein_id=WP_000429152.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 28912 30873 . + . ID=gene-AC00_RS16875;Name=rlhA;gbkey=Gene;gene=rlhA;gene_biotype=protein_coding;locus_tag=AC00_RS16875;old_locus_tag=AC00_1528 NZ_JJLU01000052.1 Protein Homology CDS 28912 30873 . + 0 ID=cds-WP_032280834.1;Parent=gene-AC00_RS16875;Dbxref=GenBank:WP_032280834.1;Name=WP_032280834.1;gbkey=CDS;gene=rlhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415952.2;locus_tag=AC00_RS16875;product=23S rRNA 5-hydroxycytidine C2501 synthase;protein_id=WP_032280834.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 30965 31195 . - . ID=gene-AC00_RS16870;Name=yncJ;gbkey=Gene;gene=yncJ;gene_biotype=protein_coding;locus_tag=AC00_RS16870;old_locus_tag=AC00_1529 NZ_JJLU01000052.1 Protein Homology CDS 30965 31195 . - 0 ID=cds-WP_000494244.1;Parent=gene-AC00_RS16870;Dbxref=GenBank:WP_000494244.1;Name=WP_000494244.1;gbkey=CDS;gene=yncJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415953.1;locus_tag=AC00_RS16870;product=YncJ family protein;protein_id=WP_000494244.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 31417 31593 . + . ID=gene-AC00_RS0124450;Name=hicA;gbkey=Gene;gene=hicA;gene_biotype=protein_coding;locus_tag=AC00_RS0124450 NZ_JJLU01000052.1 Protein Homology CDS 31417 31593 . + 0 ID=cds-WP_000813793.1;Parent=gene-AC00_RS0124450;Dbxref=GenBank:WP_000813793.1;Name=WP_000813793.1;gbkey=CDS;gene=hicA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415954.2;locus_tag=AC00_RS0124450;product=type II toxin-antitoxin system mRNA interferase toxin HicA;protein_id=WP_000813793.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 31639 32055 . + . ID=gene-AC00_RS16865;Name=hicB;gbkey=Gene;gene=hicB;gene_biotype=protein_coding;locus_tag=AC00_RS16865;old_locus_tag=AC00_1531 NZ_JJLU01000052.1 Protein Homology CDS 31639 32055 . + 0 ID=cds-WP_077757373.1;Parent=gene-AC00_RS16865;Dbxref=GenBank:WP_077757373.1;Name=WP_077757373.1;gbkey=CDS;gene=hicB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415955.2;locus_tag=AC00_RS16865;product=type II toxin-antitoxin system antitoxin HicB;protein_id=WP_077757373.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 32134 33540 . + . ID=gene-AC00_RS16860;Name=ydcR;gbkey=Gene;gene=ydcR;gene_biotype=protein_coding;locus_tag=AC00_RS16860;old_locus_tag=AC00_1532 NZ_JJLU01000052.1 Protein Homology CDS 32134 33540 . + 0 ID=cds-WP_032280836.1;Parent=gene-AC00_RS16860;Dbxref=GenBank:WP_032280836.1;Name=WP_032280836.1;Ontology_term=GO:0030170;gbkey=CDS;gene=ydcR;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310070.1;locus_tag=AC00_RS16860;product=PLP-dependent aminotransferase family protein;protein_id=WP_032280836.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 33785 34930 . + . ID=gene-AC00_RS16855;Name=ydcS;gbkey=Gene;gene=ydcS;gene_biotype=protein_coding;locus_tag=AC00_RS16855;old_locus_tag=AC00_1533 NZ_JJLU01000052.1 Protein Homology CDS 33785 34930 . + 0 ID=cds-WP_032280837.1;Parent=gene-AC00_RS16855;Dbxref=GenBank:WP_032280837.1;Name=WP_032280837.1;gbkey=CDS;gene=ydcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415957.1;locus_tag=AC00_RS16855;product=putative ABC transporter substrate-binding protein YdcS;protein_id=WP_032280837.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 34948 35961 . + . ID=gene-AC00_RS16850;Name=ydcT;gbkey=Gene;gene=ydcT;gene_biotype=protein_coding;locus_tag=AC00_RS16850;old_locus_tag=AC00_1534 NZ_JJLU01000052.1 Protein Homology CDS 34948 35961 . + 0 ID=cds-WP_032288192.1;Parent=gene-AC00_RS16850;Dbxref=GenBank:WP_032288192.1;Name=WP_032288192.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=ydcT;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310072.1;locus_tag=AC00_RS16850;product=ABC transporter ATP-binding protein;protein_id=WP_032288192.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 35962 36903 . + . ID=gene-AC00_RS16845;Name=ydcU;gbkey=Gene;gene=ydcU;gene_biotype=protein_coding;locus_tag=AC00_RS16845;old_locus_tag=AC00_1535 NZ_JJLU01000052.1 Protein Homology CDS 35962 36903 . + 0 ID=cds-WP_001251315.1;Parent=gene-AC00_RS16845;Dbxref=GenBank:WP_001251315.1;Name=WP_001251315.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310073.1;locus_tag=AC00_RS16845;product=ABC transporter permease;protein_id=WP_001251315.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 36893 37687 . + . ID=gene-AC00_RS16840;Name=ydcV;gbkey=Gene;gene=ydcV;gene_biotype=protein_coding;locus_tag=AC00_RS16840;old_locus_tag=AC00_1536 NZ_JJLU01000052.1 Protein Homology CDS 36893 37687 . + 0 ID=cds-WP_000555458.1;Parent=gene-AC00_RS16840;Dbxref=GenBank:WP_000555458.1;Name=WP_000555458.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=ydcV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415960.1;locus_tag=AC00_RS16840;product=ABC transporter permease;protein_id=WP_000555458.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 37709 39133 . + . ID=gene-AC00_RS16835;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=AC00_RS16835;old_locus_tag=AC00_1537 NZ_JJLU01000052.1 Protein Homology CDS 37709 39133 . + 0 ID=cds-WP_001163882.1;Parent=gene-AC00_RS16835;Dbxref=GenBank:WP_001163882.1;Name=WP_001163882.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310075.1;locus_tag=AC00_RS16835;product=aminobutyraldehyde dehydrogenase;protein_id=WP_001163882.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 39343 40152 . + . ID=gene-AC00_RS16830;Name=AC00_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16830;old_locus_tag=AC00_1538 NZ_JJLU01000052.1 Protein Homology CDS 39343 40152 . + 0 ID=cds-WP_000867989.1;Parent=gene-AC00_RS16830;Dbxref=GenBank:WP_000867989.1;Name=WP_000867989.1;Ontology_term=GO:0046677,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707637.1;locus_tag=AC00_RS16830;product=CatB-related O-acetyltransferase;protein_id=WP_000867989.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 40554 40649 . - . ID=gene-AC00_RS27460;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=AC00_RS27460 NZ_JJLU01000052.1 Protein Homology CDS 40554 40649 . - 0 ID=cds-WP_001303494.1;Parent=gene-AC00_RS27460;Dbxref=GenBank:WP_001303494.1;Name=WP_001303494.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165318.1;locus_tag=AC00_RS27460;product=stress response membrane protein YncL;protein_id=WP_001303494.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 40844 41017 . + . ID=gene-AC00_RS0124460;Name=ortT;gbkey=Gene;gene=ortT;gene_biotype=protein_coding;locus_tag=AC00_RS0124460;old_locus_tag=AC00_1539 NZ_JJLU01000052.1 Protein Homology CDS 40844 41017 . + 0 ID=cds-WP_001595729.1;Parent=gene-AC00_RS0124460;Dbxref=GenBank:WP_001595729.1;Name=WP_001595729.1;gbkey=CDS;gene=ortT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=AC00_RS0124460;product=orphan toxin OrtT;protein_id=WP_001595729.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 41103 41336 . + . ID=gene-AC00_RS16825;Name=ydcY;gbkey=Gene;gene=ydcY;gene_biotype=protein_coding;locus_tag=AC00_RS16825;old_locus_tag=AC00_1540 NZ_JJLU01000052.1 Protein Homology CDS 41103 41336 . + 0 ID=cds-WP_000018633.1;Parent=gene-AC00_RS16825;Dbxref=GenBank:WP_000018633.1;Name=WP_000018633.1;gbkey=CDS;gene=ydcY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=AC00_RS16825;product=DUF2526 family protein YdcY;protein_id=WP_000018633.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 41337 41786 . - . ID=gene-AC00_RS16820;Name=ydcZ;gbkey=Gene;gene=ydcZ;gene_biotype=protein_coding;locus_tag=AC00_RS16820;old_locus_tag=AC00_1541 NZ_JJLU01000052.1 Protein Homology CDS 41337 41786 . - 0 ID=cds-WP_001076540.1;Parent=gene-AC00_RS16820;Dbxref=GenBank:WP_001076540.1;Name=WP_001076540.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;gene=ydcZ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310078.1;locus_tag=AC00_RS16820;product=DMT family transporter;protein_id=WP_001076540.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 41783 42301 . - . ID=gene-AC00_RS16815;Name=mnaT;gbkey=Gene;gene=mnaT;gene_biotype=protein_coding;locus_tag=AC00_RS16815;old_locus_tag=AC00_1542 NZ_JJLU01000052.1 Protein Homology CDS 41783 42301 . - 0 ID=cds-WP_032280838.1;Parent=gene-AC00_RS16815;Dbxref=GenBank:WP_032280838.1;Name=WP_032280838.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=mnaT;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310079.1;locus_tag=AC00_RS16815;product=GNAT family N-acetyltransferase;protein_id=WP_032280838.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 42482 43522 . + . ID=gene-AC00_RS16810;Name=curA;gbkey=Gene;gene=curA;gene_biotype=protein_coding;locus_tag=AC00_RS16810;old_locus_tag=AC00_1543 NZ_JJLU01000052.1 Protein Homology CDS 42482 43522 . + 0 ID=cds-WP_032280839.1;Parent=gene-AC00_RS16810;Dbxref=GenBank:WP_032280839.1;Name=WP_032280839.1;gbkey=CDS;gene=curA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415966.6;locus_tag=AC00_RS16810;product=NADPH-dependent curcumin/dihydrocurcumin reductase;protein_id=WP_032280839.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 43720 44376 . + . ID=gene-AC00_RS16805;Name=mcbR;gbkey=Gene;gene=mcbR;gene_biotype=protein_coding;locus_tag=AC00_RS16805;old_locus_tag=AC00_1544 NZ_JJLU01000052.1 Protein Homology CDS 43720 44376 . + 0 ID=cds-WP_032280840.1;Parent=gene-AC00_RS16805;Dbxref=GenBank:WP_032280840.1;Name=WP_032280840.1;gbkey=CDS;gene=mcbR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070425.1;locus_tag=AC00_RS16805;product=colanic acid/biofilm transcriptional regulator McbR;protein_id=WP_032280840.1;transl_table=11 NZ_JJLU01000052.1 RefSeq gene 44405 44616 . + . ID=gene-AC00_RS27475;Name=AC00_RS27475;end_range=44616,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27475;old_locus_tag=AC00_1545;partial=true NZ_JJLU01000052.1 Protein Homology CDS 44405 44616 . + 0 ID=cds-WP_000179205.1-2;Parent=gene-AC00_RS27475;Dbxref=GenBank:WP_000179205.1;Name=WP_000179205.1;Ontology_term=GO:0006313;end_range=44616,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27475;partial=true;product=IS1 family transposase;protein_id=WP_000179205.1;transl_table=11 ##sequence-region NZ_JJLU01000053.1 1 30675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000053.1 RefSeq region 1 30675 . + . ID=NZ_JJLU01000053.1:1..30675;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000053.1 RefSeq pseudogene 1 140 . + . ID=gene-AC00_RS29455;Name=AC00_RS29455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29455;old_locus_tag=AC00_1546;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000053.1 Protein Homology CDS 1 140 . + 2 ID=cds-AC00_RS29455;Parent=gene-AC00_RS29455;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS29455;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 311 1414 . - . ID=gene-AC00_RS16795;Name=zorE;gbkey=Gene;gene=zorE;gene_biotype=protein_coding;locus_tag=AC00_RS16795;old_locus_tag=AC00_1547 NZ_JJLU01000053.1 Protein Homology CDS 311 1414 . - 0 ID=cds-WP_032282174.1;Parent=gene-AC00_RS16795;Dbxref=GenBank:WP_032282174.1;Name=WP_032282174.1;Ontology_term=GO:0051607;gbkey=CDS;gene=zorE;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313283.1;locus_tag=AC00_RS16795;product=type II Zorya anti-phage system protein ZorE;protein_id=WP_032282174.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 1418 2125 . - . ID=gene-AC00_RS16790;Name=zorB2;gbkey=Gene;gene=zorB2;gene_biotype=protein_coding;locus_tag=AC00_RS16790;old_locus_tag=AC00_1548 NZ_JJLU01000053.1 Protein Homology CDS 1418 2125 . - 0 ID=cds-WP_000357807.1;Parent=gene-AC00_RS16790;Dbxref=GenBank:WP_000357807.1;Name=WP_000357807.1;Ontology_term=GO:0051607;gbkey=CDS;gene=zorB2;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313284.1;locus_tag=AC00_RS16790;product=type II Zorya anti-phage system protein ZorB2;protein_id=WP_000357807.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 2132 3784 . - . ID=gene-AC00_RS16785;Name=zorA2;gbkey=Gene;gene=zorA2;gene_biotype=protein_coding;locus_tag=AC00_RS16785;old_locus_tag=AC00_1549 NZ_JJLU01000053.1 Protein Homology CDS 2132 3784 . - 0 ID=cds-WP_000880884.1;Parent=gene-AC00_RS16785;Dbxref=GenBank:WP_000880884.1;Name=WP_000880884.1;Ontology_term=GO:0051607;gbkey=CDS;gene=zorA2;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313285.1;locus_tag=AC00_RS16785;product=type II Zorya anti-phage system protein ZorA2;protein_id=WP_000880884.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 3996 7355 . + . ID=gene-AC00_RS16780;Name=AC00_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16780;old_locus_tag=AC00_1550 NZ_JJLU01000053.1 Protein Homology CDS 3996 7355 . + 0 ID=cds-WP_148725555.1;Parent=gene-AC00_RS16780;Dbxref=GenBank:WP_148725555.1;Name=WP_148725555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313286.2;locus_tag=AC00_RS16780;product=STY4851/ECs_5259 family protein;protein_id=WP_148725555.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 7355 13669 . + . ID=gene-AC00_RS16775;Name=AC00_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16775;old_locus_tag=AC00_1551 NZ_JJLU01000053.1 Protein Homology CDS 7355 13669 . + 0 ID=cds-WP_032288194.1;Parent=gene-AC00_RS16775;Dbxref=GenBank:WP_032288194.1;Name=WP_032288194.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313287.1;locus_tag=AC00_RS16775;product=DEAD/DEAH box helicase;protein_id=WP_032288194.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 13893 16751 . + . ID=gene-AC00_RS16770;Name=AC00_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16770;old_locus_tag=AC00_1553 NZ_JJLU01000053.1 Protein Homology CDS 13893 16751 . + 0 ID=cds-WP_032282177.1;Parent=gene-AC00_RS16770;Dbxref=GenBank:WP_032282177.1;Name=WP_032282177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313288.2;locus_tag=AC00_RS16770;product=DEAD/DEAH box helicase;protein_id=WP_032282177.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 16754 21676 . + . ID=gene-AC00_RS16765;Name=AC00_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16765;old_locus_tag=AC00_1554 NZ_JJLU01000053.1 Protein Homology CDS 16754 21676 . + 0 ID=cds-WP_032282178.1;Parent=gene-AC00_RS16765;Dbxref=GenBank:WP_032282178.1;Name=WP_032282178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001403882.1;locus_tag=AC00_RS16765;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_032282178.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 21676 28017 . + . ID=gene-AC00_RS16760;Name=AC00_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16760;old_locus_tag=AC00_1555 NZ_JJLU01000053.1 Protein Homology CDS 21676 28017 . + 0 ID=cds-WP_023281475.1;Parent=gene-AC00_RS16760;Dbxref=GenBank:WP_023281475.1;Name=WP_023281475.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313290.1;locus_tag=AC00_RS16760;product=DEAD/DEAH box helicase;protein_id=WP_023281475.1;transl_table=11 NZ_JJLU01000053.1 RefSeq gene 28014 30128 . + . ID=gene-AC00_RS16755;Name=AC00_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16755;old_locus_tag=AC00_1556 NZ_JJLU01000053.1 Protein Homology CDS 28014 30128 . + 0 ID=cds-WP_020219134.1;Parent=gene-AC00_RS16755;Dbxref=GenBank:WP_020219134.1;Name=WP_020219134.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313291.1;locus_tag=AC00_RS16755;product=UvrD-helicase domain-containing protein;protein_id=WP_020219134.1;transl_table=11 NZ_JJLU01000053.1 RefSeq pseudogene 30248 30675 . + . ID=gene-AC00_RS29465;Name=AC00_RS29465;end_range=30675,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29465;partial=true;pseudo=true NZ_JJLU01000053.1 Protein Homology CDS 30248 30675 . + 0 ID=cds-AC00_RS29465;Parent=gene-AC00_RS29465;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=30675,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC00_RS29465;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000054.1 1 22742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000054.1 RefSeq region 1 22742 . + . ID=NZ_JJLU01000054.1:1..22742;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000054.1 RefSeq pseudogene 1 301 . + . ID=gene-AC00_RS16745;Name=AC00_RS16745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16745;old_locus_tag=AC00_1558;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000054.1 Protein Homology CDS 1 301 . + 1 ID=cds-AC00_RS16745;Parent=gene-AC00_RS16745;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014654019.1;locus_tag=AC00_RS16745;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 381 2483 . - . ID=gene-AC00_RS16740;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=AC00_RS16740;old_locus_tag=AC00_1559 NZ_JJLU01000054.1 Protein Homology CDS 381 2483 . - 0 ID=cds-WP_032280844.1;Parent=gene-AC00_RS16740;Dbxref=GenBank:WP_032280844.1;Name=WP_032280844.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415968.1;locus_tag=AC00_RS16740;product=TonB-dependent receptor PqqU;protein_id=WP_032280844.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 2725 3786 . + . ID=gene-AC00_RS16735;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=AC00_RS16735;old_locus_tag=AC00_1561 NZ_JJLU01000054.1 Protein Homology CDS 2725 3786 . + 0 ID=cds-WP_032280845.1;Parent=gene-AC00_RS16735;Dbxref=GenBank:WP_032280845.1;Name=WP_032280845.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=AC00_RS16735;product=YncE family protein;protein_id=WP_032280845.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 3909 5408 . - . ID=gene-AC00_RS16730;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=AC00_RS16730;old_locus_tag=AC00_1562 NZ_JJLU01000054.1 Protein Homology CDS 3909 5408 . - 0 ID=cds-WP_032280846.1;Parent=gene-AC00_RS16730;Dbxref=GenBank:WP_032280846.1;Name=WP_032280846.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310084.2;locus_tag=AC00_RS16730;product=L-asparagine permease;protein_id=WP_032280846.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 6383 6913 . + . ID=gene-AC00_RS0124465;Name=AC00_RS0124465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124465;old_locus_tag=AC00_1564 NZ_JJLU01000054.1 Protein Homology CDS 6383 6913 . + 0 ID=cds-WP_032280847.1;Parent=gene-AC00_RS0124465;Dbxref=GenBank:WP_032280847.1;Name=WP_032280847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248712.1;locus_tag=AC00_RS0124465;product=type IV secretion protein Rhs;protein_id=WP_032280847.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 6910 7266 . + . ID=gene-AC00_RS27500;Name=AC00_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27500 NZ_JJLU01000054.1 Protein Homology CDS 6910 7266 . + 0 ID=cds-WP_071999234.1;Parent=gene-AC00_RS27500;Dbxref=GenBank:WP_071999234.1;Name=WP_071999234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000819258.1;locus_tag=AC00_RS27500;product=hypothetical protein;protein_id=WP_071999234.1;transl_table=11 NZ_JJLU01000054.1 RefSeq pseudogene 7487 8935 . + . ID=gene-AC00_RS16725;Name=AC00_RS16725;end_range=8935,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16725;old_locus_tag=AC00_1565;partial=true;pseudo=true NZ_JJLU01000054.1 Protein Homology CDS 7487 8935 . + 0 ID=cds-AC00_RS16725;Parent=gene-AC00_RS16725;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103,GO:0033104;end_range=8935,.;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006342.1;locus_tag=AC00_RS16725;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;transl_table=11 NZ_JJLU01000054.1 RefSeq pseudogene 9087 9296 . - . ID=gene-AC00_RS0124470;Name=AC00_RS0124470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124470;partial=true;pseudo=true;start_range=.,9087 NZ_JJLU01000054.1 Protein Homology CDS 9087 9296 . - 0 ID=cds-AC00_RS0124470;Parent=gene-AC00_RS0124470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706526.1;locus_tag=AC00_RS0124470;partial=true;product=SymE family type I addiction module toxin;pseudo=true;start_range=.,9087;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 9610 10746 . + . ID=gene-AC00_RS16720;Name=ydcC;gbkey=Gene;gene=ydcC;gene_biotype=protein_coding;locus_tag=AC00_RS16720;old_locus_tag=AC00_1567 NZ_JJLU01000054.1 Protein Homology CDS 9610 10746 . + 0 ID=cds-WP_032280848.1;Parent=gene-AC00_RS16720;Dbxref=GenBank:WP_032280848.1;Name=WP_032280848.1;Ontology_term=GO:0004803;gbkey=CDS;gene=ydcC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000420980.1;locus_tag=AC00_RS16720;product=ISAs1 family transposase;protein_id=WP_032280848.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 11057 11284 . + . ID=gene-AC00_RS16715;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=AC00_RS16715;old_locus_tag=AC00_1568 NZ_JJLU01000054.1 Protein Homology CDS 11057 11284 . + 0 ID=cds-WP_001120141.1;Parent=gene-AC00_RS16715;Dbxref=GenBank:WP_001120141.1;Name=WP_001120141.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310091.1;locus_tag=AC00_RS16715;product=tautomerase PptA;protein_id=WP_001120141.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 11288 11857 . - . ID=gene-AC00_RS16710;Name=yddH;gbkey=Gene;gene=yddH;gene_biotype=protein_coding;locus_tag=AC00_RS16710;old_locus_tag=AC00_1569 NZ_JJLU01000054.1 Protein Homology CDS 11288 11857 . - 0 ID=cds-WP_032280849.1;Parent=gene-AC00_RS16710;Dbxref=GenBank:WP_032280849.1;Name=WP_032280849.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=yddH;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415979.2;locus_tag=AC00_RS16710;product=flavin reductase family protein;protein_id=WP_032280849.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 12030 12875 . + . ID=gene-AC00_RS16705;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=AC00_RS16705;old_locus_tag=AC00_1570 NZ_JJLU01000054.1 Protein Homology CDS 12030 12875 . + 0 ID=cds-WP_032280850.1;Parent=gene-AC00_RS16705;Dbxref=GenBank:WP_032280850.1;Name=WP_032280850.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415980.1;locus_tag=AC00_RS16705;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_032280850.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 12971 13864 . - . ID=gene-AC00_RS16700;Name=yddE;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=AC00_RS16700;old_locus_tag=AC00_1571 NZ_JJLU01000054.1 Protein Homology CDS 12971 13864 . - 0 ID=cds-WP_032288197.1;Parent=gene-AC00_RS16700;Dbxref=GenBank:WP_032288197.1;Name=WP_032288197.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;gene=yddE;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310094.1;locus_tag=AC00_RS16700;product=PhzF family isomerase;protein_id=WP_032288197.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 13943 14623 . - . ID=gene-AC00_RS16695;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=AC00_RS16695;old_locus_tag=AC00_1572 NZ_JJLU01000054.1 Protein Homology CDS 13943 14623 . - 0 ID=cds-WP_000617116.1;Parent=gene-AC00_RS16695;Dbxref=GenBank:WP_000617116.1;Name=WP_000617116.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310095.1;locus_tag=AC00_RS16695;product=respiratory nitrate reductase subunit gamma;protein_id=WP_000617116.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 14620 15315 . - . ID=gene-AC00_RS16690;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=AC00_RS16690;old_locus_tag=AC00_1573 NZ_JJLU01000054.1 Protein Homology CDS 14620 15315 . - 0 ID=cds-WP_032280852.1;Parent=gene-AC00_RS16690;Dbxref=GenBank:WP_032280852.1;Name=WP_032280852.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310096.1;locus_tag=AC00_RS16690;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_032280852.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 15315 16859 . - . ID=gene-AC00_RS16685;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=AC00_RS16685;old_locus_tag=AC00_1574 NZ_JJLU01000054.1 Protein Homology CDS 15315 16859 . - 0 ID=cds-WP_000702560.1;Parent=gene-AC00_RS16685;Dbxref=GenBank:WP_000702560.1;Name=WP_000702560.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310097.1;locus_tag=AC00_RS16685;product=nitrate reductase subunit beta;protein_id=WP_000702560.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 16856 20596 . - . ID=gene-AC00_RS16680;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=AC00_RS16680;old_locus_tag=AC00_1575 NZ_JJLU01000054.1 Protein Homology CDS 16856 20596 . - 0 ID=cds-WP_032280853.1;Parent=gene-AC00_RS16680;Dbxref=GenBank:WP_032280853.1;Name=WP_032280853.1;gbkey=CDS;gene=narZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310098.1;locus_tag=AC00_RS16680;product=nitrate reductase Z subunit alpha;protein_id=WP_032280853.1;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 20678 22066 . - . ID=gene-AC00_RS16675;Name=narU;gbkey=Gene;gene=narU;gene_biotype=protein_coding;locus_tag=AC00_RS16675;old_locus_tag=AC00_1576 NZ_JJLU01000054.1 Protein Homology CDS 20678 22066 . - 0 ID=cds-WP_001207917.1;Parent=gene-AC00_RS16675;Dbxref=GenBank:WP_001207917.1;Name=WP_001207917.1;gbkey=CDS;gene=narU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310099.1;locus_tag=AC00_RS16675;product=nitrate/nitrite transporter NarU;protein_id=WP_001207917.1;transl_table=11 NZ_JJLU01000054.1 RefSeq pseudogene 22387 22518 . - . ID=gene-AC00_RS30270;Name=AC00_RS30270;end_range=22518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30270;partial=true;pseudo=true NZ_JJLU01000054.1 Protein Homology CDS 22387 22518 . - 0 ID=cds-AC00_RS30270;Parent=gene-AC00_RS30270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=22518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000671707.1;locus_tag=AC00_RS30270;partial=true;product=leucine-rich repeat domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000054.1 RefSeq gene 22528 22742 . - . ID=gene-AC00_RS16670;Name=AC00_RS16670;end_range=22742,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16670;old_locus_tag=AC00_1577;partial=true NZ_JJLU01000054.1 Protein Homology CDS 22528 22742 . - 2 ID=cds-WP_000327107.1-2;Parent=gene-AC00_RS16670;Dbxref=GenBank:WP_000327107.1;Name=WP_000327107.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=22742,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS16670;partial=true;product=IS1 family transposase;protein_id=WP_000327107.1;transl_table=11 ##sequence-region NZ_JJLU01000055.1 1 1402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000055.1 RefSeq region 1 1402 . + . ID=NZ_JJLU01000055.1:1..1402;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000055.1 RefSeq gene 1 226 . - . ID=gene-AC00_RS0124485;Name=AC00_RS0124485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124485;old_locus_tag=AC00_1578;partial=true;start_range=.,1 NZ_JJLU01000055.1 Protein Homology CDS 1 226 . - 0 ID=cds-WP_001482752.1-2;Parent=gene-AC00_RS0124485;Dbxref=GenBank:WP_001482752.1;Name=WP_001482752.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558268.1;locus_tag=AC00_RS0124485;partial=true;product=IS1 family transposase;protein_id=WP_001482752.1;start_range=.,1;transl_table=11 NZ_JJLU01000055.1 RefSeq pseudogene 267 1085 . - . ID=gene-AC00_RS0124490;Name=AC00_RS0124490;end_range=1085,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124490;partial=true;pseudo=true;start_range=.,267 NZ_JJLU01000055.1 Protein Homology CDS 267 1085 . - 0 ID=cds-AC00_RS0124490;Parent=gene-AC00_RS0124490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1085,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310100.1;locus_tag=AC00_RS0124490;partial=true;product=leucine-rich repeat domain-containing protein;pseudo=true;start_range=.,267;transl_table=11 NZ_JJLU01000055.1 RefSeq pseudogene 1100 1402 . - . ID=gene-AC00_RS16665;Name=AC00_RS16665;end_range=1402,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16665;old_locus_tag=AC00_1580;partial=true;pseudo=true NZ_JJLU01000055.1 Protein Homology CDS 1100 1402 . - 0 ID=cds-AC00_RS16665;Parent=gene-AC00_RS16665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1402,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS16665;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000056.1 1 2301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000056.1 RefSeq region 1 2301 . + . ID=NZ_JJLU01000056.1:1..2301;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000056.1 RefSeq gene 1 265 . - . ID=gene-AC00_RS16660;Name=AC00_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16660;old_locus_tag=AC00_1581;partial=true;start_range=.,1 NZ_JJLU01000056.1 Protein Homology CDS 1 265 . - 0 ID=cds-WP_001508402.1-2;Parent=gene-AC00_RS16660;Dbxref=GenBank:WP_001508402.1;Name=WP_001508402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS16660;partial=true;product=IS1-like element transposase;protein_id=WP_001508402.1;start_range=.,1;transl_table=11 NZ_JJLU01000056.1 RefSeq pseudogene 322 666 . - . ID=gene-AC00_RS16655;Name=espR1;gbkey=Gene;gene=espR1;gene_biotype=pseudogene;locus_tag=AC00_RS16655;old_locus_tag=AC00_1582;partial=true;pseudo=true;start_range=.,322 NZ_JJLU01000056.1 Protein Homology CDS 322 666 . - 0 ID=cds-AC00_RS16655;Parent=gene-AC00_RS16655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=espR1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310100.1;locus_tag=AC00_RS16655;partial=true;product=T3SS effector leucine-rich repeat protein EspR1;pseudo=true;start_range=.,322;transl_table=11 NZ_JJLU01000056.1 RefSeq pseudogene 1110 1397 . - . ID=gene-AC00_RS31190;Name=AC00_RS31190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31190;partial=true;pseudo=true;start_range=.,1110 NZ_JJLU01000056.1 Protein Homology CDS 1110 1397 . - 0 ID=cds-AC00_RS31190;Parent=gene-AC00_RS31190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518781.1;locus_tag=AC00_RS31190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1110;transl_table=11 NZ_JJLU01000056.1 RefSeq gene 1484 1993 . - . ID=gene-AC00_RS16645;Name=AC00_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16645;old_locus_tag=AC00_1584 NZ_JJLU01000056.1 Protein Homology CDS 1484 1993 . - 0 ID=cds-WP_162721665.1;Parent=gene-AC00_RS16645;Dbxref=GenBank:WP_162721665.1;Name=WP_162721665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001359769.1;locus_tag=AC00_RS16645;product=leucine-rich repeat domain-containing protein;protein_id=WP_162721665.1;transl_table=11 NZ_JJLU01000056.1 RefSeq gene 2032 2301 . - . ID=gene-AC00_RS16640;Name=AC00_RS16640;end_range=2301,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16640;old_locus_tag=AC00_1585;partial=true NZ_JJLU01000056.1 Protein Homology CDS 2032 2301 . - 0 ID=cds-WP_000318104.1-2;Parent=gene-AC00_RS16640;Dbxref=GenBank:WP_000318104.1;Name=WP_000318104.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2301,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS16640;partial=true;product=IS1 family transposase;protein_id=WP_000318104.1;transl_table=11 ##sequence-region NZ_JJLU01000057.1 1 26640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000057.1 RefSeq region 1 26640 . + . ID=NZ_JJLU01000057.1:1..26640;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000057.1 RefSeq gene 1 227 . - . ID=gene-AC00_RS0124495;Name=AC00_RS0124495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124495;old_locus_tag=AC00_1586;partial=true;start_range=.,1 NZ_JJLU01000057.1 Protein Homology CDS 1 227 . - 0 ID=cds-WP_001396637.1;Parent=gene-AC00_RS0124495;Dbxref=GenBank:WP_001396637.1;Name=WP_001396637.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124495;partial=true;product=IS1 family transposase;protein_id=WP_001396637.1;start_range=.,1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 432 1532 . - . ID=gene-AC00_RS16635;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AC00_RS16635;old_locus_tag=AC00_1587 NZ_JJLU01000057.1 Protein Homology CDS 432 1532 . - 0 ID=cds-WP_000768395.1;Parent=gene-AC00_RS16635;Dbxref=GenBank:WP_000768395.1;Name=WP_000768395.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310103.1;locus_tag=AC00_RS16635;product=porin OmpC;protein_id=WP_000768395.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 1791 2672 . - . ID=gene-AC00_RS16630;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=AC00_RS16630;old_locus_tag=AC00_1588 NZ_JJLU01000057.1 Protein Homology CDS 1791 2672 . - 0 ID=cds-WP_071999235.1;Parent=gene-AC00_RS16630;Dbxref=GenBank:WP_071999235.1;Name=WP_071999235.1;gbkey=CDS;gene=yddG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415990.5;locus_tag=AC00_RS16630;product=aromatic amino acid efflux DMT transporter YddG;protein_id=WP_071999235.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 2904 5951 . + . ID=gene-AC00_RS16620;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AC00_RS16620;old_locus_tag=AC00_1590 NZ_JJLU01000057.1 Protein Homology CDS 2904 5951 . + 0 ID=cds-WP_012767733.1;Parent=gene-AC00_RS16620;Dbxref=GenBank:WP_012767733.1;Name=WP_012767733.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310105.1;locus_tag=AC00_RS16620;product=formate dehydrogenase-N subunit alpha;protein_id=WP_012767733.1;transl_except=(pos:3489..3491%2Caa:Sec);transl_table=11 NZ_JJLU01000057.1 RefSeq gene 5964 6848 . + . ID=gene-AC00_RS16615;Name=fdnH;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=AC00_RS16615;old_locus_tag=AC00_1591 NZ_JJLU01000057.1 Protein Homology CDS 5964 6848 . + 0 ID=cds-WP_001391970.1;Parent=gene-AC00_RS16615;Dbxref=GenBank:WP_001391970.1;Name=WP_001391970.1;gbkey=CDS;gene=fdnH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415992.1;locus_tag=AC00_RS16615;product=formate dehydrogenase N subunit beta;protein_id=WP_001391970.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 6841 7494 . + . ID=gene-AC00_RS16610;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=AC00_RS16610;old_locus_tag=AC00_1592 NZ_JJLU01000057.1 Protein Homology CDS 6841 7494 . + 0 ID=cds-WP_032280861.1;Parent=gene-AC00_RS16610;Dbxref=GenBank:WP_032280861.1;Name=WP_032280861.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310107.1;locus_tag=AC00_RS16610;product=formate dehydrogenase-N subunit gamma;protein_id=WP_032280861.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 7722 8006 . - . ID=gene-AC00_RS16605;Name=AC00_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16605;old_locus_tag=AC00_1593 NZ_JJLU01000057.1 Protein Homology CDS 7722 8006 . - 0 ID=cds-WP_000781370.1;Parent=gene-AC00_RS16605;Dbxref=GenBank:WP_000781370.1;Name=WP_000781370.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415994.4;locus_tag=AC00_RS16605;product=HigA family addiction module antitoxin;protein_id=WP_000781370.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 8006 8284 . - . ID=gene-AC00_RS0124500;Name=AC00_RS0124500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124500 NZ_JJLU01000057.1 Protein Homology CDS 8006 8284 . - 0 ID=cds-WP_000605676.1;Parent=gene-AC00_RS0124500;Dbxref=GenBank:WP_000605676.1;Name=WP_000605676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243168.1;locus_tag=AC00_RS0124500;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_000605676.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 8470 9480 . - . ID=gene-AC00_RS16600;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=AC00_RS16600;old_locus_tag=AC00_1595 NZ_JJLU01000057.1 Protein Homology CDS 8470 9480 . - 0 ID=cds-WP_032280862.1;Parent=gene-AC00_RS16600;Dbxref=GenBank:WP_032280862.1;Name=WP_032280862.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310109.2;locus_tag=AC00_RS16600;product=alcohol dehydrogenase AdhP;protein_id=WP_032280862.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 9614 11311 . - . ID=gene-AC00_RS16595;Name=maeA;gbkey=Gene;gene=maeA;gene_biotype=protein_coding;locus_tag=AC00_RS16595;old_locus_tag=AC00_1596 NZ_JJLU01000057.1 Protein Homology CDS 9614 11311 . - 0 ID=cds-WP_000433464.1;Parent=gene-AC00_RS16595;Dbxref=GenBank:WP_000433464.1;Name=WP_000433464.1;gbkey=CDS;gene=maeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707611.2;locus_tag=AC00_RS16595;product=malate dehydrogenase;protein_id=WP_000433464.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 11467 11604 . - . ID=gene-AC00_RS16590;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=AC00_RS16590;old_locus_tag=AC00_1598 NZ_JJLU01000057.1 Protein Homology CDS 11467 11604 . - 0 ID=cds-WP_000841554.1;Parent=gene-AC00_RS16590;Dbxref=GenBank:WP_000841554.1;Name=WP_000841554.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310111.1;locus_tag=AC00_RS16590;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_000841554.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 11706 11921 . - . ID=gene-AC00_RS16585;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=AC00_RS16585;old_locus_tag=AC00_1599 NZ_JJLU01000057.1 Protein Homology CDS 11706 11921 . - 0 ID=cds-WP_000495766.1;Parent=gene-AC00_RS16585;Dbxref=GenBank:WP_000495766.1;Name=WP_000495766.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310112.2;locus_tag=AC00_RS16585;product=biofilm-dependent modulation protein;protein_id=WP_000495766.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 12267 12698 . + . ID=gene-AC00_RS16580;Name=osmC;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=AC00_RS16580;old_locus_tag=AC00_1600 NZ_JJLU01000057.1 Protein Homology CDS 12267 12698 . + 0 ID=cds-WP_032280863.1;Parent=gene-AC00_RS16580;Dbxref=GenBank:WP_032280863.1;Name=WP_032280863.1;gbkey=CDS;gene=osmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415999.1;locus_tag=AC00_RS16580;product=peroxiredoxin OsmC;protein_id=WP_032280863.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 12754 13680 . - . ID=gene-AC00_RS16575;Name=AC00_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16575;old_locus_tag=AC00_1601 NZ_JJLU01000057.1 Protein Homology CDS 12754 13680 . - 0 ID=cds-WP_032280864.1;Parent=gene-AC00_RS16575;Dbxref=GenBank:WP_032280864.1;Name=WP_032280864.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416000.1;locus_tag=AC00_RS16575;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_032280864.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 13673 14659 . - . ID=gene-AC00_RS16570;Name=AC00_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16570;old_locus_tag=AC00_1602 NZ_JJLU01000057.1 Protein Homology CDS 13673 14659 . - 0 ID=cds-WP_032280865.1;Parent=gene-AC00_RS16570;Dbxref=GenBank:WP_032280865.1;Name=WP_032280865.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310115.1;locus_tag=AC00_RS16570;product=ABC transporter ATP-binding protein;protein_id=WP_032280865.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 14656 15552 . - . ID=gene-AC00_RS16565;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=AC00_RS16565;old_locus_tag=AC00_1603 NZ_JJLU01000057.1 Protein Homology CDS 14656 15552 . - 0 ID=cds-WP_032280866.1;Parent=gene-AC00_RS16565;Dbxref=GenBank:WP_032280866.1;Name=WP_032280866.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=AC00_RS16565;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_032280866.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 15549 16571 . - . ID=gene-AC00_RS16560;Name=AC00_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16560;old_locus_tag=AC00_1604 NZ_JJLU01000057.1 Protein Homology CDS 15549 16571 . - 0 ID=cds-WP_032280867.1;Parent=gene-AC00_RS16560;Dbxref=GenBank:WP_032280867.1;Name=WP_032280867.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=AC00_RS16560;product=ABC transporter permease;protein_id=WP_032280867.1;transl_table=11 NZ_JJLU01000057.1 RefSeq pseudogene 16573 18123 . - . ID=gene-AC00_RS0124505;Name=AC00_RS0124505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124505;pseudo=true NZ_JJLU01000057.1 Protein Homology CDS 16573 18123 . - 0 ID=cds-AC00_RS0124505;Parent=gene-AC00_RS0124505;Note=internal stop;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310118.1;locus_tag=AC00_RS0124505;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 18137 18718 . - . ID=gene-AC00_RS16555;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=AC00_RS16555;old_locus_tag=AC00_1607 NZ_JJLU01000057.1 Protein Homology CDS 18137 18718 . - 0 ID=cds-WP_001285825.1;Parent=gene-AC00_RS16555;Dbxref=GenBank:WP_001285825.1;Name=WP_001285825.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416005.1;locus_tag=AC00_RS16555;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_001285825.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 18976 21375 . - . ID=gene-AC00_RS16550;Name=dosP;gbkey=Gene;gene=dosP;gene_biotype=protein_coding;gene_synonym=pdeO;locus_tag=AC00_RS16550;old_locus_tag=AC00_1609 NZ_JJLU01000057.1 Protein Homology CDS 18976 21375 . - 0 ID=cds-WP_077757376.1;Parent=gene-AC00_RS16550;Dbxref=GenBank:WP_077757376.1;Name=WP_077757376.1;gbkey=CDS;gene=dosP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416006.4;locus_tag=AC00_RS16550;product=oxygen-sensing cyclic-di-GMP phosphodiesterase DosP;protein_id=WP_077757376.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 21400 22782 . - . ID=gene-AC00_RS16545;Name=dosC;gbkey=Gene;gene=dosC;gene_biotype=protein_coding;locus_tag=AC00_RS16545;old_locus_tag=AC00_1610 NZ_JJLU01000057.1 Protein Homology CDS 21400 22782 . - 0 ID=cds-WP_032280869.1;Parent=gene-AC00_RS16545;Dbxref=GenBank:WP_032280869.1;Name=WP_032280869.1;gbkey=CDS;gene=dosC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310122.1;locus_tag=AC00_RS16545;product=diguanylate cyclase DosC;protein_id=WP_032280869.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 23159 24478 . - . ID=gene-AC00_RS16540;Name=AC00_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16540;old_locus_tag=AC00_1611 NZ_JJLU01000057.1 Protein Homology CDS 23159 24478 . - 0 ID=cds-WP_000350379.1;Parent=gene-AC00_RS16540;Dbxref=GenBank:WP_000350379.1;Name=WP_000350379.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310123.1;locus_tag=AC00_RS16540;product=family 10 glycosylhydrolase;protein_id=WP_000350379.1;transl_table=11 NZ_JJLU01000057.1 RefSeq gene 24609 26144 . - . ID=gene-AC00_RS16535;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AC00_RS16535;old_locus_tag=AC00_1612 NZ_JJLU01000057.1 Protein Homology CDS 24609 26144 . - 0 ID=cds-WP_000246019.1;Parent=gene-AC00_RS16535;Dbxref=GenBank:WP_000246019.1;Name=WP_000246019.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416009.1;locus_tag=AC00_RS16535;product=acid resistance gamma-aminobutyrate antiporter GadC;protein_id=WP_000246019.1;transl_table=11 NZ_JJLU01000057.1 RefSeq pseudogene 26300 26640 . - . ID=gene-AC00_RS16530;Name=AC00_RS16530;end_range=26640,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16530;old_locus_tag=AC00_1613;partial=true;pseudo=true NZ_JJLU01000057.1 Protein Homology CDS 26300 26640 . - 2 ID=cds-AC00_RS16530;Parent=gene-AC00_RS16530;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312424.1;locus_tag=AC00_RS16530;partial=true;product=glutamate decarboxylase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000058.1 1 16654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000058.1 RefSeq region 1 16654 . + . ID=NZ_JJLU01000058.1:1..16654;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000058.1 RefSeq gene 1 727 . - . ID=gene-AC00_RS16525;Name=AC00_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16525;old_locus_tag=AC00_1614;partial=true;start_range=.,1 NZ_JJLU01000058.1 Protein Homology CDS 1 727 . - 0 ID=cds-WP_032288199.1;Parent=gene-AC00_RS16525;Dbxref=GenBank:WP_032288199.1;Name=WP_032288199.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC00_RS16525;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_032288199.1;start_range=.,1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 1089 3872 . - . ID=gene-AC00_RS16520;Name=AC00_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16520;old_locus_tag=AC00_1615 NZ_JJLU01000058.1 Protein Homology CDS 1089 3872 . - 0 ID=cds-WP_032281789.1;Parent=gene-AC00_RS16520;Dbxref=GenBank:WP_032281789.1;Name=WP_032281789.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310126.2;locus_tag=AC00_RS16520;product=M16 family metallopeptidase;protein_id=WP_032281789.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 3929 6301 . - . ID=gene-AC00_RS16515;Name=AC00_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16515;old_locus_tag=AC00_1616 NZ_JJLU01000058.1 Protein Homology CDS 3929 6301 . - 0 ID=cds-WP_032288200.1;Parent=gene-AC00_RS16515;Dbxref=GenBank:WP_032288200.1;Name=WP_032288200.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310127.1;locus_tag=AC00_RS16515;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_032288200.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 6339 8024 . - . ID=gene-AC00_RS16510;Name=AC00_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16510;old_locus_tag=AC00_1617 NZ_JJLU01000058.1 Protein Homology CDS 6339 8024 . - 0 ID=cds-WP_032281792.1;Parent=gene-AC00_RS16510;Dbxref=GenBank:WP_032281792.1;Name=WP_032281792.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416013.1;locus_tag=AC00_RS16510;product=ABC transporter ATP-binding protein/permease;protein_id=WP_032281792.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 8226 8348 . + . ID=gene-AC00_RS30275;Name=AC00_RS30275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30275 NZ_JJLU01000058.1 Protein Homology CDS 8226 8348 . + 0 ID=cds-WP_122986402.1;Parent=gene-AC00_RS30275;Dbxref=GenBank:WP_122986402.1;Name=WP_122986402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518784.1;locus_tag=AC00_RS30275;product=hypothetical protein;protein_id=WP_122986402.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 8314 9471 . - . ID=gene-AC00_RS16505;Name=AC00_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16505;old_locus_tag=AC00_1618 NZ_JJLU01000058.1 Protein Homology CDS 8314 9471 . - 0 ID=cds-WP_032281793.1;Parent=gene-AC00_RS16505;Dbxref=GenBank:WP_032281793.1;Name=WP_032281793.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416014.4;locus_tag=AC00_RS16505;product=anaerobic sulfatase maturase;protein_id=WP_032281793.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 9523 11205 . - . ID=gene-AC00_RS16500;Name=AC00_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16500;old_locus_tag=AC00_1619 NZ_JJLU01000058.1 Protein Homology CDS 9523 11205 . - 0 ID=cds-WP_001303114.1;Parent=gene-AC00_RS16500;Dbxref=GenBank:WP_001303114.1;Name=WP_001303114.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310130.2;locus_tag=AC00_RS16500;product=sulfatase-like hydrolase/transferase;protein_id=WP_001303114.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 11607 12368 . - . ID=gene-AC00_RS16495;Name=ydeO;gbkey=Gene;gene=ydeO;gene_biotype=protein_coding;locus_tag=AC00_RS16495;old_locus_tag=AC00_1620 NZ_JJLU01000058.1 Protein Homology CDS 11607 12368 . - 0 ID=cds-WP_000060474.1;Parent=gene-AC00_RS16495;Dbxref=GenBank:WP_000060474.1;Name=WP_000060474.1;gbkey=CDS;gene=ydeO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707419.1;locus_tag=AC00_RS16495;product=acid stress response transcriptional regulator YdeO;protein_id=WP_000060474.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 12443 12640 . - . ID=gene-AC00_RS0124515;Name=safA;gbkey=Gene;gene=safA;gene_biotype=protein_coding;locus_tag=AC00_RS0124515 NZ_JJLU01000058.1 Protein Homology CDS 12443 12640 . - 0 ID=cds-WP_032281797.1;Parent=gene-AC00_RS0124515;Dbxref=GenBank:WP_032281797.1;Name=WP_032281797.1;gbkey=CDS;gene=safA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310132.1;locus_tag=AC00_RS0124515;product=two-component system connector SafA;protein_id=WP_032281797.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 12888 15167 . - . ID=gene-AC00_RS16490;Name=ydeP;gbkey=Gene;gene=ydeP;gene_biotype=protein_coding;locus_tag=AC00_RS16490;old_locus_tag=AC00_1621 NZ_JJLU01000058.1 Protein Homology CDS 12888 15167 . - 0 ID=cds-WP_032281799.1;Parent=gene-AC00_RS16490;Dbxref=GenBank:WP_032281799.1;Name=WP_032281799.1;gbkey=CDS;gene=ydeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416018.1;locus_tag=AC00_RS16490;product=acid resistance putative oxidoreductase YdeP;protein_id=WP_032281799.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 15501 16364 . - . ID=gene-AC00_RS16485;Name=AC00_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16485;old_locus_tag=AC00_1622 NZ_JJLU01000058.1 Protein Homology CDS 15501 16364 . - 0 ID=cds-WP_032281800.1;Parent=gene-AC00_RS16485;Dbxref=GenBank:WP_032281800.1;Name=WP_032281800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001366367.1;locus_tag=AC00_RS16485;product=fimbrial protein;protein_id=WP_032281800.1;transl_table=11 NZ_JJLU01000058.1 RefSeq gene 16434 16654 . + . ID=gene-AC00_RS27515;Name=AC00_RS27515;end_range=16654,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27515;old_locus_tag=AC00_1623;partial=true NZ_JJLU01000058.1 Protein Homology CDS 16434 16654 . + 0 ID=cds-WP_000179206.1-3;Parent=gene-AC00_RS27515;Dbxref=GenBank:WP_000179206.1;Name=WP_000179206.1;Ontology_term=GO:0006313;end_range=16654,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27515;partial=true;product=IS1 family transposase;protein_id=WP_000179206.1;transl_table=11 ##sequence-region NZ_JJLU01000059.1 1 45563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000059.1 RefSeq region 1 45563 . + . ID=NZ_JJLU01000059.1:1..45563;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000059.1 RefSeq pseudogene 1 314 . + . ID=gene-AC00_RS16480;Name=AC00_RS16480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16480;old_locus_tag=AC00_1624;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000059.1 Protein Homology CDS 1 314 . + 2 ID=cds-AC00_RS16480;Parent=gene-AC00_RS16480;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS16480;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 435 938 . - . ID=gene-AC00_RS16475;Name=ydeR;gbkey=Gene;gene=ydeR;gene_biotype=protein_coding;locus_tag=AC00_RS16475;old_locus_tag=AC00_1625 NZ_JJLU01000059.1 Protein Homology CDS 435 938 . - 0 ID=cds-WP_032280873.1;Parent=gene-AC00_RS16475;Dbxref=GenBank:WP_032280873.1;Name=WP_032280873.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=ydeR;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310135.1;locus_tag=AC00_RS16475;product=fimbrial protein;protein_id=WP_032280873.1;transl_table=11 NZ_JJLU01000059.1 RefSeq pseudogene 951 1073 . - . ID=gene-AC00_RS27520;Name=AC00_RS27520;end_range=1073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27520;partial=true;pseudo=true NZ_JJLU01000059.1 Protein Homology CDS 951 1073 . - 0 ID=cds-AC00_RS27520;Parent=gene-AC00_RS27520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310136.1;locus_tag=AC00_RS27520;partial=true;product=type 1 fimbrial protein;pseudo=true;transl_table=11 NZ_JJLU01000059.1 RefSeq pseudogene 1077 2165 . - . ID=gene-AC00_RS16470;Name=AC00_RS16470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16470;old_locus_tag=AC00_1626;partial=true;pseudo=true;start_range=.,1077 NZ_JJLU01000059.1 Protein Homology CDS 1077 2165 . - 0 ID=cds-AC00_RS16470;Parent=gene-AC00_RS16470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310137.2;locus_tag=AC00_RS16470;partial=true;product=fimbria/pilus outer membrane usher protein;pseudo=true;start_range=.,1077;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 2207 2836 . - . ID=gene-AC00_RS0124520;Name=AC00_RS0124520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124520;old_locus_tag=AC00_1627 NZ_JJLU01000059.1 Protein Homology CDS 2207 2836 . - 0 ID=cds-WP_375156539.1;Parent=gene-AC00_RS0124520;Dbxref=GenBank:WP_375156539.1;Name=WP_375156539.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_042085615.1;locus_tag=AC00_RS0124520;product=fimbria/pilus periplasmic chaperone;protein_id=WP_375156539.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 3041 4363 . - . ID=gene-AC00_RS0124525;Name=hipA;gbkey=Gene;gene=hipA;gene_biotype=protein_coding;locus_tag=AC00_RS0124525;old_locus_tag=AC00_1628 NZ_JJLU01000059.1 Protein Homology CDS 3041 4363 . - 0 ID=cds-WP_021574605.1;Parent=gene-AC00_RS0124525;Dbxref=GenBank:WP_021574605.1;Name=WP_021574605.1;gbkey=CDS;gene=hipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416024.1;locus_tag=AC00_RS0124525;product=type II toxin-antitoxin system serine/threonine protein kinase toxin HipA;protein_id=WP_021574605.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 4363 4629 . - . ID=gene-AC00_RS16465;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=AC00_RS16465;old_locus_tag=AC00_1629 NZ_JJLU01000059.1 Protein Homology CDS 4363 4629 . - 0 ID=cds-WP_001296726.1;Parent=gene-AC00_RS16465;Dbxref=GenBank:WP_001296726.1;Name=WP_001296726.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416025.1;locus_tag=AC00_RS16465;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_001296726.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 4840 10260 . - . ID=gene-AC00_RS16460;Name=AC00_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16460;old_locus_tag=AC00_1630 NZ_JJLU01000059.1 Protein Homology CDS 4840 10260 . - 0 ID=cds-WP_032288201.1;Parent=gene-AC00_RS16460;Dbxref=GenBank:WP_032288201.1;Name=WP_032288201.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244610.1;locus_tag=AC00_RS16460;product=ECSE_1600 family autotransporter;protein_id=WP_032288201.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 10791 12383 . - . ID=gene-AC00_RS16455;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=AC00_RS16455;old_locus_tag=AC00_1631 NZ_JJLU01000059.1 Protein Homology CDS 10791 12383 . - 0 ID=cds-WP_032280876.1;Parent=gene-AC00_RS16455;Dbxref=GenBank:WP_032280876.1;Name=WP_032280876.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310145.3;locus_tag=AC00_RS16455;product=autoinducer-2 kinase;protein_id=WP_032280876.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 12462 13415 . - . ID=gene-AC00_RS16450;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=AC00_RS16450;old_locus_tag=AC00_1632 NZ_JJLU01000059.1 Protein Homology CDS 12462 13415 . - 0 ID=cds-WP_032280877.1;Parent=gene-AC00_RS16450;Dbxref=GenBank:WP_032280877.1;Name=WP_032280877.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310146.1;locus_tag=AC00_RS16450;product=transcriptional regulator LsrR;protein_id=WP_032280877.1;transl_table=11 NZ_JJLU01000059.1 RefSeq pseudogene 13664 15198 . + . ID=gene-AC00_RS0124530;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=pseudogene;locus_tag=AC00_RS0124530;pseudo=true NZ_JJLU01000059.1 Protein Homology CDS 13664 15198 . + 0 ID=cds-AC00_RS0124530;Parent=gene-AC00_RS0124530;Note=frameshifted;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310147.1;locus_tag=AC00_RS0124530;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;pseudo=true;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 15192 16220 . + . ID=gene-AC00_RS16445;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=AC00_RS16445;old_locus_tag=AC00_1635 NZ_JJLU01000059.1 Protein Homology CDS 15192 16220 . + 0 ID=cds-WP_032224016.1;Parent=gene-AC00_RS16445;Dbxref=GenBank:WP_032224016.1;Name=WP_032224016.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416031.1;locus_tag=AC00_RS16445;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_032224016.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 16220 17212 . + . ID=gene-AC00_RS16440;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=AC00_RS16440;old_locus_tag=AC00_1636 NZ_JJLU01000059.1 Protein Homology CDS 16220 17212 . + 0 ID=cds-WP_032280878.1;Parent=gene-AC00_RS16440;Dbxref=GenBank:WP_032280878.1;Name=WP_032280878.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416032.1;locus_tag=AC00_RS16440;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_032280878.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 17224 18246 . + . ID=gene-AC00_RS16435;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=AC00_RS16435;old_locus_tag=AC00_1637 NZ_JJLU01000059.1 Protein Homology CDS 17224 18246 . + 0 ID=cds-WP_032280879.1;Parent=gene-AC00_RS16435;Dbxref=GenBank:WP_032280879.1;Name=WP_032280879.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310150.1;locus_tag=AC00_RS16435;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_032280879.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 18273 19148 . + . ID=gene-AC00_RS16430;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=AC00_RS16430;old_locus_tag=AC00_1638 NZ_JJLU01000059.1 Protein Homology CDS 18273 19148 . + 0 ID=cds-WP_032280880.1;Parent=gene-AC00_RS16430;Dbxref=GenBank:WP_032280880.1;Name=WP_032280880.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416034.1;locus_tag=AC00_RS16430;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_032280880.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 19172 19462 . + . ID=gene-AC00_RS16425;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=AC00_RS16425;old_locus_tag=AC00_1639 NZ_JJLU01000059.1 Protein Homology CDS 19172 19462 . + 0 ID=cds-WP_000558527.1;Parent=gene-AC00_RS16425;Dbxref=GenBank:WP_000558527.1;Name=WP_000558527.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310152.1;locus_tag=AC00_RS16425;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_000558527.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 19519 20277 . + . ID=gene-AC00_RS16420;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=AC00_RS16420;old_locus_tag=AC00_1640 NZ_JJLU01000059.1 Protein Homology CDS 19519 20277 . + 0 ID=cds-WP_032280881.1;Parent=gene-AC00_RS16420;Dbxref=GenBank:WP_032280881.1;Name=WP_032280881.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707457.1;locus_tag=AC00_RS16420;product=trans-aconitate 2-methyltransferase;protein_id=WP_032280881.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 20281 21195 . - . ID=gene-AC00_RS16415;Name=yneE;gbkey=Gene;gene=yneE;gene_biotype=protein_coding;locus_tag=AC00_RS16415;old_locus_tag=AC00_1641 NZ_JJLU01000059.1 Protein Homology CDS 20281 21195 . - 0 ID=cds-WP_001313828.1;Parent=gene-AC00_RS16415;Dbxref=GenBank:WP_001313828.1;Name=WP_001313828.1;Ontology_term=GO:0005254;gbkey=CDS;gene=yneE;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=AC00_RS16415;product=bestrophin family protein;protein_id=WP_001313828.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 21392 22843 . - . ID=gene-AC00_RS16410;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=AC00_RS16410;old_locus_tag=AC00_1642 NZ_JJLU01000059.1 Protein Homology CDS 21392 22843 . - 0 ID=cds-WP_000854633.1;Parent=gene-AC00_RS16410;Dbxref=GenBank:WP_000854633.1;Name=WP_000854633.1;gbkey=CDS;gene=uxaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=AC00_RS16410;product=tagaturonate reductase;protein_id=WP_000854633.1;transl_table=11 NZ_JJLU01000059.1 RefSeq pseudogene 23070 24487 . - . ID=gene-AC00_RS16405;Name=AC00_RS16405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16405;old_locus_tag=AC00_1643;pseudo=true NZ_JJLU01000059.1 Protein Homology CDS 23070 24487 . - 0 ID=cds-AC00_RS16405;Parent=gene-AC00_RS16405;Note=frameshifted;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310156.2;locus_tag=AC00_RS16405;product=sensor domain-containing diguanylate cyclase;pseudo=true;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 24626 24985 . - . ID=gene-AC00_RS16395;Name=yneG;gbkey=Gene;gene=yneG;gene_biotype=protein_coding;locus_tag=AC00_RS16395;old_locus_tag=AC00_1645 NZ_JJLU01000059.1 Protein Homology CDS 24626 24985 . - 0 ID=cds-WP_001191026.1;Parent=gene-AC00_RS16395;Dbxref=GenBank:WP_001191026.1;Name=WP_001191026.1;gbkey=CDS;gene=yneG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191026.1;locus_tag=AC00_RS16395;product=DUF4186 domain-containing protein;protein_id=WP_001191026.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 24985 25911 . - . ID=gene-AC00_RS16390;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=AC00_RS16390;old_locus_tag=AC00_1646 NZ_JJLU01000059.1 Protein Homology CDS 24985 25911 . - 0 ID=cds-WP_000257409.1;Parent=gene-AC00_RS16390;Dbxref=GenBank:WP_000257409.1;Name=WP_000257409.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310158.1;locus_tag=AC00_RS16390;product=glutaminase B;protein_id=WP_000257409.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 25975 27363 . - . ID=gene-AC00_RS16385;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=AC00_RS16385;old_locus_tag=AC00_1647 NZ_JJLU01000059.1 Protein Homology CDS 25975 27363 . - 0 ID=cds-WP_032280882.1;Parent=gene-AC00_RS16385;Dbxref=GenBank:WP_032280882.1;Name=WP_032280882.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416042.2;locus_tag=AC00_RS16385;product=succinate-semialdehyde dehydrogenase;protein_id=WP_032280882.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 27464 28345 . + . ID=gene-AC00_RS16380;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=AC00_RS16380;old_locus_tag=AC00_1648 NZ_JJLU01000059.1 Protein Homology CDS 27464 28345 . + 0 ID=cds-WP_000366472.1;Parent=gene-AC00_RS16380;Dbxref=GenBank:WP_000366472.1;Name=WP_000366472.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310160.1;locus_tag=AC00_RS16380;product=putrescine utilization regulator PtrR;protein_id=WP_000366472.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 28423 29538 . + . ID=gene-AC00_RS16375;Name=yneK;gbkey=Gene;gene=yneK;gene_biotype=protein_coding;locus_tag=AC00_RS16375;old_locus_tag=AC00_1649 NZ_JJLU01000059.1 Protein Homology CDS 28423 29538 . + 0 ID=cds-WP_032280883.1;Parent=gene-AC00_RS16375;Dbxref=GenBank:WP_032280883.1;Name=WP_032280883.1;gbkey=CDS;gene=yneK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416044.1;locus_tag=AC00_RS16375;product=putative protein YneK;protein_id=WP_032280883.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 29689 30879 . + . ID=gene-AC00_RS16370;Name=ydeA;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=AC00_RS16370;old_locus_tag=AC00_1650 NZ_JJLU01000059.1 Protein Homology CDS 29689 30879 . + 0 ID=cds-WP_032280884.1;Parent=gene-AC00_RS16370;Dbxref=GenBank:WP_032280884.1;Name=WP_032280884.1;gbkey=CDS;gene=ydeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416045.1;locus_tag=AC00_RS16370;product=L-arabinose MFS transporter;protein_id=WP_032280884.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 30904 31569 . - . ID=gene-AC00_RS16365;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=AC00_RS16365;old_locus_tag=AC00_1651 NZ_JJLU01000059.1 Protein Homology CDS 30904 31569 . - 0 ID=cds-WP_000885033.1;Parent=gene-AC00_RS16365;Dbxref=GenBank:WP_000885033.1;Name=WP_000885033.1;gbkey=CDS;gene=marC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416046.1;locus_tag=AC00_RS16365;product=NAAT family transporter MarC;protein_id=WP_000885033.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 31781 32215 . + . ID=gene-AC00_RS16360;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=AC00_RS16360;old_locus_tag=AC00_1652 NZ_JJLU01000059.1 Protein Homology CDS 31781 32215 . + 0 ID=cds-WP_000843419.1;Parent=gene-AC00_RS16360;Dbxref=GenBank:WP_000843419.1;Name=WP_000843419.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310164.2;locus_tag=AC00_RS16360;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_000843419.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 32236 32619 . + . ID=gene-AC00_RS16355;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=AC00_RS16355;old_locus_tag=AC00_1653 NZ_JJLU01000059.1 Protein Homology CDS 32236 32619 . + 0 ID=cds-WP_000091199.1;Parent=gene-AC00_RS16355;Dbxref=GenBank:WP_000091199.1;Name=WP_000091199.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707445.2;locus_tag=AC00_RS16355;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_000091199.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 32651 32869 . + . ID=gene-AC00_RS16350;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=AC00_RS16350;old_locus_tag=AC00_1654 NZ_JJLU01000059.1 Protein Homology CDS 32651 32869 . + 0 ID=cds-WP_032280885.1;Parent=gene-AC00_RS16350;Dbxref=GenBank:WP_032280885.1;Name=WP_032280885.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310166.1;locus_tag=AC00_RS16350;product=multiple antibiotic resistance protein MarB;protein_id=WP_032280885.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 32900 33799 . - . ID=gene-AC00_RS16345;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=AC00_RS16345;old_locus_tag=AC00_1655 NZ_JJLU01000059.1 Protein Homology CDS 32900 33799 . - 0 ID=cds-WP_000087208.1;Parent=gene-AC00_RS16345;Dbxref=GenBank:WP_000087208.1;Name=WP_000087208.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310167.1;locus_tag=AC00_RS16345;product=O-acetylserine/cysteine exporter;protein_id=WP_000087208.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 33994 35205 . + . ID=gene-AC00_RS16340;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=AC00_RS16340;old_locus_tag=AC00_1656 NZ_JJLU01000059.1 Protein Homology CDS 33994 35205 . + 0 ID=cds-WP_032280886.1;Parent=gene-AC00_RS16340;Dbxref=GenBank:WP_032280886.1;Name=WP_032280886.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416051.1;locus_tag=AC00_RS16340;product=efflux MFS transporter YdeE;protein_id=WP_032280886.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 35332 35427 . + . ID=gene-AC00_RS0124540;Name=mgtS;gbkey=Gene;gene=mgtS;gene_biotype=protein_coding;locus_tag=AC00_RS0124540 NZ_JJLU01000059.1 Protein Homology CDS 35332 35427 . + 0 ID=cds-WP_000901367.1;Parent=gene-AC00_RS0124540;Dbxref=GenBank:WP_000901367.1;Name=WP_000901367.1;gbkey=CDS;gene=mgtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165319.1;locus_tag=AC00_RS0124540;product=protein MgtS;protein_id=WP_000901367.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 35427 35531 . + . ID=gene-AC00_RS31195;Name=mgtT;gbkey=Gene;gene=mgtT;gene_biotype=protein_coding;locus_tag=AC00_RS31195 NZ_JJLU01000059.1 Protein Homology CDS 35427 35531 . + 0 ID=cds-WP_211180496.1;Parent=gene-AC00_RS31195;Dbxref=GenBank:WP_211180496.1;Name=WP_211180496.1;gbkey=CDS;gene=mgtT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051185.1;locus_tag=AC00_RS31195;product=protein MgtT;protein_id=WP_211180496.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 35646 36536 . - . ID=gene-AC00_RS16335;Name=dgcZ;gbkey=Gene;gene=dgcZ;gene_biotype=protein_coding;locus_tag=AC00_RS16335;old_locus_tag=AC00_1657 NZ_JJLU01000059.1 Protein Homology CDS 35646 36536 . - 0 ID=cds-WP_032280887.1;Parent=gene-AC00_RS16335;Dbxref=GenBank:WP_032280887.1;Name=WP_032280887.1;gbkey=CDS;gene=dgcZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416052.1;locus_tag=AC00_RS16335;product=diguanylate cyclase DgcZ;protein_id=WP_032280887.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 36791 37183 . - . ID=gene-AC00_RS16330;Name=ydeI;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=AC00_RS16330;old_locus_tag=AC00_1658 NZ_JJLU01000059.1 Protein Homology CDS 36791 37183 . - 0 ID=cds-WP_000671733.1;Parent=gene-AC00_RS16330;Dbxref=GenBank:WP_000671733.1;Name=WP_000671733.1;gbkey=CDS;gene=ydeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416054.1;locus_tag=AC00_RS16330;product=YdeI family stress tolerance OB fold protein;protein_id=WP_000671733.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 37459 37977 . + . ID=gene-AC00_RS16325;Name=ydeJ;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=AC00_RS16325;old_locus_tag=AC00_1659 NZ_JJLU01000059.1 Protein Homology CDS 37459 37977 . + 0 ID=cds-WP_001625264.1;Parent=gene-AC00_RS16325;Dbxref=GenBank:WP_001625264.1;Name=WP_001625264.1;gbkey=CDS;gene=ydeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707440.1;locus_tag=AC00_RS16325;product=2-oxo-tetronate isomerase;protein_id=WP_001625264.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 38022 40067 . - . ID=gene-AC00_RS16320;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=AC00_RS16320;old_locus_tag=AC00_1660 NZ_JJLU01000059.1 Protein Homology CDS 38022 40067 . - 0 ID=cds-WP_032280888.1;Parent=gene-AC00_RS16320;Dbxref=GenBank:WP_032280888.1;Name=WP_032280888.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310174.1;locus_tag=AC00_RS16320;product=peptidyl-dipeptidase Dcp;protein_id=WP_032280888.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 40204 40950 . + . ID=gene-AC00_RS16315;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=AC00_RS16315;old_locus_tag=AC00_1661 NZ_JJLU01000059.1 Protein Homology CDS 40204 40950 . + 0 ID=cds-WP_001296081.1;Parent=gene-AC00_RS16315;Dbxref=GenBank:WP_001296081.1;Name=WP_001296081.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310175.1;locus_tag=AC00_RS16315;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_001296081.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 41039 41725 . + . ID=gene-AC00_RS16310;Name=rspR;gbkey=Gene;gene=rspR;gene_biotype=protein_coding;gene_synonym=ydfH;locus_tag=AC00_RS16310;old_locus_tag=AC00_1662 NZ_JJLU01000059.1 Protein Homology CDS 41039 41725 . + 0 ID=cds-WP_000215549.1;Parent=gene-AC00_RS16310;Dbxref=GenBank:WP_000215549.1;Name=WP_000215549.1;gbkey=CDS;gene=rspR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310176.1;locus_tag=AC00_RS16310;product=DNA-binding transcriptional regulator rspR;protein_id=WP_000215549.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 41902 42105 . + . ID=gene-AC00_RS16305;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=AC00_RS16305;old_locus_tag=AC00_1663 NZ_JJLU01000059.1 Protein Homology CDS 41902 42105 . + 0 ID=cds-WP_000214712.1;Parent=gene-AC00_RS16305;Dbxref=GenBank:WP_000214712.1;Name=WP_000214712.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310177.1;locus_tag=AC00_RS16305;product=putative selenium delivery protein YdfZ;protein_id=WP_000214712.1;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 42141 43601 . - . ID=gene-AC00_RS16300;Name=ydfI;gbkey=Gene;gene=ydfI;gene_biotype=protein_coding;locus_tag=AC00_RS16300;old_locus_tag=AC00_1664 NZ_JJLU01000059.1 Protein Homology CDS 42141 43601 . - 0 ID=cds-WP_032280890.1;Parent=gene-AC00_RS16300;Dbxref=GenBank:WP_032280890.1;Name=WP_032280890.1;Ontology_term=GO:0016616;gbkey=CDS;gene=ydfI;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310178.1;locus_tag=AC00_RS16300;product=mannitol dehydrogenase family protein;protein_id=WP_032280890.1;transl_table=11 NZ_JJLU01000059.1 RefSeq pseudogene 43690 44799 . - . ID=gene-AC00_RS16295;Name=ydfJ;end_range=44799,.;gbkey=Gene;gene=ydfJ;gene_biotype=pseudogene;locus_tag=AC00_RS16295;old_locus_tag=AC00_1665;partial=true;pseudo=true NZ_JJLU01000059.1 Protein Homology CDS 43690 44799 . - 0 ID=cds-AC00_RS16295;Parent=gene-AC00_RS16295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=44799,.;gbkey=CDS;gene=ydfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000582800.1;locus_tag=AC00_RS16295;partial=true;product=MHS family MFS transporter YdfJ;pseudo=true;transl_table=11 NZ_JJLU01000059.1 RefSeq gene 44856 45553 . + . ID=gene-AC00_RS16290;Name=AC00_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16290;old_locus_tag=AC00_1666 NZ_JJLU01000059.1 Protein Homology CDS 44856 45105 . + 0 ID=cds-WP_223400810.1;Parent=gene-AC00_RS16290;Dbxref=GenBank:WP_223400810.1;Name=WP_223400810.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS16290;product=IS1-like element IS1X2 family transposase;protein_id=WP_223400810.1;transl_table=11 NZ_JJLU01000059.1 Protein Homology CDS 45105 45553 . + 2 ID=cds-WP_223400810.1;Parent=gene-AC00_RS16290;Dbxref=GenBank:WP_223400810.1;Name=WP_223400810.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS16290;product=IS1-like element IS1X2 family transposase;protein_id=WP_223400810.1;transl_table=11 ##sequence-region NZ_JJLU01000060.1 1 46256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000060.1 RefSeq region 1 46256 . + . ID=NZ_JJLU01000060.1:1..46256;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000060.1 RefSeq pseudogene 1 136 . - . ID=gene-AC00_RS30895;Name=AC00_RS30895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30895;old_locus_tag=AC00_1667;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000060.1 Protein Homology CDS 1 136 . - 0 ID=cds-AC00_RS30895;Parent=gene-AC00_RS30895;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AC00_RS30895;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 136 3264 . - . ID=gene-AC00_RS27545;Name=AC00_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27545 NZ_JJLU01000060.1 Protein Homology CDS 136 3264 . - 0 ID=cds-WP_032288203.1;Parent=gene-AC00_RS27545;Dbxref=GenBank:WP_032288203.1;Name=WP_032288203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362562.1;locus_tag=AC00_RS27545;product=prophage tail fiber N-terminal domain-containing protein;protein_id=WP_032288203.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 3416 4015 . - . ID=gene-AC00_RS16285;Name=AC00_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16285;old_locus_tag=AC00_1671 NZ_JJLU01000060.1 Protein Homology CDS 3416 4015 . - 0 ID=cds-WP_032234602.1;Parent=gene-AC00_RS16285;Dbxref=GenBank:WP_032234602.1;Name=WP_032234602.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706647.1;locus_tag=AC00_RS16285;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_032234602.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 4083 7556 . - . ID=gene-AC00_RS16280;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=AC00_RS16280;old_locus_tag=AC00_1672 NZ_JJLU01000060.1 Protein Homology CDS 4083 7556 . - 0 ID=cds-WP_032280896.1;Parent=gene-AC00_RS16280;Dbxref=GenBank:WP_032280896.1;Name=WP_032280896.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309833.1;locus_tag=AC00_RS16280;product=phage attachment tail tip protein J;protein_id=WP_032280896.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 7899 8480 . - . ID=gene-AC00_RS16275;Name=AC00_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16275;old_locus_tag=AC00_1673 NZ_JJLU01000060.1 Protein Homology CDS 7899 8480 . - 0 ID=cds-WP_001089998.1;Parent=gene-AC00_RS16275;Dbxref=GenBank:WP_001089998.1;Name=WP_001089998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310263.2;locus_tag=AC00_RS16275;product=tail assembly protein;protein_id=WP_001089998.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 8477 9220 . - . ID=gene-AC00_RS16270;Name=AC00_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16270;old_locus_tag=AC00_1674 NZ_JJLU01000060.1 Protein Homology CDS 8477 9220 . - 0 ID=cds-WP_000194723.1;Parent=gene-AC00_RS16270;Dbxref=GenBank:WP_000194723.1;Name=WP_000194723.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310264.2;locus_tag=AC00_RS16270;product=C40 family peptidase;protein_id=WP_000194723.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 9231 9929 . - . ID=gene-AC00_RS16265;Name=AC00_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16265;old_locus_tag=AC00_1675 NZ_JJLU01000060.1 Protein Homology CDS 9231 9929 . - 0 ID=cds-WP_001335877.1;Parent=gene-AC00_RS16265;Dbxref=GenBank:WP_001335877.1;Name=WP_001335877.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310191.1;locus_tag=AC00_RS16265;product=phage minor tail protein L;protein_id=WP_001335877.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 9929 10270 . - . ID=gene-AC00_RS16260;Name=AC00_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16260;old_locus_tag=AC00_1676 NZ_JJLU01000060.1 Protein Homology CDS 9929 10270 . - 0 ID=cds-WP_000807940.1;Parent=gene-AC00_RS16260;Dbxref=GenBank:WP_000807940.1;Name=WP_000807940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309831.1;locus_tag=AC00_RS16260;product=phage tail protein;protein_id=WP_000807940.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 10263 13505 . - . ID=gene-AC00_RS16255;Name=AC00_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16255;old_locus_tag=AC00_1677 NZ_JJLU01000060.1 Protein Homology CDS 10263 13505 . - 0 ID=cds-WP_032280897.1;Parent=gene-AC00_RS16255;Dbxref=GenBank:WP_032280897.1;Name=WP_032280897.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_304285.1;locus_tag=AC00_RS16255;product=phage tail tape measure protein;protein_id=WP_032280897.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 13553 13834 . - . ID=gene-AC00_RS0124550;Name=AC00_RS0124550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124550;old_locus_tag=AC00_1678 NZ_JJLU01000060.1 Protein Homology CDS 13553 13834 . - 0 ID=cds-WP_001234278.1;Parent=gene-AC00_RS0124550;Dbxref=GenBank:WP_001234278.1;Name=WP_001234278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234272.1;locus_tag=AC00_RS0124550;product=phage tail assembly protein T;protein_id=WP_001234278.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 13858 14232 . - . ID=gene-AC00_RS16250;Name=AC00_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16250;old_locus_tag=AC00_1679 NZ_JJLU01000060.1 Protein Homology CDS 13858 14232 . - 0 ID=cds-WP_000710949.1;Parent=gene-AC00_RS16250;Dbxref=GenBank:WP_000710949.1;Name=WP_000710949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310269.1;locus_tag=AC00_RS16250;product=phage tail assembly chaperone;protein_id=WP_000710949.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 14247 14963 . - . ID=gene-AC00_RS16245;Name=AC00_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16245;old_locus_tag=AC00_1680 NZ_JJLU01000060.1 Protein Homology CDS 14247 14963 . - 0 ID=cds-WP_001275441.1;Parent=gene-AC00_RS16245;Dbxref=GenBank:WP_001275441.1;Name=WP_001275441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310270.1;locus_tag=AC00_RS16245;product=major tail subunit;protein_id=WP_001275441.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 15028 15372 . - . ID=gene-AC00_RS16240;Name=gp17;gbkey=Gene;gene=gp17;gene_biotype=protein_coding;locus_tag=AC00_RS16240;old_locus_tag=AC00_1681 NZ_JJLU01000060.1 Protein Homology CDS 15028 15372 . - 0 ID=cds-WP_032209079.1;Parent=gene-AC00_RS16240;Dbxref=GenBank:WP_032209079.1;Name=WP_032209079.1;gbkey=CDS;gene=gp17;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309575.1;locus_tag=AC00_RS16240;product=tail completion protein gp17;protein_id=WP_032209079.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 15369 15815 . - . ID=gene-AC00_RS16235;Name=AC00_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16235;old_locus_tag=AC00_1682 NZ_JJLU01000060.1 Protein Homology CDS 15369 15815 . - 0 ID=cds-WP_000573362.1;Parent=gene-AC00_RS16235;Dbxref=GenBank:WP_000573362.1;Name=WP_000573362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309825.1;locus_tag=AC00_RS16235;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_000573362.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 15812 16162 . - . ID=gene-AC00_RS16230;Name=AC00_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16230;old_locus_tag=AC00_1683 NZ_JJLU01000060.1 Protein Homology CDS 15812 16162 . - 0 ID=cds-WP_001007905.1;Parent=gene-AC00_RS16230;Dbxref=GenBank:WP_001007905.1;Name=WP_001007905.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309824.1;locus_tag=AC00_RS16230;product=phage head closure protein;protein_id=WP_001007905.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 16172 16498 . - . ID=gene-AC00_RS16225;Name=AC00_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16225;old_locus_tag=AC00_1684 NZ_JJLU01000060.1 Protein Homology CDS 16172 16498 . - 0 ID=cds-WP_000125990.1;Parent=gene-AC00_RS16225;Dbxref=GenBank:WP_000125990.1;Name=WP_000125990.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309823.1;locus_tag=AC00_RS16225;product=head-tail connector protein;protein_id=WP_000125990.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 16495 19080 . - . ID=gene-AC00_RS0124555;Name=AC00_RS0124555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124555 NZ_JJLU01000060.1 Protein Homology CDS 16495 19080 . - 0 ID=cds-WP_000267294.1;Parent=gene-AC00_RS0124555;Dbxref=GenBank:WP_000267294.1;Name=WP_000267294.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001365916.1;locus_tag=AC00_RS0124555;product=phage portal protein;protein_id=WP_000267294.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 19026 19247 . - . ID=gene-AC00_RS0124560;Name=AC00_RS0124560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124560;old_locus_tag=AC00_1686 NZ_JJLU01000060.1 Protein Homology CDS 19026 19247 . - 0 ID=cds-WP_001063099.1;Parent=gene-AC00_RS0124560;Dbxref=GenBank:WP_001063099.1;Name=WP_001063099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502610.1;locus_tag=AC00_RS0124560;product=hypothetical protein;protein_id=WP_001063099.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 19292 21229 . - . ID=gene-AC00_RS16220;Name=AC00_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16220;old_locus_tag=AC00_1687 NZ_JJLU01000060.1 Protein Homology CDS 19292 21229 . - 0 ID=cds-WP_000173031.1;Parent=gene-AC00_RS16220;Dbxref=GenBank:WP_000173031.1;Name=WP_000173031.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309570.1;locus_tag=AC00_RS16220;product=phage major capsid protein;protein_id=WP_000173031.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 21293 22954 . - . ID=gene-AC00_RS16215;Name=AC00_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16215;old_locus_tag=AC00_1688 NZ_JJLU01000060.1 Protein Homology CDS 21293 22954 . - 0 ID=cds-WP_032288204.1;Parent=gene-AC00_RS16215;Dbxref=GenBank:WP_032288204.1;Name=WP_032288204.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309569.1;locus_tag=AC00_RS16215;product=terminase large subunit;protein_id=WP_032288204.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 22951 23514 . - . ID=gene-AC00_RS16210;Name=AC00_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16210;old_locus_tag=AC00_1689 NZ_JJLU01000060.1 Protein Homology CDS 22951 23514 . - 0 ID=cds-WP_000958366.1;Parent=gene-AC00_RS16210;Dbxref=GenBank:WP_000958366.1;Name=WP_000958366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309568.1;locus_tag=AC00_RS16210;product=terminase small subunit;protein_id=WP_000958366.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 23804 24169 . - . ID=gene-AC00_RS16205;Name=AC00_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16205;old_locus_tag=AC00_1690 NZ_JJLU01000060.1 Protein Homology CDS 23804 24169 . - 0 ID=cds-WP_032280900.1;Parent=gene-AC00_RS16205;Dbxref=GenBank:WP_032280900.1;Name=WP_032280900.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309567.1;locus_tag=AC00_RS16205;product=HNH endonuclease;protein_id=WP_032280900.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 24211 24411 . + . ID=gene-AC00_RS16200;Name=AC00_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16200;old_locus_tag=AC00_1691 NZ_JJLU01000060.1 Protein Homology CDS 24211 24411 . + 0 ID=cds-WP_000095744.1;Parent=gene-AC00_RS16200;Dbxref=GenBank:WP_000095744.1;Name=WP_000095744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000095744.1;locus_tag=AC00_RS16200;product=YlcI/YnfO family protein;protein_id=WP_000095744.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 24543 24869 . - . ID=gene-AC00_RS16195;Name=AC00_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16195;old_locus_tag=AC00_1692 NZ_JJLU01000060.1 Protein Homology CDS 24543 24869 . - 0 ID=cds-WP_000828071.1;Parent=gene-AC00_RS16195;Dbxref=GenBank:WP_000828071.1;Name=WP_000828071.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828071.1;locus_tag=AC00_RS16195;product=TonB family protein;protein_id=WP_000828071.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 25208 25675 . - . ID=gene-AC00_RS31710;Name=AC00_RS31710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31710;old_locus_tag=AC00_1693 NZ_JJLU01000060.1 Protein Homology CDS 25208 25675 . - 0 ID=cds-WP_032280904.1;Parent=gene-AC00_RS31710;Dbxref=GenBank:WP_032280904.1;Name=WP_032280904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309813.1;locus_tag=AC00_RS31710;product=lysis protein;protein_id=WP_032280904.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 25677 25763 . - . ID=gene-AC00_RS0124575;Name=AC00_RS0124575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124575 NZ_JJLU01000060.1 Protein Homology CDS 25677 25763 . - 0 ID=cds-WP_032140280.1;Parent=gene-AC00_RS0124575;Dbxref=GenBank:WP_032140280.1;Name=WP_032140280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309121.1;locus_tag=AC00_RS0124575;product=hypothetical protein;protein_id=WP_032140280.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 25775 25930 . - . ID=gene-AC00_RS31200;Name=AC00_RS31200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31200;old_locus_tag=AC00_1694 NZ_JJLU01000060.1 Protein Homology CDS 25775 25930 . - 0 ID=cds-WP_042004856.1;Parent=gene-AC00_RS31200;Dbxref=GenBank:WP_042004856.1;Name=WP_042004856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000788411.1;locus_tag=AC00_RS31200;product=hypothetical protein;protein_id=WP_042004856.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 25894 26025 . - . ID=gene-AC00_RS31535;Name=AC00_RS31535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31535;old_locus_tag=AC00_1695 NZ_JJLU01000060.1 Protein Homology CDS 25894 26025 . - 0 ID=cds-WP_001280935.1;Parent=gene-AC00_RS31535;Dbxref=GenBank:WP_001280935.1;Name=WP_001280935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280968.1;locus_tag=AC00_RS31535;product=hypothetical protein;protein_id=WP_001280935.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 26318 26851 . - . ID=gene-AC00_RS16175;Name=rrrQ;gbkey=Gene;gene=rrrQ;gene_biotype=protein_coding;locus_tag=AC00_RS16175;old_locus_tag=AC00_1696 NZ_JJLU01000060.1 Protein Homology CDS 26318 26851 . - 0 ID=cds-WP_000992076.1;Parent=gene-AC00_RS16175;Dbxref=GenBank:WP_000992076.1;Name=WP_000992076.1;gbkey=CDS;gene=rrrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309559.1;locus_tag=AC00_RS16175;product=lysozyme;protein_id=WP_000992076.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 26957 27229 . + . ID=gene-AC00_RS27560;Name=AC00_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27560;old_locus_tag=AC00_1697 NZ_JJLU01000060.1 Protein Homology CDS 26957 27229 . + 0 ID=cds-WP_000369850.1;Parent=gene-AC00_RS27560;Dbxref=GenBank:WP_000369850.1;Name=WP_000369850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369850.1;locus_tag=AC00_RS27560;product=hypothetical protein;protein_id=WP_000369850.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 27195 27539 . - . ID=gene-AC00_RS16170;Name=AC00_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16170;old_locus_tag=AC00_1698 NZ_JJLU01000060.1 Protein Homology CDS 27195 27539 . - 0 ID=cds-WP_000193278.1;Parent=gene-AC00_RS16170;Dbxref=GenBank:WP_000193278.1;Name=WP_000193278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235607.1;locus_tag=AC00_RS16170;product=YdfR family protein;protein_id=WP_000193278.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 27544 27759 . - . ID=gene-AC00_RS16165;Name=AC00_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16165;old_locus_tag=AC00_1699 NZ_JJLU01000060.1 Protein Homology CDS 27544 27759 . - 0 ID=cds-WP_000284510.1;Parent=gene-AC00_RS16165;Dbxref=GenBank:WP_000284510.1;Name=WP_000284510.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309239.1;locus_tag=AC00_RS16165;product=class II holin family protein;protein_id=WP_000284510.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 27910 29790 . - . ID=gene-AC00_RS16160;Name=AC00_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16160;old_locus_tag=AC00_1700 NZ_JJLU01000060.1 Protein Homology CDS 27910 29790 . - 0 ID=cds-WP_032288205.1;Parent=gene-AC00_RS16160;Dbxref=GenBank:WP_032288205.1;Name=WP_032288205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309988.1;locus_tag=AC00_RS16160;product=DUF6645 domain-containing protein;protein_id=WP_032288205.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 29787 30047 . - . ID=gene-AC00_RS31715;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC00_RS31715;old_locus_tag=AC00_1701 NZ_JJLU01000060.1 Protein Homology CDS 29787 30047 . - 0 ID=cds-WP_419180689.1;Parent=gene-AC00_RS31715;Dbxref=GenBank:WP_419180689.1;Name=WP_419180689.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=AC00_RS31715;product=Rz1-like lysis system protein LysC;protein_id=WP_419180689.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 29929 30336 . - . ID=gene-AC00_RS16155;Name=AC00_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16155;old_locus_tag=AC00_1702 NZ_JJLU01000060.1 Protein Homology CDS 29929 30336 . - 0 ID=cds-WP_000780555.1;Parent=gene-AC00_RS16155;Dbxref=GenBank:WP_000780555.1;Name=WP_000780555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000780564.1;locus_tag=AC00_RS16155;product=DUF2570 domain-containing protein;protein_id=WP_000780555.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 30333 30725 . - . ID=gene-AC00_RS16150;Name=AC00_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16150;old_locus_tag=AC00_1703 NZ_JJLU01000060.1 Protein Homology CDS 30333 30725 . - 0 ID=cds-WP_000072343.1;Parent=gene-AC00_RS16150;Dbxref=GenBank:WP_000072343.1;Name=WP_000072343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072320.1;locus_tag=AC00_RS16150;product=M15 family metallopeptidase;protein_id=WP_000072343.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 30722 31045 . - . ID=gene-AC00_RS16145;Name=AC00_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16145;old_locus_tag=AC00_1704 NZ_JJLU01000060.1 Protein Homology CDS 30722 31045 . - 0 ID=cds-WP_001342221.1;Parent=gene-AC00_RS16145;Dbxref=GenBank:WP_001342221.1;Name=WP_001342221.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104349.1;locus_tag=AC00_RS16145;product=phage holin family protein;protein_id=WP_001342221.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 31048 31248 . - . ID=gene-AC00_RS16140;Name=AC00_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16140;old_locus_tag=AC00_1705 NZ_JJLU01000060.1 Protein Homology CDS 31048 31248 . - 0 ID=cds-WP_000864911.1;Parent=gene-AC00_RS16140;Dbxref=GenBank:WP_000864911.1;Name=WP_000864911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864894.1;locus_tag=AC00_RS16140;product=tail protein X;protein_id=WP_000864911.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 31248 31742 . - . ID=gene-AC00_RS16135;Name=AC00_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16135;old_locus_tag=AC00_1706 NZ_JJLU01000060.1 Protein Homology CDS 31248 31742 . - 0 ID=cds-WP_000063100.1;Parent=gene-AC00_RS16135;Dbxref=GenBank:WP_000063100.1;Name=WP_000063100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063104.1;locus_tag=AC00_RS16135;product=head completion/stabilization protein;protein_id=WP_000063100.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 31844 32644 . - . ID=gene-AC00_RS16130;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=AC00_RS16130;old_locus_tag=AC00_1707 NZ_JJLU01000060.1 Protein Homology CDS 31844 32644 . - 0 ID=cds-WP_000632311.1;Parent=gene-AC00_RS16130;Dbxref=GenBank:WP_000632311.1;Name=WP_000632311.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000632360.1;locus_tag=AC00_RS16130;product=phage terminase small subunit;protein_id=WP_000632311.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 32690 33742 . - . ID=gene-AC00_RS16125;Name=AC00_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16125;old_locus_tag=AC00_1708 NZ_JJLU01000060.1 Protein Homology CDS 32690 33742 . - 0 ID=cds-WP_024219921.1;Parent=gene-AC00_RS16125;Dbxref=GenBank:WP_024219921.1;Name=WP_024219921.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020218748.1;locus_tag=AC00_RS16125;product=phage major capsid protein%2C P2 family;protein_id=WP_024219921.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 33766 34602 . - . ID=gene-AC00_RS16120;Name=AC00_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16120;old_locus_tag=AC00_1709 NZ_JJLU01000060.1 Protein Homology CDS 33766 34602 . - 0 ID=cds-WP_001262655.1;Parent=gene-AC00_RS16120;Dbxref=GenBank:WP_001262655.1;Name=WP_001262655.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001262634.1;locus_tag=AC00_RS16120;product=GPO family capsid scaffolding protein;protein_id=WP_001262655.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 34757 36508 . + . ID=gene-AC00_RS16115;Name=AC00_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16115;old_locus_tag=AC00_1710 NZ_JJLU01000060.1 Protein Homology CDS 34757 36508 . + 0 ID=cds-WP_032280322.1;Parent=gene-AC00_RS16115;Dbxref=GenBank:WP_032280322.1;Name=WP_032280322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737206.1;locus_tag=AC00_RS16115;product=terminase large subunit domain-containing protein;protein_id=WP_032280322.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 36508 37554 . + . ID=gene-AC00_RS16110;Name=AC00_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16110;old_locus_tag=AC00_1711 NZ_JJLU01000060.1 Protein Homology CDS 36508 37554 . + 0 ID=cds-WP_000087812.1;Parent=gene-AC00_RS16110;Dbxref=GenBank:WP_000087812.1;Name=WP_000087812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000087802.1;locus_tag=AC00_RS16110;product=phage portal protein;protein_id=WP_000087812.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 38040 38309 . - . ID=gene-AC00_RS30290;Name=AC00_RS30290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30290 NZ_JJLU01000060.1 Protein Homology CDS 38040 38309 . - 0 ID=cds-WP_001594304.1;Parent=gene-AC00_RS30290;Dbxref=GenBank:WP_001594304.1;Name=WP_001594304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001390707.1;locus_tag=AC00_RS30290;product=hypothetical protein;protein_id=WP_001594304.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 38674 38985 . - . ID=gene-AC00_RS16105;Name=AC00_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16105;old_locus_tag=AC00_1712 NZ_JJLU01000060.1 Protein Homology CDS 38674 38985 . - 0 ID=cds-WP_000211267.1;Parent=gene-AC00_RS16105;Dbxref=GenBank:WP_000211267.1;Name=WP_000211267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907691.1;locus_tag=AC00_RS16105;product=plasmid partitioning/stability family protein;protein_id=WP_000211267.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 38990 39949 . - . ID=gene-AC00_RS16100;Name=AC00_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16100;old_locus_tag=AC00_1713 NZ_JJLU01000060.1 Protein Homology CDS 38990 39949 . - 0 ID=cds-WP_000708312.1;Parent=gene-AC00_RS16100;Dbxref=GenBank:WP_000708312.1;Name=WP_000708312.1;Ontology_term=GO:0030541,GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;go_process=plasmid partitioning|0030541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310661.1;locus_tag=AC00_RS16100;product=plasmid segregation protein ParM;protein_id=WP_000708312.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 40026 42866 . - . ID=gene-AC00_RS16095;Name=AC00_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16095;old_locus_tag=AC00_1714 NZ_JJLU01000060.1 Protein Homology CDS 40026 42866 . - 0 ID=cds-WP_032280321.1;Parent=gene-AC00_RS16095;Dbxref=GenBank:WP_032280321.1;Name=WP_032280321.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613281.1;locus_tag=AC00_RS16095;product=replication endonuclease;protein_id=WP_032280321.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 42863 43252 . - . ID=gene-AC00_RS16090;Name=AC00_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16090;old_locus_tag=AC00_1715 NZ_JJLU01000060.1 Protein Homology CDS 42863 43252 . - 0 ID=cds-WP_000564224.1;Parent=gene-AC00_RS16090;Dbxref=GenBank:WP_000564224.1;Name=WP_000564224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001534315.1;locus_tag=AC00_RS16090;product=hypothetical protein;protein_id=WP_000564224.1;transl_table=11 NZ_JJLU01000060.1 RefSeq pseudogene 43361 43498 . - . ID=gene-AC00_RS31720;Name=AC00_RS31720;end_range=43498,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31720;partial=true;pseudo=true NZ_JJLU01000060.1 Protein Homology CDS 43361 43498 . - 0 ID=cds-AC00_RS31720;Parent=gene-AC00_RS31720;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=43498,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310656.1;locus_tag=AC00_RS31720;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 43576 43779 . - . ID=gene-AC00_RS16085;Name=AC00_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16085;old_locus_tag=AC00_1716 NZ_JJLU01000060.1 Protein Homology CDS 43576 43779 . - 0 ID=cds-WP_000985152.1;Parent=gene-AC00_RS16085;Dbxref=GenBank:WP_000985152.1;Name=WP_000985152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310654.1;locus_tag=AC00_RS16085;product=hypothetical protein;protein_id=WP_000985152.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 43866 43979 . - . ID=gene-AC00_RS30295;Name=AC00_RS30295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30295;old_locus_tag=AC00_1717 NZ_JJLU01000060.1 Protein Homology CDS 43866 43979 . - 0 ID=cds-WP_000021647.1;Parent=gene-AC00_RS30295;Dbxref=GenBank:WP_000021647.1;Name=WP_000021647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383526.1;locus_tag=AC00_RS30295;product=hypothetical protein;protein_id=WP_000021647.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 43976 44218 . - . ID=gene-AC00_RS16075;Name=AC00_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16075;old_locus_tag=AC00_1718 NZ_JJLU01000060.1 Protein Homology CDS 43976 44218 . - 0 ID=cds-WP_000357025.1;Parent=gene-AC00_RS16075;Dbxref=GenBank:WP_000357025.1;Name=WP_000357025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310652.1;locus_tag=AC00_RS16075;product=DUF4754 family protein;protein_id=WP_000357025.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 44230 44508 . - . ID=gene-AC00_RS16070;Name=AC00_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16070;old_locus_tag=AC00_1719 NZ_JJLU01000060.1 Protein Homology CDS 44230 44508 . - 0 ID=cds-WP_000158976.1;Parent=gene-AC00_RS16070;Dbxref=GenBank:WP_000158976.1;Name=WP_000158976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310651.1;locus_tag=AC00_RS16070;product=hypothetical protein;protein_id=WP_000158976.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 44519 44869 . - . ID=gene-AC00_RS16065;Name=AC00_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16065;old_locus_tag=AC00_1720 NZ_JJLU01000060.1 Protein Homology CDS 44519 44869 . - 0 ID=cds-WP_000742491.1;Parent=gene-AC00_RS16065;Dbxref=GenBank:WP_000742491.1;Name=WP_000742491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310650.1;locus_tag=AC00_RS16065;product=DUF4761 family protein;protein_id=WP_000742491.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 44891 45094 . - . ID=gene-AC00_RS16060;Name=AC00_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16060;old_locus_tag=AC00_1721 NZ_JJLU01000060.1 Protein Homology CDS 44891 45094 . - 0 ID=cds-WP_000014504.1;Parent=gene-AC00_RS16060;Dbxref=GenBank:WP_000014504.1;Name=WP_000014504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310649.1;locus_tag=AC00_RS16060;product=DNA-binding protein;protein_id=WP_000014504.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 45166 45303 . + . ID=gene-AC00_RS30300;Name=AC00_RS30300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30300 NZ_JJLU01000060.1 Protein Homology CDS 45166 45303 . + 0 ID=cds-WP_001673482.1;Parent=gene-AC00_RS30300;Dbxref=GenBank:WP_001673482.1;Name=WP_001673482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305354.1;locus_tag=AC00_RS30300;product=hypothetical protein;protein_id=WP_001673482.1;transl_table=11 NZ_JJLU01000060.1 RefSeq gene 45393 45797 . + . ID=gene-AC00_RS16055;Name=AC00_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16055;old_locus_tag=AC00_1722 NZ_JJLU01000060.1 Protein Homology CDS 45393 45797 . + 0 ID=cds-WP_000786769.1;Parent=gene-AC00_RS16055;Dbxref=GenBank:WP_000786769.1;Name=WP_000786769.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310647.1;locus_tag=AC00_RS16055;product=helix-turn-helix domain-containing protein;protein_id=WP_000786769.1;transl_table=11 NZ_JJLU01000060.1 RefSeq pseudogene 45813 45893 . + . ID=gene-AC00_RS31205;Name=AC00_RS31205;end_range=45893,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31205;partial=true;pseudo=true NZ_JJLU01000060.1 Protein Homology CDS 45813 45893 . + 0 ID=cds-AC00_RS31205;Parent=gene-AC00_RS31205;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=45893,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310646.1;locus_tag=AC00_RS31205;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000060.1 RefSeq pseudogene 45949 46256 . + . ID=gene-AC00_RS0124595;Name=AC00_RS0124595;end_range=46256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124595;partial=true;pseudo=true NZ_JJLU01000060.1 Protein Homology CDS 45949 46256 . + 0 ID=cds-AC00_RS0124595;Parent=gene-AC00_RS0124595;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=46256,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124595;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000061.1 1 1571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000061.1 RefSeq region 1 1571 . + . ID=NZ_JJLU01000061.1:1..1571;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000061.1 RefSeq gene 1 159 . - . ID=gene-AC00_RS27570;Name=AC00_RS27570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27570;old_locus_tag=AC00_1724;partial=true;start_range=.,1 NZ_JJLU01000061.1 Protein Homology CDS 1 159 . - 0 ID=cds-WP_001392608.1;Parent=gene-AC00_RS27570;Dbxref=GenBank:WP_001392608.1;Name=WP_001392608.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27570;partial=true;product=IS1 family transposase;protein_id=WP_001392608.1;start_range=.,1;transl_table=11 NZ_JJLU01000061.1 RefSeq gene 402 1133 . - . ID=gene-AC00_RS0124600;Name=AC00_RS0124600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124600 NZ_JJLU01000061.1 Protein Homology CDS 402 1133 . - 0 ID=cds-WP_001146308.1;Parent=gene-AC00_RS0124600;Dbxref=GenBank:WP_001146308.1;Name=WP_001146308.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001146308.1;locus_tag=AC00_RS0124600;product=helix-turn-helix domain-containing protein;protein_id=WP_001146308.1;transl_table=11 NZ_JJLU01000061.1 RefSeq gene 1337 1571 . + . ID=gene-AC00_RS0124605;Name=AC00_RS0124605;end_range=1571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124605;old_locus_tag=AC00_1726;partial=true NZ_JJLU01000061.1 Protein Homology CDS 1337 1571 . + 0 ID=cds-WP_001408888.1;Parent=gene-AC00_RS0124605;Dbxref=GenBank:WP_001408888.1;Name=WP_001408888.1;end_range=1571,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124605;partial=true;product=IS1-like element transposase;protein_id=WP_001408888.1;transl_table=11 ##sequence-region NZ_JJLU01000062.1 1 4954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000062.1 RefSeq region 1 4954 . + . ID=NZ_JJLU01000062.1:1..4954;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000062.1 RefSeq pseudogene 1 294 . + . ID=gene-AC00_RS16050;Name=AC00_RS16050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16050;old_locus_tag=AC00_1727;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000062.1 Protein Homology CDS 1 294 . + 0 ID=cds-AC00_RS16050;Parent=gene-AC00_RS16050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS16050;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 522 1481 . - . ID=gene-AC00_RS16045;Name=AC00_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16045;old_locus_tag=AC00_1728 NZ_JJLU01000062.1 Protein Homology CDS 522 1481 . - 0 ID=cds-WP_000592547.1;Parent=gene-AC00_RS16045;Dbxref=GenBank:WP_000592547.1;Name=WP_000592547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242627.1;locus_tag=AC00_RS16045;product=YbgA family protein;protein_id=WP_000592547.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 1674 2198 . + . ID=gene-AC00_RS16040;Name=AC00_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16040;old_locus_tag=AC00_1729 NZ_JJLU01000062.1 Protein Homology CDS 1674 2198 . + 0 ID=cds-WP_000780582.1;Parent=gene-AC00_RS16040;Dbxref=GenBank:WP_000780582.1;Name=WP_000780582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001587087.1;locus_tag=AC00_RS16040;product=lipocalin family protein;protein_id=WP_000780582.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 2354 2731 . - . ID=gene-AC00_RS16035;Name=AC00_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16035;old_locus_tag=AC00_1730 NZ_JJLU01000062.1 Protein Homology CDS 2354 2731 . - 0 ID=cds-WP_001204777.1;Parent=gene-AC00_RS16035;Dbxref=GenBank:WP_001204777.1;Name=WP_001204777.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246965.1;locus_tag=AC00_RS16035;product=antiterminator Q family protein;protein_id=WP_001204777.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 2817 2957 . - . ID=gene-AC00_RS16030;Name=AC00_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16030;old_locus_tag=AC00_1731 NZ_JJLU01000062.1 Protein Homology CDS 2817 2957 . - 0 ID=cds-WP_032280912.1;Parent=gene-AC00_RS16030;Dbxref=GenBank:WP_032280912.1;Name=WP_032280912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588439.1;locus_tag=AC00_RS16030;product=YlcG family protein;protein_id=WP_032280912.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 2954 3316 . - . ID=gene-AC00_RS16025;Name=rusA;gbkey=Gene;gene=rusA;gene_biotype=protein_coding;locus_tag=AC00_RS16025;old_locus_tag=AC00_1732 NZ_JJLU01000062.1 Protein Homology CDS 2954 3316 . - 0 ID=cds-WP_032280913.1;Parent=gene-AC00_RS16025;Dbxref=GenBank:WP_032280913.1;Name=WP_032280913.1;Ontology_term=GO:0006281,GO:0006310,GO:0008821;gbkey=CDS;gene=rusA;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309646.1;locus_tag=AC00_RS16025;product=crossover junction endodeoxyribonuclease RusA;protein_id=WP_032280913.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 3313 3603 . - . ID=gene-AC00_RS16020;Name=AC00_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16020;old_locus_tag=AC00_1733 NZ_JJLU01000062.1 Protein Homology CDS 3313 3603 . - 0 ID=cds-WP_032280914.1;Parent=gene-AC00_RS16020;Dbxref=GenBank:WP_032280914.1;Name=WP_032280914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415081.1;locus_tag=AC00_RS16020;product=DUF1364 domain-containing protein;protein_id=WP_032280914.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 3596 3766 . - . ID=gene-AC00_RS0124610;Name=AC00_RS0124610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124610 NZ_JJLU01000062.1 Protein Homology CDS 3596 3766 . - 0 ID=cds-WP_000211034.1;Parent=gene-AC00_RS0124610;Dbxref=GenBank:WP_000211034.1;Name=WP_000211034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309644.1;locus_tag=AC00_RS0124610;product=NinE family protein;protein_id=WP_000211034.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 3766 4221 . - . ID=gene-AC00_RS16015;Name=AC00_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16015;old_locus_tag=AC00_1734 NZ_JJLU01000062.1 Protein Homology CDS 3766 4221 . - 0 ID=cds-WP_032280915.1;Parent=gene-AC00_RS16015;Dbxref=GenBank:WP_032280915.1;Name=WP_032280915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309643.1;locus_tag=AC00_RS16015;product=YbcN family protein;protein_id=WP_032280915.1;transl_table=11 NZ_JJLU01000062.1 RefSeq gene 4218 4319 . - . ID=gene-AC00_RS29510;Name=AC00_RS29510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29510 NZ_JJLU01000062.1 Protein Homology CDS 4218 4319 . - 0 ID=cds-WP_077757380.1;Parent=gene-AC00_RS29510;Dbxref=GenBank:WP_077757380.1;Name=WP_077757380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165308.1;locus_tag=AC00_RS29510;product=hypothetical protein;protein_id=WP_077757380.1;transl_table=11 NZ_JJLU01000062.1 RefSeq pseudogene 4527 4954 . + . ID=gene-AC00_RS29520;Name=AC00_RS29520;end_range=4954,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29520;partial=true;pseudo=true NZ_JJLU01000062.1 Protein Homology CDS 4527 4954 . + 0 ID=cds-AC00_RS29520;Parent=gene-AC00_RS29520;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4954,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC00_RS29520;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000063.1 1 23699 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000063.1 RefSeq region 1 23699 . + . ID=NZ_JJLU01000063.1:1..23699;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000063.1 RefSeq pseudogene 1 594 . + . ID=gene-AC00_RS0124625;Name=AC00_RS0124625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124625;old_locus_tag=AC00_1736;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000063.1 Protein Homology CDS 1 594 . + 1 ID=cds-AC00_RS0124625;Parent=gene-AC00_RS0124625;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS0124625;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 687 3158 . + . ID=gene-AC00_RS16010;Name=AC00_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16010;old_locus_tag=AC00_1737 NZ_JJLU01000063.1 Protein Homology CDS 687 3158 . + 0 ID=cds-WP_032282059.1;Parent=gene-AC00_RS16010;Dbxref=GenBank:WP_032282059.1;Name=WP_032282059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310313.1;locus_tag=AC00_RS16010;product=exonuclease;protein_id=WP_032282059.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 3231 3482 . + . ID=gene-AC00_RS16005;Name=AC00_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS16005;old_locus_tag=AC00_1738 NZ_JJLU01000063.1 Protein Homology CDS 3231 3482 . + 0 ID=cds-WP_000005552.1;Parent=gene-AC00_RS16005;Dbxref=GenBank:WP_000005552.1;Name=WP_000005552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005552.1;locus_tag=AC00_RS16005;product=excisionase family protein;protein_id=WP_000005552.1;transl_table=11 NZ_JJLU01000063.1 RefSeq pseudogene 3517 4797 . + . ID=gene-AC00_RS16000;Name=AC00_RS16000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS16000;old_locus_tag=AC00_1739;pseudo=true NZ_JJLU01000063.1 Protein Homology CDS 3517 4797 . + 0 ID=cds-AC00_RS16000;Parent=gene-AC00_RS16000;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686441.1;locus_tag=AC00_RS16000;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 4985 6004 . - . ID=gene-AC00_RS15995;Name=rspB;gbkey=Gene;gene=rspB;gene_biotype=protein_coding;locus_tag=AC00_RS15995;old_locus_tag=AC00_1741 NZ_JJLU01000063.1 Protein Homology CDS 4985 6004 . - 0 ID=cds-WP_032282061.1;Parent=gene-AC00_RS15995;Dbxref=GenBank:WP_032282061.1;Name=WP_032282061.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=rspB;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416097.1;locus_tag=AC00_RS15995;product=Zn-dependent oxidoreductase;protein_id=WP_032282061.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 6016 7230 . - . ID=gene-AC00_RS15990;Name=rspA;gbkey=Gene;gene=rspA;gene_biotype=protein_coding;locus_tag=AC00_RS15990;old_locus_tag=AC00_1742 NZ_JJLU01000063.1 Protein Homology CDS 6016 7230 . - 0 ID=cds-WP_001295394.1;Parent=gene-AC00_RS15990;Dbxref=GenBank:WP_001295394.1;Name=WP_001295394.1;gbkey=CDS;gene=rspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=AC00_RS15990;product=starvation-sensing protein RspA;protein_id=WP_001295394.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 7437 7763 . - . ID=gene-AC00_RS15985;Name=ynfA;gbkey=Gene;gene=ynfA;gene_biotype=protein_coding;locus_tag=AC00_RS15985;old_locus_tag=AC00_1743 NZ_JJLU01000063.1 Protein Homology CDS 7437 7763 . - 0 ID=cds-WP_001295395.1;Parent=gene-AC00_RS15985;Dbxref=GenBank:WP_001295395.1;Name=WP_001295395.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ynfA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707471.2;locus_tag=AC00_RS15985;product=YnfA family protein;protein_id=WP_001295395.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 7898 8239 . + . ID=gene-AC00_RS15980;Name=ynfB;gbkey=Gene;gene=ynfB;gene_biotype=protein_coding;locus_tag=AC00_RS15980;old_locus_tag=AC00_1744 NZ_JJLU01000063.1 Protein Homology CDS 7898 8239 . + 0 ID=cds-WP_000705197.1;Parent=gene-AC00_RS15980;Dbxref=GenBank:WP_000705197.1;Name=WP_000705197.1;gbkey=CDS;gene=ynfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707472.1;locus_tag=AC00_RS15980;product=DUF1283 family protein;protein_id=WP_000705197.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 8274 8834 . + . ID=gene-AC00_RS15975;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=AC00_RS15975;old_locus_tag=AC00_1745 NZ_JJLU01000063.1 Protein Homology CDS 8274 8834 . + 0 ID=cds-WP_001138584.1;Parent=gene-AC00_RS15975;Dbxref=GenBank:WP_001138584.1;Name=WP_001138584.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310317.1;locus_tag=AC00_RS15975;product=spermidine N1-acetyltransferase;protein_id=WP_001138584.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 8837 9547 . - . ID=gene-AC00_RS15970;Name=ynfC;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=AC00_RS15970;old_locus_tag=AC00_1746 NZ_JJLU01000063.1 Protein Homology CDS 8837 9547 . - 0 ID=cds-WP_072129879.1;Parent=gene-AC00_RS15970;Dbxref=GenBank:WP_072129879.1;Name=WP_072129879.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ynfC;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416102.2;locus_tag=AC00_RS15970;product=YnfC family lipoprotein;protein_id=WP_072129879.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 9655 9960 . + . ID=gene-AC00_RS15965;Name=ynfD;gbkey=Gene;gene=ynfD;gene_biotype=protein_coding;locus_tag=AC00_RS15965;old_locus_tag=AC00_1747 NZ_JJLU01000063.1 Protein Homology CDS 9655 9960 . + 0 ID=cds-WP_032282063.1;Parent=gene-AC00_RS15965;Dbxref=GenBank:WP_032282063.1;Name=WP_032282063.1;gbkey=CDS;gene=ynfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707474.2;locus_tag=AC00_RS15965;product=DUF1161 domain-containing protein;protein_id=WP_032282063.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 10158 12584 . + . ID=gene-AC00_RS15960;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=AC00_RS15960;old_locus_tag=AC00_1748 NZ_JJLU01000063.1 Protein Homology CDS 10158 12584 . + 0 ID=cds-WP_032282064.1;Parent=gene-AC00_RS15960;Dbxref=GenBank:WP_032282064.1;Name=WP_032282064.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416104.1;locus_tag=AC00_RS15960;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_032282064.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 12645 15068 . + . ID=gene-AC00_RS15955;Name=ynfF;gbkey=Gene;gene=ynfF;gene_biotype=protein_coding;locus_tag=AC00_RS15955;old_locus_tag=AC00_1749 NZ_JJLU01000063.1 Protein Homology CDS 12645 15068 . + 0 ID=cds-WP_077757381.1;Parent=gene-AC00_RS15955;Dbxref=GenBank:WP_077757381.1;Name=WP_077757381.1;gbkey=CDS;gene=ynfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416105.4;locus_tag=AC00_RS15955;product=selenate/tellurate reductase subunit YnfF;protein_id=WP_077757381.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 15079 15696 . + . ID=gene-AC00_RS15950;Name=ynfG;gbkey=Gene;gene=ynfG;gene_biotype=protein_coding;locus_tag=AC00_RS15950;old_locus_tag=AC00_1750 NZ_JJLU01000063.1 Protein Homology CDS 15079 15696 . + 0 ID=cds-WP_000213028.1;Parent=gene-AC00_RS15950;Dbxref=GenBank:WP_000213028.1;Name=WP_000213028.1;gbkey=CDS;gene=ynfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=AC00_RS15950;product=DMSO reductase like molybdoenzyme iron-sulfur subunit YnfG;protein_id=WP_000213028.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 15698 16552 . + . ID=gene-AC00_RS15945;Name=ynfH;gbkey=Gene;gene=ynfH;gene_biotype=protein_coding;locus_tag=AC00_RS15945;old_locus_tag=AC00_1751 NZ_JJLU01000063.1 Protein Homology CDS 15698 16552 . + 0 ID=cds-WP_032282066.1;Parent=gene-AC00_RS15945;Dbxref=GenBank:WP_032282066.1;Name=WP_032282066.1;gbkey=CDS;gene=ynfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310323.1;locus_tag=AC00_RS15945;product=selenate reductase membrane anchor subunit YnfH;protein_id=WP_032282066.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 16595 17209 . + . ID=gene-AC00_RS15940;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=AC00_RS15940;old_locus_tag=AC00_1752 NZ_JJLU01000063.1 Protein Homology CDS 16595 17209 . + 0 ID=cds-WP_000148710.1;Parent=gene-AC00_RS15940;Dbxref=GenBank:WP_000148710.1;Name=WP_000148710.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707489.2;locus_tag=AC00_RS15940;product=Tat proofreading chaperone DmsD;protein_id=WP_000148710.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 17367 18659 . + . ID=gene-AC00_RS15935;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=AC00_RS15935;old_locus_tag=AC00_1754 NZ_JJLU01000063.1 Protein Homology CDS 17367 18659 . + 0 ID=cds-WP_071999239.1;Parent=gene-AC00_RS15935;Dbxref=GenBank:WP_071999239.1;Name=WP_071999239.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001296088.1;locus_tag=AC00_RS15935;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_071999239.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 18612 19307 . - . ID=gene-AC00_RS15930;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AC00_RS15930;old_locus_tag=AC00_1755 NZ_JJLU01000063.1 Protein Homology CDS 18612 19307 . - 0 ID=cds-WP_000919231.1;Parent=gene-AC00_RS15930;Dbxref=GenBank:WP_000919231.1;Name=WP_000919231.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310326.2;locus_tag=AC00_RS15930;product=dethiobiotin synthase;protein_id=WP_000919231.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 19432 20652 . - . ID=gene-AC00_RS15925;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=AC00_RS15925;old_locus_tag=AC00_1756 NZ_JJLU01000063.1 Protein Homology CDS 19432 20652 . - 0 ID=cds-WP_000225276.1;Parent=gene-AC00_RS15925;Dbxref=GenBank:WP_000225276.1;Name=WP_000225276.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=AC00_RS15925;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_000225276.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 20787 21680 . - . ID=gene-AC00_RS15920;Name=ynfL;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=AC00_RS15920;old_locus_tag=AC00_1757 NZ_JJLU01000063.1 Protein Homology CDS 20787 21680 . - 0 ID=cds-WP_032282068.1;Parent=gene-AC00_RS15920;Dbxref=GenBank:WP_032282068.1;Name=WP_032282068.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ynfL;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310328.1;locus_tag=AC00_RS15920;product=LysR family transcriptional regulator;protein_id=WP_032282068.1;transl_table=11 NZ_JJLU01000063.1 RefSeq gene 21787 23040 . + . ID=gene-AC00_RS15915;Name=ynfM;gbkey=Gene;gene=ynfM;gene_biotype=protein_coding;locus_tag=AC00_RS15915;old_locus_tag=AC00_1758 NZ_JJLU01000063.1 Protein Homology CDS 21787 23040 . + 0 ID=cds-WP_032282069.1;Parent=gene-AC00_RS15915;Dbxref=GenBank:WP_032282069.1;Name=WP_032282069.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ynfM;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310329.1;locus_tag=AC00_RS15915;product=MFS transporter;protein_id=WP_032282069.1;transl_table=11 NZ_JJLU01000063.1 RefSeq pseudogene 23301 23699 . - . ID=gene-AC00_RS0124635;Name=AC00_RS0124635;end_range=23699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124635;partial=true;pseudo=true NZ_JJLU01000063.1 Protein Homology CDS 23301 23699 . - 0 ID=cds-AC00_RS0124635;Parent=gene-AC00_RS0124635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=23699,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416498.2;locus_tag=AC00_RS0124635;partial=true;product=IS5-like element IS5 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000064.1 1 21764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000064.1 RefSeq region 1 21764 . + . ID=NZ_JJLU01000064.1:1..21764;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000064.1 RefSeq pseudogene 1 212 . - . ID=gene-AC00_RS15910;Name=AC00_RS15910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS15910;old_locus_tag=AC00_1760;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000064.1 Protein Homology CDS 1 212 . - 0 ID=cds-AC00_RS15910;Parent=gene-AC00_RS15910;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS15910;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 594 902 . + . ID=gene-AC00_RS15905;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=AC00_RS15905;old_locus_tag=AC00_1761 NZ_JJLU01000064.1 Protein Homology CDS 594 902 . + 0 ID=cds-WP_001342195.1;Parent=gene-AC00_RS15905;Dbxref=GenBank:WP_001342195.1;Name=WP_001342195.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310330.2;locus_tag=AC00_RS15905;product=acid resistance repetitive basic protein Asr;protein_id=WP_001342195.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 995 1078 . + . ID=gene-AC00_RS0124640;Name=AC00_RS0124640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124640 NZ_JJLU01000064.1 Protein Homology CDS 995 1078 . + 0 ID=cds-WP_000233090.1;Parent=gene-AC00_RS0124640;Dbxref=GenBank:WP_000233090.1;Name=WP_000233090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165320.1;locus_tag=AC00_RS0124640;product=hypothetical protein;protein_id=WP_000233090.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 1178 1999 . + . ID=gene-AC00_RS15900;Name=ydgD;gbkey=Gene;gene=ydgD;gene_biotype=protein_coding;locus_tag=AC00_RS15900;old_locus_tag=AC00_1762 NZ_JJLU01000064.1 Protein Homology CDS 1178 1999 . + 0 ID=cds-WP_001260835.1;Parent=gene-AC00_RS15900;Dbxref=GenBank:WP_001260835.1;Name=WP_001260835.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;gene=ydgD;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310331.2;locus_tag=AC00_RS15900;product=trypsin-like serine peptidase;protein_id=WP_001260835.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 2038 2367 . - . ID=gene-AC00_RS15895;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=AC00_RS15895;old_locus_tag=AC00_1763 NZ_JJLU01000064.1 Protein Homology CDS 2038 2367 . - 0 ID=cds-WP_000046661.1;Parent=gene-AC00_RS15895;Dbxref=GenBank:WP_000046661.1;Name=WP_000046661.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=AC00_RS15895;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_000046661.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 2354 2719 . - . ID=gene-AC00_RS15890;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=AC00_RS15890;old_locus_tag=AC00_1764 NZ_JJLU01000064.1 Protein Homology CDS 2354 2719 . - 0 ID=cds-WP_000276149.1;Parent=gene-AC00_RS15890;Dbxref=GenBank:WP_000276149.1;Name=WP_000276149.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310333.1;locus_tag=AC00_RS15890;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_000276149.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 2826 2996 . - . ID=gene-AC00_RS31725;Name=AC00_RS31725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31725 NZ_JJLU01000064.1 Protein Homology CDS 2826 2996 . - 0 ID=cds-WP_001303517.1;Parent=gene-AC00_RS31725;Dbxref=GenBank:WP_001303517.1;Name=WP_001303517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=AC00_RS31725;product=hypothetical protein;protein_id=WP_001303517.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 3131 4165 . + . ID=gene-AC00_RS15885;Name=tqsA;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;locus_tag=AC00_RS15885;old_locus_tag=AC00_1765 NZ_JJLU01000064.1 Protein Homology CDS 3131 4165 . + 0 ID=cds-WP_001118241.1;Parent=gene-AC00_RS15885;Dbxref=GenBank:WP_001118241.1;Name=WP_001118241.1;gbkey=CDS;gene=tqsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416118.1;locus_tag=AC00_RS15885;product=AI-2 transporter TqsA;protein_id=WP_001118241.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 4190 5578 . - . ID=gene-AC00_RS15880;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AC00_RS15880;old_locus_tag=AC00_1766 NZ_JJLU01000064.1 Protein Homology CDS 4190 5578 . - 0 ID=cds-WP_000014036.1;Parent=gene-AC00_RS15880;Dbxref=GenBank:WP_000014036.1;Name=WP_000014036.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=AC00_RS15880;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_000014036.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 5589 7121 . - . ID=gene-AC00_RS15875;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AC00_RS15875;old_locus_tag=AC00_1767 NZ_JJLU01000064.1 Protein Homology CDS 5589 7121 . - 0 ID=cds-WP_032280921.1;Parent=gene-AC00_RS15875;Dbxref=GenBank:WP_032280921.1;Name=WP_032280921.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416120.1;locus_tag=AC00_RS15875;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_032280921.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 7645 8589 . + . ID=gene-AC00_RS15870;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=AC00_RS15870;old_locus_tag=AC00_1768 NZ_JJLU01000064.1 Protein Homology CDS 7645 8589 . + 0 ID=cds-WP_000769322.1;Parent=gene-AC00_RS15870;Dbxref=GenBank:WP_000769322.1;Name=WP_000769322.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310337.1;locus_tag=AC00_RS15870;product=DUF1471 family protein YdgH;protein_id=WP_000769322.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 8775 10157 . + . ID=gene-AC00_RS15865;Name=ydgI;gbkey=Gene;gene=ydgI;gene_biotype=protein_coding;locus_tag=AC00_RS15865;old_locus_tag=AC00_1769 NZ_JJLU01000064.1 Protein Homology CDS 8775 10157 . + 0 ID=cds-WP_000412379.1;Parent=gene-AC00_RS15865;Dbxref=GenBank:WP_000412379.1;Name=WP_000412379.1;gbkey=CDS;gene=ydgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=AC00_RS15865;product=amino acid permease;protein_id=WP_000412379.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 10194 10916 . + . ID=gene-AC00_RS15860;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=AC00_RS15860;old_locus_tag=AC00_1770 NZ_JJLU01000064.1 Protein Homology CDS 10194 10916 . + 0 ID=cds-WP_000520804.1;Parent=gene-AC00_RS15860;Dbxref=GenBank:WP_000520804.1;Name=WP_000520804.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310339.1;locus_tag=AC00_RS15860;product=dihydromonapterin reductase;protein_id=WP_000520804.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 10913 11248 . - . ID=gene-AC00_RS15855;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=AC00_RS15855;old_locus_tag=AC00_1771 NZ_JJLU01000064.1 Protein Homology CDS 10913 11248 . - 0 ID=cds-WP_000524868.1;Parent=gene-AC00_RS15855;Dbxref=GenBank:WP_000524868.1;Name=WP_000524868.1;gbkey=CDS;gene=ydgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310340.1;locus_tag=AC00_RS15855;product=GlpM family protein;protein_id=WP_000524868.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 11377 12096 . + . ID=gene-AC00_RS15850;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=AC00_RS15850;old_locus_tag=AC00_1772 NZ_JJLU01000064.1 Protein Homology CDS 11377 12096 . + 0 ID=cds-WP_001092508.1;Parent=gene-AC00_RS15850;Dbxref=GenBank:WP_001092508.1;Name=WP_001092508.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416125.2;locus_tag=AC00_RS15850;product=two-component system response regulator RstA;protein_id=WP_001092508.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 12100 13401 . + . ID=gene-AC00_RS15845;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=AC00_RS15845;old_locus_tag=AC00_1773 NZ_JJLU01000064.1 Protein Homology CDS 12100 13401 . + 0 ID=cds-WP_032280922.1;Parent=gene-AC00_RS15845;Dbxref=GenBank:WP_032280922.1;Name=WP_032280922.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310342.2;locus_tag=AC00_RS15845;product=two-component system sensor histidine kinase RstB;protein_id=WP_032280922.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 13477 14406 . + . ID=gene-AC00_RS15840;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=AC00_RS15840;old_locus_tag=AC00_1774 NZ_JJLU01000064.1 Protein Homology CDS 13477 14406 . + 0 ID=cds-WP_001489591.1;Parent=gene-AC00_RS15840;Dbxref=GenBank:WP_001489591.1;Name=WP_001489591.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310343.1;locus_tag=AC00_RS15840;product=DNA replication terminus site-binding protein;protein_id=WP_001489591.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 14403 15806 . - . ID=gene-AC00_RS15835;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AC00_RS15835;old_locus_tag=AC00_1775 NZ_JJLU01000064.1 Protein Homology CDS 14403 15806 . - 0 ID=cds-WP_032280924.1;Parent=gene-AC00_RS15835;Dbxref=GenBank:WP_032280924.1;Name=WP_032280924.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310344.1;locus_tag=AC00_RS15835;product=class II fumarate hydratase;protein_id=WP_032280924.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 15949 17595 . - . ID=gene-AC00_RS15830;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AC00_RS15830;old_locus_tag=AC00_1776 NZ_JJLU01000064.1 Protein Homology CDS 15949 17595 . - 0 ID=cds-WP_000066639.1;Parent=gene-AC00_RS15830;Dbxref=GenBank:WP_000066639.1;Name=WP_000066639.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=AC00_RS15830;product=class I fumarate hydratase;protein_id=WP_000066639.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 17794 18969 . + . ID=gene-AC00_RS15825;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=AC00_RS15825;old_locus_tag=AC00_1777 NZ_JJLU01000064.1 Protein Homology CDS 17794 18969 . + 0 ID=cds-WP_032280926.1;Parent=gene-AC00_RS15825;Dbxref=GenBank:WP_032280926.1;Name=WP_032280926.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310346.1;locus_tag=AC00_RS15825;product=mannose-6-phosphate isomerase;protein_id=WP_032280926.1;transl_table=11 NZ_JJLU01000064.1 RefSeq gene 19070 20578 . + . ID=gene-AC00_RS15820;Name=ydgA;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=AC00_RS15820;old_locus_tag=AC00_1778 NZ_JJLU01000064.1 Protein Homology CDS 19070 20578 . + 0 ID=cds-WP_001043362.1;Parent=gene-AC00_RS15820;Dbxref=GenBank:WP_001043362.1;Name=WP_001043362.1;gbkey=CDS;gene=ydgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310347.1;locus_tag=AC00_RS15820;product=YdgA family protein;protein_id=WP_001043362.1;transl_table=11 NZ_JJLU01000064.1 RefSeq pseudogene 20623 21396 . - . ID=gene-AC00_RS0124645;Name=AC00_RS0124645;end_range=21396,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124645;old_locus_tag=AC00_1779;partial=true;pseudo=true NZ_JJLU01000064.1 Protein Homology CDS 20623 21396 . - 0 ID=cds-AC00_RS0124645;Parent=gene-AC00_RS0124645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21396,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416132.2;locus_tag=AC00_RS0124645;partial=true;product=glucuronide uptake porin UidC;pseudo=true;transl_table=11 NZ_JJLU01000064.1 RefSeq pseudogene 21411 21764 . - . ID=gene-AC00_RS15815;Name=AC00_RS15815;end_range=21764,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS15815;old_locus_tag=AC00_1780;partial=true;pseudo=true NZ_JJLU01000064.1 Protein Homology CDS 21411 21764 . - 0 ID=cds-AC00_RS15815;Parent=gene-AC00_RS15815;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=21764,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS15815;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000065.1 1 71981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000065.1 RefSeq region 1 71981 . + . ID=NZ_JJLU01000065.1:1..71981;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000065.1 RefSeq gene 1 2209 . + . ID=gene-AC00_RS15810;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AC00_RS15810;old_locus_tag=AC00_1782;partial=true;start_range=.,1 NZ_JJLU01000065.1 Protein Homology CDS 1 2209 . + 1 ID=cds-WP_032288209.1;Parent=gene-AC00_RS15810;Dbxref=GenBank:WP_032288209.1;Name=WP_032288209.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310365.1;locus_tag=AC00_RS15810;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_032288209.1;start_range=.,1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 2210 3268 . + . ID=gene-AC00_RS15805;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=AC00_RS15805;old_locus_tag=AC00_1783 NZ_JJLU01000065.1 Protein Homology CDS 2210 3268 . + 0 ID=cds-WP_032280938.1;Parent=gene-AC00_RS15805;Dbxref=GenBank:WP_032280938.1;Name=WP_032280938.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310366.1;locus_tag=AC00_RS15805;product=electron transport complex subunit RsxD;protein_id=WP_032280938.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 3272 3892 . + . ID=gene-AC00_RS15800;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=AC00_RS15800;old_locus_tag=AC00_1784 NZ_JJLU01000065.1 Protein Homology CDS 3272 3892 . + 0 ID=cds-WP_032280939.1;Parent=gene-AC00_RS15800;Dbxref=GenBank:WP_032280939.1;Name=WP_032280939.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=AC00_RS15800;product=electron transport complex subunit RsxG;protein_id=WP_032280939.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 3896 4591 . + . ID=gene-AC00_RS15795;Name=rsxE;gbkey=Gene;gene=rsxE;gene_biotype=protein_coding;locus_tag=AC00_RS15795;old_locus_tag=AC00_1785 NZ_JJLU01000065.1 Protein Homology CDS 3896 4591 . + 0 ID=cds-WP_001289657.1;Parent=gene-AC00_RS15795;Dbxref=GenBank:WP_001289657.1;Name=WP_001289657.1;gbkey=CDS;gene=rsxE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310368.1;locus_tag=AC00_RS15795;product=electron transport complex subunit RsxE;protein_id=WP_001289657.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 4591 5226 . + . ID=gene-AC00_RS15790;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AC00_RS15790;old_locus_tag=AC00_1786 NZ_JJLU01000065.1 Protein Homology CDS 4591 5226 . + 0 ID=cds-WP_001030339.1;Parent=gene-AC00_RS15790;Dbxref=GenBank:WP_001030339.1;Name=WP_001030339.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416150.1;locus_tag=AC00_RS15790;product=endonuclease III;protein_id=WP_001030339.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 5837 7339 . + . ID=gene-AC00_RS15785;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=AC00_RS15785;old_locus_tag=AC00_1787 NZ_JJLU01000065.1 Protein Homology CDS 5837 7339 . + 0 ID=cds-WP_000100937.1;Parent=gene-AC00_RS15785;Dbxref=GenBank:WP_000100937.1;Name=WP_000100937.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310370.1;locus_tag=AC00_RS15785;product=dipeptide/tripeptide permease DtpA;protein_id=WP_000100937.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 7445 8050 . + . ID=gene-AC00_RS15780;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=AC00_RS15780;old_locus_tag=AC00_1788 NZ_JJLU01000065.1 Protein Homology CDS 7445 8050 . + 0 ID=cds-WP_000765750.1;Parent=gene-AC00_RS15780;Dbxref=GenBank:WP_000765750.1;Name=WP_000765750.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310371.1;locus_tag=AC00_RS15780;product=glutathione transferase GstA;protein_id=WP_000765750.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 8094 8954 . - . ID=gene-AC00_RS15775;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=AC00_RS15775;old_locus_tag=AC00_1789 NZ_JJLU01000065.1 Protein Homology CDS 8094 8954 . - 0 ID=cds-WP_032280941.1;Parent=gene-AC00_RS15775;Dbxref=GenBank:WP_032280941.1;Name=WP_032280941.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310372.2;locus_tag=AC00_RS15775;product=pyridoxal kinase PdxY;protein_id=WP_032280941.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 9016 10290 . - . ID=gene-AC00_RS15770;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AC00_RS15770;old_locus_tag=AC00_1790 NZ_JJLU01000065.1 Protein Homology CDS 9016 10290 . - 0 ID=cds-WP_032280942.1;Parent=gene-AC00_RS15770;Dbxref=GenBank:WP_032280942.1;Name=WP_032280942.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=AC00_RS15770;product=tyrosine--tRNA ligase;protein_id=WP_032280942.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 10419 11075 . - . ID=gene-AC00_RS15765;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=AC00_RS15765;old_locus_tag=AC00_1791 NZ_JJLU01000065.1 Protein Homology CDS 10419 11075 . - 0 ID=cds-WP_001282319.1;Parent=gene-AC00_RS15765;Dbxref=GenBank:WP_001282319.1;Name=WP_001282319.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=AC00_RS15765;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_001282319.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 11134 11463 . - . ID=gene-AC00_RS15760;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=AC00_RS15760;old_locus_tag=AC00_1792 NZ_JJLU01000065.1 Protein Homology CDS 11134 11463 . - 0 ID=cds-WP_000061975.1;Parent=gene-AC00_RS15760;Dbxref=GenBank:WP_000061975.1;Name=WP_000061975.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416156.4;locus_tag=AC00_RS15760;product=C-type lysozyme inhibitor;protein_id=WP_000061975.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 11561 12670 . - . ID=gene-AC00_RS15755;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AC00_RS15755;old_locus_tag=AC00_1793 NZ_JJLU01000065.1 Protein Homology CDS 11561 12670 . - 0 ID=cds-WP_032280943.1;Parent=gene-AC00_RS15755;Dbxref=GenBank:WP_032280943.1;Name=WP_032280943.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416157.1;locus_tag=AC00_RS15755;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_032280943.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 12944 13411 . + . ID=gene-AC00_RS15750;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=AC00_RS15750;old_locus_tag=AC00_1794 NZ_JJLU01000065.1 Protein Homology CDS 12944 13411 . + 0 ID=cds-WP_000597196.1;Parent=gene-AC00_RS15750;Dbxref=GenBank:WP_000597196.1;Name=WP_000597196.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310377.1;locus_tag=AC00_RS15750;product=outer membrane lipoprotein SlyB;protein_id=WP_000597196.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 13458 13892 . - . ID=gene-AC00_RS15745;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=AC00_RS15745;old_locus_tag=AC00_1795 NZ_JJLU01000065.1 Protein Homology CDS 13458 13892 . - 0 ID=cds-WP_001296943.1;Parent=gene-AC00_RS15745;Dbxref=GenBank:WP_001296943.1;Name=WP_001296943.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416159.2;locus_tag=AC00_RS15745;product=transcriptional regulator SlyA;protein_id=WP_001296943.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 14093 14329 . + . ID=gene-AC00_RS15740;Name=ydhI;gbkey=Gene;gene=ydhI;gene_biotype=protein_coding;locus_tag=AC00_RS15740;old_locus_tag=AC00_1797 NZ_JJLU01000065.1 Protein Homology CDS 14093 14329 . + 0 ID=cds-WP_000670998.1;Parent=gene-AC00_RS15740;Dbxref=GenBank:WP_000670998.1;Name=WP_000670998.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydhI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310379.1;locus_tag=AC00_RS15740;product=DUF1656 domain-containing protein;protein_id=WP_000670998.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 14332 15189 . + . ID=gene-AC00_RS15735;Name=ydhJ;gbkey=Gene;gene=ydhJ;gene_biotype=protein_coding;locus_tag=AC00_RS15735;old_locus_tag=AC00_1798 NZ_JJLU01000065.1 Protein Homology CDS 14332 15189 . + 0 ID=cds-WP_032288210.1;Parent=gene-AC00_RS15735;Dbxref=GenBank:WP_032288210.1;Name=WP_032288210.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;gene=ydhJ;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416161.4;locus_tag=AC00_RS15735;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_032288210.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 15189 17201 . + . ID=gene-AC00_RS15730;Name=ydhK;gbkey=Gene;gene=ydhK;gene_biotype=protein_coding;locus_tag=AC00_RS15730;old_locus_tag=AC00_1799 NZ_JJLU01000065.1 Protein Homology CDS 15189 17201 . + 0 ID=cds-WP_000994312.1;Parent=gene-AC00_RS15730;Dbxref=GenBank:WP_000994312.1;Name=WP_000994312.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=ydhK;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416162.1;locus_tag=AC00_RS15730;product=FUSC family protein;protein_id=WP_000994312.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 17202 17723 . - . ID=gene-AC00_RS15725;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AC00_RS15725;old_locus_tag=AC00_1800 NZ_JJLU01000065.1 Protein Homology CDS 17202 17723 . - 0 ID=cds-WP_032280968.1;Parent=gene-AC00_RS15725;Dbxref=GenBank:WP_032280968.1;Name=WP_032280968.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310382.1;locus_tag=AC00_RS15725;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_032280968.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 17804 18700 . - . ID=gene-AC00_RS15720;Name=ydhF;gbkey=Gene;gene=ydhF;gene_biotype=protein_coding;locus_tag=AC00_RS15720;old_locus_tag=AC00_1801 NZ_JJLU01000065.1 Protein Homology CDS 17804 18700 . - 0 ID=cds-WP_000250656.1;Parent=gene-AC00_RS15720;Dbxref=GenBank:WP_000250656.1;Name=WP_000250656.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;gene=ydhF;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=AC00_RS15720;product=aldo/keto reductase;protein_id=WP_000250656.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 18749 18988 . - . ID=gene-AC00_RS0124655;Name=ydhL;gbkey=Gene;gene=ydhL;gene_biotype=protein_coding;locus_tag=AC00_RS0124655 NZ_JJLU01000065.1 Protein Homology CDS 18749 18988 . - 0 ID=cds-WP_000840481.1;Parent=gene-AC00_RS0124655;Dbxref=GenBank:WP_000840481.1;Name=WP_000840481.1;gbkey=CDS;gene=ydhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416165.2;locus_tag=AC00_RS0124655;product=DUF1289 domain-containing protein;protein_id=WP_000840481.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 19091 19690 . + . ID=gene-AC00_RS15715;Name=nemR;gbkey=Gene;gene=nemR;gene_biotype=protein_coding;locus_tag=AC00_RS15715;old_locus_tag=AC00_1803 NZ_JJLU01000065.1 Protein Homology CDS 19091 19690 . + 0 ID=cds-WP_001032936.1;Parent=gene-AC00_RS15715;Dbxref=GenBank:WP_001032936.1;Name=WP_001032936.1;gbkey=CDS;gene=nemR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416166.3;locus_tag=AC00_RS15715;product=DNA-binding transcriptional regulator NemR;protein_id=WP_001032936.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 19727 20824 . + . ID=gene-AC00_RS15710;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=AC00_RS15710;old_locus_tag=AC00_1804 NZ_JJLU01000065.1 Protein Homology CDS 19727 20824 . + 0 ID=cds-WP_032280945.1;Parent=gene-AC00_RS15710;Dbxref=GenBank:WP_032280945.1;Name=WP_032280945.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416167.1;locus_tag=AC00_RS15710;product=N-ethylmaleimide reductase;protein_id=WP_032280945.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 20905 21312 . + . ID=gene-AC00_RS15705;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AC00_RS15705;old_locus_tag=AC00_1805 NZ_JJLU01000065.1 Protein Homology CDS 20905 21312 . + 0 ID=cds-WP_001237796.1;Parent=gene-AC00_RS15705;Dbxref=GenBank:WP_001237796.1;Name=WP_001237796.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=AC00_RS15705;product=lactoylglutathione lyase;protein_id=WP_001237796.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 21415 22062 . + . ID=gene-AC00_RS15700;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=AC00_RS15700;old_locus_tag=AC00_1806 NZ_JJLU01000065.1 Protein Homology CDS 21415 22062 . + 0 ID=cds-WP_001282281.1;Parent=gene-AC00_RS15700;Dbxref=GenBank:WP_001282281.1;Name=WP_001282281.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310388.1;locus_tag=AC00_RS15700;product=ribonuclease T;protein_id=WP_001282281.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 22155 26771 . + . ID=gene-AC00_RS15695;Name=lhr;gbkey=Gene;gene=lhr;gene_biotype=protein_coding;locus_tag=AC00_RS15695;old_locus_tag=AC00_1807 NZ_JJLU01000065.1 Protein Homology CDS 22155 26771 . + 0 ID=cds-WP_032280946.1;Parent=gene-AC00_RS15695;Dbxref=GenBank:WP_032280946.1;Name=WP_032280946.1;Ontology_term=GO:0003676,GO:0005524,GO:0016818;gbkey=CDS;gene=lhr;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310389.1;locus_tag=AC00_RS15695;product=ATP-dependent helicase;protein_id=WP_032280946.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 26822 27169 . - . ID=gene-AC00_RS15690;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AC00_RS15690;old_locus_tag=AC00_1808 NZ_JJLU01000065.1 Protein Homology CDS 26822 27169 . - 0 ID=cds-WP_000108172.1;Parent=gene-AC00_RS15690;Dbxref=GenBank:WP_000108172.1;Name=WP_000108172.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310390.1;locus_tag=AC00_RS15690;product=monothiol glutaredoxin 4;protein_id=WP_000108172.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 27504 28331 . + . ID=gene-AC00_RS15685;Name=mepH;gbkey=Gene;gene=mepH;gene_biotype=protein_coding;locus_tag=AC00_RS15685;old_locus_tag=AC00_1809 NZ_JJLU01000065.1 Protein Homology CDS 27504 28331 . + 0 ID=cds-WP_000101186.1;Parent=gene-AC00_RS15685;Dbxref=GenBank:WP_000101186.1;Name=WP_000101186.1;gbkey=CDS;gene=mepH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310391.1;locus_tag=AC00_RS15685;product=peptidoglycan DD-endopeptidase MepH;protein_id=WP_000101186.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 28459 29040 . + . ID=gene-AC00_RS15680;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=AC00_RS15680;old_locus_tag=AC00_1810 NZ_JJLU01000065.1 Protein Homology CDS 28459 29040 . + 0 ID=cds-WP_000007283.1;Parent=gene-AC00_RS15680;Dbxref=GenBank:WP_000007283.1;Name=WP_000007283.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310392.1;locus_tag=AC00_RS15680;product=superoxide dismutase [Fe];protein_id=WP_000007283.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 29186 30355 . - . ID=gene-AC00_RS15675;Name=ydhP;gbkey=Gene;gene=ydhP;gene_biotype=protein_coding;locus_tag=AC00_RS15675;old_locus_tag=AC00_1811 NZ_JJLU01000065.1 Protein Homology CDS 29186 30355 . - 0 ID=cds-WP_000701040.1;Parent=gene-AC00_RS15675;Dbxref=GenBank:WP_000701040.1;Name=WP_000701040.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;gene=ydhP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416174.1;locus_tag=AC00_RS15675;product=MFS transporter;protein_id=WP_000701040.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 30520 30609 . - . ID=gene-AC00_RS0124660;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=AC00_RS0124660;old_locus_tag=AC00_1812 NZ_JJLU01000065.1 Protein Homology CDS 30520 30609 . - 0 ID=cds-WP_000102278.1;Parent=gene-AC00_RS0124660;Dbxref=GenBank:WP_000102278.1;Name=WP_000102278.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=AC00_RS0124660;product=cytochrome bd-I accessory subunit CydH;protein_id=WP_000102278.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 30908 31933 . + . ID=gene-AC00_RS15670;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=AC00_RS15670;old_locus_tag=AC00_1813 NZ_JJLU01000065.1 Protein Homology CDS 30908 31933 . + 0 ID=cds-WP_000190982.1;Parent=gene-AC00_RS15670;Dbxref=GenBank:WP_000190982.1;Name=WP_000190982.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=AC00_RS15670;product=HTH-type transcriptional repressor PurR;protein_id=WP_000190982.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 31930 32862 . - . ID=gene-AC00_RS15665;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=AC00_RS15665;old_locus_tag=AC00_1814 NZ_JJLU01000065.1 Protein Homology CDS 31930 32862 . - 0 ID=cds-WP_001405254.1;Parent=gene-AC00_RS15665;Dbxref=GenBank:WP_001405254.1;Name=WP_001405254.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310395.1;locus_tag=AC00_RS15665;product=DNA-binding transcriptional activator PunR;protein_id=WP_001405254.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 32975 34186 . + . ID=gene-AC00_RS15660;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=AC00_RS15660;old_locus_tag=AC00_1815 NZ_JJLU01000065.1 Protein Homology CDS 32975 34186 . + 0 ID=cds-WP_001182346.1;Parent=gene-AC00_RS15660;Dbxref=GenBank:WP_001182346.1;Name=WP_001182346.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310396.1;locus_tag=AC00_RS15660;product=purine nucleoside transporter PunC;protein_id=WP_001182346.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 34477 35625 . + . ID=gene-AC00_RS15655;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=AC00_RS15655;old_locus_tag=AC00_1816 NZ_JJLU01000065.1 Protein Homology CDS 34477 35625 . + 0 ID=cds-WP_000098896.1;Parent=gene-AC00_RS15655;Dbxref=GenBank:WP_000098896.1;Name=WP_000098896.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416178.1;locus_tag=AC00_RS15655;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_000098896.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 35665 36306 . - . ID=gene-AC00_RS15650;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=AC00_RS15650;old_locus_tag=AC00_1817 NZ_JJLU01000065.1 Protein Homology CDS 35665 36306 . - 0 ID=cds-WP_000493947.1;Parent=gene-AC00_RS15650;Dbxref=GenBank:WP_000493947.1;Name=WP_000493947.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416179.1;locus_tag=AC00_RS15650;product=riboflavin synthase;protein_id=WP_000493947.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 36521 37894 . + . ID=gene-AC00_RS15645;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=AC00_RS15645;old_locus_tag=AC00_1818 NZ_JJLU01000065.1 Protein Homology CDS 36521 37894 . + 0 ID=cds-WP_032280948.1;Parent=gene-AC00_RS15645;Dbxref=GenBank:WP_032280948.1;Name=WP_032280948.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025307.1;locus_tag=AC00_RS15645;product=multidrug efflux MATE transporter MdtK;protein_id=WP_032280948.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 37935 39191 . - . ID=gene-AC00_RS15640;Name=ydhQ;gbkey=Gene;gene=ydhQ;gene_biotype=protein_coding;locus_tag=AC00_RS15640;old_locus_tag=AC00_1819 NZ_JJLU01000065.1 Protein Homology CDS 37935 39191 . - 0 ID=cds-WP_032280949.1;Parent=gene-AC00_RS15640;Dbxref=GenBank:WP_032280949.1;Name=WP_032280949.1;gbkey=CDS;gene=ydhQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310400.1;locus_tag=AC00_RS15640;product=AIDA repeat-containing protein;protein_id=WP_032280949.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 39499 39575 . + . ID=gene-AC00_RS15635;Name=AC00_RS15635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS15635;old_locus_tag=AC00_1820 NZ_JJLU01000065.1 tRNAscan-SE tRNA 39499 39575 . + . ID=rna-AC00_RS15635;Parent=gene-AC00_RS15635;anticodon=(pos:39533..39535);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS15635;product=tRNA-Val NZ_JJLU01000065.1 tRNAscan-SE exon 39499 39575 . + . ID=exon-AC00_RS15635-1;Parent=rna-AC00_RS15635;anticodon=(pos:39533..39535);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS15635;product=tRNA-Val NZ_JJLU01000065.1 RefSeq gene 39580 39656 . + . ID=gene-AC00_RS15630;Name=AC00_RS15630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS15630;old_locus_tag=AC00_1821 NZ_JJLU01000065.1 tRNAscan-SE tRNA 39580 39656 . + . ID=rna-AC00_RS15630;Parent=gene-AC00_RS15630;anticodon=(pos:39614..39616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS15630;product=tRNA-Val NZ_JJLU01000065.1 tRNAscan-SE exon 39580 39656 . + . ID=exon-AC00_RS15630-1;Parent=rna-AC00_RS15630;anticodon=(pos:39614..39616);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS15630;product=tRNA-Val NZ_JJLU01000065.1 RefSeq gene 39764 40069 . + . ID=gene-AC00_RS15625;Name=ydhR;gbkey=Gene;gene=ydhR;gene_biotype=protein_coding;locus_tag=AC00_RS15625;old_locus_tag=AC00_1822 NZ_JJLU01000065.1 Protein Homology CDS 39764 40069 . + 0 ID=cds-WP_000212657.1;Parent=gene-AC00_RS15625;Dbxref=GenBank:WP_000212657.1;Name=WP_000212657.1;gbkey=CDS;gene=ydhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416182.1;locus_tag=AC00_RS15625;product=monooxygenase;protein_id=WP_000212657.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 40195 41799 . + . ID=gene-AC00_RS15620;Name=ydhS;gbkey=Gene;gene=ydhS;gene_biotype=protein_coding;locus_tag=AC00_RS15620;old_locus_tag=AC00_1823 NZ_JJLU01000065.1 Protein Homology CDS 40195 41799 . + 0 ID=cds-WP_032280951.1;Parent=gene-AC00_RS15620;Dbxref=GenBank:WP_032280951.1;Name=WP_032280951.1;gbkey=CDS;gene=ydhS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310402.1;locus_tag=AC00_RS15620;product=FAD-NAD(P)-binding protein;protein_id=WP_032280951.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 41811 42623 . - . ID=gene-AC00_RS15615;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=AC00_RS15615;old_locus_tag=AC00_1824 NZ_JJLU01000065.1 Protein Homology CDS 41811 42623 . - 0 ID=cds-WP_032280952.1;Parent=gene-AC00_RS15615;Dbxref=GenBank:WP_032280952.1;Name=WP_032280952.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416184.1;locus_tag=AC00_RS15615;product=protein YdhT;protein_id=WP_032280952.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 42627 43412 . - . ID=gene-AC00_RS15610;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=AC00_RS15610;old_locus_tag=AC00_1825 NZ_JJLU01000065.1 Protein Homology CDS 42627 43412 . - 0 ID=cds-WP_032280953.1;Parent=gene-AC00_RS15610;Dbxref=GenBank:WP_032280953.1;Name=WP_032280953.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310404.1;locus_tag=AC00_RS15610;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_032280953.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 43409 44077 . - . ID=gene-AC00_RS15605;Name=ydhX;gbkey=Gene;gene=ydhX;gene_biotype=protein_coding;locus_tag=AC00_RS15605;old_locus_tag=AC00_1826 NZ_JJLU01000065.1 Protein Homology CDS 43409 44077 . - 0 ID=cds-WP_001676577.1;Parent=gene-AC00_RS15605;Dbxref=GenBank:WP_001676577.1;Name=WP_001676577.1;gbkey=CDS;gene=ydhX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416186.4;locus_tag=AC00_RS15605;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_001676577.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 44141 44779 . - . ID=gene-AC00_RS15600;Name=ydhW;gbkey=Gene;gene=ydhW;gene_biotype=protein_coding;locus_tag=AC00_RS15600;old_locus_tag=AC00_1827 NZ_JJLU01000065.1 Protein Homology CDS 44141 44779 . - 0 ID=cds-WP_001536958.1;Parent=gene-AC00_RS15600;Dbxref=GenBank:WP_001536958.1;Name=WP_001536958.1;gbkey=CDS;gene=ydhW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310406.2;locus_tag=AC00_RS15600;product=YdhW family putative oxidoreductase system protein;protein_id=WP_001536958.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 44792 46894 . - . ID=gene-AC00_RS15595;Name=ydhV;gbkey=Gene;gene=ydhV;gene_biotype=protein_coding;locus_tag=AC00_RS15595;old_locus_tag=AC00_1828 NZ_JJLU01000065.1 Protein Homology CDS 44792 46894 . - 0 ID=cds-WP_032280954.1;Parent=gene-AC00_RS15595;Dbxref=GenBank:WP_032280954.1;Name=WP_032280954.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=ydhV;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=AC00_RS15595;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_032280954.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 46915 47541 . - . ID=gene-AC00_RS15590;Name=ydhY;gbkey=Gene;gene=ydhY;gene_biotype=protein_coding;locus_tag=AC00_RS15590;old_locus_tag=AC00_1829 NZ_JJLU01000065.1 Protein Homology CDS 46915 47541 . - 0 ID=cds-WP_032280955.1;Parent=gene-AC00_RS15590;Dbxref=GenBank:WP_032280955.1;Name=WP_032280955.1;gbkey=CDS;gene=ydhY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310408.1;locus_tag=AC00_RS15590;product=ferredoxin-like protein;protein_id=WP_032280955.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 47997 48206 . - . ID=gene-AC00_RS15585;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=AC00_RS15585;old_locus_tag=AC00_1831 NZ_JJLU01000065.1 Protein Homology CDS 47997 48206 . - 0 ID=cds-WP_000528342.1;Parent=gene-AC00_RS15585;Dbxref=GenBank:WP_000528342.1;Name=WP_000528342.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310409.1;locus_tag=AC00_RS15585;product=fumarate hydratase FumD;protein_id=WP_000528342.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 48561 48755 . + . ID=gene-AC00_RS31210;Name=AC00_RS31210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31210 NZ_JJLU01000065.1 Protein Homology CDS 48561 48755 . + 0 ID=cds-WP_240806354.1;Parent=gene-AC00_RS31210;Dbxref=GenBank:WP_240806354.1;Name=WP_240806354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283910.1;locus_tag=AC00_RS31210;product=protein YnhH;protein_id=WP_240806354.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 48763 50175 . + . ID=gene-AC00_RS15580;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=AC00_RS15580;old_locus_tag=AC00_1832 NZ_JJLU01000065.1 Protein Homology CDS 48763 50175 . + 0 ID=cds-WP_001295403.1;Parent=gene-AC00_RS15580;Dbxref=GenBank:WP_001295403.1;Name=WP_001295403.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=AC00_RS15580;product=pyruvate kinase PykF;protein_id=WP_001295403.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 50486 50722 . + . ID=gene-AC00_RS15575;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=AC00_RS15575;old_locus_tag=AC00_1833 NZ_JJLU01000065.1 Protein Homology CDS 50486 50722 . + 0 ID=cds-WP_000648420.1;Parent=gene-AC00_RS15575;Dbxref=GenBank:WP_000648420.1;Name=WP_000648420.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310411.1;locus_tag=AC00_RS15575;product=murein lipoprotein Lpp;protein_id=WP_000648420.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 50785 51789 . - . ID=gene-AC00_RS15570;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=AC00_RS15570;old_locus_tag=AC00_1834 NZ_JJLU01000065.1 Protein Homology CDS 50785 51789 . - 0 ID=cds-WP_000817098.1;Parent=gene-AC00_RS15570;Dbxref=GenBank:WP_000817098.1;Name=WP_000817098.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310412.1;locus_tag=AC00_RS15570;product=L%2CD-transpeptidase LdtE;protein_id=WP_000817098.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 51938 52354 . - . ID=gene-AC00_RS15565;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=AC00_RS15565;old_locus_tag=AC00_1835 NZ_JJLU01000065.1 Protein Homology CDS 51938 52354 . - 0 ID=cds-WP_032280958.1;Parent=gene-AC00_RS15565;Dbxref=GenBank:WP_032280958.1;Name=WP_032280958.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416194.1;locus_tag=AC00_RS15565;product=cysteine desulfuration protein SufE;protein_id=WP_032280958.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 52367 53587 . - . ID=gene-AC00_RS15560;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=AC00_RS15560;old_locus_tag=AC00_1836 NZ_JJLU01000065.1 Protein Homology CDS 52367 53587 . - 0 ID=cds-WP_000144575.1;Parent=gene-AC00_RS15560;Dbxref=GenBank:WP_000144575.1;Name=WP_000144575.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=AC00_RS15560;product=cysteine desulfurase SufS;protein_id=WP_000144575.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 53584 54855 . - . ID=gene-AC00_RS15555;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AC00_RS15555;old_locus_tag=AC00_1837 NZ_JJLU01000065.1 Protein Homology CDS 53584 54855 . - 0 ID=cds-WP_001461007.1;Parent=gene-AC00_RS15555;Dbxref=GenBank:WP_001461007.1;Name=WP_001461007.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707580.1;locus_tag=AC00_RS15555;product=Fe-S cluster assembly protein SufD;protein_id=WP_001461007.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 54830 55576 . - . ID=gene-AC00_RS15550;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AC00_RS15550;old_locus_tag=AC00_1838 NZ_JJLU01000065.1 Protein Homology CDS 54830 55576 . - 0 ID=cds-WP_032280961.1;Parent=gene-AC00_RS15550;Dbxref=GenBank:WP_032280961.1;Name=WP_032280961.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=AC00_RS15550;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_032280961.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 55586 57073 . - . ID=gene-AC00_RS15545;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AC00_RS15545;old_locus_tag=AC00_1839 NZ_JJLU01000065.1 Protein Homology CDS 55586 57073 . - 0 ID=cds-WP_023308023.1;Parent=gene-AC00_RS15545;Dbxref=GenBank:WP_023308023.1;Name=WP_023308023.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=AC00_RS15545;product=Fe-S cluster assembly protein SufB;protein_id=WP_023308023.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 57082 57450 . - . ID=gene-AC00_RS15540;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AC00_RS15540;old_locus_tag=AC00_1840 NZ_JJLU01000065.1 Protein Homology CDS 57082 57450 . - 0 ID=cds-WP_000367171.1;Parent=gene-AC00_RS15540;Dbxref=GenBank:WP_000367171.1;Name=WP_000367171.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310418.1;locus_tag=AC00_RS15540;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_000367171.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 57999 58187 . - . ID=gene-AC00_RS15535;Name=ydiH;gbkey=Gene;gene=ydiH;gene_biotype=protein_coding;locus_tag=AC00_RS15535;old_locus_tag=AC00_1841 NZ_JJLU01000065.1 Protein Homology CDS 57999 58187 . - 0 ID=cds-WP_001296104.1;Parent=gene-AC00_RS15535;Dbxref=GenBank:WP_001296104.1;Name=WP_001296104.1;gbkey=CDS;gene=ydiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416200.2;locus_tag=AC00_RS15535;product=YdiH family protein;protein_id=WP_001296104.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 58287 58697 . - . ID=gene-AC00_RS15530;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=AC00_RS15530;old_locus_tag=AC00_1842 NZ_JJLU01000065.1 Protein Homology CDS 58287 58697 . - 0 ID=cds-WP_000637986.1;Parent=gene-AC00_RS15530;Dbxref=GenBank:WP_000637986.1;Name=WP_000637986.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416201.1;locus_tag=AC00_RS15530;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_000637986.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 58694 61750 . - . ID=gene-AC00_RS15525;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=AC00_RS15525;old_locus_tag=AC00_1843 NZ_JJLU01000065.1 Protein Homology CDS 58694 61750 . - 0 ID=cds-WP_032280964.1;Parent=gene-AC00_RS15525;Dbxref=GenBank:WP_032280964.1;Name=WP_032280964.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416202.1;locus_tag=AC00_RS15525;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_032280964.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 62139 63251 . + . ID=gene-AC00_RS15520;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=AC00_RS15520;old_locus_tag=AC00_1844 NZ_JJLU01000065.1 Protein Homology CDS 62139 63251 . + 0 ID=cds-WP_000248636.1;Parent=gene-AC00_RS15520;Dbxref=GenBank:WP_000248636.1;Name=WP_000248636.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416203.1;locus_tag=AC00_RS15520;product=AI-2E family transporter YdiK;protein_id=WP_000248636.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 63437 63544 . + . ID=gene-AC00_RS26765;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=AC00_RS26765 NZ_JJLU01000065.1 cmsearch antisense_RNA 63437 63544 . + . ID=rna-AC00_RS26765;Parent=gene-AC00_RS26765;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26765;product=antisense sRNA RprA NZ_JJLU01000065.1 cmsearch exon 63437 63544 . + . ID=exon-AC00_RS26765-1;Parent=rna-AC00_RS26765;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26765;product=antisense sRNA RprA NZ_JJLU01000065.1 RefSeq gene 63680 64036 . + . ID=gene-AC00_RS15515;Name=ydiL;gbkey=Gene;gene=ydiL;gene_biotype=protein_coding;locus_tag=AC00_RS15515;old_locus_tag=AC00_1845 NZ_JJLU01000065.1 Protein Homology CDS 63680 64036 . + 0 ID=cds-WP_001310864.1;Parent=gene-AC00_RS15515;Dbxref=GenBank:WP_001310864.1;Name=WP_001310864.1;gbkey=CDS;gene=ydiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416204.2;locus_tag=AC00_RS15515;product=YdiL family protein;protein_id=WP_001310864.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 64136 65350 . + . ID=gene-AC00_RS15510;Name=ydiM;gbkey=Gene;gene=ydiM;gene_biotype=protein_coding;locus_tag=AC00_RS15510;old_locus_tag=AC00_1846 NZ_JJLU01000065.1 Protein Homology CDS 64136 65350 . + 0 ID=cds-WP_000795599.1;Parent=gene-AC00_RS15510;Dbxref=GenBank:WP_000795599.1;Name=WP_000795599.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiM;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310424.1;locus_tag=AC00_RS15510;product=MFS transporter;protein_id=WP_000795599.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 65577 66842 . + . ID=gene-AC00_RS15505;Name=ydiN;gbkey=Gene;gene=ydiN;gene_biotype=protein_coding;locus_tag=AC00_RS15505;old_locus_tag=AC00_1847 NZ_JJLU01000065.1 Protein Homology CDS 65577 66842 . + 0 ID=cds-WP_032280965.1;Parent=gene-AC00_RS15505;Dbxref=GenBank:WP_032280965.1;Name=WP_032280965.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydiN;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310425.2;locus_tag=AC00_RS15505;product=MFS transporter;protein_id=WP_032280965.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 66854 67720 . + . ID=gene-AC00_RS15500;Name=ydiB;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=AC00_RS15500;old_locus_tag=AC00_1848 NZ_JJLU01000065.1 Protein Homology CDS 66854 67720 . + 0 ID=cds-WP_032280966.1;Parent=gene-AC00_RS15500;Dbxref=GenBank:WP_032280966.1;Name=WP_032280966.1;gbkey=CDS;gene=ydiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416207.1;locus_tag=AC00_RS15500;product=quinate/shikimate dehydrogenase;protein_id=WP_032280966.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 67751 68509 . + . ID=gene-AC00_RS15495;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=AC00_RS15495;old_locus_tag=AC00_1849 NZ_JJLU01000065.1 Protein Homology CDS 67751 68509 . + 0 ID=cds-WP_000860162.1;Parent=gene-AC00_RS15495;Dbxref=GenBank:WP_000860162.1;Name=WP_000860162.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707592.1;locus_tag=AC00_RS15495;product=type I 3-dehydroquinate dehydratase;protein_id=WP_000860162.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 68655 70250 . + . ID=gene-AC00_RS15490;Name=ydiF;gbkey=Gene;gene=ydiF;gene_biotype=protein_coding;locus_tag=AC00_RS15490;old_locus_tag=AC00_1850 NZ_JJLU01000065.1 Protein Homology CDS 68655 70250 . + 0 ID=cds-WP_032280967.1;Parent=gene-AC00_RS15490;Dbxref=GenBank:WP_032280967.1;Name=WP_032280967.1;gbkey=CDS;gene=ydiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416209.1;locus_tag=AC00_RS15490;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_032280967.1;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 70264 71415 . + . ID=gene-AC00_RS15485;Name=ydiO;gbkey=Gene;gene=ydiO;gene_biotype=protein_coding;locus_tag=AC00_RS15485;old_locus_tag=AC00_1851 NZ_JJLU01000065.1 Protein Homology CDS 70264 71415 . + 0 ID=cds-WP_000347836.1;Parent=gene-AC00_RS15485;Dbxref=GenBank:WP_000347836.1;Name=WP_000347836.1;gbkey=CDS;gene=ydiO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310429.2;locus_tag=AC00_RS15485;product=acyl-CoA dehydrogenase;protein_id=WP_000347836.1;transl_table=11 NZ_JJLU01000065.1 RefSeq pseudogene 71458 71667 . - . ID=gene-AC00_RS27610;Name=AC00_RS27610;end_range=71667,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27610;old_locus_tag=AC00_1852;partial=true;pseudo=true NZ_JJLU01000065.1 Protein Homology CDS 71458 71667 . - 0 ID=cds-AC00_RS27610;Parent=gene-AC00_RS27610;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=71667,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310430.1;locus_tag=AC00_RS27610;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000065.1 RefSeq gene 71723 71981 . + . ID=gene-AC00_RS27615;Name=AC00_RS27615;end_range=71981,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27615;old_locus_tag=AC00_1853;partial=true NZ_JJLU01000065.1 Protein Homology CDS 71723 71981 . + 0 ID=cds-WP_001483558.1;Parent=gene-AC00_RS27615;Dbxref=GenBank:WP_001483558.1;Name=WP_001483558.1;end_range=71981,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27615;partial=true;product=IS1-like element transposase;protein_id=WP_001483558.1;transl_table=11 ##sequence-region NZ_JJLU01000066.1 1 179444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000066.1 RefSeq region 1 179444 . + . ID=NZ_JJLU01000066.1:1..179444;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000066.1 RefSeq pseudogene 1 288 . + . ID=gene-AC00_RS15480;Name=AC00_RS15480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS15480;old_locus_tag=AC00_1854;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000066.1 Protein Homology CDS 1 288 . + 0 ID=cds-AC00_RS15480;Parent=gene-AC00_RS15480;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS15480;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000066.1 RefSeq pseudogene 304 684 . + . ID=gene-AC00_RS15475;Name=AC00_RS15475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS15475;old_locus_tag=AC00_1855;partial=true;pseudo=true;start_range=.,304 NZ_JJLU01000066.1 Protein Homology CDS 304 684 . + 0 ID=cds-AC00_RS15475;Parent=gene-AC00_RS15475;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310435.2;locus_tag=AC00_RS15475;partial=true;product=AMP-binding enzyme;pseudo=true;start_range=.,304;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 741 3119 . - . ID=gene-AC00_RS15470;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=AC00_RS15470;old_locus_tag=AC00_1856 NZ_JJLU01000066.1 Protein Homology CDS 741 3119 . - 0 ID=cds-WP_032280970.1;Parent=gene-AC00_RS15470;Dbxref=GenBank:WP_032280970.1;Name=WP_032280970.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=AC00_RS15470;product=phosphoenolpyruvate synthase;protein_id=WP_032280970.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 3452 4285 . + . ID=gene-AC00_RS15460;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=AC00_RS15460;old_locus_tag=AC00_1858 NZ_JJLU01000066.1 Protein Homology CDS 3452 4285 . + 0 ID=cds-WP_000368046.1;Parent=gene-AC00_RS15460;Dbxref=GenBank:WP_000368046.1;Name=WP_000368046.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=AC00_RS15460;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_000368046.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 4442 5488 . + . ID=gene-AC00_RS15455;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AC00_RS15455;old_locus_tag=AC00_1859 NZ_JJLU01000066.1 Protein Homology CDS 4442 5488 . + 0 ID=cds-WP_001082229.1;Parent=gene-AC00_RS15455;Dbxref=GenBank:WP_001082229.1;Name=WP_001082229.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416219.1;locus_tag=AC00_RS15455;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_001082229.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 5620 5811 . + . ID=gene-AC00_RS15450;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=AC00_RS15450;old_locus_tag=AC00_1860 NZ_JJLU01000066.1 Protein Homology CDS 5620 5811 . + 0 ID=cds-WP_032280972.1;Parent=gene-AC00_RS15450;Dbxref=GenBank:WP_032280972.1;Name=WP_032280972.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310439.1;locus_tag=AC00_RS15450;product=hemin uptake protein HemP;protein_id=WP_032280972.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 5815 7251 . - . ID=gene-AC00_RS15445;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=AC00_RS15445;old_locus_tag=AC00_1861 NZ_JJLU01000066.1 Protein Homology CDS 5815 7251 . - 0 ID=cds-WP_032280973.1;Parent=gene-AC00_RS15445;Dbxref=GenBank:WP_032280973.1;Name=WP_032280973.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707408.1;locus_tag=AC00_RS15445;product=protein adenylyltransferase SelO;protein_id=WP_032280973.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 7314 8027 . - . ID=gene-AC00_RS15440;Name=ydiV;gbkey=Gene;gene=ydiV;gene_biotype=protein_coding;locus_tag=AC00_RS15440;old_locus_tag=AC00_1862 NZ_JJLU01000066.1 Protein Homology CDS 7314 8027 . - 0 ID=cds-WP_032280974.1;Parent=gene-AC00_RS15440;Dbxref=GenBank:WP_032280974.1;Name=WP_032280974.1;gbkey=CDS;gene=ydiV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416222.1;locus_tag=AC00_RS15440;product=anti-FlhDC factor;protein_id=WP_032280974.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 8274 8738 . - . ID=gene-AC00_RS15435;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=AC00_RS15435;old_locus_tag=AC00_1863 NZ_JJLU01000066.1 Protein Homology CDS 8274 8738 . - 0 ID=cds-WP_001209780.1;Parent=gene-AC00_RS15435;Dbxref=GenBank:WP_001209780.1;Name=WP_001209780.1;gbkey=CDS;gene=nlpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310442.1;locus_tag=AC00_RS15435;product=NlpC/P60 family protein;protein_id=WP_001209780.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 8816 9565 . - . ID=gene-AC00_RS15430;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=AC00_RS15430;old_locus_tag=AC00_1864 NZ_JJLU01000066.1 Protein Homology CDS 8816 9565 . - 0 ID=cds-WP_032280977.1;Parent=gene-AC00_RS15430;Dbxref=GenBank:WP_032280977.1;Name=WP_032280977.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707405.1;locus_tag=AC00_RS15430;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_032280977.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 9565 10116 . - . ID=gene-AC00_RS15425;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=AC00_RS15425;old_locus_tag=AC00_1865 NZ_JJLU01000066.1 Protein Homology CDS 9565 10116 . - 0 ID=cds-WP_001154187.1;Parent=gene-AC00_RS15425;Dbxref=GenBank:WP_001154187.1;Name=WP_001154187.1;gbkey=CDS;gene=btuE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310444.1;locus_tag=AC00_RS15425;product=bifunctional thioredoxin/glutathione peroxidase;protein_id=WP_001154187.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 10179 11159 . - . ID=gene-AC00_RS15420;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=AC00_RS15420;old_locus_tag=AC00_1866 NZ_JJLU01000066.1 Protein Homology CDS 10179 11159 . - 0 ID=cds-WP_000956515.1;Parent=gene-AC00_RS15420;Dbxref=GenBank:WP_000956515.1;Name=WP_000956515.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=AC00_RS15420;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_000956515.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 11260 11559 . - . ID=gene-AC00_RS15415;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=AC00_RS15415;old_locus_tag=AC00_1867 NZ_JJLU01000066.1 Protein Homology CDS 11260 11559 . - 0 ID=cds-WP_001229265.1;Parent=gene-AC00_RS15415;Dbxref=GenBank:WP_001229265.1;Name=WP_001229265.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=AC00_RS15415;product=integration host factor subunit alpha;protein_id=WP_001229265.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 11564 13951 . - . ID=gene-AC00_RS15410;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AC00_RS15410;old_locus_tag=AC00_1868 NZ_JJLU01000066.1 Protein Homology CDS 11564 13951 . - 0 ID=cds-WP_000672328.1;Parent=gene-AC00_RS15410;Dbxref=GenBank:WP_000672328.1;Name=WP_000672328.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=AC00_RS15410;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_000672328.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 13966 14949 . - . ID=gene-AC00_RS15405;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AC00_RS15405;old_locus_tag=AC00_1869 NZ_JJLU01000066.1 Protein Homology CDS 13966 14949 . - 0 ID=cds-WP_000018588.1;Parent=gene-AC00_RS15405;Dbxref=GenBank:WP_000018588.1;Name=WP_000018588.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=AC00_RS15405;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_000018588.1;transl_table=11 NZ_JJLU01000066.1 cmsearch sequence_feature 15158 15282 . - . ID=id-NZ_JJLU01000066.1:15158..15282;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLU01000066.1 RefSeq gene 15232 15276 . - . ID=gene-AC00_RS30315;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=AC00_RS30315 NZ_JJLU01000066.1 Protein Homology CDS 15232 15276 . - 0 ID=cds-WP_001386830.1;Parent=gene-AC00_RS30315;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=AC00_RS30315;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 15399 15755 . - . ID=gene-AC00_RS15400;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AC00_RS15400;old_locus_tag=AC00_1870 NZ_JJLU01000066.1 Protein Homology CDS 15399 15755 . - 0 ID=cds-WP_000124850.1;Parent=gene-AC00_RS15400;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=AC00_RS15400;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 15808 16005 . - . ID=gene-AC00_RS15395;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AC00_RS15395;old_locus_tag=AC00_1871 NZ_JJLU01000066.1 Protein Homology CDS 15808 16005 . - 0 ID=cds-WP_001124225.1;Parent=gene-AC00_RS15395;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=AC00_RS15395;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 16102 16644 . - . ID=gene-AC00_RS0124675;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AC00_RS0124675 NZ_JJLU01000066.1 Protein Homology CDS 16102 16644 . - 0 ID=cds-WP_001700733.1;Parent=gene-AC00_RS0124675;Dbxref=GenBank:WP_001700733.1;Name=WP_001700733.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=AC00_RS0124675;product=translation initiation factor IF-3;protein_id=WP_001700733.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 16648 18576 . - . ID=gene-AC00_RS15390;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AC00_RS15390;old_locus_tag=AC00_1873 NZ_JJLU01000066.1 Protein Homology CDS 16648 18576 . - 0 ID=cds-WP_001144199.1;Parent=gene-AC00_RS15390;Dbxref=GenBank:WP_001144199.1;Name=WP_001144199.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=AC00_RS15390;product=threonine--tRNA ligase;protein_id=WP_001144199.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 19099 20997 . + . ID=gene-AC00_RS15385;Name=espL1;gbkey=Gene;gene=espL1;gene_biotype=protein_coding;locus_tag=AC00_RS15385;old_locus_tag=AC00_1874 NZ_JJLU01000066.1 Protein Homology CDS 19099 20997 . + 0 ID=cds-WP_032280980.1;Parent=gene-AC00_RS15385;Dbxref=GenBank:WP_032280980.1;Name=WP_032280980.1;gbkey=CDS;gene=espL1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310454.1;locus_tag=AC00_RS15385;product=type III secretion system effector EspL1;protein_id=WP_032280980.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 21172 21279 . + . ID=gene-AC00_RS15380;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=AC00_RS15380;old_locus_tag=AC00_1875 NZ_JJLU01000066.1 Protein Homology CDS 21172 21279 . + 0 ID=cds-WP_001142445.1;Parent=gene-AC00_RS15380;Dbxref=GenBank:WP_001142445.1;Name=WP_001142445.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=AC00_RS15380;product=small membrane protein YniD;protein_id=WP_001142445.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 21332 22090 . - . ID=gene-AC00_RS15375;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=AC00_RS15375;old_locus_tag=AC00_1876 NZ_JJLU01000066.1 Protein Homology CDS 21332 22090 . - 0 ID=cds-WP_000771396.1;Parent=gene-AC00_RS15375;Dbxref=GenBank:WP_000771396.1;Name=WP_000771396.1;gbkey=CDS;gene=ydiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=AC00_RS15375;product=DUF481 domain-containing protein;protein_id=WP_000771396.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 22377 23306 . + . ID=gene-AC00_RS15370;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=AC00_RS15370;old_locus_tag=AC00_1877 NZ_JJLU01000066.1 Protein Homology CDS 22377 23306 . + 0 ID=cds-WP_000251735.1;Parent=gene-AC00_RS15370;Dbxref=GenBank:WP_000251735.1;Name=WP_000251735.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707391.2;locus_tag=AC00_RS15370;product=6-phosphofructokinase II;protein_id=WP_000251735.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 23407 23697 . + . ID=gene-AC00_RS15365;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AC00_RS15365;old_locus_tag=AC00_1878 NZ_JJLU01000066.1 Protein Homology CDS 23407 23697 . + 0 ID=cds-WP_000146159.1;Parent=gene-AC00_RS15365;Dbxref=GenBank:WP_000146159.1;Name=WP_000146159.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310457.1;locus_tag=AC00_RS15365;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000146159.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 23803 24663 . + . ID=gene-AC00_RS15360;Name=yniA;gbkey=Gene;gene=yniA;gene_biotype=protein_coding;locus_tag=AC00_RS15360;old_locus_tag=AC00_1879 NZ_JJLU01000066.1 Protein Homology CDS 23803 24663 . + 0 ID=cds-WP_000267650.1;Parent=gene-AC00_RS15360;Dbxref=GenBank:WP_000267650.1;Name=WP_000267650.1;gbkey=CDS;gene=yniA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416239.1;locus_tag=AC00_RS15360;product=fructosamine kinase family protein;protein_id=WP_000267650.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 24704 25240 . - . ID=gene-AC00_RS15355;Name=yniB;gbkey=Gene;gene=yniB;gene_biotype=protein_coding;locus_tag=AC00_RS15355;old_locus_tag=AC00_1880 NZ_JJLU01000066.1 Protein Homology CDS 24704 25240 . - 0 ID=cds-WP_000222172.1;Parent=gene-AC00_RS15355;Dbxref=GenBank:WP_000222172.1;Name=WP_000222172.1;gbkey=CDS;gene=yniB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416240.1;locus_tag=AC00_RS15355;product=YniB family protein;protein_id=WP_000222172.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 25387 26055 . + . ID=gene-AC00_RS15350;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=AC00_RS15350;old_locus_tag=AC00_1881 NZ_JJLU01000066.1 Protein Homology CDS 25387 26055 . + 0 ID=cds-WP_000106834.1;Parent=gene-AC00_RS15350;Dbxref=GenBank:WP_000106834.1;Name=WP_000106834.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310460.1;locus_tag=AC00_RS15350;product=hexitol phosphatase HxpB;protein_id=WP_000106834.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 26218 26808 . + . ID=gene-AC00_RS15345;Name=ydjM;gbkey=Gene;gene=ydjM;gene_biotype=protein_coding;locus_tag=AC00_RS15345;old_locus_tag=AC00_1882 NZ_JJLU01000066.1 Protein Homology CDS 26218 26808 . + 0 ID=cds-WP_001295408.1;Parent=gene-AC00_RS15345;Dbxref=GenBank:WP_001295408.1;Name=WP_001295408.1;gbkey=CDS;gene=ydjM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310461.2;locus_tag=AC00_RS15345;product=metal-dependent hydrolase;protein_id=WP_001295408.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 26941 28332 . + . ID=gene-AC00_RS15340;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=AC00_RS15340;old_locus_tag=AC00_1883 NZ_JJLU01000066.1 Protein Homology CDS 26941 28332 . + 0 ID=cds-WP_001010696.1;Parent=gene-AC00_RS15340;Dbxref=GenBank:WP_001010696.1;Name=WP_001010696.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416243.1;locus_tag=AC00_RS15340;product=cystine/sulfocysteine:cation symporter;protein_id=WP_001010696.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 28336 29139 . - . ID=gene-AC00_RS15335;Name=ydjO;gbkey=Gene;gene=ydjO;gene_biotype=protein_coding;locus_tag=AC00_RS15335;old_locus_tag=AC00_1884 NZ_JJLU01000066.1 Protein Homology CDS 28336 29139 . - 0 ID=cds-WP_032280982.1;Parent=gene-AC00_RS15335;Dbxref=GenBank:WP_032280982.1;Name=WP_032280982.1;gbkey=CDS;gene=ydjO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416244.2;locus_tag=AC00_RS15335;product=protein YdjO;protein_id=WP_032280982.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 29428 29691 . - . ID=gene-AC00_RS15330;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=AC00_RS15330;old_locus_tag=AC00_1885 NZ_JJLU01000066.1 Protein Homology CDS 29428 29691 . - 0 ID=cds-WP_001241561.1;Parent=gene-AC00_RS15330;Dbxref=GenBank:WP_001241561.1;Name=WP_001241561.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310464.1;locus_tag=AC00_RS15330;product=cell division activator CedA;protein_id=WP_001241561.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 29874 32135 . + . ID=gene-AC00_RS15325;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=AC00_RS15325;old_locus_tag=AC00_1886 NZ_JJLU01000066.1 Protein Homology CDS 29874 32135 . + 0 ID=cds-WP_032280983.1;Parent=gene-AC00_RS15325;Dbxref=GenBank:WP_032280983.1;Name=WP_032280983.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310465.1;locus_tag=AC00_RS15325;product=catalase HPII;protein_id=WP_032280983.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 32182 32940 . - . ID=gene-AC00_RS15320;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=AC00_RS15320;old_locus_tag=AC00_1887 NZ_JJLU01000066.1 Protein Homology CDS 32182 32940 . - 0 ID=cds-WP_032280984.1;Parent=gene-AC00_RS15320;Dbxref=GenBank:WP_032280984.1;Name=WP_032280984.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310466.1;locus_tag=AC00_RS15320;product=chitin disaccharide deacetylase;protein_id=WP_032280984.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 32953 34305 . - . ID=gene-AC00_RS15315;Name=celF;gbkey=Gene;gene=celF;gene_biotype=protein_coding;gene_synonym=chbF;locus_tag=AC00_RS15315;old_locus_tag=AC00_1888 NZ_JJLU01000066.1 Protein Homology CDS 32953 34305 . - 0 ID=cds-WP_032280985.1;Parent=gene-AC00_RS15315;Dbxref=GenBank:WP_032280985.1;Name=WP_032280985.1;gbkey=CDS;gene=celF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310467.1;locus_tag=AC00_RS15315;product=6-phospho-beta-glucosidase;protein_id=WP_032280985.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 34409 35251 . - . ID=gene-AC00_RS15310;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=AC00_RS15310;old_locus_tag=AC00_1889 NZ_JJLU01000066.1 Protein Homology CDS 34409 35251 . - 0 ID=cds-WP_000983653.1;Parent=gene-AC00_RS15310;Dbxref=GenBank:WP_000983653.1;Name=WP_000983653.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416249.1;locus_tag=AC00_RS15310;product=transcriptional regulator ChbR;protein_id=WP_000983653.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 35259 35609 . - . ID=gene-AC00_RS15305;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=AC00_RS15305;old_locus_tag=AC00_1890 NZ_JJLU01000066.1 Protein Homology CDS 35259 35609 . - 0 ID=cds-WP_000968919.1;Parent=gene-AC00_RS15305;Dbxref=GenBank:WP_000968919.1;Name=WP_000968919.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310469.1;locus_tag=AC00_RS15305;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_000968919.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 35660 37018 . - . ID=gene-AC00_RS15300;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=AC00_RS15300;old_locus_tag=AC00_1891 NZ_JJLU01000066.1 Protein Homology CDS 35660 37018 . - 0 ID=cds-WP_000073041.1;Parent=gene-AC00_RS15300;Dbxref=GenBank:WP_000073041.1;Name=WP_000073041.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=AC00_RS15300;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_000073041.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 37103 37423 . - . ID=gene-AC00_RS15295;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=AC00_RS15295;old_locus_tag=AC00_1892 NZ_JJLU01000066.1 Protein Homology CDS 37103 37423 . - 0 ID=cds-WP_000412169.1;Parent=gene-AC00_RS15295;Dbxref=GenBank:WP_000412169.1;Name=WP_000412169.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310471.1;locus_tag=AC00_RS15295;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_000412169.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 37723 38061 . - . ID=gene-AC00_RS15290;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=AC00_RS15290;old_locus_tag=AC00_1893 NZ_JJLU01000066.1 Protein Homology CDS 37723 38061 . - 0 ID=cds-WP_032280986.1;Parent=gene-AC00_RS15290;Dbxref=GenBank:WP_032280986.1;Name=WP_032280986.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310472.1;locus_tag=AC00_RS15290;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_032280986.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 38263 39090 . + . ID=gene-AC00_RS15285;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AC00_RS15285;old_locus_tag=AC00_1894 NZ_JJLU01000066.1 Protein Homology CDS 38263 39090 . + 0 ID=cds-WP_000175052.1;Parent=gene-AC00_RS15285;Dbxref=GenBank:WP_000175052.1;Name=WP_000175052.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310473.1;locus_tag=AC00_RS15285;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_000175052.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 39320 40207 . + . ID=gene-AC00_RS15280;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=AC00_RS15280;old_locus_tag=AC00_1895 NZ_JJLU01000066.1 Protein Homology CDS 39320 40207 . + 0 ID=cds-WP_032280987.1;Parent=gene-AC00_RS15280;Dbxref=GenBank:WP_032280987.1;Name=WP_032280987.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416255.1;locus_tag=AC00_RS15280;product=excinuclease Cho;protein_id=WP_032280987.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 40167 40742 . - . ID=gene-AC00_RS15275;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=AC00_RS15275;old_locus_tag=AC00_1896 NZ_JJLU01000066.1 Protein Homology CDS 40167 40742 . - 0 ID=cds-WP_000455601.1;Parent=gene-AC00_RS15275;Dbxref=GenBank:WP_000455601.1;Name=WP_000455601.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310475.2;locus_tag=AC00_RS15275;product=environmental stress-induced protein Ves;protein_id=WP_000455601.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 40945 41430 . - . ID=gene-AC00_RS15270;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=AC00_RS15270;old_locus_tag=AC00_1897 NZ_JJLU01000066.1 Protein Homology CDS 40945 41430 . - 0 ID=cds-WP_001228981.1;Parent=gene-AC00_RS15270;Dbxref=GenBank:WP_001228981.1;Name=WP_001228981.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310476.1;locus_tag=AC00_RS15270;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_001228981.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 41760 42728 . - . ID=gene-AC00_RS15265;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=AC00_RS15265;old_locus_tag=AC00_1898 NZ_JJLU01000066.1 Protein Homology CDS 41760 42728 . - 0 ID=cds-WP_032280989.1;Parent=gene-AC00_RS15265;Dbxref=GenBank:WP_032280989.1;Name=WP_032280989.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310477.1;locus_tag=AC00_RS15265;product=succinylglutamate desuccinylase;protein_id=WP_032280989.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 42721 44064 . - . ID=gene-AC00_RS15260;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=AC00_RS15260;old_locus_tag=AC00_1899 NZ_JJLU01000066.1 Protein Homology CDS 42721 44064 . - 0 ID=cds-WP_032280991.1;Parent=gene-AC00_RS15260;Dbxref=GenBank:WP_032280991.1;Name=WP_032280991.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310478.1;locus_tag=AC00_RS15260;product=N-succinylarginine dihydrolase;protein_id=WP_032280991.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 44061 45539 . - . ID=gene-AC00_RS15255;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=AC00_RS15255;old_locus_tag=AC00_1900 NZ_JJLU01000066.1 Protein Homology CDS 44061 45539 . - 0 ID=cds-WP_032280992.1;Parent=gene-AC00_RS15255;Dbxref=GenBank:WP_032280992.1;Name=WP_032280992.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416260.1;locus_tag=AC00_RS15255;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_032280992.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 45536 46570 . - . ID=gene-AC00_RS15250;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=AC00_RS15250;old_locus_tag=AC00_1901 NZ_JJLU01000066.1 Protein Homology CDS 45536 46570 . - 0 ID=cds-WP_000989419.1;Parent=gene-AC00_RS15250;Dbxref=GenBank:WP_000989419.1;Name=WP_000989419.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=AC00_RS15250;product=arginine N-succinyltransferase;protein_id=WP_000989419.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 46567 47787 . - . ID=gene-AC00_RS15245;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=AC00_RS15245;old_locus_tag=AC00_1902 NZ_JJLU01000066.1 Protein Homology CDS 46567 47787 . - 0 ID=cds-WP_000082006.1;Parent=gene-AC00_RS15245;Dbxref=GenBank:WP_000082006.1;Name=WP_000082006.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310481.1;locus_tag=AC00_RS15245;product=succinylornithine/acetylornithine transaminase;protein_id=WP_000082006.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 48233 49039 . + . ID=gene-AC00_RS15240;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=AC00_RS15240;old_locus_tag=AC00_1904 NZ_JJLU01000066.1 Protein Homology CDS 48233 49039 . + 0 ID=cds-WP_000673927.1;Parent=gene-AC00_RS15240;Dbxref=GenBank:WP_000673927.1;Name=WP_000673927.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310482.1;locus_tag=AC00_RS15240;product=exodeoxyribonuclease III;protein_id=WP_000673927.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 49206 49916 . + . ID=gene-AC00_RS15235;Name=ydjX;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=AC00_RS15235;old_locus_tag=AC00_1905 NZ_JJLU01000066.1 Protein Homology CDS 49206 49916 . + 0 ID=cds-WP_001307832.1;Parent=gene-AC00_RS15235;Dbxref=GenBank:WP_001307832.1;Name=WP_001307832.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310483.2;locus_tag=AC00_RS15235;product=TVP38/TMEM64 family protein;protein_id=WP_001307832.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 49921 50598 . + . ID=gene-AC00_RS15230;Name=ydjY;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=AC00_RS15230;old_locus_tag=AC00_1906 NZ_JJLU01000066.1 Protein Homology CDS 49921 50598 . + 0 ID=cds-WP_032280994.1;Parent=gene-AC00_RS15230;Dbxref=GenBank:WP_032280994.1;Name=WP_032280994.1;gbkey=CDS;gene=ydjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416265.4;locus_tag=AC00_RS15230;product=lipoprotein YdjY;protein_id=WP_032280994.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 50614 51321 . + . ID=gene-AC00_RS15225;Name=ydjZ;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=AC00_RS15225;old_locus_tag=AC00_1907 NZ_JJLU01000066.1 Protein Homology CDS 50614 51321 . + 0 ID=cds-WP_032280996.1;Parent=gene-AC00_RS15225;Dbxref=GenBank:WP_032280996.1;Name=WP_032280996.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ydjZ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310485.1;locus_tag=AC00_RS15225;product=TVP38/TMEM64 family protein;protein_id=WP_032280996.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 51321 51869 . + . ID=gene-AC00_RS15220;Name=ynjA;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=AC00_RS15220;old_locus_tag=AC00_1908 NZ_JJLU01000066.1 Protein Homology CDS 51321 51869 . + 0 ID=cds-WP_032280997.1;Parent=gene-AC00_RS15220;Dbxref=GenBank:WP_032280997.1;Name=WP_032280997.1;Ontology_term=GO:0051920;gbkey=CDS;gene=ynjA;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416267.1;locus_tag=AC00_RS15220;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_032280997.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 51879 53045 . + . ID=gene-AC00_RS15215;Name=ynjB;gbkey=Gene;gene=ynjB;gene_biotype=protein_coding;locus_tag=AC00_RS15215;old_locus_tag=AC00_1909 NZ_JJLU01000066.1 Protein Homology CDS 51879 53045 . + 0 ID=cds-WP_021577572.1;Parent=gene-AC00_RS15215;Dbxref=GenBank:WP_021577572.1;Name=WP_021577572.1;gbkey=CDS;gene=ynjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416268.2;locus_tag=AC00_RS15215;product=ABC transporter substrate-binding protein;protein_id=WP_021577572.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 53018 54553 . + . ID=gene-AC00_RS15210;Name=ynjC;gbkey=Gene;gene=ynjC;gene_biotype=protein_coding;locus_tag=AC00_RS15210;old_locus_tag=AC00_1910 NZ_JJLU01000066.1 Protein Homology CDS 53018 54553 . + 0 ID=cds-WP_032280998.1;Parent=gene-AC00_RS15210;Dbxref=GenBank:WP_032280998.1;Name=WP_032280998.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ynjC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310488.2;locus_tag=AC00_RS15210;product=ABC transporter permease subunit;protein_id=WP_032280998.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 54553 55206 . + . ID=gene-AC00_RS15205;Name=ynjD;gbkey=Gene;gene=ynjD;gene_biotype=protein_coding;locus_tag=AC00_RS15205;old_locus_tag=AC00_1911 NZ_JJLU01000066.1 Protein Homology CDS 54553 55206 . + 0 ID=cds-WP_032280999.1;Parent=gene-AC00_RS15205;Dbxref=GenBank:WP_032280999.1;Name=WP_032280999.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ynjD;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310489.1;locus_tag=AC00_RS15205;product=ATP-binding cassette domain-containing protein;protein_id=WP_032280999.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 55273 56580 . + . ID=gene-AC00_RS15200;Name=ynjE;gbkey=Gene;gene=ynjE;gene_biotype=protein_coding;locus_tag=AC00_RS15200;old_locus_tag=AC00_1912 NZ_JJLU01000066.1 Protein Homology CDS 55273 56580 . + 0 ID=cds-WP_032281000.1;Parent=gene-AC00_RS15200;Dbxref=GenBank:WP_032281000.1;Name=WP_032281000.1;gbkey=CDS;gene=ynjE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310490.2;locus_tag=AC00_RS15200;product=thiosulfate sulfurtransferase YnjE;protein_id=WP_032281000.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 56589 57209 . - . ID=gene-AC00_RS15195;Name=ynjF;gbkey=Gene;gene=ynjF;gene_biotype=protein_coding;locus_tag=AC00_RS15195;old_locus_tag=AC00_1913 NZ_JJLU01000066.1 Protein Homology CDS 56589 57209 . - 0 ID=cds-WP_001371603.1;Parent=gene-AC00_RS15195;Dbxref=GenBank:WP_001371603.1;Name=WP_001371603.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;gene=ynjF;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707357.2;locus_tag=AC00_RS15195;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_001371603.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 57296 57703 . + . ID=gene-AC00_RS15190;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=AC00_RS15190;old_locus_tag=AC00_1914 NZ_JJLU01000066.1 Protein Homology CDS 57296 57703 . + 0 ID=cds-WP_000781877.1;Parent=gene-AC00_RS15190;Dbxref=GenBank:WP_000781877.1;Name=WP_000781877.1;gbkey=CDS;gene=nudG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310492.1;locus_tag=AC00_RS15190;product=CTP pyrophosphohydrolase;protein_id=WP_000781877.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 57669 57941 . - . ID=gene-AC00_RS15185;Name=ynjH;gbkey=Gene;gene=ynjH;gene_biotype=protein_coding;locus_tag=AC00_RS15185;old_locus_tag=AC00_1915 NZ_JJLU01000066.1 Protein Homology CDS 57669 57941 . - 0 ID=cds-WP_000085233.1;Parent=gene-AC00_RS15185;Dbxref=GenBank:WP_000085233.1;Name=WP_000085233.1;gbkey=CDS;gene=ynjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416274.1;locus_tag=AC00_RS15185;product=YnjH family protein;protein_id=WP_000085233.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 58177 59520 . + . ID=gene-AC00_RS15180;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AC00_RS15180;old_locus_tag=AC00_1917 NZ_JJLU01000066.1 Protein Homology CDS 58177 59520 . + 0 ID=cds-WP_000373043.1;Parent=gene-AC00_RS15180;Dbxref=GenBank:WP_000373043.1;Name=WP_000373043.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310494.1;locus_tag=AC00_RS15180;product=NADP-specific glutamate dehydrogenase;protein_id=WP_000373043.1;transl_table=11 NZ_JJLU01000066.1 RefSeq pseudogene 59637 60676 . - . ID=gene-AC00_RS0124685;Name=ynjI;gbkey=Gene;gene=ynjI;gene_biotype=pseudogene;locus_tag=AC00_RS0124685;old_locus_tag=AC00_1918;pseudo=true NZ_JJLU01000066.1 Protein Homology CDS 59637 60676 . - 0 ID=cds-AC00_RS0124685;Parent=gene-AC00_RS0124685;Note=frameshifted;gbkey=CDS;gene=ynjI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416276.4;locus_tag=AC00_RS0124685;product=DUF1266 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 60804 62765 . - . ID=gene-AC00_RS15175;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=AC00_RS15175;old_locus_tag=AC00_1919 NZ_JJLU01000066.1 Protein Homology CDS 60804 62765 . - 0 ID=cds-WP_032281001.1;Parent=gene-AC00_RS15175;Dbxref=GenBank:WP_032281001.1;Name=WP_032281001.1;gbkey=CDS;gene=topB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310496.1;locus_tag=AC00_RS15175;product=DNA topoisomerase III;protein_id=WP_032281001.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 62770 63813 . - . ID=gene-AC00_RS15170;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=AC00_RS15170;old_locus_tag=AC00_1920 NZ_JJLU01000066.1 Protein Homology CDS 62770 63813 . - 0 ID=cds-WP_001298241.1;Parent=gene-AC00_RS15170;Dbxref=GenBank:WP_001298241.1;Name=WP_001298241.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310497.1;locus_tag=AC00_RS15170;product=selenide%2C water dikinase SelD;protein_id=WP_001298241.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 63930 64481 . - . ID=gene-AC00_RS15165;Name=ydjA;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=AC00_RS15165;old_locus_tag=AC00_1921 NZ_JJLU01000066.1 Protein Homology CDS 63930 64481 . - 0 ID=cds-WP_000339283.1;Parent=gene-AC00_RS15165;Dbxref=GenBank:WP_000339283.1;Name=WP_000339283.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydjA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310498.1;locus_tag=AC00_RS15165;product=NAD(P)H nitroreductase;protein_id=WP_000339283.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 64642 66498 . + . ID=gene-AC00_RS15160;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=AC00_RS15160;old_locus_tag=AC00_1922 NZ_JJLU01000066.1 Protein Homology CDS 64642 66498 . + 0 ID=cds-WP_032281002.1;Parent=gene-AC00_RS15160;Dbxref=GenBank:WP_032281002.1;Name=WP_032281002.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707347.2;locus_tag=AC00_RS15160;product=signal peptide peptidase SppA;protein_id=WP_032281002.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 66614 67324 . + . ID=gene-AC00_RS15155;Name=AC00_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS15155;old_locus_tag=AC00_1923 NZ_JJLU01000066.1 Protein Homology CDS 66614 67324 . + 0 ID=cds-WP_032281004.1;Parent=gene-AC00_RS15155;Dbxref=GenBank:WP_032281004.1;Name=WP_032281004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310500.3;locus_tag=AC00_RS15155;product=SIMPL domain-containing protein;protein_id=WP_032281004.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 67456 68472 . + . ID=gene-AC00_RS15150;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AC00_RS15150;old_locus_tag=AC00_1924 NZ_JJLU01000066.1 Protein Homology CDS 67456 68472 . + 0 ID=cds-WP_001170162.1;Parent=gene-AC00_RS15150;Dbxref=GenBank:WP_001170162.1;Name=WP_001170162.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=AC00_RS15150;product=asparaginase;protein_id=WP_001170162.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 68483 69124 . + . ID=gene-AC00_RS15145;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=AC00_RS15145;old_locus_tag=AC00_1925 NZ_JJLU01000066.1 Protein Homology CDS 68483 69124 . + 0 ID=cds-WP_032281006.1;Parent=gene-AC00_RS15145;Dbxref=GenBank:WP_032281006.1;Name=WP_032281006.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310502.2;locus_tag=AC00_RS15145;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_032281006.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 69217 70575 . - . ID=gene-AC00_RS15140;Name=ydjE;gbkey=Gene;gene=ydjE;gene_biotype=protein_coding;locus_tag=AC00_RS15140;old_locus_tag=AC00_1926 NZ_JJLU01000066.1 Protein Homology CDS 69217 70575 . - 0 ID=cds-WP_000438810.1;Parent=gene-AC00_RS15140;Dbxref=GenBank:WP_000438810.1;Name=WP_000438810.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416283.1;locus_tag=AC00_RS15140;product=MFS transporter;protein_id=WP_000438810.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 70693 71451 . - . ID=gene-AC00_RS15135;Name=ydjF;gbkey=Gene;gene=ydjF;gene_biotype=protein_coding;locus_tag=AC00_RS15135;old_locus_tag=AC00_1927 NZ_JJLU01000066.1 Protein Homology CDS 70693 71451 . - 0 ID=cds-WP_000719088.1;Parent=gene-AC00_RS15135;Dbxref=GenBank:WP_000719088.1;Name=WP_000719088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=ydjF;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310506.1;locus_tag=AC00_RS15135;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_000719088.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 71588 72568 . - . ID=gene-AC00_RS15130;Name=ydjG;gbkey=Gene;gene=ydjG;gene_biotype=protein_coding;locus_tag=AC00_RS15130;old_locus_tag=AC00_1928 NZ_JJLU01000066.1 Protein Homology CDS 71588 72568 . - 0 ID=cds-WP_000723731.1;Parent=gene-AC00_RS15130;Dbxref=GenBank:WP_000723731.1;Name=WP_000723731.1;Ontology_term=GO:0019170;gbkey=CDS;gene=ydjG;go_function=methylglyoxal reductase (NADH) activity|0019170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310507.1;locus_tag=AC00_RS15130;product=NADH-dependent methylglyoxal reductase;protein_id=WP_000723731.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 72578 73525 . - . ID=gene-AC00_RS15125;Name=ydjH;gbkey=Gene;gene=ydjH;gene_biotype=protein_coding;locus_tag=AC00_RS15125;old_locus_tag=AC00_1929 NZ_JJLU01000066.1 Protein Homology CDS 72578 73525 . - 0 ID=cds-WP_021577578.1;Parent=gene-AC00_RS15125;Dbxref=GenBank:WP_021577578.1;Name=WP_021577578.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;gene=ydjH;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416286.4;locus_tag=AC00_RS15125;product=sugar kinase;protein_id=WP_021577578.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 73530 74366 . - . ID=gene-AC00_RS15120;Name=ydjI;gbkey=Gene;gene=ydjI;gene_biotype=protein_coding;locus_tag=AC00_RS15120;old_locus_tag=AC00_1930 NZ_JJLU01000066.1 Protein Homology CDS 73530 74366 . - 0 ID=cds-WP_000878903.1;Parent=gene-AC00_RS15120;Dbxref=GenBank:WP_000878903.1;Name=WP_000878903.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=ydjI;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310509.1;locus_tag=AC00_RS15120;product=ketose-bisphosphate aldolase;protein_id=WP_000878903.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 74387 75430 . - . ID=gene-AC00_RS15115;Name=ydjJ;gbkey=Gene;gene=ydjJ;gene_biotype=protein_coding;locus_tag=AC00_RS15115;old_locus_tag=AC00_1931 NZ_JJLU01000066.1 Protein Homology CDS 74387 75430 . - 0 ID=cds-WP_032281008.1;Parent=gene-AC00_RS15115;Dbxref=GenBank:WP_032281008.1;Name=WP_032281008.1;gbkey=CDS;gene=ydjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416288.1;locus_tag=AC00_RS15115;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_032281008.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 75447 76826 . - . ID=gene-AC00_RS15110;Name=ydjK;gbkey=Gene;gene=ydjK;gene_biotype=protein_coding;locus_tag=AC00_RS15110;old_locus_tag=AC00_1932 NZ_JJLU01000066.1 Protein Homology CDS 75447 76826 . - 0 ID=cds-WP_032281009.1;Parent=gene-AC00_RS15110;Dbxref=GenBank:WP_032281009.1;Name=WP_032281009.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ydjK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416289.1;locus_tag=AC00_RS15110;product=MFS transporter;protein_id=WP_032281009.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 76853 77929 . - . ID=gene-AC00_RS15105;Name=ydjL;gbkey=Gene;gene=ydjL;gene_biotype=protein_coding;locus_tag=AC00_RS15105;old_locus_tag=AC00_1933 NZ_JJLU01000066.1 Protein Homology CDS 76853 77929 . - 0 ID=cds-WP_032288211.1;Parent=gene-AC00_RS15105;Dbxref=GenBank:WP_032288211.1;Name=WP_032288211.1;gbkey=CDS;gene=ydjL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416290.1;locus_tag=AC00_RS15105;product=zinc-binding dehydrogenase;protein_id=WP_032288211.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 78299 78571 . - . ID=gene-AC00_RS15100;Name=yeaC;gbkey=Gene;gene=yeaC;gene_biotype=protein_coding;locus_tag=AC00_RS15100;old_locus_tag=AC00_1934 NZ_JJLU01000066.1 Protein Homology CDS 78299 78571 . - 0 ID=cds-WP_001046791.1;Parent=gene-AC00_RS15100;Dbxref=GenBank:WP_001046791.1;Name=WP_001046791.1;gbkey=CDS;gene=yeaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310513.2;locus_tag=AC00_RS15100;product=YeaC family protein;protein_id=WP_001046791.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 78613 79026 . - . ID=gene-AC00_RS15095;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=AC00_RS15095;old_locus_tag=AC00_1935 NZ_JJLU01000066.1 Protein Homology CDS 78613 79026 . - 0 ID=cds-WP_001284618.1;Parent=gene-AC00_RS15095;Dbxref=GenBank:WP_001284618.1;Name=WP_001284618.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310514.1;locus_tag=AC00_RS15095;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_001284618.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 79368 80363 . + . ID=gene-AC00_RS15090;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=AC00_RS15090;old_locus_tag=AC00_1936 NZ_JJLU01000066.1 Protein Homology CDS 79368 80363 . + 0 ID=cds-WP_000153502.1;Parent=gene-AC00_RS15090;Dbxref=GenBank:WP_000153502.1;Name=WP_000153502.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=AC00_RS15090;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_000153502.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 80447 81331 . + . ID=gene-AC00_RS15085;Name=yeaD;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=AC00_RS15085;old_locus_tag=AC00_1937 NZ_JJLU01000066.1 Protein Homology CDS 80447 81331 . + 0 ID=cds-WP_032281011.1;Parent=gene-AC00_RS15085;Dbxref=GenBank:WP_032281011.1;Name=WP_032281011.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;gene=yeaD;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707334.2;locus_tag=AC00_RS15085;product=D-hexose-6-phosphate mutarotase;protein_id=WP_032281011.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 81382 82236 . - . ID=gene-AC00_RS15080;Name=yeaE;gbkey=Gene;gene=yeaE;gene_biotype=protein_coding;locus_tag=AC00_RS15080;old_locus_tag=AC00_1938 NZ_JJLU01000066.1 Protein Homology CDS 81382 82236 . - 0 ID=cds-WP_032281013.1;Parent=gene-AC00_RS15080;Dbxref=GenBank:WP_032281013.1;Name=WP_032281013.1;gbkey=CDS;gene=yeaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310517.1;locus_tag=AC00_RS15080;product=methylglyoxal reductase YeaE;protein_id=WP_032281013.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 82326 83072 . - . ID=gene-AC00_RS15075;Name=mipA;gbkey=Gene;gene=mipA;gene_biotype=protein_coding;locus_tag=AC00_RS15075;old_locus_tag=AC00_1939 NZ_JJLU01000066.1 Protein Homology CDS 82326 83072 . - 0 ID=cds-WP_000163771.1;Parent=gene-AC00_RS15075;Dbxref=GenBank:WP_000163771.1;Name=WP_000163771.1;gbkey=CDS;gene=mipA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416296.1;locus_tag=AC00_RS15075;product=scaffolding protein MipA;protein_id=WP_000163771.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 83508 85442 . + . ID=gene-AC00_RS15070;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=AC00_RS15070;old_locus_tag=AC00_1940 NZ_JJLU01000066.1 Protein Homology CDS 83508 85442 . + 0 ID=cds-WP_032281014.1;Parent=gene-AC00_RS15070;Dbxref=GenBank:WP_032281014.1;Name=WP_032281014.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=AC00_RS15070;product=protein kinase YeaG;protein_id=WP_032281014.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 85555 86838 . + . ID=gene-AC00_RS15065;Name=yeaH;gbkey=Gene;gene=yeaH;gene_biotype=protein_coding;locus_tag=AC00_RS15065;old_locus_tag=AC00_1941 NZ_JJLU01000066.1 Protein Homology CDS 85555 86838 . + 0 ID=cds-WP_032281015.1;Parent=gene-AC00_RS15065;Dbxref=GenBank:WP_032281015.1;Name=WP_032281015.1;gbkey=CDS;gene=yeaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310520.1;locus_tag=AC00_RS15065;product=YeaH/YhbH family protein;protein_id=WP_032281015.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 86985 88460 . + . ID=gene-AC00_RS15060;Name=cdgI;gbkey=Gene;gene=cdgI;gene_biotype=protein_coding;locus_tag=AC00_RS15060;old_locus_tag=AC00_1942 NZ_JJLU01000066.1 Protein Homology CDS 86985 88460 . + 0 ID=cds-WP_000616406.1;Parent=gene-AC00_RS15060;Dbxref=GenBank:WP_000616406.1;Name=WP_000616406.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;gene=cdgI;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416299.1;locus_tag=AC00_RS15060;product=sensor domain-containing diguanylate cyclase;protein_id=WP_000616406.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 88641 90131 . + . ID=gene-AC00_RS15055;Name=dgcJ;gbkey=Gene;gene=dgcJ;gene_biotype=protein_coding;locus_tag=AC00_RS15055;old_locus_tag=AC00_1943 NZ_JJLU01000066.1 Protein Homology CDS 88641 90131 . + 0 ID=cds-WP_001400633.1;Parent=gene-AC00_RS15055;Dbxref=GenBank:WP_001400633.1;Name=WP_001400633.1;Ontology_term=GO:0043709,GO:1902201,GO:0052621;gbkey=CDS;gene=dgcJ;go_function=diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA,negative regulation of bacterial-type flagellum-dependent cell motility|1902201||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416300.2;locus_tag=AC00_RS15055;product=diguanylate cyclase DgcJ;protein_id=WP_001400633.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 90174 90677 . + . ID=gene-AC00_RS15050;Name=yeaK;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=AC00_RS15050;old_locus_tag=AC00_1944 NZ_JJLU01000066.1 Protein Homology CDS 90174 90677 . + 0 ID=cds-WP_000138043.1;Parent=gene-AC00_RS15050;Dbxref=GenBank:WP_000138043.1;Name=WP_000138043.1;gbkey=CDS;gene=yeaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310523.1;locus_tag=AC00_RS15050;product=mischarged aminoacyl-tRNA deacylase;protein_id=WP_000138043.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 90678 90782 . - . ID=gene-AC00_RS15045;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=AC00_RS15045;old_locus_tag=AC00_1945 NZ_JJLU01000066.1 Protein Homology CDS 90678 90782 . - 0 ID=cds-WP_000999630.1;Parent=gene-AC00_RS15045;Dbxref=GenBank:WP_000999630.1;Name=WP_000999630.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416302.2;locus_tag=AC00_RS15045;product=small membrane protein YoaI;protein_id=WP_000999630.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 90952 91398 . + . ID=gene-AC00_RS15040;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=AC00_RS15040;old_locus_tag=AC00_1946 NZ_JJLU01000066.1 Protein Homology CDS 90952 91398 . + 0 ID=cds-WP_000460707.1;Parent=gene-AC00_RS15040;Dbxref=GenBank:WP_000460707.1;Name=WP_000460707.1;gbkey=CDS;gene=yeaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416303.1;locus_tag=AC00_RS15040;product=DUF441 domain-containing protein;protein_id=WP_000460707.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 91355 92176 . - . ID=gene-AC00_RS15035;Name=nimR;gbkey=Gene;gene=nimR;gene_biotype=protein_coding;locus_tag=AC00_RS15035;old_locus_tag=AC00_1947 NZ_JJLU01000066.1 Protein Homology CDS 91355 92176 . - 0 ID=cds-WP_032281016.1;Parent=gene-AC00_RS15035;Dbxref=GenBank:WP_032281016.1;Name=WP_032281016.1;gbkey=CDS;gene=nimR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416304.1;locus_tag=AC00_RS15035;product=DNA-binding transcriptional regulator NimR;protein_id=WP_032281016.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 92273 93454 . + . ID=gene-AC00_RS15030;Name=nimT;gbkey=Gene;gene=nimT;gene_biotype=protein_coding;locus_tag=AC00_RS15030;old_locus_tag=AC00_1948 NZ_JJLU01000066.1 Protein Homology CDS 92273 93454 . + 0 ID=cds-WP_000128490.1;Parent=gene-AC00_RS15030;Dbxref=GenBank:WP_000128490.1;Name=WP_000128490.1;gbkey=CDS;gene=nimT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310527.1;locus_tag=AC00_RS15030;product=2-nitroimidazole transporter;protein_id=WP_000128490.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 93509 93856 . + . ID=gene-AC00_RS15025;Name=yeaO;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=AC00_RS15025;old_locus_tag=AC00_1949 NZ_JJLU01000066.1 Protein Homology CDS 93509 93856 . + 0 ID=cds-WP_001025381.1;Parent=gene-AC00_RS15025;Dbxref=GenBank:WP_001025381.1;Name=WP_001025381.1;gbkey=CDS;gene=yeaO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310528.2;locus_tag=AC00_RS15025;product=DUF488 domain-containing protein;protein_id=WP_001025381.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 93878 94132 . - . ID=gene-AC00_RS15020;Name=yoaF;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=AC00_RS15020;old_locus_tag=AC00_1950 NZ_JJLU01000066.1 Protein Homology CDS 93878 94132 . - 0 ID=cds-WP_032281017.1;Parent=gene-AC00_RS15020;Dbxref=GenBank:WP_032281017.1;Name=WP_032281017.1;gbkey=CDS;gene=yoaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416307.1;locus_tag=AC00_RS15020;product=DUF333 domain-containing lipoprotein YoaF;protein_id=WP_032281017.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 94315 95340 . + . ID=gene-AC00_RS15015;Name=dgcP;gbkey=Gene;gene=dgcP;gene_biotype=protein_coding;locus_tag=AC00_RS15015;old_locus_tag=AC00_1951 NZ_JJLU01000066.1 Protein Homology CDS 94315 95340 . + 0 ID=cds-WP_032281018.1;Parent=gene-AC00_RS15015;Dbxref=GenBank:WP_032281018.1;Name=WP_032281018.1;gbkey=CDS;gene=dgcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416308.4;locus_tag=AC00_RS15015;product=diguanylate cyclase DgcP;protein_id=WP_032281018.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 95373 95471 . + . ID=gene-AC00_RS0124700;Name=yoaK;gbkey=Gene;gene=yoaK;gene_biotype=protein_coding;locus_tag=AC00_RS0124700 NZ_JJLU01000066.1 Protein Homology CDS 95373 95471 . + 0 ID=cds-WP_001219350.1;Parent=gene-AC00_RS0124700;Dbxref=GenBank:WP_001219350.1;Name=WP_001219350.1;gbkey=CDS;gene=yoaK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=AC00_RS0124700;product=YoaK family small membrane protein;protein_id=WP_001219350.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 95474 95548 . + . ID=gene-AC00_RS29535;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=AC00_RS29535 NZ_JJLU01000066.1 Protein Homology CDS 95474 95548 . + 0 ID=cds-WP_001386836.1;Parent=gene-AC00_RS29535;Dbxref=GenBank:WP_001386836.1;Name=WP_001386836.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791243.1;locus_tag=AC00_RS29535;product=protein YoaJ;protein_id=WP_001386836.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 95606 95854 . - . ID=gene-AC00_RS15010;Name=yeaQ;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=AC00_RS15010;old_locus_tag=AC00_1953 NZ_JJLU01000066.1 Protein Homology CDS 95606 95854 . - 0 ID=cds-WP_000512153.1;Parent=gene-AC00_RS15010;Dbxref=GenBank:WP_000512153.1;Name=WP_000512153.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeaQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=AC00_RS15010;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_000512153.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 96002 96184 . - . ID=gene-AC00_RS15005;Name=yoaG;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=AC00_RS15005;old_locus_tag=AC00_1955 NZ_JJLU01000066.1 Protein Homology CDS 96002 96184 . - 0 ID=cds-WP_000513737.1;Parent=gene-AC00_RS15005;Dbxref=GenBank:WP_000513737.1;Name=WP_000513737.1;gbkey=CDS;gene=yoaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310532.1;locus_tag=AC00_RS15005;product=DUF1869 domain-containing protein;protein_id=WP_000513737.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 96188 96547 . - . ID=gene-AC00_RS15000;Name=yeaR;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=AC00_RS15000;old_locus_tag=AC00_1956 NZ_JJLU01000066.1 Protein Homology CDS 96188 96547 . - 0 ID=cds-WP_000939317.1;Parent=gene-AC00_RS15000;Dbxref=GenBank:WP_000939317.1;Name=WP_000939317.1;gbkey=CDS;gene=yeaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310533.1;locus_tag=AC00_RS15000;product=DUF1971 domain-containing protein YeaR;protein_id=WP_000939317.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 96720 97358 . - . ID=gene-AC00_RS14995;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=AC00_RS14995;old_locus_tag=AC00_1958 NZ_JJLU01000066.1 Protein Homology CDS 96720 97358 . - 0 ID=cds-WP_000457202.1;Parent=gene-AC00_RS14995;Dbxref=GenBank:WP_000457202.1;Name=WP_000457202.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310534.1;locus_tag=AC00_RS14995;product=leucine efflux protein LeuE;protein_id=WP_000457202.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 97485 98408 . - . ID=gene-AC00_RS14990;Name=dmlR;gbkey=Gene;gene=dmlR;gene_biotype=protein_coding;locus_tag=AC00_RS14990;old_locus_tag=AC00_1959 NZ_JJLU01000066.1 Protein Homology CDS 97485 98408 . - 0 ID=cds-WP_032281044.1;Parent=gene-AC00_RS14990;Dbxref=GenBank:WP_032281044.1;Name=WP_032281044.1;gbkey=CDS;gene=dmlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310535.2;locus_tag=AC00_RS14990;product=DNA-binding transcriptional regulator DmlR;protein_id=WP_032281044.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 98511 99596 . + . ID=gene-AC00_RS14985;Name=dmlA;gbkey=Gene;gene=dmlA;gene_biotype=protein_coding;locus_tag=AC00_RS14985;old_locus_tag=AC00_1960 NZ_JJLU01000066.1 Protein Homology CDS 98511 99596 . + 0 ID=cds-WP_032281019.1;Parent=gene-AC00_RS14985;Dbxref=GenBank:WP_032281019.1;Name=WP_032281019.1;gbkey=CDS;gene=dmlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310536.1;locus_tag=AC00_RS14985;product=multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase;protein_id=WP_032281019.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 99847 101457 . + . ID=gene-AC00_RS14980;Name=yeaV;gbkey=Gene;gene=yeaV;gene_biotype=protein_coding;locus_tag=AC00_RS14980;old_locus_tag=AC00_1961 NZ_JJLU01000066.1 Protein Homology CDS 99847 101457 . + 0 ID=cds-WP_000987525.1;Parent=gene-AC00_RS14980;Dbxref=GenBank:WP_000987525.1;Name=WP_000987525.1;gbkey=CDS;gene=yeaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310537.2;locus_tag=AC00_RS14980;product=BCCT family transporter YeaV;protein_id=WP_000987525.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 101489 102613 . + . ID=gene-AC00_RS14975;Name=yeaW;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=AC00_RS14975;old_locus_tag=AC00_1962 NZ_JJLU01000066.1 Protein Homology CDS 101489 102613 . + 0 ID=cds-WP_032281020.1;Parent=gene-AC00_RS14975;Dbxref=GenBank:WP_032281020.1;Name=WP_032281020.1;gbkey=CDS;gene=yeaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310538.1;locus_tag=AC00_RS14975;product=carnitine monooxygenase%2C oxygenase subunit YeaW;protein_id=WP_032281020.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 102669 103634 . + . ID=gene-AC00_RS14970;Name=yeaX;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=AC00_RS14970;old_locus_tag=AC00_1963 NZ_JJLU01000066.1 Protein Homology CDS 102669 103634 . + 0 ID=cds-WP_032281021.1;Parent=gene-AC00_RS14970;Dbxref=GenBank:WP_032281021.1;Name=WP_032281021.1;gbkey=CDS;gene=yeaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416317.1;locus_tag=AC00_RS14970;product=carnitine monooxygenase reductase subunit YeaX;protein_id=WP_032281021.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 103688 104803 . - . ID=gene-AC00_RS14965;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=AC00_RS14965;old_locus_tag=AC00_1964 NZ_JJLU01000066.1 Protein Homology CDS 103688 104803 . - 0 ID=cds-WP_032281022.1;Parent=gene-AC00_RS14965;Dbxref=GenBank:WP_032281022.1;Name=WP_032281022.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707318.2;locus_tag=AC00_RS14965;product=ribonuclease D;protein_id=WP_032281022.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 104885 106570 . - . ID=gene-AC00_RS14960;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=AC00_RS14960;old_locus_tag=AC00_1965 NZ_JJLU01000066.1 Protein Homology CDS 104885 106570 . - 0 ID=cds-WP_077757386.1;Parent=gene-AC00_RS14960;Dbxref=GenBank:WP_077757386.1;Name=WP_077757386.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=AC00_RS14960;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_077757386.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 106775 107356 . - . ID=gene-AC00_RS14955;Name=yeaY;gbkey=Gene;gene=yeaY;gene_biotype=protein_coding;locus_tag=AC00_RS14955;old_locus_tag=AC00_1966 NZ_JJLU01000066.1 Protein Homology CDS 106775 107356 . - 0 ID=cds-WP_000290579.1;Parent=gene-AC00_RS14955;Dbxref=GenBank:WP_000290579.1;Name=WP_000290579.1;gbkey=CDS;gene=yeaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=AC00_RS14955;product=Slp family lipoprotein YeaY;protein_id=WP_000290579.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 107396 108091 . - . ID=gene-AC00_RS14950;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AC00_RS14950;old_locus_tag=AC00_1967 NZ_JJLU01000066.1 Protein Homology CDS 107396 108091 . - 0 ID=cds-WP_021577586.1;Parent=gene-AC00_RS14950;Dbxref=GenBank:WP_021577586.1;Name=WP_021577586.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310543.1;locus_tag=AC00_RS14950;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_021577586.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 108149 110059 . - . ID=gene-AC00_RS14945;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=AC00_RS14945;old_locus_tag=AC00_1968 NZ_JJLU01000066.1 Protein Homology CDS 108149 110059 . - 0 ID=cds-WP_001664182.1;Parent=gene-AC00_RS14945;Dbxref=GenBank:WP_001664182.1;Name=WP_001664182.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;gene=yoaA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310544.1;locus_tag=AC00_RS14945;product=ATP-dependent DNA helicase;protein_id=WP_001664182.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 110191 110535 . + . ID=gene-AC00_RS14940;Name=yoaB;gbkey=Gene;gene=yoaB;gene_biotype=protein_coding;locus_tag=AC00_RS14940;old_locus_tag=AC00_1969 NZ_JJLU01000066.1 Protein Homology CDS 110191 110535 . + 0 ID=cds-WP_001295493.1;Parent=gene-AC00_RS14940;Dbxref=GenBank:WP_001295493.1;Name=WP_001295493.1;gbkey=CDS;gene=yoaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416323.4;locus_tag=AC00_RS14940;product=RidA family protein;protein_id=WP_001295493.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 110957 111256 . + . ID=gene-AC00_RS14935;Name=yoaC;gbkey=Gene;gene=yoaC;gene_biotype=protein_coding;locus_tag=AC00_RS14935;old_locus_tag=AC00_1971 NZ_JJLU01000066.1 Protein Homology CDS 110957 111256 . + 0 ID=cds-WP_001111995.1;Parent=gene-AC00_RS14935;Dbxref=GenBank:WP_001111995.1;Name=WP_001111995.1;gbkey=CDS;gene=yoaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416324.2;locus_tag=AC00_RS14935;product=DUF1889 family protein;protein_id=WP_001111995.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 111376 111555 . - . ID=gene-AC00_RS14930;Name=yoaH;gbkey=Gene;gene=yoaH;gene_biotype=protein_coding;locus_tag=AC00_RS14930;old_locus_tag=AC00_1972 NZ_JJLU01000066.1 Protein Homology CDS 111376 111555 . - 0 ID=cds-WP_000457334.1;Parent=gene-AC00_RS14930;Dbxref=GenBank:WP_000457334.1;Name=WP_000457334.1;gbkey=CDS;gene=yoaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310547.1;locus_tag=AC00_RS14930;product=YoaH family protein;protein_id=WP_000457334.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 111629 112990 . + . ID=gene-AC00_RS14925;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=AC00_RS14925;old_locus_tag=AC00_1973 NZ_JJLU01000066.1 Protein Homology CDS 111629 112990 . + 0 ID=cds-WP_032281026.1;Parent=gene-AC00_RS14925;Dbxref=GenBank:WP_032281026.1;Name=WP_032281026.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707310.1;locus_tag=AC00_RS14925;product=aminodeoxychorismate synthase component 1;protein_id=WP_032281026.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 112994 113572 . + . ID=gene-AC00_RS14920;Name=nudL;gbkey=Gene;gene=nudL;gene_biotype=protein_coding;locus_tag=AC00_RS14920;old_locus_tag=AC00_1974 NZ_JJLU01000066.1 Protein Homology CDS 112994 113572 . + 0 ID=cds-WP_001297602.1;Parent=gene-AC00_RS14920;Dbxref=GenBank:WP_001297602.1;Name=WP_001297602.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;gene=nudL;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310549.1;locus_tag=AC00_RS14920;product=CoA pyrophosphatase;protein_id=WP_001297602.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 113756 115120 . + . ID=gene-AC00_RS14915;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=AC00_RS14915;old_locus_tag=AC00_1975 NZ_JJLU01000066.1 Protein Homology CDS 113756 115120 . + 0 ID=cds-WP_000624298.1;Parent=gene-AC00_RS14915;Dbxref=GenBank:WP_000624298.1;Name=WP_000624298.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416328.1;locus_tag=AC00_RS14915;product=L-serine ammonia-lyase;protein_id=WP_000624298.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 115251 116849 . + . ID=gene-AC00_RS14910;Name=pdeD;gbkey=Gene;gene=pdeD;gene_biotype=protein_coding;locus_tag=AC00_RS14910;old_locus_tag=AC00_1976 NZ_JJLU01000066.1 Protein Homology CDS 115251 116849 . + 0 ID=cds-WP_032281027.1;Parent=gene-AC00_RS14910;Dbxref=GenBank:WP_032281027.1;Name=WP_032281027.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;gene=pdeD;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310551.2;locus_tag=AC00_RS14910;product=EAL domain-containing protein;protein_id=WP_032281027.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 116853 118409 . - . ID=gene-AC00_RS14905;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=AC00_RS14905;old_locus_tag=AC00_1977 NZ_JJLU01000066.1 Protein Homology CDS 116853 118409 . - 0 ID=cds-WP_000394984.1;Parent=gene-AC00_RS14905;Dbxref=GenBank:WP_000394984.1;Name=WP_000394984.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=AC00_RS14905;product=CNNM family cation transport protein YoaE;protein_id=WP_000394984.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 118397 118555 . - . ID=gene-AC00_RS31540;Name=yoaL;gbkey=Gene;gene=yoaL;gene_biotype=protein_coding;locus_tag=AC00_RS31540 NZ_JJLU01000066.1 Protein Homology CDS 118397 118555 . - 0 ID=cds-WP_001327808.1;Parent=gene-AC00_RS31540;Dbxref=GenBank:WP_001327808.1;Name=WP_001327808.1;gbkey=CDS;gene=yoaL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518795.2;locus_tag=AC00_RS31540;product=protein YoaL;protein_id=WP_001327808.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 118872 119843 . + . ID=gene-AC00_RS14900;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=AC00_RS14900;old_locus_tag=AC00_1978 NZ_JJLU01000066.1 Protein Homology CDS 118872 119843 . + 0 ID=cds-WP_000150543.1;Parent=gene-AC00_RS14900;Dbxref=GenBank:WP_000150543.1;Name=WP_000150543.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310554.1;locus_tag=AC00_RS14900;product=PTS mannose transporter subunit IIAB;protein_id=WP_000150543.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 119906 120706 . + . ID=gene-AC00_RS14895;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=AC00_RS14895;old_locus_tag=AC00_1979 NZ_JJLU01000066.1 Protein Homology CDS 119906 120706 . + 0 ID=cds-WP_000406926.1;Parent=gene-AC00_RS14895;Dbxref=GenBank:WP_000406926.1;Name=WP_000406926.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=AC00_RS14895;product=PTS mannose transporter subunit IIC;protein_id=WP_000406926.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 120719 121570 . + . ID=gene-AC00_RS14890;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=AC00_RS14890;old_locus_tag=AC00_1980 NZ_JJLU01000066.1 Protein Homology CDS 120719 121570 . + 0 ID=cds-WP_000228655.1;Parent=gene-AC00_RS14890;Dbxref=GenBank:WP_000228655.1;Name=WP_000228655.1;gbkey=CDS;gene=manZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=AC00_RS14890;product=PTS mannose transporter subunit IID;protein_id=WP_000228655.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 121625 122083 . + . ID=gene-AC00_RS0124710;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=AC00_RS0124710 NZ_JJLU01000066.1 Protein Homology CDS 121625 122083 . + 0 ID=cds-WP_000156258.1;Parent=gene-AC00_RS0124710;Dbxref=GenBank:WP_000156258.1;Name=WP_000156258.1;gbkey=CDS;gene=yobD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310557.1;locus_tag=AC00_RS0124710;product=DUF986 family protein;protein_id=WP_000156258.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 122394 122516 . + . ID=gene-AC00_RS31545;Name=AC00_RS31545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31545;old_locus_tag=AC00_1983 NZ_JJLU01000066.1 GeneMarkS-2+ CDS 122394 122516 . + 0 ID=cds-WP_000547919.1;Parent=gene-AC00_RS31545;Dbxref=GenBank:WP_000547919.1;Name=WP_000547919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31545;product=hypothetical protein;protein_id=WP_000547919.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 122513 123079 . + . ID=gene-AC00_RS14880;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=AC00_RS14880;old_locus_tag=AC00_1984 NZ_JJLU01000066.1 Protein Homology CDS 122513 123079 . + 0 ID=cds-WP_001296134.1;Parent=gene-AC00_RS14880;Dbxref=GenBank:WP_001296134.1;Name=WP_001296134.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=AC00_RS14880;product=manganese efflux pump MntP;protein_id=WP_001296134.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 123076 123885 . - . ID=gene-AC00_RS14875;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=AC00_RS14875;old_locus_tag=AC00_1985 NZ_JJLU01000066.1 Protein Homology CDS 123076 123885 . - 0 ID=cds-WP_032281029.1;Parent=gene-AC00_RS14875;Dbxref=GenBank:WP_032281029.1;Name=WP_032281029.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310559.1;locus_tag=AC00_RS14875;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_032281029.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 124051 124260 . - . ID=gene-AC00_RS14870;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC00_RS14870;old_locus_tag=AC00_1986 NZ_JJLU01000066.1 Protein Homology CDS 124051 124260 . - 0 ID=cds-WP_001062678.1;Parent=gene-AC00_RS14870;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=AC00_RS14870;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 124273 124416 . - . ID=gene-AC00_RS14865;Name=yobF;gbkey=Gene;gene=yobF;gene_biotype=protein_coding;locus_tag=AC00_RS14865;old_locus_tag=AC00_1987 NZ_JJLU01000066.1 Protein Homology CDS 124273 124416 . - 0 ID=cds-WP_001295496.1;Parent=gene-AC00_RS14865;Dbxref=GenBank:WP_001295496.1;Name=WP_001295496.1;gbkey=CDS;gene=yobF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=AC00_RS14865;product=DUF2627 domain-containing protein;protein_id=WP_001295496.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 125086 125373 . - . ID=gene-AC00_RS14860;Name=yebO;gbkey=Gene;gene=yebO;gene_biotype=protein_coding;locus_tag=AC00_RS14860;old_locus_tag=AC00_1988 NZ_JJLU01000066.1 Protein Homology CDS 125086 125373 . - 0 ID=cds-WP_032281030.1;Parent=gene-AC00_RS14860;Dbxref=GenBank:WP_032281030.1;Name=WP_032281030.1;gbkey=CDS;gene=yebO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310562.1;locus_tag=AC00_RS14860;product=YebO family protein;protein_id=WP_032281030.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 125448 125591 . - . ID=gene-AC00_RS14855;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=AC00_RS14855;old_locus_tag=AC00_1989 NZ_JJLU01000066.1 Protein Homology CDS 125448 125591 . - 0 ID=cds-WP_000714550.1;Parent=gene-AC00_RS14855;Dbxref=GenBank:WP_000714550.1;Name=WP_000714550.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416340.1;locus_tag=AC00_RS14855;product=PhoP/PhoQ regulator MgrB;protein_id=WP_000714550.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 125750 125989 . + . ID=gene-AC00_RS14850;Name=yobH;gbkey=Gene;gene=yobH;gene_biotype=protein_coding;locus_tag=AC00_RS14850;old_locus_tag=AC00_1990 NZ_JJLU01000066.1 Protein Homology CDS 125750 125989 . + 0 ID=cds-WP_001211011.1;Parent=gene-AC00_RS14850;Dbxref=GenBank:WP_001211011.1;Name=WP_001211011.1;gbkey=CDS;gene=yobH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588456.1;locus_tag=AC00_RS14850;product=YobH family protein;protein_id=WP_001211011.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 126133 126924 . - . ID=gene-AC00_RS14845;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=AC00_RS14845;old_locus_tag=AC00_1991 NZ_JJLU01000066.1 Protein Homology CDS 126133 126924 . - 0 ID=cds-WP_001262182.1;Parent=gene-AC00_RS14845;Dbxref=GenBank:WP_001262182.1;Name=WP_001262182.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310564.1;locus_tag=AC00_RS14845;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_001262182.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 127101 128474 . + . ID=gene-AC00_RS14840;Name=yebQ;gbkey=Gene;gene=yebQ;gene_biotype=protein_coding;locus_tag=AC00_RS14840;old_locus_tag=AC00_1992 NZ_JJLU01000066.1 Protein Homology CDS 127101 128474 . + 0 ID=cds-WP_032281031.1;Parent=gene-AC00_RS14840;Dbxref=GenBank:WP_032281031.1;Name=WP_032281031.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yebQ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310565.2;locus_tag=AC00_RS14840;product=MFS transporter;protein_id=WP_032281031.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 128520 129401 . - . ID=gene-AC00_RS14835;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AC00_RS14835;old_locus_tag=AC00_1993 NZ_JJLU01000066.1 Protein Homology CDS 128520 129401 . - 0 ID=cds-WP_001433082.1;Parent=gene-AC00_RS14835;Dbxref=GenBank:WP_001433082.1;Name=WP_001433082.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=AC00_RS14835;product=protease HtpX;protein_id=WP_001433082.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 129593 131641 . - . ID=gene-AC00_RS14830;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=AC00_RS14830;old_locus_tag=AC00_1994 NZ_JJLU01000066.1 Protein Homology CDS 129593 131641 . - 0 ID=cds-WP_001055778.1;Parent=gene-AC00_RS14830;Dbxref=GenBank:WP_001055778.1;Name=WP_001055778.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310567.1;locus_tag=AC00_RS14830;product=carboxy terminal-processing peptidase;protein_id=WP_001055778.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 131661 132359 . - . ID=gene-AC00_RS14825;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=AC00_RS14825;old_locus_tag=AC00_1995 NZ_JJLU01000066.1 Protein Homology CDS 131661 132359 . - 0 ID=cds-WP_000431368.1;Parent=gene-AC00_RS14825;Dbxref=GenBank:WP_000431368.1;Name=WP_000431368.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310568.1;locus_tag=AC00_RS14825;product=RNA chaperone ProQ;protein_id=WP_000431368.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 132456 132953 . - . ID=gene-AC00_RS14820;Name=msrC;gbkey=Gene;gene=msrC;gene_biotype=protein_coding;locus_tag=AC00_RS14820;old_locus_tag=AC00_1996 NZ_JJLU01000066.1 Protein Homology CDS 132456 132953 . - 0 ID=cds-WP_001043882.1;Parent=gene-AC00_RS14820;Dbxref=GenBank:WP_001043882.1;Name=WP_001043882.1;gbkey=CDS;gene=msrC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=AC00_RS14820;product=L-methionine (R)-S-oxide reductase;protein_id=WP_001043882.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 133083 134366 . + . ID=gene-AC00_RS14815;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=AC00_RS14815;old_locus_tag=AC00_1997 NZ_JJLU01000066.1 Protein Homology CDS 133083 134366 . + 0 ID=cds-WP_001207282.1;Parent=gene-AC00_RS14815;Dbxref=GenBank:WP_001207282.1;Name=WP_001207282.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310570.1;locus_tag=AC00_RS14815;product=membrane integrity lipid transport subunit YebS;protein_id=WP_001207282.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 134335 136968 . + . ID=gene-AC00_RS14810;Name=yebT;gbkey=Gene;gene=yebT;gene_biotype=protein_coding;locus_tag=AC00_RS14810;old_locus_tag=AC00_1998 NZ_JJLU01000066.1 Protein Homology CDS 134335 136968 . + 0 ID=cds-WP_032281032.1;Parent=gene-AC00_RS14810;Dbxref=GenBank:WP_032281032.1;Name=WP_032281032.1;gbkey=CDS;gene=yebT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=AC00_RS14810;product=lipid-binding membrane homeostasis protein YebT;protein_id=WP_032281032.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 137048 138487 . + . ID=gene-AC00_RS14805;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=AC00_RS14805;old_locus_tag=AC00_1999 NZ_JJLU01000066.1 Protein Homology CDS 137048 138487 . + 0 ID=cds-WP_032281045.1;Parent=gene-AC00_RS14805;Dbxref=GenBank:WP_032281045.1;Name=WP_032281045.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416349.2;locus_tag=AC00_RS14805;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_032281045.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 138604 138840 . + . ID=gene-AC00_RS14800;Name=yebV;gbkey=Gene;gene=yebV;gene_biotype=protein_coding;locus_tag=AC00_RS14800;old_locus_tag=AC00_2000 NZ_JJLU01000066.1 Protein Homology CDS 138604 138840 . + 0 ID=cds-WP_001295499.1;Parent=gene-AC00_RS14800;Dbxref=GenBank:WP_001295499.1;Name=WP_001295499.1;gbkey=CDS;gene=yebV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707284.2;locus_tag=AC00_RS14800;product=YebV family protein;protein_id=WP_001295499.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 138945 139136 . + . ID=gene-AC00_RS14795;Name=yebW;gbkey=Gene;gene=yebW;gene_biotype=protein_coding;locus_tag=AC00_RS14795;old_locus_tag=AC00_2001 NZ_JJLU01000066.1 Protein Homology CDS 138945 139136 . + 0 ID=cds-WP_001296140.1;Parent=gene-AC00_RS14795;Dbxref=GenBank:WP_001296140.1;Name=WP_001296140.1;gbkey=CDS;gene=yebW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416351.2;locus_tag=AC00_RS14795;product=YebW family protein;protein_id=WP_001296140.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 139137 139793 . - . ID=gene-AC00_RS14790;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=AC00_RS14790;old_locus_tag=AC00_2002 NZ_JJLU01000066.1 Protein Homology CDS 139137 139793 . - 0 ID=cds-WP_032281033.1;Parent=gene-AC00_RS14790;Dbxref=GenBank:WP_032281033.1;Name=WP_032281033.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310575.2;locus_tag=AC00_RS14790;product=protein-serine/threonine phosphatase;protein_id=WP_032281033.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 140189 140530 . - . ID=gene-AC00_RS14785;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=AC00_RS14785;old_locus_tag=AC00_2003 NZ_JJLU01000066.1 Protein Homology CDS 140189 140530 . - 0 ID=cds-WP_000976472.1;Parent=gene-AC00_RS14785;Dbxref=GenBank:WP_000976472.1;Name=WP_000976472.1;gbkey=CDS;gene=yebY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310576.1;locus_tag=AC00_RS14785;product=YebY family protein;protein_id=WP_000976472.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 140542 141414 . - . ID=gene-AC00_RS14780;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=AC00_RS14780;old_locus_tag=AC00_2004 NZ_JJLU01000066.1 Protein Homology CDS 140542 141414 . - 0 ID=cds-WP_000879287.1;Parent=gene-AC00_RS14780;Dbxref=GenBank:WP_000879287.1;Name=WP_000879287.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310577.1;locus_tag=AC00_RS14780;product=copper homeostasis membrane protein CopD;protein_id=WP_000879287.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 141418 141792 . - . ID=gene-AC00_RS14775;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=AC00_RS14775;old_locus_tag=AC00_2005 NZ_JJLU01000066.1 Protein Homology CDS 141418 141792 . - 0 ID=cds-WP_000168747.1;Parent=gene-AC00_RS14775;Dbxref=GenBank:WP_000168747.1;Name=WP_000168747.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416355.1;locus_tag=AC00_RS14775;product=CopC domain-containing protein YobA;protein_id=WP_000168747.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 141931 142161 . + . ID=gene-AC00_RS14770;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=AC00_RS14770;old_locus_tag=AC00_2006 NZ_JJLU01000066.1 Protein Homology CDS 141931 142161 . + 0 ID=cds-WP_000916763.1;Parent=gene-AC00_RS14770;Dbxref=GenBank:WP_000916763.1;Name=WP_000916763.1;gbkey=CDS;gene=holE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310579.1;locus_tag=AC00_RS14770;product=DNA polymerase III subunit theta;protein_id=WP_000916763.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 142263 142919 . + . ID=gene-AC00_RS14765;Name=yobB;gbkey=Gene;gene=yobB;gene_biotype=protein_coding;locus_tag=AC00_RS14765;old_locus_tag=AC00_2007 NZ_JJLU01000066.1 Protein Homology CDS 142263 142919 . + 0 ID=cds-WP_000011660.1;Parent=gene-AC00_RS14765;Dbxref=GenBank:WP_000011660.1;Name=WP_000011660.1;gbkey=CDS;gene=yobB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310580.1;locus_tag=AC00_RS14765;product=carbon-nitrogen hydrolase family protein YobB;protein_id=WP_000011660.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 142943 143605 . + . ID=gene-AC00_RS14760;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=AC00_RS14760;old_locus_tag=AC00_2008 NZ_JJLU01000066.1 Protein Homology CDS 142943 143605 . + 0 ID=cds-WP_000944256.1;Parent=gene-AC00_RS14760;Dbxref=GenBank:WP_000944256.1;Name=WP_000944256.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416358.1;locus_tag=AC00_RS14760;product=exodeoxyribonuclease X;protein_id=WP_000944256.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 143602 145662 . - . ID=gene-AC00_RS14755;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=AC00_RS14755;old_locus_tag=AC00_2009 NZ_JJLU01000066.1 Protein Homology CDS 143602 145662 . - 0 ID=cds-WP_032281034.1;Parent=gene-AC00_RS14755;Dbxref=GenBank:WP_032281034.1;Name=WP_032281034.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310582.1;locus_tag=AC00_RS14755;product=oligopeptidase B;protein_id=WP_032281034.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 145871 146530 . - . ID=gene-AC00_RS14750;Name=yebE;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=AC00_RS14750;old_locus_tag=AC00_2011 NZ_JJLU01000066.1 Protein Homology CDS 145871 146530 . - 0 ID=cds-WP_032288212.1;Parent=gene-AC00_RS14750;Dbxref=GenBank:WP_032288212.1;Name=WP_032288212.1;gbkey=CDS;gene=yebE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310583.1;locus_tag=AC00_RS14750;product=tellurite resistance TerB family protein;protein_id=WP_032288212.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 146855 147211 . - . ID=gene-AC00_RS14745;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=AC00_RS14745;old_locus_tag=AC00_2013 NZ_JJLU01000066.1 Protein Homology CDS 146855 147211 . - 0 ID=cds-WP_001295500.1;Parent=gene-AC00_RS14745;Dbxref=GenBank:WP_001295500.1;Name=WP_001295500.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310584.2;locus_tag=AC00_RS14745;product=protein YebF;protein_id=WP_001295500.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 147278 147568 . - . ID=gene-AC00_RS14740;Name=yebG;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=AC00_RS14740;old_locus_tag=AC00_2014 NZ_JJLU01000066.1 Protein Homology CDS 147278 147568 . - 0 ID=cds-WP_000257738.1;Parent=gene-AC00_RS14740;Dbxref=GenBank:WP_000257738.1;Name=WP_000257738.1;gbkey=CDS;gene=yebG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310585.1;locus_tag=AC00_RS14740;product=DNA damage-inducible protein YebG;protein_id=WP_000257738.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 147702 148880 . + . ID=gene-AC00_RS14735;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AC00_RS14735;old_locus_tag=AC00_2015 NZ_JJLU01000066.1 Protein Homology CDS 147702 148880 . + 0 ID=cds-WP_032281035.1;Parent=gene-AC00_RS14735;Dbxref=GenBank:WP_032281035.1;Name=WP_032281035.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310586.1;locus_tag=AC00_RS14735;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_032281035.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 148936 149577 . - . ID=gene-AC00_RS14730;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=AC00_RS14730;old_locus_tag=AC00_2016 NZ_JJLU01000066.1 Protein Homology CDS 148936 149577 . - 0 ID=cds-WP_000800512.1;Parent=gene-AC00_RS14730;Dbxref=GenBank:WP_000800512.1;Name=WP_000800512.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310587.1;locus_tag=AC00_RS14730;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_000800512.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 149614 151425 . - . ID=gene-AC00_RS14725;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=AC00_RS14725;old_locus_tag=AC00_2017 NZ_JJLU01000066.1 Protein Homology CDS 149614 151425 . - 0 ID=cds-WP_001069467.1;Parent=gene-AC00_RS14725;Dbxref=GenBank:WP_001069467.1;Name=WP_001069467.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=AC00_RS14725;product=phosphogluconate dehydratase;protein_id=WP_001069467.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 151660 153135 . - . ID=gene-AC00_RS14720;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=AC00_RS14720;old_locus_tag=AC00_2018 NZ_JJLU01000066.1 Protein Homology CDS 151660 153135 . - 0 ID=cds-WP_000301720.1;Parent=gene-AC00_RS14720;Dbxref=GenBank:WP_000301720.1;Name=WP_000301720.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=AC00_RS14720;product=glucose-6-phosphate dehydrogenase;protein_id=WP_000301720.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 153473 154342 . + . ID=gene-AC00_RS14710;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;gene_synonym=yebK;locus_tag=AC00_RS14710;old_locus_tag=AC00_2020 NZ_JJLU01000066.1 Protein Homology CDS 153473 154342 . + 0 ID=cds-WP_001056694.1;Parent=gene-AC00_RS14710;Dbxref=GenBank:WP_001056694.1;Name=WP_001056694.1;gbkey=CDS;gene=hexR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310590.1;locus_tag=AC00_RS14710;product=DNA-binding transcriptional regulator HexR;protein_id=WP_001056694.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 154470 155912 . + . ID=gene-AC00_RS14705;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AC00_RS14705;old_locus_tag=AC00_2021 NZ_JJLU01000066.1 Protein Homology CDS 154470 155912 . + 0 ID=cds-WP_000091148.1;Parent=gene-AC00_RS14705;Dbxref=GenBank:WP_000091148.1;Name=WP_000091148.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=AC00_RS14705;product=pyruvate kinase;protein_id=WP_000091148.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 156043 157014 . - . ID=gene-AC00_RS14700;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=AC00_RS14700;old_locus_tag=AC00_2022 NZ_JJLU01000066.1 Protein Homology CDS 156043 157014 . - 0 ID=cds-WP_000448381.1;Parent=gene-AC00_RS14700;Dbxref=GenBank:WP_000448381.1;Name=WP_000448381.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416369.1;locus_tag=AC00_RS14700;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_000448381.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 157134 158456 . - . ID=gene-AC00_RS14695;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=AC00_RS14695;old_locus_tag=AC00_2023 NZ_JJLU01000066.1 Protein Homology CDS 157134 158456 . - 0 ID=cds-WP_001184045.1;Parent=gene-AC00_RS14695;Dbxref=GenBank:WP_001184045.1;Name=WP_001184045.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707716.1;locus_tag=AC00_RS14695;product=murein DD-endopeptidase MepM;protein_id=WP_001184045.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 158472 159404 . - . ID=gene-AC00_RS14690;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=AC00_RS14690;old_locus_tag=AC00_2024 NZ_JJLU01000066.1 Protein Homology CDS 158472 159404 . - 0 ID=cds-WP_001342995.1;Parent=gene-AC00_RS14690;Dbxref=GenBank:WP_001342995.1;Name=WP_001342995.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=AC00_RS14690;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_001342995.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 159483 160238 . + . ID=gene-AC00_RS14685;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=AC00_RS14685;old_locus_tag=AC00_2025 NZ_JJLU01000066.1 Protein Homology CDS 159483 160238 . + 0 ID=cds-WP_000202996.1;Parent=gene-AC00_RS14685;Dbxref=GenBank:WP_000202996.1;Name=WP_000202996.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=AC00_RS14685;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_000202996.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 160235 161020 . + . ID=gene-AC00_RS14680;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=AC00_RS14680;old_locus_tag=AC00_2026 NZ_JJLU01000066.1 Protein Homology CDS 160235 161020 . + 0 ID=cds-WP_000571478.1;Parent=gene-AC00_RS14680;Dbxref=GenBank:WP_000571478.1;Name=WP_000571478.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310596.1;locus_tag=AC00_RS14680;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_000571478.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 161266 162276 . - . ID=gene-AC00_RS14675;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AC00_RS14675;old_locus_tag=AC00_2027 NZ_JJLU01000066.1 Protein Homology CDS 161266 162276 . - 0 ID=cds-WP_000568519.1;Parent=gene-AC00_RS14675;Dbxref=GenBank:WP_000568519.1;Name=WP_000568519.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=AC00_RS14675;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_000568519.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 162285 162896 . - . ID=gene-AC00_RS14670;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AC00_RS14670;old_locus_tag=AC00_2028 NZ_JJLU01000066.1 Protein Homology CDS 162285 162896 . - 0 ID=cds-WP_000580323.1;Parent=gene-AC00_RS14670;Dbxref=GenBank:WP_000580323.1;Name=WP_000580323.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=AC00_RS14670;product=Holliday junction branch migration protein RuvA;protein_id=WP_000580323.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 163035 163100 . - . ID=gene-AC00_RS29545;Name=yobI;gbkey=Gene;gene=yobI;gene_biotype=protein_coding;locus_tag=AC00_RS29545 NZ_JJLU01000066.1 Protein Homology CDS 163035 163100 . - 0 ID=cds-WP_010723105.1;Parent=gene-AC00_RS29545;Dbxref=GenBank:WP_010723105.1;Name=WP_010723105.1;gbkey=CDS;gene=yobI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791244.1;locus_tag=AC00_RS29545;product=stress response small protein YobI;protein_id=WP_010723105.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 163171 163773 . + . ID=gene-AC00_RS14665;Name=yebB;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=AC00_RS14665;old_locus_tag=AC00_2029 NZ_JJLU01000066.1 Protein Homology CDS 163171 163773 . + 0 ID=cds-WP_032281036.1;Parent=gene-AC00_RS14665;Dbxref=GenBank:WP_032281036.1;Name=WP_032281036.1;gbkey=CDS;gene=yebB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416376.2;locus_tag=AC00_RS14665;product=YebB family permuted papain-like enzyme;protein_id=WP_032281036.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 163775 164296 . - . ID=gene-AC00_RS14660;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AC00_RS14660;old_locus_tag=AC00_2030 NZ_JJLU01000066.1 Protein Homology CDS 163775 164296 . - 0 ID=cds-WP_001295503.1;Parent=gene-AC00_RS14660;Dbxref=GenBank:WP_001295503.1;Name=WP_001295503.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=AC00_RS14660;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_001295503.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 164331 165071 . - . ID=gene-AC00_RS14655;Name=yebC;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=AC00_RS14655;old_locus_tag=AC00_2031 NZ_JJLU01000066.1 Protein Homology CDS 164331 165071 . - 0 ID=cds-WP_000907248.1;Parent=gene-AC00_RS14655;Dbxref=GenBank:WP_000907248.1;Name=WP_000907248.1;gbkey=CDS;gene=yebC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=AC00_RS14655;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000907248.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 165100 165552 . - . ID=gene-AC00_RS14650;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=AC00_RS14650;old_locus_tag=AC00_2032 NZ_JJLU01000066.1 Protein Homology CDS 165100 165552 . - 0 ID=cds-WP_001300367.1;Parent=gene-AC00_RS14650;Dbxref=GenBank:WP_001300367.1;Name=WP_001300367.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416379.1;locus_tag=AC00_RS14650;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_001300367.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 165670 167442 . - . ID=gene-AC00_RS14645;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AC00_RS14645;old_locus_tag=AC00_2033 NZ_JJLU01000066.1 Protein Homology CDS 165670 167442 . - 0 ID=cds-WP_001258662.1;Parent=gene-AC00_RS14645;Dbxref=GenBank:WP_001258662.1;Name=WP_001258662.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416380.1;locus_tag=AC00_RS14645;product=aspartate--tRNA ligase;protein_id=WP_001258662.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 167752 168318 . + . ID=gene-AC00_RS14640;Name=yecD;gbkey=Gene;gene=yecD;gene_biotype=protein_coding;locus_tag=AC00_RS14640;old_locus_tag=AC00_2034 NZ_JJLU01000066.1 Protein Homology CDS 167752 168318 . + 0 ID=cds-WP_000891620.1;Parent=gene-AC00_RS14640;Dbxref=GenBank:WP_000891620.1;Name=WP_000891620.1;gbkey=CDS;gene=yecD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416381.2;locus_tag=AC00_RS14640;product=hydrolase;protein_id=WP_000891620.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 168315 169133 . + . ID=gene-AC00_RS14635;Name=yecE;gbkey=Gene;gene=yecE;gene_biotype=protein_coding;locus_tag=AC00_RS14635;old_locus_tag=AC00_2035 NZ_JJLU01000066.1 Protein Homology CDS 168315 169133 . + 0 ID=cds-WP_032281037.1;Parent=gene-AC00_RS14635;Dbxref=GenBank:WP_032281037.1;Name=WP_032281037.1;gbkey=CDS;gene=yecE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=AC00_RS14635;product=DUF72 domain-containing protein;protein_id=WP_032281037.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 169186 169581 . + . ID=gene-AC00_RS14630;Name=yecN;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=AC00_RS14630;old_locus_tag=AC00_2036 NZ_JJLU01000066.1 Protein Homology CDS 169186 169581 . + 0 ID=cds-WP_000252980.1;Parent=gene-AC00_RS14630;Dbxref=GenBank:WP_000252980.1;Name=WP_000252980.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yecN;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310606.2;locus_tag=AC00_RS14630;product=MAPEG family protein;protein_id=WP_000252980.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 169622 170365 . + . ID=gene-AC00_RS14625;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=AC00_RS14625;old_locus_tag=AC00_2037 NZ_JJLU01000066.1 Protein Homology CDS 169622 170365 . + 0 ID=cds-WP_000019588.1;Parent=gene-AC00_RS14625;Dbxref=GenBank:WP_000019588.1;Name=WP_000019588.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=AC00_RS14625;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_000019588.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 170362 171333 . + . ID=gene-AC00_RS14620;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=AC00_RS14620;old_locus_tag=AC00_2038 NZ_JJLU01000066.1 Protein Homology CDS 170362 171333 . + 0 ID=cds-WP_000564727.1;Parent=gene-AC00_RS14620;Dbxref=GenBank:WP_000564727.1;Name=WP_000564727.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416385.1;locus_tag=AC00_RS14620;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_000564727.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 171498 173927 . - . ID=gene-AC00_RS14615;Name=torZ;gbkey=Gene;gene=torZ;gene_biotype=protein_coding;locus_tag=AC00_RS14615;old_locus_tag=AC00_2039 NZ_JJLU01000066.1 Protein Homology CDS 171498 173927 . - 0 ID=cds-WP_032281038.1;Parent=gene-AC00_RS14615;Dbxref=GenBank:WP_032281038.1;Name=WP_032281038.1;gbkey=CDS;gene=torZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310609.2;locus_tag=AC00_RS14615;product=trimethylamine N-oxide reductase TorZ;protein_id=WP_032281038.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 173952 175052 . - . ID=gene-AC00_RS14610;Name=torY;gbkey=Gene;gene=torY;gene_biotype=protein_coding;locus_tag=AC00_RS14610;old_locus_tag=AC00_2040 NZ_JJLU01000066.1 Protein Homology CDS 173952 175052 . - 0 ID=cds-WP_001214275.1;Parent=gene-AC00_RS14610;Dbxref=GenBank:WP_001214275.1;Name=WP_001214275.1;gbkey=CDS;gene=torY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310610.1;locus_tag=AC00_RS14610;product=NapC/NirT family cytochrome c;protein_id=WP_001214275.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 175440 176186 . - . ID=gene-AC00_RS14605;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=AC00_RS14605;old_locus_tag=AC00_2041 NZ_JJLU01000066.1 Protein Homology CDS 175440 176186 . - 0 ID=cds-WP_021556903.1;Parent=gene-AC00_RS14605;Dbxref=GenBank:WP_021556903.1;Name=WP_021556903.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310611.2;locus_tag=AC00_RS14605;product=copper homeostasis protein CutC;protein_id=WP_021556903.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 176200 176766 . - . ID=gene-AC00_RS14600;Name=yecM;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=AC00_RS14600;old_locus_tag=AC00_2042 NZ_JJLU01000066.1 Protein Homology CDS 176200 176766 . - 0 ID=cds-WP_032281042.1;Parent=gene-AC00_RS14600;Dbxref=GenBank:WP_032281042.1;Name=WP_032281042.1;gbkey=CDS;gene=yecM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310612.2;locus_tag=AC00_RS14600;product=VOC family protein;protein_id=WP_032281042.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 176982 178715 . + . ID=gene-AC00_RS14595;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AC00_RS14595;old_locus_tag=AC00_2043 NZ_JJLU01000066.1 Protein Homology CDS 176982 178715 . + 0 ID=cds-WP_021556904.1;Parent=gene-AC00_RS14595;Dbxref=GenBank:WP_021556904.1;Name=WP_021556904.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=AC00_RS14595;product=arginine--tRNA ligase;protein_id=WP_021556904.1;transl_table=11 NZ_JJLU01000066.1 RefSeq gene 178757 178801 . - . ID=gene-AC00_RS31215;Name=AC00_RS31215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31215 NZ_JJLU01000066.1 Protein Homology CDS 178757 178801 . - 0 ID=cds-WP_212734366.1;Parent=gene-AC00_RS31215;Dbxref=GenBank:WP_212734366.1;Name=WP_212734366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051188.1;locus_tag=AC00_RS31215;product=hypothetical protein;protein_id=WP_212734366.1;transl_table=11 NZ_JJLU01000066.1 RefSeq pseudogene 178892 179056 . + . ID=gene-AC00_RS29550;Name=AC00_RS29550;end_range=179056,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29550;old_locus_tag=AC00_2044;partial=true;pseudo=true NZ_JJLU01000066.1 Protein Homology CDS 178892 179056 . + 0 ID=cds-AC00_RS29550;Parent=gene-AC00_RS29550;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=179056,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707765.1;locus_tag=AC00_RS29550;partial=true;product=lysozyme inhibitor LprI family protein;pseudo=true;transl_table=11 NZ_JJLU01000066.1 RefSeq pseudogene 179073 179444 . - . ID=gene-AC00_RS14590;Name=AC00_RS14590;end_range=179444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS14590;old_locus_tag=AC00_2045;partial=true;pseudo=true NZ_JJLU01000066.1 Protein Homology CDS 179073 179444 . - 0 ID=cds-AC00_RS14590;Parent=gene-AC00_RS14590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=179444,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS14590;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000067.1 1 3445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000067.1 RefSeq region 1 3445 . + . ID=NZ_JJLU01000067.1:1..3445;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000067.1 RefSeq pseudogene 1 156 . - . ID=gene-AC00_RS30320;Name=AC00_RS30320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30320;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000067.1 Protein Homology CDS 1 156 . - 0 ID=cds-AC00_RS30320;Parent=gene-AC00_RS30320;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AC00_RS30320;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000067.1 RefSeq pseudogene 306 482 . + . ID=gene-AC00_RS31220;Name=AC00_RS31220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31220;old_locus_tag=AC00_2046;partial=true;pseudo=true;start_range=.,306 NZ_JJLU01000067.1 Protein Homology CDS 306 482 . + 0 ID=cds-AC00_RS31220;Parent=gene-AC00_RS31220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AC00_RS31220;partial=true;product=tail fiber assembly protein;pseudo=true;start_range=.,306;transl_table=11 NZ_JJLU01000067.1 RefSeq pseudogene 579 848 . + . ID=gene-AC00_RS31730;Name=AC00_RS31730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31730;partial=true;pseudo=true;start_range=.,579 NZ_JJLU01000067.1 Protein Homology CDS 579 848 . + 0 ID=cds-AC00_RS31730;Parent=gene-AC00_RS31730;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000701868.1;locus_tag=AC00_RS31730;partial=true;product=DUF4376 domain-containing protein;pseudo=true;start_range=.,579;transl_table=11 NZ_JJLU01000067.1 RefSeq pseudogene 1070 1195 . + . ID=gene-AC00_RS27680;Name=AC00_RS27680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27680;partial=true;pseudo=true;start_range=.,1070 NZ_JJLU01000067.1 Protein Homology CDS 1070 1195 . + 0 ID=cds-AC00_RS27680;Parent=gene-AC00_RS27680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=AC00_RS27680;partial=true;product=OmpW family outer membrane protein;pseudo=true;start_range=.,1070;transl_table=11 NZ_JJLU01000067.1 RefSeq gene 1255 1761 . - . ID=gene-AC00_RS14575;Name=yciE;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=AC00_RS14575;old_locus_tag=AC00_2048 NZ_JJLU01000067.1 Protein Homology CDS 1255 1761 . - 0 ID=cds-WP_032280895.1;Parent=gene-AC00_RS14575;Dbxref=GenBank:WP_032280895.1;Name=WP_032280895.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309856.1;locus_tag=AC00_RS14575;product=ferritin-like domain-containing protein;protein_id=WP_032280895.1;transl_table=11 NZ_JJLU01000067.1 RefSeq gene 1807 2307 . - . ID=gene-AC00_RS14570;Name=yciF;gbkey=Gene;gene=yciF;gene_biotype=protein_coding;locus_tag=AC00_RS14570;old_locus_tag=AC00_2049 NZ_JJLU01000067.1 Protein Homology CDS 1807 2307 . - 0 ID=cds-WP_001056491.1;Parent=gene-AC00_RS14570;Dbxref=GenBank:WP_001056491.1;Name=WP_001056491.1;Ontology_term=GO:0046872;gbkey=CDS;gene=yciF;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309857.1;locus_tag=AC00_RS14570;product=ferritin-like domain-containing protein;protein_id=WP_001056491.1;transl_table=11 NZ_JJLU01000067.1 RefSeq gene 2393 2572 . - . ID=gene-AC00_RS14565;Name=yciG;gbkey=Gene;gene=yciG;gene_biotype=protein_coding;locus_tag=AC00_RS14565;old_locus_tag=AC00_2050 NZ_JJLU01000067.1 Protein Homology CDS 2393 2572 . - 0 ID=cds-WP_021556734.1;Parent=gene-AC00_RS14565;Dbxref=GenBank:WP_021556734.1;Name=WP_021556734.1;Ontology_term=GO:0006950;gbkey=CDS;gene=yciG;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309858.2;locus_tag=AC00_RS14565;product=general stress protein;protein_id=WP_021556734.1;transl_table=11 NZ_JJLU01000067.1 RefSeq pseudogene 2883 3445 . + . ID=gene-AC00_RS14560;Name=AC00_RS14560;end_range=3445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS14560;old_locus_tag=AC00_2051;partial=true;pseudo=true NZ_JJLU01000067.1 Protein Homology CDS 2883 3445 . + 0 ID=cds-AC00_RS14560;Parent=gene-AC00_RS14560;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3445,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS14560;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000068.1 1 31645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000068.1 RefSeq region 1 31645 . + . ID=NZ_JJLU01000068.1:1..31645;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000068.1 RefSeq gene 1 232 . - . ID=gene-AC00_RS0124730;Name=AC00_RS0124730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124730;old_locus_tag=AC00_2052;partial=true;start_range=.,1 NZ_JJLU01000068.1 Protein Homology CDS 1 232 . - 0 ID=cds-WP_001397795.1-3;Parent=gene-AC00_RS0124730;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124730;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;start_range=.,1;transl_table=11 NZ_JJLU01000068.1 RefSeq pseudogene 287 619 . + . ID=gene-AC00_RS0124735;Name=AC00_RS0124735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124735;partial=true;pseudo=true;start_range=.,287 NZ_JJLU01000068.1 Protein Homology CDS 287 619 . + 0 ID=cds-AC00_RS0124735;Parent=gene-AC00_RS0124735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310614.1;locus_tag=AC00_RS0124735;partial=true;product=lysozyme inhibitor LprI family protein;pseudo=true;start_range=.,287;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 741 1133 . - . ID=gene-AC00_RS0124740;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=AC00_RS0124740 NZ_JJLU01000068.1 Protein Homology CDS 741 1133 . - 0 ID=cds-WP_001202071.1;Parent=gene-AC00_RS0124740;Dbxref=GenBank:WP_001202071.1;Name=WP_001202071.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=AC00_RS0124740;product=flagellar protein FlhE;protein_id=WP_001202071.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 1133 3211 . - . ID=gene-AC00_RS14555;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AC00_RS14555;old_locus_tag=AC00_2054 NZ_JJLU01000068.1 Protein Homology CDS 1133 3211 . - 0 ID=cds-WP_032281051.1;Parent=gene-AC00_RS14555;Dbxref=GenBank:WP_032281051.1;Name=WP_032281051.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416393.1;locus_tag=AC00_RS14555;product=flagellar biosynthesis protein FlhA;protein_id=WP_032281051.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 3204 4352 . - . ID=gene-AC00_RS14550;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=AC00_RS14550;old_locus_tag=AC00_2055 NZ_JJLU01000068.1 Protein Homology CDS 3204 4352 . - 0 ID=cds-WP_001278954.1;Parent=gene-AC00_RS14550;Dbxref=GenBank:WP_001278954.1;Name=WP_001278954.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416394.1;locus_tag=AC00_RS14550;product=flagellar biosynthesis protein FlhB;protein_id=WP_001278954.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 4554 5198 . - . ID=gene-AC00_RS14545;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=AC00_RS14545;old_locus_tag=AC00_2057 NZ_JJLU01000068.1 Protein Homology CDS 4554 5198 . - 0 ID=cds-WP_000983609.1;Parent=gene-AC00_RS14545;Dbxref=GenBank:WP_000983609.1;Name=WP_000983609.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416395.1;locus_tag=AC00_RS14545;product=protein phosphatase CheZ;protein_id=WP_000983609.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 5209 5598 . - . ID=gene-AC00_RS14540;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=AC00_RS14540;old_locus_tag=AC00_2058 NZ_JJLU01000068.1 Protein Homology CDS 5209 5598 . - 0 ID=cds-WP_000763871.1;Parent=gene-AC00_RS14540;Dbxref=GenBank:WP_000763871.1;Name=WP_000763871.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=AC00_RS14540;product=chemotaxis response regulator CheY;protein_id=WP_000763871.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 5613 6662 . - . ID=gene-AC00_RS14535;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=AC00_RS14535;old_locus_tag=AC00_2059 NZ_JJLU01000068.1 Protein Homology CDS 5613 6662 . - 0 ID=cds-WP_000036371.1;Parent=gene-AC00_RS14535;Dbxref=GenBank:WP_000036371.1;Name=WP_000036371.1;gbkey=CDS;gene=cheB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=AC00_RS14535;product=protein-glutamate methylesterase/protein glutamine deamidase;protein_id=WP_000036371.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 6665 7525 . - . ID=gene-AC00_RS14530;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=AC00_RS14530;old_locus_tag=AC00_2060 NZ_JJLU01000068.1 Protein Homology CDS 6665 7525 . - 0 ID=cds-WP_000204337.1;Parent=gene-AC00_RS14530;Dbxref=GenBank:WP_000204337.1;Name=WP_000204337.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416398.1;locus_tag=AC00_RS14530;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_000204337.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 7544 9145 . - . ID=gene-AC00_RS14525;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AC00_RS14525;old_locus_tag=AC00_2061 NZ_JJLU01000068.1 Protein Homology CDS 7544 9145 . - 0 ID=cds-WP_021513093.1;Parent=gene-AC00_RS14525;Dbxref=GenBank:WP_021513093.1;Name=WP_021513093.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310622.1;locus_tag=AC00_RS14525;product=methyl-accepting chemotaxis protein IV;protein_id=WP_021513093.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 9191 10852 . - . ID=gene-AC00_RS14520;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=AC00_RS14520;old_locus_tag=AC00_2062 NZ_JJLU01000068.1 Protein Homology CDS 9191 10852 . - 0 ID=cds-WP_032281052.1;Parent=gene-AC00_RS14520;Dbxref=GenBank:WP_032281052.1;Name=WP_032281052.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416400.1;locus_tag=AC00_RS14520;product=methyl-accepting chemotaxis protein II;protein_id=WP_032281052.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 10997 11500 . - . ID=gene-AC00_RS14515;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=AC00_RS14515;old_locus_tag=AC00_2063 NZ_JJLU01000068.1 Protein Homology CDS 10997 11500 . - 0 ID=cds-WP_000147302.1;Parent=gene-AC00_RS14515;Dbxref=GenBank:WP_000147302.1;Name=WP_000147302.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310624.1;locus_tag=AC00_RS14515;product=chemotaxis protein CheW;protein_id=WP_000147302.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 11521 13485 . - . ID=gene-AC00_RS14510;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=AC00_RS14510;old_locus_tag=AC00_2064 NZ_JJLU01000068.1 Protein Homology CDS 11521 13485 . - 0 ID=cds-WP_072163491.1;Parent=gene-AC00_RS14510;Dbxref=GenBank:WP_072163491.1;Name=WP_072163491.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310625.1;locus_tag=AC00_RS14510;product=chemotaxis protein CheA;protein_id=WP_072163491.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 13490 14416 . - . ID=gene-AC00_RS14505;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=AC00_RS14505;old_locus_tag=AC00_2065 NZ_JJLU01000068.1 Protein Homology CDS 13490 14416 . - 0 ID=cds-WP_000795622.1;Parent=gene-AC00_RS14505;Dbxref=GenBank:WP_000795622.1;Name=WP_000795622.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310626.1;locus_tag=AC00_RS14505;product=flagellar motor protein MotB;protein_id=WP_000795622.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 14413 15300 . - . ID=gene-AC00_RS14500;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=AC00_RS14500;old_locus_tag=AC00_2066 NZ_JJLU01000068.1 Protein Homology CDS 14413 15300 . - 0 ID=cds-WP_032281054.1;Parent=gene-AC00_RS14500;Dbxref=GenBank:WP_032281054.1;Name=WP_032281054.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310627.1;locus_tag=AC00_RS14500;product=flagellar motor stator protein MotA;protein_id=WP_032281054.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 15427 16005 . - . ID=gene-AC00_RS14495;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=AC00_RS14495;old_locus_tag=AC00_2067 NZ_JJLU01000068.1 Protein Homology CDS 15427 16005 . - 0 ID=cds-WP_001291603.1;Parent=gene-AC00_RS14495;Dbxref=GenBank:WP_001291603.1;Name=WP_001291603.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310628.1;locus_tag=AC00_RS14495;product=flagellar transcriptional regulator FlhC;protein_id=WP_001291603.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 16008 16358 . - . ID=gene-AC00_RS14490;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=AC00_RS14490;old_locus_tag=AC00_2068 NZ_JJLU01000068.1 Protein Homology CDS 16008 16358 . - 0 ID=cds-WP_001295647.1;Parent=gene-AC00_RS14490;Dbxref=GenBank:WP_001295647.1;Name=WP_001295647.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416406.4;locus_tag=AC00_RS14490;product=flagellar transcriptional regulator FlhD;protein_id=WP_001295647.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 17138 17566 . + . ID=gene-AC00_RS14485;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=AC00_RS14485;old_locus_tag=AC00_2069 NZ_JJLU01000068.1 Protein Homology CDS 17138 17566 . + 0 ID=cds-WP_000122432.1;Parent=gene-AC00_RS14485;Dbxref=GenBank:WP_000122432.1;Name=WP_000122432.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310630.1;locus_tag=AC00_RS14485;product=universal stress protein UspC;protein_id=WP_000122432.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 17573 18997 . - . ID=gene-AC00_RS14480;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=AC00_RS14480;old_locus_tag=AC00_2070 NZ_JJLU01000068.1 Protein Homology CDS 17573 18997 . - 0 ID=cds-WP_001295646.1;Parent=gene-AC00_RS14480;Dbxref=GenBank:WP_001295646.1;Name=WP_001295646.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416410.1;locus_tag=AC00_RS14480;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_001295646.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 18972 19772 . - . ID=gene-AC00_RS14475;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=AC00_RS14475;old_locus_tag=AC00_2071 NZ_JJLU01000068.1 Protein Homology CDS 18972 19772 . - 0 ID=cds-WP_032281055.1;Parent=gene-AC00_RS14475;Dbxref=GenBank:WP_032281055.1;Name=WP_032281055.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310632.1;locus_tag=AC00_RS14475;product=trehalose-phosphatase;protein_id=WP_032281055.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 19939 20925 . - . ID=gene-AC00_RS14470;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=AC00_RS14470;old_locus_tag=AC00_2072 NZ_JJLU01000068.1 Protein Homology CDS 19939 20925 . - 0 ID=cds-WP_000100205.1;Parent=gene-AC00_RS14470;Dbxref=GenBank:WP_000100205.1;Name=WP_000100205.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=AC00_RS14470;product=arabinose ABC transporter permease AraH;protein_id=WP_000100205.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 20940 22454 . - . ID=gene-AC00_RS14465;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=AC00_RS14465;old_locus_tag=AC00_2073 NZ_JJLU01000068.1 Protein Homology CDS 20940 22454 . - 0 ID=cds-WP_001474364.1;Parent=gene-AC00_RS14465;Dbxref=GenBank:WP_001474364.1;Name=WP_001474364.1;gbkey=CDS;gene=araG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=AC00_RS14465;product=arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_001474364.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 22524 23513 . - . ID=gene-AC00_RS14460;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=AC00_RS14460;old_locus_tag=AC00_2074 NZ_JJLU01000068.1 Protein Homology CDS 22524 23513 . - 0 ID=cds-WP_000548675.1;Parent=gene-AC00_RS14460;Dbxref=GenBank:WP_000548675.1;Name=WP_000548675.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=AC00_RS14460;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_000548675.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 24310 24813 . + . ID=gene-AC00_RS14455;Name=ftnB;gbkey=Gene;gene=ftnB;gene_biotype=protein_coding;locus_tag=AC00_RS14455;old_locus_tag=AC00_2075 NZ_JJLU01000068.1 Protein Homology CDS 24310 24813 . + 0 ID=cds-WP_000179469.1;Parent=gene-AC00_RS14455;Dbxref=GenBank:WP_000179469.1;Name=WP_000179469.1;gbkey=CDS;gene=ftnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310637.1;locus_tag=AC00_RS14455;product=non-heme ferritin-like protein;protein_id=WP_000179469.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 24892 25143 . - . ID=gene-AC00_RS14450;Name=yecJ;gbkey=Gene;gene=yecJ;gene_biotype=protein_coding;locus_tag=AC00_RS14450;old_locus_tag=AC00_2076 NZ_JJLU01000068.1 Protein Homology CDS 24892 25143 . - 0 ID=cds-WP_000082127.1;Parent=gene-AC00_RS14450;Dbxref=GenBank:WP_000082127.1;Name=WP_000082127.1;gbkey=CDS;gene=yecJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=AC00_RS14450;product=DUF2766 family protein YecJ;protein_id=WP_000082127.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 25258 25344 . - . ID=gene-AC00_RS29560;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=AC00_RS29560 NZ_JJLU01000068.1 Protein Homology CDS 25258 25344 . - 0 ID=cds-WP_010723106.1;Parent=gene-AC00_RS29560;Dbxref=GenBank:WP_010723106.1;Name=WP_010723106.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=AC00_RS29560;product=stress response protein AzuC;protein_id=WP_010723106.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 25607 25930 . + . ID=gene-AC00_RS0124745;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=AC00_RS0124745;old_locus_tag=AC00_2079 NZ_JJLU01000068.1 Protein Homology CDS 25607 25930 . + 0 ID=cds-WP_001237866.1;Parent=gene-AC00_RS0124745;Dbxref=GenBank:WP_001237866.1;Name=WP_001237866.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707794.1;locus_tag=AC00_RS0124745;product=YecR-like lipofamily protein;protein_id=WP_001237866.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 26101 26598 . + . ID=gene-AC00_RS14440;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=AC00_RS14440;old_locus_tag=AC00_2081 NZ_JJLU01000068.1 Protein Homology CDS 26101 26598 . + 0 ID=cds-WP_000917208.1;Parent=gene-AC00_RS14440;Dbxref=GenBank:WP_000917208.1;Name=WP_000917208.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310640.1;locus_tag=AC00_RS14440;product=non-heme ferritin;protein_id=WP_000917208.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 26636 26875 . - . ID=gene-AC00_RS14435;Name=yecH;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=AC00_RS14435;old_locus_tag=AC00_2082 NZ_JJLU01000068.1 Protein Homology CDS 26636 26875 . - 0 ID=cds-WP_032281056.1;Parent=gene-AC00_RS14435;Dbxref=GenBank:WP_032281056.1;Name=WP_032281056.1;gbkey=CDS;gene=yecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310641.1;locus_tag=AC00_RS14435;product=YecH family metal-binding protein;protein_id=WP_032281056.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 27067 28278 . + . ID=gene-AC00_RS14430;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=AC00_RS14430;old_locus_tag=AC00_2083 NZ_JJLU01000068.1 Protein Homology CDS 27067 28278 . + 0 ID=cds-WP_032281057.1;Parent=gene-AC00_RS14430;Dbxref=GenBank:WP_032281057.1;Name=WP_032281057.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310642.1;locus_tag=AC00_RS14430;product=tyrosine transporter TyrP;protein_id=WP_032281057.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 28340 29005 . - . ID=gene-AC00_RS14425;Name=yecA;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=AC00_RS14425;old_locus_tag=AC00_2084 NZ_JJLU01000068.1 Protein Homology CDS 28340 29005 . - 0 ID=cds-WP_000847882.1;Parent=gene-AC00_RS14425;Dbxref=GenBank:WP_000847882.1;Name=WP_000847882.1;gbkey=CDS;gene=yecA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310643.1;locus_tag=AC00_RS14425;product=UPF0149 family protein YecA;protein_id=WP_000847882.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 29363 30364 . - . ID=gene-AC00_RS14420;Name=AC00_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14420;old_locus_tag=AC00_2085 NZ_JJLU01000068.1 Protein Homology CDS 29363 30364 . - 0 ID=cds-WP_001342226.1;Parent=gene-AC00_RS14420;Dbxref=GenBank:WP_001342226.1;Name=WP_001342226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310644.1;locus_tag=AC00_RS14420;product=phage integrase;protein_id=WP_001342226.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 30370 30717 . - . ID=gene-AC00_RS0124750;Name=AC00_RS0124750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124750 NZ_JJLU01000068.1 Protein Homology CDS 30370 30717 . - 0 ID=cds-WP_000865208.1;Parent=gene-AC00_RS0124750;Dbxref=GenBank:WP_000865208.1;Name=WP_000865208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310645.1;locus_tag=AC00_RS0124750;product=DUF2511 domain-containing protein;protein_id=WP_000865208.1;transl_table=11 NZ_JJLU01000068.1 RefSeq gene 30747 31331 . - . ID=gene-AC00_RS14415;Name=AC00_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14415;old_locus_tag=AC00_2087 NZ_JJLU01000068.1 Protein Homology CDS 30747 31331 . - 0 ID=cds-WP_420197082.1;Parent=gene-AC00_RS14415;Dbxref=GenBank:WP_420197082.1;Name=WP_420197082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310646.1;locus_tag=AC00_RS14415;product=hypothetical protein;protein_id=WP_420197082.1;transl_table=11 NZ_JJLU01000068.1 RefSeq pseudogene 31341 31645 . - . ID=gene-AC00_RS14410;Name=AC00_RS14410;end_range=31645,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS14410;old_locus_tag=AC00_2088;partial=true;pseudo=true NZ_JJLU01000068.1 Protein Homology CDS 31341 31645 . - 2 ID=cds-AC00_RS14410;Parent=gene-AC00_RS14410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=31645,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS14410;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000069.1 1 98662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000069.1 RefSeq region 1 98662 . + . ID=NZ_JJLU01000069.1:1..98662;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000069.1 RefSeq gene 1 200 . - . ID=gene-AC00_RS14405;Name=AC00_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14405;old_locus_tag=AC00_2089;partial=true;start_range=.,1 NZ_JJLU01000069.1 Protein Homology CDS 1 200 . - 0 ID=cds-WP_000179200.1;Parent=gene-AC00_RS14405;Dbxref=GenBank:WP_000179200.1;Name=WP_000179200.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS14405;partial=true;product=IS1 family transposase;protein_id=WP_000179200.1;start_range=.,1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 263 682 . - . ID=gene-AC00_RS0124755;Name=AC00_RS0124755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124755 NZ_JJLU01000069.1 Protein Homology CDS 263 682 . - 0 ID=cds-WP_000362153.1;Parent=gene-AC00_RS0124755;Dbxref=GenBank:WP_000362153.1;Name=WP_000362153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000362153.1;locus_tag=AC00_RS0124755;product=hypothetical protein;protein_id=WP_000362153.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 783 1064 . + . ID=gene-AC00_RS0124760;Name=AC00_RS0124760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124760 NZ_JJLU01000069.1 Protein Homology CDS 783 1064 . + 0 ID=cds-WP_000391950.1;Parent=gene-AC00_RS0124760;Dbxref=GenBank:WP_000391950.1;Name=WP_000391950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391949.1;locus_tag=AC00_RS0124760;product=transcriptional regulator;protein_id=WP_000391950.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 1048 1473 . + . ID=gene-AC00_RS14400;Name=AC00_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14400;old_locus_tag=AC00_2091 NZ_JJLU01000069.1 Protein Homology CDS 1048 1473 . + 0 ID=cds-WP_000693888.1;Parent=gene-AC00_RS14400;Dbxref=GenBank:WP_000693888.1;Name=WP_000693888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310304.1;locus_tag=AC00_RS14400;product=toxin YdaT family protein;protein_id=WP_000693888.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 1496 2458 . + . ID=gene-AC00_RS14395;Name=AC00_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14395;old_locus_tag=AC00_2092 NZ_JJLU01000069.1 Protein Homology CDS 1496 2458 . + 0 ID=cds-WP_000095673.1;Parent=gene-AC00_RS14395;Dbxref=GenBank:WP_000095673.1;Name=WP_000095673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310303.2;locus_tag=AC00_RS14395;product=helix-turn-helix domain-containing protein;protein_id=WP_000095673.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 2465 3211 . + . ID=gene-AC00_RS14390;Name=AC00_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14390;old_locus_tag=AC00_2093 NZ_JJLU01000069.1 Protein Homology CDS 2465 3211 . + 0 ID=cds-WP_000788950.1;Parent=gene-AC00_RS14390;Dbxref=GenBank:WP_000788950.1;Name=WP_000788950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309101.1;locus_tag=AC00_RS14390;product=ATP-binding protein;protein_id=WP_000788950.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 3233 4003 . + . ID=gene-AC00_RS14385;Name=AC00_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14385;old_locus_tag=AC00_2094 NZ_JJLU01000069.1 Protein Homology CDS 3233 4003 . + 0 ID=cds-WP_000450998.1;Parent=gene-AC00_RS14385;Dbxref=GenBank:WP_000450998.1;Name=WP_000450998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309102.1;locus_tag=AC00_RS14385;product=DUF1627 domain-containing protein;protein_id=WP_000450998.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 4019 4444 . + . ID=gene-AC00_RS14380;Name=AC00_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14380;old_locus_tag=AC00_2095 NZ_JJLU01000069.1 Protein Homology CDS 4019 4444 . + 0 ID=cds-WP_001151165.1;Parent=gene-AC00_RS14380;Dbxref=GenBank:WP_001151165.1;Name=WP_001151165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016232644.1;locus_tag=AC00_RS14380;product=DUF977 family protein;protein_id=WP_001151165.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 4619 5284 . + . ID=gene-AC00_RS14375;Name=AC00_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14375;old_locus_tag=AC00_2096 NZ_JJLU01000069.1 Protein Homology CDS 4619 5284 . + 0 ID=cds-WP_000150294.1;Parent=gene-AC00_RS14375;Dbxref=GenBank:WP_000150294.1;Name=WP_000150294.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235606.1;locus_tag=AC00_RS14375;product=epoxyqueuosine reductase QueH;protein_id=WP_000150294.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 5522 5677 . + . ID=gene-AC00_RS0124765;Name=hokD;gbkey=Gene;gene=hokD;gene_biotype=protein_coding;locus_tag=AC00_RS0124765 NZ_JJLU01000069.1 Protein Homology CDS 5522 5677 . + 0 ID=cds-WP_000813262.1;Parent=gene-AC00_RS0124765;Dbxref=GenBank:WP_000813262.1;Name=WP_000813262.1;gbkey=CDS;gene=hokD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416080.1;locus_tag=AC00_RS0124765;product=type I toxin-antitoxin system toxin HokD;protein_id=WP_000813262.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 5719 5898 . - . ID=gene-AC00_RS31625;Name=AC00_RS31625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31625;old_locus_tag=AC00_2097 NZ_JJLU01000069.1 Protein Homology CDS 5719 5898 . - 0 ID=cds-WP_001112736.1;Parent=gene-AC00_RS31625;Dbxref=GenBank:WP_001112736.1;Name=WP_001112736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112740.1;locus_tag=AC00_RS31625;product=hypothetical protein;protein_id=WP_001112736.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 5845 6117 . + . ID=gene-AC00_RS0124770;Name=AC00_RS0124770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124770 NZ_JJLU01000069.1 Protein Homology CDS 5845 6117 . + 0 ID=cds-WP_001329966.1;Parent=gene-AC00_RS0124770;Dbxref=GenBank:WP_001329966.1;Name=WP_001329966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940925.1;locus_tag=AC00_RS0124770;product=hypothetical protein;protein_id=WP_001329966.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 6119 7174 . + . ID=gene-AC00_RS14365;Name=AC00_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14365;old_locus_tag=AC00_2098 NZ_JJLU01000069.1 Protein Homology CDS 6119 7174 . + 0 ID=cds-WP_032202792.1;Parent=gene-AC00_RS14365;Dbxref=GenBank:WP_032202792.1;Name=WP_032202792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265086.1;locus_tag=AC00_RS14365;product=DUF968 domain-containing protein;protein_id=WP_032202792.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 7175 7540 . + . ID=gene-AC00_RS14360;Name=AC00_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14360;old_locus_tag=AC00_2099 NZ_JJLU01000069.1 Protein Homology CDS 7175 7540 . + 0 ID=cds-WP_000140035.1;Parent=gene-AC00_RS14360;Dbxref=GenBank:WP_000140035.1;Name=WP_000140035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001718110.1;locus_tag=AC00_RS14360;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_000140035.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 7537 8226 . + . ID=gene-AC00_RS14355;Name=AC00_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14355;old_locus_tag=AC00_2100 NZ_JJLU01000069.1 Protein Homology CDS 7537 8226 . + 0 ID=cds-WP_001064916.1;Parent=gene-AC00_RS14355;Dbxref=GenBank:WP_001064916.1;Name=WP_001064916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310294.1;locus_tag=AC00_RS14355;product=bacteriophage antitermination protein Q;protein_id=WP_001064916.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 8440 8637 . + . ID=gene-AC00_RS14350;Name=AC00_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14350;old_locus_tag=AC00_2101 NZ_JJLU01000069.1 Protein Homology CDS 8440 8637 . + 0 ID=cds-WP_000917768.1;Parent=gene-AC00_RS14350;Dbxref=GenBank:WP_000917768.1;Name=WP_000917768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309806.2;locus_tag=AC00_RS14350;product=hypothetical protein;protein_id=WP_000917768.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 8788 9837 . + . ID=gene-AC00_RS14345;Name=AC00_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14345;old_locus_tag=AC00_2102 NZ_JJLU01000069.1 Protein Homology CDS 8788 9837 . + 0 ID=cds-WP_000935536.1;Parent=gene-AC00_RS14345;Dbxref=GenBank:WP_000935536.1;Name=WP_000935536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575625.1;locus_tag=AC00_RS14345;product=DNA-methyltransferase;protein_id=WP_000935536.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 9887 9962 . + . ID=gene-AC00_RS14340;Name=AC00_RS14340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS14340;old_locus_tag=AC00_2103 NZ_JJLU01000069.1 tRNAscan-SE tRNA 9887 9962 . + . ID=rna-AC00_RS14340;Parent=gene-AC00_RS14340;anticodon=(pos:9920..9922);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14340;product=tRNA-Ile NZ_JJLU01000069.1 tRNAscan-SE exon 9887 9962 . + . ID=exon-AC00_RS14340-1;Parent=rna-AC00_RS14340;anticodon=(pos:9920..9922);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14340;product=tRNA-Ile NZ_JJLU01000069.1 RefSeq gene 9970 10046 . + . ID=gene-AC00_RS0124775;Name=AC00_RS0124775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS0124775 NZ_JJLU01000069.1 tRNAscan-SE tRNA 9970 10046 . + . ID=rna-AC00_RS0124775;Parent=gene-AC00_RS0124775;anticodon=(pos:10004..10006);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS0124775;product=tRNA-Arg NZ_JJLU01000069.1 tRNAscan-SE exon 9970 10046 . + . ID=exon-AC00_RS0124775-1;Parent=rna-AC00_RS0124775;anticodon=(pos:10004..10006);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS0124775;product=tRNA-Arg NZ_JJLU01000069.1 RefSeq gene 10060 10136 . + . ID=gene-AC00_RS14335;Name=AC00_RS14335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS14335;old_locus_tag=AC00_2104 NZ_JJLU01000069.1 tRNAscan-SE tRNA 10060 10136 . + . ID=rna-AC00_RS14335;Parent=gene-AC00_RS14335;anticodon=(pos:10094..10096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14335;product=tRNA-Arg NZ_JJLU01000069.1 tRNAscan-SE exon 10060 10136 . + . ID=exon-AC00_RS14335-1;Parent=rna-AC00_RS14335;anticodon=(pos:10094..10096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14335;product=tRNA-Arg NZ_JJLU01000069.1 RefSeq pseudogene 10230 10355 . - . ID=gene-AC00_RS31225;Name=AC00_RS31225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31225;partial=true;pseudo=true;start_range=.,10230 NZ_JJLU01000069.1 Protein Homology CDS 10230 10355 . - 0 ID=cds-AC00_RS31225;Parent=gene-AC00_RS31225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013009199.1;locus_tag=AC00_RS31225;partial=true;product=hypothetical protein;pseudo=true;start_range=.,10230;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 11111 12964 . + . ID=gene-AC00_RS14330;Name=AC00_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14330;old_locus_tag=AC00_2105 NZ_JJLU01000069.1 Protein Homology CDS 11111 12964 . + 0 ID=cds-WP_032288213.1;Parent=gene-AC00_RS14330;Dbxref=GenBank:WP_032288213.1;Name=WP_032288213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310289.1;locus_tag=AC00_RS14330;product=SASA family carbohydrate esterase;protein_id=WP_032288213.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 12988 13455 . + . ID=gene-AC00_RS14325;Name=AC00_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14325;old_locus_tag=AC00_2106 NZ_JJLU01000069.1 Protein Homology CDS 12988 13455 . + 0 ID=cds-WP_001342220.1;Parent=gene-AC00_RS14325;Dbxref=GenBank:WP_001342220.1;Name=WP_001342220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920596.1;locus_tag=AC00_RS14325;product=phage tail protein;protein_id=WP_001342220.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 13448 14083 . + . ID=gene-AC00_RS14320;Name=AC00_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14320;old_locus_tag=AC00_2107 NZ_JJLU01000069.1 Protein Homology CDS 13448 14083 . + 0 ID=cds-WP_000356339.1;Parent=gene-AC00_RS14320;Dbxref=GenBank:WP_000356339.1;Name=WP_000356339.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000356302.1;locus_tag=AC00_RS14320;product=phage virion morphogenesis protein;protein_id=WP_000356339.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 14095 14661 . + . ID=gene-AC00_RS14315;Name=AC00_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14315;old_locus_tag=AC00_2108 NZ_JJLU01000069.1 Protein Homology CDS 14095 14661 . + 0 ID=cds-WP_001342219.1;Parent=gene-AC00_RS14315;Dbxref=GenBank:WP_001342219.1;Name=WP_001342219.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295912.1;locus_tag=AC00_RS14315;product=phage baseplate assembly protein V;protein_id=WP_001342219.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 14658 15008 . + . ID=gene-AC00_RS14310;Name=AC00_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14310;old_locus_tag=AC00_2109 NZ_JJLU01000069.1 Protein Homology CDS 14658 15008 . + 0 ID=cds-WP_000213447.1;Parent=gene-AC00_RS14310;Dbxref=GenBank:WP_000213447.1;Name=WP_000213447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213452.1;locus_tag=AC00_RS14310;product=GPW/gp25 family protein;protein_id=WP_000213447.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 15012 15908 . + . ID=gene-AC00_RS14305;Name=AC00_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14305;old_locus_tag=AC00_2110 NZ_JJLU01000069.1 Protein Homology CDS 15012 15908 . + 0 ID=cds-WP_032281061.1;Parent=gene-AC00_RS14305;Dbxref=GenBank:WP_032281061.1;Name=WP_032281061.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297572.1;locus_tag=AC00_RS14305;product=baseplate assembly protein;protein_id=WP_032281061.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 15901 16431 . + . ID=gene-AC00_RS14300;Name=AC00_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14300;old_locus_tag=AC00_2111 NZ_JJLU01000069.1 Protein Homology CDS 15901 16431 . + 0 ID=cds-WP_000071738.1;Parent=gene-AC00_RS14300;Dbxref=GenBank:WP_000071738.1;Name=WP_000071738.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000071700.1;locus_tag=AC00_RS14300;product=phage tail protein I;protein_id=WP_000071738.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 16434 18566 . + . ID=gene-AC00_RS31735;Name=AC00_RS31735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31735;old_locus_tag=AC00_2112 NZ_JJLU01000069.1 Protein Homology CDS 16434 18566 . + 0 ID=cds-WP_032276832.1;Parent=gene-AC00_RS31735;Dbxref=GenBank:WP_032276832.1;Name=WP_032276832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108560.1;locus_tag=AC00_RS31735;product=phage tail protein;protein_id=WP_032276832.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 18566 19144 . + . ID=gene-AC00_RS14290;Name=AC00_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14290;old_locus_tag=AC00_2113 NZ_JJLU01000069.1 Protein Homology CDS 18566 19144 . + 0 ID=cds-WP_000144010.1;Parent=gene-AC00_RS14290;Dbxref=GenBank:WP_000144010.1;Name=WP_000144010.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000144011.1;locus_tag=AC00_RS14290;product=tail fiber assembly protein;protein_id=WP_000144010.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 19188 19760 . - . ID=gene-AC00_RS14285;Name=AC00_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14285;old_locus_tag=AC00_2114 NZ_JJLU01000069.1 Protein Homology CDS 19188 19760 . - 0 ID=cds-WP_000954196.1;Parent=gene-AC00_RS14285;Dbxref=GenBank:WP_000954196.1;Name=WP_000954196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310665.2;locus_tag=AC00_RS14285;product=serine O-acetyltransferase;protein_id=WP_000954196.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 19917 20405 . - . ID=gene-AC00_RS14280;Name=AC00_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14280;old_locus_tag=AC00_2115 NZ_JJLU01000069.1 Protein Homology CDS 19917 20405 . - 0 ID=cds-WP_000979948.1;Parent=gene-AC00_RS14280;Dbxref=GenBank:WP_000979948.1;Name=WP_000979948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310666.3;locus_tag=AC00_RS14280;product=phage tail protein;protein_id=WP_000979948.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 20418 23225 . - . ID=gene-AC00_RS14275;Name=AC00_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14275;old_locus_tag=AC00_2116 NZ_JJLU01000069.1 Protein Homology CDS 20418 23225 . - 0 ID=cds-WP_000853454.1;Parent=gene-AC00_RS14275;Dbxref=GenBank:WP_000853454.1;Name=WP_000853454.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000853438.1;locus_tag=AC00_RS14275;product=phage tail tape measure protein;protein_id=WP_000853454.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 23212 23367 . - . ID=gene-AC00_RS30325;Name=AC00_RS30325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30325;old_locus_tag=AC00_2117 NZ_JJLU01000069.1 Protein Homology CDS 23212 23367 . - 0 ID=cds-WP_000333495.1;Parent=gene-AC00_RS30325;Dbxref=GenBank:WP_000333495.1;Name=WP_000333495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000333494.1;locus_tag=AC00_RS30325;product=GpE family phage tail protein;protein_id=WP_000333495.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 23376 23741 . - . ID=gene-AC00_RS14265;Name=AC00_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14265;old_locus_tag=AC00_2118 NZ_JJLU01000069.1 Protein Homology CDS 23376 23741 . - 0 ID=cds-WP_000665308.1;Parent=gene-AC00_RS14265;Dbxref=GenBank:WP_000665308.1;Name=WP_000665308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310670.1;locus_tag=AC00_RS14265;product=tail protein;protein_id=WP_000665308.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 23796 24308 . - . ID=gene-AC00_RS14260;Name=AC00_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14260;old_locus_tag=AC00_2119 NZ_JJLU01000069.1 Protein Homology CDS 23796 24308 . - 0 ID=cds-WP_000290450.1;Parent=gene-AC00_RS14260;Dbxref=GenBank:WP_000290450.1;Name=WP_000290450.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310671.1;locus_tag=AC00_RS14260;product=phage major tail tube protein;protein_id=WP_000290450.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 24308 25492 . - . ID=gene-AC00_RS14255;Name=AC00_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14255;old_locus_tag=AC00_2120 NZ_JJLU01000069.1 Protein Homology CDS 24308 25492 . - 0 ID=cds-WP_000005439.1;Parent=gene-AC00_RS14255;Dbxref=GenBank:WP_000005439.1;Name=WP_000005439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310672.1;locus_tag=AC00_RS14255;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000005439.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 25650 26750 . + . ID=gene-AC00_RS14250;Name=AC00_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14250;old_locus_tag=AC00_2122 NZ_JJLU01000069.1 Protein Homology CDS 25650 26750 . + 0 ID=cds-WP_000132847.1;Parent=gene-AC00_RS14250;Dbxref=GenBank:WP_000132847.1;Name=WP_000132847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001494339.1;locus_tag=AC00_RS14250;product=phage late control D family protein;protein_id=WP_000132847.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 27150 28289 . + . ID=gene-AC00_RS14245;Name=AC00_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14245;old_locus_tag=AC00_2123 NZ_JJLU01000069.1 Protein Homology CDS 27150 28289 . + 0 ID=cds-WP_032281062.1;Parent=gene-AC00_RS14245;Dbxref=GenBank:WP_032281062.1;Name=WP_032281062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014606071.1;locus_tag=AC00_RS14245;product=YecA family protein;protein_id=WP_032281062.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 28579 28839 . + . ID=gene-AC00_RS14240;Name=AC00_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14240;old_locus_tag=AC00_2124 NZ_JJLU01000069.1 Protein Homology CDS 28579 28839 . + 0 ID=cds-WP_000488107.1;Parent=gene-AC00_RS14240;Dbxref=GenBank:WP_000488107.1;Name=WP_000488107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001512982.1;locus_tag=AC00_RS14240;product=ogr/Delta-like zinc finger family protein;protein_id=WP_000488107.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 29030 29170 . + . ID=gene-AC00_RS14235;Name=AC00_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14235;old_locus_tag=AC00_2125 NZ_JJLU01000069.1 Protein Homology CDS 29030 29170 . + 0 ID=cds-WP_000078920.1;Parent=gene-AC00_RS14235;Dbxref=GenBank:WP_000078920.1;Name=WP_000078920.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000078918.1;locus_tag=AC00_RS14235;product=Hok/Gef family protein;protein_id=WP_000078920.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 29359 29640 . - . ID=gene-AC00_RS30335;Name=AC00_RS30335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30335 NZ_JJLU01000069.1 Protein Homology CDS 29359 29640 . - 0 ID=cds-WP_001303543.1;Parent=gene-AC00_RS30335;Dbxref=GenBank:WP_001303543.1;Name=WP_001303543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305382.1;locus_tag=AC00_RS30335;product=hypothetical protein;protein_id=WP_001303543.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 30180 30266 . - . ID=gene-AC00_RS14230;Name=AC00_RS14230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS14230;old_locus_tag=AC00_2126 NZ_JJLU01000069.1 tRNAscan-SE tRNA 30180 30266 . - . ID=rna-AC00_RS14230;Parent=gene-AC00_RS14230;anticodon=(pos:complement(30230..30232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14230;product=tRNA-Leu NZ_JJLU01000069.1 tRNAscan-SE exon 30180 30266 . - . ID=exon-AC00_RS14230-1;Parent=rna-AC00_RS14230;anticodon=(pos:complement(30230..30232));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14230;product=tRNA-Leu NZ_JJLU01000069.1 RefSeq gene 30279 30352 . - . ID=gene-AC00_RS14225;Name=AC00_RS14225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS14225;old_locus_tag=AC00_2127 NZ_JJLU01000069.1 tRNAscan-SE tRNA 30279 30352 . - . ID=rna-AC00_RS14225;Parent=gene-AC00_RS14225;anticodon=(pos:complement(30318..30320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14225;product=tRNA-Cys NZ_JJLU01000069.1 tRNAscan-SE exon 30279 30352 . - . ID=exon-AC00_RS14225-1;Parent=rna-AC00_RS14225;anticodon=(pos:complement(30318..30320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14225;product=tRNA-Cys NZ_JJLU01000069.1 RefSeq gene 30406 30481 . - . ID=gene-AC00_RS14220;Name=AC00_RS14220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS14220;old_locus_tag=AC00_2128 NZ_JJLU01000069.1 tRNAscan-SE tRNA 30406 30481 . - . ID=rna-AC00_RS14220;Parent=gene-AC00_RS14220;anticodon=(pos:complement(30446..30448));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14220;product=tRNA-Gly NZ_JJLU01000069.1 tRNAscan-SE exon 30406 30481 . - . ID=exon-AC00_RS14220-1;Parent=rna-AC00_RS14220;anticodon=(pos:complement(30446..30448));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS14220;product=tRNA-Gly NZ_JJLU01000069.1 RefSeq gene 30633 31181 . - . ID=gene-AC00_RS14215;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AC00_RS14215;old_locus_tag=AC00_2129 NZ_JJLU01000069.1 Protein Homology CDS 30633 31181 . - 0 ID=cds-WP_001160187.1;Parent=gene-AC00_RS14215;Dbxref=GenBank:WP_001160187.1;Name=WP_001160187.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=AC00_RS14215;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001160187.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 31238 33070 . - . ID=gene-AC00_RS14210;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AC00_RS14210;old_locus_tag=AC00_2130 NZ_JJLU01000069.1 Protein Homology CDS 31238 33070 . - 0 ID=cds-WP_001283421.1;Parent=gene-AC00_RS14210;Dbxref=GenBank:WP_001283421.1;Name=WP_001283421.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=AC00_RS14210;product=excinuclease ABC subunit UvrC;protein_id=WP_001283421.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 33067 33723 . - . ID=gene-AC00_RS14205;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=AC00_RS14205;old_locus_tag=AC00_2131 NZ_JJLU01000069.1 Protein Homology CDS 33067 33723 . - 0 ID=cds-WP_000611328.1;Parent=gene-AC00_RS14205;Dbxref=GenBank:WP_000611328.1;Name=WP_000611328.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=AC00_RS14205;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_000611328.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 34019 34195 . + . ID=gene-AC00_RS30340;Name=yecU;gbkey=Gene;gene=yecU;gene_biotype=protein_coding;locus_tag=AC00_RS30340 NZ_JJLU01000069.1 Protein Homology CDS 34019 34195 . + 0 ID=cds-WP_032281063.1;Parent=gene-AC00_RS30340;Dbxref=GenBank:WP_032281063.1;Name=WP_032281063.1;gbkey=CDS;gene=yecU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518796.1;locus_tag=AC00_RS30340;product=protein YecU;protein_id=WP_032281063.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 34182 34406 . + . ID=gene-AC00_RS14200;Name=yecF;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=AC00_RS14200;old_locus_tag=AC00_2132 NZ_JJLU01000069.1 Protein Homology CDS 34182 34406 . + 0 ID=cds-WP_000106474.1;Parent=gene-AC00_RS14200;Dbxref=GenBank:WP_000106474.1;Name=WP_000106474.1;gbkey=CDS;gene=yecF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416425.1;locus_tag=AC00_RS14200;product=DUF2594 family protein YecF;protein_id=WP_000106474.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 34474 35196 . - . ID=gene-AC00_RS14195;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=AC00_RS14195;old_locus_tag=AC00_2133 NZ_JJLU01000069.1 Protein Homology CDS 34474 35196 . - 0 ID=cds-WP_024231281.1;Parent=gene-AC00_RS14195;Dbxref=GenBank:WP_024231281.1;Name=WP_024231281.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310681.1;locus_tag=AC00_RS14195;product=transcriptional regulator SdiA;protein_id=WP_024231281.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 35426 36178 . - . ID=gene-AC00_RS14190;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=AC00_RS14190;old_locus_tag=AC00_2134 NZ_JJLU01000069.1 Protein Homology CDS 35426 36178 . - 0 ID=cds-WP_001685086.1;Parent=gene-AC00_RS14190;Dbxref=GenBank:WP_001685086.1;Name=WP_001685086.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=AC00_RS14190;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_001685086.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 36175 36843 . - . ID=gene-AC00_RS14185;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=AC00_RS14185;old_locus_tag=AC00_2135 NZ_JJLU01000069.1 Protein Homology CDS 36175 36843 . - 0 ID=cds-WP_001158220.1;Parent=gene-AC00_RS14185;Dbxref=GenBank:WP_001158220.1;Name=WP_001158220.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416428.1;locus_tag=AC00_RS14185;product=cystine ABC transporter permease;protein_id=WP_001158220.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 36858 37844 . - . ID=gene-AC00_RS14180;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=AC00_RS14180;old_locus_tag=AC00_2136 NZ_JJLU01000069.1 Protein Homology CDS 36858 37844 . - 0 ID=cds-WP_025652951.1;Parent=gene-AC00_RS14180;Dbxref=GenBank:WP_025652951.1;Name=WP_025652951.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=AC00_RS14180;product=D-cysteine desulfhydrase;protein_id=WP_025652951.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 37949 38749 . - . ID=gene-AC00_RS14175;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=AC00_RS14175;old_locus_tag=AC00_2137 NZ_JJLU01000069.1 Protein Homology CDS 37949 38749 . - 0 ID=cds-WP_032281064.1;Parent=gene-AC00_RS14175;Dbxref=GenBank:WP_032281064.1;Name=WP_032281064.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=AC00_RS14175;product=cystine ABC transporter substrate-binding protein;protein_id=WP_032281064.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 38837 39388 . - . ID=gene-AC00_RS14170;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=AC00_RS14170;old_locus_tag=AC00_2138 NZ_JJLU01000069.1 Protein Homology CDS 38837 39388 . - 0 ID=cds-WP_032224233.1;Parent=gene-AC00_RS14170;Dbxref=GenBank:WP_032224233.1;Name=WP_032224233.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310687.2;locus_tag=AC00_RS14170;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_032224233.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 39434 40153 . - . ID=gene-AC00_RS14165;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=AC00_RS14165;old_locus_tag=AC00_2139 NZ_JJLU01000069.1 Protein Homology CDS 39434 40153 . - 0 ID=cds-WP_001087467.1;Parent=gene-AC00_RS14165;Dbxref=GenBank:WP_001087467.1;Name=WP_001087467.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310688.1;locus_tag=AC00_RS14165;product=RNA polymerase sigma factor FliA;protein_id=WP_001087467.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 40473 42179 . - . ID=gene-AC00_RS14160;Name=AC00_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14160;old_locus_tag=AC00_2142 NZ_JJLU01000069.1 Protein Homology CDS 40473 42179 . - 0 ID=cds-WP_032288214.1;Parent=gene-AC00_RS14160;Dbxref=GenBank:WP_032288214.1;Name=WP_032288214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079685.1;locus_tag=AC00_RS14160;product=FliC/FljB family flagellin;protein_id=WP_032288214.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 42444 43850 . + . ID=gene-AC00_RS14155;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=AC00_RS14155;old_locus_tag=AC00_2143 NZ_JJLU01000069.1 Protein Homology CDS 42444 43850 . + 0 ID=cds-WP_000146784.1;Parent=gene-AC00_RS14155;Dbxref=GenBank:WP_000146784.1;Name=WP_000146784.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=AC00_RS14155;product=flagellar filament capping protein FliD;protein_id=WP_000146784.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 43875 44285 . + . ID=gene-AC00_RS14150;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=AC00_RS14150;old_locus_tag=AC00_2144 NZ_JJLU01000069.1 Protein Homology CDS 43875 44285 . + 0 ID=cds-WP_032281068.1;Parent=gene-AC00_RS14150;Dbxref=GenBank:WP_032281068.1;Name=WP_032281068.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310691.1;locus_tag=AC00_RS14150;product=flagellar export chaperone FliS;protein_id=WP_032281068.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 44285 44650 . + . ID=gene-AC00_RS14145;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=AC00_RS14145;old_locus_tag=AC00_2145 NZ_JJLU01000069.1 Protein Homology CDS 44285 44650 . + 0 ID=cds-WP_001015033.1;Parent=gene-AC00_RS14145;Dbxref=GenBank:WP_001015033.1;Name=WP_001015033.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310692.1;locus_tag=AC00_RS14145;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_001015033.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 44728 46215 . + . ID=gene-AC00_RS14140;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=AC00_RS14140;old_locus_tag=AC00_2146 NZ_JJLU01000069.1 Protein Homology CDS 44728 46215 . + 0 ID=cds-WP_032281070.1;Parent=gene-AC00_RS14140;Dbxref=GenBank:WP_032281070.1;Name=WP_032281070.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416437.1;locus_tag=AC00_RS14140;product=alpha-amylase;protein_id=WP_032281070.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 46249 46662 . - . ID=gene-AC00_RS14135;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=AC00_RS14135;old_locus_tag=AC00_2147 NZ_JJLU01000069.1 Protein Homology CDS 46249 46662 . - 0 ID=cds-WP_001295642.1;Parent=gene-AC00_RS14135;Dbxref=GenBank:WP_001295642.1;Name=WP_001295642.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310694.3;locus_tag=AC00_RS14135;product=lipoprotein YedD;protein_id=WP_001295642.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 46849 48054 . + . ID=gene-AC00_RS14130;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=AC00_RS14130;old_locus_tag=AC00_2148 NZ_JJLU01000069.1 Protein Homology CDS 46849 48054 . + 0 ID=cds-WP_000118897.1;Parent=gene-AC00_RS14130;Dbxref=GenBank:WP_000118897.1;Name=WP_000118897.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416439.1;locus_tag=AC00_RS14130;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_000118897.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 48051 48284 . + . ID=gene-AC00_RS14125;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=AC00_RS14125;old_locus_tag=AC00_2149 NZ_JJLU01000069.1 Protein Homology CDS 48051 48284 . + 0 ID=cds-WP_000790504.1;Parent=gene-AC00_RS14125;Dbxref=GenBank:WP_000790504.1;Name=WP_000790504.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=AC00_RS14125;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_000790504.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 48393 49064 . + . ID=gene-AC00_RS14120;Name=yedK;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=AC00_RS14120;old_locus_tag=AC00_2150 NZ_JJLU01000069.1 Protein Homology CDS 48393 49064 . + 0 ID=cds-WP_032281071.1;Parent=gene-AC00_RS14120;Dbxref=GenBank:WP_032281071.1;Name=WP_032281071.1;gbkey=CDS;gene=yedK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245363.1;locus_tag=AC00_RS14120;product=SOS response-associated peptidase;protein_id=WP_032281071.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 49139 50278 . - . ID=gene-AC00_RS14115;Name=AC00_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS14115;old_locus_tag=AC00_2151 NZ_JJLU01000069.1 Protein Homology CDS 49139 50278 . - 0 ID=cds-WP_032281072.1;Parent=gene-AC00_RS14115;Dbxref=GenBank:WP_032281072.1;Name=WP_032281072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_305405.1;locus_tag=AC00_RS14115;product=leucine-rich repeat domain-containing protein;protein_id=WP_032281072.1;transl_table=11 NZ_JJLU01000069.1 RefSeq pseudogene 50462 50671 . + . ID=gene-AC00_RS31630;Name=AC00_RS31630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31630;old_locus_tag=AC00_2152;partial=true;pseudo=true;start_range=.,50462 NZ_JJLU01000069.1 Protein Homology CDS 50462 50671 . + 0 ID=cds-AC00_RS31630;Parent=gene-AC00_RS31630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242514.1;locus_tag=AC00_RS31630;partial=true;product=hypothetical protein;pseudo=true;start_range=.,50462;transl_table=11 NZ_JJLU01000069.1 RefSeq pseudogene 50629 50958 . + . ID=gene-AC00_RS14110;Name=AC00_RS14110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS14110;old_locus_tag=AC00_2153;partial=true;pseudo=true;start_range=.,50629 NZ_JJLU01000069.1 Protein Homology CDS 50629 50958 . + 0 ID=cds-AC00_RS14110;Parent=gene-AC00_RS14110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416442.1;locus_tag=AC00_RS14110;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,50629;transl_table=11 NZ_JJLU01000069.1 RefSeq pseudogene 51096 52211 . - . ID=gene-AC00_RS14105;Name=AC00_RS14105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS14105;old_locus_tag=AC00_2155;pseudo=true NZ_JJLU01000069.1 Protein Homology CDS 51096 52211 . - 0 ID=cds-AC00_RS14105;Parent=gene-AC00_RS14105;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484288.1;locus_tag=AC00_RS14105;product=DUF5503 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 52564 52878 . - . ID=gene-AC00_RS14100;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=AC00_RS14100;old_locus_tag=AC00_2156 NZ_JJLU01000069.1 Protein Homology CDS 52564 52878 . - 0 ID=cds-WP_032281095.1;Parent=gene-AC00_RS14100;Dbxref=GenBank:WP_032281095.1;Name=WP_032281095.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310703.1;locus_tag=AC00_RS14100;product=flagellar hook-basal body complex protein FliE;protein_id=WP_032281095.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 53093 54751 . + . ID=gene-AC00_RS14095;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=AC00_RS14095;old_locus_tag=AC00_2157 NZ_JJLU01000069.1 Protein Homology CDS 53093 54751 . + 0 ID=cds-WP_021571083.1;Parent=gene-AC00_RS14095;Dbxref=GenBank:WP_021571083.1;Name=WP_021571083.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310704.1;locus_tag=AC00_RS14095;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_021571083.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 54744 55739 . + . ID=gene-AC00_RS14090;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=AC00_RS14090;old_locus_tag=AC00_2158 NZ_JJLU01000069.1 Protein Homology CDS 54744 55739 . + 0 ID=cds-WP_000067950.1;Parent=gene-AC00_RS14090;Dbxref=GenBank:WP_000067950.1;Name=WP_000067950.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=AC00_RS14090;product=flagellar motor switch protein FliG;protein_id=WP_000067950.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 55732 56418 . + . ID=gene-AC00_RS14085;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=AC00_RS14085;old_locus_tag=AC00_2159 NZ_JJLU01000069.1 Protein Homology CDS 55732 56418 . + 0 ID=cds-WP_001282706.1;Parent=gene-AC00_RS14085;Dbxref=GenBank:WP_001282706.1;Name=WP_001282706.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416450.2;locus_tag=AC00_RS14085;product=flagellar assembly protein FliH;protein_id=WP_001282706.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 56418 57791 . + . ID=gene-AC00_RS14080;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=AC00_RS14080;old_locus_tag=AC00_2160 NZ_JJLU01000069.1 Protein Homology CDS 56418 57791 . + 0 ID=cds-WP_032281077.1;Parent=gene-AC00_RS14080;Dbxref=GenBank:WP_032281077.1;Name=WP_032281077.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416451.1;locus_tag=AC00_RS14080;product=flagellar protein export ATPase FliI;protein_id=WP_032281077.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 57810 58253 . + . ID=gene-AC00_RS14075;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=AC00_RS14075;old_locus_tag=AC00_2161 NZ_JJLU01000069.1 Protein Homology CDS 57810 58253 . + 0 ID=cds-WP_000807584.1;Parent=gene-AC00_RS14075;Dbxref=GenBank:WP_000807584.1;Name=WP_000807584.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310708.1;locus_tag=AC00_RS14075;product=flagellar export protein FliJ;protein_id=WP_000807584.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 58250 59377 . + . ID=gene-AC00_RS14070;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=AC00_RS14070;old_locus_tag=AC00_2162 NZ_JJLU01000069.1 Protein Homology CDS 58250 59377 . + 0 ID=cds-WP_032281078.1;Parent=gene-AC00_RS14070;Dbxref=GenBank:WP_032281078.1;Name=WP_032281078.1;gbkey=CDS;gene=fliK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310709.1;locus_tag=AC00_RS14070;product=flagellar hook-length control protein FliK;protein_id=WP_032281078.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 59482 59946 . + . ID=gene-AC00_RS14065;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=AC00_RS14065;old_locus_tag=AC00_2163 NZ_JJLU01000069.1 Protein Homology CDS 59482 59946 . + 0 ID=cds-WP_000133106.1;Parent=gene-AC00_RS14065;Dbxref=GenBank:WP_000133106.1;Name=WP_000133106.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310710.1;locus_tag=AC00_RS14065;product=flagellar basal body-associated protein FliL;protein_id=WP_000133106.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 59951 60955 . + . ID=gene-AC00_RS14060;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=AC00_RS14060;old_locus_tag=AC00_2164 NZ_JJLU01000069.1 Protein Homology CDS 59951 60955 . + 0 ID=cds-WP_001295641.1;Parent=gene-AC00_RS14060;Dbxref=GenBank:WP_001295641.1;Name=WP_001295641.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=AC00_RS14060;product=flagellar motor switch protein FliM;protein_id=WP_001295641.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 60952 61365 . + . ID=gene-AC00_RS14055;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=AC00_RS14055;old_locus_tag=AC00_2165 NZ_JJLU01000069.1 Protein Homology CDS 60952 61365 . + 0 ID=cds-WP_032281079.1;Parent=gene-AC00_RS14055;Dbxref=GenBank:WP_032281079.1;Name=WP_032281079.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310712.1;locus_tag=AC00_RS14055;product=flagellar motor switch protein FliN;protein_id=WP_032281079.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 61368 61733 . + . ID=gene-AC00_RS14050;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=AC00_RS14050;old_locus_tag=AC00_2167 NZ_JJLU01000069.1 Protein Homology CDS 61368 61733 . + 0 ID=cds-WP_001537198.1;Parent=gene-AC00_RS14050;Dbxref=GenBank:WP_001537198.1;Name=WP_001537198.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310713.2;locus_tag=AC00_RS14050;product=flagellar biosynthetic protein FliO;protein_id=WP_001537198.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 61733 62470 . + . ID=gene-AC00_RS14045;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=AC00_RS14045;old_locus_tag=AC00_2168 NZ_JJLU01000069.1 Protein Homology CDS 61733 62470 . + 0 ID=cds-WP_001253441.1;Parent=gene-AC00_RS14045;Dbxref=GenBank:WP_001253441.1;Name=WP_001253441.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310714.1;locus_tag=AC00_RS14045;product=flagellar type III secretion system pore protein FliP;protein_id=WP_001253441.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 62480 62749 . + . ID=gene-AC00_RS14040;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=AC00_RS14040;old_locus_tag=AC00_2169 NZ_JJLU01000069.1 Protein Homology CDS 62480 62749 . + 0 ID=cds-WP_000187358.1;Parent=gene-AC00_RS14040;Dbxref=GenBank:WP_000187358.1;Name=WP_000187358.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=AC00_RS14040;product=flagellar biosynthesis protein FliQ;protein_id=WP_000187358.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 62757 63542 . + . ID=gene-AC00_RS14035;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=AC00_RS14035;old_locus_tag=AC00_2170 NZ_JJLU01000069.1 Protein Homology CDS 62757 63542 . + 0 ID=cds-WP_000942326.1;Parent=gene-AC00_RS14035;Dbxref=GenBank:WP_000942326.1;Name=WP_000942326.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310716.1;locus_tag=AC00_RS14035;product=flagellar biosynthetic protein FliR;protein_id=WP_000942326.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 63832 64455 . + . ID=gene-AC00_RS14030;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=AC00_RS14030;old_locus_tag=AC00_2171 NZ_JJLU01000069.1 Protein Homology CDS 63832 64455 . + 0 ID=cds-WP_000103987.1;Parent=gene-AC00_RS14030;Dbxref=GenBank:WP_000103987.1;Name=WP_000103987.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707836.1;locus_tag=AC00_RS14030;product=transcriptional regulator RcsA;protein_id=WP_000103987.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 64499 64687 . - . ID=gene-AC00_RS14025;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=AC00_RS14025;old_locus_tag=AC00_2172 NZ_JJLU01000069.1 Protein Homology CDS 64499 64687 . - 0 ID=cds-WP_000867217.1;Parent=gene-AC00_RS14025;Dbxref=GenBank:WP_000867217.1;Name=WP_000867217.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=AC00_RS14025;product=protein DsrB;protein_id=WP_000867217.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 64850 65077 . + . ID=gene-AC00_RS14020;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=AC00_RS14020;old_locus_tag=AC00_2173 NZ_JJLU01000069.1 Protein Homology CDS 64850 65077 . + 0 ID=cds-WP_000844800.1;Parent=gene-AC00_RS14020;Dbxref=GenBank:WP_000844800.1;Name=WP_000844800.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=AC00_RS14020;product=peroxide/acid resistance protein YodD;protein_id=WP_000844800.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 65378 66193 . + . ID=gene-AC00_RS14015;Name=yedP;gbkey=Gene;gene=yedP;gene_biotype=protein_coding;locus_tag=AC00_RS14015;old_locus_tag=AC00_2174 NZ_JJLU01000069.1 Protein Homology CDS 65378 66193 . + 0 ID=cds-WP_000491488.1;Parent=gene-AC00_RS14015;Dbxref=GenBank:WP_000491488.1;Name=WP_000491488.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;gene=yedP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310720.1;locus_tag=AC00_RS14015;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_000491488.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 66190 67884 . - . ID=gene-AC00_RS14010;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=AC00_RS14010;old_locus_tag=AC00_2175 NZ_JJLU01000069.1 Protein Homology CDS 66190 67884 . - 0 ID=cds-WP_077696296.1;Parent=gene-AC00_RS14010;Dbxref=GenBank:WP_077696296.1;Name=WP_077696296.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416465.2;locus_tag=AC00_RS14010;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_077696296.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 68055 68237 . - . ID=gene-AC00_RS14005;Name=yodC;gbkey=Gene;gene=yodC;gene_biotype=protein_coding;locus_tag=AC00_RS14005;old_locus_tag=AC00_2176 NZ_JJLU01000069.1 Protein Homology CDS 68055 68237 . - 0 ID=cds-WP_000009307.1;Parent=gene-AC00_RS14005;Dbxref=GenBank:WP_000009307.1;Name=WP_000009307.1;gbkey=CDS;gene=yodC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310722.1;locus_tag=AC00_RS14005;product=YodC family protein;protein_id=WP_000009307.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 68316 69233 . - . ID=gene-AC00_RS14000;Name=yedI;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=AC00_RS14000;old_locus_tag=AC00_2177 NZ_JJLU01000069.1 Protein Homology CDS 68316 69233 . - 0 ID=cds-WP_000922683.1;Parent=gene-AC00_RS14000;Dbxref=GenBank:WP_000922683.1;Name=WP_000922683.1;gbkey=CDS;gene=yedI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310723.1;locus_tag=AC00_RS14000;product=DUF808 domain-containing protein;protein_id=WP_000922683.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 69406 70326 . + . ID=gene-AC00_RS13995;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=AC00_RS13995;old_locus_tag=AC00_2178 NZ_JJLU01000069.1 Protein Homology CDS 69406 70326 . + 0 ID=cds-WP_001212226.1;Parent=gene-AC00_RS13995;Dbxref=GenBank:WP_001212226.1;Name=WP_001212226.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310724.1;locus_tag=AC00_RS13995;product=drug/metabolite exporter YedA;protein_id=WP_001212226.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 70315 70785 . - . ID=gene-AC00_RS13990;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=AC00_RS13990;old_locus_tag=AC00_2179 NZ_JJLU01000069.1 Protein Homology CDS 70315 70785 . - 0 ID=cds-WP_000786004.1;Parent=gene-AC00_RS13990;Dbxref=GenBank:WP_000786004.1;Name=WP_000786004.1;gbkey=CDS;gene=vsr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416469.1;locus_tag=AC00_RS13990;product=VSPR family DNA mismatch endonuclease;protein_id=WP_000786004.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 70766 72184 . - . ID=gene-AC00_RS13985;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=AC00_RS13985;old_locus_tag=AC00_2180 NZ_JJLU01000069.1 Protein Homology CDS 70766 72184 . - 0 ID=cds-WP_032281081.1;Parent=gene-AC00_RS13985;Dbxref=GenBank:WP_032281081.1;Name=WP_032281081.1;gbkey=CDS;gene=dcm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310726.1;locus_tag=AC00_RS13985;product=DNA-cytosine methyltransferase;protein_id=WP_032281081.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 72251 72946 . - . ID=gene-AC00_RS13980;Name=yedJ;gbkey=Gene;gene=yedJ;gene_biotype=protein_coding;locus_tag=AC00_RS13980;old_locus_tag=AC00_2181 NZ_JJLU01000069.1 Protein Homology CDS 72251 72946 . - 0 ID=cds-WP_032281083.1;Parent=gene-AC00_RS13980;Dbxref=GenBank:WP_032281083.1;Name=WP_032281083.1;gbkey=CDS;gene=yedJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310727.1;locus_tag=AC00_RS13980;product=phosphohydrolase;protein_id=WP_032281083.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 72986 73267 . - . ID=gene-AC00_RS13975;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=AC00_RS13975;old_locus_tag=AC00_2182 NZ_JJLU01000069.1 Protein Homology CDS 72986 73267 . - 0 ID=cds-WP_247806594.1;Parent=gene-AC00_RS13975;Dbxref=GenBank:WP_247806594.1;Name=WP_247806594.1;Ontology_term=GO:0051301;gbkey=CDS;gene=drpB;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295638.1;locus_tag=AC00_RS13975;product=cell division protein DrpB;protein_id=WP_247806594.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 73918 74991 . + . ID=gene-AC00_RS13970;Name=AC00_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13970;old_locus_tag=AC00_2183 NZ_JJLU01000069.1 Protein Homology CDS 73918 74991 . + 0 ID=cds-WP_032281084.1;Parent=gene-AC00_RS13970;Dbxref=GenBank:WP_032281084.1;Name=WP_032281084.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000824359.1;locus_tag=AC00_RS13970;product=porin;protein_id=WP_032281084.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 75583 76434 . + . ID=gene-AC00_RS13965;Name=hchA;gbkey=Gene;gene=hchA;gene_biotype=protein_coding;locus_tag=AC00_RS13965;old_locus_tag=AC00_2185 NZ_JJLU01000069.1 Protein Homology CDS 75583 76434 . + 0 ID=cds-WP_032281085.1;Parent=gene-AC00_RS13965;Dbxref=GenBank:WP_032281085.1;Name=WP_032281085.1;Ontology_term=GO:0036524;gbkey=CDS;gene=hchA;go_function=protein deglycase activity|0036524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416476.1;locus_tag=AC00_RS13965;product=glyoxalase III HchA;protein_id=WP_032281085.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 76541 77899 . - . ID=gene-AC00_RS13960;Name=hprS;gbkey=Gene;gene=hprS;gene_biotype=protein_coding;locus_tag=AC00_RS13960;old_locus_tag=AC00_2186 NZ_JJLU01000069.1 Protein Homology CDS 76541 77899 . - 0 ID=cds-WP_032281086.1;Parent=gene-AC00_RS13960;Dbxref=GenBank:WP_032281086.1;Name=WP_032281086.1;gbkey=CDS;gene=hprS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416477.1;locus_tag=AC00_RS13960;product=two-component system sensor histidine kinase HprS;protein_id=WP_032281086.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 77899 78570 . - . ID=gene-AC00_RS13955;Name=hprR;gbkey=Gene;gene=hprR;gene_biotype=protein_coding;locus_tag=AC00_RS13955;old_locus_tag=AC00_2187 NZ_JJLU01000069.1 Protein Homology CDS 77899 78570 . - 0 ID=cds-WP_001339045.1;Parent=gene-AC00_RS13955;Dbxref=GenBank:WP_001339045.1;Name=WP_001339045.1;gbkey=CDS;gene=hprR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707854.2;locus_tag=AC00_RS13955;product=response regulator transcription factor HprR;protein_id=WP_001339045.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 78703 79116 . + . ID=gene-AC00_RS13950;Name=hiuH;gbkey=Gene;gene=hiuH;gene_biotype=protein_coding;locus_tag=AC00_RS13950;old_locus_tag=AC00_2188 NZ_JJLU01000069.1 Protein Homology CDS 78703 79116 . + 0 ID=cds-WP_000920120.1;Parent=gene-AC00_RS13950;Dbxref=GenBank:WP_000920120.1;Name=WP_000920120.1;gbkey=CDS;gene=hiuH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416479.1;locus_tag=AC00_RS13950;product=hydroxyisourate hydrolase;protein_id=WP_000920120.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 79225 80229 . + . ID=gene-AC00_RS13945;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=AC00_RS13945;old_locus_tag=AC00_2189 NZ_JJLU01000069.1 Protein Homology CDS 79225 80229 . + 0 ID=cds-WP_032281087.1;Parent=gene-AC00_RS13945;Dbxref=GenBank:WP_032281087.1;Name=WP_032281087.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310736.1;locus_tag=AC00_RS13945;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_032281087.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 80230 80865 . + . ID=gene-AC00_RS13940;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=AC00_RS13940;old_locus_tag=AC00_2190 NZ_JJLU01000069.1 Protein Homology CDS 80230 80865 . + 0 ID=cds-WP_001240091.1;Parent=gene-AC00_RS13940;Dbxref=GenBank:WP_001240091.1;Name=WP_001240091.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416481.1;locus_tag=AC00_RS13940;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_001240091.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 81122 81772 . + . ID=gene-AC00_RS13935;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=AC00_RS13935;old_locus_tag=AC00_2191 NZ_JJLU01000069.1 Protein Homology CDS 81122 81772 . + 0 ID=cds-WP_032281088.1;Parent=gene-AC00_RS13935;Dbxref=GenBank:WP_032281088.1;Name=WP_032281088.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416482.1;locus_tag=AC00_RS13935;product=metal-binding protein ZinT;protein_id=WP_032281088.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 82115 82645 . + . ID=gene-AC00_RS13930;Name=yodB;gbkey=Gene;gene=yodB;gene_biotype=protein_coding;locus_tag=AC00_RS13930;old_locus_tag=AC00_2192 NZ_JJLU01000069.1 Protein Homology CDS 82115 82645 . + 0 ID=cds-WP_001079074.1;Parent=gene-AC00_RS13930;Dbxref=GenBank:WP_001079074.1;Name=WP_001079074.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;gene=yodB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416483.4;locus_tag=AC00_RS13930;product=cytochrome b;protein_id=WP_001079074.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 83215 83304 . - . ID=gene-AC00_RS13925;Name=AC00_RS13925;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS13925;old_locus_tag=AC00_2193 NZ_JJLU01000069.1 tRNAscan-SE tRNA 83215 83304 . - . ID=rna-AC00_RS13925;Parent=gene-AC00_RS13925;anticodon=(pos:complement(83268..83270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13925;product=tRNA-Ser NZ_JJLU01000069.1 tRNAscan-SE exon 83215 83304 . - . ID=exon-AC00_RS13925-1;Parent=rna-AC00_RS13925;anticodon=(pos:complement(83268..83270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13925;product=tRNA-Ser NZ_JJLU01000069.1 RefSeq gene 83398 84195 . + . ID=gene-AC00_RS13920;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=AC00_RS13920;old_locus_tag=AC00_2194 NZ_JJLU01000069.1 Protein Homology CDS 83398 84195 . + 0 ID=cds-WP_032281098.1;Parent=gene-AC00_RS13920;Dbxref=GenBank:WP_032281098.1;Name=WP_032281098.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=AC00_RS13920;product=DgsA anti-repressor MtfA;protein_id=WP_032281098.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 84296 84371 . + . ID=gene-AC00_RS13915;Name=AC00_RS13915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS13915;old_locus_tag=AC00_2195 NZ_JJLU01000069.1 tRNAscan-SE tRNA 84296 84371 . + . ID=rna-AC00_RS13915;Parent=gene-AC00_RS13915;anticodon=(pos:84329..84331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13915;product=tRNA-Asn NZ_JJLU01000069.1 tRNAscan-SE exon 84296 84371 . + . ID=exon-AC00_RS13915-1;Parent=rna-AC00_RS13915;anticodon=(pos:84329..84331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13915;product=tRNA-Asn NZ_JJLU01000069.1 RefSeq gene 84684 92687 . + . ID=gene-AC00_RS13910;Name=AC00_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13910;old_locus_tag=AC00_2196 NZ_JJLU01000069.1 Protein Homology CDS 84684 92687 . + 0 ID=cds-WP_050438643.1;Parent=gene-AC00_RS13910;Dbxref=GenBank:WP_050438643.1;Name=WP_050438643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904796.1;locus_tag=AC00_RS13910;product=inverse autotransporter adhesin-like protein YeeJ;protein_id=WP_050438643.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 92949 94001 . - . ID=gene-AC00_RS13905;Name=AC00_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13905;old_locus_tag=AC00_2197 NZ_JJLU01000069.1 Protein Homology CDS 92949 94001 . - 0 ID=cds-WP_032281093.1;Parent=gene-AC00_RS13905;Dbxref=GenBank:WP_032281093.1;Name=WP_032281093.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310804.1;locus_tag=AC00_RS13905;product=glycosyltransferase family 9 protein;protein_id=WP_032281093.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 94316 95632 . + . ID=gene-AC00_RS13900;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=AC00_RS13900;old_locus_tag=AC00_2198 NZ_JJLU01000069.1 Protein Homology CDS 94316 95632 . + 0 ID=cds-WP_021570837.1;Parent=gene-AC00_RS13900;Dbxref=GenBank:WP_021570837.1;Name=WP_021570837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310805.1;locus_tag=AC00_RS13900;product=shikimate transporter;protein_id=WP_021570837.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 95734 97188 . + . ID=gene-AC00_RS13895;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=AC00_RS13895;old_locus_tag=AC00_2199 NZ_JJLU01000069.1 Protein Homology CDS 95734 97188 . + 0 ID=cds-WP_001060244.1;Parent=gene-AC00_RS13895;Dbxref=GenBank:WP_001060244.1;Name=WP_001060244.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;gene=amn;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=AC00_RS13895;product=AMP nucleosidase;protein_id=WP_001060244.1;transl_table=11 NZ_JJLU01000069.1 RefSeq gene 97531 98247 . + . ID=gene-AC00_RS13890;Name=yeeN;gbkey=Gene;gene=yeeN;gene_biotype=protein_coding;locus_tag=AC00_RS13890;old_locus_tag=AC00_2200 NZ_JJLU01000069.1 Protein Homology CDS 97531 98247 . + 0 ID=cds-WP_000532912.1;Parent=gene-AC00_RS13890;Dbxref=GenBank:WP_000532912.1;Name=WP_000532912.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=yeeN;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310807.1;locus_tag=AC00_RS13890;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_000532912.1;transl_table=11 NZ_JJLU01000069.1 RefSeq pseudogene 98368 98662 . - . ID=gene-AC00_RS13885;Name=AC00_RS13885;end_range=98662,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13885;old_locus_tag=AC00_2201;partial=true;pseudo=true NZ_JJLU01000069.1 Protein Homology CDS 98368 98662 . - 1 ID=cds-AC00_RS13885;Parent=gene-AC00_RS13885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=98662,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS13885;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000070.1 1 8929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000070.1 RefSeq region 1 8929 . + . ID=NZ_JJLU01000070.1:1..8929;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000070.1 RefSeq pseudogene 1 288 . - . ID=gene-AC00_RS0124820;Name=AC00_RS0124820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124820;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000070.1 Protein Homology CDS 1 288 . - 0 ID=cds-AC00_RS0124820;Parent=gene-AC00_RS0124820;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0124820;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 699 774 . - . ID=gene-AC00_RS13880;Name=AC00_RS13880;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS13880;old_locus_tag=AC00_2204 NZ_JJLU01000070.1 tRNAscan-SE tRNA 699 774 . - . ID=rna-AC00_RS13880;Parent=gene-AC00_RS13880;anticodon=(pos:complement(739..741));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13880;product=tRNA-Asn NZ_JJLU01000070.1 tRNAscan-SE exon 699 774 . - . ID=exon-AC00_RS13880-1;Parent=rna-AC00_RS13880;anticodon=(pos:complement(739..741));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13880;product=tRNA-Asn NZ_JJLU01000070.1 RefSeq gene 875 2362 . - . ID=gene-AC00_RS13875;Name=yeeO;gbkey=Gene;gene=yeeO;gene_biotype=protein_coding;locus_tag=AC00_RS13875;old_locus_tag=AC00_2205 NZ_JJLU01000070.1 Protein Homology CDS 875 2362 . - 0 ID=cds-WP_077757391.1;Parent=gene-AC00_RS13875;Dbxref=GenBank:WP_077757391.1;Name=WP_077757391.1;gbkey=CDS;gene=yeeO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001323172.1;locus_tag=AC00_RS13875;product=toxic metabolite efflux MATE transporter YeeO;protein_id=WP_077757391.1;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 2523 2598 . + . ID=gene-AC00_RS13870;Name=AC00_RS13870;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS13870;old_locus_tag=AC00_2206 NZ_JJLU01000070.1 tRNAscan-SE tRNA 2523 2598 . + . ID=rna-AC00_RS13870;Parent=gene-AC00_RS13870;anticodon=(pos:2556..2558);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13870;product=tRNA-Asn NZ_JJLU01000070.1 tRNAscan-SE exon 2523 2598 . + . ID=exon-AC00_RS13870-1;Parent=rna-AC00_RS13870;anticodon=(pos:2556..2558);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13870;product=tRNA-Asn NZ_JJLU01000070.1 RefSeq gene 2636 3586 . - . ID=gene-AC00_RS13865;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=AC00_RS13865;old_locus_tag=AC00_2207 NZ_JJLU01000070.1 Protein Homology CDS 2636 3586 . - 0 ID=cds-WP_001011008.1;Parent=gene-AC00_RS13865;Dbxref=GenBank:WP_001011008.1;Name=WP_001011008.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416492.1;locus_tag=AC00_RS13865;product=HTH-type transcriptional regulator Cbl;protein_id=WP_001011008.1;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 3688 4605 . - . ID=gene-AC00_RS13860;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=AC00_RS13860;old_locus_tag=AC00_2208 NZ_JJLU01000070.1 Protein Homology CDS 3688 4605 . - 0 ID=cds-WP_001011462.1;Parent=gene-AC00_RS13860;Dbxref=GenBank:WP_001011462.1;Name=WP_001011462.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416493.1;locus_tag=AC00_RS13860;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_001011462.1;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 4932 5007 . + . ID=gene-AC00_RS13855;Name=AC00_RS13855;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS13855;old_locus_tag=AC00_2209 NZ_JJLU01000070.1 tRNAscan-SE tRNA 4932 5007 . + . ID=rna-AC00_RS13855;Parent=gene-AC00_RS13855;anticodon=(pos:4965..4967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13855;product=tRNA-Asn NZ_JJLU01000070.1 tRNAscan-SE exon 4932 5007 . + . ID=exon-AC00_RS13855-1;Parent=rna-AC00_RS13855;anticodon=(pos:4965..4967);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS13855;product=tRNA-Asn NZ_JJLU01000070.1 RefSeq gene 5063 5998 . - . ID=gene-AC00_RS13850;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=AC00_RS13850;old_locus_tag=AC00_2210 NZ_JJLU01000070.1 Protein Homology CDS 5063 5998 . - 0 ID=cds-WP_000986321.1;Parent=gene-AC00_RS13850;Dbxref=GenBank:WP_000986321.1;Name=WP_000986321.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310812.2;locus_tag=AC00_RS13850;product=L%2CD-transpeptidase;protein_id=WP_000986321.1;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 6060 7139 . - . ID=gene-AC00_RS13845;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=AC00_RS13845;old_locus_tag=AC00_2211 NZ_JJLU01000070.1 Protein Homology CDS 6060 7139 . - 0 ID=cds-WP_032288217.1;Parent=gene-AC00_RS13845;Dbxref=GenBank:WP_032288217.1;Name=WP_032288217.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416495.1;locus_tag=AC00_RS13845;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_032288217.1;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 7151 7894 . - . ID=gene-AC00_RS13840;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=AC00_RS13840;old_locus_tag=AC00_2212 NZ_JJLU01000070.1 Protein Homology CDS 7151 7894 . - 0 ID=cds-WP_001326708.1;Parent=gene-AC00_RS13840;Dbxref=GenBank:WP_001326708.1;Name=WP_001326708.1;Ontology_term=GO:0009236,GO:0008818,GO:0051073;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA,adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416496.1;locus_tag=AC00_RS13840;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_001326708.1;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 7891 8436 . - . ID=gene-AC00_RS13835;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=AC00_RS13835;old_locus_tag=AC00_2213 NZ_JJLU01000070.1 Protein Homology CDS 7891 8436 . - 0 ID=cds-WP_000973176.1;Parent=gene-AC00_RS13835;Dbxref=GenBank:WP_000973176.1;Name=WP_000973176.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416497.1;locus_tag=AC00_RS13835;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_000973176.1;transl_table=11 NZ_JJLU01000070.1 RefSeq pseudogene 8588 8686 . - . ID=gene-AC00_RS31240;Name=AC00_RS31240;end_range=8686,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31240;partial=true;pseudo=true NZ_JJLU01000070.1 Protein Homology CDS 8588 8686 . - 0 ID=cds-AC00_RS31240;Parent=gene-AC00_RS31240;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8686,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001524956.1;locus_tag=AC00_RS31240;partial=true;product=cobalamin biosynthesis protein;pseudo=true;transl_table=11 NZ_JJLU01000070.1 RefSeq gene 8741 8929 . + . ID=gene-AC00_RS27740;Name=AC00_RS27740;end_range=8929,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27740;old_locus_tag=AC00_2214;partial=true NZ_JJLU01000070.1 Protein Homology CDS 8741 8929 . + 0 ID=cds-WP_000179196.1;Parent=gene-AC00_RS27740;Dbxref=GenBank:WP_000179196.1;Name=WP_000179196.1;Ontology_term=GO:0006313;end_range=8929,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27740;partial=true;product=IS1 family transposase;protein_id=WP_000179196.1;transl_table=11 ##sequence-region NZ_JJLU01000071.1 1 1357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000071.1 RefSeq region 1 1357 . + . ID=NZ_JJLU01000071.1:1..1357;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000071.1 RefSeq gene 1 281 . + . ID=gene-AC00_RS13830;Name=AC00_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13830;old_locus_tag=AC00_2215;partial=true;start_range=.,1 NZ_JJLU01000071.1 Protein Homology CDS 1 281 . + 2 ID=cds-WP_000431025.1;Parent=gene-AC00_RS13830;Dbxref=GenBank:WP_000431025.1;Name=WP_000431025.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS13830;partial=true;product=IS1 family transposase;protein_id=WP_000431025.1;start_range=.,1;transl_table=11 NZ_JJLU01000071.1 RefSeq pseudogene 360 548 . - . ID=gene-AC00_RS31245;Name=AC00_RS31245;end_range=548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31245;partial=true;pseudo=true;start_range=.,360 NZ_JJLU01000071.1 Protein Homology CDS 360 548 . - 0 ID=cds-AC00_RS31245;Parent=gene-AC00_RS31245;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=548,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904641.1;locus_tag=AC00_RS31245;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,360;transl_table=11 NZ_JJLU01000071.1 RefSeq pseudogene 1228 1357 . - . ID=gene-AC00_RS29590;Name=AC00_RS29590;end_range=1357,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29590;old_locus_tag=AC00_2217;partial=true;pseudo=true NZ_JJLU01000071.1 Protein Homology CDS 1228 1357 . - 1 ID=cds-AC00_RS29590;Parent=gene-AC00_RS29590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS29590;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000072.1 1 2085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000072.1 RefSeq region 1 2085 . + . ID=NZ_JJLU01000072.1:1..2085;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000072.1 RefSeq pseudogene 1 213 . - . ID=gene-AC00_RS0124825;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AC00_RS0124825;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000072.1 Protein Homology CDS 1 213 . - 0 ID=cds-AC00_RS0124825;Parent=gene-AC00_RS0124825;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858246.1;locus_tag=AC00_RS0124825;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000072.1 RefSeq pseudogene 264 930 . - . ID=gene-AC00_RS0124830;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC00_RS0124830;pseudo=true NZ_JJLU01000072.1 Protein Homology CDS 264 930 . - 0 ID=cds-AC00_RS0124830;Parent=gene-AC00_RS0124830;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311873.1;locus_tag=AC00_RS0124830;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11 NZ_JJLU01000072.1 RefSeq gene 1081 1506 . + . ID=gene-AC00_RS13815;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC00_RS13815;old_locus_tag=AC00_2222 NZ_JJLU01000072.1 Protein Homology CDS 1081 1506 . + 0 ID=cds-WP_000422741.1;Parent=gene-AC00_RS13815;Dbxref=GenBank:WP_000422741.1;Name=WP_000422741.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC00_RS13815;product=IS66-like element accessory protein TnpA;protein_id=WP_000422741.1;transl_table=11 NZ_JJLU01000072.1 RefSeq gene 1503 1853 . + . ID=gene-AC00_RS13810;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC00_RS13810;old_locus_tag=AC00_2223 NZ_JJLU01000072.1 Protein Homology CDS 1503 1853 . + 0 ID=cds-WP_001404526.1;Parent=gene-AC00_RS13810;Dbxref=GenBank:WP_001404526.1;Name=WP_001404526.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC00_RS13810;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_001404526.1;transl_table=11 NZ_JJLU01000072.1 RefSeq pseudogene 1884 2085 . + . ID=gene-AC00_RS13805;Name=AC00_RS13805;end_range=2085,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13805;old_locus_tag=AC00_2224;partial=true;pseudo=true NZ_JJLU01000072.1 Protein Homology CDS 1884 2085 . + 0 ID=cds-AC00_RS13805;Parent=gene-AC00_RS13805;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2085,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC00_RS13805;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000073.1 1 726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000073.1 RefSeq region 1 726 . + . ID=NZ_JJLU01000073.1:1..726;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000073.1 RefSeq pseudogene 1 399 . + . ID=gene-AC00_RS13800;Name=AC00_RS13800;end_range=399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13800;old_locus_tag=AC00_2225;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000073.1 Protein Homology CDS 1 399 . + 0 ID=cds-AC00_RS13800;Parent=gene-AC00_RS13800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC00_RS13800;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000073.1 RefSeq pseudogene 394 726 . - . ID=gene-AC00_RS27745;Name=AC00_RS27745;end_range=726,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27745;partial=true;pseudo=true;start_range=.,394 NZ_JJLU01000073.1 Protein Homology CDS 394 726 . - 0 ID=cds-AC00_RS27745;Parent=gene-AC00_RS27745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=726,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS27745;partial=true;product=transposase;pseudo=true;start_range=.,394;transl_table=11 ##sequence-region NZ_JJLU01000074.1 1 11733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000074.1 RefSeq region 1 11733 . + . ID=NZ_JJLU01000074.1:1..11733;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000074.1 RefSeq pseudogene 129 269 . - . ID=gene-AC00_RS30350;Name=AC00_RS30350;end_range=269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30350;partial=true;pseudo=true NZ_JJLU01000074.1 Protein Homology CDS 129 269 . - 0 ID=cds-AC00_RS30350;Parent=gene-AC00_RS30350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=269,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS30350;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000074.1 RefSeq pseudogene 270 1159 . + . ID=gene-AC00_RS27750;Name=AC00_RS27750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27750;old_locus_tag=AC00_2226;partial=true;pseudo=true;start_range=.,270 NZ_JJLU01000074.1 Protein Homology CDS 270 1159 . + 0 ID=cds-AC00_RS27750;Parent=gene-AC00_RS27750;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC00_RS27750;partial=true;product=IS66-like element ISEc47 family transposase;pseudo=true;start_range=.,270;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 1600 1995 . - . ID=gene-AC00_RS13795;Name=AC00_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13795;old_locus_tag=AC00_2227 NZ_JJLU01000074.1 Protein Homology CDS 1600 1995 . - 0 ID=cds-WP_032250546.1;Parent=gene-AC00_RS13795;Dbxref=GenBank:WP_032250546.1;Name=WP_032250546.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000538314.1;locus_tag=AC00_RS13795;product=cell envelope integrity TolA C-terminal domain-containing protein;protein_id=WP_032250546.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 2154 4874 . - . ID=gene-AC00_RS13790;Name=AC00_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13790;old_locus_tag=AC00_2228 NZ_JJLU01000074.1 Protein Homology CDS 2154 4874 . - 0 ID=cds-WP_032288220.1;Parent=gene-AC00_RS13790;Dbxref=GenBank:WP_032288220.1;Name=WP_032288220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000991381.1;locus_tag=AC00_RS13790;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_032288220.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 4886 5218 . - . ID=gene-AC00_RS0124840;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AC00_RS0124840 NZ_JJLU01000074.1 Protein Homology CDS 4886 5218 . - 0 ID=cds-WP_001291058.1;Parent=gene-AC00_RS0124840;Dbxref=GenBank:WP_001291058.1;Name=WP_001291058.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mobA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291058.1;locus_tag=AC00_RS0124840;product=plasmid mobilization protein MobA;protein_id=WP_001291058.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 5451 5786 . + . ID=gene-AC00_RS13785;Name=AC00_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13785;old_locus_tag=AC00_2230 NZ_JJLU01000074.1 Protein Homology CDS 5451 5786 . + 0 ID=cds-WP_032281111.1;Parent=gene-AC00_RS13785;Dbxref=GenBank:WP_032281111.1;Name=WP_032281111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000157082.1;locus_tag=AC00_RS13785;product=hypothetical protein;protein_id=WP_032281111.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 5871 6719 . - . ID=gene-AC00_RS13780;Name=AC00_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13780;old_locus_tag=AC00_2231 NZ_JJLU01000074.1 Protein Homology CDS 5871 6719 . - 0 ID=cds-WP_032281112.1;Parent=gene-AC00_RS13780;Dbxref=GenBank:WP_032281112.1;Name=WP_032281112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401764.1;locus_tag=AC00_RS13780;product=DUF4942 domain-containing protein;protein_id=WP_032281112.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 7300 7551 . + . ID=gene-AC00_RS13775;Name=AC00_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13775;old_locus_tag=AC00_2233 NZ_JJLU01000074.1 Protein Homology CDS 7300 7551 . + 0 ID=cds-WP_000148285.1;Parent=gene-AC00_RS13775;Dbxref=GenBank:WP_000148285.1;Name=WP_000148285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003980153.1;locus_tag=AC00_RS13775;product=helix-turn-helix transcriptional regulator;protein_id=WP_000148285.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 7582 7803 . - . ID=gene-AC00_RS29605;Name=AC00_RS29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29605;old_locus_tag=AC00_2234 NZ_JJLU01000074.1 Protein Homology CDS 7582 7803 . - 0 ID=cds-WP_014358130.1;Parent=gene-AC00_RS29605;Dbxref=GenBank:WP_014358130.1;Name=WP_014358130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014358130.1;locus_tag=AC00_RS29605;product=hypothetical protein;protein_id=WP_014358130.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 7803 8693 . - . ID=gene-AC00_RS13770;Name=AC00_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13770;old_locus_tag=AC00_2235 NZ_JJLU01000074.1 Protein Homology CDS 7803 8693 . - 0 ID=cds-WP_000038343.1;Parent=gene-AC00_RS13770;Dbxref=GenBank:WP_000038343.1;Name=WP_000038343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038335.1;locus_tag=AC00_RS13770;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_000038343.1;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 8690 9079 . - . ID=gene-AC00_RS13765;Name=AC00_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13765;old_locus_tag=AC00_2236 NZ_JJLU01000074.1 Protein Homology CDS 8690 9079 . - 0 ID=cds-WP_000833767.1;Parent=gene-AC00_RS13765;Dbxref=GenBank:WP_000833767.1;Name=WP_000833767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833766.1;locus_tag=AC00_RS13765;product=hypothetical protein;protein_id=WP_000833767.1;transl_table=11 NZ_JJLU01000074.1 RefSeq pseudogene 9032 9469 . + . ID=gene-AC00_RS31635;Name=AC00_RS31635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31635;partial=true;pseudo=true;start_range=.,9032 NZ_JJLU01000074.1 Protein Homology CDS 9032 9469 . + 0 ID=cds-AC00_RS31635;Parent=gene-AC00_RS31635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748652.1;locus_tag=AC00_RS31635;partial=true;product=HNH endonuclease;pseudo=true;start_range=.,9032;transl_table=11 NZ_JJLU01000074.1 RefSeq pseudogene 9476 9595 . - . ID=gene-AC00_RS30905;Name=AC00_RS30905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30905;old_locus_tag=AC00_2237;partial=true;pseudo=true;start_range=.,9476 NZ_JJLU01000074.1 Protein Homology CDS 9476 9595 . - 0 ID=cds-AC00_RS30905;Parent=gene-AC00_RS30905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858331.2;locus_tag=AC00_RS30905;partial=true;product=DNA methyltransferase;pseudo=true;start_range=.,9476;transl_table=11 NZ_JJLU01000074.1 RefSeq pseudogene 9672 9746 . - . ID=gene-AC00_RS31255;Name=AC00_RS31255;end_range=9746,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31255;partial=true;pseudo=true NZ_JJLU01000074.1 Protein Homology CDS 9672 9746 . - 0 ID=cds-AC00_RS31255;Parent=gene-AC00_RS31255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052644.1;locus_tag=AC00_RS31255;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000074.1 RefSeq pseudogene 10293 10844 . - . ID=gene-AC00_RS0124850;Name=AC00_RS0124850;end_range=10844,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124850;partial=true;pseudo=true NZ_JJLU01000074.1 Protein Homology CDS 10293 10844 . - 0 ID=cds-AC00_RS0124850;Parent=gene-AC00_RS0124850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=10844,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219394.1;locus_tag=AC00_RS0124850;partial=true;product=IS110-like element ISShdy1 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000074.1 RefSeq gene 10945 11700 . - . ID=gene-AC00_RS13760;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AC00_RS13760;old_locus_tag=AC00_2239 NZ_JJLU01000074.1 Protein Homology CDS 10945 11700 . - 0 ID=cds-WP_001282653.1;Parent=gene-AC00_RS13760;Dbxref=GenBank:WP_001282653.1;Name=WP_001282653.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282653.1;locus_tag=AC00_RS13760;product=IS21-like element ISSso4 family helper ATPase IstB;protein_id=WP_001282653.1;transl_table=11 ##sequence-region NZ_JJLU01000075.1 1 4248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000075.1 RefSeq region 1 4248 . + . ID=NZ_JJLU01000075.1:1..4248;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000075.1 RefSeq gene 1 208 . - . ID=gene-AC00_RS27775;Name=AC00_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27775;old_locus_tag=AC00_2240;partial=true;start_range=.,1 NZ_JJLU01000075.1 Protein Homology CDS 1 208 . - 0 ID=cds-WP_032236708.1;Parent=gene-AC00_RS27775;Dbxref=GenBank:WP_032236708.1;Name=WP_032236708.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904653.1;locus_tag=AC00_RS27775;partial=true;product=transposase;protein_id=WP_032236708.1;start_range=.,1;transl_table=11 NZ_JJLU01000075.1 RefSeq pseudogene 299 1183 . - . ID=gene-AC00_RS13755;Name=AC00_RS13755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13755;old_locus_tag=AC00_2241;partial=true;pseudo=true;start_range=.,299 NZ_JJLU01000075.1 Protein Homology CDS 299 1183 . - 0 ID=cds-AC00_RS13755;Parent=gene-AC00_RS13755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001368704.1;locus_tag=AC00_RS13755;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,299;transl_table=11 NZ_JJLU01000075.1 RefSeq pseudogene 1269 1658 . + . ID=gene-AC00_RS0124855;Name=AC00_RS0124855;end_range=1658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124855;old_locus_tag=AC00_2242;partial=true;pseudo=true;start_range=.,1269 NZ_JJLU01000075.1 Protein Homology CDS 1269 1658 . + 0 ID=cds-AC00_RS0124855;Parent=gene-AC00_RS0124855;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC00_RS0124855;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1269;transl_table=11 NZ_JJLU01000075.1 RefSeq gene 1815 3563 . + . ID=gene-AC00_RS13750;Name=AC00_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13750;old_locus_tag=AC00_2243 NZ_JJLU01000075.1 Protein Homology CDS 1815 3563 . + 0 ID=cds-WP_032250620.1;Parent=gene-AC00_RS13750;Dbxref=GenBank:WP_032250620.1;Name=WP_032250620.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562494.1;locus_tag=AC00_RS13750;product=3'-5' exonuclease;protein_id=WP_032250620.1;transl_table=11 NZ_JJLU01000075.1 RefSeq pseudogene 4041 4248 . + . ID=gene-AC00_RS0124860;Name=AC00_RS0124860;end_range=4248,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124860;partial=true;pseudo=true NZ_JJLU01000075.1 Protein Homology CDS 4041 4248 . + 0 ID=cds-AC00_RS0124860;Parent=gene-AC00_RS0124860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4248,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS0124860;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000076.1 1 23089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000076.1 RefSeq region 1 23089 . + . ID=NZ_JJLU01000076.1:1..23089;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000076.1 RefSeq pseudogene 1 574 . - . ID=gene-AC00_RS30365;Name=AC00_RS30365;end_range=574,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30365;old_locus_tag=AC00_2244;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000076.1 Protein Homology CDS 1 574 . - 0 ID=cds-AC00_RS30365;Parent=gene-AC00_RS30365;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC00_RS30365;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000076.1 cmsearch sequence_feature 393 509 . - . ID=id-AC00_RS30365;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS30365;pseudo=true NZ_JJLU01000076.1 RefSeq gene 960 2153 . - . ID=gene-AC00_RS13740;Name=AC00_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13740;old_locus_tag=AC00_2245 NZ_JJLU01000076.1 Protein Homology CDS 960 2153 . - 0 ID=cds-WP_000074481.1;Parent=gene-AC00_RS13740;Dbxref=GenBank:WP_000074481.1;Name=WP_000074481.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709453.1;locus_tag=AC00_RS13740;product=MFS transporter;protein_id=WP_000074481.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 2289 4013 . + . ID=gene-AC00_RS13735;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=AC00_RS13735;old_locus_tag=AC00_2246 NZ_JJLU01000076.1 Protein Homology CDS 2289 4013 . + 0 ID=cds-WP_001299620.1;Parent=gene-AC00_RS13735;Dbxref=GenBank:WP_001299620.1;Name=WP_001299620.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001314127.1;locus_tag=AC00_RS13735;product=aerobactin synthase IucA;protein_id=WP_001299620.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 4014 4961 . + . ID=gene-AC00_RS13730;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=AC00_RS13730;old_locus_tag=AC00_2247 NZ_JJLU01000076.1 Protein Homology CDS 4014 4961 . + 0 ID=cds-WP_001287497.1;Parent=gene-AC00_RS13730;Dbxref=GenBank:WP_001287497.1;Name=WP_001287497.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=AC00_RS13730;product=N(6)-hydroxylysine O-acetyltransferase IucB;protein_id=WP_001287497.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 4961 6703 . + . ID=gene-AC00_RS13725;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=AC00_RS13725;old_locus_tag=AC00_2248 NZ_JJLU01000076.1 Protein Homology CDS 4961 6703 . + 0 ID=cds-WP_001015708.1;Parent=gene-AC00_RS13725;Dbxref=GenBank:WP_001015708.1;Name=WP_001015708.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709456.1;locus_tag=AC00_RS13725;product=NIS family aerobactin synthetase IucC;protein_id=WP_001015708.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 6700 8037 . + . ID=gene-AC00_RS13720;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=protein_coding;locus_tag=AC00_RS13720;old_locus_tag=AC00_2249 NZ_JJLU01000076.1 Protein Homology CDS 6700 8037 . + 0 ID=cds-WP_032281120.1;Parent=gene-AC00_RS13720;Dbxref=GenBank:WP_032281120.1;Name=WP_032281120.1;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709457.1;locus_tag=AC00_RS13720;product=NADPH-dependent L-lysine N(6)-monooxygenase IucD;protein_id=WP_032281120.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 8043 10238 . + . ID=gene-AC00_RS13715;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=AC00_RS13715;old_locus_tag=AC00_2250 NZ_JJLU01000076.1 Protein Homology CDS 8043 10238 . + 0 ID=cds-WP_001432292.1;Parent=gene-AC00_RS13715;Dbxref=GenBank:WP_001432292.1;Name=WP_001432292.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709458.2;locus_tag=AC00_RS13715;product=ferric aerobactin receptor IutA;protein_id=WP_001432292.1;transl_table=11 NZ_JJLU01000076.1 RefSeq pseudogene 10496 10714 . - . ID=gene-AC00_RS13710;Name=AC00_RS13710;end_range=10714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13710;old_locus_tag=AC00_2251;partial=true;pseudo=true NZ_JJLU01000076.1 Protein Homology CDS 10496 10714 . - 0 ID=cds-AC00_RS13710;Parent=gene-AC00_RS13710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=10714,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC00_RS13710;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 10798 11223 . + . ID=gene-AC00_RS13705;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC00_RS13705;old_locus_tag=AC00_2252 NZ_JJLU01000076.1 Protein Homology CDS 10798 11223 . + 0 ID=cds-WP_000422760.1;Parent=gene-AC00_RS13705;Dbxref=GenBank:WP_000422760.1;Name=WP_000422760.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373091.1;locus_tag=AC00_RS13705;product=IS66-like element accessory protein TnpA;protein_id=WP_000422760.1;transl_table=11 NZ_JJLU01000076.1 RefSeq pseudogene 11220 11294 . + . ID=gene-AC00_RS31260;Name=AC00_RS31260;end_range=11294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31260;partial=true;pseudo=true NZ_JJLU01000076.1 Protein Homology CDS 11220 11294 . + 0 ID=cds-AC00_RS31260;Parent=gene-AC00_RS31260;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC00_RS31260;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 11523 11705 . - . ID=gene-AC00_RS13700;Name=AC00_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13700;old_locus_tag=AC00_2253 NZ_JJLU01000076.1 Protein Homology CDS 11523 11705 . - 0 ID=cds-WP_000282125.1;Parent=gene-AC00_RS13700;Dbxref=GenBank:WP_000282125.1;Name=WP_000282125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309421.1;locus_tag=AC00_RS13700;product=hypothetical protein;protein_id=WP_000282125.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 12033 12905 . + . ID=gene-AC00_RS13695;Name=AC00_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13695;old_locus_tag=AC00_2254 NZ_JJLU01000076.1 Protein Homology CDS 12033 12905 . + 0 ID=cds-WP_001069768.1;Parent=gene-AC00_RS13695;Dbxref=GenBank:WP_001069768.1;Name=WP_001069768.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309422.1;locus_tag=AC00_RS13695;product=GTPase family protein;protein_id=WP_001069768.1;transl_table=11 NZ_JJLU01000076.1 RefSeq pseudogene 13277 16125 . + . ID=gene-AC00_RS0124870;Name=cah;gbkey=Gene;gene=cah;gene_biotype=pseudogene;locus_tag=AC00_RS0124870;old_locus_tag=AC00_2256;pseudo=true NZ_JJLU01000076.1 Protein Homology CDS 13277 16125 . + 0 ID=cds-AC00_RS0124870;Parent=gene-AC00_RS0124870;Note=frameshifted;gbkey=CDS;gene=cah;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309423.1;locus_tag=AC00_RS0124870;product=calcium-binding autotransporter Cah;pseudo=true;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 16236 18620 . + . ID=gene-AC00_RS13690;Name=AC00_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13690;old_locus_tag=AC00_2257 NZ_JJLU01000076.1 Protein Homology CDS 16236 18620 . + 0 ID=cds-WP_032281121.1;Parent=gene-AC00_RS13690;Dbxref=GenBank:WP_032281121.1;Name=WP_032281121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309424.1;locus_tag=AC00_RS13690;product=dynamin family protein;protein_id=WP_032281121.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 18617 19522 . + . ID=gene-AC00_RS13685;Name=AC00_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13685;old_locus_tag=AC00_2258 NZ_JJLU01000076.1 Protein Homology CDS 18617 19522 . + 0 ID=cds-WP_000203541.1;Parent=gene-AC00_RS13685;Dbxref=GenBank:WP_000203541.1;Name=WP_000203541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309425.1;locus_tag=AC00_RS13685;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_000203541.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 19519 20589 . + . ID=gene-AC00_RS13680;Name=AC00_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13680;old_locus_tag=AC00_2259 NZ_JJLU01000076.1 Protein Homology CDS 19519 20589 . + 0 ID=cds-WP_000102669.1;Parent=gene-AC00_RS13680;Dbxref=GenBank:WP_000102669.1;Name=WP_000102669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309426.1;locus_tag=AC00_RS13680;product=patatin-like phospholipase family protein;protein_id=WP_000102669.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 20929 21747 . + . ID=gene-AC00_RS13670;Name=AC00_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13670;old_locus_tag=AC00_2261 NZ_JJLU01000076.1 Protein Homology CDS 20929 21747 . + 0 ID=cds-WP_001234685.1;Parent=gene-AC00_RS13670;Dbxref=GenBank:WP_001234685.1;Name=WP_001234685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309428.1;locus_tag=AC00_RS13670;product=DUF932 domain-containing protein;protein_id=WP_001234685.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 21838 22323 . + . ID=gene-AC00_RS13665;Name=AC00_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13665;old_locus_tag=AC00_2262 NZ_JJLU01000076.1 Protein Homology CDS 21838 22323 . + 0 ID=cds-WP_000214398.1;Parent=gene-AC00_RS13665;Dbxref=GenBank:WP_000214398.1;Name=WP_000214398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AC00_RS13665;product=antirestriction protein;protein_id=WP_000214398.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 22339 22815 . + . ID=gene-AC00_RS13660;Name=AC00_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13660;old_locus_tag=AC00_2263 NZ_JJLU01000076.1 Protein Homology CDS 22339 22815 . + 0 ID=cds-WP_032281122.1;Parent=gene-AC00_RS13660;Dbxref=GenBank:WP_032281122.1;Name=WP_032281122.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AC00_RS13660;product=JAB domain-containing protein;protein_id=WP_032281122.1;transl_table=11 NZ_JJLU01000076.1 RefSeq gene 22884 23089 . + . ID=gene-AC00_RS13655;Name=AC00_RS13655;end_range=23089,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13655;old_locus_tag=AC00_2265;partial=true NZ_JJLU01000076.1 Protein Homology CDS 22884 23089 . + 0 ID=cds-WP_004018154.1;Parent=gene-AC00_RS13655;Dbxref=GenBank:WP_004018154.1;Name=WP_004018154.1;end_range=23089,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AC00_RS13655;partial=true;product=DUF987 domain-containing protein;protein_id=WP_004018154.1;transl_table=11 ##sequence-region NZ_JJLU01000077.1 1 35911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000077.1 RefSeq region 1 35911 . + . ID=NZ_JJLU01000077.1:1..35911;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000077.1 RefSeq pseudogene 1 123 . - . ID=gene-AC00_RS30375;Name=AC00_RS30375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30375;old_locus_tag=AC00_2266;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000077.1 Protein Homology CDS 1 123 . - 0 ID=cds-AC00_RS30375;Parent=gene-AC00_RS30375;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS30375;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 296 625 . - . ID=gene-AC00_RS13645;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=AC00_RS13645;old_locus_tag=AC00_2267 NZ_JJLU01000077.1 Protein Homology CDS 296 625 . - 0 ID=cds-WP_000450409.1;Parent=gene-AC00_RS13645;Dbxref=GenBank:WP_000450409.1;Name=WP_000450409.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310836.2;locus_tag=AC00_RS13645;product=DUF496 family protein;protein_id=WP_000450409.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 797 1855 . - . ID=gene-AC00_RS13640;Name=yeeA;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=AC00_RS13640;old_locus_tag=AC00_2269 NZ_JJLU01000077.1 Protein Homology CDS 797 1855 . - 0 ID=cds-WP_001200891.1;Parent=gene-AC00_RS13640;Dbxref=GenBank:WP_001200891.1;Name=WP_001200891.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yeeA;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416512.1;locus_tag=AC00_RS13640;product=FUSC family protein;protein_id=WP_001200891.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 2053 2526 . - . ID=gene-AC00_RS13635;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=AC00_RS13635;old_locus_tag=AC00_2270 NZ_JJLU01000077.1 Protein Homology CDS 2053 2526 . - 0 ID=cds-WP_001105412.1;Parent=gene-AC00_RS13635;Dbxref=GenBank:WP_001105412.1;Name=WP_001105412.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310838.1;locus_tag=AC00_RS13635;product=DNA gyrase inhibitor SbmC;protein_id=WP_001105412.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 2645 3811 . - . ID=gene-AC00_RS13630;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=AC00_RS13630;old_locus_tag=AC00_2271 NZ_JJLU01000077.1 Protein Homology CDS 2645 3811 . - 0 ID=cds-WP_032281125.1;Parent=gene-AC00_RS13630;Dbxref=GenBank:WP_032281125.1;Name=WP_032281125.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416514.4;locus_tag=AC00_RS13630;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_032281125.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 4020 5447 . + . ID=gene-AC00_RS13625;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AC00_RS13625;old_locus_tag=AC00_2272 NZ_JJLU01000077.1 Protein Homology CDS 4020 5447 . + 0 ID=cds-WP_001575872.1;Parent=gene-AC00_RS13625;Dbxref=GenBank:WP_001575872.1;Name=WP_001575872.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416515.1;locus_tag=AC00_RS13625;product=exodeoxyribonuclease I;protein_id=WP_001575872.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 5501 5725 . - . ID=gene-AC00_RS13620;Name=tsuB;gbkey=Gene;gene=tsuB;gene_biotype=protein_coding;locus_tag=AC00_RS13620;old_locus_tag=AC00_2273 NZ_JJLU01000077.1 Protein Homology CDS 5501 5725 . - 0 ID=cds-WP_001575873.1;Parent=gene-AC00_RS13620;Dbxref=GenBank:WP_001575873.1;Name=WP_001575873.1;gbkey=CDS;gene=tsuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575873.1;locus_tag=AC00_RS13620;product=thiosulfate utilization sulfurtransferase TsuB/YeeD;protein_id=WP_001575873.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 5738 6793 . - . ID=gene-AC00_RS13615;Name=tsuA;gbkey=Gene;gene=tsuA;gene_biotype=protein_coding;locus_tag=AC00_RS13615;old_locus_tag=AC00_2274 NZ_JJLU01000077.1 Protein Homology CDS 5738 6793 . - 0 ID=cds-WP_024193902.1;Parent=gene-AC00_RS13615;Dbxref=GenBank:WP_024193902.1;Name=WP_024193902.1;gbkey=CDS;gene=tsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963872.1;locus_tag=AC00_RS13615;product=thiosulfate utilization transporter TsuA/YeeE;protein_id=WP_024193902.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 6984 8342 . - . ID=gene-AC00_RS13610;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=AC00_RS13610;old_locus_tag=AC00_2275 NZ_JJLU01000077.1 Protein Homology CDS 6984 8342 . - 0 ID=cds-WP_032281127.1;Parent=gene-AC00_RS13610;Dbxref=GenBank:WP_032281127.1;Name=WP_032281127.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227833.1;locus_tag=AC00_RS13610;product=putrescine/proton symporter PlaP;protein_id=WP_032281127.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 8690 9511 . - . ID=gene-AC00_RS13605;Name=AC00_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13605;old_locus_tag=AC00_2276 NZ_JJLU01000077.1 Protein Homology CDS 8690 9511 . - 0 ID=cds-WP_032281128.1;Parent=gene-AC00_RS13605;Dbxref=GenBank:WP_032281128.1;Name=WP_032281128.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=AC00_RS13605;product=SDR family oxidoreductase;protein_id=WP_032281128.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 9690 9740 . + . ID=gene-AC00_RS27800;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=AC00_RS27800 NZ_JJLU01000077.1 Protein Homology CDS 9690 9740 . + 0 ID=cds-WP_071594744.1;Parent=gene-AC00_RS27800;Dbxref=GenBank:WP_071594744.1;Name=WP_071594744.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=AC00_RS27800;product=his operon leader peptide;protein_id=WP_071594744.1;transl_table=11 NZ_JJLU01000077.1 cmsearch sequence_feature 9716 9837 . + . ID=id-NZ_JJLU01000077.1:9716..9837;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLU01000077.1 RefSeq gene 9872 10771 . + . ID=gene-AC00_RS13600;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AC00_RS13600;old_locus_tag=AC00_2278 NZ_JJLU01000077.1 Protein Homology CDS 9872 10771 . + 0 ID=cds-WP_001575878.1;Parent=gene-AC00_RS13600;Dbxref=GenBank:WP_001575878.1;Name=WP_001575878.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=AC00_RS13600;product=ATP phosphoribosyltransferase;protein_id=WP_001575878.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 10777 12081 . + . ID=gene-AC00_RS13595;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AC00_RS13595;old_locus_tag=AC00_2279 NZ_JJLU01000077.1 Protein Homology CDS 10777 12081 . + 0 ID=cds-WP_032281129.1;Parent=gene-AC00_RS13595;Dbxref=GenBank:WP_032281129.1;Name=WP_032281129.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461017.1;locus_tag=AC00_RS13595;product=histidinol dehydrogenase;protein_id=WP_032281129.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 12078 13139 . + . ID=gene-AC00_RS13590;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=AC00_RS13590;old_locus_tag=AC00_2280 NZ_JJLU01000077.1 Protein Homology CDS 12078 13139 . + 0 ID=cds-WP_032281130.1;Parent=gene-AC00_RS13590;Dbxref=GenBank:WP_032281130.1;Name=WP_032281130.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959633.1;locus_tag=AC00_RS13590;product=histidinol-phosphate transaminase;protein_id=WP_032281130.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 13136 14203 . + . ID=gene-AC00_RS13585;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=AC00_RS13585;old_locus_tag=AC00_2281 NZ_JJLU01000077.1 Protein Homology CDS 13136 14203 . + 0 ID=cds-WP_001575882.1;Parent=gene-AC00_RS13585;Dbxref=GenBank:WP_001575882.1;Name=WP_001575882.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416526.4;locus_tag=AC00_RS13585;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_001575882.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 14203 14793 . + . ID=gene-AC00_RS13580;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AC00_RS13580;old_locus_tag=AC00_2282 NZ_JJLU01000077.1 Protein Homology CDS 14203 14793 . + 0 ID=cds-WP_001575883.1;Parent=gene-AC00_RS13580;Dbxref=GenBank:WP_001575883.1;Name=WP_001575883.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=AC00_RS13580;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001575883.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 14793 15530 . + . ID=gene-AC00_RS13575;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=AC00_RS13575;old_locus_tag=AC00_2283 NZ_JJLU01000077.1 Protein Homology CDS 14793 15530 . + 0 ID=cds-WP_032281131.1;Parent=gene-AC00_RS13575;Dbxref=GenBank:WP_032281131.1;Name=WP_032281131.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227841.1;locus_tag=AC00_RS13575;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_032281131.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 15512 16288 . + . ID=gene-AC00_RS13570;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=AC00_RS13570;old_locus_tag=AC00_2284 NZ_JJLU01000077.1 Protein Homology CDS 15512 16288 . + 0 ID=cds-WP_032281132.1;Parent=gene-AC00_RS13570;Dbxref=GenBank:WP_032281132.1;Name=WP_032281132.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=AC00_RS13570;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_032281132.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 16282 16881 . + . ID=gene-AC00_RS13565;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=AC00_RS13565;old_locus_tag=AC00_2285 NZ_JJLU01000077.1 Protein Homology CDS 16282 16881 . + 0 ID=cds-WP_032288224.1;Parent=gene-AC00_RS13565;Dbxref=GenBank:WP_032288224.1;Name=WP_032288224.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416530.1;locus_tag=AC00_RS13565;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_032288224.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 16938 18104 . - . ID=gene-AC00_RS13560;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=AC00_RS13560;old_locus_tag=AC00_2286 NZ_JJLU01000077.1 Protein Homology CDS 16938 18104 . - 0 ID=cds-WP_032281134.1;Parent=gene-AC00_RS13560;Dbxref=GenBank:WP_032281134.1;Name=WP_032281134.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=AC00_RS13560;product=UDP-glucose 6-dehydrogenase;protein_id=WP_032281134.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 18308 19714 . - . ID=gene-AC00_RS13555;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=AC00_RS13555;old_locus_tag=AC00_2287 NZ_JJLU01000077.1 Protein Homology CDS 18308 19714 . - 0 ID=cds-WP_032281135.1;Parent=gene-AC00_RS13555;Dbxref=GenBank:WP_032281135.1;Name=WP_032281135.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416533.1;locus_tag=AC00_RS13555;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_032281135.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 19894 20802 . - . ID=gene-AC00_RS0124875;Name=AC00_RS0124875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124875;old_locus_tag=AC00_2288 NZ_JJLU01000077.1 Protein Homology CDS 19894 20802 . - 0 ID=cds-WP_050438644.1;Parent=gene-AC00_RS0124875;Dbxref=GenBank:WP_050438644.1;Name=WP_050438644.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024967.6;locus_tag=AC00_RS0124875;product=class I SAM-dependent methyltransferase;protein_id=WP_050438644.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 20799 22238 . - . ID=gene-AC00_RS13550;Name=AC00_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13550;old_locus_tag=AC00_2289 NZ_JJLU01000077.1 Protein Homology CDS 20799 22238 . - 0 ID=cds-WP_032281136.1;Parent=gene-AC00_RS13550;Dbxref=GenBank:WP_032281136.1;Name=WP_032281136.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046913.2;locus_tag=AC00_RS13550;product=glycosyltransferase family 1 protein;protein_id=WP_032281136.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 22228 23880 . - . ID=gene-AC00_RS13545;Name=AC00_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13545;old_locus_tag=AC00_2290 NZ_JJLU01000077.1 GeneMarkS-2+ CDS 22228 23880 . - 0 ID=cds-WP_032281137.1;Parent=gene-AC00_RS13545;Dbxref=GenBank:WP_032281137.1;Name=WP_032281137.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS13545;product=tetratricopeptide repeat protein;protein_id=WP_032281137.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 23877 24905 . - . ID=gene-AC00_RS13540;Name=AC00_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13540;old_locus_tag=AC00_2291 NZ_JJLU01000077.1 Protein Homology CDS 23877 24905 . - 0 ID=cds-WP_032281138.1;Parent=gene-AC00_RS13540;Dbxref=GenBank:WP_032281138.1;Name=WP_032281138.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016903.6;locus_tag=AC00_RS13540;product=rhamnan synthesis F family protein;protein_id=WP_032281138.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 24907 26202 . - . ID=gene-AC00_RS13535;Name=AC00_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13535;old_locus_tag=AC00_2292 NZ_JJLU01000077.1 GeneMarkS-2+ CDS 24907 26202 . - 0 ID=cds-WP_032281139.1;Parent=gene-AC00_RS13535;Dbxref=GenBank:WP_032281139.1;Name=WP_032281139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS13535;product=hypothetical protein;protein_id=WP_032281139.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 26224 26949 . - . ID=gene-AC00_RS13530;Name=wzt;gbkey=Gene;gene=wzt;gene_biotype=protein_coding;locus_tag=AC00_RS13530;old_locus_tag=AC00_2293 NZ_JJLU01000077.1 Protein Homology CDS 26224 26949 . - 0 ID=cds-WP_032281140.1;Parent=gene-AC00_RS13530;Dbxref=GenBank:WP_032281140.1;Name=WP_032281140.1;gbkey=CDS;gene=wzt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032281140.1;locus_tag=AC00_RS13530;product=O97 family O-antigen export ABC transporter ATP-binding subunit;protein_id=WP_032281140.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 26946 27686 . - . ID=gene-AC00_RS0124880;Name=wzm;gbkey=Gene;gene=wzm;gene_biotype=protein_coding;locus_tag=AC00_RS0124880 NZ_JJLU01000077.1 Protein Homology CDS 26946 27686 . - 0 ID=cds-WP_032281141.1;Parent=gene-AC00_RS0124880;Dbxref=GenBank:WP_032281141.1;Name=WP_032281141.1;gbkey=CDS;gene=wzm;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032281141.1;locus_tag=AC00_RS0124880;product=O97 family O-antigen export ABC transporter permease subunit;protein_id=WP_032281141.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 27829 28149 . - . ID=gene-AC00_RS13525;Name=AC00_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13525;old_locus_tag=AC00_2295 NZ_JJLU01000077.1 Protein Homology CDS 27829 28149 . - 0 ID=cds-WP_032281142.1;Parent=gene-AC00_RS13525;Dbxref=GenBank:WP_032281142.1;Name=WP_032281142.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081614.1;locus_tag=AC00_RS13525;product=cupin domain-containing protein;protein_id=WP_032281142.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 28136 28873 . - . ID=gene-AC00_RS13520;Name=AC00_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13520;old_locus_tag=AC00_2296 NZ_JJLU01000077.1 GeneMarkS-2+ CDS 28136 28873 . - 0 ID=cds-WP_050438645.1;Parent=gene-AC00_RS13520;Dbxref=GenBank:WP_050438645.1;Name=WP_050438645.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS13520;product=glycosyltransferase family 2 protein;protein_id=WP_050438645.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 28899 29516 . - . ID=gene-AC00_RS13515;Name=AC00_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13515;old_locus_tag=AC00_2297 NZ_JJLU01000077.1 Protein Homology CDS 28899 29516 . - 0 ID=cds-WP_032281157.1;Parent=gene-AC00_RS13515;Dbxref=GenBank:WP_032281157.1;Name=WP_032281157.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081616.1;locus_tag=AC00_RS13515;product=HAD family hydrolase;protein_id=WP_032281157.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 29527 30159 . - . ID=gene-AC00_RS13510;Name=AC00_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13510;old_locus_tag=AC00_2298 NZ_JJLU01000077.1 Protein Homology CDS 29527 30159 . - 0 ID=cds-WP_032281144.1;Parent=gene-AC00_RS13510;Dbxref=GenBank:WP_032281144.1;Name=WP_032281144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081617.1;locus_tag=AC00_RS13510;product=phosphodiesterase;protein_id=WP_032281144.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 30156 30917 . - . ID=gene-AC00_RS13505;Name=AC00_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13505;old_locus_tag=AC00_2299 NZ_JJLU01000077.1 Protein Homology CDS 30156 30917 . - 0 ID=cds-WP_032281146.1;Parent=gene-AC00_RS13505;Dbxref=GenBank:WP_032281146.1;Name=WP_032281146.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536023.1;locus_tag=AC00_RS13505;product=glycosyltransferase family 2 protein;protein_id=WP_032281146.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 30986 31912 . - . ID=gene-AC00_RS13500;Name=AC00_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13500;old_locus_tag=AC00_2300 NZ_JJLU01000077.1 Protein Homology CDS 30986 31912 . - 0 ID=cds-WP_032281149.1;Parent=gene-AC00_RS13500;Dbxref=GenBank:WP_032281149.1;Name=WP_032281149.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF012745.6;locus_tag=AC00_RS13500;product=glycosyltransferase family 2 protein;protein_id=WP_032281149.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 31919 32464 . - . ID=gene-AC00_RS13495;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AC00_RS13495;old_locus_tag=AC00_2301 NZ_JJLU01000077.1 Protein Homology CDS 31919 32464 . - 0 ID=cds-WP_032281150.1;Parent=gene-AC00_RS13495;Dbxref=GenBank:WP_032281150.1;Name=WP_032281150.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001100791.1;locus_tag=AC00_RS13495;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_032281150.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 32482 33372 . - . ID=gene-AC00_RS13490;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AC00_RS13490;old_locus_tag=AC00_2302 NZ_JJLU01000077.1 Protein Homology CDS 32482 33372 . - 0 ID=cds-WP_032281151.1;Parent=gene-AC00_RS13490;Dbxref=GenBank:WP_032281151.1;Name=WP_032281151.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161467.1;locus_tag=AC00_RS13490;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_032281151.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 33395 34261 . - . ID=gene-AC00_RS13485;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AC00_RS13485;old_locus_tag=AC00_2303 NZ_JJLU01000077.1 Protein Homology CDS 33395 34261 . - 0 ID=cds-WP_032281152.1;Parent=gene-AC00_RS13485;Dbxref=GenBank:WP_032281152.1;Name=WP_032281152.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227857.1;locus_tag=AC00_RS13485;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_032281152.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 34275 35363 . - . ID=gene-AC00_RS13480;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AC00_RS13480;old_locus_tag=AC00_2304 NZ_JJLU01000077.1 Protein Homology CDS 34275 35363 . - 0 ID=cds-WP_032281153.1;Parent=gene-AC00_RS13480;Dbxref=GenBank:WP_032281153.1;Name=WP_032281153.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575913.1;locus_tag=AC00_RS13480;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_032281153.1;transl_table=11 NZ_JJLU01000077.1 RefSeq gene 35675 35911 . + . ID=gene-AC00_RS0124885;Name=AC00_RS0124885;end_range=35911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124885;old_locus_tag=AC00_2306;partial=true NZ_JJLU01000077.1 Protein Homology CDS 35675 35911 . + 0 ID=cds-WP_000179207.1-3;Parent=gene-AC00_RS0124885;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;end_range=35911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124885;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;transl_table=11 ##sequence-region NZ_JJLU01000078.1 1 3633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000078.1 RefSeq region 1 3633 . + . ID=NZ_JJLU01000078.1:1..3633;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000078.1 RefSeq pseudogene 1 422 . - . ID=gene-AC00_RS13475;Name=AC00_RS13475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13475;old_locus_tag=AC00_2307;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000078.1 Protein Homology CDS 1 422 . - 0 ID=cds-AC00_RS13475;Parent=gene-AC00_RS13475;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS13475;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000078.1 RefSeq gene 561 938 . - . ID=gene-AC00_RS0124890;Name=AC00_RS0124890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124890 NZ_JJLU01000078.1 Protein Homology CDS 561 938 . - 0 ID=cds-WP_032250645.1;Parent=gene-AC00_RS0124890;Dbxref=GenBank:WP_032250645.1;Name=WP_032250645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575759.1;locus_tag=AC00_RS0124890;product=enterotoxin;protein_id=WP_032250645.1;transl_table=11 NZ_JJLU01000078.1 RefSeq gene 986 1843 . - . ID=gene-AC00_RS27805;Name=AC00_RS27805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27805;old_locus_tag=AC00_2308 NZ_JJLU01000078.1 Protein Homology CDS 986 1843 . - 0 ID=cds-WP_071999244.1;Parent=gene-AC00_RS27805;Dbxref=GenBank:WP_071999244.1;Name=WP_071999244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231354.1;locus_tag=AC00_RS27805;product=zinc-dependent metalloprotease;protein_id=WP_071999244.1;transl_table=11 NZ_JJLU01000078.1 RefSeq gene 2214 3182 . + . ID=gene-AC00_RS13470;Name=AC00_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13470;old_locus_tag=AC00_2309 NZ_JJLU01000078.1 Protein Homology CDS 2214 3182 . + 0 ID=cds-WP_000654812.1;Parent=gene-AC00_RS13470;Dbxref=GenBank:WP_000654812.1;Name=WP_000654812.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=AC00_RS13470;product=IS5-like element IS903B family transposase;protein_id=WP_000654812.1;transl_table=11 NZ_JJLU01000078.1 RefSeq gene 3428 3633 . - . ID=gene-AC00_RS13465;Name=AC00_RS13465;end_range=3633,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13465;old_locus_tag=AC00_2310;partial=true NZ_JJLU01000078.1 Protein Homology CDS 3428 3633 . - 2 ID=cds-WP_000001233.1;Parent=gene-AC00_RS13465;Dbxref=GenBank:WP_000001233.1;Name=WP_000001233.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3633,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS13465;partial=true;product=IS1 family transposase;protein_id=WP_000001233.1;transl_table=11 ##sequence-region NZ_JJLU01000079.1 1 18881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000079.1 RefSeq region 1 18881 . + . ID=NZ_JJLU01000079.1:1..18881;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000079.1 RefSeq gene 1 200 . + . ID=gene-AC00_RS13460;Name=AC00_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13460;old_locus_tag=AC00_2311;partial=true;start_range=.,1 NZ_JJLU01000079.1 Protein Homology CDS 1 200 . + 2 ID=cds-WP_148725559.1;Parent=gene-AC00_RS13460;Dbxref=GenBank:WP_148725559.1;Name=WP_148725559.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS13460;partial=true;product=transposase;protein_id=WP_148725559.1;start_range=.,1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 648 1481 . + . ID=gene-AC00_RS13455;Name=AC00_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13455;old_locus_tag=AC00_2312 NZ_JJLU01000079.1 Protein Homology CDS 648 1481 . + 0 ID=cds-WP_050491478.1;Parent=gene-AC00_RS13455;Dbxref=GenBank:WP_050491478.1;Name=WP_050491478.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=AC00_RS13455;product=helix-turn-helix domain-containing protein;protein_id=WP_050491478.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 2852 3052 . + . ID=gene-AC00_RS30385;Name=AC00_RS30385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30385 NZ_JJLU01000079.1 Protein Homology CDS 2852 3052 . + 0 ID=cds-WP_001575762.1;Parent=gene-AC00_RS30385;Dbxref=GenBank:WP_001575762.1;Name=WP_001575762.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033650.1;locus_tag=AC00_RS30385;product=ANR family transcriptional regulator;protein_id=WP_001575762.1;transl_table=11 NZ_JJLU01000079.1 RefSeq pseudogene 3193 3564 . - . ID=gene-AC00_RS13450;Name=AC00_RS13450;end_range=3564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13450;old_locus_tag=AC00_2314;partial=true;pseudo=true NZ_JJLU01000079.1 Protein Homology CDS 3193 3564 . - 0 ID=cds-AC00_RS13450;Parent=gene-AC00_RS13450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0051920;end_range=3564,.;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843781.1;locus_tag=AC00_RS13450;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 NZ_JJLU01000079.1 RefSeq pseudogene 3552 3668 . - . ID=gene-AC00_RS31265;Name=AC00_RS31265;end_range=3668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31265;partial=true;pseudo=true;start_range=.,3552 NZ_JJLU01000079.1 Protein Homology CDS 3552 3668 . - 0 ID=cds-AC00_RS31265;Parent=gene-AC00_RS31265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851036.1;locus_tag=AC00_RS31265;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;start_range=.,3552;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 3792 4403 . - . ID=gene-AC00_RS30395;Name=AC00_RS30395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30395 NZ_JJLU01000079.1 Protein Homology CDS 3792 4403 . - 0 ID=cds-WP_148725560.1;Parent=gene-AC00_RS30395;Dbxref=GenBank:WP_148725560.1;Name=WP_148725560.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000837193.1;locus_tag=AC00_RS30395;product=type II secretion system protein;protein_id=WP_148725560.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 4825 5463 . + . ID=gene-AC00_RS13445;Name=AC00_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13445;old_locus_tag=AC00_2317 NZ_JJLU01000079.1 Protein Homology CDS 4825 5463 . + 0 ID=cds-WP_032250283.1;Parent=gene-AC00_RS13445;Dbxref=GenBank:WP_032250283.1;Name=WP_032250283.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=AC00_RS13445;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_032250283.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 5474 5890 . - . ID=gene-AC00_RS0124900;Name=AC00_RS0124900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124900 NZ_JJLU01000079.1 Protein Homology CDS 5474 5890 . - 0 ID=cds-WP_032299572.1;Parent=gene-AC00_RS0124900;Dbxref=GenBank:WP_032299572.1;Name=WP_032299572.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.6;locus_tag=AC00_RS0124900;product=lytic transglycosylase domain-containing protein;protein_id=WP_032299572.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 5878 6609 . - . ID=gene-AC00_RS0124905;Name=AC00_RS0124905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124905 NZ_JJLU01000079.1 Protein Homology CDS 5878 6609 . - 0 ID=cds-WP_032250284.1;Parent=gene-AC00_RS0124905;Dbxref=GenBank:WP_032250284.1;Name=WP_032250284.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575755.1;locus_tag=AC00_RS0124905;product=prepilin peptidase;protein_id=WP_032250284.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 6614 7579 . - . ID=gene-AC00_RS13440;Name=AC00_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13440;old_locus_tag=AC00_2319 NZ_JJLU01000079.1 Protein Homology CDS 6614 7579 . - 0 ID=cds-WP_001575754.1;Parent=gene-AC00_RS13440;Dbxref=GenBank:WP_001575754.1;Name=WP_001575754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575754.1;locus_tag=AC00_RS13440;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_001575754.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 7587 8657 . - . ID=gene-AC00_RS13435;Name=AC00_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13435;old_locus_tag=AC00_2320 NZ_JJLU01000079.1 Protein Homology CDS 7587 8657 . - 0 ID=cds-WP_032250285.1;Parent=gene-AC00_RS13435;Dbxref=GenBank:WP_032250285.1;Name=WP_032250285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575753.1;locus_tag=AC00_RS13435;product=type II secretion system F family protein;protein_id=WP_032250285.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 8650 10269 . - . ID=gene-AC00_RS13430;Name=AC00_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13430;old_locus_tag=AC00_2321 NZ_JJLU01000079.1 Protein Homology CDS 8650 10269 . - 0 ID=cds-WP_001575752.1;Parent=gene-AC00_RS13430;Dbxref=GenBank:WP_001575752.1;Name=WP_001575752.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575752.1;locus_tag=AC00_RS13430;product=GspE/PulE family protein;protein_id=WP_001575752.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 10284 10715 . - . ID=gene-AC00_RS0124910;Name=AC00_RS0124910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124910 NZ_JJLU01000079.1 GeneMarkS-2+ CDS 10284 10715 . - 0 ID=cds-WP_032250286.1;Parent=gene-AC00_RS0124910;Dbxref=GenBank:WP_032250286.1;Name=WP_032250286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0124910;product=hypothetical protein;protein_id=WP_032250286.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 10712 11977 . - . ID=gene-AC00_RS13425;Name=AC00_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13425;old_locus_tag=AC00_2322 NZ_JJLU01000079.1 GeneMarkS-2+ CDS 10712 11977 . - 0 ID=cds-WP_001575749.1;Parent=gene-AC00_RS13425;Dbxref=GenBank:WP_001575749.1;Name=WP_001575749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS13425;product=type 4b pilus protein PilO2;protein_id=WP_001575749.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 11979 13649 . - . ID=gene-AC00_RS13420;Name=AC00_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13420;old_locus_tag=AC00_2323 NZ_JJLU01000079.1 Protein Homology CDS 11979 13649 . - 0 ID=cds-WP_032282158.1;Parent=gene-AC00_RS13420;Dbxref=GenBank:WP_032282158.1;Name=WP_032282158.1;Ontology_term=GO:0009297,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575747.1;locus_tag=AC00_RS13420;product=secretin N-terminal domain-containing protein;protein_id=WP_032282158.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 13662 14309 . - . ID=gene-AC00_RS0124915;Name=AC00_RS0124915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124915 NZ_JJLU01000079.1 Protein Homology CDS 13662 14309 . - 0 ID=cds-WP_032282159.1;Parent=gene-AC00_RS0124915;Dbxref=GenBank:WP_032282159.1;Name=WP_032282159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022136.6;locus_tag=AC00_RS0124915;product=TcpQ domain-containing protein;protein_id=WP_032282159.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 14360 14992 . - . ID=gene-AC00_RS13415;Name=AC00_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13415;old_locus_tag=AC00_2324 NZ_JJLU01000079.1 Protein Homology CDS 14360 14992 . - 0 ID=cds-WP_333562656.1;Parent=gene-AC00_RS13415;Dbxref=GenBank:WP_333562656.1;Name=WP_333562656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575744.1;locus_tag=AC00_RS13415;product=type 4 pilus major pilin;protein_id=WP_333562656.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 15183 15992 . + . ID=gene-AC00_RS13410;Name=AC00_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13410;old_locus_tag=AC00_2325 NZ_JJLU01000079.1 GeneMarkS-2+ CDS 15183 15992 . + 0 ID=cds-WP_032250289.1;Parent=gene-AC00_RS13410;Dbxref=GenBank:WP_032250289.1;Name=WP_032250289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS13410;product=hypothetical protein;protein_id=WP_032250289.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 15982 16512 . + . ID=gene-AC00_RS13405;Name=AC00_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13405;old_locus_tag=AC00_2326 NZ_JJLU01000079.1 GeneMarkS-2+ CDS 15982 16512 . + 0 ID=cds-WP_032282161.1;Parent=gene-AC00_RS13405;Dbxref=GenBank:WP_032282161.1;Name=WP_032282161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS13405;product=hypothetical protein;protein_id=WP_032282161.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 16518 16937 . + . ID=gene-AC00_RS0124920;Name=AC00_RS0124920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124920 NZ_JJLU01000079.1 GeneMarkS-2+ CDS 16518 16937 . + 0 ID=cds-WP_032282162.1;Parent=gene-AC00_RS0124920;Dbxref=GenBank:WP_032282162.1;Name=WP_032282162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0124920;product=hypothetical protein;protein_id=WP_032282162.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 16934 17464 . + . ID=gene-AC00_RS0124925;Name=AC00_RS0124925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124925 NZ_JJLU01000079.1 GeneMarkS-2+ CDS 16934 17464 . + 0 ID=cds-WP_032282163.1;Parent=gene-AC00_RS0124925;Dbxref=GenBank:WP_032282163.1;Name=WP_032282163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0124925;product=type II secretion system protein;protein_id=WP_032282163.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 17418 17984 . + . ID=gene-AC00_RS0124930;Name=AC00_RS0124930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124930 NZ_JJLU01000079.1 GeneMarkS-2+ CDS 17418 17984 . + 0 ID=cds-WP_032282164.1;Parent=gene-AC00_RS0124930;Dbxref=GenBank:WP_032282164.1;Name=WP_032282164.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0124930;product=type IV pilus modification PilV family protein;protein_id=WP_032282164.1;transl_table=11 NZ_JJLU01000079.1 RefSeq gene 18174 18871 . + . ID=gene-AC00_RS13400;Name=AC00_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13400;old_locus_tag=AC00_2328 NZ_JJLU01000079.1 Protein Homology CDS 18174 18423 . + 0 ID=cds-WP_248790346.1;Parent=gene-AC00_RS13400;Dbxref=GenBank:WP_248790346.1;Name=WP_248790346.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS13400;product=IS1 family transposase;protein_id=WP_248790346.1;transl_table=11 NZ_JJLU01000079.1 Protein Homology CDS 18423 18871 . + 2 ID=cds-WP_248790346.1;Parent=gene-AC00_RS13400;Dbxref=GenBank:WP_248790346.1;Name=WP_248790346.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS13400;product=IS1 family transposase;protein_id=WP_248790346.1;transl_table=11 ##sequence-region NZ_JJLU01000080.1 1 55099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000080.1 RefSeq region 1 55099 . + . ID=NZ_JJLU01000080.1:1..55099;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000080.1 RefSeq gene 1 259 . + . ID=gene-AC00_RS13395;Name=AC00_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13395;old_locus_tag=AC00_2329;partial=true;start_range=.,1 NZ_JJLU01000080.1 Protein Homology CDS 1 259 . + 1 ID=cds-WP_001510179.1-2;Parent=gene-AC00_RS13395;Dbxref=GenBank:WP_001510179.1;Name=WP_001510179.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS13395;partial=true;product=IS1 family transposase;protein_id=WP_001510179.1;start_range=.,1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 433 1323 . - . ID=gene-AC00_RS13390;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=AC00_RS13390;old_locus_tag=AC00_2330 NZ_JJLU01000080.1 Protein Homology CDS 433 1323 . - 0 ID=cds-WP_032281158.1;Parent=gene-AC00_RS13390;Dbxref=GenBank:WP_032281158.1;Name=WP_032281158.1;gbkey=CDS;gene=galF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538012.1;locus_tag=AC00_RS13390;product=UTP--glucose-1-phosphate uridylyltransferase GalF;protein_id=WP_032281158.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 1458 2855 . - . ID=gene-AC00_RS13385;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=AC00_RS13385;old_locus_tag=AC00_2331 NZ_JJLU01000080.1 Protein Homology CDS 1458 2855 . - 0 ID=cds-WP_032281159.1;Parent=gene-AC00_RS13385;Dbxref=GenBank:WP_032281159.1;Name=WP_032281159.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575915.1;locus_tag=AC00_RS13385;product=colanic acid biosynthesis protein WcaM;protein_id=WP_032281159.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 2865 4088 . - . ID=gene-AC00_RS13380;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=AC00_RS13380;old_locus_tag=AC00_2332 NZ_JJLU01000080.1 Protein Homology CDS 2865 4088 . - 0 ID=cds-WP_032281160.1;Parent=gene-AC00_RS13380;Dbxref=GenBank:WP_032281160.1;Name=WP_032281160.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575917.1;locus_tag=AC00_RS13380;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_032281160.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 4085 5365 . - . ID=gene-AC00_RS13375;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=AC00_RS13375;old_locus_tag=AC00_2333 NZ_JJLU01000080.1 Protein Homology CDS 4085 5365 . - 0 ID=cds-WP_032281161.1;Parent=gene-AC00_RS13375;Dbxref=GenBank:WP_032281161.1;Name=WP_032281161.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461046.1;locus_tag=AC00_RS13375;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_032281161.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 5508 6989 . - . ID=gene-AC00_RS13370;Name=AC00_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13370;old_locus_tag=AC00_2334 NZ_JJLU01000080.1 Protein Homology CDS 5508 6989 . - 0 ID=cds-WP_032281162.1;Parent=gene-AC00_RS13370;Dbxref=GenBank:WP_032281162.1;Name=WP_032281162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575919.1;locus_tag=AC00_RS13370;product=MOP flippase family protein;protein_id=WP_032281162.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 6999 8393 . - . ID=gene-AC00_RS13365;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=AC00_RS13365;old_locus_tag=AC00_2335 NZ_JJLU01000080.1 Protein Homology CDS 6999 8393 . - 0 ID=cds-WP_001575921.1;Parent=gene-AC00_RS13365;Dbxref=GenBank:WP_001575921.1;Name=WP_001575921.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=AC00_RS13365;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_001575921.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 8526 9896 . - . ID=gene-AC00_RS13360;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=AC00_RS13360;old_locus_tag=AC00_2336 NZ_JJLU01000080.1 Protein Homology CDS 8526 9896 . - 0 ID=cds-WP_032281163.1;Parent=gene-AC00_RS13360;Dbxref=GenBank:WP_032281163.1;Name=WP_032281163.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310880.1;locus_tag=AC00_RS13360;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_032281163.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 10000 11436 . - . ID=gene-AC00_RS13355;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=AC00_RS13355;old_locus_tag=AC00_2337 NZ_JJLU01000080.1 Protein Homology CDS 10000 11436 . - 0 ID=cds-WP_032281165.1;Parent=gene-AC00_RS13355;Dbxref=GenBank:WP_032281165.1;Name=WP_032281165.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=AC00_RS13355;product=mannose-1-phosphate guanyltransferase;protein_id=WP_032281165.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 11440 12663 . - . ID=gene-AC00_RS13350;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=AC00_RS13350;old_locus_tag=AC00_2338 NZ_JJLU01000080.1 Protein Homology CDS 11440 12663 . - 0 ID=cds-WP_032281166.1;Parent=gene-AC00_RS13350;Dbxref=GenBank:WP_032281166.1;Name=WP_032281166.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=AC00_RS13350;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_032281166.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 12660 13139 . - . ID=gene-AC00_RS13345;Name=AC00_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13345;old_locus_tag=AC00_2339 NZ_JJLU01000080.1 Protein Homology CDS 12660 13139 . - 0 ID=cds-WP_032281167.1;Parent=gene-AC00_RS13345;Dbxref=GenBank:WP_032281167.1;Name=WP_032281167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707946.2;locus_tag=AC00_RS13345;product=GDP-mannose mannosyl hydrolase;protein_id=WP_032281167.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 13143 14108 . - . ID=gene-AC00_RS13340;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=AC00_RS13340;old_locus_tag=AC00_2340 NZ_JJLU01000080.1 Protein Homology CDS 13143 14108 . - 0 ID=cds-WP_032281168.1;Parent=gene-AC00_RS13340;Dbxref=GenBank:WP_032281168.1;Name=WP_032281168.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310884.1;locus_tag=AC00_RS13340;product=GDP-L-fucose synthase;protein_id=WP_032281168.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 14111 15232 . - . ID=gene-AC00_RS13335;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AC00_RS13335;old_locus_tag=AC00_2341 NZ_JJLU01000080.1 Protein Homology CDS 14111 15232 . - 0 ID=cds-WP_032281169.1;Parent=gene-AC00_RS13335;Dbxref=GenBank:WP_032281169.1;Name=WP_032281169.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=AC00_RS13335;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_032281169.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 15257 15811 . - . ID=gene-AC00_RS13330;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=AC00_RS13330;old_locus_tag=AC00_2342 NZ_JJLU01000080.1 Protein Homology CDS 15257 15811 . - 0 ID=cds-WP_032281170.1;Parent=gene-AC00_RS13330;Dbxref=GenBank:WP_032281170.1;Name=WP_032281170.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461055.1;locus_tag=AC00_RS13330;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_032281170.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 15821 16567 . - . ID=gene-AC00_RS13325;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=AC00_RS13325;old_locus_tag=AC00_2343 NZ_JJLU01000080.1 Protein Homology CDS 15821 16567 . - 0 ID=cds-WP_032281172.1;Parent=gene-AC00_RS13325;Dbxref=GenBank:WP_032281172.1;Name=WP_032281172.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007731946.1;locus_tag=AC00_RS13325;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_032281172.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 16576 17799 . - . ID=gene-AC00_RS13320;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=AC00_RS13320;old_locus_tag=AC00_2344 NZ_JJLU01000080.1 Protein Homology CDS 16576 17799 . - 0 ID=cds-WP_032281173.1;Parent=gene-AC00_RS13320;Dbxref=GenBank:WP_032281173.1;Name=WP_032281173.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575934.1;locus_tag=AC00_RS13320;product=colanic acid polymerase WcaD;protein_id=WP_032281173.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 17774 18991 . - . ID=gene-AC00_RS13315;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=AC00_RS13315;old_locus_tag=AC00_2345 NZ_JJLU01000080.1 Protein Homology CDS 17774 18991 . - 0 ID=cds-WP_032281174.1;Parent=gene-AC00_RS13315;Dbxref=GenBank:WP_032281174.1;Name=WP_032281174.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416561.1;locus_tag=AC00_RS13315;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_032281174.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 18988 19479 . - . ID=gene-AC00_RS13310;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=AC00_RS13310;old_locus_tag=AC00_2346 NZ_JJLU01000080.1 Protein Homology CDS 18988 19479 . - 0 ID=cds-WP_032281175.1;Parent=gene-AC00_RS13310;Dbxref=GenBank:WP_032281175.1;Name=WP_032281175.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386763.1;locus_tag=AC00_RS13310;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_032281175.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 19479 20321 . - . ID=gene-AC00_RS13305;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=AC00_RS13305;old_locus_tag=AC00_2347 NZ_JJLU01000080.1 Protein Homology CDS 19479 20321 . - 0 ID=cds-WP_001575937.1;Parent=gene-AC00_RS13305;Dbxref=GenBank:WP_001575937.1;Name=WP_001575937.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=AC00_RS13305;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_001575937.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 20450 22612 . - . ID=gene-AC00_RS13300;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=AC00_RS13300;old_locus_tag=AC00_2349 NZ_JJLU01000080.1 Protein Homology CDS 20450 22612 . - 0 ID=cds-WP_032281176.1;Parent=gene-AC00_RS13300;Dbxref=GenBank:WP_032281176.1;Name=WP_032281176.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=AC00_RS13300;product=tyrosine-protein kinase Wzc;protein_id=WP_032281176.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 22615 23058 . - . ID=gene-AC00_RS13295;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=AC00_RS13295;old_locus_tag=AC00_2350 NZ_JJLU01000080.1 Protein Homology CDS 22615 23058 . - 0 ID=cds-WP_032281177.1;Parent=gene-AC00_RS13295;Dbxref=GenBank:WP_032281177.1;Name=WP_032281177.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884509.1;locus_tag=AC00_RS13295;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_032281177.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 23064 24197 . - . ID=gene-AC00_RS13290;Name=AC00_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13290;old_locus_tag=AC00_2351 NZ_JJLU01000080.1 Protein Homology CDS 23064 24197 . - 0 ID=cds-WP_024193904.1;Parent=gene-AC00_RS13290;Dbxref=GenBank:WP_024193904.1;Name=WP_024193904.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=AC00_RS13290;product=polysaccharide export protein;protein_id=WP_024193904.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 24841 26421 . + . ID=gene-AC00_RS13285;Name=yegH;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=AC00_RS13285;old_locus_tag=AC00_2354 NZ_JJLU01000080.1 Protein Homology CDS 24841 26421 . + 0 ID=cds-WP_032281178.1;Parent=gene-AC00_RS13285;Dbxref=GenBank:WP_032281178.1;Name=WP_032281178.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yegH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310895.2;locus_tag=AC00_RS13285;product=TerC family protein;protein_id=WP_032281178.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 26461 28305 . - . ID=gene-AC00_RS13280;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=AC00_RS13280;old_locus_tag=AC00_2355 NZ_JJLU01000080.1 Protein Homology CDS 26461 28305 . - 0 ID=cds-WP_032288229.1;Parent=gene-AC00_RS13280;Dbxref=GenBank:WP_032288229.1;Name=WP_032288229.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912440.1;locus_tag=AC00_RS13280;product=outer membrane assembly protein AsmA;protein_id=WP_032288229.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 28332 28913 . - . ID=gene-AC00_RS13275;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AC00_RS13275;old_locus_tag=AC00_2356 NZ_JJLU01000080.1 Protein Homology CDS 28332 28913 . - 0 ID=cds-WP_032281180.1;Parent=gene-AC00_RS13275;Dbxref=GenBank:WP_032281180.1;Name=WP_032281180.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=AC00_RS13275;product=dCTP deaminase;protein_id=WP_032281180.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 28991 29632 . - . ID=gene-AC00_RS13270;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=AC00_RS13270;old_locus_tag=AC00_2357 NZ_JJLU01000080.1 Protein Homology CDS 28991 29632 . - 0 ID=cds-WP_032281181.1;Parent=gene-AC00_RS13270;Dbxref=GenBank:WP_032281181.1;Name=WP_032281181.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=AC00_RS13270;product=uridine kinase;protein_id=WP_032281181.1;transl_table=11 NZ_JJLU01000080.1 RefSeq pseudogene 30000 32230 . + . ID=gene-AC00_RS0124935;Name=AC00_RS0124935;end_range=32230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0124935;old_locus_tag=AC00_2358;partial=true;pseudo=true NZ_JJLU01000080.1 Protein Homology CDS 30000 32230 . + 0 ID=cds-AC00_RS0124935;Parent=gene-AC00_RS0124935;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=32230,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365628.1;locus_tag=AC00_RS0124935;partial=true;product=PAS domain S-box protein;pseudo=true;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 32212 33069 . - . ID=gene-AC00_RS13265;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=AC00_RS13265;old_locus_tag=AC00_2359 NZ_JJLU01000080.1 Protein Homology CDS 32212 33069 . - 0 ID=cds-WP_001575948.1;Parent=gene-AC00_RS13265;Dbxref=GenBank:WP_001575948.1;Name=WP_001575948.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575948.1;locus_tag=AC00_RS13265;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_001575948.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 33218 34570 . + . ID=gene-AC00_RS13260;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=AC00_RS13260;old_locus_tag=AC00_2360 NZ_JJLU01000080.1 Protein Homology CDS 33218 34570 . + 0 ID=cds-WP_001575949.1;Parent=gene-AC00_RS13260;Dbxref=GenBank:WP_001575949.1;Name=WP_001575949.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004864597.1;locus_tag=AC00_RS13260;product=molecular chaperone;protein_id=WP_001575949.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 34653 34712 . - . ID=gene-AC00_RS31740;Name=AC00_RS31740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31740 NZ_JJLU01000080.1 Protein Homology CDS 34653 34712 . - 0 ID=cds-WP_112919032.1;Parent=gene-AC00_RS31740;Dbxref=GenBank:WP_112919032.1;Name=WP_112919032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025322.6;locus_tag=AC00_RS31740;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_112919032.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 34965 36218 . + . ID=gene-AC00_RS13255;Name=AC00_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13255;old_locus_tag=AC00_2361 NZ_JJLU01000080.1 Protein Homology CDS 34965 36218 . + 0 ID=cds-WP_001575951.1;Parent=gene-AC00_RS13255;Dbxref=GenBank:WP_001575951.1;Name=WP_001575951.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575951.1;locus_tag=AC00_RS13255;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001575951.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 36218 39340 . + . ID=gene-AC00_RS13250;Name=mdtB;gbkey=Gene;gene=mdtB;gene_biotype=protein_coding;locus_tag=AC00_RS13250;old_locus_tag=AC00_2362 NZ_JJLU01000080.1 Protein Homology CDS 36218 39340 . + 0 ID=cds-WP_032281182.1;Parent=gene-AC00_RS13250;Dbxref=GenBank:WP_032281182.1;Name=WP_032281182.1;gbkey=CDS;gene=mdtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416579.1;locus_tag=AC00_RS13250;product=multidrug efflux RND transporter permease subunit MdtB;protein_id=WP_032281182.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 39341 42418 . + . ID=gene-AC00_RS13245;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=AC00_RS13245;old_locus_tag=AC00_2363 NZ_JJLU01000080.1 Protein Homology CDS 39341 42418 . + 0 ID=cds-WP_032281183.1;Parent=gene-AC00_RS13245;Dbxref=GenBank:WP_032281183.1;Name=WP_032281183.1;gbkey=CDS;gene=mdtC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416580.1;locus_tag=AC00_RS13245;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_032281183.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 42419 43834 . + . ID=gene-AC00_RS13240;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AC00_RS13240;old_locus_tag=AC00_2364 NZ_JJLU01000080.1 Protein Homology CDS 42419 43834 . + 0 ID=cds-WP_032281184.1;Parent=gene-AC00_RS13240;Dbxref=GenBank:WP_032281184.1;Name=WP_032281184.1;gbkey=CDS;gene=mdtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416581.1;locus_tag=AC00_RS13240;product=MFS transporter;protein_id=WP_032281184.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 43831 45234 . + . ID=gene-AC00_RS13235;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=AC00_RS13235;old_locus_tag=AC00_2365 NZ_JJLU01000080.1 Protein Homology CDS 43831 45234 . + 0 ID=cds-WP_032281185.1;Parent=gene-AC00_RS13235;Dbxref=GenBank:WP_032281185.1;Name=WP_032281185.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416582.1;locus_tag=AC00_RS13235;product=two-component system sensor histidine kinase BaeS;protein_id=WP_032281185.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 45231 45953 . + . ID=gene-AC00_RS13230;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=AC00_RS13230;old_locus_tag=AC00_2366 NZ_JJLU01000080.1 Protein Homology CDS 45231 45953 . + 0 ID=cds-WP_000137873.1;Parent=gene-AC00_RS13230;Dbxref=GenBank:WP_000137873.1;Name=WP_000137873.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416583.1;locus_tag=AC00_RS13230;product=two-component system response regulator BaeR;protein_id=WP_000137873.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 46144 46476 . + . ID=gene-AC00_RS13225;Name=yegP;gbkey=Gene;gene=yegP;gene_biotype=protein_coding;locus_tag=AC00_RS13225;old_locus_tag=AC00_2368 NZ_JJLU01000080.1 Protein Homology CDS 46144 46476 . + 0 ID=cds-WP_000929408.1;Parent=gene-AC00_RS13225;Dbxref=GenBank:WP_000929408.1;Name=WP_000929408.1;gbkey=CDS;gene=yegP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310915.2;locus_tag=AC00_RS13225;product=YegP family protein;protein_id=WP_000929408.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 46685 46981 . + . ID=gene-AC00_RS13220;Name=AC00_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13220;old_locus_tag=AC00_2369 NZ_JJLU01000080.1 Protein Homology CDS 46685 46981 . + 0 ID=cds-WP_101969457.1;Parent=gene-AC00_RS13220;Dbxref=GenBank:WP_101969457.1;Name=WP_101969457.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307279.1;locus_tag=AC00_RS13220;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_101969457.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 46983 47279 . + . ID=gene-AC00_RS13215;Name=AC00_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13215;old_locus_tag=AC00_2370 NZ_JJLU01000080.1 Protein Homology CDS 46983 47279 . + 0 ID=cds-WP_001220181.1;Parent=gene-AC00_RS13215;Dbxref=GenBank:WP_001220181.1;Name=WP_001220181.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001220181.1;locus_tag=AC00_RS13215;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_001220181.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 47382 48743 . + . ID=gene-AC00_RS13210;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=AC00_RS13210;old_locus_tag=AC00_2371 NZ_JJLU01000080.1 Protein Homology CDS 47382 48743 . + 0 ID=cds-WP_000476014.1;Parent=gene-AC00_RS13210;Dbxref=GenBank:WP_000476014.1;Name=WP_000476014.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=AC00_RS13210;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_000476014.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 49073 49390 . - . ID=gene-AC00_RS13205;Name=AC00_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13205;old_locus_tag=AC00_2372 NZ_JJLU01000080.1 Protein Homology CDS 49073 49390 . - 0 ID=cds-WP_077757397.1;Parent=gene-AC00_RS13205;Dbxref=GenBank:WP_077757397.1;Name=WP_077757397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310918.2;locus_tag=AC00_RS13205;product=hypothetical protein;protein_id=WP_077757397.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 49796 50695 . + . ID=gene-AC00_RS13200;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=AC00_RS13200;old_locus_tag=AC00_2373 NZ_JJLU01000080.1 Protein Homology CDS 49796 50695 . + 0 ID=cds-WP_000807373.1;Parent=gene-AC00_RS13200;Dbxref=GenBank:WP_000807373.1;Name=WP_000807373.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310919.1;locus_tag=AC00_RS13200;product=lipid kinase YegS;protein_id=WP_000807373.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 50777 51550 . - . ID=gene-AC00_RS13195;Name=AC00_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13195;old_locus_tag=AC00_2374 NZ_JJLU01000080.1 Protein Homology CDS 50777 51550 . - 0 ID=cds-WP_001295426.1;Parent=gene-AC00_RS13195;Dbxref=GenBank:WP_001295426.1;Name=WP_001295426.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083894.1;locus_tag=AC00_RS13195;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001295426.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 51656 52696 . - . ID=gene-AC00_RS13190;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=AC00_RS13190;old_locus_tag=AC00_2375 NZ_JJLU01000080.1 Protein Homology CDS 51656 52696 . - 0 ID=cds-WP_032281188.1;Parent=gene-AC00_RS13190;Dbxref=GenBank:WP_032281188.1;Name=WP_032281188.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310921.1;locus_tag=AC00_RS13190;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_032281188.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 52744 54099 . - . ID=gene-AC00_RS13185;Name=AC00_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13185;old_locus_tag=AC00_2376 NZ_JJLU01000080.1 Protein Homology CDS 52744 54099 . - 0 ID=cds-WP_032281189.1;Parent=gene-AC00_RS13185;Dbxref=GenBank:WP_032281189.1;Name=WP_032281189.1;Ontology_term=GO:0009401,GO:0015796,GO:0015577,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=galactitol transmembrane transporter activity|0015577||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,galactitol transmembrane transport|0015796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310922.1;locus_tag=AC00_RS13185;product=PTS galactitol transporter subunit IIC;protein_id=WP_032281189.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 54103 54387 . - . ID=gene-AC00_RS13180;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AC00_RS13180;old_locus_tag=AC00_2377 NZ_JJLU01000080.1 Protein Homology CDS 54103 54387 . - 0 ID=cds-WP_000823272.1;Parent=gene-AC00_RS13180;Dbxref=GenBank:WP_000823272.1;Name=WP_000823272.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416596.1;locus_tag=AC00_RS13180;product=PTS galactitol transporter subunit IIB;protein_id=WP_000823272.1;transl_table=11 NZ_JJLU01000080.1 RefSeq gene 54418 54807 . - . ID=gene-AC00_RS13175;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AC00_RS13175;old_locus_tag=AC00_2378 NZ_JJLU01000080.1 Protein Homology CDS 54418 54807 . - 0 ID=cds-WP_262020862.1;Parent=gene-AC00_RS13175;Dbxref=GenBank:WP_262020862.1;Name=WP_262020862.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729513.1;locus_tag=AC00_RS13175;product=PTS galactitol transporter subunit IIA;protein_id=WP_262020862.1;transl_table=11 NZ_JJLU01000080.1 RefSeq pseudogene 54963 55099 . - . ID=gene-AC00_RS29620;Name=AC00_RS29620;end_range=55099,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29620;old_locus_tag=AC00_2379;partial=true;pseudo=true NZ_JJLU01000080.1 Protein Homology CDS 54963 55099 . - 2 ID=cds-AC00_RS29620;Parent=gene-AC00_RS29620;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=55099,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS29620;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000081.1 1 13298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000081.1 RefSeq region 1 13298 . + . ID=NZ_JJLU01000081.1:1..13298;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000081.1 RefSeq pseudogene 1 477 . - . ID=gene-AC00_RS13165;Name=AC00_RS13165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13165;old_locus_tag=AC00_2380;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000081.1 Protein Homology CDS 1 477 . - 0 ID=cds-AC00_RS13165;Parent=gene-AC00_RS13165;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS13165;partial=true;product=IS5-like element ISKpn26 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 613 1875 . - . ID=gene-AC00_RS13160;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=AC00_RS13160;old_locus_tag=AC00_2381 NZ_JJLU01000081.1 Protein Homology CDS 613 1875 . - 0 ID=cds-WP_032281192.1;Parent=gene-AC00_RS13160;Dbxref=GenBank:WP_032281192.1;Name=WP_032281192.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416598.1;locus_tag=AC00_RS13160;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_032281192.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 1904 2758 . - . ID=gene-AC00_RS13155;Name=gatY;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=AC00_RS13155;old_locus_tag=AC00_2382 NZ_JJLU01000081.1 Protein Homology CDS 1904 2758 . - 0 ID=cds-WP_000289788.1;Parent=gene-AC00_RS13155;Dbxref=GenBank:WP_000289788.1;Name=WP_000289788.1;gbkey=CDS;gene=gatY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416599.2;locus_tag=AC00_RS13155;product=tagatose-bisphosphate aldolase subunit GatY;protein_id=WP_000289788.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 2987 4039 . - . ID=gene-AC00_RS13150;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=AC00_RS13150;old_locus_tag=AC00_2383 NZ_JJLU01000081.1 Protein Homology CDS 2987 4039 . - 0 ID=cds-WP_000129551.1;Parent=gene-AC00_RS13150;Dbxref=GenBank:WP_000129551.1;Name=WP_000129551.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=AC00_RS13150;product=class I fructose-bisphosphate aldolase;protein_id=WP_000129551.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 4296 5573 . + . ID=gene-AC00_RS13145;Name=yegT;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=AC00_RS13145;old_locus_tag=AC00_2384 NZ_JJLU01000081.1 Protein Homology CDS 4296 5573 . + 0 ID=cds-WP_000858484.1;Parent=gene-AC00_RS13145;Dbxref=GenBank:WP_000858484.1;Name=WP_000858484.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;gene=yegT;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416601.1;locus_tag=AC00_RS13145;product=nucleoside permease;protein_id=WP_000858484.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 5570 6574 . + . ID=gene-AC00_RS13140;Name=yegU;gbkey=Gene;gene=yegU;gene_biotype=protein_coding;locus_tag=AC00_RS13140;old_locus_tag=AC00_2385 NZ_JJLU01000081.1 Protein Homology CDS 5570 6574 . + 0 ID=cds-WP_000846245.1;Parent=gene-AC00_RS13140;Dbxref=GenBank:WP_000846245.1;Name=WP_000846245.1;gbkey=CDS;gene=yegU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=AC00_RS13140;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_000846245.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 6571 7536 . + . ID=gene-AC00_RS13135;Name=yegV;gbkey=Gene;gene=yegV;gene_biotype=protein_coding;locus_tag=AC00_RS13135;old_locus_tag=AC00_2386 NZ_JJLU01000081.1 Protein Homology CDS 6571 7536 . + 0 ID=cds-WP_000011997.1;Parent=gene-AC00_RS13135;Dbxref=GenBank:WP_000011997.1;Name=WP_000011997.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;gene=yegV;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416603.1;locus_tag=AC00_RS13135;product=carbohydrate kinase family protein;protein_id=WP_000011997.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 7510 8256 . - . ID=gene-AC00_RS13130;Name=yegW;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=AC00_RS13130;old_locus_tag=AC00_2387 NZ_JJLU01000081.1 Protein Homology CDS 7510 8256 . - 0 ID=cds-WP_032281193.1;Parent=gene-AC00_RS13130;Dbxref=GenBank:WP_032281193.1;Name=WP_032281193.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yegW;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=AC00_RS13130;product=GntR family transcriptional regulator;protein_id=WP_032281193.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 8308 9126 . - . ID=gene-AC00_RS13125;Name=yegX;gbkey=Gene;gene=yegX;gene_biotype=protein_coding;locus_tag=AC00_RS13125;old_locus_tag=AC00_2388 NZ_JJLU01000081.1 Protein Homology CDS 8308 9126 . - 0 ID=cds-WP_001307284.1;Parent=gene-AC00_RS13125;Dbxref=GenBank:WP_001307284.1;Name=WP_001307284.1;gbkey=CDS;gene=yegX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416605.2;locus_tag=AC00_RS13125;product=glycoside hydrolase family 25 protein;protein_id=WP_001307284.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 9191 9991 . - . ID=gene-AC00_RS13120;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=AC00_RS13120;old_locus_tag=AC00_2389 NZ_JJLU01000081.1 Protein Homology CDS 9191 9991 . - 0 ID=cds-WP_032281194.1;Parent=gene-AC00_RS13120;Dbxref=GenBank:WP_032281194.1;Name=WP_032281194.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416606.1;locus_tag=AC00_RS13120;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_032281194.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 9988 10776 . - . ID=gene-AC00_RS13115;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=AC00_RS13115;old_locus_tag=AC00_2390 NZ_JJLU01000081.1 Protein Homology CDS 9988 10776 . - 0 ID=cds-WP_001195564.1;Parent=gene-AC00_RS13115;Dbxref=GenBank:WP_001195564.1;Name=WP_001195564.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416607.1;locus_tag=AC00_RS13115;product=hydroxyethylthiazole kinase;protein_id=WP_001195564.1;transl_table=11 NZ_JJLU01000081.1 cmsearch riboswitch 10811 10907 . - . ID=id-NZ_JJLU01000081.1:10811..10907;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLU01000081.1 RefSeq gene 10999 11271 . - . ID=gene-AC00_RS13110;Name=rcnR;gbkey=Gene;gene=rcnR;gene_biotype=protein_coding;locus_tag=AC00_RS13110;old_locus_tag=AC00_2391 NZ_JJLU01000081.1 Protein Homology CDS 10999 11271 . - 0 ID=cds-WP_000019944.1;Parent=gene-AC00_RS13110;Dbxref=GenBank:WP_000019944.1;Name=WP_000019944.1;gbkey=CDS;gene=rcnR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310938.1;locus_tag=AC00_RS13110;product=Ni(II)/Co(II)-binding transcriptional repressor RcnR;protein_id=WP_000019944.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 11392 12216 . + . ID=gene-AC00_RS13105;Name=rcnA;gbkey=Gene;gene=rcnA;gene_biotype=protein_coding;locus_tag=AC00_RS13105;old_locus_tag=AC00_2392 NZ_JJLU01000081.1 Protein Homology CDS 11392 12216 . + 0 ID=cds-WP_032281195.1;Parent=gene-AC00_RS13105;Dbxref=GenBank:WP_032281195.1;Name=WP_032281195.1;gbkey=CDS;gene=rcnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416609.1;locus_tag=AC00_RS13105;product=nickel/cobalt efflux protein RcnA;protein_id=WP_032281195.1;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 12435 12773 . + . ID=gene-AC00_RS13100;Name=rcnB;gbkey=Gene;gene=rcnB;gene_biotype=protein_coding;locus_tag=AC00_RS13100;old_locus_tag=AC00_2393 NZ_JJLU01000081.1 Protein Homology CDS 12435 12773 . + 0 ID=cds-WP_000153067.1;Parent=gene-AC00_RS13100;Dbxref=GenBank:WP_000153067.1;Name=WP_000153067.1;gbkey=CDS;gene=rcnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416610.4;locus_tag=AC00_RS13100;product=Ni(II)/Co(II) efflux transporter accessory subunit RcnB;protein_id=WP_000153067.1;transl_table=11 NZ_JJLU01000081.1 RefSeq pseudogene 12855 13007 . - . ID=gene-AC00_RS30405;Name=AC00_RS30405;end_range=13007,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30405;partial=true;pseudo=true NZ_JJLU01000081.1 Protein Homology CDS 12855 13007 . - 0 ID=cds-AC00_RS30405;Parent=gene-AC00_RS30405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007155,GO:0009289;end_range=13007,.;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416611.1;locus_tag=AC00_RS30405;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_JJLU01000081.1 RefSeq gene 13019 13298 . - . ID=gene-AC00_RS13095;Name=AC00_RS13095;end_range=13298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13095;old_locus_tag=AC00_2394;partial=true NZ_JJLU01000081.1 Protein Homology CDS 13019 13298 . - 1 ID=cds-WP_000431025.1-2;Parent=gene-AC00_RS13095;Dbxref=GenBank:WP_000431025.1;Name=WP_000431025.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=13298,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS13095;partial=true;product=IS1 family transposase;protein_id=WP_000431025.1;transl_table=11 ##sequence-region NZ_JJLU01000082.1 1 4009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000082.1 RefSeq region 1 4009 . + . ID=NZ_JJLU01000082.1:1..4009;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000082.1 RefSeq gene 1 201 . - . ID=gene-AC00_RS13090;Name=AC00_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13090;old_locus_tag=AC00_2395;partial=true;start_range=.,1 NZ_JJLU01000082.1 Protein Homology CDS 1 201 . - 0 ID=cds-WP_000179200.1-2;Parent=gene-AC00_RS13090;Dbxref=GenBank:WP_000179200.1;Name=WP_000179200.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS13090;partial=true;product=IS1 family transposase;protein_id=WP_000179200.1;start_range=.,1;transl_table=11 NZ_JJLU01000082.1 RefSeq gene 398 1507 . - . ID=gene-AC00_RS13085;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=AC00_RS13085;old_locus_tag=AC00_2396 NZ_JJLU01000082.1 Protein Homology CDS 398 1507 . - 0 ID=cds-WP_001005448.1;Parent=gene-AC00_RS13085;Dbxref=GenBank:WP_001005448.1;Name=WP_001005448.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=AC00_RS13085;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_001005448.1;transl_table=11 NZ_JJLU01000082.1 RefSeq gene 1639 3672 . + . ID=gene-AC00_RS13080;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AC00_RS13080;old_locus_tag=AC00_2397 NZ_JJLU01000082.1 Protein Homology CDS 1639 3672 . + 0 ID=cds-WP_001295427.1;Parent=gene-AC00_RS13080;Dbxref=GenBank:WP_001295427.1;Name=WP_001295427.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=AC00_RS13080;product=methionine--tRNA ligase;protein_id=WP_001295427.1;transl_table=11 NZ_JJLU01000082.1 RefSeq gene 3759 4009 . - . ID=gene-AC00_RS13075;Name=AC00_RS13075;end_range=4009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS13075;old_locus_tag=AC00_2398;partial=true NZ_JJLU01000082.1 Protein Homology CDS 3759 4009 . - 2 ID=cds-WP_000675026.1-2;Parent=gene-AC00_RS13075;Dbxref=GenBank:WP_000675026.1;Name=WP_000675026.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4009,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS13075;partial=true;product=IS1 family transposase;protein_id=WP_000675026.1;transl_table=11 ##sequence-region NZ_JJLU01000083.1 1 161580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000083.1 RefSeq region 1 161580 . + . ID=NZ_JJLU01000083.1:1..161580;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000083.1 RefSeq gene 1 218 . - . ID=gene-AC00_RS0124955;Name=AC00_RS0124955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0124955;old_locus_tag=AC00_2399;partial=true;start_range=.,1 NZ_JJLU01000083.1 Protein Homology CDS 1 218 . - 0 ID=cds-WP_001395569.1-2;Parent=gene-AC00_RS0124955;Dbxref=GenBank:WP_001395569.1;Name=WP_001395569.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0124955;partial=true;product=IS1 family transposase;protein_id=WP_001395569.1;start_range=.,1;transl_table=11 NZ_JJLU01000083.1 RefSeq pseudogene 262 768 . + . ID=gene-AC00_RS13070;Name=AC00_RS13070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS13070;old_locus_tag=AC00_2400;partial=true;pseudo=true;start_range=.,262 NZ_JJLU01000083.1 Protein Homology CDS 262 768 . + 0 ID=cds-AC00_RS13070;Parent=gene-AC00_RS13070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708010.2;locus_tag=AC00_RS13070;partial=true;product=SWIM zinc finger family protein;pseudo=true;start_range=.,262;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 893 1354 . + . ID=gene-AC00_RS13065;Name=yehR;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=AC00_RS13065;old_locus_tag=AC00_2401 NZ_JJLU01000083.1 Protein Homology CDS 893 1354 . + 0 ID=cds-WP_001295429.1;Parent=gene-AC00_RS13065;Dbxref=GenBank:WP_001295429.1;Name=WP_001295429.1;gbkey=CDS;gene=yehR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416627.2;locus_tag=AC00_RS13065;product=YehR family lipoprotein;protein_id=WP_001295429.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 1395 1865 . - . ID=gene-AC00_RS13060;Name=yehS;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=AC00_RS13060;old_locus_tag=AC00_2402 NZ_JJLU01000083.1 Protein Homology CDS 1395 1865 . - 0 ID=cds-WP_001295430.1;Parent=gene-AC00_RS13060;Dbxref=GenBank:WP_001295430.1;Name=WP_001295430.1;gbkey=CDS;gene=yehS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310962.1;locus_tag=AC00_RS13060;product=DUF1456 family protein;protein_id=WP_001295430.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 1912 2631 . - . ID=gene-AC00_RS13055;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=AC00_RS13055;old_locus_tag=AC00_2403 NZ_JJLU01000083.1 Protein Homology CDS 1912 2631 . - 0 ID=cds-WP_000598641.1;Parent=gene-AC00_RS13055;Dbxref=GenBank:WP_000598641.1;Name=WP_000598641.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310963.2;locus_tag=AC00_RS13055;product=two-component system response regulator BtsR;protein_id=WP_000598641.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 2628 4313 . - . ID=gene-AC00_RS13050;Name=btsS;gbkey=Gene;gene=btsS;gene_biotype=protein_coding;locus_tag=AC00_RS13050;old_locus_tag=AC00_2404 NZ_JJLU01000083.1 Protein Homology CDS 2628 4313 . - 0 ID=cds-WP_032288231.1;Parent=gene-AC00_RS13050;Dbxref=GenBank:WP_032288231.1;Name=WP_032288231.1;gbkey=CDS;gene=btsS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416630.1;locus_tag=AC00_RS13050;product=two-component regulatory system sensor histidine kinase BtsS;protein_id=WP_032288231.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 4535 5266 . + . ID=gene-AC00_RS13045;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=AC00_RS13045;old_locus_tag=AC00_2406 NZ_JJLU01000083.1 Protein Homology CDS 4535 5266 . + 0 ID=cds-WP_032281199.1;Parent=gene-AC00_RS13045;Dbxref=GenBank:WP_032281199.1;Name=WP_032281199.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416631.1;locus_tag=AC00_RS13045;product=HTH-type transcriptional regulator MlrA;protein_id=WP_032281199.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 5326 5433 . + . ID=gene-AC00_RS0124960;Name=yohO;gbkey=Gene;gene=yohO;gene_biotype=protein_coding;locus_tag=AC00_RS0124960 NZ_JJLU01000083.1 Protein Homology CDS 5326 5433 . + 0 ID=cds-WP_001216963.1;Parent=gene-AC00_RS0124960;Dbxref=GenBank:WP_001216963.1;Name=WP_001216963.1;gbkey=CDS;gene=yohO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588460.1;locus_tag=AC00_RS0124960;product=protein YohO;protein_id=WP_001216963.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 5414 6145 . - . ID=gene-AC00_RS13040;Name=yehW;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=AC00_RS13040;old_locus_tag=AC00_2407 NZ_JJLU01000083.1 Protein Homology CDS 5414 6145 . - 0 ID=cds-WP_032281200.1;Parent=gene-AC00_RS13040;Dbxref=GenBank:WP_032281200.1;Name=WP_032281200.1;gbkey=CDS;gene=yehW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311042.1;locus_tag=AC00_RS13040;product=glycine betaine ABC transporter permease YehW;protein_id=WP_032281200.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 6150 7076 . - . ID=gene-AC00_RS13035;Name=yehX;gbkey=Gene;gene=yehX;gene_biotype=protein_coding;locus_tag=AC00_RS13035;old_locus_tag=AC00_2408 NZ_JJLU01000083.1 Protein Homology CDS 6150 7076 . - 0 ID=cds-WP_032281201.1;Parent=gene-AC00_RS13035;Dbxref=GenBank:WP_032281201.1;Name=WP_032281201.1;gbkey=CDS;gene=yehX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311043.1;locus_tag=AC00_RS13035;product=glycine betaine ABC transporter ATP binding protein YehX;protein_id=WP_032281201.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 7069 8226 . - . ID=gene-AC00_RS13030;Name=yehY;gbkey=Gene;gene=yehY;gene_biotype=protein_coding;locus_tag=AC00_RS13030;old_locus_tag=AC00_2409 NZ_JJLU01000083.1 Protein Homology CDS 7069 8226 . - 0 ID=cds-WP_032281202.1;Parent=gene-AC00_RS13030;Dbxref=GenBank:WP_032281202.1;Name=WP_032281202.1;gbkey=CDS;gene=yehY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311044.1;locus_tag=AC00_RS13030;product=glycine betaine ABC transporter permease YehY;protein_id=WP_032281202.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 8233 9150 . - . ID=gene-AC00_RS13025;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=AC00_RS13025;old_locus_tag=AC00_2410 NZ_JJLU01000083.1 Protein Homology CDS 8233 9150 . - 0 ID=cds-WP_032281203.1;Parent=gene-AC00_RS13025;Dbxref=GenBank:WP_032281203.1;Name=WP_032281203.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311045.1;locus_tag=AC00_RS13025;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_032281203.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 9402 11699 . - . ID=gene-AC00_RS13020;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=AC00_RS13020;old_locus_tag=AC00_2411 NZ_JJLU01000083.1 Protein Homology CDS 9402 11699 . - 0 ID=cds-WP_032281204.1;Parent=gene-AC00_RS13020;Dbxref=GenBank:WP_032281204.1;Name=WP_032281204.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=AC00_RS13020;product=beta-glucosidase BglX;protein_id=WP_032281204.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 11895 13610 . + . ID=gene-AC00_RS13015;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=AC00_RS13015;old_locus_tag=AC00_2412 NZ_JJLU01000083.1 Protein Homology CDS 11895 13610 . + 0 ID=cds-WP_032288232.1;Parent=gene-AC00_RS13015;Dbxref=GenBank:WP_032288232.1;Name=WP_032288232.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AC00_RS13015;product=D-lactate dehydrogenase;protein_id=WP_032288232.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 13649 14581 . - . ID=gene-AC00_RS13010;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=AC00_RS13010;old_locus_tag=AC00_2413 NZ_JJLU01000083.1 Protein Homology CDS 13649 14581 . - 0 ID=cds-WP_032288233.1;Parent=gene-AC00_RS13010;Dbxref=GenBank:WP_032288233.1;Name=WP_032288233.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416638.4;locus_tag=AC00_RS13010;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_032288233.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 14755 15342 . - . ID=gene-AC00_RS13005;Name=yohC;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=AC00_RS13005;old_locus_tag=AC00_2414 NZ_JJLU01000083.1 Protein Homology CDS 14755 15342 . - 0 ID=cds-WP_001295454.1;Parent=gene-AC00_RS13005;Dbxref=GenBank:WP_001295454.1;Name=WP_001295454.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;gene=yohC;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=AC00_RS13005;product=Yip1 family protein;protein_id=WP_001295454.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 15512 16090 . + . ID=gene-AC00_RS13000;Name=yohD;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=AC00_RS13000;old_locus_tag=AC00_2415 NZ_JJLU01000083.1 Protein Homology CDS 15512 16090 . + 0 ID=cds-WP_000365433.1;Parent=gene-AC00_RS13000;Dbxref=GenBank:WP_000365433.1;Name=WP_000365433.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yohD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416640.2;locus_tag=AC00_RS13000;product=DedA family protein;protein_id=WP_000365433.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 16220 16981 . - . ID=gene-AC00_RS12995;Name=yohF;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=AC00_RS12995;old_locus_tag=AC00_2417 NZ_JJLU01000083.1 Protein Homology CDS 16220 16981 . - 0 ID=cds-WP_000079520.1;Parent=gene-AC00_RS12995;Dbxref=GenBank:WP_000079520.1;Name=WP_000079520.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yohF;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311051.1;locus_tag=AC00_RS12995;product=SDR family oxidoreductase;protein_id=WP_000079520.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 17034 18470 . - . ID=gene-AC00_RS12990;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=AC00_RS12990;old_locus_tag=AC00_2418 NZ_JJLU01000083.1 Protein Homology CDS 17034 18470 . - 0 ID=cds-WP_001078171.1;Parent=gene-AC00_RS12990;Dbxref=GenBank:WP_001078171.1;Name=WP_001078171.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001583680.1;locus_tag=AC00_RS12990;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_001078171.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 18694 18777 . + . ID=gene-AC00_RS0124965;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=AC00_RS0124965 NZ_JJLU01000083.1 Protein Homology CDS 18694 18777 . + 0 ID=cds-WP_000691708.1;Parent=gene-AC00_RS0124965;Dbxref=GenBank:WP_000691708.1;Name=WP_000691708.1;gbkey=CDS;gene=yohP;inference=COORDINATES: protein motif:HMM:NF011345.0;locus_tag=AC00_RS0124965;product=small membrane protein YohP;protein_id=WP_000691708.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 19165 20115 . - . ID=gene-AC00_RS12985;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=AC00_RS12985;old_locus_tag=AC00_2419 NZ_JJLU01000083.1 Protein Homology CDS 19165 20115 . - 0 ID=cds-WP_032281263.1;Parent=gene-AC00_RS12985;Dbxref=GenBank:WP_032281263.1;Name=WP_032281263.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311053.1;locus_tag=AC00_RS12985;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_032281263.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 20354 20752 . + . ID=gene-AC00_RS12980;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=AC00_RS12980;old_locus_tag=AC00_2420 NZ_JJLU01000083.1 Protein Homology CDS 20354 20752 . + 0 ID=cds-WP_001299855.1;Parent=gene-AC00_RS12980;Dbxref=GenBank:WP_001299855.1;Name=WP_001299855.1;gbkey=CDS;gene=yohJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311060.1;locus_tag=AC00_RS12980;product=CidA/LrgA family protein;protein_id=WP_001299855.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 20749 21444 . + . ID=gene-AC00_RS12975;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=AC00_RS12975;old_locus_tag=AC00_2421 NZ_JJLU01000083.1 Protein Homology CDS 20749 21444 . + 0 ID=cds-WP_032281206.1;Parent=gene-AC00_RS12975;Dbxref=GenBank:WP_032281206.1;Name=WP_032281206.1;gbkey=CDS;gene=yohK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=AC00_RS12975;product=CidB/LrgB family autolysis modulator;protein_id=WP_032281206.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 21574 22458 . + . ID=gene-AC00_RS12970;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=AC00_RS12970;old_locus_tag=AC00_2422 NZ_JJLU01000083.1 Protein Homology CDS 21574 22458 . + 0 ID=cds-WP_000553555.1;Parent=gene-AC00_RS12970;Dbxref=GenBank:WP_000553555.1;Name=WP_000553555.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=AC00_RS12970;product=cytidine deaminase;protein_id=WP_000553555.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 22608 23327 . + . ID=gene-AC00_RS12965;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=AC00_RS12965;old_locus_tag=AC00_2423 NZ_JJLU01000083.1 Protein Homology CDS 22608 23327 . + 0 ID=cds-WP_000920064.1;Parent=gene-AC00_RS12965;Dbxref=GenBank:WP_000920064.1;Name=WP_000920064.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311063.1;locus_tag=AC00_RS12965;product=outer membrane permeability protein SanA;protein_id=WP_000920064.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 23330 23569 . + . ID=gene-AC00_RS12960;Name=yeiS;gbkey=Gene;gene=yeiS;gene_biotype=protein_coding;locus_tag=AC00_RS12960;old_locus_tag=AC00_2424 NZ_JJLU01000083.1 Protein Homology CDS 23330 23569 . + 0 ID=cds-WP_000383096.1;Parent=gene-AC00_RS12960;Dbxref=GenBank:WP_000383096.1;Name=WP_000383096.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yeiS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311064.1;locus_tag=AC00_RS12960;product=DUF2542 family protein;protein_id=WP_000383096.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 23763 25001 . + . ID=gene-AC00_RS12955;Name=preT;gbkey=Gene;gene=preT;gene_biotype=protein_coding;locus_tag=AC00_RS12955;old_locus_tag=AC00_2425 NZ_JJLU01000083.1 Protein Homology CDS 23763 25001 . + 0 ID=cds-WP_032281207.1;Parent=gene-AC00_RS12955;Dbxref=GenBank:WP_032281207.1;Name=WP_032281207.1;gbkey=CDS;gene=preT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708046.1;locus_tag=AC00_RS12955;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;protein_id=WP_032281207.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 24995 26230 . + . ID=gene-AC00_RS12950;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=AC00_RS12950;old_locus_tag=AC00_2426 NZ_JJLU01000083.1 Protein Homology CDS 24995 26230 . + 0 ID=cds-WP_032281208.1;Parent=gene-AC00_RS12950;Dbxref=GenBank:WP_032281208.1;Name=WP_032281208.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416652.4;locus_tag=AC00_RS12950;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_032281208.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 26301 27311 . - . ID=gene-AC00_RS12945;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AC00_RS12945;old_locus_tag=AC00_2427 NZ_JJLU01000083.1 Protein Homology CDS 26301 27311 . - 0 ID=cds-WP_032281209.1;Parent=gene-AC00_RS12945;Dbxref=GenBank:WP_032281209.1;Name=WP_032281209.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=AC00_RS12945;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_032281209.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 27327 28847 . - . ID=gene-AC00_RS12940;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AC00_RS12940;old_locus_tag=AC00_2428 NZ_JJLU01000083.1 Protein Homology CDS 27327 28847 . - 0 ID=cds-WP_000255032.1;Parent=gene-AC00_RS12940;Dbxref=GenBank:WP_000255032.1;Name=WP_000255032.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=AC00_RS12940;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_000255032.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 28908 29906 . - . ID=gene-AC00_RS12935;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AC00_RS12935;old_locus_tag=AC00_2429 NZ_JJLU01000083.1 Protein Homology CDS 28908 29906 . - 0 ID=cds-WP_032281210.1;Parent=gene-AC00_RS12935;Dbxref=GenBank:WP_032281210.1;Name=WP_032281210.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=AC00_RS12935;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_032281210.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 30186 31226 . - . ID=gene-AC00_RS12930;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=AC00_RS12930;old_locus_tag=AC00_2430 NZ_JJLU01000083.1 Protein Homology CDS 30186 31226 . - 0 ID=cds-WP_000628659.1;Parent=gene-AC00_RS12930;Dbxref=GenBank:WP_000628659.1;Name=WP_000628659.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708050.2;locus_tag=AC00_RS12930;product=HTH-type transcriptional regulator GalS;protein_id=WP_000628659.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 31368 32525 . - . ID=gene-AC00_RS12925;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=AC00_RS12925;old_locus_tag=AC00_2431 NZ_JJLU01000083.1 Protein Homology CDS 31368 32525 . - 0 ID=cds-WP_032288234.1;Parent=gene-AC00_RS12925;Dbxref=GenBank:WP_032288234.1;Name=WP_032288234.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416657.1;locus_tag=AC00_RS12925;product=DUF418 domain-containing protein YeiB;protein_id=WP_032288234.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 32542 33210 . - . ID=gene-AC00_RS12920;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AC00_RS12920;old_locus_tag=AC00_2432 NZ_JJLU01000083.1 Protein Homology CDS 32542 33210 . - 0 ID=cds-WP_001139613.1;Parent=gene-AC00_RS12920;Dbxref=GenBank:WP_001139613.1;Name=WP_001139613.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=AC00_RS12920;product=GTP cyclohydrolase I FolE;protein_id=WP_001139613.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 33468 34304 . + . ID=gene-AC00_RS12915;Name=yeiG;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=AC00_RS12915;old_locus_tag=AC00_2433 NZ_JJLU01000083.1 Protein Homology CDS 33468 34304 . + 0 ID=cds-WP_000425434.1;Parent=gene-AC00_RS12915;Dbxref=GenBank:WP_000425434.1;Name=WP_000425434.1;gbkey=CDS;gene=yeiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311073.1;locus_tag=AC00_RS12915;product=S-formylglutathione hydrolase;protein_id=WP_000425434.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 34336 36315 . - . ID=gene-AC00_RS12910;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=AC00_RS12910;old_locus_tag=AC00_2434 NZ_JJLU01000083.1 Protein Homology CDS 34336 36315 . - 0 ID=cds-WP_032281214.1;Parent=gene-AC00_RS12910;Dbxref=GenBank:WP_032281214.1;Name=WP_032281214.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311074.1;locus_tag=AC00_RS12910;product=catecholate siderophore receptor CirA;protein_id=WP_032281214.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 36607 38076 . - . ID=gene-AC00_RS12905;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=AC00_RS12905;old_locus_tag=AC00_2435 NZ_JJLU01000083.1 Protein Homology CDS 36607 38076 . - 0 ID=cds-WP_032281216.1;Parent=gene-AC00_RS12905;Dbxref=GenBank:WP_032281216.1;Name=WP_032281216.1;gbkey=CDS;gene=lysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416661.1;locus_tag=AC00_RS12905;product=lysine-specific permease;protein_id=WP_032281216.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 38281 39162 . - . ID=gene-AC00_RS12900;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AC00_RS12900;old_locus_tag=AC00_2437 NZ_JJLU01000083.1 Protein Homology CDS 38281 39162 . - 0 ID=cds-WP_000548294.1;Parent=gene-AC00_RS12900;Dbxref=GenBank:WP_000548294.1;Name=WP_000548294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311076.1;locus_tag=AC00_RS12900;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_000548294.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 39261 40310 . + . ID=gene-AC00_RS12895;Name=yeiH;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=AC00_RS12895;old_locus_tag=AC00_2438 NZ_JJLU01000083.1 Protein Homology CDS 39261 40310 . + 0 ID=cds-WP_000182053.1;Parent=gene-AC00_RS12895;Dbxref=GenBank:WP_000182053.1;Name=WP_000182053.1;gbkey=CDS;gene=yeiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311077.1;locus_tag=AC00_RS12895;product=YeiH family protein;protein_id=WP_000182053.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 40384 41241 . + . ID=gene-AC00_RS12890;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=AC00_RS12890;old_locus_tag=AC00_2439 NZ_JJLU01000083.1 Protein Homology CDS 40384 41241 . + 0 ID=cds-WP_000873894.1;Parent=gene-AC00_RS12890;Dbxref=GenBank:WP_000873894.1;Name=WP_000873894.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=AC00_RS12890;product=deoxyribonuclease IV;protein_id=WP_000873894.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 41244 42332 . + . ID=gene-AC00_RS12885;Name=yeiI;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=AC00_RS12885;old_locus_tag=AC00_2440 NZ_JJLU01000083.1 Protein Homology CDS 41244 42332 . + 0 ID=cds-WP_032281217.1;Parent=gene-AC00_RS12885;Dbxref=GenBank:WP_032281217.1;Name=WP_032281217.1;gbkey=CDS;gene=yeiI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311079.1;locus_tag=AC00_RS12885;product=sugar kinase;protein_id=WP_032281217.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 42388 43638 . - . ID=gene-AC00_RS12880;Name=nupX;gbkey=Gene;gene=nupX;gene_biotype=protein_coding;locus_tag=AC00_RS12880;old_locus_tag=AC00_2441 NZ_JJLU01000083.1 Protein Homology CDS 42388 43638 . - 0 ID=cds-WP_000382973.1;Parent=gene-AC00_RS12880;Dbxref=GenBank:WP_000382973.1;Name=WP_000382973.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=nupX;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416666.1;locus_tag=AC00_RS12880;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000382973.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 43738 44679 . - . ID=gene-AC00_RS12875;Name=rihB;gbkey=Gene;gene=rihB;gene_biotype=protein_coding;locus_tag=AC00_RS12875;old_locus_tag=AC00_2442 NZ_JJLU01000083.1 Protein Homology CDS 43738 44679 . - 0 ID=cds-WP_032281218.1;Parent=gene-AC00_RS12875;Dbxref=GenBank:WP_032281218.1;Name=WP_032281218.1;gbkey=CDS;gene=rihB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416667.1;locus_tag=AC00_RS12875;product=ribosylpyrimidine nucleosidase;protein_id=WP_032281218.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 44809 45507 . + . ID=gene-AC00_RS12870;Name=yeiL;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=AC00_RS12870;old_locus_tag=AC00_2443 NZ_JJLU01000083.1 Protein Homology CDS 44809 45507 . + 0 ID=cds-WP_032281219.1;Parent=gene-AC00_RS12870;Dbxref=GenBank:WP_032281219.1;Name=WP_032281219.1;gbkey=CDS;gene=yeiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311082.4;locus_tag=AC00_RS12870;product=transcriptional regulator YeiL;protein_id=WP_032281219.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 45575 46825 . - . ID=gene-AC00_RS12865;Name=psuT;gbkey=Gene;gene=psuT;gene_biotype=protein_coding;locus_tag=AC00_RS12865;old_locus_tag=AC00_2444 NZ_JJLU01000083.1 Protein Homology CDS 45575 46825 . - 0 ID=cds-WP_000353878.1;Parent=gene-AC00_RS12865;Dbxref=GenBank:WP_000353878.1;Name=WP_000353878.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;gene=psuT;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416669.1;locus_tag=AC00_RS12865;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_000353878.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 46919 47857 . - . ID=gene-AC00_RS12860;Name=psuG;gbkey=Gene;gene=psuG;gene_biotype=protein_coding;locus_tag=AC00_RS12860;old_locus_tag=AC00_2445 NZ_JJLU01000083.1 Protein Homology CDS 46919 47857 . - 0 ID=cds-WP_001292454.1;Parent=gene-AC00_RS12860;Dbxref=GenBank:WP_001292454.1;Name=WP_001292454.1;gbkey=CDS;gene=psuG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311084.1;locus_tag=AC00_RS12860;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_001292454.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 47845 48786 . - . ID=gene-AC00_RS12855;Name=psuK;gbkey=Gene;gene=psuK;gene_biotype=protein_coding;locus_tag=AC00_RS12855;old_locus_tag=AC00_2446 NZ_JJLU01000083.1 Protein Homology CDS 47845 48786 . - 0 ID=cds-WP_032281220.1;Parent=gene-AC00_RS12855;Dbxref=GenBank:WP_032281220.1;Name=WP_032281220.1;gbkey=CDS;gene=psuK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416671.1;locus_tag=AC00_RS12855;product=pseudouridine kinase;protein_id=WP_032281220.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 49210 50901 . - . ID=gene-AC00_RS12850;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=AC00_RS12850;old_locus_tag=AC00_2447 NZ_JJLU01000083.1 Protein Homology CDS 49210 50901 . - 0 ID=cds-WP_000854439.1;Parent=gene-AC00_RS12850;Dbxref=GenBank:WP_000854439.1;Name=WP_000854439.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311086.1;locus_tag=AC00_RS12850;product=PTS fructose transporter subunit IIBC;protein_id=WP_000854439.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 50918 51856 . - . ID=gene-AC00_RS12845;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AC00_RS12845;old_locus_tag=AC00_2448 NZ_JJLU01000083.1 Protein Homology CDS 50918 51856 . - 0 ID=cds-WP_000091263.1;Parent=gene-AC00_RS12845;Dbxref=GenBank:WP_000091263.1;Name=WP_000091263.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311087.1;locus_tag=AC00_RS12845;product=1-phosphofructokinase;protein_id=WP_000091263.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 51856 52986 . - . ID=gene-AC00_RS12840;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=AC00_RS12840;old_locus_tag=AC00_2449 NZ_JJLU01000083.1 Protein Homology CDS 51856 52986 . - 0 ID=cds-WP_000487240.1;Parent=gene-AC00_RS12840;Dbxref=GenBank:WP_000487240.1;Name=WP_000487240.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311088.1;locus_tag=AC00_RS12840;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_000487240.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 53354 54535 . + . ID=gene-AC00_RS12835;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=AC00_RS12835;old_locus_tag=AC00_2451 NZ_JJLU01000083.1 Protein Homology CDS 53354 54535 . + 0 ID=cds-WP_032281222.1;Parent=gene-AC00_RS12835;Dbxref=GenBank:WP_032281222.1;Name=WP_032281222.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311089.1;locus_tag=AC00_RS12835;product=sugar efflux transporter SetB;protein_id=WP_032281222.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 54532 54786 . - . ID=gene-AC00_RS0124985;Name=yeiW;gbkey=Gene;gene=yeiW;gene_biotype=protein_coding;locus_tag=AC00_RS0124985;old_locus_tag=AC00_2452 NZ_JJLU01000083.1 Protein Homology CDS 54532 54786 . - 0 ID=cds-WP_000389030.1;Parent=gene-AC00_RS0124985;Dbxref=GenBank:WP_000389030.1;Name=WP_000389030.1;Ontology_term=GO:0051536;gbkey=CDS;gene=yeiW;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588461.1;locus_tag=AC00_RS0124985;product=YkgJ family cysteine cluster protein;protein_id=WP_000389030.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 54941 55513 . + . ID=gene-AC00_RS12830;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=AC00_RS12830;old_locus_tag=AC00_2454 NZ_JJLU01000083.1 Protein Homology CDS 54941 55513 . + 0 ID=cds-WP_001136827.1;Parent=gene-AC00_RS12830;Dbxref=GenBank:WP_001136827.1;Name=WP_001136827.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=AC00_RS12830;product=elongation factor P-like protein YeiP;protein_id=WP_001136827.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 55736 57202 . + . ID=gene-AC00_RS12825;Name=yeiQ;gbkey=Gene;gene=yeiQ;gene_biotype=protein_coding;locus_tag=AC00_RS12825;old_locus_tag=AC00_2455 NZ_JJLU01000083.1 Protein Homology CDS 55736 57202 . + 0 ID=cds-WP_032281224.1;Parent=gene-AC00_RS12825;Dbxref=GenBank:WP_032281224.1;Name=WP_032281224.1;Ontology_term=GO:0016616;gbkey=CDS;gene=yeiQ;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416677.1;locus_tag=AC00_RS12825;product=mannitol dehydrogenase family protein;protein_id=WP_032281224.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 57320 58306 . + . ID=gene-AC00_RS12820;Name=yeiR;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=AC00_RS12820;old_locus_tag=AC00_2456 NZ_JJLU01000083.1 Protein Homology CDS 57320 58306 . + 0 ID=cds-WP_000198819.1;Parent=gene-AC00_RS12820;Dbxref=GenBank:WP_000198819.1;Name=WP_000198819.1;gbkey=CDS;gene=yeiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708072.1;locus_tag=AC00_RS12820;product=zinc-binding GTPase YeiR;protein_id=WP_000198819.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 58345 59058 . + . ID=gene-AC00_RS12815;Name=lpxT;gbkey=Gene;gene=lpxT;gene_biotype=protein_coding;locus_tag=AC00_RS12815;old_locus_tag=AC00_2457 NZ_JJLU01000083.1 Protein Homology CDS 58345 59058 . + 0 ID=cds-WP_000594599.1;Parent=gene-AC00_RS12815;Dbxref=GenBank:WP_000594599.1;Name=WP_000594599.1;gbkey=CDS;gene=lpxT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311093.2;locus_tag=AC00_RS12815;product=Kdo(2)-lipid A phosphotransferase;protein_id=WP_000594599.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 59470 60036 . + . ID=gene-AC00_RS0124990;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=AC00_RS0124990;old_locus_tag=AC00_2458 NZ_JJLU01000083.1 Protein Homology CDS 59470 60036 . + 0 ID=cds-WP_000241011.1;Parent=gene-AC00_RS0124990;Dbxref=GenBank:WP_000241011.1;Name=WP_000241011.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=AC00_RS0124990;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_000241011.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 60217 61773 . + . ID=gene-AC00_RS12810;Name=pdeN;gbkey=Gene;gene=pdeN;gene_biotype=protein_coding;locus_tag=AC00_RS12810;old_locus_tag=AC00_2459 NZ_JJLU01000083.1 Protein Homology CDS 60217 61773 . + 0 ID=cds-WP_000470594.1;Parent=gene-AC00_RS12810;Dbxref=GenBank:WP_000470594.1;Name=WP_000470594.1;gbkey=CDS;gene=pdeN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416681.1;locus_tag=AC00_RS12810;product=cyclic di-GMP phosphodiesterase;protein_id=WP_000470594.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 61855 63669 . + . ID=gene-AC00_RS12805;Name=yejA;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=AC00_RS12805;old_locus_tag=AC00_2460 NZ_JJLU01000083.1 Protein Homology CDS 61855 63669 . + 0 ID=cds-WP_032281226.1;Parent=gene-AC00_RS12805;Dbxref=GenBank:WP_032281226.1;Name=WP_032281226.1;gbkey=CDS;gene=yejA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311096.2;locus_tag=AC00_RS12805;product=extracellular solute-binding protein;protein_id=WP_032281226.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 63670 64764 . + . ID=gene-AC00_RS12800;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=AC00_RS12800;old_locus_tag=AC00_2461 NZ_JJLU01000083.1 Protein Homology CDS 63670 64764 . + 0 ID=cds-WP_000501604.1;Parent=gene-AC00_RS12800;Dbxref=GenBank:WP_000501604.1;Name=WP_000501604.1;gbkey=CDS;gene=yejB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=AC00_RS12800;product=microcin C ABC transporter permease YejB;protein_id=WP_000501604.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 64764 65789 . + . ID=gene-AC00_RS12795;Name=yejE;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=AC00_RS12795;old_locus_tag=AC00_2462 NZ_JJLU01000083.1 Protein Homology CDS 64764 65789 . + 0 ID=cds-WP_000088916.1;Parent=gene-AC00_RS12795;Dbxref=GenBank:WP_000088916.1;Name=WP_000088916.1;gbkey=CDS;gene=yejE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708078.1;locus_tag=AC00_RS12795;product=ABC transporter permease;protein_id=WP_000088916.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 65791 67380 . + . ID=gene-AC00_RS12790;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=AC00_RS12790;old_locus_tag=AC00_2463 NZ_JJLU01000083.1 Protein Homology CDS 65791 67380 . + 0 ID=cds-WP_032281227.1;Parent=gene-AC00_RS12790;Dbxref=GenBank:WP_032281227.1;Name=WP_032281227.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311099.1;locus_tag=AC00_RS12790;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_032281227.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 67384 67728 . - . ID=gene-AC00_RS12785;Name=yejG;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=AC00_RS12785;old_locus_tag=AC00_2464 NZ_JJLU01000083.1 Protein Homology CDS 67384 67728 . - 0 ID=cds-WP_032281228.1;Parent=gene-AC00_RS12785;Dbxref=GenBank:WP_032281228.1;Name=WP_032281228.1;gbkey=CDS;gene=yejG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416686.1;locus_tag=AC00_RS12785;product=YejG family protein;protein_id=WP_032281228.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 68062 69252 . - . ID=gene-AC00_RS12780;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=AC00_RS12780;old_locus_tag=AC00_2465 NZ_JJLU01000083.1 Protein Homology CDS 68062 69252 . - 0 ID=cds-WP_000213385.1;Parent=gene-AC00_RS12780;Dbxref=GenBank:WP_000213385.1;Name=WP_000213385.1;gbkey=CDS;gene=bcr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311101.1;locus_tag=AC00_RS12780;product=multidrug efflux MFS transporter Bcr;protein_id=WP_000213385.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 69280 69975 . - . ID=gene-AC00_RS12775;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=AC00_RS12775;old_locus_tag=AC00_2466 NZ_JJLU01000083.1 Protein Homology CDS 69280 69975 . - 0 ID=cds-WP_001234850.1;Parent=gene-AC00_RS12775;Dbxref=GenBank:WP_001234850.1;Name=WP_001234850.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311102.1;locus_tag=AC00_RS12775;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_001234850.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 70124 71884 . + . ID=gene-AC00_RS12770;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;locus_tag=AC00_RS12770;old_locus_tag=AC00_2467 NZ_JJLU01000083.1 Protein Homology CDS 70124 71884 . + 0 ID=cds-WP_000578056.1;Parent=gene-AC00_RS12770;Dbxref=GenBank:WP_000578056.1;Name=WP_000578056.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;gene=radD;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311103.1;locus_tag=AC00_RS12770;product=DEAD/DEAH box helicase;protein_id=WP_000578056.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 72009 72293 . + . ID=gene-AC00_RS12765;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AC00_RS12765;old_locus_tag=AC00_2468 NZ_JJLU01000083.1 Protein Homology CDS 72009 72293 . + 0 ID=cds-WP_000494183.1;Parent=gene-AC00_RS12765;Dbxref=GenBank:WP_000494183.1;Name=WP_000494183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=AC00_RS12765;product=50S ribosomal protein L25;protein_id=WP_000494183.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 72432 73439 . - . ID=gene-AC00_RS12760;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=AC00_RS12760;old_locus_tag=AC00_2469 NZ_JJLU01000083.1 Protein Homology CDS 72432 73439 . - 0 ID=cds-WP_000050789.1;Parent=gene-AC00_RS12760;Dbxref=GenBank:WP_000050789.1;Name=WP_000050789.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311105.1;locus_tag=AC00_RS12760;product=nucleoid-associated protein YejK;protein_id=WP_000050789.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 73621 73848 . + . ID=gene-AC00_RS12755;Name=yejL;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=AC00_RS12755;old_locus_tag=AC00_2471 NZ_JJLU01000083.1 Protein Homology CDS 73621 73848 . + 0 ID=cds-WP_001135667.1;Parent=gene-AC00_RS12755;Dbxref=GenBank:WP_001135667.1;Name=WP_001135667.1;gbkey=CDS;gene=yejL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=AC00_RS12755;product=YejL family protein;protein_id=WP_001135667.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 73868 75628 . + . ID=gene-AC00_RS12750;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=AC00_RS12750;old_locus_tag=AC00_2472 NZ_JJLU01000083.1 Protein Homology CDS 73868 75628 . + 0 ID=cds-WP_032281229.1;Parent=gene-AC00_RS12750;Dbxref=GenBank:WP_032281229.1;Name=WP_032281229.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311107.1;locus_tag=AC00_RS12750;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_032281229.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 75703 75779 . + . ID=gene-AC00_RS12745;Name=AC00_RS12745;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS12745;old_locus_tag=AC00_2473 NZ_JJLU01000083.1 tRNAscan-SE tRNA 75703 75779 . + . ID=rna-AC00_RS12745;Parent=gene-AC00_RS12745;anticodon=(pos:75737..75739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS12745;product=tRNA-Pro NZ_JJLU01000083.1 tRNAscan-SE exon 75703 75779 . + . ID=exon-AC00_RS12745-1;Parent=rna-AC00_RS12745;anticodon=(pos:75737..75739);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS12745;product=tRNA-Pro NZ_JJLU01000083.1 RefSeq gene 75881 78472 . - . ID=gene-AC00_RS12740;Name=yejO;gbkey=Gene;gene=yejO;gene_biotype=protein_coding;locus_tag=AC00_RS12740;old_locus_tag=AC00_2474 NZ_JJLU01000083.1 Protein Homology CDS 75881 78472 . - 0 ID=cds-WP_050438650.1;Parent=gene-AC00_RS12740;Dbxref=GenBank:WP_050438650.1;Name=WP_050438650.1;gbkey=CDS;gene=yejO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311108.2;locus_tag=AC00_RS12740;product=autotransporter YejO;protein_id=WP_050438650.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 78792 79439 . + . ID=gene-AC00_RS12735;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=AC00_RS12735;old_locus_tag=AC00_2475 NZ_JJLU01000083.1 Protein Homology CDS 78792 79439 . + 0 ID=cds-WP_001301754.1;Parent=gene-AC00_RS12735;Dbxref=GenBank:WP_001301754.1;Name=WP_001301754.1;gbkey=CDS;gene=narP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311109.1;locus_tag=AC00_RS12735;product=nitrate/nitrite response regulator protein NarP;protein_id=WP_001301754.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 79474 80526 . - . ID=gene-AC00_RS12730;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=AC00_RS12730;old_locus_tag=AC00_2476 NZ_JJLU01000083.1 Protein Homology CDS 79474 80526 . - 0 ID=cds-WP_001211575.1;Parent=gene-AC00_RS12730;Dbxref=GenBank:WP_001211575.1;Name=WP_001211575.1;gbkey=CDS;gene=ccmH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416698.1;locus_tag=AC00_RS12730;product=cytochrome c-type biogenesis thiol:disulfide oxidoreductase CcmH;protein_id=WP_001211575.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 80523 81080 . - . ID=gene-AC00_RS12725;Name=dsbE;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=AC00_RS12725;old_locus_tag=AC00_2477 NZ_JJLU01000083.1 Protein Homology CDS 80523 81080 . - 0 ID=cds-WP_000824439.1;Parent=gene-AC00_RS12725;Dbxref=GenBank:WP_000824439.1;Name=WP_000824439.1;gbkey=CDS;gene=dsbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311111.1;locus_tag=AC00_RS12725;product=thiol:disulfide interchange protein DsbE;protein_id=WP_000824439.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 81077 83020 . - . ID=gene-AC00_RS12720;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=AC00_RS12720;old_locus_tag=AC00_2478 NZ_JJLU01000083.1 Protein Homology CDS 81077 83020 . - 0 ID=cds-WP_032281231.1;Parent=gene-AC00_RS12720;Dbxref=GenBank:WP_032281231.1;Name=WP_032281231.1;gbkey=CDS;gene=ccmF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311112.1;locus_tag=AC00_RS12720;product=cytochrome c-type biogenesis heme lyase CcmF;protein_id=WP_032281231.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 83017 83496 . - . ID=gene-AC00_RS12715;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=AC00_RS12715;old_locus_tag=AC00_2479 NZ_JJLU01000083.1 Protein Homology CDS 83017 83496 . - 0 ID=cds-WP_001026418.1;Parent=gene-AC00_RS12715;Dbxref=GenBank:WP_001026418.1;Name=WP_001026418.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311113.1;locus_tag=AC00_RS12715;product=cytochrome c maturation protein CcmE;protein_id=WP_001026418.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 83493 83702 . - . ID=gene-AC00_RS12710;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=AC00_RS12710;old_locus_tag=AC00_2480 NZ_JJLU01000083.1 Protein Homology CDS 83493 83702 . - 0 ID=cds-WP_032224485.1;Parent=gene-AC00_RS12710;Dbxref=GenBank:WP_032224485.1;Name=WP_032224485.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311114.1;locus_tag=AC00_RS12710;product=heme exporter protein CcmD;protein_id=WP_032224485.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 83699 84436 . - . ID=gene-AC00_RS12705;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=AC00_RS12705;old_locus_tag=AC00_2481 NZ_JJLU01000083.1 Protein Homology CDS 83699 84436 . - 0 ID=cds-WP_001295447.1;Parent=gene-AC00_RS12705;Dbxref=GenBank:WP_001295447.1;Name=WP_001295447.1;gbkey=CDS;gene=ccmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311115.1;locus_tag=AC00_RS12705;product=heme exporter protein CcmC;protein_id=WP_001295447.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 84478 85140 . - . ID=gene-AC00_RS12700;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=AC00_RS12700;old_locus_tag=AC00_2482 NZ_JJLU01000083.1 Protein Homology CDS 84478 85140 . - 0 ID=cds-WP_077757399.1;Parent=gene-AC00_RS12700;Dbxref=GenBank:WP_077757399.1;Name=WP_077757399.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311116.1;locus_tag=AC00_RS12700;product=heme exporter protein CcmB;protein_id=WP_077757399.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 85137 85760 . - . ID=gene-AC00_RS12695;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=AC00_RS12695;old_locus_tag=AC00_2483 NZ_JJLU01000083.1 Protein Homology CDS 85137 85760 . - 0 ID=cds-WP_077757400.1;Parent=gene-AC00_RS12695;Dbxref=GenBank:WP_077757400.1;Name=WP_077757400.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416705.2;locus_tag=AC00_RS12695;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_077757400.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 85773 86375 . - . ID=gene-AC00_RS12690;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=AC00_RS12690;old_locus_tag=AC00_2484 NZ_JJLU01000083.1 Protein Homology CDS 85773 86375 . - 0 ID=cds-WP_000528376.1;Parent=gene-AC00_RS12690;Dbxref=GenBank:WP_000528376.1;Name=WP_000528376.1;gbkey=CDS;gene=napC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311118.1;locus_tag=AC00_RS12690;product=cytochrome c-type protein NapC;protein_id=WP_000528376.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 86385 86834 . - . ID=gene-AC00_RS12685;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=AC00_RS12685;old_locus_tag=AC00_2485 NZ_JJLU01000083.1 Protein Homology CDS 86385 86834 . - 0 ID=cds-WP_000835174.1;Parent=gene-AC00_RS12685;Dbxref=GenBank:WP_000835174.1;Name=WP_000835174.1;gbkey=CDS;gene=napB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311119.2;locus_tag=AC00_RS12685;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_000835174.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 86831 87694 . - . ID=gene-AC00_RS12680;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AC00_RS12680;old_locus_tag=AC00_2486 NZ_JJLU01000083.1 Protein Homology CDS 86831 87694 . - 0 ID=cds-WP_000013513.1;Parent=gene-AC00_RS12680;Dbxref=GenBank:WP_000013513.1;Name=WP_000013513.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311120.1;locus_tag=AC00_RS12680;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_000013513.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 87681 88376 . - . ID=gene-AC00_RS12675;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=AC00_RS12675;old_locus_tag=AC00_2487 NZ_JJLU01000083.1 Protein Homology CDS 87681 88376 . - 0 ID=cds-WP_023154625.1;Parent=gene-AC00_RS12675;Dbxref=GenBank:WP_023154625.1;Name=WP_023154625.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416709.1;locus_tag=AC00_RS12675;product=ferredoxin-type protein NapG;protein_id=WP_023154625.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 88383 90869 . - . ID=gene-AC00_RS12670;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=AC00_RS12670;old_locus_tag=AC00_2488 NZ_JJLU01000083.1 Protein Homology CDS 88383 90869 . - 0 ID=cds-WP_032281233.1;Parent=gene-AC00_RS12670;Dbxref=GenBank:WP_032281233.1;Name=WP_032281233.1;Ontology_term=GO:0042126,GO:0008940,GO:0030151,GO:0009325;gbkey=CDS;gene=napA;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311122.1;locus_tag=AC00_RS12670;product=periplasmic nitrate reductase subunit alpha;protein_id=WP_032281233.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 90866 91129 . - . ID=gene-AC00_RS12665;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=AC00_RS12665;old_locus_tag=AC00_2489 NZ_JJLU01000083.1 Protein Homology CDS 90866 91129 . - 0 ID=cds-WP_000557378.1;Parent=gene-AC00_RS12665;Dbxref=GenBank:WP_000557378.1;Name=WP_000557378.1;gbkey=CDS;gene=napD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311123.1;locus_tag=AC00_RS12665;product=chaperone NapD;protein_id=WP_000557378.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 91119 91613 . - . ID=gene-AC00_RS12660;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=AC00_RS12660;old_locus_tag=AC00_2490 NZ_JJLU01000083.1 Protein Homology CDS 91119 91613 . - 0 ID=cds-WP_000686723.1;Parent=gene-AC00_RS12660;Dbxref=GenBank:WP_000686723.1;Name=WP_000686723.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311124.1;locus_tag=AC00_RS12660;product=ferredoxin-type protein NapF;protein_id=WP_000686723.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 91722 91886 . + . ID=gene-AC00_RS30910;Name=yojO;gbkey=Gene;gene=yojO;gene_biotype=protein_coding;locus_tag=AC00_RS30910;old_locus_tag=AC00_2491 NZ_JJLU01000083.1 Protein Homology CDS 91722 91886 . + 0 ID=cds-WP_001301465.1;Parent=gene-AC00_RS30910;Dbxref=GenBank:WP_001301465.1;Name=WP_001301465.1;gbkey=CDS;gene=yojO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518801.1;locus_tag=AC00_RS30910;product=protein YojO;protein_id=WP_001301465.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 92020 92508 . + . ID=gene-AC00_RS12650;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=AC00_RS12650;old_locus_tag=AC00_2492 NZ_JJLU01000083.1 Protein Homology CDS 92020 92508 . + 0 ID=cds-WP_032281234.1;Parent=gene-AC00_RS12650;Dbxref=GenBank:WP_032281234.1;Name=WP_032281234.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311125.1;locus_tag=AC00_RS12650;product=serine protease inhibitor ecotin;protein_id=WP_032281234.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 92884 94530 . - . ID=gene-AC00_RS12645;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=AC00_RS12645;old_locus_tag=AC00_2493 NZ_JJLU01000083.1 Protein Homology CDS 92884 94530 . - 0 ID=cds-WP_000758066.1;Parent=gene-AC00_RS12645;Dbxref=GenBank:WP_000758066.1;Name=WP_000758066.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=AC00_RS12645;product=malate dehydrogenase (quinone);protein_id=WP_000758066.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 94748 96391 . - . ID=gene-AC00_RS12640;Name=yojI;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=AC00_RS12640;old_locus_tag=AC00_2494 NZ_JJLU01000083.1 Protein Homology CDS 94748 96391 . - 0 ID=cds-WP_000422182.1;Parent=gene-AC00_RS12640;Dbxref=GenBank:WP_000422182.1;Name=WP_000422182.1;gbkey=CDS;gene=yojI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=AC00_RS12640;product=microcin J25 efflux ABC transporter YojI;protein_id=WP_000422182.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 96467 97117 . - . ID=gene-AC00_RS12635;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=AC00_RS12635;old_locus_tag=AC00_2495 NZ_JJLU01000083.1 Protein Homology CDS 96467 97117 . - 0 ID=cds-WP_000884972.1;Parent=gene-AC00_RS12635;Dbxref=GenBank:WP_000884972.1;Name=WP_000884972.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311128.1;locus_tag=AC00_RS12635;product=DNA oxidative demethylase AlkB;protein_id=WP_000884972.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 97117 98181 . - . ID=gene-AC00_RS0125000;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=AC00_RS0125000;old_locus_tag=AC00_2496 NZ_JJLU01000083.1 Protein Homology CDS 97117 98181 . - 0 ID=cds-WP_032281235.1;Parent=gene-AC00_RS0125000;Dbxref=GenBank:WP_032281235.1;Name=WP_032281235.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708108.1;locus_tag=AC00_RS0125000;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_032281235.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 98255 99310 . - . ID=gene-AC00_RS12630;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=AC00_RS12630;old_locus_tag=AC00_2498 NZ_JJLU01000083.1 Protein Homology CDS 98255 99310 . - 0 ID=cds-WP_032281236.1;Parent=gene-AC00_RS12630;Dbxref=GenBank:WP_032281236.1;Name=WP_032281236.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311130.1;locus_tag=AC00_RS12630;product=FAD:protein FMN transferase ApbE;protein_id=WP_032281236.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 99422 100549 . - . ID=gene-AC00_RS12625;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=AC00_RS12625;old_locus_tag=AC00_2499 NZ_JJLU01000083.1 Protein Homology CDS 99422 100549 . - 0 ID=cds-WP_000865544.1;Parent=gene-AC00_RS12625;Dbxref=GenBank:WP_000865544.1;Name=WP_000865544.1;gbkey=CDS;gene=ompC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311131.1;locus_tag=AC00_RS12625;product=porin OmpC;protein_id=WP_000865544.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 101288 103960 . + . ID=gene-AC00_RS12615;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=AC00_RS12615;old_locus_tag=AC00_2501 NZ_JJLU01000083.1 Protein Homology CDS 101288 103960 . + 0 ID=cds-WP_001249109.1;Parent=gene-AC00_RS12615;Dbxref=GenBank:WP_001249109.1;Name=WP_001249109.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311132.1;locus_tag=AC00_RS12615;product=phosphotransferase RcsD;protein_id=WP_001249109.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 103977 104627 . + . ID=gene-AC00_RS12610;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=AC00_RS12610;old_locus_tag=AC00_2502 NZ_JJLU01000083.1 Protein Homology CDS 103977 104627 . + 0 ID=cds-WP_001061917.1;Parent=gene-AC00_RS12610;Dbxref=GenBank:WP_001061917.1;Name=WP_001061917.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=AC00_RS12610;product=response regulator transcription factor RcsB;protein_id=WP_001061917.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 105169 108018 . - . ID=gene-AC00_RS12605;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=AC00_RS12605;old_locus_tag=AC00_2504 NZ_JJLU01000083.1 Protein Homology CDS 105169 108018 . - 0 ID=cds-WP_000876013.1;Parent=gene-AC00_RS12605;Dbxref=GenBank:WP_000876013.1;Name=WP_000876013.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416722.2;locus_tag=AC00_RS12605;product=two-component system sensor histidine kinase RcsC;protein_id=WP_000876013.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 108293 109069 . - . ID=gene-AC00_RS12600;Name=yfaP;gbkey=Gene;gene=yfaP;gene_biotype=protein_coding;locus_tag=AC00_RS12600;old_locus_tag=AC00_2505 NZ_JJLU01000083.1 Protein Homology CDS 108293 109069 . - 0 ID=cds-WP_032281237.1;Parent=gene-AC00_RS12600;Dbxref=GenBank:WP_032281237.1;Name=WP_032281237.1;gbkey=CDS;gene=yfaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311135.1;locus_tag=AC00_RS12600;product=YfaP family protein;protein_id=WP_032281237.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 109074 110723 . - . ID=gene-AC00_RS12595;Name=yfaQ;gbkey=Gene;gene=yfaQ;gene_biotype=protein_coding;locus_tag=AC00_RS12595;old_locus_tag=AC00_2506 NZ_JJLU01000083.1 Protein Homology CDS 109074 110723 . - 0 ID=cds-WP_032281238.1;Parent=gene-AC00_RS12595;Dbxref=GenBank:WP_032281238.1;Name=WP_032281238.1;gbkey=CDS;gene=yfaQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416730.1;locus_tag=AC00_RS12595;product=YfaQ family protein;protein_id=WP_032281238.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 110724 115238 . - . ID=gene-AC00_RS12590;Name=AC00_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12590;old_locus_tag=AC00_2507 NZ_JJLU01000083.1 Protein Homology CDS 110724 115238 . - 0 ID=cds-WP_032281240.1;Parent=gene-AC00_RS12590;Dbxref=GenBank:WP_032281240.1;Name=WP_032281240.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000536590.1;locus_tag=AC00_RS12590;product=alpha-2-macroglobulin family protein;protein_id=WP_032281240.1;transl_table=11 NZ_JJLU01000083.1 RefSeq pseudogene 115262 115880 . - . ID=gene-AC00_RS12585;Name=yfaT;gbkey=Gene;gene=yfaT;gene_biotype=pseudogene;locus_tag=AC00_RS12585;old_locus_tag=AC00_2508;pseudo=true NZ_JJLU01000083.1 Protein Homology CDS 115262 115880 . - 0 ID=cds-AC00_RS12585;Parent=gene-AC00_RS12585;Note=frameshifted;gbkey=CDS;gene=yfaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311139.2;locus_tag=AC00_RS12585;product=DUF1175 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 115877 117565 . - . ID=gene-AC00_RS12580;Name=yfaA;gbkey=Gene;gene=yfaA;gene_biotype=protein_coding;locus_tag=AC00_RS12580;old_locus_tag=AC00_2509 NZ_JJLU01000083.1 Protein Homology CDS 115877 117565 . - 0 ID=cds-WP_032281241.1;Parent=gene-AC00_RS12580;Dbxref=GenBank:WP_032281241.1;Name=WP_032281241.1;gbkey=CDS;gene=yfaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416733.4;locus_tag=AC00_RS12580;product=DUF2138 domain-containing protein;protein_id=WP_032281241.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 117714 120341 . - . ID=gene-AC00_RS12575;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AC00_RS12575;old_locus_tag=AC00_2510 NZ_JJLU01000083.1 Protein Homology CDS 117714 120341 . - 0 ID=cds-WP_001281220.1;Parent=gene-AC00_RS12575;Dbxref=GenBank:WP_001281220.1;Name=WP_001281220.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311141.1;locus_tag=AC00_RS12575;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_001281220.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 120488 121210 . + . ID=gene-AC00_RS12570;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AC00_RS12570;old_locus_tag=AC00_2511 NZ_JJLU01000083.1 Protein Homology CDS 120488 121210 . + 0 ID=cds-WP_000990765.1;Parent=gene-AC00_RS12570;Dbxref=GenBank:WP_000990765.1;Name=WP_000990765.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416735.1;locus_tag=AC00_RS12570;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_000990765.1;transl_table=11 NZ_JJLU01000083.1 RefSeq pseudogene 121351 125141 . - . ID=gene-AC00_RS12565;Name=yfaL;gbkey=Gene;gene=yfaL;gene_biotype=pseudogene;locus_tag=AC00_RS12565;old_locus_tag=AC00_2512;pseudo=true NZ_JJLU01000083.1 Protein Homology CDS 121351 125141 . - 0 ID=cds-AC00_RS12565;Parent=gene-AC00_RS12565;Note=frameshifted%3B internal stop;Ontology_term=GO:0019867;gbkey=CDS;gene=yfaL;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311143.1;locus_tag=AC00_RS12565;product=AIDA-I family autotransporter adhesin YfaL/EhaC;pseudo=true;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 125566 125709 . - . ID=gene-AC00_RS31555;Name=ypaB;gbkey=Gene;gene=ypaB;gene_biotype=protein_coding;locus_tag=AC00_RS31555;old_locus_tag=AC00_2514 NZ_JJLU01000083.1 Protein Homology CDS 125566 125709 . - 0 ID=cds-WP_270671045.1;Parent=gene-AC00_RS31555;Dbxref=GenBank:WP_270671045.1;Name=WP_270671045.1;gbkey=CDS;gene=ypaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753443.1;locus_tag=AC00_RS31555;product=protein YpaB;protein_id=WP_270671045.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 125837 128122 . + . ID=gene-AC00_RS12560;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=AC00_RS12560;old_locus_tag=AC00_2515 NZ_JJLU01000083.1 Protein Homology CDS 125837 128122 . + 0 ID=cds-WP_032281244.1;Parent=gene-AC00_RS12560;Dbxref=GenBank:WP_032281244.1;Name=WP_032281244.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=AC00_RS12560;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_032281244.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 128356 129486 . + . ID=gene-AC00_RS12555;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=AC00_RS12555;old_locus_tag=AC00_2516 NZ_JJLU01000083.1 Protein Homology CDS 128356 129486 . + 0 ID=cds-WP_000332037.1;Parent=gene-AC00_RS12555;Dbxref=GenBank:WP_000332037.1;Name=WP_000332037.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=AC00_RS12555;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_000332037.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 129486 129740 . + . ID=gene-AC00_RS12550;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=AC00_RS12550;old_locus_tag=AC00_2517 NZ_JJLU01000083.1 Protein Homology CDS 129486 129740 . + 0 ID=cds-WP_001613486.1;Parent=gene-AC00_RS12550;Dbxref=GenBank:WP_001613486.1;Name=WP_001613486.1;gbkey=CDS;gene=yfaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311146.1;locus_tag=AC00_RS12550;product=ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE;protein_id=WP_001613486.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 129794 130444 . - . ID=gene-AC00_RS12545;Name=inaA;gbkey=Gene;gene=inaA;gene_biotype=protein_coding;locus_tag=AC00_RS12545;old_locus_tag=AC00_2518 NZ_JJLU01000083.1 Protein Homology CDS 129794 130444 . - 0 ID=cds-WP_032281245.1;Parent=gene-AC00_RS12545;Dbxref=GenBank:WP_032281245.1;Name=WP_032281245.1;gbkey=CDS;gene=inaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311147.1;locus_tag=AC00_RS12545;product=lipopolysaccharide kinase InaA;protein_id=WP_032281245.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 130525 131715 . - . ID=gene-AC00_RS12540;Name=AC00_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12540;old_locus_tag=AC00_2519 NZ_JJLU01000083.1 Protein Homology CDS 130525 131715 . - 0 ID=cds-WP_000660231.1;Parent=gene-AC00_RS12540;Dbxref=GenBank:WP_000660231.1;Name=WP_000660231.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311148.1;locus_tag=AC00_RS12540;product=MFS transporter;protein_id=WP_000660231.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 131880 132758 . + . ID=gene-AC00_RS12535;Name=AC00_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12535;old_locus_tag=AC00_2520 NZ_JJLU01000083.1 Protein Homology CDS 131880 132758 . + 0 ID=cds-WP_000176730.1;Parent=gene-AC00_RS12535;Dbxref=GenBank:WP_000176730.1;Name=WP_000176730.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461223.1;locus_tag=AC00_RS12535;product=LysR family transcriptional regulator;protein_id=WP_000176730.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 132803 133882 . - . ID=gene-AC00_RS12530;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=AC00_RS12530;old_locus_tag=AC00_2521 NZ_JJLU01000083.1 Protein Homology CDS 132803 133882 . - 0 ID=cds-WP_032281247.1;Parent=gene-AC00_RS12530;Dbxref=GenBank:WP_032281247.1;Name=WP_032281247.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000779088.1;locus_tag=AC00_RS12530;product=glycerophosphodiester phosphodiesterase;protein_id=WP_032281247.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 133887 135245 . - . ID=gene-AC00_RS12525;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AC00_RS12525;old_locus_tag=AC00_2522 NZ_JJLU01000083.1 Protein Homology CDS 133887 135245 . - 0 ID=cds-WP_000948724.1;Parent=gene-AC00_RS12525;Dbxref=GenBank:WP_000948724.1;Name=WP_000948724.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311152.1;locus_tag=AC00_RS12525;product=glycerol-3-phosphate transporter;protein_id=WP_000948724.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 135518 137146 . + . ID=gene-AC00_RS12520;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=AC00_RS12520;old_locus_tag=AC00_2524 NZ_JJLU01000083.1 Protein Homology CDS 135518 137146 . + 0 ID=cds-WP_032288235.1;Parent=gene-AC00_RS12520;Dbxref=GenBank:WP_032288235.1;Name=WP_032288235.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311153.1;locus_tag=AC00_RS12520;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_032288235.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 137136 138395 . + . ID=gene-AC00_RS12515;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=AC00_RS12515;old_locus_tag=AC00_2525 NZ_JJLU01000083.1 Protein Homology CDS 137136 138395 . + 0 ID=cds-WP_032281249.1;Parent=gene-AC00_RS12515;Dbxref=GenBank:WP_032281249.1;Name=WP_032281249.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311154.1;locus_tag=AC00_RS12515;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_032281249.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 138392 139582 . + . ID=gene-AC00_RS12510;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AC00_RS12510;old_locus_tag=AC00_2526 NZ_JJLU01000083.1 Protein Homology CDS 138392 139582 . + 0 ID=cds-WP_001000379.1;Parent=gene-AC00_RS12510;Dbxref=GenBank:WP_001000379.1;Name=WP_001000379.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311155.1;locus_tag=AC00_RS12510;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_001000379.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 139775 140728 . + . ID=gene-AC00_RS12505;Name=rpnE;gbkey=Gene;gene=rpnE;gene_biotype=protein_coding;locus_tag=AC00_RS12505;old_locus_tag=AC00_2528 NZ_JJLU01000083.1 Protein Homology CDS 139775 140728 . + 0 ID=cds-WP_032281250.1;Parent=gene-AC00_RS12505;Dbxref=GenBank:WP_032281250.1;Name=WP_032281250.1;gbkey=CDS;gene=rpnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012548938.1;locus_tag=AC00_RS12505;product=ISNCY family transposase;protein_id=WP_032281250.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 140776 141987 . - . ID=gene-AC00_RS12500;Name=yfaY;gbkey=Gene;gene=yfaY;gene_biotype=protein_coding;locus_tag=AC00_RS12500;old_locus_tag=AC00_2529 NZ_JJLU01000083.1 Protein Homology CDS 140776 141987 . - 0 ID=cds-WP_032281251.1;Parent=gene-AC00_RS12500;Dbxref=GenBank:WP_032281251.1;Name=WP_032281251.1;gbkey=CDS;gene=yfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416752.1;locus_tag=AC00_RS12500;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_032281251.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 142087 142629 . - . ID=gene-AC00_RS12495;Name=yfaZ;gbkey=Gene;gene=yfaZ;gene_biotype=protein_coding;locus_tag=AC00_RS12495;old_locus_tag=AC00_2530 NZ_JJLU01000083.1 Protein Homology CDS 142087 142629 . - 0 ID=cds-WP_001301623.1;Parent=gene-AC00_RS12495;Dbxref=GenBank:WP_001301623.1;Name=WP_001301623.1;gbkey=CDS;gene=yfaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311165.2;locus_tag=AC00_RS12495;product=YfaZ family outer membrane protein;protein_id=WP_001301623.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 142908 143333 . + . ID=gene-AC00_RS12490;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=AC00_RS12490;old_locus_tag=AC00_2531 NZ_JJLU01000083.1 Protein Homology CDS 142908 143333 . + 0 ID=cds-WP_032281253.1;Parent=gene-AC00_RS12490;Dbxref=GenBank:WP_032281253.1;Name=WP_032281253.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311166.1;locus_tag=AC00_RS12490;product=nucleoside triphosphatase NudI;protein_id=WP_032281253.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 143372 143974 . - . ID=gene-AC00_RS12485;Name=ais;gbkey=Gene;gene=ais;gene_biotype=protein_coding;locus_tag=AC00_RS12485;old_locus_tag=AC00_2532 NZ_JJLU01000083.1 Protein Homology CDS 143372 143974 . - 0 ID=cds-WP_001625543.1;Parent=gene-AC00_RS12485;Dbxref=GenBank:WP_001625543.1;Name=WP_001625543.1;gbkey=CDS;gene=ais;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311167.1;locus_tag=AC00_RS12485;product=lipopolysaccharide core heptose(II)-phosphate phosphatase Ais;protein_id=WP_001625543.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 144282 145421 . + . ID=gene-AC00_RS12480;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=AC00_RS12480;old_locus_tag=AC00_2533 NZ_JJLU01000083.1 Protein Homology CDS 144282 145421 . + 0 ID=cds-WP_024184334.1;Parent=gene-AC00_RS12480;Dbxref=GenBank:WP_024184334.1;Name=WP_024184334.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024188371.1;locus_tag=AC00_RS12480;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_024184334.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 145425 146393 . + . ID=gene-AC00_RS12475;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=AC00_RS12475;old_locus_tag=AC00_2534 NZ_JJLU01000083.1 Protein Homology CDS 145425 146393 . + 0 ID=cds-WP_000461657.1;Parent=gene-AC00_RS12475;Dbxref=GenBank:WP_000461657.1;Name=WP_000461657.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416757.1;locus_tag=AC00_RS12475;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_000461657.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 146393 148375 . + . ID=gene-AC00_RS12470;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=AC00_RS12470;old_locus_tag=AC00_2535 NZ_JJLU01000083.1 Protein Homology CDS 146393 148375 . + 0 ID=cds-WP_032288236.1;Parent=gene-AC00_RS12470;Dbxref=GenBank:WP_032288236.1;Name=WP_032288236.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311170.1;locus_tag=AC00_RS12470;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_032288236.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 148372 149262 . + . ID=gene-AC00_RS12465;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=AC00_RS12465;old_locus_tag=AC00_2536 NZ_JJLU01000083.1 Protein Homology CDS 148372 149262 . + 0 ID=cds-WP_000169737.1;Parent=gene-AC00_RS12465;Dbxref=GenBank:WP_000169737.1;Name=WP_000169737.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311171.1;locus_tag=AC00_RS12465;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_000169737.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 149262 150914 . + . ID=gene-AC00_RS12460;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=AC00_RS12460;old_locus_tag=AC00_2537 NZ_JJLU01000083.1 Protein Homology CDS 149262 150914 . + 0 ID=cds-WP_032281257.1;Parent=gene-AC00_RS12460;Dbxref=GenBank:WP_032281257.1;Name=WP_032281257.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311172.1;locus_tag=AC00_RS12460;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_032281257.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 150911 151246 . + . ID=gene-AC00_RS12455;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=AC00_RS12455;old_locus_tag=AC00_2538 NZ_JJLU01000083.1 Protein Homology CDS 150911 151246 . + 0 ID=cds-WP_000638031.1;Parent=gene-AC00_RS12455;Dbxref=GenBank:WP_000638031.1;Name=WP_000638031.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588462.1;locus_tag=AC00_RS12455;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_000638031.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 151246 151632 . + . ID=gene-AC00_RS12450;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=AC00_RS12450;old_locus_tag=AC00_2539 NZ_JJLU01000083.1 Protein Homology CDS 151246 151632 . + 0 ID=cds-WP_000523880.1;Parent=gene-AC00_RS12450;Dbxref=GenBank:WP_000523880.1;Name=WP_000523880.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416761.4;locus_tag=AC00_RS12450;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_000523880.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 151626 151892 . - . ID=gene-AC00_RS12445;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=AC00_RS12445;old_locus_tag=AC00_2540 NZ_JJLU01000083.1 Protein Homology CDS 151626 151892 . - 0 ID=cds-WP_001297080.1;Parent=gene-AC00_RS12445;Dbxref=GenBank:WP_001297080.1;Name=WP_001297080.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416762.2;locus_tag=AC00_RS12445;product=signal transduction protein PmrD;protein_id=WP_001297080.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 152002 153357 . - . ID=gene-AC00_RS12440;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=AC00_RS12440;old_locus_tag=AC00_2541 NZ_JJLU01000083.1 Protein Homology CDS 152002 153357 . - 0 ID=cds-WP_032281258.1;Parent=gene-AC00_RS12440;Dbxref=GenBank:WP_032281258.1;Name=WP_032281258.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416763.1;locus_tag=AC00_RS12440;product=o-succinylbenzoate--CoA ligase;protein_id=WP_032281258.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 153354 154316 . - . ID=gene-AC00_RS12435;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=AC00_RS12435;old_locus_tag=AC00_2542 NZ_JJLU01000083.1 Protein Homology CDS 153354 154316 . - 0 ID=cds-WP_032281260.1;Parent=gene-AC00_RS12435;Dbxref=GenBank:WP_032281260.1;Name=WP_032281260.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416764.1;locus_tag=AC00_RS12435;product=o-succinylbenzoate synthase;protein_id=WP_032281260.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 154316 155173 . - . ID=gene-AC00_RS12430;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=AC00_RS12430;old_locus_tag=AC00_2543 NZ_JJLU01000083.1 Protein Homology CDS 154316 155173 . - 0 ID=cds-WP_000639996.1;Parent=gene-AC00_RS12430;Dbxref=GenBank:WP_000639996.1;Name=WP_000639996.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=AC00_RS12430;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_000639996.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 155188 155946 . - . ID=gene-AC00_RS12425;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=AC00_RS12425;old_locus_tag=AC00_2544 NZ_JJLU01000083.1 Protein Homology CDS 155188 155946 . - 0 ID=cds-WP_000600532.1;Parent=gene-AC00_RS12425;Dbxref=GenBank:WP_000600532.1;Name=WP_000600532.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311178.1;locus_tag=AC00_RS12425;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_000600532.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 155943 157613 . - . ID=gene-AC00_RS12420;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=AC00_RS12420;old_locus_tag=AC00_2545 NZ_JJLU01000083.1 Protein Homology CDS 155943 157613 . - 0 ID=cds-WP_032281261.1;Parent=gene-AC00_RS12420;Dbxref=GenBank:WP_032281261.1;Name=WP_032281261.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311179.1;locus_tag=AC00_RS12420;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_032281261.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 157702 158997 . - . ID=gene-AC00_RS12415;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=AC00_RS12415;old_locus_tag=AC00_2546 NZ_JJLU01000083.1 Protein Homology CDS 157702 158997 . - 0 ID=cds-WP_001191387.1;Parent=gene-AC00_RS12415;Dbxref=GenBank:WP_001191387.1;Name=WP_001191387.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311180.2;locus_tag=AC00_RS12415;product=isochorismate synthase MenF;protein_id=WP_001191387.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 159076 159381 . - . ID=gene-AC00_RS12410;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=AC00_RS12410;old_locus_tag=AC00_2547 NZ_JJLU01000083.1 Protein Homology CDS 159076 159381 . - 0 ID=cds-WP_000070621.1;Parent=gene-AC00_RS12410;Dbxref=GenBank:WP_000070621.1;Name=WP_000070621.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=AC00_RS12410;product=stress response protein ElaB;protein_id=WP_000070621.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 159436 159897 . - . ID=gene-AC00_RS12405;Name=elaA;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=AC00_RS12405;old_locus_tag=AC00_2548 NZ_JJLU01000083.1 Protein Homology CDS 159436 159897 . - 0 ID=cds-WP_000574087.1;Parent=gene-AC00_RS12405;Dbxref=GenBank:WP_000574087.1;Name=WP_000574087.1;gbkey=CDS;gene=elaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311182.1;locus_tag=AC00_RS12405;product=GNAT family N-acetyltransferase;protein_id=WP_000574087.1;transl_table=11 NZ_JJLU01000083.1 RefSeq gene 159962 160879 . + . ID=gene-AC00_RS12400;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=AC00_RS12400;old_locus_tag=AC00_2549 NZ_JJLU01000083.1 Protein Homology CDS 159962 160879 . + 0 ID=cds-WP_032281264.1;Parent=gene-AC00_RS12400;Dbxref=GenBank:WP_032281264.1;Name=WP_032281264.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311183.2;locus_tag=AC00_RS12400;product=ribonuclease BN;protein_id=WP_032281264.1;transl_table=11 NZ_JJLU01000083.1 RefSeq pseudogene 161067 161279 . + . ID=gene-AC00_RS12390;Name=AC00_RS12390;end_range=161279,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS12390;old_locus_tag=AC00_2551;partial=true;pseudo=true NZ_JJLU01000083.1 Protein Homology CDS 161067 161279 . + 0 ID=cds-AC00_RS12390;Parent=gene-AC00_RS12390;Note=ElaD%3B specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins%3B SseL in Salmonella is required for macrophage killing and virulence%2C and it is secreted by the salmonella pathogenicity island 2 type III secretion system%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=161279,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416772.1;locus_tag=AC00_RS12390;partial=true;product=deubiquitinase;pseudo=true;transl_table=11 NZ_JJLU01000083.1 RefSeq pseudogene 161296 161580 . - . ID=gene-AC00_RS12385;Name=AC00_RS12385;end_range=161580,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS12385;old_locus_tag=AC00_2552;partial=true;pseudo=true NZ_JJLU01000083.1 Protein Homology CDS 161296 161580 . - 0 ID=cds-AC00_RS12385;Parent=gene-AC00_RS12385;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=161580,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS12385;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000084.1 1 63730 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000084.1 RefSeq region 1 63730 . + . ID=NZ_JJLU01000084.1:1..63730;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000084.1 RefSeq gene 1 199 . - . ID=gene-AC00_RS12380;Name=AC00_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12380;old_locus_tag=AC00_2553;partial=true;start_range=.,1 NZ_JJLU01000084.1 Protein Homology CDS 1 199 . - 0 ID=cds-WP_000179198.1;Parent=gene-AC00_RS12380;Dbxref=GenBank:WP_000179198.1;Name=WP_000179198.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS12380;partial=true;product=IS1 family transposase;protein_id=WP_000179198.1;start_range=.,1;transl_table=11 NZ_JJLU01000084.1 RefSeq pseudogene 260 1270 . + . ID=gene-AC00_RS30415;Name=AC00_RS30415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30415;pseudo=true NZ_JJLU01000084.1 Protein Homology CDS 260 1270 . + 0 ID=cds-AC00_RS30415;Parent=gene-AC00_RS30415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311184.2;locus_tag=AC00_RS30415;product=ElaD/SseL family deubiquitinase;pseudo=true;transl_table=11 NZ_JJLU01000084.1 RefSeq pseudogene 1682 2258 . + . ID=gene-AC00_RS29660;Name=AC00_RS29660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29660;pseudo=true NZ_JJLU01000084.1 Protein Homology CDS 1682 2258 . + 0 ID=cds-AC00_RS29660;Parent=gene-AC00_RS29660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001374362.1;locus_tag=AC00_RS29660;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 2403 2906 . + . ID=gene-AC00_RS12375;Name=yfbM;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=AC00_RS12375;old_locus_tag=AC00_2557 NZ_JJLU01000084.1 Protein Homology CDS 2403 2906 . + 0 ID=cds-WP_032281268.1;Parent=gene-AC00_RS12375;Dbxref=GenBank:WP_032281268.1;Name=WP_032281268.1;gbkey=CDS;gene=yfbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416775.1;locus_tag=AC00_RS12375;product=YfbM family protein;protein_id=WP_032281268.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 2973 4430 . - . ID=gene-AC00_RS12370;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=AC00_RS12370;old_locus_tag=AC00_2558 NZ_JJLU01000084.1 Protein Homology CDS 2973 4430 . - 0 ID=cds-WP_000156701.1;Parent=gene-AC00_RS12370;Dbxref=GenBank:WP_000156701.1;Name=WP_000156701.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416779.2;locus_tag=AC00_RS12370;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_000156701.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 4437 5966 . - . ID=gene-AC00_RS12365;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=AC00_RS12365;old_locus_tag=AC00_2559 NZ_JJLU01000084.1 Protein Homology CDS 4437 5966 . - 0 ID=cds-WP_000926441.1;Parent=gene-AC00_RS12365;Dbxref=GenBank:WP_000926441.1;Name=WP_000926441.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=AC00_RS12365;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_000926441.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 6130 7971 . - . ID=gene-AC00_RS12360;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AC00_RS12360;old_locus_tag=AC00_2560 NZ_JJLU01000084.1 Protein Homology CDS 6130 7971 . - 0 ID=cds-WP_032281269.1;Parent=gene-AC00_RS12360;Dbxref=GenBank:WP_032281269.1;Name=WP_032281269.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=AC00_RS12360;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_032281269.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 7968 8270 . - . ID=gene-AC00_RS12355;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AC00_RS12355;old_locus_tag=AC00_2561 NZ_JJLU01000084.1 Protein Homology CDS 7968 8270 . - 0 ID=cds-WP_000612644.1;Parent=gene-AC00_RS12355;Dbxref=GenBank:WP_000612644.1;Name=WP_000612644.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=AC00_RS12355;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_000612644.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 8267 8821 . - . ID=gene-AC00_RS12350;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=AC00_RS12350;old_locus_tag=AC00_2562 NZ_JJLU01000084.1 Protein Homology CDS 8267 8821 . - 0 ID=cds-WP_000393511.1;Parent=gene-AC00_RS12350;Dbxref=GenBank:WP_000393511.1;Name=WP_000393511.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774950.1;locus_tag=AC00_RS12350;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_000393511.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 8833 9375 . - . ID=gene-AC00_RS12345;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AC00_RS12345;old_locus_tag=AC00_2563 NZ_JJLU01000084.1 Protein Homology CDS 8833 9375 . - 0 ID=cds-WP_000172749.1;Parent=gene-AC00_RS12345;Dbxref=GenBank:WP_000172749.1;Name=WP_000172749.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=AC00_RS12345;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_000172749.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 9390 10367 . - . ID=gene-AC00_RS12340;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AC00_RS12340;old_locus_tag=AC00_2564 NZ_JJLU01000084.1 Protein Homology CDS 9390 10367 . - 0 ID=cds-WP_000118507.1;Parent=gene-AC00_RS12340;Dbxref=GenBank:WP_000118507.1;Name=WP_000118507.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=AC00_RS12340;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_000118507.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 10364 13090 . - . ID=gene-AC00_RS12335;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AC00_RS12335;old_locus_tag=AC00_2565 NZ_JJLU01000084.1 Protein Homology CDS 10364 13090 . - 0 ID=cds-WP_032281272.1;Parent=gene-AC00_RS12335;Dbxref=GenBank:WP_032281272.1;Name=WP_032281272.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311194.2;locus_tag=AC00_RS12335;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_032281272.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 13143 14480 . - . ID=gene-AC00_RS12330;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AC00_RS12330;old_locus_tag=AC00_2566 NZ_JJLU01000084.1 Protein Homology CDS 13143 14480 . - 0 ID=cds-WP_000789502.1;Parent=gene-AC00_RS12330;Dbxref=GenBank:WP_000789502.1;Name=WP_000789502.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311195.1;locus_tag=AC00_RS12330;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_000789502.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 14477 14977 . - . ID=gene-AC00_RS12325;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=AC00_RS12325;old_locus_tag=AC00_2567 NZ_JJLU01000084.1 Protein Homology CDS 14477 14977 . - 0 ID=cds-WP_000545042.1;Parent=gene-AC00_RS12325;Dbxref=GenBank:WP_000545042.1;Name=WP_000545042.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416788.1;locus_tag=AC00_RS12325;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_000545042.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 14980 16782 . - . ID=gene-AC00_RS12320;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=AC00_RS12320;old_locus_tag=AC00_2568 NZ_JJLU01000084.1 Protein Homology CDS 14980 16782 . - 0 ID=cds-WP_000247878.1;Parent=gene-AC00_RS12320;Dbxref=GenBank:WP_000247878.1;Name=WP_000247878.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=AC00_RS12320;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_000247878.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 16876 17538 . - . ID=gene-AC00_RS12315;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=AC00_RS12315;old_locus_tag=AC00_2569 NZ_JJLU01000084.1 Protein Homology CDS 16876 17538 . - 0 ID=cds-WP_000386733.1;Parent=gene-AC00_RS12315;Dbxref=GenBank:WP_000386733.1;Name=WP_000386733.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311198.1;locus_tag=AC00_RS12315;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_000386733.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 17554 17997 . - . ID=gene-AC00_RS12310;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=AC00_RS12310;old_locus_tag=AC00_2570 NZ_JJLU01000084.1 Protein Homology CDS 17554 17997 . - 0 ID=cds-WP_000062997.1;Parent=gene-AC00_RS12310;Dbxref=GenBank:WP_000062997.1;Name=WP_000062997.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708170.1;locus_tag=AC00_RS12310;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_000062997.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 18628 19566 . - . ID=gene-AC00_RS12305;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=AC00_RS12305;old_locus_tag=AC00_2572 NZ_JJLU01000084.1 Protein Homology CDS 18628 19566 . - 0 ID=cds-WP_000622284.1;Parent=gene-AC00_RS12305;Dbxref=GenBank:WP_000622284.1;Name=WP_000622284.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=AC00_RS12305;product=transcriptional regulator LrhA;protein_id=WP_000622284.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 20486 21703 . + . ID=gene-AC00_RS12300;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=AC00_RS12300;old_locus_tag=AC00_2573 NZ_JJLU01000084.1 Protein Homology CDS 20486 21703 . + 0 ID=cds-WP_000074527.1;Parent=gene-AC00_RS12300;Dbxref=GenBank:WP_000074527.1;Name=WP_000074527.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416793.1;locus_tag=AC00_RS12300;product=alanine transaminase AlaA;protein_id=WP_000074527.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 21787 22386 . + . ID=gene-AC00_RS12295;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=AC00_RS12295;old_locus_tag=AC00_2574 NZ_JJLU01000084.1 Protein Homology CDS 21787 22386 . + 0 ID=cds-WP_032281274.1;Parent=gene-AC00_RS12295;Dbxref=GenBank:WP_032281274.1;Name=WP_032281274.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311202.1;locus_tag=AC00_RS12295;product=5'-deoxynucleotidase;protein_id=WP_032281274.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 22445 24277 . - . ID=gene-AC00_RS12290;Name=yfbS;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=AC00_RS12290;old_locus_tag=AC00_2575 NZ_JJLU01000084.1 Protein Homology CDS 22445 24277 . - 0 ID=cds-WP_001012899.1;Parent=gene-AC00_RS12290;Dbxref=GenBank:WP_001012899.1;Name=WP_001012899.1;Ontology_term=GO:0008324;gbkey=CDS;gene=yfbS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311203.1;locus_tag=AC00_RS12290;product=SLC13 family permease;protein_id=WP_001012899.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 24364 25014 . - . ID=gene-AC00_RS12285;Name=hxpA;gbkey=Gene;gene=hxpA;gene_biotype=protein_coding;locus_tag=AC00_RS12285;old_locus_tag=AC00_2576 NZ_JJLU01000084.1 Protein Homology CDS 24364 25014 . - 0 ID=cds-WP_001203399.1;Parent=gene-AC00_RS12285;Dbxref=GenBank:WP_001203399.1;Name=WP_001203399.1;gbkey=CDS;gene=hxpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311204.1;locus_tag=AC00_RS12285;product=hexitol phosphatase HxpA;protein_id=WP_001203399.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 25025 25519 . - . ID=gene-AC00_RS12280;Name=yfbU;gbkey=Gene;gene=yfbU;gene_biotype=protein_coding;locus_tag=AC00_RS12280;old_locus_tag=AC00_2577 NZ_JJLU01000084.1 Protein Homology CDS 25025 25519 . - 0 ID=cds-WP_000426124.1;Parent=gene-AC00_RS12280;Dbxref=GenBank:WP_000426124.1;Name=WP_000426124.1;gbkey=CDS;gene=yfbU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=AC00_RS12280;product=YfbU family protein;protein_id=WP_000426124.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 25602 26057 . - . ID=gene-AC00_RS12275;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=AC00_RS12275;old_locus_tag=AC00_2578 NZ_JJLU01000084.1 Protein Homology CDS 25602 26057 . - 0 ID=cds-WP_000106627.1;Parent=gene-AC00_RS12275;Dbxref=GenBank:WP_000106627.1;Name=WP_000106627.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129545.1;locus_tag=AC00_RS12275;product=terminus macrodomain insulation protein YfbV;protein_id=WP_000106627.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 26395 27597 . + . ID=gene-AC00_RS12265;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=AC00_RS12265;old_locus_tag=AC00_2580 NZ_JJLU01000084.1 Protein Homology CDS 26395 27597 . + 0 ID=cds-WP_000095707.1;Parent=gene-AC00_RS12265;Dbxref=GenBank:WP_000095707.1;Name=WP_000095707.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=AC00_RS12265;product=acetate kinase;protein_id=WP_000095707.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 27672 29816 . + . ID=gene-AC00_RS12260;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AC00_RS12260;old_locus_tag=AC00_2581 NZ_JJLU01000084.1 Protein Homology CDS 27672 29816 . + 0 ID=cds-WP_000086716.1;Parent=gene-AC00_RS12260;Dbxref=GenBank:WP_000086716.1;Name=WP_000086716.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311208.1;locus_tag=AC00_RS12260;product=phosphate acetyltransferase;protein_id=WP_000086716.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 30006 31526 . + . ID=gene-AC00_RS12255;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=AC00_RS12255;old_locus_tag=AC00_2582 NZ_JJLU01000084.1 Protein Homology CDS 30006 31526 . + 0 ID=cds-WP_032281276.1;Parent=gene-AC00_RS12255;Dbxref=GenBank:WP_032281276.1;Name=WP_032281276.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416801.2;locus_tag=AC00_RS12255;product=putative basic amino acid antiporter YfcC;protein_id=WP_032281276.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 31559 32101 . - . ID=gene-AC00_RS12250;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=AC00_RS12250;old_locus_tag=AC00_2583 NZ_JJLU01000084.1 Protein Homology CDS 31559 32101 . - 0 ID=cds-WP_000437935.1;Parent=gene-AC00_RS12250;Dbxref=GenBank:WP_000437935.1;Name=WP_000437935.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311210.1;locus_tag=AC00_RS12250;product=NUDIX hydrolase YfcD;protein_id=WP_000437935.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 32159 32710 . - . ID=gene-AC00_RS12245;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=AC00_RS12245;old_locus_tag=AC00_2584 NZ_JJLU01000084.1 Protein Homology CDS 32159 32710 . - 0 ID=cds-WP_000772452.1;Parent=gene-AC00_RS12245;Dbxref=GenBank:WP_000772452.1;Name=WP_000772452.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=AC00_RS12245;product=phosphodiesterase;protein_id=WP_000772452.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 32766 33410 . - . ID=gene-AC00_RS12240;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=AC00_RS12240;old_locus_tag=AC00_2585 NZ_JJLU01000084.1 Protein Homology CDS 32766 33410 . - 0 ID=cds-WP_032281278.1;Parent=gene-AC00_RS12240;Dbxref=GenBank:WP_032281278.1;Name=WP_032281278.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311212.1;locus_tag=AC00_RS12240;product=glutathione transferase;protein_id=WP_032281278.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 33546 34193 . + . ID=gene-AC00_RS12235;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=AC00_RS12235;old_locus_tag=AC00_2586 NZ_JJLU01000084.1 Protein Homology CDS 33546 34193 . + 0 ID=cds-WP_000566499.1;Parent=gene-AC00_RS12235;Dbxref=GenBank:WP_000566499.1;Name=WP_000566499.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311213.1;locus_tag=AC00_RS12235;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_000566499.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 34250 34612 . + . ID=gene-AC00_RS12230;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=AC00_RS12230;old_locus_tag=AC00_2587 NZ_JJLU01000084.1 Protein Homology CDS 34250 34612 . + 0 ID=cds-WP_000068457.1;Parent=gene-AC00_RS12230;Dbxref=GenBank:WP_000068457.1;Name=WP_000068457.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311214.1;locus_tag=AC00_RS12230;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_000068457.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 34633 35526 . + . ID=gene-AC00_RS12225;Name=yfcH;gbkey=Gene;gene=yfcH;gene_biotype=protein_coding;locus_tag=AC00_RS12225;old_locus_tag=AC00_2588 NZ_JJLU01000084.1 Protein Homology CDS 34633 35526 . + 0 ID=cds-WP_001551399.1;Parent=gene-AC00_RS12225;Dbxref=GenBank:WP_001551399.1;Name=WP_001551399.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yfcH;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=AC00_RS12225;product=TIGR01777 family oxidoreductase;protein_id=WP_001551399.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 35574 36464 . - . ID=gene-AC00_RS12220;Name=rpnB;gbkey=Gene;gene=rpnB;gene_biotype=protein_coding;locus_tag=AC00_RS12220;old_locus_tag=AC00_2589 NZ_JJLU01000084.1 Protein Homology CDS 35574 36464 . - 0 ID=cds-WP_032281280.1;Parent=gene-AC00_RS12220;Dbxref=GenBank:WP_032281280.1;Name=WP_032281280.1;gbkey=CDS;gene=rpnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416808.1;locus_tag=AC00_RS12220;product=recombination-promoting nuclease RpnB;protein_id=WP_032281280.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 36661 37434 . - . ID=gene-AC00_RS12215;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=AC00_RS12215;old_locus_tag=AC00_2590 NZ_JJLU01000084.1 Protein Homology CDS 36661 37434 . - 0 ID=cds-WP_001293612.1;Parent=gene-AC00_RS12215;Dbxref=GenBank:WP_001293612.1;Name=WP_001293612.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=AC00_RS12215;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_001293612.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 37442 38158 . - . ID=gene-AC00_RS12210;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=AC00_RS12210;old_locus_tag=AC00_2591 NZ_JJLU01000084.1 Protein Homology CDS 37442 38158 . - 0 ID=cds-WP_000569958.1;Parent=gene-AC00_RS12210;Dbxref=GenBank:WP_000569958.1;Name=WP_000569958.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;gene=hisM;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311218.1;locus_tag=AC00_RS12210;product=ABC transporter permease;protein_id=WP_000569958.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 38155 38841 . - . ID=gene-AC00_RS12205;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=AC00_RS12205;old_locus_tag=AC00_2592 NZ_JJLU01000084.1 Protein Homology CDS 38155 38841 . - 0 ID=cds-WP_000965518.1;Parent=gene-AC00_RS12205;Dbxref=GenBank:WP_000965518.1;Name=WP_000965518.1;gbkey=CDS;gene=hisQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=AC00_RS12205;product=histidine ABC transporter permease HisQ;protein_id=WP_000965518.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 38931 39713 . - . ID=gene-AC00_RS12200;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=AC00_RS12200;old_locus_tag=AC00_2593 NZ_JJLU01000084.1 Protein Homology CDS 38931 39713 . - 0 ID=cds-WP_000737621.1;Parent=gene-AC00_RS12200;Dbxref=GenBank:WP_000737621.1;Name=WP_000737621.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=AC00_RS12200;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_000737621.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 39934 40716 . - . ID=gene-AC00_RS12195;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=AC00_RS12195;old_locus_tag=AC00_2594 NZ_JJLU01000084.1 Protein Homology CDS 39934 40716 . - 0 ID=cds-WP_000748261.1;Parent=gene-AC00_RS12195;Dbxref=GenBank:WP_000748261.1;Name=WP_000748261.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311221.1;locus_tag=AC00_RS12195;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_000748261.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 40982 41551 . - . ID=gene-AC00_RS12190;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=AC00_RS12190;old_locus_tag=AC00_2595 NZ_JJLU01000084.1 Protein Homology CDS 40982 41551 . - 0 ID=cds-WP_000825700.1;Parent=gene-AC00_RS12190;Dbxref=GenBank:WP_000825700.1;Name=WP_000825700.1;gbkey=CDS;gene=ubiX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=AC00_RS12190;product=flavin prenyltransferase UbiX;protein_id=WP_000825700.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 41646 43163 . - . ID=gene-AC00_RS12185;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AC00_RS12185;old_locus_tag=AC00_2596 NZ_JJLU01000084.1 Protein Homology CDS 41646 43163 . - 0 ID=cds-WP_000334220.1;Parent=gene-AC00_RS12185;Dbxref=GenBank:WP_000334220.1;Name=WP_000334220.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=AC00_RS12185;product=amidophosphoribosyltransferase;protein_id=WP_000334220.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 43200 43688 . - . ID=gene-AC00_RS12180;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=AC00_RS12180;old_locus_tag=AC00_2597 NZ_JJLU01000084.1 Protein Homology CDS 43200 43688 . - 0 ID=cds-WP_000262113.1;Parent=gene-AC00_RS12180;Dbxref=GenBank:WP_000262113.1;Name=WP_000262113.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=AC00_RS12180;product=colicin V production protein;protein_id=WP_000262113.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 44129 44791 . - . ID=gene-AC00_RS12175;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=AC00_RS12175;old_locus_tag=AC00_2599 NZ_JJLU01000084.1 Protein Homology CDS 44129 44791 . - 0 ID=cds-WP_032281281.1;Parent=gene-AC00_RS12175;Dbxref=GenBank:WP_032281281.1;Name=WP_032281281.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416817.2;locus_tag=AC00_RS12175;product=cell division protein DedD;protein_id=WP_032281281.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 44781 46049 . - . ID=gene-AC00_RS12170;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=AC00_RS12170;old_locus_tag=AC00_2600 NZ_JJLU01000084.1 Protein Homology CDS 44781 46049 . - 0 ID=cds-WP_000584575.1;Parent=gene-AC00_RS12170;Dbxref=GenBank:WP_000584575.1;Name=WP_000584575.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416818.1;locus_tag=AC00_RS12170;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_000584575.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 46119 47033 . - . ID=gene-AC00_RS12165;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AC00_RS12165;old_locus_tag=AC00_2601 NZ_JJLU01000084.1 Protein Homology CDS 46119 47033 . - 0 ID=cds-WP_000118404.1;Parent=gene-AC00_RS12165;Dbxref=GenBank:WP_000118404.1;Name=WP_000118404.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311227.1;locus_tag=AC00_RS12165;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_000118404.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 47189 47848 . - . ID=gene-AC00_RS12160;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=AC00_RS12160;old_locus_tag=AC00_2602 NZ_JJLU01000084.1 Protein Homology CDS 47189 47848 . - 0 ID=cds-WP_000364335.1;Parent=gene-AC00_RS12160;Dbxref=GenBank:WP_000364335.1;Name=WP_000364335.1;gbkey=CDS;gene=dedA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311228.1;locus_tag=AC00_RS12160;product=DedA family protein;protein_id=WP_000364335.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 47931 48743 . - . ID=gene-AC00_RS12155;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AC00_RS12155;old_locus_tag=AC00_2603 NZ_JJLU01000084.1 Protein Homology CDS 47931 48743 . - 0 ID=cds-WP_001283590.1;Parent=gene-AC00_RS12155;Dbxref=GenBank:WP_001283590.1;Name=WP_001283590.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=AC00_RS12155;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001283590.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 48743 49756 . - . ID=gene-AC00_RS12150;Name=usg;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=AC00_RS12150;old_locus_tag=AC00_2604 NZ_JJLU01000084.1 Protein Homology CDS 48743 49756 . - 0 ID=cds-WP_001289167.1;Parent=gene-AC00_RS12150;Dbxref=GenBank:WP_001289167.1;Name=WP_001289167.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;gene=usg;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416822.1;locus_tag=AC00_RS12150;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_001289167.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 49822 50958 . - . ID=gene-AC00_RS12145;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=AC00_RS12145;old_locus_tag=AC00_2605 NZ_JJLU01000084.1 Protein Homology CDS 49822 50958 . - 0 ID=cds-WP_032281284.1;Parent=gene-AC00_RS12145;Dbxref=GenBank:WP_032281284.1;Name=WP_032281284.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311231.1;locus_tag=AC00_RS12145;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_032281284.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 51057 52052 . + . ID=gene-AC00_RS12140;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=AC00_RS12140;old_locus_tag=AC00_2606 NZ_JJLU01000084.1 Protein Homology CDS 51057 52052 . + 0 ID=cds-WP_032281285.1;Parent=gene-AC00_RS12140;Dbxref=GenBank:WP_032281285.1;Name=WP_032281285.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311232.1;locus_tag=AC00_RS12140;product=flagella biosynthesis regulator Flk;protein_id=WP_032281285.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 52049 53227 . - . ID=gene-AC00_RS12135;Name=yfcJ;gbkey=Gene;gene=yfcJ;gene_biotype=protein_coding;locus_tag=AC00_RS12135;old_locus_tag=AC00_2607 NZ_JJLU01000084.1 Protein Homology CDS 52049 53227 . - 0 ID=cds-WP_000127789.1;Parent=gene-AC00_RS12135;Dbxref=GenBank:WP_000127789.1;Name=WP_000127789.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yfcJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311233.1;locus_tag=AC00_RS12135;product=arabinose transporter;protein_id=WP_000127789.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 53502 54722 . - . ID=gene-AC00_RS12130;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=AC00_RS12130;old_locus_tag=AC00_2608 NZ_JJLU01000084.1 Protein Homology CDS 53502 54722 . - 0 ID=cds-WP_000817178.1;Parent=gene-AC00_RS12130;Dbxref=GenBank:WP_000817178.1;Name=WP_000817178.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416826.1;locus_tag=AC00_RS12130;product=beta-ketoacyl-ACP synthase I;protein_id=WP_000817178.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 54881 56887 . + . ID=gene-AC00_RS12125;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=AC00_RS12125;old_locus_tag=AC00_2609 NZ_JJLU01000084.1 Protein Homology CDS 54881 56887 . + 0 ID=cds-WP_032281287.1;Parent=gene-AC00_RS12125;Dbxref=GenBank:WP_032281287.1;Name=WP_032281287.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311235.2;locus_tag=AC00_RS12125;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_032281287.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 57008 57286 . - . ID=gene-AC00_RS12120;Name=yfcL;gbkey=Gene;gene=yfcL;gene_biotype=protein_coding;locus_tag=AC00_RS12120;old_locus_tag=AC00_2610 NZ_JJLU01000084.1 Protein Homology CDS 57008 57286 . - 0 ID=cds-WP_000559764.1;Parent=gene-AC00_RS12120;Dbxref=GenBank:WP_000559764.1;Name=WP_000559764.1;gbkey=CDS;gene=yfcL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311236.1;locus_tag=AC00_RS12120;product=YfcL family protein;protein_id=WP_000559764.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 57320 57868 . - . ID=gene-AC00_RS12115;Name=epmC;gbkey=Gene;gene=epmC;gene_biotype=protein_coding;locus_tag=AC00_RS12115;old_locus_tag=AC00_2611 NZ_JJLU01000084.1 Protein Homology CDS 57320 57868 . - 0 ID=cds-WP_001089222.1;Parent=gene-AC00_RS12115;Dbxref=GenBank:WP_001089222.1;Name=WP_001089222.1;gbkey=CDS;gene=epmC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416829.1;locus_tag=AC00_RS12115;product=elongation factor P hydroxylase;protein_id=WP_001089222.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 57868 58677 . - . ID=gene-AC00_RS12110;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=AC00_RS12110;old_locus_tag=AC00_2612 NZ_JJLU01000084.1 Protein Homology CDS 57868 58677 . - 0 ID=cds-WP_000447361.1;Parent=gene-AC00_RS12110;Dbxref=GenBank:WP_000447361.1;Name=WP_000447361.1;gbkey=CDS;gene=yfcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311238.1;locus_tag=AC00_RS12110;product=sulfite exporter TauE/SafE family protein;protein_id=WP_000447361.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 58677 59501 . - . ID=gene-AC00_RS12105;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AC00_RS12105;old_locus_tag=AC00_2613 NZ_JJLU01000084.1 Protein Homology CDS 58677 59501 . - 0 ID=cds-WP_032281289.1;Parent=gene-AC00_RS12105;Dbxref=GenBank:WP_032281289.1;Name=WP_032281289.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=AC00_RS12105;product=penicillin-insensitive murein endopeptidase;protein_id=WP_032281289.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 59505 60590 . - . ID=gene-AC00_RS12100;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AC00_RS12100;old_locus_tag=AC00_2614 NZ_JJLU01000084.1 Protein Homology CDS 59505 60590 . - 0 ID=cds-WP_032281290.1;Parent=gene-AC00_RS12100;Dbxref=GenBank:WP_032281290.1;Name=WP_032281290.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=AC00_RS12100;product=chorismate synthase;protein_id=WP_032281290.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 60625 61557 . - . ID=gene-AC00_RS12095;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AC00_RS12095;old_locus_tag=AC00_2615 NZ_JJLU01000084.1 Protein Homology CDS 60625 61557 . - 0 ID=cds-WP_001306448.1;Parent=gene-AC00_RS12095;Dbxref=GenBank:WP_001306448.1;Name=WP_001306448.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=AC00_RS12095;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_001306448.1;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 61723 62274 . + . ID=gene-AC00_RS12090;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=AC00_RS12090;old_locus_tag=AC00_2616 NZ_JJLU01000084.1 Protein Homology CDS 61723 62274 . + 0 ID=cds-WP_023308129.1;Parent=gene-AC00_RS12090;Dbxref=GenBank:WP_023308129.1;Name=WP_023308129.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311241.3;locus_tag=AC00_RS12090;product=endonuclease SmrB;protein_id=WP_023308129.1;transl_table=11 NZ_JJLU01000084.1 RefSeq pseudogene 62344 62685 . - . ID=gene-AC00_RS0125025;Name=yfcO;end_range=62685,.;gbkey=Gene;gene=yfcO;gene_biotype=pseudogene;locus_tag=AC00_RS0125025;old_locus_tag=AC00_2617;partial=true;pseudo=true NZ_JJLU01000084.1 Protein Homology CDS 62344 62685 . - 0 ID=cds-AC00_RS0125025;Parent=gene-AC00_RS0125025;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=62685,.;gbkey=CDS;gene=yfcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416835.2;locus_tag=AC00_RS0125025;partial=true;product=fimbrial adhesin YfcO;pseudo=true;transl_table=11 NZ_JJLU01000084.1 RefSeq gene 62930 63475 . - . ID=gene-AC00_RS12085;Name=AC00_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12085;old_locus_tag=AC00_2618 NZ_JJLU01000084.1 Protein Homology CDS 62930 63475 . - 0 ID=cds-WP_001041872.1;Parent=gene-AC00_RS12085;Dbxref=GenBank:WP_001041872.1;Name=WP_001041872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041872.1;locus_tag=AC00_RS12085;product=transcriptional regulator;protein_id=WP_001041872.1;transl_table=11 ##sequence-region NZ_JJLU01000085.1 1 121834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000085.1 RefSeq region 1 121834 . + . ID=NZ_JJLU01000085.1:1..121834;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000085.1 RefSeq pseudogene 1 221 . + . ID=gene-AC00_RS0125030;Name=AC00_RS0125030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125030;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000085.1 Protein Homology CDS 1 221 . + 2 ID=cds-AC00_RS0125030;Parent=gene-AC00_RS0125030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313025.1;locus_tag=AC00_RS0125030;partial=true;product=protein mom;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 239 778 . - . ID=gene-AC00_RS30915;Name=AC00_RS30915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30915 NZ_JJLU01000085.1 Protein Homology CDS 239 778 . - 0 ID=cds-WP_248790350.1;Parent=gene-AC00_RS30915;Dbxref=GenBank:WP_248790350.1;Name=WP_248790350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022690.6;locus_tag=AC00_RS30915;product=StfH/YfcO family fimbrial adhesin;protein_id=WP_248790350.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 846 1385 . - . ID=gene-AC00_RS12080;Name=AC00_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12080;old_locus_tag=AC00_2620 NZ_JJLU01000085.1 Protein Homology CDS 846 1385 . - 0 ID=cds-WP_032281313.1;Parent=gene-AC00_RS12080;Dbxref=GenBank:WP_032281313.1;Name=WP_032281313.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242288.1;locus_tag=AC00_RS12080;product=fimbrial protein;protein_id=WP_032281313.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 1382 1870 . - . ID=gene-AC00_RS12075;Name=AC00_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12075;old_locus_tag=AC00_2621 NZ_JJLU01000085.1 Protein Homology CDS 1382 1870 . - 0 ID=cds-WP_032281314.1;Parent=gene-AC00_RS12075;Dbxref=GenBank:WP_032281314.1;Name=WP_032281314.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416837.1;locus_tag=AC00_RS12075;product=fimbrial protein;protein_id=WP_032281314.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 1867 2364 . - . ID=gene-AC00_RS0125040;Name=AC00_RS0125040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125040;old_locus_tag=AC00_2622 NZ_JJLU01000085.1 Protein Homology CDS 1867 2364 . - 0 ID=cds-WP_032281315.1;Parent=gene-AC00_RS0125040;Dbxref=GenBank:WP_032281315.1;Name=WP_032281315.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733155.1;locus_tag=AC00_RS0125040;product=fimbrial protein;protein_id=WP_032281315.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 2380 3132 . - . ID=gene-AC00_RS12070;Name=AC00_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12070;old_locus_tag=AC00_2623 NZ_JJLU01000085.1 Protein Homology CDS 2380 3132 . - 0 ID=cds-WP_032281317.1;Parent=gene-AC00_RS12070;Dbxref=GenBank:WP_032281317.1;Name=WP_032281317.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416839.1;locus_tag=AC00_RS12070;product=fimbria/pilus periplasmic chaperone;protein_id=WP_032281317.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 3155 5794 . - . ID=gene-AC00_RS12065;Name=AC00_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12065;old_locus_tag=AC00_2624 NZ_JJLU01000085.1 Protein Homology CDS 3155 5794 . - 0 ID=cds-WP_032288244.1;Parent=gene-AC00_RS12065;Dbxref=GenBank:WP_032288244.1;Name=WP_032288244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311248.1;locus_tag=AC00_RS12065;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_032288244.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 5876 6439 . - . ID=gene-AC00_RS12060;Name=yfcV;gbkey=Gene;gene=yfcV;gene_biotype=protein_coding;locus_tag=AC00_RS12060;old_locus_tag=AC00_2625 NZ_JJLU01000085.1 Protein Homology CDS 5876 6439 . - 0 ID=cds-WP_000033336.1;Parent=gene-AC00_RS12060;Dbxref=GenBank:WP_000033336.1;Name=WP_000033336.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=yfcV;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311249.1;locus_tag=AC00_RS12060;product=fimbrial protein;protein_id=WP_000033336.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 7085 7570 . - . ID=gene-AC00_RS12055;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=AC00_RS12055;old_locus_tag=AC00_2626 NZ_JJLU01000085.1 Protein Homology CDS 7085 7570 . - 0 ID=cds-WP_032281319.1;Parent=gene-AC00_RS12055;Dbxref=GenBank:WP_032281319.1;Name=WP_032281319.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311250.1;locus_tag=AC00_RS12055;product=phosphohistidine phosphatase SixA;protein_id=WP_032281319.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 7773 9917 . - . ID=gene-AC00_RS12050;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=AC00_RS12050;old_locus_tag=AC00_2627 NZ_JJLU01000085.1 Protein Homology CDS 7773 9917 . - 0 ID=cds-WP_032281320.1;Parent=gene-AC00_RS12050;Dbxref=GenBank:WP_032281320.1;Name=WP_032281320.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426149.1;locus_tag=AC00_RS12050;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_032281320.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 9917 11227 . - . ID=gene-AC00_RS12045;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=AC00_RS12045;old_locus_tag=AC00_2628 NZ_JJLU01000085.1 Protein Homology CDS 9917 11227 . - 0 ID=cds-WP_032288246.1;Parent=gene-AC00_RS12045;Dbxref=GenBank:WP_032288246.1;Name=WP_032288246.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=AC00_RS12045;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_032288246.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 11400 11684 . - . ID=gene-AC00_RS12040;Name=yfcZ;gbkey=Gene;gene=yfcZ;gene_biotype=protein_coding;locus_tag=AC00_RS12040;old_locus_tag=AC00_2629 NZ_JJLU01000085.1 Protein Homology CDS 11400 11684 . - 0 ID=cds-WP_000030901.1;Parent=gene-AC00_RS12040;Dbxref=GenBank:WP_000030901.1;Name=WP_000030901.1;gbkey=CDS;gene=yfcZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=AC00_RS12040;product=YfcZ/YiiS family protein;protein_id=WP_000030901.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 12056 13396 . + . ID=gene-AC00_RS12035;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=AC00_RS12035;old_locus_tag=AC00_2630 NZ_JJLU01000085.1 Protein Homology CDS 12056 13396 . + 0 ID=cds-WP_001295701.1;Parent=gene-AC00_RS12035;Dbxref=GenBank:WP_001295701.1;Name=WP_001295701.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416846.2;locus_tag=AC00_RS12035;product=long-chain fatty acid transporter FadL;protein_id=WP_001295701.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 13763 15007 . + . ID=gene-AC00_RS12030;Name=AC00_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12030;old_locus_tag=AC00_2631 NZ_JJLU01000085.1 Protein Homology CDS 13763 15007 . + 0 ID=cds-WP_032281322.1;Parent=gene-AC00_RS12030;Dbxref=GenBank:WP_032281322.1;Name=WP_032281322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613541.1;locus_tag=AC00_RS12030;product=hypothetical protein;protein_id=WP_032281322.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 15188 15943 . - . ID=gene-AC00_RS12025;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=AC00_RS12025;old_locus_tag=AC00_2632 NZ_JJLU01000085.1 Protein Homology CDS 15188 15943 . - 0 ID=cds-WP_000776768.1;Parent=gene-AC00_RS12025;Dbxref=GenBank:WP_000776768.1;Name=WP_000776768.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311256.1;locus_tag=AC00_RS12025;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_000776768.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 16237 17169 . + . ID=gene-AC00_RS12020;Name=yfdC;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=AC00_RS12020;old_locus_tag=AC00_2634 NZ_JJLU01000085.1 Protein Homology CDS 16237 17169 . + 0 ID=cds-WP_032281325.1;Parent=gene-AC00_RS12020;Dbxref=GenBank:WP_032281325.1;Name=WP_032281325.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yfdC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311257.1;locus_tag=AC00_RS12020;product=formate/nitrite transporter family protein;protein_id=WP_032281325.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 17245 17316 . + . ID=gene-AC00_RS12015;Name=AC00_RS12015;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS12015;old_locus_tag=AC00_2635 NZ_JJLU01000085.1 tRNAscan-SE tRNA 17245 17316 . + . ID=rna-AC00_RS12015;Parent=gene-AC00_RS12015;anticodon=(pos:17278..17280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS12015;product=tRNA-Arg NZ_JJLU01000085.1 tRNAscan-SE exon 17245 17316 . + . ID=exon-AC00_RS12015-1;Parent=rna-AC00_RS12015;anticodon=(pos:17278..17280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS12015;product=tRNA-Arg NZ_JJLU01000085.1 RefSeq gene 17481 18641 . + . ID=gene-AC00_RS12010;Name=AC00_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12010;old_locus_tag=AC00_2636 NZ_JJLU01000085.1 Protein Homology CDS 17481 18641 . + 0 ID=cds-WP_032288248.1;Parent=gene-AC00_RS12010;Dbxref=GenBank:WP_032288248.1;Name=WP_032288248.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195404.1;locus_tag=AC00_RS12010;product=tyrosine-type recombinase/integrase;protein_id=WP_032288248.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 18816 19133 . - . ID=gene-AC00_RS12005;Name=AC00_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12005;old_locus_tag=AC00_2638 NZ_JJLU01000085.1 Protein Homology CDS 18816 19133 . - 0 ID=cds-WP_032281328.1;Parent=gene-AC00_RS12005;Dbxref=GenBank:WP_032281328.1;Name=WP_032281328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177040.1;locus_tag=AC00_RS12005;product=hypothetical protein;protein_id=WP_032281328.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 19133 19372 . - . ID=gene-AC00_RS12000;Name=AC00_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS12000;old_locus_tag=AC00_2639 NZ_JJLU01000085.1 Protein Homology CDS 19133 19372 . - 0 ID=cds-WP_032281330.1;Parent=gene-AC00_RS12000;Dbxref=GenBank:WP_032281330.1;Name=WP_032281330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693215.1;locus_tag=AC00_RS12000;product=hypothetical protein;protein_id=WP_032281330.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 19525 20637 . - . ID=gene-AC00_RS11995;Name=AC00_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11995;old_locus_tag=AC00_2640 NZ_JJLU01000085.1 GeneMarkS-2+ CDS 19525 20637 . - 0 ID=cds-WP_032288249.1;Parent=gene-AC00_RS11995;Dbxref=GenBank:WP_032288249.1;Name=WP_032288249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS11995;product=hypothetical protein;protein_id=WP_032288249.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 20704 20892 . - . ID=gene-AC00_RS11990;Name=AC00_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11990;old_locus_tag=AC00_2641 NZ_JJLU01000085.1 GeneMarkS-2+ CDS 20704 20892 . - 0 ID=cds-WP_032281333.1;Parent=gene-AC00_RS11990;Dbxref=GenBank:WP_032281333.1;Name=WP_032281333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS11990;product=hypothetical protein;protein_id=WP_032281333.1;transl_table=11 NZ_JJLU01000085.1 RefSeq pseudogene 21630 21941 . - . ID=gene-AC00_RS0125050;Name=stfP;gbkey=Gene;gene=stfP;gene_biotype=pseudogene;locus_tag=AC00_RS0125050;partial=true;pseudo=true;start_range=.,21630 NZ_JJLU01000085.1 Protein Homology CDS 21630 21941 . - 0 ID=cds-AC00_RS0125050;Parent=gene-AC00_RS0125050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=stfP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706263.1;locus_tag=AC00_RS0125050;partial=true;product=protein StfP;pseudo=true;start_range=.,21630;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 21945 22529 . - . ID=gene-AC00_RS11985;Name=ymfQ;gbkey=Gene;gene=ymfQ;gene_biotype=protein_coding;locus_tag=AC00_RS11985;old_locus_tag=AC00_2643 NZ_JJLU01000085.1 Protein Homology CDS 21945 22529 . - 0 ID=cds-WP_000383572.1;Parent=gene-AC00_RS11985;Dbxref=GenBank:WP_000383572.1;Name=WP_000383572.1;gbkey=CDS;gene=ymfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415671.1;locus_tag=AC00_RS11985;product=YmfQ family protein;protein_id=WP_000383572.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 22520 23578 . - . ID=gene-AC00_RS11980;Name=AC00_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11980;old_locus_tag=AC00_2644 NZ_JJLU01000085.1 Protein Homology CDS 22520 23578 . - 0 ID=cds-WP_032281334.1;Parent=gene-AC00_RS11980;Dbxref=GenBank:WP_032281334.1;Name=WP_032281334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536648.1;locus_tag=AC00_RS11980;product=baseplate J/gp47 family protein;protein_id=WP_032281334.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 23565 23990 . - . ID=gene-AC00_RS11975;Name=AC00_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11975;old_locus_tag=AC00_2645 NZ_JJLU01000085.1 Protein Homology CDS 23565 23990 . - 0 ID=cds-WP_000424732.1;Parent=gene-AC00_RS11975;Dbxref=GenBank:WP_000424732.1;Name=WP_000424732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000424727.1;locus_tag=AC00_RS11975;product=phage GP46 family protein;protein_id=WP_000424732.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 23990 24538 . - . ID=gene-AC00_RS11970;Name=AC00_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11970;old_locus_tag=AC00_2646 NZ_JJLU01000085.1 Protein Homology CDS 23990 24538 . - 0 ID=cds-WP_001522208.1;Parent=gene-AC00_RS11970;Dbxref=GenBank:WP_001522208.1;Name=WP_001522208.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364403.1;locus_tag=AC00_RS11970;product=phage baseplate assembly protein V;protein_id=WP_001522208.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 24538 25617 . - . ID=gene-AC00_RS11965;Name=AC00_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11965;old_locus_tag=AC00_2647 NZ_JJLU01000085.1 Protein Homology CDS 24538 25617 . - 0 ID=cds-WP_000999510.1;Parent=gene-AC00_RS11965;Dbxref=GenBank:WP_000999510.1;Name=WP_000999510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559673.1;locus_tag=AC00_RS11965;product=phage baseplate assembly protein;protein_id=WP_000999510.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 25614 26942 . - . ID=gene-AC00_RS11960;Name=AC00_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11960;old_locus_tag=AC00_2648 NZ_JJLU01000085.1 Protein Homology CDS 25614 26942 . - 0 ID=cds-WP_032281335.1;Parent=gene-AC00_RS11960;Dbxref=GenBank:WP_032281335.1;Name=WP_032281335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134766.1;locus_tag=AC00_RS11960;product=DNA circularization protein;protein_id=WP_032281335.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 27069 27521 . + . ID=gene-AC00_RS11955;Name=AC00_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11955;old_locus_tag=AC00_2649 NZ_JJLU01000085.1 Protein Homology CDS 27069 27521 . + 0 ID=cds-WP_032281336.1;Parent=gene-AC00_RS11955;Dbxref=GenBank:WP_032281336.1;Name=WP_032281336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884375.1;locus_tag=AC00_RS11955;product=OB-fold protein;protein_id=WP_032281336.1;transl_table=11 NZ_JJLU01000085.1 RefSeq pseudogene 27625 29328 . - . ID=gene-AC00_RS11950;Name=AC00_RS11950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS11950;old_locus_tag=AC00_2650;partial=true;pseudo=true;start_range=.,27625 NZ_JJLU01000085.1 Protein Homology CDS 27625 29328 . - 0 ID=cds-AC00_RS11950;Parent=gene-AC00_RS11950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000807176.1;locus_tag=AC00_RS11950;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,27625;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 29470 29739 . - . ID=gene-AC00_RS11945;Name=AC00_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11945;old_locus_tag=AC00_2651 NZ_JJLU01000085.1 Protein Homology CDS 29470 29739 . - 0 ID=cds-WP_000661054.1;Parent=gene-AC00_RS11945;Dbxref=GenBank:WP_000661054.1;Name=WP_000661054.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526907.1;locus_tag=AC00_RS11945;product=phage tail assembly protein;protein_id=WP_000661054.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 29739 30095 . - . ID=gene-AC00_RS11940;Name=AC00_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11940;old_locus_tag=AC00_2652 NZ_JJLU01000085.1 Protein Homology CDS 29739 30095 . - 0 ID=cds-WP_000090993.1;Parent=gene-AC00_RS11940;Dbxref=GenBank:WP_000090993.1;Name=WP_000090993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707866.1;locus_tag=AC00_RS11940;product=phage tail tube protein;protein_id=WP_000090993.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 30095 31591 . - . ID=gene-AC00_RS11935;Name=AC00_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11935;old_locus_tag=AC00_2653 NZ_JJLU01000085.1 Protein Homology CDS 30095 31591 . - 0 ID=cds-WP_032281338.1;Parent=gene-AC00_RS11935;Dbxref=GenBank:WP_032281338.1;Name=WP_032281338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707867.1;locus_tag=AC00_RS11935;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_032281338.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 31575 31745 . - . ID=gene-AC00_RS11930;Name=AC00_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11930;old_locus_tag=AC00_2654 NZ_JJLU01000085.1 Protein Homology CDS 31575 31745 . - 0 ID=cds-WP_032281340.1;Parent=gene-AC00_RS11930;Dbxref=GenBank:WP_032281340.1;Name=WP_032281340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497758.1;locus_tag=AC00_RS11930;product=DUF2635 domain-containing protein;protein_id=WP_032281340.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 31754 32314 . - . ID=gene-AC00_RS11925;Name=AC00_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11925;old_locus_tag=AC00_2655 NZ_JJLU01000085.1 Protein Homology CDS 31754 32314 . - 0 ID=cds-WP_000779281.1;Parent=gene-AC00_RS11925;Dbxref=GenBank:WP_000779281.1;Name=WP_000779281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244984.1;locus_tag=AC00_RS11925;product=phage tail terminator protein;protein_id=WP_000779281.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 32311 32817 . - . ID=gene-AC00_RS11920;Name=AC00_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11920;old_locus_tag=AC00_2656 NZ_JJLU01000085.1 Protein Homology CDS 32311 32817 . - 0 ID=cds-WP_000224838.1;Parent=gene-AC00_RS11920;Dbxref=GenBank:WP_000224838.1;Name=WP_000224838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001501060.1;locus_tag=AC00_RS11920;product=hypothetical protein;protein_id=WP_000224838.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 32792 33202 . - . ID=gene-AC00_RS11915;Name=AC00_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11915;old_locus_tag=AC00_2657 NZ_JJLU01000085.1 Protein Homology CDS 32792 33202 . - 0 ID=cds-WP_001579916.1;Parent=gene-AC00_RS11915;Dbxref=GenBank:WP_001579916.1;Name=WP_001579916.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000702387.1;locus_tag=AC00_RS11915;product=phage head closure protein;protein_id=WP_001579916.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 33199 33522 . - . ID=gene-AC00_RS11910;Name=AC00_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11910;old_locus_tag=AC00_2658 NZ_JJLU01000085.1 Protein Homology CDS 33199 33522 . - 0 ID=cds-WP_000927711.1;Parent=gene-AC00_RS11910;Dbxref=GenBank:WP_000927711.1;Name=WP_000927711.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001492759.1;locus_tag=AC00_RS11910;product=head-tail connector protein;protein_id=WP_000927711.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 33525 33725 . - . ID=gene-AC00_RS11905;Name=AC00_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11905;old_locus_tag=AC00_2659 NZ_JJLU01000085.1 Protein Homology CDS 33525 33725 . - 0 ID=cds-WP_032281342.1;Parent=gene-AC00_RS11905;Dbxref=GenBank:WP_032281342.1;Name=WP_032281342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001735262.1;locus_tag=AC00_RS11905;product=hypothetical protein;protein_id=WP_032281342.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 33775 34980 . - . ID=gene-AC00_RS11900;Name=AC00_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11900;old_locus_tag=AC00_2660 NZ_JJLU01000085.1 Protein Homology CDS 33775 34980 . - 0 ID=cds-WP_032281343.1;Parent=gene-AC00_RS11900;Dbxref=GenBank:WP_032281343.1;Name=WP_032281343.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559678.1;locus_tag=AC00_RS11900;product=phage major capsid protein;protein_id=WP_032281343.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 34995 35645 . - . ID=gene-AC00_RS11895;Name=AC00_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11895;old_locus_tag=AC00_2661 NZ_JJLU01000085.1 Protein Homology CDS 34995 35645 . - 0 ID=cds-WP_001193633.1;Parent=gene-AC00_RS11895;Dbxref=GenBank:WP_001193633.1;Name=WP_001193633.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001193639.1;locus_tag=AC00_RS11895;product=HK97 family phage prohead protease;protein_id=WP_001193633.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 35623 36864 . - . ID=gene-AC00_RS11890;Name=AC00_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11890;old_locus_tag=AC00_2662 NZ_JJLU01000085.1 Protein Homology CDS 35623 36864 . - 0 ID=cds-WP_032281345.1;Parent=gene-AC00_RS11890;Dbxref=GenBank:WP_032281345.1;Name=WP_032281345.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000466237.1;locus_tag=AC00_RS11890;product=phage portal protein;protein_id=WP_032281345.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 36864 37046 . - . ID=gene-AC00_RS11885;Name=ymfR;gbkey=Gene;gene=ymfR;gene_biotype=protein_coding;locus_tag=AC00_RS11885;old_locus_tag=AC00_2663 NZ_JJLU01000085.1 Protein Homology CDS 36864 37046 . - 0 ID=cds-WP_000605606.1;Parent=gene-AC00_RS11885;Dbxref=GenBank:WP_000605606.1;Name=WP_000605606.1;gbkey=CDS;gene=ymfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415668.1;locus_tag=AC00_RS11885;product=protein YmfR;protein_id=WP_000605606.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 37058 38791 . - . ID=gene-AC00_RS11880;Name=AC00_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11880;old_locus_tag=AC00_2664 NZ_JJLU01000085.1 Protein Homology CDS 37058 38791 . - 0 ID=cds-WP_032281346.1;Parent=gene-AC00_RS11880;Dbxref=GenBank:WP_032281346.1;Name=WP_032281346.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088170.1;locus_tag=AC00_RS11880;product=terminase large subunit;protein_id=WP_032281346.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 38788 39282 . - . ID=gene-AC00_RS11875;Name=AC00_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11875;old_locus_tag=AC00_2665 NZ_JJLU01000085.1 Protein Homology CDS 38788 39282 . - 0 ID=cds-WP_032281347.1;Parent=gene-AC00_RS11875;Dbxref=GenBank:WP_032281347.1;Name=WP_032281347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249564.1;locus_tag=AC00_RS11875;product=phage terminase small subunit P27 family;protein_id=WP_032281347.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 39408 39758 . - . ID=gene-AC00_RS11870;Name=AC00_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11870;old_locus_tag=AC00_2666 NZ_JJLU01000085.1 Protein Homology CDS 39408 39758 . - 0 ID=cds-WP_032281348.1;Parent=gene-AC00_RS11870;Dbxref=GenBank:WP_032281348.1;Name=WP_032281348.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001135225.1;locus_tag=AC00_RS11870;product=HNH endonuclease;protein_id=WP_032281348.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 40171 40428 . - . ID=gene-AC00_RS0125055;Name=AC00_RS0125055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125055;old_locus_tag=AC00_2667 NZ_JJLU01000085.1 Protein Homology CDS 40171 40428 . - 0 ID=cds-WP_001283921.1;Parent=gene-AC00_RS0125055;Dbxref=GenBank:WP_001283921.1;Name=WP_001283921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063373.1;locus_tag=AC00_RS0125055;product=hypothetical protein;protein_id=WP_001283921.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 40425 40922 . - . ID=gene-AC00_RS11865;Name=AC00_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11865;old_locus_tag=AC00_2668 NZ_JJLU01000085.1 Protein Homology CDS 40425 40922 . - 0 ID=cds-WP_000644480.1;Parent=gene-AC00_RS11865;Dbxref=GenBank:WP_000644480.1;Name=WP_000644480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001496757.1;locus_tag=AC00_RS11865;product=KilA-N domain-containing protein;protein_id=WP_000644480.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 41114 41557 . - . ID=gene-AC00_RS11860;Name=AC00_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11860;old_locus_tag=AC00_2669 NZ_JJLU01000085.1 Protein Homology CDS 41114 41557 . - 0 ID=cds-WP_032281350.1;Parent=gene-AC00_RS11860;Dbxref=GenBank:WP_032281350.1;Name=WP_032281350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009453323.1;locus_tag=AC00_RS11860;product=lysis protein;protein_id=WP_032281350.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 41554 42030 . - . ID=gene-AC00_RS11855;Name=AC00_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11855;old_locus_tag=AC00_2670 NZ_JJLU01000085.1 Protein Homology CDS 41554 42030 . - 0 ID=cds-WP_032281352.1;Parent=gene-AC00_RS11855;Dbxref=GenBank:WP_032281352.1;Name=WP_032281352.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309649.1;locus_tag=AC00_RS11855;product=glycoside hydrolase family 24 protein;protein_id=WP_032281352.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 42014 42337 . - . ID=gene-AC00_RS11850;Name=AC00_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11850;old_locus_tag=AC00_2671 NZ_JJLU01000085.1 Protein Homology CDS 42014 42337 . - 0 ID=cds-WP_001570152.1;Parent=gene-AC00_RS11850;Dbxref=GenBank:WP_001570152.1;Name=WP_001570152.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966862.1;locus_tag=AC00_RS11850;product=phage holin%2C lambda family;protein_id=WP_001570152.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 42581 42656 . - . ID=gene-AC00_RS11845;Name=AC00_RS11845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11845;old_locus_tag=AC00_2672 NZ_JJLU01000085.1 tRNAscan-SE tRNA 42581 42656 . - . ID=rna-AC00_RS11845;Parent=gene-AC00_RS11845;anticodon=(pos:complement(42621..42623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11845;product=tRNA-Thr NZ_JJLU01000085.1 tRNAscan-SE exon 42581 42656 . - . ID=exon-AC00_RS11845-1;Parent=rna-AC00_RS11845;anticodon=(pos:complement(42621..42623));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11845;product=tRNA-Thr NZ_JJLU01000085.1 RefSeq gene 42662 42736 . - . ID=gene-AC00_RS11840;Name=AC00_RS11840;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11840;old_locus_tag=AC00_2673 NZ_JJLU01000085.1 tRNAscan-SE tRNA 42662 42736 . - . ID=rna-AC00_RS11840;Parent=gene-AC00_RS11840;anticodon=(pos:complement(42701..42703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11840;product=tRNA-Asn NZ_JJLU01000085.1 tRNAscan-SE exon 42662 42736 . - . ID=exon-AC00_RS11840-1;Parent=rna-AC00_RS11840;anticodon=(pos:complement(42701..42703));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11840;product=tRNA-Asn NZ_JJLU01000085.1 RefSeq gene 42791 43303 . - . ID=gene-AC00_RS0125060;Name=AC00_RS0125060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125060;old_locus_tag=AC00_2674 NZ_JJLU01000085.1 Protein Homology CDS 42791 43303 . - 0 ID=cds-WP_032281353.1;Parent=gene-AC00_RS0125060;Dbxref=GenBank:WP_032281353.1;Name=WP_032281353.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000658764.1;locus_tag=AC00_RS0125060;product=HNH endonuclease signature motif containing protein;protein_id=WP_032281353.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 43498 44016 . - . ID=gene-AC00_RS11835;Name=AC00_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11835;old_locus_tag=AC00_2675 NZ_JJLU01000085.1 Protein Homology CDS 43498 44016 . - 0 ID=cds-WP_015973887.1;Parent=gene-AC00_RS11835;Dbxref=GenBank:WP_015973887.1;Name=WP_015973887.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973887.1;locus_tag=AC00_RS11835;product=antiterminator Q family protein;protein_id=WP_015973887.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 44007 44678 . - . ID=gene-AC00_RS11830;Name=AC00_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11830;old_locus_tag=AC00_2676 NZ_JJLU01000085.1 Protein Homology CDS 44007 44678 . - 0 ID=cds-WP_032281354.1;Parent=gene-AC00_RS11830;Dbxref=GenBank:WP_032281354.1;Name=WP_032281354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716779.1;locus_tag=AC00_RS11830;product=serine/threonine protein phosphatase;protein_id=WP_032281354.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 44656 44862 . - . ID=gene-AC00_RS0125065;Name=AC00_RS0125065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125065 NZ_JJLU01000085.1 Protein Homology CDS 44656 44862 . - 0 ID=cds-WP_000144614.1;Parent=gene-AC00_RS0125065;Dbxref=GenBank:WP_000144614.1;Name=WP_000144614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001601990.1;locus_tag=AC00_RS0125065;product=phage NinH family protein;protein_id=WP_000144614.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 44859 45464 . - . ID=gene-AC00_RS11825;Name=AC00_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11825;old_locus_tag=AC00_2678 NZ_JJLU01000085.1 Protein Homology CDS 44859 45464 . - 0 ID=cds-WP_032178589.1;Parent=gene-AC00_RS11825;Dbxref=GenBank:WP_032178589.1;Name=WP_032178589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311004.1;locus_tag=AC00_RS11825;product=recombination protein NinG;protein_id=WP_032178589.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 45457 45627 . - . ID=gene-AC00_RS0125070;Name=AC00_RS0125070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125070 NZ_JJLU01000085.1 Protein Homology CDS 45457 45627 . - 0 ID=cds-WP_032281355.1;Parent=gene-AC00_RS0125070;Dbxref=GenBank:WP_032281355.1;Name=WP_032281355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000566997.1;locus_tag=AC00_RS0125070;product=protein NinF;protein_id=WP_032281355.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 45624 45806 . - . ID=gene-AC00_RS0125075;Name=AC00_RS0125075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125075 NZ_JJLU01000085.1 Protein Homology CDS 45624 45806 . - 0 ID=cds-WP_023155360.1;Parent=gene-AC00_RS0125075;Dbxref=GenBank:WP_023155360.1;Name=WP_023155360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063117.1;locus_tag=AC00_RS0125075;product=NinE family protein;protein_id=WP_023155360.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 45803 46330 . - . ID=gene-AC00_RS11820;Name=AC00_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11820;old_locus_tag=AC00_2679 NZ_JJLU01000085.1 Protein Homology CDS 45803 46330 . - 0 ID=cds-WP_000153270.1;Parent=gene-AC00_RS11820;Dbxref=GenBank:WP_000153270.1;Name=WP_000153270.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309223.1;locus_tag=AC00_RS11820;product=phage N-6-adenine-methyltransferase;protein_id=WP_000153270.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 46327 46767 . - . ID=gene-AC00_RS11815;Name=AC00_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11815;old_locus_tag=AC00_2680 NZ_JJLU01000085.1 Protein Homology CDS 46327 46767 . - 0 ID=cds-WP_021552628.1;Parent=gene-AC00_RS11815;Dbxref=GenBank:WP_021552628.1;Name=WP_021552628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513013.1;locus_tag=AC00_RS11815;product=recombination protein NinB;protein_id=WP_021552628.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 47044 48480 . - . ID=gene-AC00_RS11810;Name=AC00_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11810;old_locus_tag=AC00_2681 NZ_JJLU01000085.1 Protein Homology CDS 47044 48480 . - 0 ID=cds-WP_032281356.1;Parent=gene-AC00_RS11810;Dbxref=GenBank:WP_032281356.1;Name=WP_032281356.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309217.2;locus_tag=AC00_RS11810;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=WP_032281356.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 48470 49369 . - . ID=gene-AC00_RS11805;Name=AC00_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11805;old_locus_tag=AC00_2682 NZ_JJLU01000085.1 Protein Homology CDS 48470 49369 . - 0 ID=cds-WP_000065668.1;Parent=gene-AC00_RS11805;Dbxref=GenBank:WP_000065668.1;Name=WP_000065668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309216.1;locus_tag=AC00_RS11805;product=hypothetical protein;protein_id=WP_000065668.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 49362 49508 . - . ID=gene-AC00_RS11800;Name=AC00_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11800;old_locus_tag=AC00_2683 NZ_JJLU01000085.1 Protein Homology CDS 49362 49508 . - 0 ID=cds-WP_000166207.1;Parent=gene-AC00_RS11800;Dbxref=GenBank:WP_000166207.1;Name=WP_000166207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309215.1;locus_tag=AC00_RS11800;product=DUF2740 family protein;protein_id=WP_000166207.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 49541 49837 . - . ID=gene-AC00_RS11795;Name=AC00_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11795;old_locus_tag=AC00_2684 NZ_JJLU01000085.1 Protein Homology CDS 49541 49837 . - 0 ID=cds-WP_032281357.1;Parent=gene-AC00_RS11795;Dbxref=GenBank:WP_032281357.1;Name=WP_032281357.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311015.1;locus_tag=AC00_RS11795;product=CII family transcriptional regulator;protein_id=WP_032281357.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 49955 50173 . - . ID=gene-AC00_RS0125080;Name=AC00_RS0125080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125080 NZ_JJLU01000085.1 Protein Homology CDS 49955 50173 . - 0 ID=cds-WP_001033078.1;Parent=gene-AC00_RS0125080;Dbxref=GenBank:WP_001033078.1;Name=WP_001033078.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311016.1;locus_tag=AC00_RS0125080;product=helix-turn-helix transcriptional regulator;protein_id=WP_001033078.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 50282 50929 . + . ID=gene-AC00_RS0125085;Name=AC00_RS0125085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125085 NZ_JJLU01000085.1 Protein Homology CDS 50282 50929 . + 0 ID=cds-WP_001299796.1;Parent=gene-AC00_RS0125085;Dbxref=GenBank:WP_001299796.1;Name=WP_001299796.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311017.2;locus_tag=AC00_RS0125085;product=LexA family protein;protein_id=WP_001299796.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 50955 52001 . + . ID=gene-AC00_RS11790;Name=AC00_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11790;old_locus_tag=AC00_2685 NZ_JJLU01000085.1 Protein Homology CDS 50955 52001 . + 0 ID=cds-WP_001272876.1;Parent=gene-AC00_RS11790;Dbxref=GenBank:WP_001272876.1;Name=WP_001272876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272876.1;locus_tag=AC00_RS11790;product=hypothetical protein;protein_id=WP_001272876.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 52515 52820 . + . ID=gene-AC00_RS0125095;Name=AC00_RS0125095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125095 NZ_JJLU01000085.1 Protein Homology CDS 52515 52820 . + 0 ID=cds-WP_032281360.1;Parent=gene-AC00_RS0125095;Dbxref=GenBank:WP_032281360.1;Name=WP_032281360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256573.1;locus_tag=AC00_RS0125095;product=hypothetical protein;protein_id=WP_032281360.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 52940 53161 . + . ID=gene-AC00_RS0125100;Name=AC00_RS0125100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125100;old_locus_tag=AC00_2686 NZ_JJLU01000085.1 GeneMarkS-2+ CDS 52940 53161 . + 0 ID=cds-WP_233324796.1;Parent=gene-AC00_RS0125100;Dbxref=GenBank:WP_233324796.1;Name=WP_233324796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0125100;product=hypothetical protein;protein_id=WP_233324796.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 53350 53718 . + . ID=gene-AC00_RS11785;Name=AC00_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11785;old_locus_tag=AC00_2687 NZ_JJLU01000085.1 Protein Homology CDS 53350 53718 . + 0 ID=cds-WP_000065374.1;Parent=gene-AC00_RS11785;Dbxref=GenBank:WP_000065374.1;Name=WP_000065374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309206.1;locus_tag=AC00_RS11785;product=DUF2528 family protein;protein_id=WP_000065374.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 53794 53928 . + . ID=gene-AC00_RS30425;Name=AC00_RS30425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30425;old_locus_tag=AC00_2688 NZ_JJLU01000085.1 Protein Homology CDS 53794 53928 . + 0 ID=cds-WP_000972063.1;Parent=gene-AC00_RS30425;Dbxref=GenBank:WP_000972063.1;Name=WP_000972063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248931.1;locus_tag=AC00_RS30425;product=hypothetical protein;protein_id=WP_000972063.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 53913 54065 . + . ID=gene-AC00_RS11775;Name=kil;gbkey=Gene;gene=kil;gene_biotype=protein_coding;locus_tag=AC00_RS11775;old_locus_tag=AC00_2689 NZ_JJLU01000085.1 Protein Homology CDS 53913 54065 . + 0 ID=cds-WP_001243355.1;Parent=gene-AC00_RS11775;Dbxref=GenBank:WP_001243355.1;Name=WP_001243355.1;gbkey=CDS;gene=kil;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001243351.1;locus_tag=AC00_RS11775;product=host cell division inhibitory peptide Kil;protein_id=WP_001243355.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 54141 54311 . + . ID=gene-AC00_RS30925;Name=AC00_RS30925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30925;old_locus_tag=AC00_2690 NZ_JJLU01000085.1 GeneMarkS-2+ CDS 54141 54311 . + 0 ID=cds-WP_016248933.1;Parent=gene-AC00_RS30925;Dbxref=GenBank:WP_016248933.1;Name=WP_016248933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS30925;product=hypothetical protein;protein_id=WP_016248933.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 54320 55027 . + . ID=gene-AC00_RS11770;Name=AC00_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11770;old_locus_tag=AC00_2691 NZ_JJLU01000085.1 Protein Homology CDS 54320 55027 . + 0 ID=cds-WP_000365280.1;Parent=gene-AC00_RS11770;Dbxref=GenBank:WP_000365280.1;Name=WP_000365280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231971.1;locus_tag=AC00_RS11770;product=Rad52/Rad22 family DNA repair protein;protein_id=WP_000365280.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 55028 55495 . + . ID=gene-AC00_RS0125110;Name=AC00_RS0125110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125110 NZ_JJLU01000085.1 Protein Homology CDS 55028 55495 . + 0 ID=cds-WP_000018646.1;Parent=gene-AC00_RS0125110;Dbxref=GenBank:WP_000018646.1;Name=WP_000018646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018648.1;locus_tag=AC00_RS0125110;product=HNH endonuclease;protein_id=WP_000018646.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 55492 55998 . + . ID=gene-AC00_RS11765;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=AC00_RS11765;old_locus_tag=AC00_2692 NZ_JJLU01000085.1 Protein Homology CDS 55492 55998 . + 0 ID=cds-WP_000098523.1;Parent=gene-AC00_RS11765;Dbxref=GenBank:WP_000098523.1;Name=WP_000098523.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168270.1;locus_tag=AC00_RS11765;product=single-stranded DNA-binding protein;protein_id=WP_000098523.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 56012 56308 . + . ID=gene-AC00_RS0125115;Name=AC00_RS0125115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125115;old_locus_tag=AC00_2693 NZ_JJLU01000085.1 Protein Homology CDS 56012 56308 . + 0 ID=cds-WP_001111336.1;Parent=gene-AC00_RS0125115;Dbxref=GenBank:WP_001111336.1;Name=WP_001111336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001111277.1;locus_tag=AC00_RS0125115;product=phage anti-RecBCD protein;protein_id=WP_001111336.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 56319 56486 . + . ID=gene-AC00_RS11760;Name=AC00_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11760;old_locus_tag=AC00_2694 NZ_JJLU01000085.1 Protein Homology CDS 56319 56486 . + 0 ID=cds-WP_001214455.1;Parent=gene-AC00_RS11760;Dbxref=GenBank:WP_001214455.1;Name=WP_001214455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544363.1;locus_tag=AC00_RS11760;product=DUF2737 family protein;protein_id=WP_001214455.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 56483 57127 . + . ID=gene-AC00_RS11755;Name=AC00_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11755;old_locus_tag=AC00_2695 NZ_JJLU01000085.1 Protein Homology CDS 56483 57127 . + 0 ID=cds-WP_000184762.1;Parent=gene-AC00_RS11755;Dbxref=GenBank:WP_000184762.1;Name=WP_000184762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009450597.1;locus_tag=AC00_RS11755;product=hypothetical protein;protein_id=WP_000184762.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 57124 57777 . + . ID=gene-AC00_RS27940;Name=AC00_RS27940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27940;old_locus_tag=AC00_2696 NZ_JJLU01000085.1 Protein Homology CDS 57124 57777 . + 0 ID=cds-WP_112933314.1;Parent=gene-AC00_RS27940;Dbxref=GenBank:WP_112933314.1;Name=WP_112933314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001704596.1;locus_tag=AC00_RS27940;product=DUF551 domain-containing protein;protein_id=WP_112933314.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 57878 58045 . + . ID=gene-AC00_RS0125130;Name=AC00_RS0125130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125130 NZ_JJLU01000085.1 Protein Homology CDS 57878 58045 . + 0 ID=cds-WP_032281364.1;Parent=gene-AC00_RS0125130;Dbxref=GenBank:WP_032281364.1;Name=WP_032281364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308829.1;locus_tag=AC00_RS0125130;product=hypothetical protein;protein_id=WP_032281364.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 58103 58303 . + . ID=gene-AC00_RS11750;Name=torI;gbkey=Gene;gene=torI;gene_biotype=protein_coding;locus_tag=AC00_RS11750;old_locus_tag=AC00_2697 NZ_JJLU01000085.1 Protein Homology CDS 58103 58303 . + 0 ID=cds-WP_001163428.1;Parent=gene-AC00_RS11750;Dbxref=GenBank:WP_001163428.1;Name=WP_001163428.1;gbkey=CDS;gene=torI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588463.1;locus_tag=AC00_RS11750;product=response regulator inhibitor TorI;protein_id=WP_001163428.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 58487 59422 . - . ID=gene-AC00_RS11745;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=AC00_RS11745;old_locus_tag=AC00_2698 NZ_JJLU01000085.1 Protein Homology CDS 58487 59422 . - 0 ID=cds-WP_032281377.1;Parent=gene-AC00_RS11745;Dbxref=GenBank:WP_032281377.1;Name=WP_032281377.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416865.1;locus_tag=AC00_RS11745;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_032281377.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 59640 60977 . + . ID=gene-AC00_RS11740;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=AC00_RS11740;old_locus_tag=AC00_2699 NZ_JJLU01000085.1 Protein Homology CDS 59640 60977 . + 0 ID=cds-WP_032281365.1;Parent=gene-AC00_RS11740;Dbxref=GenBank:WP_032281365.1;Name=WP_032281365.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416866.1;locus_tag=AC00_RS11740;product=D-serine transporter DsdX;protein_id=WP_032281365.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 60995 62323 . + . ID=gene-AC00_RS11735;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=AC00_RS11735;old_locus_tag=AC00_2700 NZ_JJLU01000085.1 Protein Homology CDS 60995 62323 . + 0 ID=cds-WP_032281366.1;Parent=gene-AC00_RS11735;Dbxref=GenBank:WP_032281366.1;Name=WP_032281366.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416867.1;locus_tag=AC00_RS11735;product=D-serine ammonia-lyase;protein_id=WP_032281366.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 62431 63969 . - . ID=gene-AC00_RS11730;Name=emrY;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=AC00_RS11730;old_locus_tag=AC00_2701 NZ_JJLU01000085.1 Protein Homology CDS 62431 63969 . - 0 ID=cds-WP_001018714.1;Parent=gene-AC00_RS11730;Dbxref=GenBank:WP_001018714.1;Name=WP_001018714.1;gbkey=CDS;gene=emrY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416868.1;locus_tag=AC00_RS11730;product=multidrug efflux MFS transporter permease subunit EmrY;protein_id=WP_001018714.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 63969 65132 . - . ID=gene-AC00_RS11725;Name=emrK;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=AC00_RS11725;old_locus_tag=AC00_2702 NZ_JJLU01000085.1 Protein Homology CDS 63969 65132 . - 0 ID=cds-WP_032281367.1;Parent=gene-AC00_RS11725;Dbxref=GenBank:WP_032281367.1;Name=WP_032281367.1;gbkey=CDS;gene=emrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416869.1;locus_tag=AC00_RS11725;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrK;protein_id=WP_032281367.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 65547 66161 . + . ID=gene-AC00_RS11720;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=AC00_RS11720;old_locus_tag=AC00_2703 NZ_JJLU01000085.1 Protein Homology CDS 65547 66161 . + 0 ID=cds-WP_000991370.1;Parent=gene-AC00_RS11720;Dbxref=GenBank:WP_000991370.1;Name=WP_000991370.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311275.1;locus_tag=AC00_RS11720;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_000991370.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 66166 69759 . + . ID=gene-AC00_RS11715;Name=evgS;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=AC00_RS11715;old_locus_tag=AC00_2704 NZ_JJLU01000085.1 Protein Homology CDS 66166 69759 . + 0 ID=cds-WP_071999253.1;Parent=gene-AC00_RS11715;Dbxref=GenBank:WP_071999253.1;Name=WP_071999253.1;Ontology_term=GO:0010447,GO:0004673;gbkey=CDS;gene=evgS;go_function=protein histidine kinase activity|0004673||IEA;go_process=response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311276.1;locus_tag=AC00_RS11715;product=acid-sensing system histidine kinase EvgS;protein_id=WP_071999253.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 69815 70960 . - . ID=gene-AC00_RS11710;Name=yfdE;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=AC00_RS11710;old_locus_tag=AC00_2705 NZ_JJLU01000085.1 Protein Homology CDS 69815 70960 . - 0 ID=cds-WP_000183691.1;Parent=gene-AC00_RS11710;Dbxref=GenBank:WP_000183691.1;Name=WP_000183691.1;gbkey=CDS;gene=yfdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416872.4;locus_tag=AC00_RS11710;product=CoA:oxalate CoA-transferase;protein_id=WP_000183691.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 71034 71978 . - . ID=gene-AC00_RS11705;Name=yfdV;gbkey=Gene;gene=yfdV;gene_biotype=protein_coding;locus_tag=AC00_RS11705;old_locus_tag=AC00_2706 NZ_JJLU01000085.1 Protein Homology CDS 71034 71978 . - 0 ID=cds-WP_000955028.1;Parent=gene-AC00_RS11705;Dbxref=GenBank:WP_000955028.1;Name=WP_000955028.1;gbkey=CDS;gene=yfdV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311279.1;locus_tag=AC00_RS11705;product=transporter YfdV;protein_id=WP_000955028.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 72048 73742 . - . ID=gene-AC00_RS11700;Name=oxc;gbkey=Gene;gene=oxc;gene_biotype=protein_coding;locus_tag=AC00_RS11700;old_locus_tag=AC00_2707 NZ_JJLU01000085.1 Protein Homology CDS 72048 73742 . - 0 ID=cds-WP_001283479.1;Parent=gene-AC00_RS11700;Dbxref=GenBank:WP_001283479.1;Name=WP_001283479.1;Ontology_term=GO:0033611,GO:0000287,GO:0008949,GO:0030976;gbkey=CDS;gene=oxc;go_function=magnesium ion binding|0000287||IEA,oxalyl-CoA decarboxylase activity|0008949||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311280.1;locus_tag=AC00_RS11700;product=oxalyl-CoA decarboxylase;protein_id=WP_001283479.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 73796 75046 . - . ID=gene-AC00_RS11695;Name=frc;gbkey=Gene;gene=frc;gene_biotype=protein_coding;locus_tag=AC00_RS11695;old_locus_tag=AC00_2708 NZ_JJLU01000085.1 Protein Homology CDS 73796 75046 . - 0 ID=cds-WP_032281369.1;Parent=gene-AC00_RS11695;Dbxref=GenBank:WP_032281369.1;Name=WP_032281369.1;Ontology_term=GO:0033611,GO:0033608;gbkey=CDS;gene=frc;go_function=formyl-CoA transferase activity|0033608||IEA;go_process=oxalate catabolic process|0033611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416875.1;locus_tag=AC00_RS11695;product=formyl-CoA transferase;protein_id=WP_032281369.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 75559 76191 . - . ID=gene-AC00_RS11690;Name=yfdX;gbkey=Gene;gene=yfdX;gene_biotype=protein_coding;locus_tag=AC00_RS11690;old_locus_tag=AC00_2709 NZ_JJLU01000085.1 Protein Homology CDS 75559 76191 . - 0 ID=cds-WP_000825604.1;Parent=gene-AC00_RS11690;Dbxref=GenBank:WP_000825604.1;Name=WP_000825604.1;gbkey=CDS;gene=yfdX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708246.1;locus_tag=AC00_RS11690;product=YfdX family protein;protein_id=WP_000825604.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 76487 76762 . + . ID=gene-AC00_RS11685;Name=ypdI;gbkey=Gene;gene=ypdI;gene_biotype=protein_coding;locus_tag=AC00_RS11685;old_locus_tag=AC00_2711 NZ_JJLU01000085.1 Protein Homology CDS 76487 76762 . + 0 ID=cds-WP_000867658.1;Parent=gene-AC00_RS11685;Dbxref=GenBank:WP_000867658.1;Name=WP_000867658.1;gbkey=CDS;gene=ypdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416877.1;locus_tag=AC00_RS11685;product=colanic acid biosynthesis lipoprotein YpdI;protein_id=WP_000867658.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 76839 77081 . - . ID=gene-AC00_RS11680;Name=yfdY;gbkey=Gene;gene=yfdY;gene_biotype=protein_coding;locus_tag=AC00_RS11680;old_locus_tag=AC00_2712 NZ_JJLU01000085.1 Protein Homology CDS 76839 77081 . - 0 ID=cds-WP_000639883.1;Parent=gene-AC00_RS11680;Dbxref=GenBank:WP_000639883.1;Name=WP_000639883.1;gbkey=CDS;gene=yfdY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708247.1;locus_tag=AC00_RS11680;product=YfdY family protein;protein_id=WP_000639883.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 77434 78354 . + . ID=gene-AC00_RS11675;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=AC00_RS11675;old_locus_tag=AC00_2713 NZ_JJLU01000085.1 Protein Homology CDS 77434 78354 . + 0 ID=cds-WP_032281371.1;Parent=gene-AC00_RS11675;Dbxref=GenBank:WP_032281371.1;Name=WP_032281371.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=AC00_RS11675;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_032281371.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 78710 78781 . + . ID=gene-AC00_RS29670;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=AC00_RS29670 NZ_JJLU01000085.1 Protein Homology CDS 78710 78781 . + 0 ID=cds-WP_010723117.1;Parent=gene-AC00_RS29670;Dbxref=GenBank:WP_010723117.1;Name=WP_010723117.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=AC00_RS29670;product=membrane protein YpdK;protein_id=WP_010723117.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 78846 80084 . - . ID=gene-AC00_RS11670;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=AC00_RS11670;old_locus_tag=AC00_2715 NZ_JJLU01000085.1 Protein Homology CDS 78846 80084 . - 0 ID=cds-WP_000785931.1;Parent=gene-AC00_RS11670;Dbxref=GenBank:WP_000785931.1;Name=WP_000785931.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416880.1;locus_tag=AC00_RS11670;product=alanine transaminase;protein_id=WP_000785931.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 80461 82158 . + . ID=gene-AC00_RS11665;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=AC00_RS11665;old_locus_tag=AC00_2716 NZ_JJLU01000085.1 Protein Homology CDS 80461 82158 . + 0 ID=cds-WP_000544359.1;Parent=gene-AC00_RS11665;Dbxref=GenBank:WP_000544359.1;Name=WP_000544359.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311287.1;locus_tag=AC00_RS11665;product=two-component system sensor histidine kinase YpdA;protein_id=WP_000544359.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 82173 82907 . + . ID=gene-AC00_RS11660;Name=ypdB;gbkey=Gene;gene=ypdB;gene_biotype=protein_coding;locus_tag=AC00_RS11660;old_locus_tag=AC00_2717 NZ_JJLU01000085.1 Protein Homology CDS 82173 82907 . + 0 ID=cds-WP_001295458.1;Parent=gene-AC00_RS11660;Dbxref=GenBank:WP_001295458.1;Name=WP_001295458.1;gbkey=CDS;gene=ypdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=AC00_RS11660;product=two-component system response regulator YpdB;protein_id=WP_001295458.1;transl_table=11 NZ_JJLU01000085.1 RefSeq pseudogene 82920 83618 . + . ID=gene-AC00_RS11655;Name=AC00_RS11655;end_range=83618,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS11655;old_locus_tag=AC00_2718;partial=true;pseudo=true NZ_JJLU01000085.1 Protein Homology CDS 82920 83618 . + 0 ID=cds-AC00_RS11655;Parent=gene-AC00_RS11655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=83618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311289.1;locus_tag=AC00_RS11655;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 83745 84482 . - . ID=gene-AC00_RS11650;Name=AC00_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11650;old_locus_tag=AC00_2719 NZ_JJLU01000085.1 Protein Homology CDS 83745 84482 . - 0 ID=cds-WP_000528246.1;Parent=gene-AC00_RS11650;Dbxref=GenBank:WP_000528246.1;Name=WP_000528246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313025.1;locus_tag=AC00_RS11650;product=hypothetical protein;protein_id=WP_000528246.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 84436 84636 . - . ID=gene-AC00_RS0125140;Name=AC00_RS0125140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125140 NZ_JJLU01000085.1 Protein Homology CDS 84436 84636 . - 0 ID=cds-WP_014334043.1;Parent=gene-AC00_RS0125140;Dbxref=GenBank:WP_014334043.1;Name=WP_014334043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313024.1;locus_tag=AC00_RS0125140;product=Com family DNA-binding transcriptional regulator;protein_id=WP_014334043.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 84926 85186 . + . ID=gene-AC00_RS11645;Name=AC00_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11645;old_locus_tag=AC00_2720 NZ_JJLU01000085.1 Protein Homology CDS 84926 85186 . + 0 ID=cds-WP_000571916.1;Parent=gene-AC00_RS11645;Dbxref=GenBank:WP_000571916.1;Name=WP_000571916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000571916.1;locus_tag=AC00_RS11645;product=hypothetical protein;protein_id=WP_000571916.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 85354 85608 . - . ID=gene-AC00_RS11640;Name=AC00_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11640;old_locus_tag=AC00_2721 NZ_JJLU01000085.1 Protein Homology CDS 85354 85608 . - 0 ID=cds-WP_032236972.1;Parent=gene-AC00_RS11640;Dbxref=GenBank:WP_032236972.1;Name=WP_032236972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313022.1;locus_tag=AC00_RS11640;product=DUF826 domain-containing protein;protein_id=WP_032236972.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 85644 85826 . - . ID=gene-AC00_RS11635;Name=AC00_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11635;old_locus_tag=AC00_2722 NZ_JJLU01000085.1 Protein Homology CDS 85644 85826 . - 0 ID=cds-WP_032188762.1;Parent=gene-AC00_RS11635;Dbxref=GenBank:WP_032188762.1;Name=WP_032188762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908619.1;locus_tag=AC00_RS11635;product=DUF1378 family protein;protein_id=WP_032188762.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 85992 88046 . - . ID=gene-AC00_RS11630;Name=AC00_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11630;old_locus_tag=AC00_2723 NZ_JJLU01000085.1 Protein Homology CDS 85992 88046 . - 0 ID=cds-WP_001284083.1;Parent=gene-AC00_RS11630;Dbxref=GenBank:WP_001284083.1;Name=WP_001284083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284083.1;locus_tag=AC00_RS11630;product=DUF6645 domain-containing protein;protein_id=WP_001284083.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 88351 88872 . + . ID=gene-AC00_RS11625;Name=AC00_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11625;old_locus_tag=AC00_2724 NZ_JJLU01000085.1 Protein Homology CDS 88351 88872 . + 0 ID=cds-WP_032253543.1;Parent=gene-AC00_RS11625;Dbxref=GenBank:WP_032253543.1;Name=WP_032253543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000421093.1;locus_tag=AC00_RS11625;product=tail fiber assembly protein;protein_id=WP_032253543.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 88907 89818 . - . ID=gene-AC00_RS11620;Name=AC00_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11620;old_locus_tag=AC00_2725 NZ_JJLU01000085.1 Protein Homology CDS 88907 89818 . - 0 ID=cds-WP_032258834.1;Parent=gene-AC00_RS11620;Dbxref=GenBank:WP_032258834.1;Name=WP_032258834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313016.1;locus_tag=AC00_RS11620;product=hypothetical protein;protein_id=WP_032258834.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 89818 90378 . - . ID=gene-AC00_RS11615;Name=AC00_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11615;old_locus_tag=AC00_2726 NZ_JJLU01000085.1 Protein Homology CDS 89818 90378 . - 0 ID=cds-WP_000301581.1;Parent=gene-AC00_RS11615;Dbxref=GenBank:WP_000301581.1;Name=WP_000301581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313015.1;locus_tag=AC00_RS11615;product=YmfQ family protein;protein_id=WP_000301581.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 90369 91451 . - . ID=gene-AC00_RS11610;Name=AC00_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11610;old_locus_tag=AC00_2727 NZ_JJLU01000085.1 Protein Homology CDS 90369 91451 . - 0 ID=cds-WP_001146839.1;Parent=gene-AC00_RS11610;Dbxref=GenBank:WP_001146839.1;Name=WP_001146839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313014.2;locus_tag=AC00_RS11610;product=baseplate J/gp47 family protein;protein_id=WP_001146839.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 91451 91888 . - . ID=gene-AC00_RS11605;Name=AC00_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11605;old_locus_tag=AC00_2728 NZ_JJLU01000085.1 Protein Homology CDS 91451 91888 . - 0 ID=cds-WP_000763299.1;Parent=gene-AC00_RS11605;Dbxref=GenBank:WP_000763299.1;Name=WP_000763299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313013.1;locus_tag=AC00_RS11605;product=phage GP46 family protein;protein_id=WP_000763299.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 91881 92495 . - . ID=gene-AC00_RS11600;Name=AC00_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11600;old_locus_tag=AC00_2729 NZ_JJLU01000085.1 Protein Homology CDS 91881 92495 . - 0 ID=cds-WP_077124403.1;Parent=gene-AC00_RS11600;Dbxref=GenBank:WP_077124403.1;Name=WP_077124403.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313012.2;locus_tag=AC00_RS11600;product=phage baseplate assembly protein V;protein_id=WP_077124403.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 92485 93609 . - . ID=gene-AC00_RS11595;Name=AC00_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11595;old_locus_tag=AC00_2730 NZ_JJLU01000085.1 Protein Homology CDS 92485 93609 . - 0 ID=cds-WP_000098566.1;Parent=gene-AC00_RS11595;Dbxref=GenBank:WP_000098566.1;Name=WP_000098566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000098564.1;locus_tag=AC00_RS11595;product=phage baseplate assembly protein;protein_id=WP_000098566.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 93593 94951 . - . ID=gene-AC00_RS11590;Name=AC00_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11590;old_locus_tag=AC00_2731 NZ_JJLU01000085.1 Protein Homology CDS 93593 94951 . - 0 ID=cds-WP_032288250.1;Parent=gene-AC00_RS11590;Dbxref=GenBank:WP_032288250.1;Name=WP_032288250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000168763.1;locus_tag=AC00_RS11590;product=DNA circularization protein;protein_id=WP_032288250.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 94938 96995 . - . ID=gene-AC00_RS11585;Name=AC00_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11585;old_locus_tag=AC00_2732 NZ_JJLU01000085.1 Protein Homology CDS 94938 96995 . - 0 ID=cds-WP_032281311.1;Parent=gene-AC00_RS11585;Dbxref=GenBank:WP_032281311.1;Name=WP_032281311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313009.1;locus_tag=AC00_RS11585;product=tape measure protein;protein_id=WP_032281311.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 97123 97602 . - . ID=gene-AC00_RS11580;Name=AC00_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11580;old_locus_tag=AC00_2734 NZ_JJLU01000085.1 Protein Homology CDS 97123 97602 . - 0 ID=cds-WP_000213223.1;Parent=gene-AC00_RS11580;Dbxref=GenBank:WP_000213223.1;Name=WP_000213223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313008.1;locus_tag=AC00_RS11580;product=phage tail assembly protein;protein_id=WP_000213223.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 97617 97982 . - . ID=gene-AC00_RS11575;Name=AC00_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11575;old_locus_tag=AC00_2735 NZ_JJLU01000085.1 Protein Homology CDS 97617 97982 . - 0 ID=cds-WP_000015465.1;Parent=gene-AC00_RS11575;Dbxref=GenBank:WP_000015465.1;Name=WP_000015465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313007.1;locus_tag=AC00_RS11575;product=phage tail tube protein;protein_id=WP_000015465.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 97991 99493 . - . ID=gene-AC00_RS11570;Name=AC00_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11570;old_locus_tag=AC00_2736 NZ_JJLU01000085.1 Protein Homology CDS 97991 99493 . - 0 ID=cds-WP_000606777.1;Parent=gene-AC00_RS11570;Dbxref=GenBank:WP_000606777.1;Name=WP_000606777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313006.1;locus_tag=AC00_RS11570;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_000606777.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 99493 99771 . - . ID=gene-AC00_RS11565;Name=AC00_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11565;old_locus_tag=AC00_2737 NZ_JJLU01000085.1 Protein Homology CDS 99493 99771 . - 0 ID=cds-WP_000207439.1;Parent=gene-AC00_RS11565;Dbxref=GenBank:WP_000207439.1;Name=WP_000207439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000207437.1;locus_tag=AC00_RS11565;product=DUF2635 domain-containing protein;protein_id=WP_000207439.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 99775 100338 . - . ID=gene-AC00_RS11560;Name=AC00_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11560;old_locus_tag=AC00_2738 NZ_JJLU01000085.1 Protein Homology CDS 99775 100338 . - 0 ID=cds-WP_000627434.1;Parent=gene-AC00_RS11560;Dbxref=GenBank:WP_000627434.1;Name=WP_000627434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627434.1;locus_tag=AC00_RS11560;product=DUF1834 family protein;protein_id=WP_000627434.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 100335 100754 . - . ID=gene-AC00_RS11555;Name=AC00_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11555;old_locus_tag=AC00_2739 NZ_JJLU01000085.1 Protein Homology CDS 100335 100754 . - 0 ID=cds-WP_001104953.1;Parent=gene-AC00_RS11555;Dbxref=GenBank:WP_001104953.1;Name=WP_001104953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313003.1;locus_tag=AC00_RS11555;product=gp436 family protein;protein_id=WP_001104953.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 100751 101104 . - . ID=gene-AC00_RS11550;Name=AC00_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11550;old_locus_tag=AC00_2740 NZ_JJLU01000085.1 Protein Homology CDS 100751 101104 . - 0 ID=cds-WP_001002062.1;Parent=gene-AC00_RS11550;Dbxref=GenBank:WP_001002062.1;Name=WP_001002062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002039.1;locus_tag=AC00_RS11550;product=HI1506-related protein;protein_id=WP_001002062.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 101148 102095 . - . ID=gene-AC00_RS11545;Name=AC00_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11545;old_locus_tag=AC00_2741 NZ_JJLU01000085.1 Protein Homology CDS 101148 102095 . - 0 ID=cds-WP_001142987.1;Parent=gene-AC00_RS11545;Dbxref=GenBank:WP_001142987.1;Name=WP_001142987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313001.1;locus_tag=AC00_RS11545;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_001142987.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 102095 103219 . - . ID=gene-AC00_RS11540;Name=AC00_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11540;old_locus_tag=AC00_2742 NZ_JJLU01000085.1 Protein Homology CDS 102095 103219 . - 0 ID=cds-WP_000850814.1;Parent=gene-AC00_RS11540;Dbxref=GenBank:WP_000850814.1;Name=WP_000850814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313000.1;locus_tag=AC00_RS11540;product=phage protease;protein_id=WP_000850814.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 103397 103870 . - . ID=gene-AC00_RS11535;Name=AC00_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11535;old_locus_tag=AC00_2743 NZ_JJLU01000085.1 Protein Homology CDS 103397 103870 . - 0 ID=cds-WP_000094810.1;Parent=gene-AC00_RS11535;Dbxref=GenBank:WP_000094810.1;Name=WP_000094810.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312999.1;locus_tag=AC00_RS11535;product=phage virion morphogenesis protein;protein_id=WP_000094810.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 103911 103990 . + . ID=gene-AC00_RS30430;Name=AC00_RS30430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS30430 NZ_JJLU01000085.1 tRNAscan-SE tRNA 103911 103990 . + . ID=rna-AC00_RS30430;Parent=gene-AC00_RS30430;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS30430;product=tRNA-OTHER NZ_JJLU01000085.1 tRNAscan-SE exon 103911 103990 . + . ID=exon-AC00_RS30430-1;Parent=rna-AC00_RS30430;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS30430;product=tRNA-OTHER NZ_JJLU01000085.1 RefSeq gene 103992 105323 . - . ID=gene-AC00_RS11530;Name=AC00_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11530;old_locus_tag=AC00_2744 NZ_JJLU01000085.1 Protein Homology CDS 103992 105323 . - 0 ID=cds-WP_000191774.1;Parent=gene-AC00_RS11530;Dbxref=GenBank:WP_000191774.1;Name=WP_000191774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046899.1;locus_tag=AC00_RS11530;product=phage head morphogenesis protein;protein_id=WP_000191774.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 105307 106896 . - . ID=gene-AC00_RS11525;Name=AC00_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11525;old_locus_tag=AC00_2745 NZ_JJLU01000085.1 Protein Homology CDS 105307 106896 . - 0 ID=cds-WP_032281308.1;Parent=gene-AC00_RS11525;Dbxref=GenBank:WP_032281308.1;Name=WP_032281308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312997.2;locus_tag=AC00_RS11525;product=DUF935 domain-containing protein;protein_id=WP_032281308.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 106896 108560 . - . ID=gene-AC00_RS11520;Name=AC00_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11520;old_locus_tag=AC00_2746 NZ_JJLU01000085.1 Protein Homology CDS 106896 108560 . - 0 ID=cds-WP_001030249.1;Parent=gene-AC00_RS11520;Dbxref=GenBank:WP_001030249.1;Name=WP_001030249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312996.1;locus_tag=AC00_RS11520;product=hypothetical protein;protein_id=WP_001030249.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 108560 108808 . - . ID=gene-AC00_RS0125145;Name=AC00_RS0125145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125145 NZ_JJLU01000085.1 Protein Homology CDS 108560 108808 . - 0 ID=cds-WP_000255658.1;Parent=gene-AC00_RS0125145;Dbxref=GenBank:WP_000255658.1;Name=WP_000255658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000255658.1;locus_tag=AC00_RS0125145;product=hypothetical protein;protein_id=WP_000255658.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 108819 109400 . - . ID=gene-AC00_RS11515;Name=AC00_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11515;old_locus_tag=AC00_2748 NZ_JJLU01000085.1 Protein Homology CDS 108819 109400 . - 0 ID=cds-WP_000360580.1;Parent=gene-AC00_RS11515;Dbxref=GenBank:WP_000360580.1;Name=WP_000360580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312995.1;locus_tag=AC00_RS11515;product=phage protein Gp27 family protein;protein_id=WP_000360580.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 109403 109693 . - . ID=gene-AC00_RS11510;Name=AC00_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11510;old_locus_tag=AC00_2749 NZ_JJLU01000085.1 Protein Homology CDS 109403 109693 . - 0 ID=cds-WP_001279080.1;Parent=gene-AC00_RS11510;Dbxref=GenBank:WP_001279080.1;Name=WP_001279080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312994.1;locus_tag=AC00_RS11510;product=VpaChn25_0724 family phage protein;protein_id=WP_001279080.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 109686 109997 . - . ID=gene-AC00_RS11505;Name=AC00_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11505;old_locus_tag=AC00_2750 NZ_JJLU01000085.1 Protein Homology CDS 109686 109997 . - 0 ID=cds-WP_000270160.1;Parent=gene-AC00_RS11505;Dbxref=GenBank:WP_000270160.1;Name=WP_000270160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000264993.1;locus_tag=AC00_RS11505;product=DUF2730 family protein;protein_id=WP_000270160.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 109978 110205 . - . ID=gene-AC00_RS0125150;Name=AC00_RS0125150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125150 NZ_JJLU01000085.1 Protein Homology CDS 109978 110205 . - 0 ID=cds-WP_032230646.1;Parent=gene-AC00_RS0125150;Dbxref=GenBank:WP_032230646.1;Name=WP_032230646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312992.1;locus_tag=AC00_RS0125150;product=TraR/DksA family transcriptional regulator;protein_id=WP_032230646.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 110216 110434 . - . ID=gene-AC00_RS30435;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC00_RS30435;old_locus_tag=AC00_2751 NZ_JJLU01000085.1 Protein Homology CDS 110216 110434 . - 0 ID=cds-WP_032281307.1;Parent=gene-AC00_RS30435;Dbxref=GenBank:WP_032281307.1;Name=WP_032281307.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=AC00_RS30435;product=Rz1-like lysis system protein LysC;protein_id=WP_032281307.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 110418 110768 . - . ID=gene-AC00_RS30440;Name=AC00_RS30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30440;old_locus_tag=AC00_2752 NZ_JJLU01000085.1 Protein Homology CDS 110418 110768 . - 0 ID=cds-WP_014334045.1;Parent=gene-AC00_RS30440;Dbxref=GenBank:WP_014334045.1;Name=WP_014334045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014334045.1;locus_tag=AC00_RS30440;product=hypothetical protein;protein_id=WP_014334045.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 110881 111381 . - . ID=gene-AC00_RS11490;Name=AC00_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11490;old_locus_tag=AC00_2753 NZ_JJLU01000085.1 Protein Homology CDS 110881 111381 . - 0 ID=cds-WP_032281304.1;Parent=gene-AC00_RS11490;Dbxref=GenBank:WP_032281304.1;Name=WP_032281304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312989.1;locus_tag=AC00_RS11490;product=lysozyme;protein_id=WP_032281304.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 111453 111875 . - . ID=gene-AC00_RS11485;Name=AC00_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11485;old_locus_tag=AC00_2754 NZ_JJLU01000085.1 Protein Homology CDS 111453 111875 . - 0 ID=cds-WP_000852372.1;Parent=gene-AC00_RS11485;Dbxref=GenBank:WP_000852372.1;Name=WP_000852372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312988.1;locus_tag=AC00_RS11485;product=Mor transcription activator family protein;protein_id=WP_000852372.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 111946 112458 . - . ID=gene-AC00_RS11480;Name=AC00_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11480;old_locus_tag=AC00_2755 NZ_JJLU01000085.1 Protein Homology CDS 111946 112458 . - 0 ID=cds-WP_032281302.1;Parent=gene-AC00_RS11480;Dbxref=GenBank:WP_032281302.1;Name=WP_032281302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908593.1;locus_tag=AC00_RS11480;product=gp16 family protein;protein_id=WP_032281302.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 112523 112933 . + . ID=gene-AC00_RS11475;Name=AC00_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11475;old_locus_tag=AC00_2756 NZ_JJLU01000085.1 Protein Homology CDS 112523 112933 . + 0 ID=cds-WP_032281301.1;Parent=gene-AC00_RS11475;Dbxref=GenBank:WP_032281301.1;Name=WP_032281301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000687318.1;locus_tag=AC00_RS11475;product=DUF2513 domain-containing protein;protein_id=WP_032281301.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 112895 113203 . - . ID=gene-AC00_RS11470;Name=AC00_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11470;old_locus_tag=AC00_2757 NZ_JJLU01000085.1 Protein Homology CDS 112895 113203 . - 0 ID=cds-WP_032281300.1;Parent=gene-AC00_RS11470;Dbxref=GenBank:WP_032281300.1;Name=WP_032281300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000021233.1;locus_tag=AC00_RS11470;product=hypothetical protein;protein_id=WP_032281300.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 113219 113569 . - . ID=gene-AC00_RS11465;Name=AC00_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11465;old_locus_tag=AC00_2758 NZ_JJLU01000085.1 Protein Homology CDS 113219 113569 . - 0 ID=cds-WP_044789853.1;Parent=gene-AC00_RS11465;Dbxref=GenBank:WP_044789853.1;Name=WP_044789853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001401880.1;locus_tag=AC00_RS11465;product=hypothetical protein;protein_id=WP_044789853.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 113566 113895 . - . ID=gene-AC00_RS11460;Name=AC00_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11460;old_locus_tag=AC00_2759 NZ_JJLU01000085.1 Protein Homology CDS 113566 113895 . - 0 ID=cds-WP_000633434.1;Parent=gene-AC00_RS11460;Dbxref=GenBank:WP_000633434.1;Name=WP_000633434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633434.1;locus_tag=AC00_RS11460;product=hypothetical protein;protein_id=WP_000633434.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 113892 114443 . - . ID=gene-AC00_RS11455;Name=AC00_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11455;old_locus_tag=AC00_2760 NZ_JJLU01000085.1 Protein Homology CDS 113892 114443 . - 0 ID=cds-WP_032281299.1;Parent=gene-AC00_RS11455;Dbxref=GenBank:WP_032281299.1;Name=WP_032281299.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908588.1;locus_tag=AC00_RS11455;product=SANT/Myb-like DNA-binding domain-containing protein;protein_id=WP_032281299.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 114447 114962 . - . ID=gene-AC00_RS11450;Name=AC00_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11450;old_locus_tag=AC00_2761 NZ_JJLU01000085.1 Protein Homology CDS 114447 114962 . - 0 ID=cds-WP_000465564.1;Parent=gene-AC00_RS11450;Dbxref=GenBank:WP_000465564.1;Name=WP_000465564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312982.1;locus_tag=AC00_RS11450;product=hypothetical protein;protein_id=WP_000465564.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 114962 115495 . - . ID=gene-AC00_RS11445;Name=AC00_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11445;old_locus_tag=AC00_2762 NZ_JJLU01000085.1 Protein Homology CDS 114962 115495 . - 0 ID=cds-WP_000564272.1;Parent=gene-AC00_RS11445;Dbxref=GenBank:WP_000564272.1;Name=WP_000564272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312981.1;locus_tag=AC00_RS11445;product=hypothetical protein;protein_id=WP_000564272.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 115641 116171 . - . ID=gene-AC00_RS11440;Name=AC00_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11440;old_locus_tag=AC00_2763 NZ_JJLU01000085.1 Protein Homology CDS 115641 116171 . - 0 ID=cds-WP_001129558.1;Parent=gene-AC00_RS11440;Dbxref=GenBank:WP_001129558.1;Name=WP_001129558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312979.1;locus_tag=AC00_RS11440;product=host-nuclease inhibitor Gam family protein;protein_id=WP_001129558.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 116183 116476 . - . ID=gene-AC00_RS11435;Name=AC00_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11435;old_locus_tag=AC00_2764 NZ_JJLU01000085.1 Protein Homology CDS 116183 116476 . - 0 ID=cds-WP_000049310.1;Parent=gene-AC00_RS11435;Dbxref=GenBank:WP_000049310.1;Name=WP_000049310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312978.1;locus_tag=AC00_RS11435;product=hypothetical protein;protein_id=WP_000049310.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 116481 116753 . - . ID=gene-AC00_RS0125155;Name=AC00_RS0125155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125155 NZ_JJLU01000085.1 Protein Homology CDS 116481 116753 . - 0 ID=cds-WP_000049428.1;Parent=gene-AC00_RS0125155;Dbxref=GenBank:WP_000049428.1;Name=WP_000049428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312977.1;locus_tag=AC00_RS0125155;product=hypothetical protein;protein_id=WP_000049428.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 116750 117031 . - . ID=gene-AC00_RS11430;Name=AC00_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11430;old_locus_tag=AC00_2766 NZ_JJLU01000085.1 Protein Homology CDS 116750 117031 . - 0 ID=cds-WP_000739863.1;Parent=gene-AC00_RS11430;Dbxref=GenBank:WP_000739863.1;Name=WP_000739863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312976.1;locus_tag=AC00_RS11430;product=hypothetical protein;protein_id=WP_000739863.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 117033 117287 . - . ID=gene-AC00_RS11425;Name=AC00_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11425;old_locus_tag=AC00_2767 NZ_JJLU01000085.1 Protein Homology CDS 117033 117287 . - 0 ID=cds-WP_001057199.1;Parent=gene-AC00_RS11425;Dbxref=GenBank:WP_001057199.1;Name=WP_001057199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312975.1;locus_tag=AC00_RS11425;product=hypothetical protein;protein_id=WP_001057199.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 117300 117521 . - . ID=gene-AC00_RS11420;Name=AC00_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11420;old_locus_tag=AC00_2768 NZ_JJLU01000085.1 Protein Homology CDS 117300 117521 . - 0 ID=cds-WP_000257932.1;Parent=gene-AC00_RS11420;Dbxref=GenBank:WP_000257932.1;Name=WP_000257932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312974.1;locus_tag=AC00_RS11420;product=hypothetical protein;protein_id=WP_000257932.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 117524 118456 . - . ID=gene-AC00_RS11415;Name=AC00_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11415;old_locus_tag=AC00_2769 NZ_JJLU01000085.1 Protein Homology CDS 117524 118456 . - 0 ID=cds-WP_032281297.1;Parent=gene-AC00_RS11415;Dbxref=GenBank:WP_032281297.1;Name=WP_032281297.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312973.1;locus_tag=AC00_RS11415;product=AAA family ATPase;protein_id=WP_032281297.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 118539 120626 . - . ID=gene-AC00_RS11410;Name=AC00_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11410;old_locus_tag=AC00_2770 NZ_JJLU01000085.1 Protein Homology CDS 118539 120626 . - 0 ID=cds-WP_032281296.1;Parent=gene-AC00_RS11410;Dbxref=GenBank:WP_032281296.1;Name=WP_032281296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458317.1;locus_tag=AC00_RS11410;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_032281296.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 120629 120859 . - . ID=gene-AC00_RS0125160;Name=AC00_RS0125160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125160;old_locus_tag=AC00_2771 NZ_JJLU01000085.1 Protein Homology CDS 120629 120859 . - 0 ID=cds-WP_001575658.1;Parent=gene-AC00_RS0125160;Dbxref=GenBank:WP_001575658.1;Name=WP_001575658.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575658.1;locus_tag=AC00_RS0125160;product=helix-turn-helix domain-containing protein;protein_id=WP_001575658.1;transl_table=11 NZ_JJLU01000085.1 RefSeq gene 121044 121589 . + . ID=gene-AC00_RS11405;Name=AC00_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11405;old_locus_tag=AC00_2772 NZ_JJLU01000085.1 Protein Homology CDS 121044 121589 . + 0 ID=cds-WP_001041872.1-2;Parent=gene-AC00_RS11405;Dbxref=GenBank:WP_001041872.1;Name=WP_001041872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041872.1;locus_tag=AC00_RS11405;product=transcriptional regulator;protein_id=WP_001041872.1;transl_table=11 ##sequence-region NZ_JJLU01000086.1 1 14357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000086.1 RefSeq region 1 14357 . + . ID=NZ_JJLU01000086.1:1..14357;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000086.1 RefSeq gene 1 536 . + . ID=gene-AC00_RS11400;Name=AC00_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11400;old_locus_tag=AC00_2773;partial=true;start_range=.,1 NZ_JJLU01000086.1 Protein Homology CDS 1 536 . + 2 ID=cds-WP_032288252.1;Parent=gene-AC00_RS11400;Dbxref=GenBank:WP_032288252.1;Name=WP_032288252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001041872.1;locus_tag=AC00_RS11400;partial=true;product=transcriptional regulator;protein_id=WP_032288252.1;start_range=.,1;transl_table=11 NZ_JJLU01000086.1 RefSeq pseudogene 774 947 . + . ID=gene-AC00_RS27955;Name=AC00_RS27955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS27955;old_locus_tag=AC00_2774;partial=true;pseudo=true;start_range=.,774 NZ_JJLU01000086.1 Protein Homology CDS 774 947 . + 0 ID=cds-AC00_RS27955;Parent=gene-AC00_RS27955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311289.1;locus_tag=AC00_RS27955;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,774;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 950 3445 . - . ID=gene-AC00_RS11395;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC00_RS11395;old_locus_tag=AC00_2775 NZ_JJLU01000086.1 Protein Homology CDS 950 3445 . - 0 ID=cds-WP_032281380.1;Parent=gene-AC00_RS11395;Dbxref=GenBank:WP_032281380.1;Name=WP_032281380.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311290.1;locus_tag=AC00_RS11395;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032281380.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 3470 4507 . - . ID=gene-AC00_RS11390;Name=ypdE;gbkey=Gene;gene=ypdE;gene_biotype=protein_coding;locus_tag=AC00_RS11390;old_locus_tag=AC00_2776 NZ_JJLU01000086.1 Protein Homology CDS 3470 4507 . - 0 ID=cds-WP_000366023.1;Parent=gene-AC00_RS11390;Dbxref=GenBank:WP_000366023.1;Name=WP_000366023.1;gbkey=CDS;gene=ypdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311291.1;locus_tag=AC00_RS11390;product=aminopeptidase;protein_id=WP_000366023.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 4507 5592 . - . ID=gene-AC00_RS11385;Name=ypdF;gbkey=Gene;gene=ypdF;gene_biotype=protein_coding;locus_tag=AC00_RS11385;old_locus_tag=AC00_2777 NZ_JJLU01000086.1 Protein Homology CDS 4507 5592 . - 0 ID=cds-WP_032281381.1;Parent=gene-AC00_RS11385;Dbxref=GenBank:WP_032281381.1;Name=WP_032281381.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypdF;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311292.1;locus_tag=AC00_RS11385;product=aminopeptidase;protein_id=WP_032281381.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 5607 6854 . - . ID=gene-AC00_RS11380;Name=fryC;gbkey=Gene;gene=fryC;gene_biotype=protein_coding;locus_tag=AC00_RS11380;old_locus_tag=AC00_2778 NZ_JJLU01000086.1 Protein Homology CDS 5607 6854 . - 0 ID=cds-WP_000985340.1;Parent=gene-AC00_RS11380;Dbxref=GenBank:WP_000985340.1;Name=WP_000985340.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=fryC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311293.1;locus_tag=AC00_RS11380;product=PTS fructose transporter subunit IIC;protein_id=WP_000985340.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 6876 7202 . - . ID=gene-AC00_RS11375;Name=fryB;gbkey=Gene;gene=fryB;gene_biotype=protein_coding;locus_tag=AC00_RS11375;old_locus_tag=AC00_2779 NZ_JJLU01000086.1 Protein Homology CDS 6876 7202 . - 0 ID=cds-WP_000038456.1;Parent=gene-AC00_RS11375;Dbxref=GenBank:WP_000038456.1;Name=WP_000038456.1;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;gene=fryB;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311294.1;locus_tag=AC00_RS11375;product=PTS fructose transporter subunit IIB;protein_id=WP_000038456.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 7421 8386 . - . ID=gene-AC00_RS11370;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AC00_RS11370;old_locus_tag=AC00_2780 NZ_JJLU01000086.1 Protein Homology CDS 7421 8386 . - 0 ID=cds-WP_000170346.1;Parent=gene-AC00_RS11370;Dbxref=GenBank:WP_000170346.1;Name=WP_000170346.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311295.1;locus_tag=AC00_RS11370;product=glucokinase;protein_id=WP_000170346.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 8590 9846 . + . ID=gene-AC00_RS11365;Name=yfeO;gbkey=Gene;gene=yfeO;gene_biotype=protein_coding;locus_tag=AC00_RS11365;old_locus_tag=AC00_2781 NZ_JJLU01000086.1 Protein Homology CDS 8590 9846 . + 0 ID=cds-WP_032288253.1;Parent=gene-AC00_RS11365;Dbxref=GenBank:WP_032288253.1;Name=WP_032288253.1;Ontology_term=GO:0005247;gbkey=CDS;gene=yfeO;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311296.1;locus_tag=AC00_RS11365;product=ion channel protein;protein_id=WP_032288253.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 9961 10287 . + . ID=gene-AC00_RS11360;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=AC00_RS11360;old_locus_tag=AC00_2782 NZ_JJLU01000086.1 Protein Homology CDS 9961 10287 . + 0 ID=cds-WP_000490072.1;Parent=gene-AC00_RS11360;Dbxref=GenBank:WP_000490072.1;Name=WP_000490072.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311297.1;locus_tag=AC00_RS11360;product=DUF2502 domain-containing protein YpeC;protein_id=WP_000490072.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 10428 11666 . - . ID=gene-AC00_RS11355;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=AC00_RS11355;old_locus_tag=AC00_2784 NZ_JJLU01000086.1 Protein Homology CDS 10428 11666 . - 0 ID=cds-WP_024203087.1;Parent=gene-AC00_RS11355;Dbxref=GenBank:WP_024203087.1;Name=WP_024203087.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mntH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=AC00_RS11355;product=Nramp family divalent metal transporter;protein_id=WP_024203087.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 11647 11736 . - . ID=gene-AC00_RS31745;Name=AC00_RS31745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31745 NZ_JJLU01000086.1 Protein Homology CDS 11647 11736 . - 0 ID=cds-WP_420026590.1;Parent=gene-AC00_RS31745;Dbxref=GenBank:WP_420026590.1;Name=WP_420026590.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049535.1;locus_tag=AC00_RS31745;product=hypothetical protein;protein_id=WP_420026590.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 12002 13204 . + . ID=gene-AC00_RS11350;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=AC00_RS11350;old_locus_tag=AC00_2785 NZ_JJLU01000086.1 Protein Homology CDS 12002 13204 . + 0 ID=cds-WP_000376337.1;Parent=gene-AC00_RS11350;Dbxref=GenBank:WP_000376337.1;Name=WP_000376337.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416894.1;locus_tag=AC00_RS11350;product=nucleoside permease NupC;protein_id=WP_000376337.1;transl_table=11 NZ_JJLU01000086.1 RefSeq gene 13407 14357 . - . ID=gene-AC00_RS11345;Name=AC00_RS11345;end_range=14357,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11345;old_locus_tag=AC00_2786;partial=true NZ_JJLU01000086.1 Protein Homology CDS 13407 14357 . - 0 ID=cds-WP_012738266.1-4;Parent=gene-AC00_RS11345;Dbxref=GenBank:WP_012738266.1;Name=WP_012738266.1;Ontology_term=GO:0006313,GO:0004803;end_range=14357,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS11345;partial=true;product=IS4 family transposase;protein_id=WP_012738266.1;transl_table=11 ##sequence-region NZ_JJLU01000087.1 1 8285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000087.1 RefSeq region 1 8285 . + . ID=NZ_JJLU01000087.1:1..8285;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000087.1 RefSeq pseudogene 1 276 . - . ID=gene-AC00_RS11340;Name=AC00_RS11340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS11340;old_locus_tag=AC00_2787;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000087.1 Protein Homology CDS 1 276 . - 0 ID=cds-AC00_RS11340;Parent=gene-AC00_RS11340;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS11340;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000087.1 RefSeq gene 360 2549 . - . ID=gene-AC00_RS11335;Name=pdeA;gbkey=Gene;gene=pdeA;gene_biotype=protein_coding;locus_tag=AC00_RS11335;old_locus_tag=AC00_2788 NZ_JJLU01000087.1 Protein Homology CDS 360 2549 . - 0 ID=cds-WP_001364824.1;Parent=gene-AC00_RS11335;Dbxref=GenBank:WP_001364824.1;Name=WP_001364824.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;gene=pdeA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311300.1;locus_tag=AC00_RS11335;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_001364824.1;transl_table=11 NZ_JJLU01000087.1 RefSeq gene 2757 2832 . - . ID=gene-AC00_RS11330;Name=AC00_RS11330;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11330;old_locus_tag=AC00_2789 NZ_JJLU01000087.1 tRNAscan-SE tRNA 2757 2832 . - . ID=rna-AC00_RS11330;Parent=gene-AC00_RS11330;anticodon=(pos:complement(2797..2799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11330;product=tRNA-Ala NZ_JJLU01000087.1 tRNAscan-SE exon 2757 2832 . - . ID=exon-AC00_RS11330-1;Parent=rna-AC00_RS11330;anticodon=(pos:complement(2797..2799));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11330;product=tRNA-Ala NZ_JJLU01000087.1 RefSeq gene 2872 2947 . - . ID=gene-AC00_RS11325;Name=AC00_RS11325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11325;old_locus_tag=AC00_2790 NZ_JJLU01000087.1 tRNAscan-SE tRNA 2872 2947 . - . ID=rna-AC00_RS11325;Parent=gene-AC00_RS11325;anticodon=(pos:complement(2912..2914));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11325;product=tRNA-Ala NZ_JJLU01000087.1 tRNAscan-SE exon 2872 2947 . - . ID=exon-AC00_RS11325-1;Parent=rna-AC00_RS11325;anticodon=(pos:complement(2912..2914));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11325;product=tRNA-Ala NZ_JJLU01000087.1 RefSeq gene 2987 3062 . - . ID=gene-AC00_RS11320;Name=AC00_RS11320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11320;old_locus_tag=AC00_2791 NZ_JJLU01000087.1 tRNAscan-SE tRNA 2987 3062 . - . ID=rna-AC00_RS11320;Parent=gene-AC00_RS11320;anticodon=(pos:complement(3027..3029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11320;product=tRNA-Ala NZ_JJLU01000087.1 tRNAscan-SE exon 2987 3062 . - . ID=exon-AC00_RS11320-1;Parent=rna-AC00_RS11320;anticodon=(pos:complement(3027..3029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11320;product=tRNA-Ala NZ_JJLU01000087.1 RefSeq gene 3102 3177 . - . ID=gene-AC00_RS11315;Name=AC00_RS11315;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11315;old_locus_tag=AC00_2792 NZ_JJLU01000087.1 tRNAscan-SE tRNA 3102 3177 . - . ID=rna-AC00_RS11315;Parent=gene-AC00_RS11315;anticodon=(pos:complement(3142..3144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11315;product=tRNA-Ala NZ_JJLU01000087.1 tRNAscan-SE exon 3102 3177 . - . ID=exon-AC00_RS11315-1;Parent=rna-AC00_RS11315;anticodon=(pos:complement(3142..3144));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11315;product=tRNA-Ala NZ_JJLU01000087.1 RefSeq gene 3398 3757 . + . ID=gene-AC00_RS11310;Name=yfeC;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=AC00_RS11310;old_locus_tag=AC00_2793 NZ_JJLU01000087.1 Protein Homology CDS 3398 3757 . + 0 ID=cds-WP_148725564.1;Parent=gene-AC00_RS11310;Dbxref=GenBank:WP_148725564.1;Name=WP_148725564.1;gbkey=CDS;gene=yfeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311301.3;locus_tag=AC00_RS11310;product=YfeC-like transcriptional regulator;protein_id=WP_148725564.1;transl_table=11 NZ_JJLU01000087.1 RefSeq gene 3759 4151 . + . ID=gene-AC00_RS11305;Name=yfeD;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=AC00_RS11305;old_locus_tag=AC00_2794 NZ_JJLU01000087.1 Protein Homology CDS 3759 4151 . + 0 ID=cds-WP_000826499.1;Parent=gene-AC00_RS11305;Dbxref=GenBank:WP_000826499.1;Name=WP_000826499.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfeD;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416898.3;locus_tag=AC00_RS11305;product=MerR family transcriptional regulator;protein_id=WP_000826499.1;transl_table=11 NZ_JJLU01000087.1 RefSeq gene 4191 5399 . - . ID=gene-AC00_RS11300;Name=insQ;gbkey=Gene;gene=insQ;gene_biotype=protein_coding;locus_tag=AC00_RS11300;old_locus_tag=AC00_2795 NZ_JJLU01000087.1 Protein Homology CDS 4191 5399 . - 0 ID=cds-WP_071999256.1;Parent=gene-AC00_RS11300;Dbxref=GenBank:WP_071999256.1;Name=WP_071999256.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;gene=insQ;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=AC00_RS11300;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_071999256.1;transl_table=11 NZ_JJLU01000087.1 RefSeq pseudogene 5422 5832 . + . ID=gene-AC00_RS11295;Name=tnpA;end_range=5832,.;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=AC00_RS11295;old_locus_tag=AC00_2796;partial=true;pseudo=true NZ_JJLU01000087.1 Protein Homology CDS 5422 5832 . + 0 ID=cds-AC00_RS11295;Parent=gene-AC00_RS11295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=5832,.;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278583.1;locus_tag=AC00_RS11295;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000087.1 RefSeq gene 5950 7365 . - . ID=gene-AC00_RS11290;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AC00_RS11290;old_locus_tag=AC00_2797 NZ_JJLU01000087.1 Protein Homology CDS 5950 7365 . - 0 ID=cds-WP_000695640.1;Parent=gene-AC00_RS11290;Dbxref=GenBank:WP_000695640.1;Name=WP_000695640.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311305.1;locus_tag=AC00_RS11290;product=glutamate--tRNA ligase;protein_id=WP_000695640.1;transl_table=11 NZ_JJLU01000087.1 RefSeq gene 7624 7699 . + . ID=gene-AC00_RS11285;Name=AC00_RS11285;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11285;old_locus_tag=AC00_2799 NZ_JJLU01000087.1 tRNAscan-SE tRNA 7624 7699 . + . ID=rna-AC00_RS11285;Parent=gene-AC00_RS11285;anticodon=(pos:7657..7659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11285;product=tRNA-Val NZ_JJLU01000087.1 tRNAscan-SE exon 7624 7699 . + . ID=exon-AC00_RS11285-1;Parent=rna-AC00_RS11285;anticodon=(pos:7657..7659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11285;product=tRNA-Val NZ_JJLU01000087.1 RefSeq gene 7744 7819 . + . ID=gene-AC00_RS11280;Name=AC00_RS11280;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11280;old_locus_tag=AC00_2800 NZ_JJLU01000087.1 tRNAscan-SE tRNA 7744 7819 . + . ID=rna-AC00_RS11280;Parent=gene-AC00_RS11280;anticodon=(pos:7777..7779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11280;product=tRNA-Val NZ_JJLU01000087.1 tRNAscan-SE exon 7744 7819 . + . ID=exon-AC00_RS11280-1;Parent=rna-AC00_RS11280;anticodon=(pos:7777..7779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11280;product=tRNA-Val NZ_JJLU01000087.1 RefSeq gene 7864 7939 . + . ID=gene-AC00_RS11275;Name=AC00_RS11275;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11275;old_locus_tag=AC00_2801 NZ_JJLU01000087.1 tRNAscan-SE tRNA 7864 7939 . + . ID=rna-AC00_RS11275;Parent=gene-AC00_RS11275;anticodon=(pos:7897..7899);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11275;product=tRNA-Val NZ_JJLU01000087.1 tRNAscan-SE exon 7864 7939 . + . ID=exon-AC00_RS11275-1;Parent=rna-AC00_RS11275;anticodon=(pos:7897..7899);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11275;product=tRNA-Val NZ_JJLU01000087.1 RefSeq gene 7984 8059 . + . ID=gene-AC00_RS11270;Name=AC00_RS11270;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11270;old_locus_tag=AC00_2802 NZ_JJLU01000087.1 tRNAscan-SE tRNA 7984 8059 . + . ID=rna-AC00_RS11270;Parent=gene-AC00_RS11270;anticodon=(pos:8017..8019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11270;product=tRNA-Val NZ_JJLU01000087.1 tRNAscan-SE exon 7984 8059 . + . ID=exon-AC00_RS11270-1;Parent=rna-AC00_RS11270;anticodon=(pos:8017..8019);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11270;product=tRNA-Val NZ_JJLU01000087.1 RefSeq gene 8106 8181 . + . ID=gene-AC00_RS11265;Name=AC00_RS11265;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11265;old_locus_tag=AC00_2803 NZ_JJLU01000087.1 tRNAscan-SE tRNA 8106 8181 . + . ID=rna-AC00_RS11265;Parent=gene-AC00_RS11265;anticodon=(pos:8139..8141);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11265;product=tRNA-Val NZ_JJLU01000087.1 tRNAscan-SE exon 8106 8181 . + . ID=exon-AC00_RS11265-1;Parent=rna-AC00_RS11265;anticodon=(pos:8139..8141);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11265;product=tRNA-Val NZ_JJLU01000087.1 RefSeq gene 8186 8261 . + . ID=gene-AC00_RS11260;Name=AC00_RS11260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS11260;old_locus_tag=AC00_2804 NZ_JJLU01000087.1 tRNAscan-SE tRNA 8186 8261 . + . ID=rna-AC00_RS11260;Parent=gene-AC00_RS11260;anticodon=(pos:8219..8221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11260;product=tRNA-Lys NZ_JJLU01000087.1 tRNAscan-SE exon 8186 8261 . + . ID=exon-AC00_RS11260-1;Parent=rna-AC00_RS11260;anticodon=(pos:8219..8221);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS11260;product=tRNA-Lys ##sequence-region NZ_JJLU01000088.1 1 40472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000088.1 RefSeq region 1 40472 . + . ID=NZ_JJLU01000088.1:1..40472;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000088.1 RefSeq gene 186 527 . + . ID=gene-AC00_RS11255;Name=AC00_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11255;old_locus_tag=AC00_2806 NZ_JJLU01000088.1 Protein Homology CDS 186 527 . + 0 ID=cds-WP_000201414.1;Parent=gene-AC00_RS11255;Dbxref=GenBank:WP_000201414.1;Name=WP_000201414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311306.1;locus_tag=AC00_RS11255;product=FlxA-like family protein;protein_id=WP_000201414.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 518 1444 . - . ID=gene-AC00_RS11250;Name=AC00_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11250;old_locus_tag=AC00_2807 NZ_JJLU01000088.1 Protein Homology CDS 518 1444 . - 0 ID=cds-WP_032281388.1;Parent=gene-AC00_RS11250;Dbxref=GenBank:WP_032281388.1;Name=WP_032281388.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416904.1;locus_tag=AC00_RS11250;product=LysR family transcriptional regulator;protein_id=WP_032281388.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 1534 2532 . + . ID=gene-AC00_RS11245;Name=AC00_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11245;old_locus_tag=AC00_2808 NZ_JJLU01000088.1 Protein Homology CDS 1534 2532 . + 0 ID=cds-WP_000765605.1;Parent=gene-AC00_RS11245;Dbxref=GenBank:WP_000765605.1;Name=WP_000765605.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311309.1;locus_tag=AC00_RS11245;product=bile acid:sodium symporter family protein;protein_id=WP_000765605.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 2529 2747 . - . ID=gene-AC00_RS11240;Name=AC00_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11240;old_locus_tag=AC00_2809 NZ_JJLU01000088.1 Protein Homology CDS 2529 2747 . - 0 ID=cds-WP_000410201.1;Parent=gene-AC00_RS11240;Dbxref=GenBank:WP_000410201.1;Name=WP_000410201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588464.1;locus_tag=AC00_RS11240;product=DUF3820 family protein;protein_id=WP_000410201.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 2749 4764 . - . ID=gene-AC00_RS11235;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AC00_RS11235;old_locus_tag=AC00_2810 NZ_JJLU01000088.1 Protein Homology CDS 2749 4764 . - 0 ID=cds-WP_000443694.1;Parent=gene-AC00_RS11235;Dbxref=GenBank:WP_000443694.1;Name=WP_000443694.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311310.1;locus_tag=AC00_RS11235;product=NAD-dependent DNA ligase LigA;protein_id=WP_000443694.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 4835 5833 . - . ID=gene-AC00_RS11230;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=AC00_RS11230;old_locus_tag=AC00_2811 NZ_JJLU01000088.1 Protein Homology CDS 4835 5833 . - 0 ID=cds-WP_001299866.1;Parent=gene-AC00_RS11230;Dbxref=GenBank:WP_001299866.1;Name=WP_001299866.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311311.1;locus_tag=AC00_RS11230;product=cell division protein ZipA;protein_id=WP_001299866.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 6063 6824 . + . ID=gene-AC00_RS11225;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=AC00_RS11225;old_locus_tag=AC00_2812 NZ_JJLU01000088.1 Protein Homology CDS 6063 6824 . + 0 ID=cds-WP_000254839.1;Parent=gene-AC00_RS11225;Dbxref=GenBank:WP_000254839.1;Name=WP_000254839.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311312.1;locus_tag=AC00_RS11225;product=sulfate transporter CysZ;protein_id=WP_000254839.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 7009 7980 . + . ID=gene-AC00_RS11220;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=AC00_RS11220;old_locus_tag=AC00_2813 NZ_JJLU01000088.1 Protein Homology CDS 7009 7980 . + 0 ID=cds-WP_032281389.1;Parent=gene-AC00_RS11220;Dbxref=GenBank:WP_032281389.1;Name=WP_032281389.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=AC00_RS11220;product=cysteine synthase A;protein_id=WP_032281389.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 8364 8621 . + . ID=gene-AC00_RS11215;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=AC00_RS11215;old_locus_tag=AC00_2815 NZ_JJLU01000088.1 Protein Homology CDS 8364 8621 . + 0 ID=cds-WP_000487600.1;Parent=gene-AC00_RS11215;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=AC00_RS11215;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 8666 10393 . + . ID=gene-AC00_RS11210;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=AC00_RS11210;old_locus_tag=AC00_2816 NZ_JJLU01000088.1 Protein Homology CDS 8666 10393 . + 0 ID=cds-WP_000623136.1;Parent=gene-AC00_RS11210;Dbxref=GenBank:WP_000623136.1;Name=WP_000623136.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311315.1;locus_tag=AC00_RS11210;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_000623136.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 10434 10943 . + . ID=gene-AC00_RS11205;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=AC00_RS11205;old_locus_tag=AC00_2817 NZ_JJLU01000088.1 Protein Homology CDS 10434 10943 . + 0 ID=cds-WP_000522247.1;Parent=gene-AC00_RS11205;Dbxref=GenBank:WP_000522247.1;Name=WP_000522247.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=AC00_RS11205;product=PTS glucose transporter subunit IIA;protein_id=WP_000522247.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 10986 11837 . - . ID=gene-AC00_RS11200;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=AC00_RS11200;old_locus_tag=AC00_2818 NZ_JJLU01000088.1 Protein Homology CDS 10986 11837 . - 0 ID=cds-WP_000096669.1;Parent=gene-AC00_RS11200;Dbxref=GenBank:WP_000096669.1;Name=WP_000096669.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311317.1;locus_tag=AC00_RS11200;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_000096669.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 11942 12310 . + . ID=gene-AC00_RS11195;Name=AC00_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11195;old_locus_tag=AC00_2819 NZ_JJLU01000088.1 Protein Homology CDS 11942 12310 . + 0 ID=cds-WP_000719945.1;Parent=gene-AC00_RS11195;Dbxref=GenBank:WP_000719945.1;Name=WP_000719945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001592994.1;locus_tag=AC00_RS11195;product=YfeK family protein;protein_id=WP_000719945.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 12313 13224 . - . ID=gene-AC00_RS11190;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=AC00_RS11190;old_locus_tag=AC00_2820 NZ_JJLU01000088.1 Protein Homology CDS 12313 13224 . - 0 ID=cds-WP_032281390.1;Parent=gene-AC00_RS11190;Dbxref=GenBank:WP_032281390.1;Name=WP_032281390.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311319.1;locus_tag=AC00_RS11190;product=cysteine synthase B;protein_id=WP_032281390.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 13358 14455 . - . ID=gene-AC00_RS11185;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=AC00_RS11185;old_locus_tag=AC00_2821 NZ_JJLU01000088.1 Protein Homology CDS 13358 14455 . - 0 ID=cds-WP_000021036.1;Parent=gene-AC00_RS11185;Dbxref=GenBank:WP_000021036.1;Name=WP_000021036.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=AC00_RS11185;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_000021036.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 14445 15320 . - . ID=gene-AC00_RS11180;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=AC00_RS11180;old_locus_tag=AC00_2822 NZ_JJLU01000088.1 Protein Homology CDS 14445 15320 . - 0 ID=cds-WP_000852686.1;Parent=gene-AC00_RS11180;Dbxref=GenBank:WP_000852686.1;Name=WP_000852686.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026168.2;locus_tag=AC00_RS11180;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_000852686.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 15320 16153 . - . ID=gene-AC00_RS11175;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=AC00_RS11175;old_locus_tag=AC00_2823 NZ_JJLU01000088.1 Protein Homology CDS 15320 16153 . - 0 ID=cds-WP_000458420.1;Parent=gene-AC00_RS11175;Dbxref=GenBank:WP_000458420.1;Name=WP_000458420.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=AC00_RS11175;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_000458420.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 16153 17169 . - . ID=gene-AC00_RS11170;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=AC00_RS11170;old_locus_tag=AC00_2824 NZ_JJLU01000088.1 Protein Homology CDS 16153 17169 . - 0 ID=cds-WP_032281391.1;Parent=gene-AC00_RS11170;Dbxref=GenBank:WP_032281391.1;Name=WP_032281391.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708277.1;locus_tag=AC00_RS11170;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_032281391.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 17327 18118 . - . ID=gene-AC00_RS11165;Name=ucpA;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=AC00_RS11165;old_locus_tag=AC00_2825 NZ_JJLU01000088.1 Protein Homology CDS 17327 18118 . - 0 ID=cds-WP_000517428.1;Parent=gene-AC00_RS11165;Dbxref=GenBank:WP_000517428.1;Name=WP_000517428.1;gbkey=CDS;gene=ucpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311324.2;locus_tag=AC00_RS11165;product=SDR family oxidoreductase UcpA;protein_id=WP_000517428.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 18247 19104 . - . ID=gene-AC00_RS11160;Name=murR;gbkey=Gene;gene=murR;gene_biotype=protein_coding;locus_tag=AC00_RS11160;old_locus_tag=AC00_2826 NZ_JJLU01000088.1 Protein Homology CDS 18247 19104 . - 0 ID=cds-WP_032281392.1;Parent=gene-AC00_RS11160;Dbxref=GenBank:WP_032281392.1;Name=WP_032281392.1;gbkey=CDS;gene=murR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311325.1;locus_tag=AC00_RS11160;product=HTH-type transcriptional regulator MurR;protein_id=WP_032281392.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 19268 20164 . + . ID=gene-AC00_RS11155;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AC00_RS11155;old_locus_tag=AC00_2827 NZ_JJLU01000088.1 Protein Homology CDS 19268 20164 . + 0 ID=cds-WP_032281393.1;Parent=gene-AC00_RS11155;Dbxref=GenBank:WP_032281393.1;Name=WP_032281393.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416923.1;locus_tag=AC00_RS11155;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_032281393.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 20168 21592 . + . ID=gene-AC00_RS11150;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=AC00_RS11150;old_locus_tag=AC00_2828 NZ_JJLU01000088.1 Protein Homology CDS 20168 21592 . + 0 ID=cds-WP_001040450.1;Parent=gene-AC00_RS11150;Dbxref=GenBank:WP_001040450.1;Name=WP_001040450.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311327.1;locus_tag=AC00_RS11150;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_001040450.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 21597 22901 . + . ID=gene-AC00_RS11145;Name=pbp4b;gbkey=Gene;gene=pbp4b;gene_biotype=protein_coding;locus_tag=AC00_RS11145;old_locus_tag=AC00_2829 NZ_JJLU01000088.1 Protein Homology CDS 21597 22901 . + 0 ID=cds-WP_032281394.1;Parent=gene-AC00_RS11145;Dbxref=GenBank:WP_032281394.1;Name=WP_032281394.1;gbkey=CDS;gene=pbp4b;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311328.1;locus_tag=AC00_RS11145;product=penicillin binding protein PBP4B;protein_id=WP_032281394.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 22959 23858 . - . ID=gene-AC00_RS11140;Name=yfeX;gbkey=Gene;gene=yfeX;gene_biotype=protein_coding;locus_tag=AC00_RS11140;old_locus_tag=AC00_2830 NZ_JJLU01000088.1 Protein Homology CDS 22959 23858 . - 0 ID=cds-WP_000084590.1;Parent=gene-AC00_RS11140;Dbxref=GenBank:WP_000084590.1;Name=WP_000084590.1;gbkey=CDS;gene=yfeX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311329.2;locus_tag=AC00_RS11140;product=porphyrinogen peroxidase;protein_id=WP_000084590.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 23954 24529 . - . ID=gene-AC00_RS11135;Name=AC00_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11135;old_locus_tag=AC00_2831 NZ_JJLU01000088.1 Protein Homology CDS 23954 24529 . - 0 ID=cds-WP_000838945.1;Parent=gene-AC00_RS11135;Dbxref=GenBank:WP_000838945.1;Name=WP_000838945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311330.1;locus_tag=AC00_RS11135;product=RpoE-regulated lipoprotein;protein_id=WP_000838945.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 24590 25039 . - . ID=gene-AC00_RS11130;Name=AC00_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11130;old_locus_tag=AC00_2832 NZ_JJLU01000088.1 Protein Homology CDS 24590 25039 . - 0 ID=cds-WP_001313137.1;Parent=gene-AC00_RS11130;Dbxref=GenBank:WP_001313137.1;Name=WP_001313137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311331.2;locus_tag=AC00_RS11130;product=DUF2919 domain-containing protein;protein_id=WP_001313137.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 25026 25451 . - . ID=gene-AC00_RS11125;Name=AC00_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11125;old_locus_tag=AC00_2833 NZ_JJLU01000088.1 Protein Homology CDS 25026 25451 . - 0 ID=cds-WP_000406000.1;Parent=gene-AC00_RS11125;Dbxref=GenBank:WP_000406000.1;Name=WP_000406000.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=AC00_RS11125;product=GNAT family acetyltransferase;protein_id=WP_000406000.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 25665 26534 . + . ID=gene-AC00_RS11120;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=AC00_RS11120;old_locus_tag=AC00_2834 NZ_JJLU01000088.1 Protein Homology CDS 25665 26534 . + 0 ID=cds-WP_000102891.1;Parent=gene-AC00_RS11120;Dbxref=GenBank:WP_000102891.1;Name=WP_000102891.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311333.1;locus_tag=AC00_RS11120;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_000102891.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 26538 27437 . + . ID=gene-AC00_RS11115;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AC00_RS11115;old_locus_tag=AC00_2835 NZ_JJLU01000088.1 Protein Homology CDS 26538 27437 . + 0 ID=cds-WP_032281395.1;Parent=gene-AC00_RS11115;Dbxref=GenBank:WP_032281395.1;Name=WP_032281395.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416931.1;locus_tag=AC00_RS11115;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_032281395.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 27443 28495 . - . ID=gene-AC00_RS11110;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=AC00_RS11110;old_locus_tag=AC00_2836 NZ_JJLU01000088.1 Protein Homology CDS 27443 28495 . - 0 ID=cds-WP_032281396.1;Parent=gene-AC00_RS11110;Dbxref=GenBank:WP_032281396.1;Name=WP_032281396.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311335.1;locus_tag=AC00_RS11110;product=HTH-type transcriptional regulator EutR;protein_id=WP_032281396.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 28541 29038 . - . ID=gene-AC00_RS11105;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=AC00_RS11105;old_locus_tag=AC00_2837 NZ_JJLU01000088.1 Protein Homology CDS 28541 29038 . - 0 ID=cds-WP_032281397.1;Parent=gene-AC00_RS11105;Dbxref=GenBank:WP_032281397.1;Name=WP_032281397.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311336.2;locus_tag=AC00_RS11105;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_032281397.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 29051 29710 . - . ID=gene-AC00_RS11100;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=AC00_RS11100;old_locus_tag=AC00_2838 NZ_JJLU01000088.1 Protein Homology CDS 29051 29710 . - 0 ID=cds-WP_001111027.1;Parent=gene-AC00_RS11100;Dbxref=GenBank:WP_001111027.1;Name=WP_001111027.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311337.1;locus_tag=AC00_RS11100;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_001111027.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 29720 30607 . - . ID=gene-AC00_RS11095;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=AC00_RS11095;old_locus_tag=AC00_2839 NZ_JJLU01000088.1 Protein Homology CDS 29720 30607 . - 0 ID=cds-WP_000372367.1;Parent=gene-AC00_RS11095;Dbxref=GenBank:WP_000372367.1;Name=WP_000372367.1;gbkey=CDS;gene=eutC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416935.1;locus_tag=AC00_RS11095;product=ethanolamine ammonia-lyase subunit beta;protein_id=WP_000372367.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 30628 31989 . - . ID=gene-AC00_RS11090;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=AC00_RS11090;old_locus_tag=AC00_2840 NZ_JJLU01000088.1 Protein Homology CDS 30628 31989 . - 0 ID=cds-WP_032281398.1;Parent=gene-AC00_RS11090;Dbxref=GenBank:WP_032281398.1;Name=WP_032281398.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311339.1;locus_tag=AC00_RS11090;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_032281398.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 32177 33382 . + . ID=gene-AC00_RS11085;Name=AC00_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11085;old_locus_tag=AC00_2841 NZ_JJLU01000088.1 Protein Homology CDS 32177 33382 . + 0 ID=cds-WP_032281399.1;Parent=gene-AC00_RS11085;Dbxref=GenBank:WP_032281399.1;Name=WP_032281399.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235727.1;locus_tag=AC00_RS11085;product=tyrosine-type recombinase/integrase;protein_id=WP_032281399.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 33609 34376 . + . ID=gene-AC00_RS11080;Name=AC00_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11080;old_locus_tag=AC00_2842 NZ_JJLU01000088.1 Protein Homology CDS 33609 34376 . + 0 ID=cds-WP_032281400.1;Parent=gene-AC00_RS11080;Dbxref=GenBank:WP_032281400.1;Name=WP_032281400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231124.1;locus_tag=AC00_RS11080;product=hypothetical protein;protein_id=WP_032281400.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 35535 35804 . + . ID=gene-AC00_RS11070;Name=AC00_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11070;old_locus_tag=AC00_2846 NZ_JJLU01000088.1 Protein Homology CDS 35535 35804 . + 0 ID=cds-WP_001268866.1;Parent=gene-AC00_RS11070;Dbxref=GenBank:WP_001268866.1;Name=WP_001268866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001268866.1;locus_tag=AC00_RS11070;product=hypothetical protein;protein_id=WP_001268866.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 35912 36103 . + . ID=gene-AC00_RS0125170;Name=AC00_RS0125170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125170 NZ_JJLU01000088.1 Protein Homology CDS 35912 36103 . + 0 ID=cds-WP_032281402.1;Parent=gene-AC00_RS0125170;Dbxref=GenBank:WP_032281402.1;Name=WP_032281402.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231125.1;locus_tag=AC00_RS0125170;product=helix-turn-helix domain-containing protein;protein_id=WP_032281402.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 36180 36506 . + . ID=gene-AC00_RS11065;Name=AC00_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11065;old_locus_tag=AC00_2849 NZ_JJLU01000088.1 Protein Homology CDS 36180 36506 . + 0 ID=cds-WP_000692633.1;Parent=gene-AC00_RS11065;Dbxref=GenBank:WP_000692633.1;Name=WP_000692633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000692633.1;locus_tag=AC00_RS11065;product=hypothetical protein;protein_id=WP_000692633.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 36524 37066 . + . ID=gene-AC00_RS11060;Name=AC00_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11060;old_locus_tag=AC00_2850 NZ_JJLU01000088.1 GeneMarkS-2+ CDS 36524 37066 . + 0 ID=cds-WP_032281403.1;Parent=gene-AC00_RS11060;Dbxref=GenBank:WP_032281403.1;Name=WP_032281403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS11060;product=hypothetical protein;protein_id=WP_032281403.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 37205 37492 . + . ID=gene-AC00_RS11055;Name=AC00_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11055;old_locus_tag=AC00_2851 NZ_JJLU01000088.1 Protein Homology CDS 37205 37492 . + 0 ID=cds-WP_001373377.1;Parent=gene-AC00_RS11055;Dbxref=GenBank:WP_001373377.1;Name=WP_001373377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001373377.1;locus_tag=AC00_RS11055;product=hypothetical protein;protein_id=WP_001373377.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 37531 37761 . + . ID=gene-AC00_RS11050;Name=AC00_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11050;old_locus_tag=AC00_2852 NZ_JJLU01000088.1 Protein Homology CDS 37531 37761 . + 0 ID=cds-WP_000806590.1;Parent=gene-AC00_RS11050;Dbxref=GenBank:WP_000806590.1;Name=WP_000806590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000806590.1;locus_tag=AC00_RS11050;product=hypothetical protein;protein_id=WP_000806590.1;transl_table=11 NZ_JJLU01000088.1 RefSeq gene 38050 40146 . + . ID=gene-AC00_RS11045;Name=AC00_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11045;old_locus_tag=AC00_2853 NZ_JJLU01000088.1 Protein Homology CDS 38050 40146 . + 0 ID=cds-WP_248790354.1;Parent=gene-AC00_RS11045;Dbxref=GenBank:WP_248790354.1;Name=WP_248790354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016405.1;locus_tag=AC00_RS11045;product=hypothetical protein;protein_id=WP_248790354.1;transl_table=11 NZ_JJLU01000088.1 RefSeq pseudogene 40157 40472 . - . ID=gene-AC00_RS11040;Name=AC00_RS11040;end_range=40472,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS11040;old_locus_tag=AC00_2854;partial=true;pseudo=true NZ_JJLU01000088.1 Protein Homology CDS 40157 40472 . - 1 ID=cds-AC00_RS11040;Parent=gene-AC00_RS11040;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=40472,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS11040;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000089.1 1 26426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000089.1 RefSeq region 1 26426 . + . ID=NZ_JJLU01000089.1:1..26426;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000089.1 RefSeq gene 1 270 . - . ID=gene-AC00_RS11035;Name=AC00_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS11035;old_locus_tag=AC00_2855;partial=true;start_range=.,1 NZ_JJLU01000089.1 Protein Homology CDS 1 270 . - 0 ID=cds-WP_000179209.1-2;Parent=gene-AC00_RS11035;Dbxref=GenBank:WP_000179209.1;Name=WP_000179209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS11035;partial=true;product=IS1-like element transposase;protein_id=WP_000179209.1;start_range=.,1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 398 2677 . - . ID=gene-AC00_RS11030;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=AC00_RS11030;old_locus_tag=AC00_2856 NZ_JJLU01000089.1 Protein Homology CDS 398 2677 . - 0 ID=cds-WP_000342643.1;Parent=gene-AC00_RS11030;Dbxref=GenBank:WP_000342643.1;Name=WP_000342643.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311352.1;locus_tag=AC00_RS11030;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_000342643.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 2966 3916 . + . ID=gene-AC00_RS11025;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AC00_RS11025;old_locus_tag=AC00_2857 NZ_JJLU01000089.1 Protein Homology CDS 2966 3916 . + 0 ID=cds-WP_001003709.1;Parent=gene-AC00_RS11025;Dbxref=GenBank:WP_001003709.1;Name=WP_001003709.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311353.1;locus_tag=AC00_RS11025;product=transaldolase;protein_id=WP_001003709.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 3936 5939 . + . ID=gene-AC00_RS11020;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AC00_RS11020;old_locus_tag=AC00_2858 NZ_JJLU01000089.1 Protein Homology CDS 3936 5939 . + 0 ID=cds-WP_032281406.1;Parent=gene-AC00_RS11020;Dbxref=GenBank:WP_032281406.1;Name=WP_032281406.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416960.1;locus_tag=AC00_RS11020;product=transketolase;protein_id=WP_032281406.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 6034 7077 . - . ID=gene-AC00_RS11015;Name=ypfG;gbkey=Gene;gene=ypfG;gene_biotype=protein_coding;locus_tag=AC00_RS11015;old_locus_tag=AC00_2859 NZ_JJLU01000089.1 Protein Homology CDS 6034 7077 . - 0 ID=cds-WP_001270524.1;Parent=gene-AC00_RS11015;Dbxref=GenBank:WP_001270524.1;Name=WP_001270524.1;gbkey=CDS;gene=ypfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311355.1;locus_tag=AC00_RS11015;product=DUF1176 domain-containing protein;protein_id=WP_001270524.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 7203 7778 . - . ID=gene-AC00_RS11010;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=AC00_RS11010;old_locus_tag=AC00_2860 NZ_JJLU01000089.1 Protein Homology CDS 7203 7778 . - 0 ID=cds-WP_032281407.1;Parent=gene-AC00_RS11010;Dbxref=GenBank:WP_032281407.1;Name=WP_032281407.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311356.1;locus_tag=AC00_RS11010;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_032281407.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 7846 9825 . - . ID=gene-AC00_RS11005;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=AC00_RS11005;old_locus_tag=AC00_2861 NZ_JJLU01000089.1 Protein Homology CDS 7846 9825 . - 0 ID=cds-WP_032281408.1;Parent=gene-AC00_RS11005;Dbxref=GenBank:WP_032281408.1;Name=WP_032281408.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311357.1;locus_tag=AC00_RS11005;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_032281408.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 10031 11731 . + . ID=gene-AC00_RS11000;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=AC00_RS11000;old_locus_tag=AC00_2862 NZ_JJLU01000089.1 Protein Homology CDS 10031 11731 . + 0 ID=cds-WP_001307936.1;Parent=gene-AC00_RS11000;Dbxref=GenBank:WP_001307936.1;Name=WP_001307936.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416964.1;locus_tag=AC00_RS11000;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_001307936.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 11895 15008 . + . ID=gene-AC00_RS10995;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=AC00_RS10995;old_locus_tag=AC00_2863 NZ_JJLU01000089.1 Protein Homology CDS 11895 15008 . + 0 ID=cds-WP_001273136.1;Parent=gene-AC00_RS10995;Dbxref=GenBank:WP_001273136.1;Name=WP_001273136.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=AC00_RS10995;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_001273136.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 15117 15176 . - . ID=gene-AC00_RS29685;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=AC00_RS29685 NZ_JJLU01000089.1 Protein Homology CDS 15117 15176 . - 0 ID=cds-WP_001386977.1;Parent=gene-AC00_RS29685;Dbxref=GenBank:WP_001386977.1;Name=WP_001386977.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=AC00_RS29685;product=protein YpfM;protein_id=WP_001386977.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 15557 15913 . + . ID=gene-AC00_RS10990;Name=yffB;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=AC00_RS10990;old_locus_tag=AC00_2865 NZ_JJLU01000089.1 Protein Homology CDS 15557 15913 . + 0 ID=cds-WP_000258247.1;Parent=gene-AC00_RS10990;Dbxref=GenBank:WP_000258247.1;Name=WP_000258247.1;gbkey=CDS;gene=yffB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708309.1;locus_tag=AC00_RS10990;product=ArsC family reductase;protein_id=WP_000258247.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 15917 17044 . + . ID=gene-AC00_RS10985;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=AC00_RS10985;old_locus_tag=AC00_2866 NZ_JJLU01000089.1 Protein Homology CDS 15917 17044 . + 0 ID=cds-WP_001277801.1;Parent=gene-AC00_RS10985;Dbxref=GenBank:WP_001277801.1;Name=WP_001277801.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=AC00_RS10985;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_001277801.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 17072 17272 . + . ID=gene-AC00_RS10980;Name=ypfN;gbkey=Gene;gene=ypfN;gene_biotype=protein_coding;locus_tag=AC00_RS10980;old_locus_tag=AC00_2867 NZ_JJLU01000089.1 Protein Homology CDS 17072 17272 . + 0 ID=cds-WP_000383836.1;Parent=gene-AC00_RS10980;Dbxref=GenBank:WP_000383836.1;Name=WP_000383836.1;gbkey=CDS;gene=ypfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588465.1;locus_tag=AC00_RS10980;product=YpfN family protein;protein_id=WP_000383836.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 17353 18051 . - . ID=gene-AC00_RS10975;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=AC00_RS10975;old_locus_tag=AC00_2868 NZ_JJLU01000089.1 Protein Homology CDS 17353 18051 . - 0 ID=cds-WP_000679804.1;Parent=gene-AC00_RS10975;Dbxref=GenBank:WP_000679804.1;Name=WP_000679804.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311362.2;locus_tag=AC00_RS10975;product=esterase;protein_id=WP_000679804.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 18125 20140 . - . ID=gene-AC00_RS10970;Name=tmcA;gbkey=Gene;gene=tmcA;gene_biotype=protein_coding;locus_tag=AC00_RS10970;old_locus_tag=AC00_2869 NZ_JJLU01000089.1 Protein Homology CDS 18125 20140 . - 0 ID=cds-WP_032281409.1;Parent=gene-AC00_RS10970;Dbxref=GenBank:WP_032281409.1;Name=WP_032281409.1;gbkey=CDS;gene=tmcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311363.1;locus_tag=AC00_RS10970;product=tRNA cytosine(34) acetyltransferase TmcA;protein_id=WP_032281409.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 20155 21018 . - . ID=gene-AC00_RS10965;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=AC00_RS10965;old_locus_tag=AC00_2870 NZ_JJLU01000089.1 Protein Homology CDS 20155 21018 . - 0 ID=cds-WP_032281410.1;Parent=gene-AC00_RS10965;Dbxref=GenBank:WP_032281410.1;Name=WP_032281410.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=AC00_RS10965;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_032281410.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 21186 21899 . - . ID=gene-AC00_RS10960;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=AC00_RS10960;old_locus_tag=AC00_2871 NZ_JJLU01000089.1 Protein Homology CDS 21186 21899 . - 0 ID=cds-WP_001295467.1;Parent=gene-AC00_RS10960;Dbxref=GenBank:WP_001295467.1;Name=WP_001295467.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=AC00_RS10960;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001295467.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 22112 23146 . - . ID=gene-AC00_RS10955;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=AC00_RS10955;old_locus_tag=AC00_2872 NZ_JJLU01000089.1 Protein Homology CDS 22112 23146 . - 0 ID=cds-WP_001297320.1;Parent=gene-AC00_RS10955;Dbxref=GenBank:WP_001297320.1;Name=WP_001297320.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=AC00_RS10955;product=outer membrane protein assembly factor BamC;protein_id=WP_001297320.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 23163 24041 . - . ID=gene-AC00_RS10950;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=AC00_RS10950;old_locus_tag=AC00_2873 NZ_JJLU01000089.1 Protein Homology CDS 23163 24041 . - 0 ID=cds-WP_001295469.1;Parent=gene-AC00_RS10950;Dbxref=GenBank:WP_001295469.1;Name=WP_001295469.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=AC00_RS10950;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_001295469.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 24187 24759 . + . ID=gene-AC00_RS10945;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=AC00_RS10945;old_locus_tag=AC00_2874 NZ_JJLU01000089.1 Protein Homology CDS 24187 24759 . + 0 ID=cds-WP_000176187.1;Parent=gene-AC00_RS10945;Dbxref=GenBank:WP_000176187.1;Name=WP_000176187.1;gbkey=CDS;gene=gcvR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=AC00_RS10945;product=glycine cleavage system transcriptional repressor;protein_id=WP_000176187.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 24759 25229 . + . ID=gene-AC00_RS10940;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=AC00_RS10940;old_locus_tag=AC00_2875 NZ_JJLU01000089.1 Protein Homology CDS 24759 25229 . + 0 ID=cds-WP_001068682.1;Parent=gene-AC00_RS10940;Dbxref=GenBank:WP_001068682.1;Name=WP_001068682.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=AC00_RS10940;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001068682.1;transl_table=11 NZ_JJLU01000089.1 RefSeq gene 25482 26084 . + . ID=gene-AC00_RS10935;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=AC00_RS10935;old_locus_tag=AC00_2876 NZ_JJLU01000089.1 Protein Homology CDS 25482 26084 . + 0 ID=cds-WP_032281411.1;Parent=gene-AC00_RS10935;Dbxref=GenBank:WP_032281411.1;Name=WP_032281411.1;gbkey=CDS;gene=hyfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300787.1;locus_tag=AC00_RS10935;product=hydrogenase 4 subunit HyfA;protein_id=WP_032281411.1;transl_table=11 NZ_JJLU01000089.1 RefSeq pseudogene 26244 26426 . - . ID=gene-AC00_RS10930;Name=AC00_RS10930;end_range=26426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS10930;old_locus_tag=AC00_2877;partial=true;pseudo=true NZ_JJLU01000089.1 Protein Homology CDS 26244 26426 . - 0 ID=cds-AC00_RS10930;Parent=gene-AC00_RS10930;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26426,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS10930;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000090.1 1 110287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000090.1 RefSeq region 1 110287 . + . ID=NZ_JJLU01000090.1:1..110287;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000090.1 RefSeq gene 56 1168 . - . ID=gene-AC00_RS10925;Name=AC00_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10925;old_locus_tag=AC00_2878 NZ_JJLU01000090.1 Protein Homology CDS 56 1168 . - 0 ID=cds-WP_001300563.1-3;Parent=gene-AC00_RS10925;Dbxref=GenBank:WP_001300563.1;Name=WP_001300563.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS10925;product=IS4-like element IS421 family transposase;protein_id=WP_001300563.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 1260 3278 . + . ID=gene-AC00_RS10920;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=AC00_RS10920;old_locus_tag=AC00_2879 NZ_JJLU01000090.1 Protein Homology CDS 1260 3278 . + 0 ID=cds-WP_032281413.1;Parent=gene-AC00_RS10920;Dbxref=GenBank:WP_032281413.1;Name=WP_032281413.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311371.1;locus_tag=AC00_RS10920;product=hydrogenase 4 subunit B;protein_id=WP_032281413.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 3289 4236 . + . ID=gene-AC00_RS10915;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=AC00_RS10915;old_locus_tag=AC00_2880 NZ_JJLU01000090.1 Protein Homology CDS 3289 4236 . + 0 ID=cds-WP_032281414.1;Parent=gene-AC00_RS10915;Dbxref=GenBank:WP_032281414.1;Name=WP_032281414.1;gbkey=CDS;gene=hyfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708321.1;locus_tag=AC00_RS10915;product=hydrogenase 4 subunit HyfC;protein_id=WP_032281414.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 4253 5692 . + . ID=gene-AC00_RS10910;Name=hyfD;gbkey=Gene;gene=hyfD;gene_biotype=protein_coding;locus_tag=AC00_RS10910;old_locus_tag=AC00_2881 NZ_JJLU01000090.1 Protein Homology CDS 4253 5692 . + 0 ID=cds-WP_032288254.1;Parent=gene-AC00_RS10910;Dbxref=GenBank:WP_032288254.1;Name=WP_032288254.1;gbkey=CDS;gene=hyfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416979.1;locus_tag=AC00_RS10910;product=hydrogenase 4 subunit HyfD;protein_id=WP_032288254.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 5704 6354 . + . ID=gene-AC00_RS10905;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AC00_RS10905;old_locus_tag=AC00_2882 NZ_JJLU01000090.1 Protein Homology CDS 5704 6354 . + 0 ID=cds-WP_000147999.1;Parent=gene-AC00_RS10905;Dbxref=GenBank:WP_000147999.1;Name=WP_000147999.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311374.1;locus_tag=AC00_RS10905;product=hydrogenase 4 membrane subunit;protein_id=WP_000147999.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 6359 7939 . + . ID=gene-AC00_RS10900;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=AC00_RS10900;old_locus_tag=AC00_2883 NZ_JJLU01000090.1 Protein Homology CDS 6359 7939 . + 0 ID=cds-WP_032288255.1;Parent=gene-AC00_RS10900;Dbxref=GenBank:WP_032288255.1;Name=WP_032288255.1;gbkey=CDS;gene=hyfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708324.1;locus_tag=AC00_RS10900;product=hydrogenase 4 subunit F;protein_id=WP_032288255.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 7929 9644 . + . ID=gene-AC00_RS10895;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=AC00_RS10895;old_locus_tag=AC00_2884 NZ_JJLU01000090.1 Protein Homology CDS 7929 9644 . + 0 ID=cds-WP_032281417.1;Parent=gene-AC00_RS10895;Dbxref=GenBank:WP_032281417.1;Name=WP_032281417.1;gbkey=CDS;gene=hyfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416982.1;locus_tag=AC00_RS10895;product=hydrogenase 4 catalytic subunit HyfG;protein_id=WP_032281417.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 9654 10199 . + . ID=gene-AC00_RS10890;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=AC00_RS10890;old_locus_tag=AC00_2885 NZ_JJLU01000090.1 Protein Homology CDS 9654 10199 . + 0 ID=cds-WP_000916058.1;Parent=gene-AC00_RS10890;Dbxref=GenBank:WP_000916058.1;Name=WP_000916058.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311377.1;locus_tag=AC00_RS10890;product=hydrogenase 4 subunit H;protein_id=WP_000916058.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 10196 10954 . + . ID=gene-AC00_RS10885;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=AC00_RS10885;old_locus_tag=AC00_2886 NZ_JJLU01000090.1 Protein Homology CDS 10196 10954 . + 0 ID=cds-WP_032281418.1;Parent=gene-AC00_RS10885;Dbxref=GenBank:WP_032281418.1;Name=WP_032281418.1;gbkey=CDS;gene=hyfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416984.1;locus_tag=AC00_RS10885;product=hydrogenase 4 catalytic subunit HyfI;protein_id=WP_032281418.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 10947 11360 . + . ID=gene-AC00_RS10880;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=AC00_RS10880;old_locus_tag=AC00_2887 NZ_JJLU01000090.1 Protein Homology CDS 10947 11360 . + 0 ID=cds-WP_032288257.1;Parent=gene-AC00_RS10880;Dbxref=GenBank:WP_032288257.1;Name=WP_032288257.1;gbkey=CDS;gene=hyfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416985.4;locus_tag=AC00_RS10880;product=hydrogenase 4 assembly chaperone HyfJ;protein_id=WP_032288257.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 11390 13402 . + . ID=gene-AC00_RS10875;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=AC00_RS10875;old_locus_tag=AC00_2888 NZ_JJLU01000090.1 Protein Homology CDS 11390 13402 . + 0 ID=cds-WP_032281420.1;Parent=gene-AC00_RS10875;Dbxref=GenBank:WP_032281420.1;Name=WP_032281420.1;gbkey=CDS;gene=hyfR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311380.2;locus_tag=AC00_RS10875;product=DNA-binding transcriptional regulator HyfR;protein_id=WP_032281420.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 13424 14272 . + . ID=gene-AC00_RS10870;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=AC00_RS10870;old_locus_tag=AC00_2889 NZ_JJLU01000090.1 Protein Homology CDS 13424 14272 . + 0 ID=cds-WP_021557077.1;Parent=gene-AC00_RS10870;Dbxref=GenBank:WP_021557077.1;Name=WP_021557077.1;gbkey=CDS;gene=focB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311381.1;locus_tag=AC00_RS10870;product=formate transporter FocB;protein_id=WP_021557077.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 14310 15371 . - . ID=gene-AC00_RS10865;Name=yfgO;gbkey=Gene;gene=yfgO;gene_biotype=protein_coding;locus_tag=AC00_RS10865;old_locus_tag=AC00_2890 NZ_JJLU01000090.1 Protein Homology CDS 14310 15371 . - 0 ID=cds-WP_000892044.1;Parent=gene-AC00_RS10865;Dbxref=GenBank:WP_000892044.1;Name=WP_000892044.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yfgO;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311382.1;locus_tag=AC00_RS10865;product=AI-2E family transporter;protein_id=WP_000892044.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 15584 17047 . + . ID=gene-AC00_RS10860;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=AC00_RS10860;old_locus_tag=AC00_2891 NZ_JJLU01000090.1 Protein Homology CDS 15584 17047 . + 0 ID=cds-WP_032288258.1;Parent=gene-AC00_RS10860;Dbxref=GenBank:WP_032288258.1;Name=WP_032288258.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416989.1;locus_tag=AC00_RS10860;product=beta-barrel assembly-enhancing protease;protein_id=WP_032288258.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 17068 17427 . + . ID=gene-AC00_RS10855;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC00_RS10855;old_locus_tag=AC00_2892 NZ_JJLU01000090.1 Protein Homology CDS 17068 17427 . + 0 ID=cds-WP_000166449.1;Parent=gene-AC00_RS10855;Dbxref=GenBank:WP_000166449.1;Name=WP_000166449.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311384.1;locus_tag=AC00_RS10855;product=arsenate reductase (glutaredoxin);protein_id=WP_000166449.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 17565 18266 . - . ID=gene-AC00_RS10850;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=AC00_RS10850;old_locus_tag=AC00_2893 NZ_JJLU01000090.1 Protein Homology CDS 17565 18266 . - 0 ID=cds-WP_001307333.1;Parent=gene-AC00_RS10850;Dbxref=GenBank:WP_001307333.1;Name=WP_001307333.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=AC00_RS10850;product=DnaA inactivator Hda;protein_id=WP_001307333.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 18361 19650 . - . ID=gene-AC00_RS10845;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=AC00_RS10845;old_locus_tag=AC00_2894 NZ_JJLU01000090.1 Protein Homology CDS 18361 19650 . - 0 ID=cds-WP_032281422.1;Parent=gene-AC00_RS10845;Dbxref=GenBank:WP_032281422.1;Name=WP_032281422.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311386.1;locus_tag=AC00_RS10845;product=uracil permease;protein_id=WP_032281422.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 19736 20362 . - . ID=gene-AC00_RS10840;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AC00_RS10840;old_locus_tag=AC00_2895 NZ_JJLU01000090.1 Protein Homology CDS 19736 20362 . - 0 ID=cds-WP_001295473.1;Parent=gene-AC00_RS10840;Dbxref=GenBank:WP_001295473.1;Name=WP_001295473.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=AC00_RS10840;product=uracil phosphoribosyltransferase;protein_id=WP_001295473.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 20687 21724 . + . ID=gene-AC00_RS10835;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AC00_RS10835;old_locus_tag=AC00_2897 NZ_JJLU01000090.1 Protein Homology CDS 20687 21724 . + 0 ID=cds-WP_001295474.1;Parent=gene-AC00_RS10835;Dbxref=GenBank:WP_001295474.1;Name=WP_001295474.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311388.1;locus_tag=AC00_RS10835;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001295474.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 21724 22362 . + . ID=gene-AC00_RS10830;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AC00_RS10830;old_locus_tag=AC00_2898 NZ_JJLU01000090.1 Protein Homology CDS 21724 22362 . + 0 ID=cds-WP_001028618.1;Parent=gene-AC00_RS10830;Dbxref=GenBank:WP_001028618.1;Name=WP_001028618.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311389.1;locus_tag=AC00_RS10830;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001028618.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 22533 24599 . + . ID=gene-AC00_RS10825;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=AC00_RS10825;old_locus_tag=AC00_2899 NZ_JJLU01000090.1 Protein Homology CDS 22533 24599 . + 0 ID=cds-WP_000529576.1;Parent=gene-AC00_RS10825;Dbxref=GenBank:WP_000529576.1;Name=WP_000529576.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311390.1;locus_tag=AC00_RS10825;product=polyphosphate kinase 1;protein_id=WP_000529576.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 24604 26145 . + . ID=gene-AC00_RS10820;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=AC00_RS10820;old_locus_tag=AC00_2900 NZ_JJLU01000090.1 Protein Homology CDS 24604 26145 . + 0 ID=cds-WP_001121363.1;Parent=gene-AC00_RS10820;Dbxref=GenBank:WP_001121363.1;Name=WP_001121363.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311391.1;locus_tag=AC00_RS10820;product=exopolyphosphatase;protein_id=WP_001121363.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 26184 28427 . - . ID=gene-AC00_RS10815;Name=pdeF;gbkey=Gene;gene=pdeF;gene_biotype=protein_coding;locus_tag=AC00_RS10815;old_locus_tag=AC00_2901 NZ_JJLU01000090.1 Protein Homology CDS 26184 28427 . - 0 ID=cds-WP_032281423.1;Parent=gene-AC00_RS10815;Dbxref=GenBank:WP_032281423.1;Name=WP_032281423.1;gbkey=CDS;gene=pdeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416998.1;locus_tag=AC00_RS10815;product=cyclic-guanylate-specific phosphodiesterase PdeF;protein_id=WP_032281423.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 28609 28761 . - . ID=gene-AC00_RS30930;Name=AC00_RS30930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30930;old_locus_tag=AC00_2902 NZ_JJLU01000090.1 Protein Homology CDS 28609 28761 . - 0 ID=cds-WP_000017552.1;Parent=gene-AC00_RS30930;Dbxref=GenBank:WP_000017552.1;Name=WP_000017552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439271.1;locus_tag=AC00_RS30930;product=hypothetical protein;protein_id=WP_000017552.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 28779 28970 . + . ID=gene-AC00_RS0125185;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=AC00_RS0125185;old_locus_tag=AC00_2903 NZ_JJLU01000090.1 Protein Homology CDS 28779 28970 . + 0 ID=cds-WP_000076001.1;Parent=gene-AC00_RS0125185;Dbxref=GenBank:WP_000076001.1;Name=WP_000076001.1;gbkey=CDS;gene=yfgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416999.1;locus_tag=AC00_RS0125185;product=YfgG family protein;protein_id=WP_000076001.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 29281 29799 . + . ID=gene-AC00_RS10805;Name=yfgH;gbkey=Gene;gene=yfgH;gene_biotype=protein_coding;locus_tag=AC00_RS10805;old_locus_tag=AC00_2905 NZ_JJLU01000090.1 Protein Homology CDS 29281 29799 . + 0 ID=cds-WP_001295476.1;Parent=gene-AC00_RS10805;Dbxref=GenBank:WP_001295476.1;Name=WP_001295476.1;Ontology_term=GO:0019867;gbkey=CDS;gene=yfgH;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417000.1;locus_tag=AC00_RS10805;product=glycine zipper 2TM domain-containing protein;protein_id=WP_001295476.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 29815 30354 . + . ID=gene-AC00_RS10800;Name=yfgI;gbkey=Gene;gene=yfgI;gene_biotype=protein_coding;locus_tag=AC00_RS10800;old_locus_tag=AC00_2906 NZ_JJLU01000090.1 Protein Homology CDS 29815 30354 . + 0 ID=cds-WP_000755178.1;Parent=gene-AC00_RS10800;Dbxref=GenBank:WP_000755178.1;Name=WP_000755178.1;gbkey=CDS;gene=yfgI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311395.1;locus_tag=AC00_RS10800;product=DUF5384 family protein;protein_id=WP_000755178.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 30447 32024 . - . ID=gene-AC00_RS10795;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AC00_RS10795;old_locus_tag=AC00_2907 NZ_JJLU01000090.1 Protein Homology CDS 30447 32024 . - 0 ID=cds-WP_000138270.1;Parent=gene-AC00_RS10795;Dbxref=GenBank:WP_000138270.1;Name=WP_000138270.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=AC00_RS10795;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_000138270.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 32093 33559 . - . ID=gene-AC00_RS10790;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AC00_RS10790;old_locus_tag=AC00_2908 NZ_JJLU01000090.1 Protein Homology CDS 32093 33559 . - 0 ID=cds-WP_001299507.1;Parent=gene-AC00_RS10790;Dbxref=GenBank:WP_001299507.1;Name=WP_001299507.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=AC00_RS10790;product=IMP dehydrogenase;protein_id=WP_001299507.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 33721 35097 . + . ID=gene-AC00_RS10785;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AC00_RS10785;old_locus_tag=AC00_2910 NZ_JJLU01000090.1 Protein Homology CDS 33721 35097 . + 0 ID=cds-WP_032281424.1;Parent=gene-AC00_RS10785;Dbxref=GenBank:WP_032281424.1;Name=WP_032281424.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000937930.1;locus_tag=AC00_RS10785;product=exodeoxyribonuclease VII large subunit;protein_id=WP_032281424.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 35166 41585 . - . ID=gene-AC00_RS10780;Name=AC00_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10780;old_locus_tag=AC00_2911 NZ_JJLU01000090.1 Protein Homology CDS 35166 41585 . - 0 ID=cds-WP_032288260.1;Parent=gene-AC00_RS10780;Dbxref=GenBank:WP_032288260.1;Name=WP_032288260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016158776.1;locus_tag=AC00_RS10780;product=adhesion domain-containing protein;protein_id=WP_032288260.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 41876 42841 . - . ID=gene-AC00_RS10775;Name=AC00_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10775;old_locus_tag=AC00_2912 NZ_JJLU01000090.1 Protein Homology CDS 41876 42841 . - 0 ID=cds-WP_032288261.1;Parent=gene-AC00_RS10775;Dbxref=GenBank:WP_032288261.1;Name=WP_032288261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150753.1;locus_tag=AC00_RS10775;product=SinI family autotransporter-associated protein;protein_id=WP_032288261.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 42897 45077 . - . ID=gene-AC00_RS10770;Name=sinH;gbkey=Gene;gene=sinH;gene_biotype=protein_coding;locus_tag=AC00_RS10770;old_locus_tag=AC00_2913 NZ_JJLU01000090.1 Protein Homology CDS 42897 45077 . - 0 ID=cds-WP_032288263.1;Parent=gene-AC00_RS10770;Dbxref=GenBank:WP_032288263.1;Name=WP_032288263.1;gbkey=CDS;gene=sinH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000946972.1;locus_tag=AC00_RS10770;product=intimin-like inverse autotransporter SinH;protein_id=WP_032288263.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 45287 45502 . - . ID=gene-AC00_RS0125190;Name=AC00_RS0125190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125190 NZ_JJLU01000090.1 Protein Homology CDS 45287 45502 . - 0 ID=cds-WP_032281428.1;Parent=gene-AC00_RS0125190;Dbxref=GenBank:WP_032281428.1;Name=WP_032281428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196900.1;locus_tag=AC00_RS0125190;product=zinc ribbon domain-containing protein;protein_id=WP_032281428.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 45565 47037 . - . ID=gene-AC00_RS10765;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AC00_RS10765;old_locus_tag=AC00_2914 NZ_JJLU01000090.1 Protein Homology CDS 45565 47037 . - 0 ID=cds-WP_032281443.1;Parent=gene-AC00_RS10765;Dbxref=GenBank:WP_032281443.1;Name=WP_032281443.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417006.2;locus_tag=AC00_RS10765;product=ribosome biogenesis GTPase Der;protein_id=WP_032281443.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 47155 48333 . - . ID=gene-AC00_RS10760;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=AC00_RS10760;old_locus_tag=AC00_2915 NZ_JJLU01000090.1 Protein Homology CDS 47155 48333 . - 0 ID=cds-WP_021577800.1;Parent=gene-AC00_RS10760;Dbxref=GenBank:WP_021577800.1;Name=WP_021577800.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311401.1;locus_tag=AC00_RS10760;product=outer membrane protein assembly factor BamB;protein_id=WP_021577800.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 48344 48964 . - . ID=gene-AC00_RS10755;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=AC00_RS10755;old_locus_tag=AC00_2916 NZ_JJLU01000090.1 Protein Homology CDS 48344 48964 . - 0 ID=cds-WP_000409205.1;Parent=gene-AC00_RS10755;Dbxref=GenBank:WP_000409205.1;Name=WP_000409205.1;gbkey=CDS;gene=yfgM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=AC00_RS10755;product=ancillary SecYEG translocon subunit YfgM;protein_id=WP_000409205.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 48982 50256 . - . ID=gene-AC00_RS10750;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AC00_RS10750;old_locus_tag=AC00_2917 NZ_JJLU01000090.1 Protein Homology CDS 48982 50256 . - 0 ID=cds-WP_001107167.1;Parent=gene-AC00_RS10750;Dbxref=GenBank:WP_001107167.1;Name=WP_001107167.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=AC00_RS10750;product=histidine--tRNA ligase;protein_id=WP_001107167.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 50367 51485 . - . ID=gene-AC00_RS10745;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AC00_RS10745;old_locus_tag=AC00_2918 NZ_JJLU01000090.1 Protein Homology CDS 50367 51485 . - 0 ID=cds-WP_000551807.1;Parent=gene-AC00_RS10745;Dbxref=GenBank:WP_000551807.1;Name=WP_000551807.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=AC00_RS10745;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_000551807.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 51512 52525 . - . ID=gene-AC00_RS10740;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=AC00_RS10740;old_locus_tag=AC00_2919 NZ_JJLU01000090.1 Protein Homology CDS 51512 52525 . - 0 ID=cds-WP_001090844.1;Parent=gene-AC00_RS10740;Dbxref=GenBank:WP_001090844.1;Name=WP_001090844.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311405.1;locus_tag=AC00_RS10740;product=cytoskeleton protein RodZ;protein_id=WP_001090844.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 52810 53964 . - . ID=gene-AC00_RS10735;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=AC00_RS10735;old_locus_tag=AC00_2920 NZ_JJLU01000090.1 Protein Homology CDS 52810 53964 . - 0 ID=cds-WP_000003317.1;Parent=gene-AC00_RS10735;Dbxref=GenBank:WP_000003317.1;Name=WP_000003317.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417012.1;locus_tag=AC00_RS10735;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_000003317.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 54114 54545 . - . ID=gene-AC00_RS10730;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AC00_RS10730;old_locus_tag=AC00_2921 NZ_JJLU01000090.1 Protein Homology CDS 54114 54545 . - 0 ID=cds-WP_000963837.1;Parent=gene-AC00_RS10730;Dbxref=GenBank:WP_000963837.1;Name=WP_000963837.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311407.1;locus_tag=AC00_RS10730;product=nucleoside-diphosphate kinase;protein_id=WP_000963837.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 54693 57005 . - . ID=gene-AC00_RS10725;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=AC00_RS10725;old_locus_tag=AC00_2922 NZ_JJLU01000090.1 Protein Homology CDS 54693 57005 . - 0 ID=cds-WP_032281429.1;Parent=gene-AC00_RS10725;Dbxref=GenBank:WP_032281429.1;Name=WP_032281429.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417014.1;locus_tag=AC00_RS10725;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_032281429.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 57006 61967 . - . ID=gene-AC00_RS10720;Name=yfhM;gbkey=Gene;gene=yfhM;gene_biotype=protein_coding;locus_tag=AC00_RS10720;old_locus_tag=AC00_2923 NZ_JJLU01000090.1 Protein Homology CDS 57006 61967 . - 0 ID=cds-WP_032288265.1;Parent=gene-AC00_RS10720;Dbxref=GenBank:WP_032288265.1;Name=WP_032288265.1;gbkey=CDS;gene=yfhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311413.1;locus_tag=AC00_RS10720;product=alpha2-macroglobulin;protein_id=WP_032288265.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 62174 63019 . + . ID=gene-AC00_RS10715;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=AC00_RS10715;old_locus_tag=AC00_2924 NZ_JJLU01000090.1 Protein Homology CDS 62174 63019 . + 0 ID=cds-WP_032281431.1;Parent=gene-AC00_RS10715;Dbxref=GenBank:WP_032281431.1;Name=WP_032281431.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311414.2;locus_tag=AC00_RS10715;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_032281431.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 63362 63487 . + . ID=gene-AC00_RS31275;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AC00_RS31275;old_locus_tag=AC00_2925 NZ_JJLU01000090.1 Protein Homology CDS 63362 63487 . + 0 ID=cds-WP_001491247.1;Parent=gene-AC00_RS31275;Dbxref=GenBank:WP_001491247.1;Name=WP_001491247.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AC00_RS31275;product=small toxic inner membrane protein TimP;protein_id=WP_001491247.1;transl_table=11 NZ_JJLU01000090.1 RefSeq pseudogene 63518 63604 . - . ID=gene-AC00_RS30935;Name=AC00_RS30935;end_range=63604,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30935;partial=true;pseudo=true NZ_JJLU01000090.1 Protein Homology CDS 63518 63604 . - 0 ID=cds-AC00_RS30935;Parent=gene-AC00_RS30935;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=63604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=AC00_RS30935;partial=true;product=enhanced serine sensitivity protein SseB;pseudo=true;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 64043 64168 . + . ID=gene-AC00_RS31280;Name=timP;gbkey=Gene;gene=timP;gene_biotype=protein_coding;locus_tag=AC00_RS31280;old_locus_tag=AC00_2928 NZ_JJLU01000090.1 Protein Homology CDS 64043 64168 . + 0 ID=cds-WP_001491247.1-2;Parent=gene-AC00_RS31280;Dbxref=GenBank:WP_001491247.1;Name=WP_001491247.1;gbkey=CDS;gene=timP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010283914.1;locus_tag=AC00_RS31280;product=small toxic inner membrane protein TimP;protein_id=WP_001491247.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 64200 64976 . - . ID=gene-AC00_RS10705;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=AC00_RS10705;old_locus_tag=AC00_2929 NZ_JJLU01000090.1 Protein Homology CDS 64200 64976 . - 0 ID=cds-WP_001354817.1;Parent=gene-AC00_RS10705;Dbxref=GenBank:WP_001354817.1;Name=WP_001354817.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=AC00_RS10705;product=enhanced serine sensitivity protein SseB;protein_id=WP_001354817.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 65119 66402 . - . ID=gene-AC00_RS10700;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=AC00_RS10700;old_locus_tag=AC00_2930 NZ_JJLU01000090.1 Protein Homology CDS 65119 66402 . - 0 ID=cds-WP_032281432.1;Parent=gene-AC00_RS10700;Dbxref=GenBank:WP_032281432.1;Name=WP_032281432.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311416.2;locus_tag=AC00_RS10700;product=aminopeptidase PepB;protein_id=WP_032281432.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 66461 66661 . - . ID=gene-AC00_RS10695;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=AC00_RS10695;old_locus_tag=AC00_2931 NZ_JJLU01000090.1 Protein Homology CDS 66461 66661 . - 0 ID=cds-WP_000523616.1;Parent=gene-AC00_RS10695;Dbxref=GenBank:WP_000523616.1;Name=WP_000523616.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=AC00_RS10695;product=Fe-S cluster assembly protein IscX;protein_id=WP_000523616.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 66673 67008 . - . ID=gene-AC00_RS10690;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=AC00_RS10690;old_locus_tag=AC00_2932 NZ_JJLU01000090.1 Protein Homology CDS 66673 67008 . - 0 ID=cds-WP_001124469.1;Parent=gene-AC00_RS10690;Dbxref=GenBank:WP_001124469.1;Name=WP_001124469.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=AC00_RS10690;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_001124469.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 67010 68860 . - . ID=gene-AC00_RS10685;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AC00_RS10685;old_locus_tag=AC00_2933 NZ_JJLU01000090.1 Protein Homology CDS 67010 68860 . - 0 ID=cds-WP_001196613.1;Parent=gene-AC00_RS10685;Dbxref=GenBank:WP_001196613.1;Name=WP_001196613.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=AC00_RS10685;product=Fe-S protein assembly chaperone HscA;protein_id=WP_001196613.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 68877 69392 . - . ID=gene-AC00_RS10680;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AC00_RS10680;old_locus_tag=AC00_2934 NZ_JJLU01000090.1 Protein Homology CDS 68877 69392 . - 0 ID=cds-WP_000384413.1;Parent=gene-AC00_RS10680;Dbxref=GenBank:WP_000384413.1;Name=WP_000384413.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=AC00_RS10680;product=co-chaperone HscB;protein_id=WP_000384413.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 69488 69811 . - . ID=gene-AC00_RS10675;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AC00_RS10675;old_locus_tag=AC00_2936 NZ_JJLU01000090.1 Protein Homology CDS 69488 69811 . - 0 ID=cds-WP_000028953.1;Parent=gene-AC00_RS10675;Dbxref=GenBank:WP_000028953.1;Name=WP_000028953.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=AC00_RS10675;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_000028953.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 69828 70214 . - . ID=gene-AC00_RS10670;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=AC00_RS10670;old_locus_tag=AC00_2937 NZ_JJLU01000090.1 Protein Homology CDS 69828 70214 . - 0 ID=cds-WP_032281433.1;Parent=gene-AC00_RS10670;Dbxref=GenBank:WP_032281433.1;Name=WP_032281433.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=AC00_RS10670;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_032281433.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 70242 71456 . - . ID=gene-AC00_RS10665;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=AC00_RS10665;old_locus_tag=AC00_2938 NZ_JJLU01000090.1 Protein Homology CDS 70242 71456 . - 0 ID=cds-WP_001295373.1;Parent=gene-AC00_RS10665;Dbxref=GenBank:WP_001295373.1;Name=WP_001295373.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=AC00_RS10665;product=cysteine desulfurase;protein_id=WP_001295373.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 71568 72056 . - . ID=gene-AC00_RS10660;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=AC00_RS10660;old_locus_tag=AC00_2939 NZ_JJLU01000090.1 Protein Homology CDS 71568 72056 . - 0 ID=cds-WP_001241357.1;Parent=gene-AC00_RS10660;Dbxref=GenBank:WP_001241357.1;Name=WP_001241357.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=AC00_RS10660;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_001241357.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 72327 73067 . - . ID=gene-AC00_RS10655;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=AC00_RS10655;old_locus_tag=AC00_2940 NZ_JJLU01000090.1 Protein Homology CDS 72327 73067 . - 0 ID=cds-WP_000940019.1;Parent=gene-AC00_RS10655;Dbxref=GenBank:WP_000940019.1;Name=WP_000940019.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417027.1;locus_tag=AC00_RS10655;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_000940019.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 73186 73989 . + . ID=gene-AC00_RS10650;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=AC00_RS10650;old_locus_tag=AC00_2941 NZ_JJLU01000090.1 Protein Homology CDS 73186 73989 . + 0 ID=cds-WP_000553451.1;Parent=gene-AC00_RS10650;Dbxref=GenBank:WP_000553451.1;Name=WP_000553451.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=AC00_RS10650;product=inositol-1-monophosphatase;protein_id=WP_000553451.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 74134 74988 . + . ID=gene-AC00_RS10645;Name=yfhR;gbkey=Gene;gene=yfhR;gene_biotype=protein_coding;locus_tag=AC00_RS10645;old_locus_tag=AC00_2942 NZ_JJLU01000090.1 Protein Homology CDS 74134 74988 . + 0 ID=cds-WP_021569559.1;Parent=gene-AC00_RS10645;Dbxref=GenBank:WP_021569559.1;Name=WP_021569559.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhR;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311427.2;locus_tag=AC00_RS10645;product=alpha/beta hydrolase;protein_id=WP_021569559.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 75179 76459 . + . ID=gene-AC00_RS10640;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=AC00_RS10640;old_locus_tag=AC00_2943 NZ_JJLU01000090.1 Protein Homology CDS 75179 76459 . + 0 ID=cds-WP_000982994.1;Parent=gene-AC00_RS10640;Dbxref=GenBank:WP_000982994.1;Name=WP_000982994.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417030.2;locus_tag=AC00_RS10640;product=stationary phase inducible protein CsiE;protein_id=WP_000982994.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 76451 77590 . - . ID=gene-AC00_RS10635;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=AC00_RS10635;old_locus_tag=AC00_2944 NZ_JJLU01000090.1 Protein Homology CDS 76451 77590 . - 0 ID=cds-WP_032281434.1;Parent=gene-AC00_RS10635;Dbxref=GenBank:WP_032281434.1;Name=WP_032281434.1;gbkey=CDS;gene=hcaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311429.1;locus_tag=AC00_RS10635;product=3-phenylpropionate MFS transporter;protein_id=WP_032281434.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 77750 78640 . - . ID=gene-AC00_RS10630;Name=hcaR;gbkey=Gene;gene=hcaR;gene_biotype=protein_coding;locus_tag=AC00_RS10630;old_locus_tag=AC00_2945 NZ_JJLU01000090.1 Protein Homology CDS 77750 78640 . - 0 ID=cds-WP_000423257.1;Parent=gene-AC00_RS10630;Dbxref=GenBank:WP_000423257.1;Name=WP_000423257.1;gbkey=CDS;gene=hcaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311430.1;locus_tag=AC00_RS10630;product=DNA-binding transcriptional regulator HcaR;protein_id=WP_000423257.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 78776 80137 . + . ID=gene-AC00_RS10625;Name=hcaE;gbkey=Gene;gene=hcaE;gene_biotype=protein_coding;locus_tag=AC00_RS10625;old_locus_tag=AC00_2946 NZ_JJLU01000090.1 Protein Homology CDS 78776 80137 . + 0 ID=cds-WP_000211172.1;Parent=gene-AC00_RS10625;Dbxref=GenBank:WP_000211172.1;Name=WP_000211172.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaE;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311431.1;locus_tag=AC00_RS10625;product=3-phenylpropionate/cinnamic acid dioxygenase subunit alpha;protein_id=WP_000211172.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 80134 80652 . + . ID=gene-AC00_RS10620;Name=hcaF;gbkey=Gene;gene=hcaF;gene_biotype=protein_coding;locus_tag=AC00_RS10620;old_locus_tag=AC00_2947 NZ_JJLU01000090.1 Protein Homology CDS 80134 80652 . + 0 ID=cds-WP_001374469.1;Parent=gene-AC00_RS10620;Dbxref=GenBank:WP_001374469.1;Name=WP_001374469.1;Ontology_term=GO:0019380,GO:0008695;gbkey=CDS;gene=hcaF;go_function=3-phenylpropionate dioxygenase activity|0008695||IEA;go_process=3-phenylpropionate catabolic process|0019380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417034.1;locus_tag=AC00_RS10620;product=3-phenylpropionate/cinnamic acid dioxygenase subunit beta;protein_id=WP_001374469.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 80652 80972 . + . ID=gene-AC00_RS10615;Name=hcaC;gbkey=Gene;gene=hcaC;gene_biotype=protein_coding;locus_tag=AC00_RS10615;old_locus_tag=AC00_2948 NZ_JJLU01000090.1 Protein Homology CDS 80652 80972 . + 0 ID=cds-WP_001080102.1;Parent=gene-AC00_RS10615;Dbxref=GenBank:WP_001080102.1;Name=WP_001080102.1;Ontology_term=GO:0051537;gbkey=CDS;gene=hcaC;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311433.1;locus_tag=AC00_RS10615;product=bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit;protein_id=WP_001080102.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 80969 81781 . + . ID=gene-AC00_RS10610;Name=hcaB;gbkey=Gene;gene=hcaB;gene_biotype=protein_coding;gene_synonym=phdD,yfhX;locus_tag=AC00_RS10610;old_locus_tag=AC00_2949 NZ_JJLU01000090.1 Protein Homology CDS 80969 81781 . + 0 ID=cds-WP_001281372.1;Parent=gene-AC00_RS10610;Dbxref=GenBank:WP_001281372.1;Name=WP_001281372.1;gbkey=CDS;gene=hcaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311434.1;locus_tag=AC00_RS10610;product=3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase;protein_id=WP_001281372.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 81791 82993 . + . ID=gene-AC00_RS10605;Name=hcaD;gbkey=Gene;gene=hcaD;gene_biotype=protein_coding;locus_tag=AC00_RS10605;old_locus_tag=AC00_2950 NZ_JJLU01000090.1 Protein Homology CDS 81791 82993 . + 0 ID=cds-WP_032281435.1;Parent=gene-AC00_RS10605;Dbxref=GenBank:WP_032281435.1;Name=WP_032281435.1;gbkey=CDS;gene=hcaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311435.1;locus_tag=AC00_RS10605;product=phenylpropionate dioxygenase ferredoxin reductase subunit;protein_id=WP_032281435.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 83090 83512 . + . ID=gene-AC00_RS10600;Name=yphA;gbkey=Gene;gene=yphA;gene_biotype=protein_coding;locus_tag=AC00_RS10600;old_locus_tag=AC00_2951 NZ_JJLU01000090.1 Protein Homology CDS 83090 83512 . + 0 ID=cds-WP_001087250.1;Parent=gene-AC00_RS10600;Dbxref=GenBank:WP_001087250.1;Name=WP_001087250.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yphA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311436.2;locus_tag=AC00_RS10600;product=DoxX family protein;protein_id=WP_001087250.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 83560 84432 . - . ID=gene-AC00_RS10595;Name=yphB;gbkey=Gene;gene=yphB;gene_biotype=protein_coding;locus_tag=AC00_RS10595;old_locus_tag=AC00_2952 NZ_JJLU01000090.1 Protein Homology CDS 83560 84432 . - 0 ID=cds-WP_032281436.1;Parent=gene-AC00_RS10595;Dbxref=GenBank:WP_032281436.1;Name=WP_032281436.1;gbkey=CDS;gene=yphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311437.1;locus_tag=AC00_RS10595;product=aldose 1-epimerase;protein_id=WP_032281436.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 84444 85538 . - . ID=gene-AC00_RS10590;Name=yphC;gbkey=Gene;gene=yphC;gene_biotype=protein_coding;locus_tag=AC00_RS10590;old_locus_tag=AC00_2953 NZ_JJLU01000090.1 Protein Homology CDS 84444 85538 . - 0 ID=cds-WP_000700809.1;Parent=gene-AC00_RS10590;Dbxref=GenBank:WP_000700809.1;Name=WP_000700809.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;gene=yphC;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708383.1;locus_tag=AC00_RS10590;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_000700809.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 85571 86569 . - . ID=gene-AC00_RS10585;Name=yphD;gbkey=Gene;gene=yphD;gene_biotype=protein_coding;locus_tag=AC00_RS10585;old_locus_tag=AC00_2954 NZ_JJLU01000090.1 Protein Homology CDS 85571 86569 . - 0 ID=cds-WP_001276664.1;Parent=gene-AC00_RS10585;Dbxref=GenBank:WP_001276664.1;Name=WP_001276664.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;gene=yphD;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311439.1;locus_tag=AC00_RS10585;product=ABC transporter permease;protein_id=WP_001276664.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 86594 88105 . - . ID=gene-AC00_RS10580;Name=yphE;gbkey=Gene;gene=yphE;gene_biotype=protein_coding;locus_tag=AC00_RS10580;old_locus_tag=AC00_2955 NZ_JJLU01000090.1 Protein Homology CDS 86594 88105 . - 0 ID=cds-WP_000493510.1;Parent=gene-AC00_RS10580;Dbxref=GenBank:WP_000493510.1;Name=WP_000493510.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yphE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311440.1;locus_tag=AC00_RS10580;product=sugar ABC transporter ATP-binding protein;protein_id=WP_000493510.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 88128 89111 . - . ID=gene-AC00_RS10575;Name=yphF;gbkey=Gene;gene=yphF;gene_biotype=protein_coding;locus_tag=AC00_RS10575;old_locus_tag=AC00_2956 NZ_JJLU01000090.1 Protein Homology CDS 88128 89111 . - 0 ID=cds-WP_001124894.1;Parent=gene-AC00_RS10575;Dbxref=GenBank:WP_001124894.1;Name=WP_001124894.1;gbkey=CDS;gene=yphF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311441.1;locus_tag=AC00_RS10575;product=substrate-binding domain-containing protein;protein_id=WP_001124894.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 89208 92489 . - . ID=gene-AC00_RS10570;Name=yphG;gbkey=Gene;gene=yphG;gene_biotype=protein_coding;locus_tag=AC00_RS10570;old_locus_tag=AC00_2957 NZ_JJLU01000090.1 Protein Homology CDS 89208 92489 . - 0 ID=cds-WP_032288266.1;Parent=gene-AC00_RS10570;Dbxref=GenBank:WP_032288266.1;Name=WP_032288266.1;gbkey=CDS;gene=yphG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311442.2;locus_tag=AC00_RS10570;product=DUF5107 domain-containing protein;protein_id=WP_032288266.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 92607 93800 . + . ID=gene-AC00_RS10565;Name=yphH;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=AC00_RS10565;old_locus_tag=AC00_2958 NZ_JJLU01000090.1 Protein Homology CDS 92607 93800 . + 0 ID=cds-WP_032281438.1;Parent=gene-AC00_RS10565;Dbxref=GenBank:WP_032281438.1;Name=WP_032281438.1;gbkey=CDS;gene=yphH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311443.2;locus_tag=AC00_RS10565;product=ROK family protein;protein_id=WP_032281438.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 93863 95116 . - . ID=gene-AC00_RS10560;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AC00_RS10560;old_locus_tag=AC00_2959 NZ_JJLU01000090.1 Protein Homology CDS 93863 95116 . - 0 ID=cds-WP_000919159.1;Parent=gene-AC00_RS10560;Dbxref=GenBank:WP_000919159.1;Name=WP_000919159.1;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=AC00_RS10560;product=serine hydroxymethyltransferase;protein_id=WP_000919159.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 95444 96634 . + . ID=gene-AC00_RS10555;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=AC00_RS10555;old_locus_tag=AC00_2961 NZ_JJLU01000090.1 Protein Homology CDS 95444 96634 . + 0 ID=cds-WP_000883120.1;Parent=gene-AC00_RS10555;Dbxref=GenBank:WP_000883120.1;Name=WP_000883120.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311445.1;locus_tag=AC00_RS10555;product=NO-inducible flavohemoprotein;protein_id=WP_000883120.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 96679 97017 . - . ID=gene-AC00_RS10550;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=AC00_RS10550;old_locus_tag=AC00_2962 NZ_JJLU01000090.1 Protein Homology CDS 96679 97017 . - 0 ID=cds-WP_000717694.1;Parent=gene-AC00_RS10550;Dbxref=GenBank:WP_000717694.1;Name=WP_000717694.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=AC00_RS10550;product=nitrogen regulatory protein P-II;protein_id=WP_000717694.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 97078 98412 . - . ID=gene-AC00_RS10545;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=AC00_RS10545;old_locus_tag=AC00_2963 NZ_JJLU01000090.1 Protein Homology CDS 97078 98412 . - 0 ID=cds-WP_050438653.1;Parent=gene-AC00_RS10545;Dbxref=GenBank:WP_050438653.1;Name=WP_050438653.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311447.1;locus_tag=AC00_RS10545;product=two-component system response regulator GlrR;protein_id=WP_050438653.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 98402 99115 . - . ID=gene-AC00_RS10540;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=AC00_RS10540;old_locus_tag=AC00_2964 NZ_JJLU01000090.1 Protein Homology CDS 98402 99115 . - 0 ID=cds-WP_032281439.1;Parent=gene-AC00_RS10540;Dbxref=GenBank:WP_032281439.1;Name=WP_032281439.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311448.1;locus_tag=AC00_RS10540;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_032281439.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 99280 100704 . - . ID=gene-AC00_RS10535;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=AC00_RS10535;old_locus_tag=AC00_2965 NZ_JJLU01000090.1 Protein Homology CDS 99280 100704 . - 0 ID=cds-WP_032281440.1;Parent=gene-AC00_RS10535;Dbxref=GenBank:WP_032281440.1;Name=WP_032281440.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417051.2;locus_tag=AC00_RS10535;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_032281440.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 101280 105167 . - . ID=gene-AC00_RS10530;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AC00_RS10530;old_locus_tag=AC00_2967 NZ_JJLU01000090.1 Protein Homology CDS 101280 105167 . - 0 ID=cds-WP_032281441.1;Parent=gene-AC00_RS10530;Dbxref=GenBank:WP_032281441.1;Name=WP_032281441.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311450.1;locus_tag=AC00_RS10530;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_032281441.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 105425 106981 . + . ID=gene-AC00_RS10525;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=AC00_RS10525;old_locus_tag=AC00_2970 NZ_JJLU01000090.1 Protein Homology CDS 105425 106981 . + 0 ID=cds-WP_000734212.1;Parent=gene-AC00_RS10525;Dbxref=GenBank:WP_000734212.1;Name=WP_000734212.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417053.2;locus_tag=AC00_RS10525;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_000734212.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 106978 107481 . - . ID=gene-AC00_RS10520;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AC00_RS10520;old_locus_tag=AC00_2971 NZ_JJLU01000090.1 Protein Homology CDS 106978 107481 . - 0 ID=cds-WP_001301544.1;Parent=gene-AC00_RS10520;Dbxref=GenBank:WP_001301544.1;Name=WP_001301544.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311452.2;locus_tag=AC00_RS10520;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_001301544.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 107539 108174 . - . ID=gene-AC00_RS10515;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=AC00_RS10515;old_locus_tag=AC00_2972 NZ_JJLU01000090.1 Protein Homology CDS 107539 108174 . - 0 ID=cds-WP_032281442.1;Parent=gene-AC00_RS10515;Dbxref=GenBank:WP_032281442.1;Name=WP_032281442.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311453.2;locus_tag=AC00_RS10515;product=phosphatidylglycerophosphatase C;protein_id=WP_032281442.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 108383 109231 . + . ID=gene-AC00_RS10510;Name=yfhH;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=AC00_RS10510;old_locus_tag=AC00_2973 NZ_JJLU01000090.1 Protein Homology CDS 108383 109231 . + 0 ID=cds-WP_001013779.1;Parent=gene-AC00_RS10510;Dbxref=GenBank:WP_001013779.1;Name=WP_001013779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yfhH;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417056.2;locus_tag=AC00_RS10510;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001013779.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 109287 109547 . + . ID=gene-AC00_RS10505;Name=yfhL;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=AC00_RS10505;old_locus_tag=AC00_2974 NZ_JJLU01000090.1 Protein Homology CDS 109287 109547 . + 0 ID=cds-WP_001196285.1;Parent=gene-AC00_RS10505;Dbxref=GenBank:WP_001196285.1;Name=WP_001196285.1;gbkey=CDS;gene=yfhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311455.1;locus_tag=AC00_RS10505;product=4Fe-4S dicluster ferredoxin YfhL;protein_id=WP_001196285.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 109741 109821 . - . ID=gene-AC00_RS0125195;Name=shoB;gbkey=Gene;gene=shoB;gene_biotype=protein_coding;locus_tag=AC00_RS0125195 NZ_JJLU01000090.1 Protein Homology CDS 109741 109821 . - 0 ID=cds-WP_000128776.1;Parent=gene-AC00_RS0125195;Dbxref=GenBank:WP_000128776.1;Name=WP_000128776.1;gbkey=CDS;gene=shoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791251.1;locus_tag=AC00_RS0125195;product=type I toxin-antitoxin system toxin ShoB;protein_id=WP_000128776.1;transl_table=11 NZ_JJLU01000090.1 RefSeq gene 110081 110287 . + . ID=gene-AC00_RS27985;Name=AC00_RS27985;end_range=110287,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS27985;old_locus_tag=AC00_2975;partial=true NZ_JJLU01000090.1 Protein Homology CDS 110081 110287 . + 0 ID=cds-WP_000179203.1;Parent=gene-AC00_RS27985;Dbxref=GenBank:WP_000179203.1;Name=WP_000179203.1;Ontology_term=GO:0006313;end_range=110287,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS27985;partial=true;product=IS1 family transposase;protein_id=WP_000179203.1;transl_table=11 ##sequence-region NZ_JJLU01000091.1 1 28954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000091.1 RefSeq region 1 28954 . + . ID=NZ_JJLU01000091.1:1..28954;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000091.1 RefSeq gene 1 255 . + . ID=gene-AC00_RS10500;Name=AC00_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10500;old_locus_tag=AC00_2976;partial=true;start_range=.,1 NZ_JJLU01000091.1 Protein Homology CDS 1 255 . + 0 ID=cds-WP_000474469.1-4;Parent=gene-AC00_RS10500;Dbxref=GenBank:WP_000474469.1;Name=WP_000474469.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014654019.1;locus_tag=AC00_RS10500;partial=true;product=IS1 family transposase;protein_id=WP_000474469.1;start_range=.,1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 497 877 . - . ID=gene-AC00_RS10495;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=AC00_RS10495;old_locus_tag=AC00_2977 NZ_JJLU01000091.1 Protein Homology CDS 497 877 . - 0 ID=cds-WP_000986024.1;Parent=gene-AC00_RS10495;Dbxref=GenBank:WP_000986024.1;Name=WP_000986024.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=AC00_RS10495;product=holo-ACP synthase;protein_id=WP_000986024.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 877 1608 . - . ID=gene-AC00_RS10490;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=AC00_RS10490;old_locus_tag=AC00_2978 NZ_JJLU01000091.1 Protein Homology CDS 877 1608 . - 0 ID=cds-WP_001295365.1;Parent=gene-AC00_RS10490;Dbxref=GenBank:WP_001295365.1;Name=WP_001295365.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311457.1;locus_tag=AC00_RS10490;product=pyridoxine 5'-phosphate synthase;protein_id=WP_001295365.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 1620 2348 . - . ID=gene-AC00_RS10485;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AC00_RS10485;old_locus_tag=AC00_2979 NZ_JJLU01000091.1 Protein Homology CDS 1620 2348 . - 0 ID=cds-WP_032288267.1;Parent=gene-AC00_RS10485;Dbxref=GenBank:WP_032288267.1;Name=WP_032288267.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311458.1;locus_tag=AC00_RS10485;product=DNA repair protein RecO;protein_id=WP_032288267.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 2360 3265 . - . ID=gene-AC00_RS10480;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AC00_RS10480;old_locus_tag=AC00_2980 NZ_JJLU01000091.1 Protein Homology CDS 2360 3265 . - 0 ID=cds-WP_000020749.1;Parent=gene-AC00_RS10480;Dbxref=GenBank:WP_000020749.1;Name=WP_000020749.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417061.1;locus_tag=AC00_RS10480;product=GTPase Era;protein_id=WP_000020749.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 3262 3942 . - . ID=gene-AC00_RS10475;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AC00_RS10475;old_locus_tag=AC00_2981 NZ_JJLU01000091.1 Protein Homology CDS 3262 3942 . - 0 ID=cds-WP_001068343.1;Parent=gene-AC00_RS10475;Dbxref=GenBank:WP_001068343.1;Name=WP_001068343.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=AC00_RS10475;product=ribonuclease III;protein_id=WP_001068343.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 4215 5189 . - . ID=gene-AC00_RS10470;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AC00_RS10470;old_locus_tag=AC00_2982 NZ_JJLU01000091.1 Protein Homology CDS 4215 5189 . - 0 ID=cds-WP_032281446.1;Parent=gene-AC00_RS10470;Dbxref=GenBank:WP_032281446.1;Name=WP_032281446.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311461.1;locus_tag=AC00_RS10470;product=signal peptidase I;protein_id=WP_032281446.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 5205 7004 . - . ID=gene-AC00_RS10465;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AC00_RS10465;old_locus_tag=AC00_2983 NZ_JJLU01000091.1 Protein Homology CDS 5205 7004 . - 0 ID=cds-WP_000790168.1;Parent=gene-AC00_RS10465;Dbxref=GenBank:WP_000790168.1;Name=WP_000790168.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311462.1;locus_tag=AC00_RS10465;product=translation elongation factor 4;protein_id=WP_000790168.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 7202 7681 . - . ID=gene-AC00_RS10460;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=AC00_RS10460;old_locus_tag=AC00_2984 NZ_JJLU01000091.1 Protein Homology CDS 7202 7681 . - 0 ID=cds-WP_000589070.1;Parent=gene-AC00_RS10460;Dbxref=GenBank:WP_000589070.1;Name=WP_000589070.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311463.1;locus_tag=AC00_RS10460;product=SoxR-reducing system protein RseC;protein_id=WP_000589070.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 7678 8634 . - . ID=gene-AC00_RS10455;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=AC00_RS10455;old_locus_tag=AC00_2985 NZ_JJLU01000091.1 Protein Homology CDS 7678 8634 . - 0 ID=cds-WP_000812053.1;Parent=gene-AC00_RS10455;Dbxref=GenBank:WP_000812053.1;Name=WP_000812053.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311464.1;locus_tag=AC00_RS10455;product=sigma-E factor regulatory protein RseB;protein_id=WP_000812053.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 8634 9284 . - . ID=gene-AC00_RS10450;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=AC00_RS10450;old_locus_tag=AC00_2986 NZ_JJLU01000091.1 Protein Homology CDS 8634 9284 . - 0 ID=cds-WP_001168459.1;Parent=gene-AC00_RS10450;Dbxref=GenBank:WP_001168459.1;Name=WP_001168459.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417067.1;locus_tag=AC00_RS10450;product=anti-sigma-E factor RseA;protein_id=WP_001168459.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 9317 9892 . - . ID=gene-AC00_RS10445;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=AC00_RS10445;old_locus_tag=AC00_2987 NZ_JJLU01000091.1 Protein Homology CDS 9317 9892 . - 0 ID=cds-WP_001295364.1;Parent=gene-AC00_RS10445;Dbxref=GenBank:WP_001295364.1;Name=WP_001295364.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=AC00_RS10445;product=RNA polymerase sigma factor RpoE;protein_id=WP_001295364.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 9889 10044 . - . ID=gene-AC00_RS30445;Name=rseD;gbkey=Gene;gene=rseD;gene_biotype=protein_coding;locus_tag=AC00_RS30445 NZ_JJLU01000091.1 Protein Homology CDS 9889 10044 . - 0 ID=cds-WP_001303621.1;Parent=gene-AC00_RS30445;Dbxref=GenBank:WP_001303621.1;Name=WP_001303621.1;gbkey=CDS;gene=rseD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518806.1;locus_tag=AC00_RS30445;product=rpoE leader peptide RseD;protein_id=WP_001303621.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 10300 11922 . + . ID=gene-AC00_RS10440;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=AC00_RS10440;old_locus_tag=AC00_2988 NZ_JJLU01000091.1 Protein Homology CDS 10300 11922 . + 0 ID=cds-WP_032281447.1;Parent=gene-AC00_RS10440;Dbxref=GenBank:WP_032281447.1;Name=WP_032281447.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417069.1;locus_tag=AC00_RS10440;product=L-aspartate oxidase;protein_id=WP_032281447.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 11907 12644 . - . ID=gene-AC00_RS10435;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=AC00_RS10435;old_locus_tag=AC00_2989 NZ_JJLU01000091.1 Protein Homology CDS 11907 12644 . - 0 ID=cds-WP_032281448.1;Parent=gene-AC00_RS10435;Dbxref=GenBank:WP_032281448.1;Name=WP_032281448.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417070.2;locus_tag=AC00_RS10435;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_032281448.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 12776 14110 . + . ID=gene-AC00_RS10430;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=AC00_RS10430;old_locus_tag=AC00_2991 NZ_JJLU01000091.1 Protein Homology CDS 12776 14110 . + 0 ID=cds-WP_000219193.1;Parent=gene-AC00_RS10430;Dbxref=GenBank:WP_000219193.1;Name=WP_000219193.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311469.1;locus_tag=AC00_RS10430;product=ATP-dependent RNA helicase SrmB;protein_id=WP_000219193.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 14143 15024 . - . ID=gene-AC00_RS10425;Name=yfiE;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=AC00_RS10425;old_locus_tag=AC00_2992 NZ_JJLU01000091.1 Protein Homology CDS 14143 15024 . - 0 ID=cds-WP_001383425.1;Parent=gene-AC00_RS10425;Dbxref=GenBank:WP_001383425.1;Name=WP_001383425.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yfiE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311470.2;locus_tag=AC00_RS10425;product=LysR family transcriptional regulator;protein_id=WP_001383425.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 15127 15714 . + . ID=gene-AC00_RS10420;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=AC00_RS10420;old_locus_tag=AC00_2993 NZ_JJLU01000091.1 Protein Homology CDS 15127 15714 . + 0 ID=cds-WP_032281449.1;Parent=gene-AC00_RS10420;Dbxref=GenBank:WP_032281449.1;Name=WP_032281449.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311471.1;locus_tag=AC00_RS10420;product=cysteine/O-acetylserine transporter;protein_id=WP_032281449.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 15770 16153 . - . ID=gene-AC00_RS10415;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=AC00_RS10415;old_locus_tag=AC00_2994 NZ_JJLU01000091.1 Protein Homology CDS 15770 16153 . - 0 ID=cds-WP_000627804.1;Parent=gene-AC00_RS10415;Dbxref=GenBank:WP_000627804.1;Name=WP_000627804.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=AC00_RS10415;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_000627804.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 16458 17147 . + . ID=gene-AC00_RS10410;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AC00_RS10410;old_locus_tag=AC00_2995 NZ_JJLU01000091.1 Protein Homology CDS 16458 17147 . + 0 ID=cds-WP_001262720.1;Parent=gene-AC00_RS10410;Dbxref=GenBank:WP_001262720.1;Name=WP_001262720.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311473.2;locus_tag=AC00_RS10410;product=uracil-DNA glycosylase;protein_id=WP_001262720.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 17195 18232 . - . ID=gene-AC00_RS10405;Name=yfiF;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=AC00_RS10405;old_locus_tag=AC00_2996 NZ_JJLU01000091.1 Protein Homology CDS 17195 18232 . - 0 ID=cds-WP_000997403.1;Parent=gene-AC00_RS10405;Dbxref=GenBank:WP_000997403.1;Name=WP_000997403.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=yfiF;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311474.1;locus_tag=AC00_RS10405;product=tRNA/rRNA methyltransferase;protein_id=WP_000997403.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 18439 18858 . + . ID=gene-AC00_RS0125215;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=AC00_RS0125215;old_locus_tag=AC00_2997 NZ_JJLU01000091.1 Protein Homology CDS 18439 18858 . + 0 ID=cds-WP_001098726.1;Parent=gene-AC00_RS0125215;Dbxref=GenBank:WP_001098726.1;Name=WP_001098726.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311475.1;locus_tag=AC00_RS0125215;product=thioredoxin TrxC;protein_id=WP_001098726.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 18927 19625 . + . ID=gene-AC00_RS10400;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=AC00_RS10400;old_locus_tag=AC00_2998 NZ_JJLU01000091.1 Protein Homology CDS 18927 19625 . + 0 ID=cds-WP_032281451.1;Parent=gene-AC00_RS10400;Dbxref=GenBank:WP_032281451.1;Name=WP_032281451.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311476.2;locus_tag=AC00_RS10400;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_032281451.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 19657 22317 . + . ID=gene-AC00_RS10395;Name=patZ;gbkey=Gene;gene=patZ;gene_biotype=protein_coding;locus_tag=AC00_RS10395;old_locus_tag=AC00_2999 NZ_JJLU01000091.1 Protein Homology CDS 19657 22317 . + 0 ID=cds-WP_000082981.1;Parent=gene-AC00_RS10395;Dbxref=GenBank:WP_000082981.1;Name=WP_000082981.1;gbkey=CDS;gene=patZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_306183.1;locus_tag=AC00_RS10395;product=peptidyl-lysine N-acetyltransferase PatZ;protein_id=WP_000082981.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 22431 23786 . + . ID=gene-AC00_RS10390;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AC00_RS10390;old_locus_tag=AC00_3000 NZ_JJLU01000091.1 Protein Homology CDS 22431 23786 . + 0 ID=cds-WP_000949265.1;Parent=gene-AC00_RS10390;Dbxref=GenBank:WP_000949265.1;Name=WP_000949265.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=AC00_RS10390;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_000949265.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 23832 24155 . + . ID=gene-AC00_RS10385;Name=yfiM;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=AC00_RS10385;old_locus_tag=AC00_3001 NZ_JJLU01000091.1 Protein Homology CDS 23832 24155 . + 0 ID=cds-WP_001300818.1;Parent=gene-AC00_RS10385;Dbxref=GenBank:WP_001300818.1;Name=WP_001300818.1;gbkey=CDS;gene=yfiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417081.2;locus_tag=AC00_RS10385;product=YfiM family lipoprotein;protein_id=WP_001300818.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 24152 25450 . - . ID=gene-AC00_RS10380;Name=kgtP;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=AC00_RS10380;old_locus_tag=AC00_3002 NZ_JJLU01000091.1 Protein Homology CDS 24152 25450 . - 0 ID=cds-WP_000841103.1;Parent=gene-AC00_RS10380;Dbxref=GenBank:WP_000841103.1;Name=WP_000841103.1;gbkey=CDS;gene=kgtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417082.1;locus_tag=AC00_RS10380;product=alpha-ketoglutarate permease;protein_id=WP_000841103.1;transl_table=11 NZ_JJLU01000091.1 RefSeq gene 25775 25890 . - . ID=gene-AC00_RS10375;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS10375;old_locus_tag=AC00_3003 NZ_JJLU01000091.1 cmsearch rRNA 25775 25890 . - . ID=rna-AC00_RS10375;Parent=gene-AC00_RS10375;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS10375;product=5S ribosomal RNA NZ_JJLU01000091.1 cmsearch exon 25775 25890 . - . ID=exon-AC00_RS10375-1;Parent=rna-AC00_RS10375;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS10375;product=5S ribosomal RNA NZ_JJLU01000091.1 RefSeq gene 25985 28887 . - . ID=gene-AC00_RS10370;Name=AC00_RS10370;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS10370;old_locus_tag=AC00_3004 NZ_JJLU01000091.1 cmsearch rRNA 25985 28887 . - . ID=rna-AC00_RS10370;Parent=gene-AC00_RS10370;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS10370;product=23S ribosomal RNA NZ_JJLU01000091.1 cmsearch exon 25985 28887 . - . ID=exon-AC00_RS10370-1;Parent=rna-AC00_RS10370;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS10370;product=23S ribosomal RNA ##sequence-region NZ_JJLU01000092.1 1 4214 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000092.1 RefSeq region 1 4214 . + . ID=NZ_JJLU01000092.1:1..4214;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000092.1 RefSeq gene 100 855 . - . ID=gene-AC00_RS10365;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AC00_RS10365;old_locus_tag=AC00_3006 NZ_JJLU01000092.1 Protein Homology CDS 100 855 . - 0 ID=cds-WP_001282653.1-2;Parent=gene-AC00_RS10365;Dbxref=GenBank:WP_001282653.1;Name=WP_001282653.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282653.1;locus_tag=AC00_RS10365;product=IS21-like element ISSso4 family helper ATPase IstB;protein_id=WP_001282653.1;transl_table=11 NZ_JJLU01000092.1 RefSeq gene 872 2407 . - . ID=gene-AC00_RS10360;Name=istA;gbkey=Gene;gene=istA;gene_biotype=protein_coding;locus_tag=AC00_RS10360;old_locus_tag=AC00_3007 NZ_JJLU01000092.1 Protein Homology CDS 872 2407 . - 0 ID=cds-WP_021577119.1;Parent=gene-AC00_RS10360;Dbxref=GenBank:WP_021577119.1;Name=WP_021577119.1;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447023.1;locus_tag=AC00_RS10360;product=IS21 family transposase;protein_id=WP_021577119.1;transl_table=11 NZ_JJLU01000092.1 RefSeq pseudogene 2641 3108 . - . ID=gene-AC00_RS10355;Name=AC00_RS10355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS10355;old_locus_tag=AC00_3008;partial=true;pseudo=true;start_range=.,2641 NZ_JJLU01000092.1 Protein Homology CDS 2641 3108 . - 0 ID=cds-AC00_RS10355;Parent=gene-AC00_RS10355;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219394.1;locus_tag=AC00_RS10355;partial=true;product=IS110-like element ISShdy1 family transposase;pseudo=true;start_range=.,2641;transl_table=11 NZ_JJLU01000092.1 RefSeq pseudogene 3212 3430 . - . ID=gene-AC00_RS29705;Name=AC00_RS29705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29705;partial=true;pseudo=true;start_range=.,3212 NZ_JJLU01000092.1 Protein Homology CDS 3212 3430 . - 0 ID=cds-AC00_RS29705;Parent=gene-AC00_RS29705;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430945.1;locus_tag=AC00_RS29705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3212;transl_table=11 NZ_JJLU01000092.1 RefSeq gene 3507 4204 . + . ID=gene-AC00_RS0125230;Name=AC00_RS0125230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125230 NZ_JJLU01000092.1 Protein Homology CDS 3507 3756 . + 0 ID=cds-WP_240247879.1;Parent=gene-AC00_RS0125230;Dbxref=GenBank:WP_240247879.1;Name=WP_240247879.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS0125230;product=IS1 family transposase;protein_id=WP_240247879.1;transl_table=11 NZ_JJLU01000092.1 Protein Homology CDS 3756 4204 . + 2 ID=cds-WP_240247879.1;Parent=gene-AC00_RS0125230;Dbxref=GenBank:WP_240247879.1;Name=WP_240247879.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS0125230;product=IS1 family transposase;protein_id=WP_240247879.1;transl_table=11 ##sequence-region NZ_JJLU01000093.1 1 33841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000093.1 RefSeq region 1 33841 . + . ID=NZ_JJLU01000093.1:1..33841;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000093.1 RefSeq gene 1 992 . - . ID=gene-AC00_RS0125235;Name=AC00_RS0125235;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS0125235;partial=true;start_range=.,1 NZ_JJLU01000093.1 cmsearch rRNA 1 992 . - . ID=rna-AC00_RS0125235;Parent=gene-AC00_RS0125235;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125235;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000093.1 cmsearch exon 1 992 . - . ID=exon-AC00_RS0125235-1;Parent=rna-AC00_RS0125235;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125235;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000093.1 RefSeq gene 1436 4009 . - . ID=gene-AC00_RS10350;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AC00_RS10350;old_locus_tag=AC00_3011 NZ_JJLU01000093.1 Protein Homology CDS 1436 4009 . - 0 ID=cds-WP_001235102.1;Parent=gene-AC00_RS10350;Dbxref=GenBank:WP_001235102.1;Name=WP_001235102.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=AC00_RS10350;product=ATP-dependent chaperone ClpB;protein_id=WP_001235102.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 4139 4870 . - . ID=gene-AC00_RS10345;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=AC00_RS10345;old_locus_tag=AC00_3012 NZ_JJLU01000093.1 Protein Homology CDS 4139 4870 . - 0 ID=cds-WP_032281454.1;Parent=gene-AC00_RS10345;Dbxref=GenBank:WP_032281454.1;Name=WP_032281454.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311483.1;locus_tag=AC00_RS10345;product=purine nucleoside phosphorylase YfiH;protein_id=WP_032281454.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 4867 5847 . - . ID=gene-AC00_RS10340;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AC00_RS10340;old_locus_tag=AC00_3013 NZ_JJLU01000093.1 Protein Homology CDS 4867 5847 . - 0 ID=cds-WP_000079091.1;Parent=gene-AC00_RS10340;Dbxref=GenBank:WP_000079091.1;Name=WP_000079091.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=AC00_RS10340;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_000079091.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 5982 6719 . + . ID=gene-AC00_RS10335;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=AC00_RS10335;old_locus_tag=AC00_3014 NZ_JJLU01000093.1 Protein Homology CDS 5982 6719 . + 0 ID=cds-WP_000197686.1;Parent=gene-AC00_RS10335;Dbxref=GenBank:WP_000197686.1;Name=WP_000197686.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311485.1;locus_tag=AC00_RS10335;product=outer membrane protein assembly factor BamD;protein_id=WP_000197686.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 6990 7331 . + . ID=gene-AC00_RS10330;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=AC00_RS10330;old_locus_tag=AC00_3015 NZ_JJLU01000093.1 Protein Homology CDS 6990 7331 . + 0 ID=cds-WP_000178456.1;Parent=gene-AC00_RS10330;Dbxref=GenBank:WP_000178456.1;Name=WP_000178456.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=AC00_RS10330;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_000178456.1;transl_table=11 NZ_JJLU01000093.1 cmsearch sequence_feature 7434 7559 . + . ID=id-NZ_JJLU01000093.1:7434..7559;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLU01000093.1 RefSeq gene 7435 7482 . + . ID=gene-AC00_RS30455;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=AC00_RS30455 NZ_JJLU01000093.1 Protein Homology CDS 7435 7482 . + 0 ID=cds-WP_001386991.1;Parent=gene-AC00_RS30455;Dbxref=GenBank:WP_001386991.1;Name=WP_001386991.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311488.1;locus_tag=AC00_RS30455;product=pheA operon leader peptide PheL;protein_id=WP_001386991.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 7581 8741 . + . ID=gene-AC00_RS10325;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AC00_RS10325;old_locus_tag=AC00_3016 NZ_JJLU01000093.1 Protein Homology CDS 7581 8741 . + 0 ID=cds-WP_000200120.1;Parent=gene-AC00_RS10325;Dbxref=GenBank:WP_000200120.1;Name=WP_000200120.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311489.1;locus_tag=AC00_RS10325;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_000200120.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 8784 9905 . - . ID=gene-AC00_RS10320;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=AC00_RS10320;old_locus_tag=AC00_3017 NZ_JJLU01000093.1 Protein Homology CDS 8784 9905 . - 0 ID=cds-WP_000225204.1;Parent=gene-AC00_RS10320;Dbxref=GenBank:WP_000225204.1;Name=WP_000225204.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=AC00_RS10320;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_000225204.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 9916 10986 . - . ID=gene-AC00_RS10315;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=AC00_RS10315;old_locus_tag=AC00_3018 NZ_JJLU01000093.1 Protein Homology CDS 9916 10986 . - 0 ID=cds-WP_001168032.1;Parent=gene-AC00_RS10315;Dbxref=GenBank:WP_001168032.1;Name=WP_001168032.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311491.1;locus_tag=AC00_RS10315;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_001168032.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 11196 11561 . + . ID=gene-AC00_RS10310;Name=yfiL;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=AC00_RS10310;old_locus_tag=AC00_3019 NZ_JJLU01000093.1 Protein Homology CDS 11196 11561 . + 0 ID=cds-WP_000976004.1;Parent=gene-AC00_RS10310;Dbxref=GenBank:WP_000976004.1;Name=WP_000976004.1;gbkey=CDS;gene=yfiL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417093.2;locus_tag=AC00_RS10310;product=DUF2799 domain-containing protein;protein_id=WP_000976004.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 11711 12229 . + . ID=gene-AC00_RS10305;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=AC00_RS10305;old_locus_tag=AC00_3020 NZ_JJLU01000093.1 Protein Homology CDS 11711 12229 . + 0 ID=cds-WP_001212391.1;Parent=gene-AC00_RS10305;Dbxref=GenBank:WP_001212391.1;Name=WP_001212391.1;gbkey=CDS;gene=yfiR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311493.1;locus_tag=AC00_RS10305;product=YfiR family protein;protein_id=WP_001212391.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 12219 13445 . + . ID=gene-AC00_RS10300;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=AC00_RS10300;old_locus_tag=AC00_3021 NZ_JJLU01000093.1 Protein Homology CDS 12219 13445 . + 0 ID=cds-WP_074512180.1;Parent=gene-AC00_RS10300;Dbxref=GenBank:WP_074512180.1;Name=WP_074512180.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417095.1;locus_tag=AC00_RS10300;product=diguanylate cyclase DgcN;protein_id=WP_074512180.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 13461 13943 . + . ID=gene-AC00_RS0125245;Name=yfiB;gbkey=Gene;gene=yfiB;gene_biotype=protein_coding;locus_tag=AC00_RS0125245;old_locus_tag=AC00_3022 NZ_JJLU01000093.1 Protein Homology CDS 13461 13943 . + 0 ID=cds-WP_032281455.1;Parent=gene-AC00_RS0125245;Dbxref=GenBank:WP_032281455.1;Name=WP_032281455.1;gbkey=CDS;gene=yfiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311495.1;locus_tag=AC00_RS0125245;product=OmpA family protein;protein_id=WP_032281455.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 14020 14367 . - . ID=gene-AC00_RS10295;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AC00_RS10295;old_locus_tag=AC00_3023 NZ_JJLU01000093.1 Protein Homology CDS 14020 14367 . - 0 ID=cds-WP_000065253.1;Parent=gene-AC00_RS10295;Dbxref=GenBank:WP_000065253.1;Name=WP_000065253.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=AC00_RS10295;product=50S ribosomal protein L19;protein_id=WP_000065253.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 14409 15176 . - . ID=gene-AC00_RS10290;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AC00_RS10290;old_locus_tag=AC00_3024 NZ_JJLU01000093.1 Protein Homology CDS 14409 15176 . - 0 ID=cds-WP_000264777.1;Parent=gene-AC00_RS10290;Dbxref=GenBank:WP_000264777.1;Name=WP_000264777.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=AC00_RS10290;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_000264777.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 15207 15755 . - . ID=gene-AC00_RS10285;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AC00_RS10285;old_locus_tag=AC00_3025 NZ_JJLU01000093.1 Protein Homology CDS 15207 15755 . - 0 ID=cds-WP_000043335.1;Parent=gene-AC00_RS10285;Dbxref=GenBank:WP_000043335.1;Name=WP_000043335.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=AC00_RS10285;product=ribosome maturation factor RimM;protein_id=WP_000043335.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 15774 16022 . - . ID=gene-AC00_RS10280;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AC00_RS10280;old_locus_tag=AC00_3026 NZ_JJLU01000093.1 Protein Homology CDS 15774 16022 . - 0 ID=cds-WP_000256450.1;Parent=gene-AC00_RS10280;Dbxref=GenBank:WP_000256450.1;Name=WP_000256450.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=AC00_RS10280;product=30S ribosomal protein S16;protein_id=WP_000256450.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 16159 17520 . - . ID=gene-AC00_RS10275;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AC00_RS10275;old_locus_tag=AC00_3027 NZ_JJLU01000093.1 Protein Homology CDS 16159 17520 . - 0 ID=cds-WP_000460035.1;Parent=gene-AC00_RS10275;Dbxref=GenBank:WP_000460035.1;Name=WP_000460035.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=AC00_RS10275;product=signal recognition particle protein;protein_id=WP_000460035.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 17687 18478 . + . ID=gene-AC00_RS10270;Name=ypjD;gbkey=Gene;gene=ypjD;gene_biotype=protein_coding;locus_tag=AC00_RS10270;old_locus_tag=AC00_3028 NZ_JJLU01000093.1 Protein Homology CDS 17687 18478 . + 0 ID=cds-WP_001338897.1;Parent=gene-AC00_RS10270;Dbxref=GenBank:WP_001338897.1;Name=WP_001338897.1;Ontology_term=GO:0005886;gbkey=CDS;gene=ypjD;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417102.4;locus_tag=AC00_RS10270;product=cytochrome C assembly family protein;protein_id=WP_001338897.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 18499 19785 . + . ID=gene-AC00_RS10265;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=AC00_RS10265;old_locus_tag=AC00_3029 NZ_JJLU01000093.1 Protein Homology CDS 18499 19785 . + 0 ID=cds-WP_032149952.1;Parent=gene-AC00_RS10265;Dbxref=GenBank:WP_032149952.1;Name=WP_032149952.1;gbkey=CDS;gene=yfjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=AC00_RS10265;product=HlyC/CorC family transporter;protein_id=WP_032149952.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 19840 20433 . - . ID=gene-AC00_RS10260;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AC00_RS10260;old_locus_tag=AC00_3030 NZ_JJLU01000093.1 Protein Homology CDS 19840 20433 . - 0 ID=cds-WP_001296310.1;Parent=gene-AC00_RS10260;Dbxref=GenBank:WP_001296310.1;Name=WP_001296310.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=AC00_RS10260;product=nucleotide exchange factor GrpE;protein_id=WP_001296310.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 20556 21434 . + . ID=gene-AC00_RS10250;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=AC00_RS10250;old_locus_tag=AC00_3032 NZ_JJLU01000093.1 Protein Homology CDS 20556 21434 . + 0 ID=cds-WP_032281456.1;Parent=gene-AC00_RS10250;Dbxref=GenBank:WP_032281456.1;Name=WP_032281456.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=AC00_RS10250;product=NAD(+) kinase;protein_id=WP_032281456.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 21520 23181 . + . ID=gene-AC00_RS10245;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=AC00_RS10245;old_locus_tag=AC00_3033 NZ_JJLU01000093.1 Protein Homology CDS 21520 23181 . + 0 ID=cds-WP_032288270.1;Parent=gene-AC00_RS10245;Dbxref=GenBank:WP_032288270.1;Name=WP_032288270.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311505.1;locus_tag=AC00_RS10245;product=DNA repair protein RecN;protein_id=WP_032288270.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 23330 23671 . + . ID=gene-AC00_RS10240;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=AC00_RS10240;old_locus_tag=AC00_3034 NZ_JJLU01000093.1 Protein Homology CDS 23330 23671 . + 0 ID=cds-WP_001203437.1;Parent=gene-AC00_RS10240;Dbxref=GenBank:WP_001203437.1;Name=WP_001203437.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417107.2;locus_tag=AC00_RS10240;product=outer membrane protein assembly factor BamE;protein_id=WP_001203437.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 23733 24023 . - . ID=gene-AC00_RS10235;Name=yfjF;gbkey=Gene;gene=yfjF;gene_biotype=protein_coding;locus_tag=AC00_RS10235;old_locus_tag=AC00_3035 NZ_JJLU01000093.1 Protein Homology CDS 23733 24023 . - 0 ID=cds-WP_001117838.1;Parent=gene-AC00_RS10235;Dbxref=GenBank:WP_001117838.1;Name=WP_001117838.1;gbkey=CDS;gene=yfjF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417108.4;locus_tag=AC00_RS10235;product=RnfH family protein;protein_id=WP_001117838.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 24013 24450 . - . ID=gene-AC00_RS10230;Name=ratA;gbkey=Gene;gene=ratA;gene_biotype=protein_coding;locus_tag=AC00_RS10230;old_locus_tag=AC00_3036 NZ_JJLU01000093.1 Protein Homology CDS 24013 24450 . - 0 ID=cds-WP_001341638.1;Parent=gene-AC00_RS10230;Dbxref=GenBank:WP_001341638.1;Name=WP_001341638.1;gbkey=CDS;gene=ratA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376629.1;locus_tag=AC00_RS10230;product=type II toxin-antitoxin system toxin RatA;protein_id=WP_001341638.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 24621 25103 . + . ID=gene-AC00_RS10225;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AC00_RS10225;old_locus_tag=AC00_3037 NZ_JJLU01000093.1 Protein Homology CDS 24621 25103 . + 0 ID=cds-WP_000162574.1;Parent=gene-AC00_RS10225;Dbxref=GenBank:WP_000162574.1;Name=WP_000162574.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=AC00_RS10225;product=SsrA-binding protein SmpB;protein_id=WP_000162574.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 25318 25680 . + . ID=gene-AC00_RS26775;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AC00_RS26775 NZ_JJLU01000093.1 cmsearch tmRNA 25318 25680 . + . ID=rna-AC00_RS26775;Parent=gene-AC00_RS26775;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26775;product=transfer-messenger RNA NZ_JJLU01000093.1 cmsearch exon 25318 25680 . + . ID=exon-AC00_RS26775-1;Parent=rna-AC00_RS26775;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26775;product=transfer-messenger RNA NZ_JJLU01000093.1 RefSeq gene 25797 26012 . - . ID=gene-AC00_RS10220;Name=AC00_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10220;old_locus_tag=AC00_3038 NZ_JJLU01000093.1 Protein Homology CDS 25797 26012 . - 0 ID=cds-WP_032281459.1;Parent=gene-AC00_RS10220;Dbxref=GenBank:WP_032281459.1;Name=WP_032281459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016760.1;locus_tag=AC00_RS10220;product=ogr/Delta-like zinc finger family protein;protein_id=WP_032281459.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 26084 27181 . - . ID=gene-AC00_RS10215;Name=AC00_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10215;old_locus_tag=AC00_3039 NZ_JJLU01000093.1 Protein Homology CDS 26084 27181 . - 0 ID=cds-WP_032281460.1;Parent=gene-AC00_RS10215;Dbxref=GenBank:WP_032281460.1;Name=WP_032281460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=AC00_RS10215;product=phage late control D family protein;protein_id=WP_032281460.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 27178 27663 . - . ID=gene-AC00_RS10210;Name=AC00_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10210;old_locus_tag=AC00_3040 NZ_JJLU01000093.1 Protein Homology CDS 27178 27663 . - 0 ID=cds-WP_032281461.1;Parent=gene-AC00_RS10210;Dbxref=GenBank:WP_032281461.1;Name=WP_032281461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226049.1;locus_tag=AC00_RS10210;product=phage tail protein;protein_id=WP_032281461.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 27660 30455 . - . ID=gene-AC00_RS10205;Name=AC00_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10205;old_locus_tag=AC00_3041 NZ_JJLU01000093.1 Protein Homology CDS 27660 30455 . - 0 ID=cds-WP_032288271.1;Parent=gene-AC00_RS10205;Dbxref=GenBank:WP_032288271.1;Name=WP_032288271.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282780.1;locus_tag=AC00_RS10205;product=phage tail tape measure protein;protein_id=WP_032288271.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 30445 30567 . - . ID=gene-AC00_RS28005;Name=AC00_RS28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28005;old_locus_tag=AC00_3042 NZ_JJLU01000093.1 Protein Homology CDS 30445 30567 . - 0 ID=cds-WP_032300013.1;Parent=gene-AC00_RS28005;Dbxref=GenBank:WP_032300013.1;Name=WP_032300013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461626.1;locus_tag=AC00_RS28005;product=GpE family phage tail protein;protein_id=WP_032300013.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 30582 30884 . - . ID=gene-AC00_RS10200;Name=AC00_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10200;old_locus_tag=AC00_3043 NZ_JJLU01000093.1 Protein Homology CDS 30582 30884 . - 0 ID=cds-WP_032281463.1;Parent=gene-AC00_RS10200;Dbxref=GenBank:WP_032281463.1;Name=WP_032281463.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=AC00_RS10200;product=phage tail assembly protein;protein_id=WP_032281463.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 30934 31449 . - . ID=gene-AC00_RS10195;Name=AC00_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10195;old_locus_tag=AC00_3044 NZ_JJLU01000093.1 Protein Homology CDS 30934 31449 . - 0 ID=cds-WP_032281464.1;Parent=gene-AC00_RS10195;Dbxref=GenBank:WP_032281464.1;Name=WP_032281464.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=AC00_RS10195;product=phage major tail tube protein;protein_id=WP_032281464.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 31459 32631 . - . ID=gene-AC00_RS10190;Name=AC00_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10190;old_locus_tag=AC00_3045 NZ_JJLU01000093.1 Protein Homology CDS 31459 32631 . - 0 ID=cds-WP_032281465.1;Parent=gene-AC00_RS10190;Dbxref=GenBank:WP_032281465.1;Name=WP_032281465.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226043.1;locus_tag=AC00_RS10190;product=phage tail sheath protein;protein_id=WP_032281465.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 32734 33291 . - . ID=gene-AC00_RS10185;Name=AC00_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10185;old_locus_tag=AC00_3046 NZ_JJLU01000093.1 Protein Homology CDS 32734 33291 . - 0 ID=cds-WP_032282131.1;Parent=gene-AC00_RS10185;Dbxref=GenBank:WP_032282131.1;Name=WP_032282131.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195984.1;locus_tag=AC00_RS10185;product=recombinase family protein;protein_id=WP_032282131.1;transl_table=11 NZ_JJLU01000093.1 RefSeq gene 33344 33736 . - . ID=gene-AC00_RS10180;Name=AC00_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10180;old_locus_tag=AC00_3047 NZ_JJLU01000093.1 GeneMarkS-2+ CDS 33344 33736 . - 0 ID=cds-WP_032282135.1;Parent=gene-AC00_RS10180;Dbxref=GenBank:WP_032282135.1;Name=WP_032282135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS10180;product=hypothetical protein;protein_id=WP_032282135.1;transl_table=11 ##sequence-region NZ_JJLU01000094.1 1 4992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000094.1 RefSeq region 1 4992 . + . ID=NZ_JJLU01000094.1:1..4992;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000094.1 RefSeq pseudogene 1 284 . + . ID=gene-AC00_RS10175;Name=AC00_RS10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS10175;old_locus_tag=AC00_3048;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000094.1 Protein Homology CDS 1 284 . + 2 ID=cds-AC00_RS10175;Parent=gene-AC00_RS10175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS10175;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000094.1 RefSeq gene 758 1711 . + . ID=gene-AC00_RS10170;Name=ompT;gbkey=Gene;gene=ompT;gene_biotype=protein_coding;locus_tag=AC00_RS10170;old_locus_tag=AC00_3049 NZ_JJLU01000094.1 Protein Homology CDS 758 1711 . + 0 ID=cds-WP_032282090.1;Parent=gene-AC00_RS10170;Dbxref=GenBank:WP_032282090.1;Name=WP_032282090.1;gbkey=CDS;gene=ompT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415097.1;locus_tag=AC00_RS10170;product=omptin family outer membrane protease OmpT;protein_id=WP_032282090.1;transl_table=11 NZ_JJLU01000094.1 RefSeq gene 1961 2710 . - . ID=gene-AC00_RS10165;Name=appY;gbkey=Gene;gene=appY;gene_biotype=protein_coding;locus_tag=AC00_RS10165;old_locus_tag=AC00_3050 NZ_JJLU01000094.1 Protein Homology CDS 1961 2710 . - 0 ID=cds-WP_000386784.1;Parent=gene-AC00_RS10165;Dbxref=GenBank:WP_000386784.1;Name=WP_000386784.1;gbkey=CDS;gene=appY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415096.1;locus_tag=AC00_RS10165;product=DNA-binding transcriptional activator AppY;protein_id=WP_000386784.1;transl_table=11 NZ_JJLU01000094.1 RefSeq pseudogene 3256 3423 . - . ID=gene-AC00_RS31290;Name=AC00_RS31290;end_range=3423,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31290;partial=true;pseudo=true NZ_JJLU01000094.1 Protein Homology CDS 3256 3423 . - 0 ID=cds-AC00_RS31290;Parent=gene-AC00_RS31290;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3423,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415891.1;locus_tag=AC00_RS31290;partial=true;product=tail fiber assembly protein;pseudo=true;transl_table=11 NZ_JJLU01000094.1 RefSeq gene 3573 4241 . + . ID=gene-AC00_RS0125255;Name=AC00_RS0125255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125255 NZ_JJLU01000094.1 Protein Homology CDS 3573 4241 . + 0 ID=cds-WP_023148666.1;Parent=gene-AC00_RS0125255;Dbxref=GenBank:WP_023148666.1;Name=WP_023148666.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707858.1;locus_tag=AC00_RS0125255;product=class I SAM-dependent methyltransferase;protein_id=WP_023148666.1;transl_table=11 NZ_JJLU01000094.1 RefSeq gene 4296 4880 . - . ID=gene-AC00_RS10160;Name=AC00_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10160;old_locus_tag=AC00_3053 NZ_JJLU01000094.1 Protein Homology CDS 4296 4880 . - 0 ID=cds-WP_024170600.1;Parent=gene-AC00_RS10160;Dbxref=GenBank:WP_024170600.1;Name=WP_024170600.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885581.1;locus_tag=AC00_RS10160;product=tail fiber assembly protein;protein_id=WP_024170600.1;transl_table=11 NZ_JJLU01000094.1 RefSeq pseudogene 4880 4992 . - . ID=gene-AC00_RS31295;Name=AC00_RS31295;end_range=4992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31295;old_locus_tag=AC00_3054;partial=true;pseudo=true NZ_JJLU01000094.1 Protein Homology CDS 4880 4992 . - 2 ID=cds-AC00_RS31295;Parent=gene-AC00_RS31295;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4992,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309677.1;locus_tag=AC00_RS31295;partial=true;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000095.1 1 90751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000095.1 RefSeq region 1 90751 . + . ID=NZ_JJLU01000095.1:1..90751;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000095.1 RefSeq pseudogene 1 305 . + . ID=gene-AC00_RS10155;Name=AC00_RS10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS10155;old_locus_tag=AC00_3055;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000095.1 Protein Homology CDS 1 305 . + 2 ID=cds-AC00_RS10155;Parent=gene-AC00_RS10155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS10155;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 542 2794 . + . ID=gene-AC00_RS10150;Name=AC00_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10150;old_locus_tag=AC00_3056 NZ_JJLU01000095.1 Protein Homology CDS 542 2794 . + 0 ID=cds-WP_032281467.1;Parent=gene-AC00_RS10150;Dbxref=GenBank:WP_032281467.1;Name=WP_032281467.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439272.1;locus_tag=AC00_RS10150;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_032281467.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 3130 4107 . + . ID=gene-AC00_RS10145;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=AC00_RS10145;old_locus_tag=AC00_3057 NZ_JJLU01000095.1 Protein Homology CDS 3130 4107 . + 0 ID=cds-WP_032281468.1;Parent=gene-AC00_RS10145;Dbxref=GenBank:WP_032281468.1;Name=WP_032281468.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311547.2;locus_tag=AC00_RS10145;product=glutarate dioxygenase GlaH;protein_id=WP_032281468.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 4127 5395 . + . ID=gene-AC00_RS10140;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=AC00_RS10140;old_locus_tag=AC00_3058 NZ_JJLU01000095.1 Protein Homology CDS 4127 5395 . + 0 ID=cds-WP_001613643.1;Parent=gene-AC00_RS10140;Dbxref=GenBank:WP_001613643.1;Name=WP_001613643.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311548.2;locus_tag=AC00_RS10140;product=L-2-hydroxyglutarate oxidase;protein_id=WP_001613643.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 5418 6866 . + . ID=gene-AC00_RS10135;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=AC00_RS10135;old_locus_tag=AC00_3059 NZ_JJLU01000095.1 Protein Homology CDS 5418 6866 . + 0 ID=cds-WP_032288273.1;Parent=gene-AC00_RS10135;Dbxref=GenBank:WP_032288273.1;Name=WP_032288273.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311549.1;locus_tag=AC00_RS10135;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_032288273.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 6880 8160 . + . ID=gene-AC00_RS10130;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=AC00_RS10130;old_locus_tag=AC00_3060 NZ_JJLU01000095.1 Protein Homology CDS 6880 8160 . + 0 ID=cds-WP_032288274.1;Parent=gene-AC00_RS10130;Dbxref=GenBank:WP_032288274.1;Name=WP_032288274.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;gene=gabT;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311550.1;locus_tag=AC00_RS10130;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032288274.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 8758 10158 . + . ID=gene-AC00_RS10125;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=AC00_RS10125;old_locus_tag=AC00_3061 NZ_JJLU01000095.1 Protein Homology CDS 8758 10158 . + 0 ID=cds-WP_032281471.1;Parent=gene-AC00_RS10125;Dbxref=GenBank:WP_032281471.1;Name=WP_032281471.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311551.1;locus_tag=AC00_RS10125;product=GABA permease;protein_id=WP_032281471.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 10179 10841 . + . ID=gene-AC00_RS10120;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=AC00_RS10120;old_locus_tag=AC00_3062 NZ_JJLU01000095.1 Protein Homology CDS 10179 10841 . + 0 ID=cds-WP_000156821.1;Parent=gene-AC00_RS10120;Dbxref=GenBank:WP_000156821.1;Name=WP_000156821.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311552.2;locus_tag=AC00_RS10120;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_000156821.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 10842 11291 . - . ID=gene-AC00_RS10115;Name=kbp;gbkey=Gene;gene=kbp;gene_biotype=protein_coding;locus_tag=AC00_RS10115;old_locus_tag=AC00_3063 NZ_JJLU01000095.1 Protein Homology CDS 10842 11291 . - 0 ID=cds-WP_000522415.1;Parent=gene-AC00_RS10115;Dbxref=GenBank:WP_000522415.1;Name=WP_000522415.1;gbkey=CDS;gene=kbp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417151.1;locus_tag=AC00_RS10115;product=potassium binding protein Kbp;protein_id=WP_000522415.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 11375 11533 . - . ID=gene-AC00_RS10110;Name=yqaE;gbkey=Gene;gene=yqaE;gene_biotype=protein_coding;locus_tag=AC00_RS10110;old_locus_tag=AC00_3064 NZ_JJLU01000095.1 Protein Homology CDS 11375 11533 . - 0 ID=cds-WP_032281472.1;Parent=gene-AC00_RS10110;Dbxref=GenBank:WP_032281472.1;Name=WP_032281472.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqaE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311554.1;locus_tag=AC00_RS10110;product=YqaE/Pmp3 family membrane protein;protein_id=WP_032281472.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 11716 12015 . + . ID=gene-AC00_RS10105;Name=ygaV;gbkey=Gene;gene=ygaV;gene_biotype=protein_coding;locus_tag=AC00_RS10105;old_locus_tag=AC00_3065 NZ_JJLU01000095.1 Protein Homology CDS 11716 12015 . + 0 ID=cds-WP_000137282.1;Parent=gene-AC00_RS10105;Dbxref=GenBank:WP_000137282.1;Name=WP_000137282.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=ygaV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311555.1;locus_tag=AC00_RS10105;product=ArsR/SmtB family transcription factor;protein_id=WP_000137282.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 12025 12543 . + . ID=gene-AC00_RS10100;Name=ygaP;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=AC00_RS10100;old_locus_tag=AC00_3066 NZ_JJLU01000095.1 Protein Homology CDS 12025 12543 . + 0 ID=cds-WP_032281473.1;Parent=gene-AC00_RS10100;Dbxref=GenBank:WP_032281473.1;Name=WP_032281473.1;gbkey=CDS;gene=ygaP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311556.1;locus_tag=AC00_RS10100;product=thiosulfate sulfurtransferase YgaP;protein_id=WP_032281473.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 12596 13000 . - . ID=gene-AC00_RS10095;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=AC00_RS10095;old_locus_tag=AC00_3067 NZ_JJLU01000095.1 Protein Homology CDS 12596 13000 . - 0 ID=cds-WP_000115383.1;Parent=gene-AC00_RS10095;Dbxref=GenBank:WP_000115383.1;Name=WP_000115383.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311557.1;locus_tag=AC00_RS10095;product=DNA-binding protein StpA;protein_id=WP_000115383.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 13668 14117 . + . ID=gene-AC00_RS10090;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=AC00_RS10090;old_locus_tag=AC00_3068 NZ_JJLU01000095.1 Protein Homology CDS 13668 14117 . + 0 ID=cds-WP_000492656.1;Parent=gene-AC00_RS10090;Dbxref=GenBank:WP_000492656.1;Name=WP_000492656.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311558.1;locus_tag=AC00_RS10090;product=L-alanine exporter AlaE;protein_id=WP_000492656.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 14154 14498 . - . ID=gene-AC00_RS10085;Name=ygaC;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=AC00_RS10085;old_locus_tag=AC00_3069 NZ_JJLU01000095.1 Protein Homology CDS 14154 14498 . - 0 ID=cds-WP_000281320.1;Parent=gene-AC00_RS10085;Dbxref=GenBank:WP_000281320.1;Name=WP_000281320.1;gbkey=CDS;gene=ygaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311559.1;locus_tag=AC00_RS10085;product=DUF2002 family protein;protein_id=WP_000281320.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 14650 14979 . + . ID=gene-AC00_RS10080;Name=ygaM;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=AC00_RS10080;old_locus_tag=AC00_3070 NZ_JJLU01000095.1 Protein Homology CDS 14650 14979 . + 0 ID=cds-WP_032281474.1;Parent=gene-AC00_RS10080;Dbxref=GenBank:WP_032281474.1;Name=WP_032281474.1;gbkey=CDS;gene=ygaM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311560.2;locus_tag=AC00_RS10080;product=DUF883 domain-containing protein;protein_id=WP_032281474.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 15129 16463 . - . ID=gene-AC00_RS10075;Name=AC00_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10075;old_locus_tag=AC00_3071 NZ_JJLU01000095.1 Protein Homology CDS 15129 16463 . - 0 ID=cds-WP_032281475.1;Parent=gene-AC00_RS10075;Dbxref=GenBank:WP_032281475.1;Name=WP_032281475.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311561.1;locus_tag=AC00_RS10075;product=PLP-dependent aminotransferase family protein;protein_id=WP_032281475.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 16551 16982 . + . ID=gene-AC00_RS10070;Name=AC00_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10070;old_locus_tag=AC00_3072 NZ_JJLU01000095.1 Protein Homology CDS 16551 16982 . + 0 ID=cds-WP_000209792.1;Parent=gene-AC00_RS10070;Dbxref=GenBank:WP_000209792.1;Name=WP_000209792.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311562.1;locus_tag=AC00_RS10070;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209792.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 17191 17436 . + . ID=gene-AC00_RS10065;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AC00_RS10065;old_locus_tag=AC00_3073 NZ_JJLU01000095.1 Protein Homology CDS 17191 17436 . + 0 ID=cds-WP_001223223.1;Parent=gene-AC00_RS10065;Dbxref=GenBank:WP_001223223.1;Name=WP_001223223.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AC00_RS10065;product=glutaredoxin-like protein NrdH;protein_id=WP_001223223.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 17433 17843 . + . ID=gene-AC00_RS10060;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AC00_RS10060;old_locus_tag=AC00_3074 NZ_JJLU01000095.1 Protein Homology CDS 17433 17843 . + 0 ID=cds-WP_001739568.1;Parent=gene-AC00_RS10060;Dbxref=GenBank:WP_001739568.1;Name=WP_001739568.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AC00_RS10060;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001739568.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 17816 19960 . + . ID=gene-AC00_RS10055;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=AC00_RS10055;old_locus_tag=AC00_3075 NZ_JJLU01000095.1 Protein Homology CDS 17816 19960 . + 0 ID=cds-WP_032281476.1;Parent=gene-AC00_RS10055;Dbxref=GenBank:WP_032281476.1;Name=WP_032281476.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AC00_RS10055;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_032281476.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 19970 20929 . + . ID=gene-AC00_RS10050;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=AC00_RS10050;old_locus_tag=AC00_3076 NZ_JJLU01000095.1 Protein Homology CDS 19970 20929 . + 0 ID=cds-WP_032281477.1;Parent=gene-AC00_RS10050;Dbxref=GenBank:WP_032281477.1;Name=WP_032281477.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417162.1;locus_tag=AC00_RS10050;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_032281477.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 21285 22487 . + . ID=gene-AC00_RS10045;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=AC00_RS10045;old_locus_tag=AC00_3077 NZ_JJLU01000095.1 Protein Homology CDS 21285 22487 . + 0 ID=cds-WP_000985483.1;Parent=gene-AC00_RS10045;Dbxref=GenBank:WP_000985483.1;Name=WP_000985483.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417163.1;locus_tag=AC00_RS10045;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_000985483.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 22480 23544 . + . ID=gene-AC00_RS10040;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=AC00_RS10040;old_locus_tag=AC00_3078 NZ_JJLU01000095.1 Protein Homology CDS 22480 23544 . + 0 ID=cds-WP_032281478.1;Parent=gene-AC00_RS10040;Dbxref=GenBank:WP_032281478.1;Name=WP_032281478.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=AC00_RS10040;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_032281478.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 23601 24593 . + . ID=gene-AC00_RS10035;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=AC00_RS10035;old_locus_tag=AC00_3079 NZ_JJLU01000095.1 Protein Homology CDS 23601 24593 . + 0 ID=cds-WP_001216525.1;Parent=gene-AC00_RS10035;Dbxref=GenBank:WP_001216525.1;Name=WP_001216525.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311569.1;locus_tag=AC00_RS10035;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_001216525.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 24785 25969 . + . ID=gene-AC00_RS10030;Name=AC00_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10030;old_locus_tag=AC00_3081 NZ_JJLU01000095.1 Protein Homology CDS 24785 25969 . + 0 ID=cds-WP_032281479.1;Parent=gene-AC00_RS10030;Dbxref=GenBank:WP_032281479.1;Name=WP_032281479.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311570.1;locus_tag=AC00_RS10030;product=MFS transporter;protein_id=WP_032281479.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 26093 26830 . + . ID=gene-AC00_RS10025;Name=ygaZ;gbkey=Gene;gene=ygaZ;gene_biotype=protein_coding;locus_tag=AC00_RS10025;old_locus_tag=AC00_3082 NZ_JJLU01000095.1 Protein Homology CDS 26093 26830 . + 0 ID=cds-WP_000445658.1;Parent=gene-AC00_RS10025;Dbxref=GenBank:WP_000445658.1;Name=WP_000445658.1;gbkey=CDS;gene=ygaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311571.1;locus_tag=AC00_RS10025;product=L-valine exporter subunit YgaZ;protein_id=WP_000445658.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 26820 27155 . + . ID=gene-AC00_RS10020;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=AC00_RS10020;old_locus_tag=AC00_3083 NZ_JJLU01000095.1 Protein Homology CDS 26820 27155 . + 0 ID=cds-WP_000119749.1;Parent=gene-AC00_RS10020;Dbxref=GenBank:WP_000119749.1;Name=WP_000119749.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311572.1;locus_tag=AC00_RS10020;product=L-valine transporter subunit YgaH;protein_id=WP_000119749.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 27246 27776 . + . ID=gene-AC00_RS10015;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=AC00_RS10015;old_locus_tag=AC00_3084 NZ_JJLU01000095.1 Protein Homology CDS 27246 27776 . + 0 ID=cds-WP_000378442.1;Parent=gene-AC00_RS10015;Dbxref=GenBank:WP_000378442.1;Name=WP_000378442.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311573.1;locus_tag=AC00_RS10015;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_000378442.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 27903 29075 . + . ID=gene-AC00_RS10010;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=AC00_RS10010;old_locus_tag=AC00_3086 NZ_JJLU01000095.1 Protein Homology CDS 27903 29075 . + 0 ID=cds-WP_032281480.1;Parent=gene-AC00_RS10010;Dbxref=GenBank:WP_032281480.1;Name=WP_032281480.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311574.1;locus_tag=AC00_RS10010;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_032281480.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 29092 30630 . + . ID=gene-AC00_RS10005;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AC00_RS10005;old_locus_tag=AC00_3087 NZ_JJLU01000095.1 Protein Homology CDS 29092 30630 . + 0 ID=cds-WP_001295176.1;Parent=gene-AC00_RS10005;Dbxref=GenBank:WP_001295176.1;Name=WP_001295176.1;gbkey=CDS;gene=emrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311575.1;locus_tag=AC00_RS10005;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_001295176.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 30888 31595 . + . ID=gene-AC00_RS10000;Name=AC00_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS10000;old_locus_tag=AC00_3088 NZ_JJLU01000095.1 Protein Homology CDS 30888 31595 . + 0 ID=cds-WP_001095979.1;Parent=gene-AC00_RS10000;Dbxref=GenBank:WP_001095979.1;Name=WP_001095979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001613653.1;locus_tag=AC00_RS10000;product=RNA ligase family protein;protein_id=WP_001095979.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 31592 32704 . + . ID=gene-AC00_RS09995;Name=AC00_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09995;old_locus_tag=AC00_3089 NZ_JJLU01000095.1 Protein Homology CDS 31592 32704 . + 0 ID=cds-WP_032288275.1;Parent=gene-AC00_RS09995;Dbxref=GenBank:WP_032288275.1;Name=WP_032288275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625743.1;locus_tag=AC00_RS09995;product=ATP-binding protein;protein_id=WP_032288275.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 32753 33268 . - . ID=gene-AC00_RS09990;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=AC00_RS09990;old_locus_tag=AC00_3090 NZ_JJLU01000095.1 Protein Homology CDS 32753 33268 . - 0 ID=cds-WP_001130211.1;Parent=gene-AC00_RS09990;Dbxref=GenBank:WP_001130211.1;Name=WP_001130211.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=AC00_RS09990;product=S-ribosylhomocysteine lyase;protein_id=WP_001130211.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 33418 34974 . - . ID=gene-AC00_RS09985;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AC00_RS09985;old_locus_tag=AC00_3091 NZ_JJLU01000095.1 Protein Homology CDS 33418 34974 . - 0 ID=cds-WP_000611804.1;Parent=gene-AC00_RS09985;Dbxref=GenBank:WP_000611804.1;Name=WP_000611804.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417173.1;locus_tag=AC00_RS09985;product=glutamate--cysteine ligase;protein_id=WP_000611804.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 35047 35475 . - . ID=gene-AC00_RS09980;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=AC00_RS09980;old_locus_tag=AC00_3092 NZ_JJLU01000095.1 Protein Homology CDS 35047 35475 . - 0 ID=cds-WP_001287454.1;Parent=gene-AC00_RS09980;Dbxref=GenBank:WP_001287454.1;Name=WP_001287454.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqaA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=AC00_RS09980;product=YqaA family protein;protein_id=WP_001287454.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 35472 36038 . - . ID=gene-AC00_RS09975;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=AC00_RS09975;old_locus_tag=AC00_3093 NZ_JJLU01000095.1 Protein Homology CDS 35472 36038 . - 0 ID=cds-WP_032281482.1;Parent=gene-AC00_RS09975;Dbxref=GenBank:WP_032281482.1;Name=WP_032281482.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311579.1;locus_tag=AC00_RS09975;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_032281482.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 36319 36395 . - . ID=gene-AC00_RS09970;Name=AC00_RS09970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09970;old_locus_tag=AC00_3094 NZ_JJLU01000095.1 tRNAscan-SE tRNA 36319 36395 . - . ID=rna-AC00_RS09970;Parent=gene-AC00_RS09970;anticodon=(pos:complement(36359..36361));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09970;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 36319 36395 . - . ID=exon-AC00_RS09970-1;Parent=rna-AC00_RS09970;anticodon=(pos:complement(36359..36361));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09970;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 36498 36574 . - . ID=gene-AC00_RS09965;Name=AC00_RS09965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09965;old_locus_tag=AC00_3095 NZ_JJLU01000095.1 tRNAscan-SE tRNA 36498 36574 . - . ID=rna-AC00_RS09965;Parent=gene-AC00_RS09965;anticodon=(pos:complement(36538..36540));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09965;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 36498 36574 . - . ID=exon-AC00_RS09965-1;Parent=rna-AC00_RS09965;anticodon=(pos:complement(36538..36540));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09965;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 36677 36753 . - . ID=gene-AC00_RS09960;Name=AC00_RS09960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09960;old_locus_tag=AC00_3096 NZ_JJLU01000095.1 tRNAscan-SE tRNA 36677 36753 . - . ID=rna-AC00_RS09960;Parent=gene-AC00_RS09960;anticodon=(pos:complement(36717..36719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09960;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 36677 36753 . - . ID=exon-AC00_RS09960-1;Parent=rna-AC00_RS09960;anticodon=(pos:complement(36717..36719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09960;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 36816 36892 . - . ID=gene-AC00_RS09955;Name=AC00_RS09955;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09955;old_locus_tag=AC00_3097 NZ_JJLU01000095.1 tRNAscan-SE tRNA 36816 36892 . - . ID=rna-AC00_RS09955;Parent=gene-AC00_RS09955;anticodon=(pos:complement(36856..36858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09955;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 36816 36892 . - . ID=exon-AC00_RS09955-1;Parent=rna-AC00_RS09955;anticodon=(pos:complement(36856..36858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09955;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 36955 37031 . - . ID=gene-AC00_RS09950;Name=AC00_RS09950;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09950;old_locus_tag=AC00_3098 NZ_JJLU01000095.1 tRNAscan-SE tRNA 36955 37031 . - . ID=rna-AC00_RS09950;Parent=gene-AC00_RS09950;anticodon=(pos:complement(36995..36997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09950;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 36955 37031 . - . ID=exon-AC00_RS09950-1;Parent=rna-AC00_RS09950;anticodon=(pos:complement(36995..36997));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09950;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 37094 37170 . - . ID=gene-AC00_RS09945;Name=AC00_RS09945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09945;old_locus_tag=AC00_3099 NZ_JJLU01000095.1 tRNAscan-SE tRNA 37094 37170 . - . ID=rna-AC00_RS09945;Parent=gene-AC00_RS09945;anticodon=(pos:complement(37134..37136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09945;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 37094 37170 . - . ID=exon-AC00_RS09945-1;Parent=rna-AC00_RS09945;anticodon=(pos:complement(37134..37136));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09945;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 37370 37446 . - . ID=gene-AC00_RS09940;Name=AC00_RS09940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09940;old_locus_tag=AC00_3100 NZ_JJLU01000095.1 tRNAscan-SE tRNA 37370 37446 . - . ID=rna-AC00_RS09940;Parent=gene-AC00_RS09940;anticodon=(pos:complement(37410..37412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09940;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 37370 37446 . - . ID=exon-AC00_RS09940-1;Parent=rna-AC00_RS09940;anticodon=(pos:complement(37410..37412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09940;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 37646 37722 . - . ID=gene-AC00_RS09935;Name=AC00_RS09935;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09935;old_locus_tag=AC00_3101 NZ_JJLU01000095.1 tRNAscan-SE tRNA 37646 37722 . - . ID=rna-AC00_RS09935;Parent=gene-AC00_RS09935;anticodon=(pos:complement(37686..37688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09935;product=tRNA-Arg NZ_JJLU01000095.1 tRNAscan-SE exon 37646 37722 . - . ID=exon-AC00_RS09935-1;Parent=rna-AC00_RS09935;anticodon=(pos:complement(37686..37688));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09935;product=tRNA-Arg NZ_JJLU01000095.1 RefSeq gene 37726 37818 . - . ID=gene-AC00_RS09930;Name=AC00_RS09930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09930;old_locus_tag=AC00_3102 NZ_JJLU01000095.1 tRNAscan-SE tRNA 37726 37818 . - . ID=rna-AC00_RS09930;Parent=gene-AC00_RS09930;anticodon=(pos:complement(37782..37784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09930;product=tRNA-Ser NZ_JJLU01000095.1 tRNAscan-SE exon 37726 37818 . - . ID=exon-AC00_RS09930-1;Parent=rna-AC00_RS09930;anticodon=(pos:complement(37782..37784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09930;product=tRNA-Ser NZ_JJLU01000095.1 RefSeq gene 38135 38320 . - . ID=gene-AC00_RS09925;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=AC00_RS09925;old_locus_tag=AC00_3103 NZ_JJLU01000095.1 Protein Homology CDS 38135 38320 . - 0 ID=cds-WP_000906486.1;Parent=gene-AC00_RS09925;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=AC00_RS09925;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 38555 41185 . - . ID=gene-AC00_RS09920;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AC00_RS09920;old_locus_tag=AC00_3105 NZ_JJLU01000095.1 Protein Homology CDS 38555 41185 . - 0 ID=cds-WP_000047170.1;Parent=gene-AC00_RS09920;Dbxref=GenBank:WP_000047170.1;Name=WP_000047170.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311581.1;locus_tag=AC00_RS09920;product=alanine--tRNA ligase;protein_id=WP_000047170.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 41313 41813 . - . ID=gene-AC00_RS09910;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=AC00_RS09910;old_locus_tag=AC00_3107 NZ_JJLU01000095.1 Protein Homology CDS 41313 41813 . - 0 ID=cds-WP_000140506.1;Parent=gene-AC00_RS09910;Dbxref=GenBank:WP_000140506.1;Name=WP_000140506.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311582.1;locus_tag=AC00_RS09910;product=recombination regulator RecX;protein_id=WP_000140506.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 42068 43129 . - . ID=gene-AC00_RS09905;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AC00_RS09905;old_locus_tag=AC00_3108 NZ_JJLU01000095.1 Protein Homology CDS 42068 43129 . - 0 ID=cds-WP_032281483.1;Parent=gene-AC00_RS09905;Dbxref=GenBank:WP_032281483.1;Name=WP_032281483.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311583.1;locus_tag=AC00_RS09905;product=recombinase RecA;protein_id=WP_032281483.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 43209 43706 . - . ID=gene-AC00_RS09900;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=AC00_RS09900;old_locus_tag=AC00_3109 NZ_JJLU01000095.1 Protein Homology CDS 43209 43706 . - 0 ID=cds-WP_000132231.1;Parent=gene-AC00_RS09900;Dbxref=GenBank:WP_000132231.1;Name=WP_000132231.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=AC00_RS09900;product=nicotinamide-nucleotide amidase;protein_id=WP_000132231.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 43851 44936 . - . ID=gene-AC00_RS09895;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=AC00_RS09895;old_locus_tag=AC00_3110 NZ_JJLU01000095.1 Protein Homology CDS 43851 44936 . - 0 ID=cds-WP_001301333.1;Parent=gene-AC00_RS09895;Dbxref=GenBank:WP_001301333.1;Name=WP_001301333.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417181.1;locus_tag=AC00_RS09895;product=lytic murein transglycosylase B;protein_id=WP_001301333.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 45192 45755 . + . ID=gene-AC00_RS09890;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=AC00_RS09890;old_locus_tag=AC00_3111 NZ_JJLU01000095.1 Protein Homology CDS 45192 45755 . + 0 ID=cds-WP_000573321.1;Parent=gene-AC00_RS09890;Dbxref=GenBank:WP_000573321.1;Name=WP_000573321.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026180.1;locus_tag=AC00_RS09890;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_000573321.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 45752 46711 . + . ID=gene-AC00_RS09885;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=AC00_RS09885;old_locus_tag=AC00_3112 NZ_JJLU01000095.1 Protein Homology CDS 45752 46711 . + 0 ID=cds-WP_000148867.1;Parent=gene-AC00_RS09885;Dbxref=GenBank:WP_000148867.1;Name=WP_000148867.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708510.1;locus_tag=AC00_RS09885;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_000148867.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 46722 47093 . + . ID=gene-AC00_RS09880;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=AC00_RS09880;old_locus_tag=AC00_3113 NZ_JJLU01000095.1 Protein Homology CDS 46722 47093 . + 0 ID=cds-WP_000216200.1;Parent=gene-AC00_RS09880;Dbxref=GenBank:WP_000216200.1;Name=WP_000216200.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708511.1;locus_tag=AC00_RS09880;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_000216200.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 47097 47876 . + . ID=gene-AC00_RS09875;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=AC00_RS09875;old_locus_tag=AC00_3114 NZ_JJLU01000095.1 Protein Homology CDS 47097 47876 . + 0 ID=cds-WP_001077358.1;Parent=gene-AC00_RS09875;Dbxref=GenBank:WP_001077358.1;Name=WP_001077358.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417185.1;locus_tag=AC00_RS09875;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_001077358.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 47982 48341 . + . ID=gene-AC00_RS09870;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=AC00_RS09870;old_locus_tag=AC00_3115 NZ_JJLU01000095.1 Protein Homology CDS 47982 48341 . + 0 ID=cds-WP_000252905.1;Parent=gene-AC00_RS09870;Dbxref=GenBank:WP_000252905.1;Name=WP_000252905.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311589.1;locus_tag=AC00_RS09870;product=transcriptional regulator GutM;protein_id=WP_000252905.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 48408 49181 . + . ID=gene-AC00_RS09865;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=AC00_RS09865;old_locus_tag=AC00_3116 NZ_JJLU01000095.1 Protein Homology CDS 48408 49181 . + 0 ID=cds-WP_032281484.1;Parent=gene-AC00_RS09865;Dbxref=GenBank:WP_032281484.1;Name=WP_032281484.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311590.1;locus_tag=AC00_RS09865;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_032281484.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 49174 50139 . + . ID=gene-AC00_RS09860;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=AC00_RS09860;old_locus_tag=AC00_3117 NZ_JJLU01000095.1 Protein Homology CDS 49174 50139 . + 0 ID=cds-WP_032281485.1;Parent=gene-AC00_RS09860;Dbxref=GenBank:WP_032281485.1;Name=WP_032281485.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=AC00_RS09860;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_032281485.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 50136 51650 . - . ID=gene-AC00_RS09855;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=AC00_RS09855;old_locus_tag=AC00_3118 NZ_JJLU01000095.1 Protein Homology CDS 50136 51650 . - 0 ID=cds-WP_032281486.1;Parent=gene-AC00_RS09855;Dbxref=GenBank:WP_032281486.1;Name=WP_032281486.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311592.2;locus_tag=AC00_RS09855;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_032281486.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 51837 53276 . + . ID=gene-AC00_RS09850;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=AC00_RS09850;old_locus_tag=AC00_3119 NZ_JJLU01000095.1 Protein Homology CDS 51837 53276 . + 0 ID=cds-WP_032281487.1;Parent=gene-AC00_RS09850;Dbxref=GenBank:WP_032281487.1;Name=WP_032281487.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708517.1;locus_tag=AC00_RS09850;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_032281487.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 53273 54406 . + . ID=gene-AC00_RS09845;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=AC00_RS09845;old_locus_tag=AC00_3120 NZ_JJLU01000095.1 Protein Homology CDS 53273 54406 . + 0 ID=cds-WP_032281488.1;Parent=gene-AC00_RS09845;Dbxref=GenBank:WP_032281488.1;Name=WP_032281488.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417191.1;locus_tag=AC00_RS09845;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_032281488.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 54534 56786 . - . ID=gene-AC00_RS09840;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=AC00_RS09840;old_locus_tag=AC00_3121 NZ_JJLU01000095.1 Protein Homology CDS 54534 56786 . - 0 ID=cds-WP_032281505.1;Parent=gene-AC00_RS09840;Dbxref=GenBank:WP_032281505.1;Name=WP_032281505.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311595.1;locus_tag=AC00_RS09840;product=carbamoyltransferase HypF;protein_id=WP_032281505.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 56939 57466 . - . ID=gene-AC00_RS09835;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=AC00_RS09835;old_locus_tag=AC00_3122 NZ_JJLU01000095.1 Protein Homology CDS 56939 57466 . - 0 ID=cds-WP_001078777.1;Parent=gene-AC00_RS09835;Dbxref=GenBank:WP_001078777.1;Name=WP_001078777.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311596.1;locus_tag=AC00_RS09835;product=electron transport protein HydN;protein_id=WP_001078777.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 57616 58626 . - . ID=gene-AC00_RS09830;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=AC00_RS09830;old_locus_tag=AC00_3123 NZ_JJLU01000095.1 Protein Homology CDS 57616 58626 . - 0 ID=cds-WP_024262311.1;Parent=gene-AC00_RS09830;Dbxref=GenBank:WP_024262311.1;Name=WP_024262311.1;gbkey=CDS;gene=ascG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417194.2;locus_tag=AC00_RS09830;product=DNA-binding transcriptional regulator AscG;protein_id=WP_024262311.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 58886 60343 . + . ID=gene-AC00_RS09825;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=AC00_RS09825;old_locus_tag=AC00_3124 NZ_JJLU01000095.1 Protein Homology CDS 58886 60343 . + 0 ID=cds-WP_032281489.1;Parent=gene-AC00_RS09825;Dbxref=GenBank:WP_032281489.1;Name=WP_032281489.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026182.1;locus_tag=AC00_RS09825;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_032281489.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 60352 61776 . + . ID=gene-AC00_RS09820;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=AC00_RS09820;old_locus_tag=AC00_3125 NZ_JJLU01000095.1 Protein Homology CDS 60352 61776 . + 0 ID=cds-WP_032281506.1;Parent=gene-AC00_RS09820;Dbxref=GenBank:WP_032281506.1;Name=WP_032281506.1;gbkey=CDS;gene=ascB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417196.1;locus_tag=AC00_RS09820;product=6-phospho-beta-glucosidase AscB;protein_id=WP_032281506.1;transl_table=11 NZ_JJLU01000095.1 RefSeq pseudogene 61891 62309 . - . ID=gene-AC00_RS0125265;Name=AC00_RS0125265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125265;old_locus_tag=AC00_3126;pseudo=true NZ_JJLU01000095.1 Protein Homology CDS 61891 62309 . - 0 ID=cds-AC00_RS0125265;Parent=gene-AC00_RS0125265;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001696729.1;locus_tag=AC00_RS0125265;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 62335 62520 . - . ID=gene-AC00_RS30460;Name=AC00_RS30460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30460;old_locus_tag=AC00_3128 NZ_JJLU01000095.1 GeneMarkS-2+ CDS 62335 62520 . - 0 ID=cds-WP_148725565.1;Parent=gene-AC00_RS30460;Dbxref=GenBank:WP_148725565.1;Name=WP_148725565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS30460;product=hypothetical protein;protein_id=WP_148725565.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 62545 63012 . - . ID=gene-AC00_RS09815;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AC00_RS09815;old_locus_tag=AC00_3129 NZ_JJLU01000095.1 Protein Homology CDS 62545 63012 . - 0 ID=cds-WP_032288276.1;Parent=gene-AC00_RS09815;Dbxref=GenBank:WP_032288276.1;Name=WP_032288276.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132953.1;locus_tag=AC00_RS09815;product=hydrogenase maturation peptidase HycI;protein_id=WP_032288276.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 63005 63415 . - . ID=gene-AC00_RS09810;Name=hycH;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=AC00_RS09810;old_locus_tag=AC00_3130 NZ_JJLU01000095.1 Protein Homology CDS 63005 63415 . - 0 ID=cds-WP_001291913.1;Parent=gene-AC00_RS09810;Dbxref=GenBank:WP_001291913.1;Name=WP_001291913.1;gbkey=CDS;gene=hycH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311601.1;locus_tag=AC00_RS09810;product=formate hydrogenlyase assembly protein HycH;protein_id=WP_001291913.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 63412 64179 . - . ID=gene-AC00_RS09805;Name=hycG;gbkey=Gene;gene=hycG;gene_biotype=protein_coding;locus_tag=AC00_RS09805;old_locus_tag=AC00_3131 NZ_JJLU01000095.1 Protein Homology CDS 63412 64179 . - 0 ID=cds-WP_000067399.1;Parent=gene-AC00_RS09805;Dbxref=GenBank:WP_000067399.1;Name=WP_000067399.1;gbkey=CDS;gene=hycG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311602.1;locus_tag=AC00_RS09805;product=formate hydrogenlyase subunit HycG;protein_id=WP_000067399.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 64179 64721 . - . ID=gene-AC00_RS09800;Name=hycF;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=AC00_RS09800;old_locus_tag=AC00_3132 NZ_JJLU01000095.1 Protein Homology CDS 64179 64721 . - 0 ID=cds-WP_000493785.1;Parent=gene-AC00_RS09800;Dbxref=GenBank:WP_000493785.1;Name=WP_000493785.1;gbkey=CDS;gene=hycF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311603.1;locus_tag=AC00_RS09800;product=formate hydrogenlyase subunit HycF;protein_id=WP_000493785.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 64731 66440 . - . ID=gene-AC00_RS09795;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AC00_RS09795;old_locus_tag=AC00_3133 NZ_JJLU01000095.1 Protein Homology CDS 64731 66440 . - 0 ID=cds-WP_001288134.1;Parent=gene-AC00_RS09795;Dbxref=GenBank:WP_001288134.1;Name=WP_001288134.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=AC00_RS09795;product=formate hydrogenlyase subunit HycE;protein_id=WP_001288134.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 66458 67381 . - . ID=gene-AC00_RS09790;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AC00_RS09790;old_locus_tag=AC00_3134 NZ_JJLU01000095.1 Protein Homology CDS 66458 67381 . - 0 ID=cds-WP_000115226.1;Parent=gene-AC00_RS09790;Dbxref=GenBank:WP_000115226.1;Name=WP_000115226.1;gbkey=CDS;gene=hycD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311605.1;locus_tag=AC00_RS09790;product=formate hydrogenlyase subunit HycD;protein_id=WP_000115226.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 67384 69210 . - . ID=gene-AC00_RS09785;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=AC00_RS09785;old_locus_tag=AC00_3135 NZ_JJLU01000095.1 Protein Homology CDS 67384 69210 . - 0 ID=cds-WP_032281490.1;Parent=gene-AC00_RS09785;Dbxref=GenBank:WP_032281490.1;Name=WP_032281490.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311606.1;locus_tag=AC00_RS09785;product=formate hydrogenlyase subunit 3;protein_id=WP_032281490.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 69207 69818 . - . ID=gene-AC00_RS09780;Name=hycB;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=AC00_RS09780;old_locus_tag=AC00_3136 NZ_JJLU01000095.1 Protein Homology CDS 69207 69818 . - 0 ID=cds-WP_001079186.1;Parent=gene-AC00_RS09780;Dbxref=GenBank:WP_001079186.1;Name=WP_001079186.1;gbkey=CDS;gene=hycB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417204.1;locus_tag=AC00_RS09780;product=formate hydrogenlyase subunit HycB;protein_id=WP_001079186.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 69943 70404 . - . ID=gene-AC00_RS09775;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=AC00_RS09775;old_locus_tag=AC00_3137 NZ_JJLU01000095.1 Protein Homology CDS 69943 70404 . - 0 ID=cds-WP_000158056.1;Parent=gene-AC00_RS09775;Dbxref=GenBank:WP_000158056.1;Name=WP_000158056.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311608.1;locus_tag=AC00_RS09775;product=formate hydrogenlyase regulator HycA;protein_id=WP_000158056.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 70616 70966 . + . ID=gene-AC00_RS09770;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AC00_RS09770;old_locus_tag=AC00_3139 NZ_JJLU01000095.1 Protein Homology CDS 70616 70966 . + 0 ID=cds-WP_001299100.1;Parent=gene-AC00_RS09770;Dbxref=GenBank:WP_001299100.1;Name=WP_001299100.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=AC00_RS09770;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_001299100.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 70970 71842 . + . ID=gene-AC00_RS09765;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=AC00_RS09765;old_locus_tag=AC00_3140 NZ_JJLU01000095.1 Protein Homology CDS 70970 71842 . + 0 ID=cds-WP_032281491.1;Parent=gene-AC00_RS09765;Dbxref=GenBank:WP_032281491.1;Name=WP_032281491.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417207.1;locus_tag=AC00_RS09765;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_032281491.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 71833 72105 . + . ID=gene-AC00_RS09760;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=AC00_RS09760;old_locus_tag=AC00_3141 NZ_JJLU01000095.1 Protein Homology CDS 71833 72105 . + 0 ID=cds-WP_000334881.1;Parent=gene-AC00_RS09760;Dbxref=GenBank:WP_000334881.1;Name=WP_000334881.1;gbkey=CDS;gene=hypC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311611.1;locus_tag=AC00_RS09760;product=hydrogenase 3 maturation protein HypC;protein_id=WP_000334881.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 72105 73226 . + . ID=gene-AC00_RS09755;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=AC00_RS09755;old_locus_tag=AC00_3142 NZ_JJLU01000095.1 Protein Homology CDS 72105 73226 . + 0 ID=cds-WP_032281492.1;Parent=gene-AC00_RS09755;Dbxref=GenBank:WP_032281492.1;Name=WP_032281492.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708530.1;locus_tag=AC00_RS09755;product=hydrogenase formation protein HypD;protein_id=WP_032281492.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 73223 74233 . + . ID=gene-AC00_RS09750;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=AC00_RS09750;old_locus_tag=AC00_3143 NZ_JJLU01000095.1 Protein Homology CDS 73223 74233 . + 0 ID=cds-WP_032281493.1;Parent=gene-AC00_RS09750;Dbxref=GenBank:WP_032281493.1;Name=WP_032281493.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311613.2;locus_tag=AC00_RS09750;product=hydrogenase maturation carbamoyl dehydratase HypE;protein_id=WP_032281493.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 74307 76385 . + . ID=gene-AC00_RS09745;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=AC00_RS09745;old_locus_tag=AC00_3144 NZ_JJLU01000095.1 Protein Homology CDS 74307 76385 . + 0 ID=cds-WP_032288277.1;Parent=gene-AC00_RS09745;Dbxref=GenBank:WP_032288277.1;Name=WP_032288277.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311614.1;locus_tag=AC00_RS09745;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_032288277.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 76430 76858 . + . ID=gene-AC00_RS09740;Name=AC00_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09740;old_locus_tag=AC00_3145 NZ_JJLU01000095.1 Protein Homology CDS 76430 76858 . + 0 ID=cds-WP_000301062.1;Parent=gene-AC00_RS09740;Dbxref=GenBank:WP_000301062.1;Name=WP_000301062.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134844.1;locus_tag=AC00_RS09740;product=TOBE domain-containing protein;protein_id=WP_000301062.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 76897 77241 . - . ID=gene-AC00_RS09735;Name=ygbA;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=AC00_RS09735;old_locus_tag=AC00_3146 NZ_JJLU01000095.1 Protein Homology CDS 76897 77241 . - 0 ID=cds-WP_000015494.1;Parent=gene-AC00_RS09735;Dbxref=GenBank:WP_000015494.1;Name=WP_000015494.1;gbkey=CDS;gene=ygbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683228.1;locus_tag=AC00_RS09735;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_000015494.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 77318 77452 . - . ID=gene-AC00_RS30940;Name=AC00_RS30940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30940;old_locus_tag=AC00_3147 NZ_JJLU01000095.1 Protein Homology CDS 77318 77452 . - 0 ID=cds-WP_000611932.1;Parent=gene-AC00_RS30940;Dbxref=GenBank:WP_000611932.1;Name=WP_000611932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439274.1;locus_tag=AC00_RS30940;product=hypothetical protein;protein_id=WP_000611932.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 77528 80089 . + . ID=gene-AC00_RS09730;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=AC00_RS09730;old_locus_tag=AC00_3148 NZ_JJLU01000095.1 Protein Homology CDS 77528 80089 . + 0 ID=cds-WP_028132375.1;Parent=gene-AC00_RS09730;Dbxref=GenBank:WP_028132375.1;Name=WP_028132375.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311616.1;locus_tag=AC00_RS09730;product=DNA mismatch repair protein MutS;protein_id=WP_028132375.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 80195 80851 . + . ID=gene-AC00_RS09725;Name=pphB;gbkey=Gene;gene=pphB;gene_biotype=protein_coding;locus_tag=AC00_RS09725;old_locus_tag=AC00_3149 NZ_JJLU01000095.1 Protein Homology CDS 80195 80851 . + 0 ID=cds-WP_032281495.1;Parent=gene-AC00_RS09725;Dbxref=GenBank:WP_032281495.1;Name=WP_032281495.1;gbkey=CDS;gene=pphB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311617.1;locus_tag=AC00_RS09725;product=protein-serine/threonine phosphatase;protein_id=WP_032281495.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 80902 81669 . - . ID=gene-AC00_RS09720;Name=ygbI;gbkey=Gene;gene=ygbI;gene_biotype=protein_coding;locus_tag=AC00_RS09720;old_locus_tag=AC00_3150 NZ_JJLU01000095.1 Protein Homology CDS 80902 81669 . - 0 ID=cds-WP_032281496.1;Parent=gene-AC00_RS09720;Dbxref=GenBank:WP_032281496.1;Name=WP_032281496.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ygbI;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417215.2;locus_tag=AC00_RS09720;product=DNA-binding transcriptional repressor YgbI;protein_id=WP_032281496.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 81865 82773 . + . ID=gene-AC00_RS09715;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=AC00_RS09715;old_locus_tag=AC00_3151 NZ_JJLU01000095.1 Protein Homology CDS 81865 82773 . + 0 ID=cds-WP_000847985.1;Parent=gene-AC00_RS09715;Dbxref=GenBank:WP_000847985.1;Name=WP_000847985.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417216.1;locus_tag=AC00_RS09715;product=L-threonate dehydrogenase;protein_id=WP_000847985.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 82770 84032 . + . ID=gene-AC00_RS09710;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=AC00_RS09710;old_locus_tag=AC00_3152 NZ_JJLU01000095.1 Protein Homology CDS 82770 84032 . + 0 ID=cds-WP_001613685.1;Parent=gene-AC00_RS09710;Dbxref=GenBank:WP_001613685.1;Name=WP_001613685.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001649192.1;locus_tag=AC00_RS09710;product=3-oxo-tetronate kinase;protein_id=WP_001613685.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 84029 84667 . + . ID=gene-AC00_RS09705;Name=ygbL;gbkey=Gene;gene=ygbL;gene_biotype=protein_coding;locus_tag=AC00_RS09705;old_locus_tag=AC00_3153 NZ_JJLU01000095.1 Protein Homology CDS 84029 84667 . + 0 ID=cds-WP_032281497.1;Parent=gene-AC00_RS09705;Dbxref=GenBank:WP_032281497.1;Name=WP_032281497.1;gbkey=CDS;gene=ygbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417218.1;locus_tag=AC00_RS09705;product=aldolase;protein_id=WP_032281497.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 84672 85448 . + . ID=gene-AC00_RS09700;Name=ygbM;gbkey=Gene;gene=ygbM;gene_biotype=protein_coding;locus_tag=AC00_RS09700;old_locus_tag=AC00_3154 NZ_JJLU01000095.1 Protein Homology CDS 84672 85448 . + 0 ID=cds-WP_032281498.1;Parent=gene-AC00_RS09700;Dbxref=GenBank:WP_032281498.1;Name=WP_032281498.1;gbkey=CDS;gene=ygbM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417219.1;locus_tag=AC00_RS09700;product=HPr family phosphocarrier protein;protein_id=WP_032281498.1;transl_table=11 NZ_JJLU01000095.1 RefSeq pseudogene 85537 86901 . + . ID=gene-AC00_RS09695;Name=ygbN;gbkey=Gene;gene=ygbN;gene_biotype=pseudogene;locus_tag=AC00_RS09695;old_locus_tag=AC00_3155;pseudo=true NZ_JJLU01000095.1 Protein Homology CDS 85537 86901 . + 0 ID=cds-AC00_RS09695;Parent=gene-AC00_RS09695;Note=internal stop;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=ygbN;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417220.1;locus_tag=AC00_RS09695;product=GntP family transporter;pseudo=true;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 86940 87176 . - . ID=gene-AC00_RS09690;Name=AC00_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09690;old_locus_tag=AC00_3156 NZ_JJLU01000095.1 Protein Homology CDS 86940 87176 . - 0 ID=cds-WP_000562980.1;Parent=gene-AC00_RS09690;Dbxref=GenBank:WP_000562980.1;Name=WP_000562980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311618.1;locus_tag=AC00_RS09690;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_000562980.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 87187 88614 . - . ID=gene-AC00_RS09685;Name=AC00_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09685;old_locus_tag=AC00_3157 NZ_JJLU01000095.1 Protein Homology CDS 87187 88614 . - 0 ID=cds-WP_032281499.1;Parent=gene-AC00_RS09685;Dbxref=GenBank:WP_032281499.1;Name=WP_032281499.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311619.1;locus_tag=AC00_RS09685;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_032281499.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 88614 89207 . - . ID=gene-AC00_RS09680;Name=AC00_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09680;old_locus_tag=AC00_3158 NZ_JJLU01000095.1 Protein Homology CDS 88614 89207 . - 0 ID=cds-WP_032281500.1;Parent=gene-AC00_RS09680;Dbxref=GenBank:WP_032281500.1;Name=WP_032281500.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311620.1;locus_tag=AC00_RS09680;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_032281500.1;transl_table=11 NZ_JJLU01000095.1 RefSeq gene 89354 89761 . + . ID=gene-AC00_RS09675;Name=AC00_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09675;old_locus_tag=AC00_3159 NZ_JJLU01000095.1 Protein Homology CDS 89354 89761 . + 0 ID=cds-WP_032281501.1;Parent=gene-AC00_RS09675;Dbxref=GenBank:WP_032281501.1;Name=WP_032281501.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311621.1;locus_tag=AC00_RS09675;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_032281501.1;transl_table=11 NZ_JJLU01000095.1 RefSeq pseudogene 89882 90403 . - . ID=gene-AC00_RS09670;Name=AC00_RS09670;end_range=90403,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS09670;old_locus_tag=AC00_3160;partial=true;pseudo=true NZ_JJLU01000095.1 Protein Homology CDS 89882 90403 . - 0 ID=cds-AC00_RS09670;Parent=gene-AC00_RS09670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006352,GO:0006355,GO:0003700;end_range=90403,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AC00_RS09670;partial=true;product=sigma-70 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000095.1 RefSeq pseudogene 90551 90751 . - . ID=gene-AC00_RS28040;Name=AC00_RS28040;end_range=90751,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28040;partial=true;pseudo=true NZ_JJLU01000095.1 Protein Homology CDS 90551 90751 . - 0 ID=cds-AC00_RS28040;Parent=gene-AC00_RS28040;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=90751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AC00_RS28040;partial=true;product=class A beta-lactamase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000096.1 1 16729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000096.1 RefSeq region 1 16729 . + . ID=NZ_JJLU01000096.1:1..16729;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000096.1 RefSeq gene 148 1008 . - . ID=gene-AC00_RS09665;Name=AC00_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09665;old_locus_tag=AC00_3161 NZ_JJLU01000096.1 Protein Homology CDS 148 1008 . - 0 ID=cds-WP_000027057.1-2;Parent=gene-AC00_RS09665;Dbxref=GenBank:WP_000027057.1;Name=WP_000027057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AC00_RS09665;product=broad-spectrum class A beta-lactamase TEM-1;protein_id=WP_000027057.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 1191 1748 . - . ID=gene-AC00_RS09660;Name=AC00_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09660;old_locus_tag=AC00_3162 NZ_JJLU01000096.1 Protein Homology CDS 1191 1748 . - 0 ID=cds-WP_001235713.1-2;Parent=gene-AC00_RS09660;Dbxref=GenBank:WP_001235713.1;Name=WP_001235713.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687610.1;locus_tag=AC00_RS09660;product=recombinase family protein;protein_id=WP_001235713.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 1912 4917 . + . ID=gene-AC00_RS09655;Name=AC00_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09655;old_locus_tag=AC00_3163 NZ_JJLU01000096.1 Protein Homology CDS 1912 4917 . + 0 ID=cds-WP_001143760.1-2;Parent=gene-AC00_RS09655;Dbxref=GenBank:WP_001143760.1;Name=WP_001143760.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=AC00_RS09655;product=Tn3-like element Tn3 family transposase;protein_id=WP_001143760.1;transl_table=11 NZ_JJLU01000096.1 RefSeq pseudogene 4950 5426 . - . ID=gene-AC00_RS09650;Name=AC00_RS09650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS09650;old_locus_tag=AC00_3164;partial=true;pseudo=true;start_range=.,4950 NZ_JJLU01000096.1 Protein Homology CDS 4950 5426 . - 0 ID=cds-AC00_RS09650;Parent=gene-AC00_RS09650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=AC00_RS09650;partial=true;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;start_range=.,4950;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 5489 6583 . - . ID=gene-AC00_RS09645;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=AC00_RS09645;old_locus_tag=AC00_3165 NZ_JJLU01000096.1 Protein Homology CDS 5489 6583 . - 0 ID=cds-WP_309460894.1;Parent=gene-AC00_RS09645;Dbxref=GenBank:WP_309460894.1;Name=WP_309460894.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417222.1;locus_tag=AC00_RS09645;product=murein hydrolase activator NlpD;protein_id=WP_309460894.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 6768 7394 . - . ID=gene-AC00_RS09640;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=AC00_RS09640;old_locus_tag=AC00_3166 NZ_JJLU01000096.1 Protein Homology CDS 6768 7394 . - 0 ID=cds-WP_000254708.1;Parent=gene-AC00_RS09640;Dbxref=GenBank:WP_000254708.1;Name=WP_000254708.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;gene=pcm;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=AC00_RS09640;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_000254708.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 7388 8149 . - . ID=gene-AC00_RS09635;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=AC00_RS09635;old_locus_tag=AC00_3167 NZ_JJLU01000096.1 Protein Homology CDS 7388 8149 . - 0 ID=cds-WP_001295182.1;Parent=gene-AC00_RS09635;Dbxref=GenBank:WP_001295182.1;Name=WP_001295182.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311625.1;locus_tag=AC00_RS09635;product=5'/3'-nucleotidase SurE;protein_id=WP_001295182.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 8130 9179 . - . ID=gene-AC00_RS09630;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=AC00_RS09630;old_locus_tag=AC00_3168 NZ_JJLU01000096.1 Protein Homology CDS 8130 9179 . - 0 ID=cds-WP_032281504.1;Parent=gene-AC00_RS09630;Dbxref=GenBank:WP_032281504.1;Name=WP_032281504.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311626.1;locus_tag=AC00_RS09630;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_032281504.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 9176 9655 . - . ID=gene-AC00_RS09625;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AC00_RS09625;old_locus_tag=AC00_3169 NZ_JJLU01000096.1 Protein Homology CDS 9176 9655 . - 0 ID=cds-WP_001219242.1;Parent=gene-AC00_RS09625;Dbxref=GenBank:WP_001219242.1;Name=WP_001219242.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=AC00_RS09625;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_001219242.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 9655 10365 . - . ID=gene-AC00_RS09620;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AC00_RS09620;old_locus_tag=AC00_3170 NZ_JJLU01000096.1 Protein Homology CDS 9655 10365 . - 0 ID=cds-WP_000246138.1;Parent=gene-AC00_RS09620;Dbxref=GenBank:WP_000246138.1;Name=WP_000246138.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417227.1;locus_tag=AC00_RS09620;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000246138.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 10384 10695 . - . ID=gene-AC00_RS09615;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=AC00_RS09615;old_locus_tag=AC00_3171 NZ_JJLU01000096.1 Protein Homology CDS 10384 10695 . - 0 ID=cds-WP_000517476.1;Parent=gene-AC00_RS09615;Dbxref=GenBank:WP_000517476.1;Name=WP_000517476.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311629.1;locus_tag=AC00_RS09615;product=cell division protein FtsB;protein_id=WP_000517476.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 10889 11212 . - . ID=gene-AC00_RS09610;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=AC00_RS09610;old_locus_tag=AC00_3173 NZ_JJLU01000096.1 Protein Homology CDS 10889 11212 . - 0 ID=cds-WP_001246103.1;Parent=gene-AC00_RS09610;Dbxref=GenBank:WP_001246103.1;Name=WP_001246103.1;gbkey=CDS;gene=ygbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311630.1;locus_tag=AC00_RS09610;product=DUF3561 family protein;protein_id=WP_001246103.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 11262 11867 . - . ID=gene-AC00_RS09605;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=AC00_RS09605;old_locus_tag=AC00_3174 NZ_JJLU01000096.1 Protein Homology CDS 11262 11867 . - 0 ID=cds-WP_001173673.1;Parent=gene-AC00_RS09605;Dbxref=GenBank:WP_001173673.1;Name=WP_001173673.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=AC00_RS09605;product=adenylyl-sulfate kinase;protein_id=WP_001173673.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 11867 13294 . - . ID=gene-AC00_RS09600;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=AC00_RS09600;old_locus_tag=AC00_3175 NZ_JJLU01000096.1 Protein Homology CDS 11867 13294 . - 0 ID=cds-WP_001090361.1;Parent=gene-AC00_RS09600;Dbxref=GenBank:WP_001090361.1;Name=WP_001090361.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417231.1;locus_tag=AC00_RS09600;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_001090361.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 13296 14204 . - . ID=gene-AC00_RS09595;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=AC00_RS09595;old_locus_tag=AC00_3176 NZ_JJLU01000096.1 Protein Homology CDS 13296 14204 . - 0 ID=cds-WP_000372392.1;Parent=gene-AC00_RS09595;Dbxref=GenBank:WP_000372392.1;Name=WP_000372392.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=AC00_RS09595;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_000372392.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 14456 15493 . + . ID=gene-AC00_RS09590;Name=iap;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=AC00_RS09590;old_locus_tag=AC00_3177 NZ_JJLU01000096.1 Protein Homology CDS 14456 15493 . + 0 ID=cds-WP_000490426.1;Parent=gene-AC00_RS09590;Dbxref=GenBank:WP_000490426.1;Name=WP_000490426.1;gbkey=CDS;gene=iap;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311634.1;locus_tag=AC00_RS09590;product=alkaline phosphatase isozyme conversion aminopeptidase;protein_id=WP_000490426.1;transl_table=11 NZ_JJLU01000096.1 RefSeq gene 15779 16729 . - . ID=gene-AC00_RS09585;Name=AC00_RS09585;end_range=16729,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09585;old_locus_tag=AC00_3178;partial=true NZ_JJLU01000096.1 Protein Homology CDS 15779 16729 . - 0 ID=cds-WP_012738266.1-5;Parent=gene-AC00_RS09585;Dbxref=GenBank:WP_012738266.1;Name=WP_012738266.1;Ontology_term=GO:0006313,GO:0004803;end_range=16729,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS09585;partial=true;product=IS4 family transposase;protein_id=WP_012738266.1;transl_table=11 ##sequence-region NZ_JJLU01000097.1 1 13815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000097.1 RefSeq region 1 13815 . + . ID=NZ_JJLU01000097.1:1..13815;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000097.1 RefSeq gene 1 97 . - . ID=gene-AC00_RS31300;Name=AC00_RS31300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31300;old_locus_tag=AC00_3179;partial=true;start_range=.,1 NZ_JJLU01000097.1 Protein Homology CDS 1 97 . - 0 ID=cds-WP_001425824.1-2;Parent=gene-AC00_RS31300;Dbxref=GenBank:WP_001425824.1;Name=WP_001425824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS31300;partial=true;product=hypothetical protein;protein_id=WP_001425824.1;start_range=.,1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 174 326 . - . ID=gene-AC00_RS0125275;Name=AC00_RS0125275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125275 NZ_JJLU01000097.1 Protein Homology CDS 174 326 . - 0 ID=cds-WP_000956458.1;Parent=gene-AC00_RS0125275;Dbxref=GenBank:WP_000956458.1;Name=WP_000956458.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311643.1;locus_tag=AC00_RS0125275;product=Hok/Gef family protein;protein_id=WP_000956458.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 590 1324 . - . ID=gene-AC00_RS09580;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=AC00_RS09580;old_locus_tag=AC00_3180 NZ_JJLU01000097.1 Protein Homology CDS 590 1324 . - 0 ID=cds-WP_000039862.1;Parent=gene-AC00_RS09580;Dbxref=GenBank:WP_000039862.1;Name=WP_000039862.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311644.1;locus_tag=AC00_RS09580;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_000039862.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 1398 3110 . - . ID=gene-AC00_RS09575;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=AC00_RS09575;old_locus_tag=AC00_3181 NZ_JJLU01000097.1 Protein Homology CDS 1398 3110 . - 0 ID=cds-WP_001290715.1;Parent=gene-AC00_RS09575;Dbxref=GenBank:WP_001290715.1;Name=WP_001290715.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=AC00_RS09575;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_001290715.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 3110 4909 . - . ID=gene-AC00_RS09570;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=AC00_RS09570;old_locus_tag=AC00_3182 NZ_JJLU01000097.1 Protein Homology CDS 3110 4909 . - 0 ID=cds-WP_032281508.1;Parent=gene-AC00_RS09570;Dbxref=GenBank:WP_032281508.1;Name=WP_032281508.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311646.1;locus_tag=AC00_RS09570;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_032281508.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 5227 5589 . + . ID=gene-AC00_RS09565;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=AC00_RS09565;old_locus_tag=AC00_3183 NZ_JJLU01000097.1 Protein Homology CDS 5227 5589 . + 0 ID=cds-WP_000108294.1;Parent=gene-AC00_RS09565;Dbxref=GenBank:WP_000108294.1;Name=WP_000108294.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708563.2;locus_tag=AC00_RS09565;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_000108294.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 5667 6938 . + . ID=gene-AC00_RS09560;Name=ygcN;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=AC00_RS09560;old_locus_tag=AC00_3184 NZ_JJLU01000097.1 Protein Homology CDS 5667 6938 . + 0 ID=cds-WP_032288280.1;Parent=gene-AC00_RS09560;Dbxref=GenBank:WP_032288280.1;Name=WP_032288280.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ygcN;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311648.2;locus_tag=AC00_RS09560;product=FAD-dependent oxidoreductase;protein_id=WP_032288280.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 6929 7189 . + . ID=gene-AC00_RS09555;Name=ygcO;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=AC00_RS09555;old_locus_tag=AC00_3185 NZ_JJLU01000097.1 Protein Homology CDS 6929 7189 . + 0 ID=cds-WP_001625782.1;Parent=gene-AC00_RS09555;Dbxref=GenBank:WP_001625782.1;Name=WP_001625782.1;gbkey=CDS;gene=ygcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417247.2;locus_tag=AC00_RS09555;product=ferredoxin family protein;protein_id=WP_001625782.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 7206 7781 . + . ID=gene-AC00_RS09550;Name=ygcP;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=AC00_RS09550;old_locus_tag=AC00_3186 NZ_JJLU01000097.1 Protein Homology CDS 7206 7781 . + 0 ID=cds-WP_032281510.1;Parent=gene-AC00_RS09550;Dbxref=GenBank:WP_032281510.1;Name=WP_032281510.1;gbkey=CDS;gene=ygcP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417248.1;locus_tag=AC00_RS09550;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_032281510.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 7929 8789 . - . ID=gene-AC00_RS09545;Name=ygcQ;gbkey=Gene;gene=ygcQ;gene_biotype=protein_coding;locus_tag=AC00_RS09545;old_locus_tag=AC00_3187 NZ_JJLU01000097.1 Protein Homology CDS 7929 8789 . - 0 ID=cds-WP_032281511.1;Parent=gene-AC00_RS09545;Dbxref=GenBank:WP_032281511.1;Name=WP_032281511.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;gene=ygcQ;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417249.4;locus_tag=AC00_RS09545;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_032281511.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 8786 9565 . - . ID=gene-AC00_RS09540;Name=ygcR;gbkey=Gene;gene=ygcR;gene_biotype=protein_coding;locus_tag=AC00_RS09540;old_locus_tag=AC00_3188 NZ_JJLU01000097.1 Protein Homology CDS 8786 9565 . - 0 ID=cds-WP_032281512.1;Parent=gene-AC00_RS09540;Dbxref=GenBank:WP_032281512.1;Name=WP_032281512.1;gbkey=CDS;gene=ygcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311653.2;locus_tag=AC00_RS09540;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_032281512.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 9543 10952 . - . ID=gene-AC00_RS09535;Name=ygcS;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=AC00_RS09535;old_locus_tag=AC00_3189 NZ_JJLU01000097.1 Protein Homology CDS 9543 10952 . - 0 ID=cds-WP_162721661.1;Parent=gene-AC00_RS09535;Dbxref=GenBank:WP_162721661.1;Name=WP_162721661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygcS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708568.1;locus_tag=AC00_RS09535;product=MFS transporter;protein_id=WP_162721661.1;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 10974 12428 . - . ID=gene-AC00_RS09530;Name=ygcU;gbkey=Gene;gene=ygcU;gene_biotype=protein_coding;locus_tag=AC00_RS09530;old_locus_tag=AC00_3190 NZ_JJLU01000097.1 Protein Homology CDS 10974 12428 . - 0 ID=cds-WP_032281514.1;Parent=gene-AC00_RS09530;Dbxref=GenBank:WP_032281514.1;Name=WP_032281514.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=ygcU;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311656.1;locus_tag=AC00_RS09530;product=FAD-binding oxidoreductase;protein_id=WP_032281514.1;transl_table=11 NZ_JJLU01000097.1 RefSeq pseudogene 12498 13136 . - . ID=gene-AC00_RS09525;Name=AC00_RS09525;end_range=13136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS09525;old_locus_tag=AC00_3191;partial=true;pseudo=true NZ_JJLU01000097.1 Protein Homology CDS 12498 13136 . - 0 ID=cds-AC00_RS09525;Parent=gene-AC00_RS09525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=13136,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417254.4;locus_tag=AC00_RS09525;partial=true;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_JJLU01000097.1 RefSeq gene 13154 13815 . - . ID=gene-AC00_RS0125280;Name=AC00_RS0125280;end_range=13815,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125280;old_locus_tag=AC00_3192;partial=true NZ_JJLU01000097.1 Protein Homology CDS 13602 13815 . - 0 ID=cds-WP_231248335.1-4;Parent=gene-AC00_RS0125280;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;end_range=13815,.;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0125280;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;transl_table=11 NZ_JJLU01000097.1 Protein Homology CDS 13154 13602 . - 2 ID=cds-WP_231248335.1-4;Parent=gene-AC00_RS0125280;Dbxref=GenBank:WP_231248335.1;Name=WP_231248335.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0125280;partial=true;product=IS1-like element IS1A family transposase;protein_id=WP_231248335.1;transl_table=11 ##sequence-region NZ_JJLU01000098.1 1 5258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000098.1 RefSeq region 1 5258 . + . ID=NZ_JJLU01000098.1:1..5258;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000098.1 RefSeq gene 1 229 . - . ID=gene-AC00_RS0125290;Name=AC00_RS0125290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125290;old_locus_tag=AC00_3193;partial=true;start_range=.,1 NZ_JJLU01000098.1 Protein Homology CDS 1 229 . - 0 ID=cds-WP_001396637.1-2;Parent=gene-AC00_RS0125290;Dbxref=GenBank:WP_001396637.1;Name=WP_001396637.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0125290;partial=true;product=IS1 family transposase;protein_id=WP_001396637.1;start_range=.,1;transl_table=11 NZ_JJLU01000098.1 RefSeq pseudogene 283 438 . - . ID=gene-AC00_RS30465;Name=AC00_RS30465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30465;old_locus_tag=AC00_3194;partial=true;pseudo=true;start_range=.,283 NZ_JJLU01000098.1 Protein Homology CDS 283 438 . - 0 ID=cds-AC00_RS30465;Parent=gene-AC00_RS30465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311657.2;locus_tag=AC00_RS30465;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;start_range=.,283;transl_table=11 NZ_JJLU01000098.1 RefSeq gene 758 2035 . + . ID=gene-AC00_RS09515;Name=yqcE;gbkey=Gene;gene=yqcE;gene_biotype=protein_coding;locus_tag=AC00_RS09515;old_locus_tag=AC00_3195 NZ_JJLU01000098.1 Protein Homology CDS 758 2035 . + 0 ID=cds-WP_021557146.1;Parent=gene-AC00_RS09515;Dbxref=GenBank:WP_021557146.1;Name=WP_021557146.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;gene=yqcE;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311658.1;locus_tag=AC00_RS09515;product=MFS transporter;protein_id=WP_021557146.1;transl_table=11 NZ_JJLU01000098.1 RefSeq gene 2062 3540 . + . ID=gene-AC00_RS09510;Name=ygcE;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=AC00_RS09510;old_locus_tag=AC00_3196 NZ_JJLU01000098.1 Protein Homology CDS 2062 3540 . + 0 ID=cds-WP_032281515.1;Parent=gene-AC00_RS09510;Dbxref=GenBank:WP_032281515.1;Name=WP_032281515.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;gene=ygcE;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417256.1;locus_tag=AC00_RS09510;product=FGGY-family carbohydrate kinase;protein_id=WP_032281515.1;transl_table=11 NZ_JJLU01000098.1 RefSeq gene 3953 4624 . - . ID=gene-AC00_RS09505;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=AC00_RS09505;old_locus_tag=AC00_3197 NZ_JJLU01000098.1 Protein Homology CDS 3953 4624 . - 0 ID=cds-WP_001199973.1;Parent=gene-AC00_RS09505;Dbxref=GenBank:WP_001199973.1;Name=WP_001199973.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=AC00_RS09505;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001199973.1;transl_table=11 NZ_JJLU01000098.1 RefSeq pseudogene 4797 4949 . + . ID=gene-AC00_RS28050;Name=AC00_RS28050;end_range=4949,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28050;old_locus_tag=AC00_3198;partial=true;pseudo=true NZ_JJLU01000098.1 Protein Homology CDS 4797 4949 . + 0 ID=cds-AC00_RS28050;Parent=gene-AC00_RS28050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000944219.1;locus_tag=AC00_RS28050;partial=true;product=LemA family protein;pseudo=true;transl_table=11 NZ_JJLU01000098.1 RefSeq gene 5006 5258 . + . ID=gene-AC00_RS28055;Name=AC00_RS28055;end_range=5258,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28055;old_locus_tag=AC00_3199;partial=true NZ_JJLU01000098.1 Protein Homology CDS 5006 5258 . + 0 ID=cds-WP_001483354.1-2;Parent=gene-AC00_RS28055;Dbxref=GenBank:WP_001483354.1;Name=WP_001483354.1;end_range=5258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28055;partial=true;product=IS1-like element transposase;protein_id=WP_001483354.1;transl_table=11 ##sequence-region NZ_JJLU01000099.1 1 79607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000099.1 RefSeq region 1 79607 . + . ID=NZ_JJLU01000099.1:1..79607;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000099.1 RefSeq gene 1 237 . + . ID=gene-AC00_RS09500;Name=AC00_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09500;old_locus_tag=AC00_3200;partial=true;start_range=.,1 NZ_JJLU01000099.1 Protein Homology CDS 1 237 . + 0 ID=cds-WP_000696951.1;Parent=gene-AC00_RS09500;Dbxref=GenBank:WP_000696951.1;Name=WP_000696951.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS09500;partial=true;product=IS1 family transposase;protein_id=WP_000696951.1;start_range=.,1;transl_table=11 NZ_JJLU01000099.1 RefSeq pseudogene 248 496 . + . ID=gene-AC00_RS0125300;Name=AC00_RS0125300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125300;old_locus_tag=AC00_3201;partial=true;pseudo=true;start_range=.,248 NZ_JJLU01000099.1 Protein Homology CDS 248 496 . + 0 ID=cds-AC00_RS0125300;Parent=gene-AC00_RS0125300;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001600411.1;locus_tag=AC00_RS0125300;partial=true;product=LemA family protein;pseudo=true;start_range=.,248;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 510 1403 . + . ID=gene-AC00_RS09495;Name=AC00_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09495;old_locus_tag=AC00_3202 NZ_JJLU01000099.1 Protein Homology CDS 510 1403 . + 0 ID=cds-WP_032281535.1;Parent=gene-AC00_RS09495;Dbxref=GenBank:WP_032281535.1;Name=WP_032281535.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311662.1;locus_tag=AC00_RS09495;product=TPM domain-containing protein;protein_id=WP_032281535.1;transl_table=11 NZ_JJLU01000099.1 RefSeq pseudogene 1418 2566 . + . ID=gene-AC00_RS0125305;Name=AC00_RS0125305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125305;pseudo=true NZ_JJLU01000099.1 Protein Homology CDS 1418 2566 . + 0 ID=cds-AC00_RS0125305;Parent=gene-AC00_RS0125305;Note=internal stop;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311664.1;locus_tag=AC00_RS0125305;product=TPM domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 2563 3465 . + . ID=gene-AC00_RS09490;Name=AC00_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09490;old_locus_tag=AC00_3205 NZ_JJLU01000099.1 Protein Homology CDS 2563 3465 . + 0 ID=cds-WP_136747877.1;Parent=gene-AC00_RS09490;Dbxref=GenBank:WP_136747877.1;Name=WP_136747877.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311665.3;locus_tag=AC00_RS09490;product=TPM domain-containing protein;protein_id=WP_136747877.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 3525 4823 . - . ID=gene-AC00_RS09485;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AC00_RS09485;old_locus_tag=AC00_3206 NZ_JJLU01000099.1 Protein Homology CDS 3525 4823 . - 0 ID=cds-WP_000036723.1;Parent=gene-AC00_RS09485;Dbxref=GenBank:WP_000036723.1;Name=WP_000036723.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311666.1;locus_tag=AC00_RS09485;product=phosphopyruvate hydratase;protein_id=WP_000036723.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 4911 6548 . - . ID=gene-AC00_RS09480;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AC00_RS09480;old_locus_tag=AC00_3207 NZ_JJLU01000099.1 Protein Homology CDS 4911 6548 . - 0 ID=cds-WP_000210878.1;Parent=gene-AC00_RS09480;Dbxref=GenBank:WP_000210878.1;Name=WP_000210878.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=AC00_RS09480;product=glutamine hydrolyzing CTP synthase;protein_id=WP_000210878.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 6776 7567 . - . ID=gene-AC00_RS09475;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=AC00_RS09475;old_locus_tag=AC00_3208 NZ_JJLU01000099.1 Protein Homology CDS 6776 7567 . - 0 ID=cds-WP_032281519.1;Parent=gene-AC00_RS09475;Dbxref=GenBank:WP_032281519.1;Name=WP_032281519.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311668.1;locus_tag=AC00_RS09475;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_032281519.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 7638 7973 . - . ID=gene-AC00_RS09470;Name=mazF;gbkey=Gene;gene=mazF;gene_biotype=protein_coding;locus_tag=AC00_RS09470;old_locus_tag=AC00_3209 NZ_JJLU01000099.1 Protein Homology CDS 7638 7973 . - 0 ID=cds-WP_000254738.1;Parent=gene-AC00_RS09470;Dbxref=GenBank:WP_000254738.1;Name=WP_000254738.1;gbkey=CDS;gene=mazF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311669.1;locus_tag=AC00_RS09470;product=endoribonuclease MazF;protein_id=WP_000254738.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 7973 8221 . - . ID=gene-AC00_RS09465;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=AC00_RS09465;old_locus_tag=AC00_3210 NZ_JJLU01000099.1 Protein Homology CDS 7973 8221 . - 0 ID=cds-WP_000581937.1;Parent=gene-AC00_RS09465;Dbxref=GenBank:WP_000581937.1;Name=WP_000581937.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311670.1;locus_tag=AC00_RS09465;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_000581937.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 8299 10533 . - . ID=gene-AC00_RS09460;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AC00_RS09460;old_locus_tag=AC00_3211 NZ_JJLU01000099.1 Protein Homology CDS 8299 10533 . - 0 ID=cds-WP_000226815.1;Parent=gene-AC00_RS09460;Dbxref=GenBank:WP_000226815.1;Name=WP_000226815.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311671.1;locus_tag=AC00_RS09460;product=GTP diphosphokinase;protein_id=WP_000226815.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 10581 11882 . - . ID=gene-AC00_RS09455;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=AC00_RS09455;old_locus_tag=AC00_3212 NZ_JJLU01000099.1 Protein Homology CDS 10581 11882 . - 0 ID=cds-WP_000046821.1;Parent=gene-AC00_RS09455;Dbxref=GenBank:WP_000046821.1;Name=WP_000046821.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417265.1;locus_tag=AC00_RS09455;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_000046821.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 11939 14695 . + . ID=gene-AC00_RS09450;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=AC00_RS09450;old_locus_tag=AC00_3213 NZ_JJLU01000099.1 Protein Homology CDS 11939 14695 . + 0 ID=cds-WP_001472119.1;Parent=gene-AC00_RS09450;Dbxref=GenBank:WP_001472119.1;Name=WP_001472119.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311673.1;locus_tag=AC00_RS09450;product=two-component sensor histidine kinase BarA;protein_id=WP_001472119.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 14927 16267 . - . ID=gene-AC00_RS09445;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=AC00_RS09445;old_locus_tag=AC00_3215 NZ_JJLU01000099.1 Protein Homology CDS 14927 16267 . - 0 ID=cds-WP_032281520.1;Parent=gene-AC00_RS09445;Dbxref=GenBank:WP_032281520.1;Name=WP_032281520.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311674.1;locus_tag=AC00_RS09445;product=glucarate dehydratase;protein_id=WP_032281520.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 16288 17628 . - . ID=gene-AC00_RS09440;Name=gudX;gbkey=Gene;gene=gudX;gene_biotype=protein_coding;locus_tag=AC00_RS09440;old_locus_tag=AC00_3216 NZ_JJLU01000099.1 Protein Homology CDS 16288 17628 . - 0 ID=cds-WP_000211779.1;Parent=gene-AC00_RS09440;Dbxref=GenBank:WP_000211779.1;Name=WP_000211779.1;gbkey=CDS;gene=gudX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417268.1;locus_tag=AC00_RS09440;product=enolase C-terminal domain-like protein;protein_id=WP_000211779.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 17630 18982 . - . ID=gene-AC00_RS09435;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=AC00_RS09435;old_locus_tag=AC00_3217 NZ_JJLU01000099.1 Protein Homology CDS 17630 18982 . - 0 ID=cds-WP_000097082.1;Parent=gene-AC00_RS09435;Dbxref=GenBank:WP_000097082.1;Name=WP_000097082.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417269.1;locus_tag=AC00_RS09435;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_000097082.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 19417 19866 . - . ID=gene-AC00_RS09430;Name=yqcA;gbkey=Gene;gene=yqcA;gene_biotype=protein_coding;locus_tag=AC00_RS09430;old_locus_tag=AC00_3219 NZ_JJLU01000099.1 Protein Homology CDS 19417 19866 . - 0 ID=cds-WP_000807764.1;Parent=gene-AC00_RS09430;Dbxref=GenBank:WP_000807764.1;Name=WP_000807764.1;Ontology_term=GO:0010181;gbkey=CDS;gene=yqcA;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=AC00_RS09430;product=flavodoxin;protein_id=WP_000807764.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 19884 20666 . - . ID=gene-AC00_RS09425;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=AC00_RS09425;old_locus_tag=AC00_3220 NZ_JJLU01000099.1 Protein Homology CDS 19884 20666 . - 0 ID=cds-WP_000890001.1;Parent=gene-AC00_RS09425;Dbxref=GenBank:WP_000890001.1;Name=WP_000890001.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417271.1;locus_tag=AC00_RS09425;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_000890001.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 20666 20995 . - . ID=gene-AC00_RS09420;Name=yqcC;gbkey=Gene;gene=yqcC;gene_biotype=protein_coding;locus_tag=AC00_RS09420;old_locus_tag=AC00_3221 NZ_JJLU01000099.1 Protein Homology CDS 20666 20995 . - 0 ID=cds-WP_000206991.1;Parent=gene-AC00_RS09420;Dbxref=GenBank:WP_000206991.1;Name=WP_000206991.1;gbkey=CDS;gene=yqcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311679.1;locus_tag=AC00_RS09420;product=YqcC family protein;protein_id=WP_000206991.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 21617 22162 . - . ID=gene-AC00_RS09415;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=AC00_RS09415;old_locus_tag=AC00_3222 NZ_JJLU01000099.1 Protein Homology CDS 21617 22162 . - 0 ID=cds-WP_000342431.1;Parent=gene-AC00_RS09415;Dbxref=GenBank:WP_000342431.1;Name=WP_000342431.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417273.1;locus_tag=AC00_RS09415;product=SecY-interacting protein;protein_id=WP_000342431.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 22230 23078 . + . ID=gene-AC00_RS09410;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AC00_RS09410;old_locus_tag=AC00_3223 NZ_JJLU01000099.1 Protein Homology CDS 22230 23078 . + 0 ID=cds-WP_032281521.1;Parent=gene-AC00_RS09410;Dbxref=GenBank:WP_032281521.1;Name=WP_032281521.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708588.1;locus_tag=AC00_RS09410;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_032281521.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 23190 24554 . + . ID=gene-AC00_RS09405;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=AC00_RS09405;old_locus_tag=AC00_3224 NZ_JJLU01000099.1 Protein Homology CDS 23190 24554 . + 0 ID=cds-WP_000627995.1;Parent=gene-AC00_RS09405;Dbxref=GenBank:WP_000627995.1;Name=WP_000627995.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311682.1;locus_tag=AC00_RS09405;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_000627995.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 25111 26400 . + . ID=gene-AC00_RS09400;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=AC00_RS09400;old_locus_tag=AC00_3225 NZ_JJLU01000099.1 Protein Homology CDS 25111 26400 . + 0 ID=cds-WP_000450476.1;Parent=gene-AC00_RS09400;Dbxref=GenBank:WP_000450476.1;Name=WP_000450476.1;gbkey=CDS;gene=sdaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311683.1;locus_tag=AC00_RS09400;product=HAAAP family serine/threonine permease SdaC;protein_id=WP_000450476.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 26458 27825 . + . ID=gene-AC00_RS09395;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=AC00_RS09395;old_locus_tag=AC00_3226 NZ_JJLU01000099.1 Protein Homology CDS 26458 27825 . + 0 ID=cds-WP_000626404.1;Parent=gene-AC00_RS09395;Dbxref=GenBank:WP_000626404.1;Name=WP_000626404.1;gbkey=CDS;gene=sdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708592.1;locus_tag=AC00_RS09395;product=L-serine ammonia-lyase II;protein_id=WP_000626404.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 27937 28692 . + . ID=gene-AC00_RS09390;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=AC00_RS09390;old_locus_tag=AC00_3227 NZ_JJLU01000099.1 Protein Homology CDS 27937 28692 . + 0 ID=cds-WP_032281522.1;Parent=gene-AC00_RS09390;Dbxref=GenBank:WP_032281522.1;Name=WP_032281522.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417278.4;locus_tag=AC00_RS09390;product=flap endonuclease Xni;protein_id=WP_032281522.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 28747 29895 . - . ID=gene-AC00_RS09385;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=AC00_RS09385;old_locus_tag=AC00_3228 NZ_JJLU01000099.1 Protein Homology CDS 28747 29895 . - 0 ID=cds-WP_000013588.1;Parent=gene-AC00_RS09385;Dbxref=GenBank:WP_000013588.1;Name=WP_000013588.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417279.2;locus_tag=AC00_RS09385;product=lactaldehyde reductase;protein_id=WP_000013588.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 29923 30570 . - . ID=gene-AC00_RS09380;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=AC00_RS09380;old_locus_tag=AC00_3229 NZ_JJLU01000099.1 Protein Homology CDS 29923 30570 . - 0 ID=cds-WP_000440775.1;Parent=gene-AC00_RS09380;Dbxref=GenBank:WP_000440775.1;Name=WP_000440775.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311687.1;locus_tag=AC00_RS09380;product=L-fuculose-phosphate aldolase;protein_id=WP_000440775.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 31117 32433 . + . ID=gene-AC00_RS09375;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=AC00_RS09375;old_locus_tag=AC00_3231 NZ_JJLU01000099.1 Protein Homology CDS 31117 32433 . + 0 ID=cds-WP_000528603.1;Parent=gene-AC00_RS09375;Dbxref=GenBank:WP_000528603.1;Name=WP_000528603.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417281.1;locus_tag=AC00_RS09375;product=L-fucose:H+ symporter permease;protein_id=WP_000528603.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 32466 34241 . + . ID=gene-AC00_RS09370;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AC00_RS09370;old_locus_tag=AC00_3232 NZ_JJLU01000099.1 Protein Homology CDS 32466 34241 . + 0 ID=cds-WP_000724153.1;Parent=gene-AC00_RS09370;Dbxref=GenBank:WP_000724153.1;Name=WP_000724153.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417282.1;locus_tag=AC00_RS09370;product=L-fucose isomerase;protein_id=WP_000724153.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 34350 35768 . + . ID=gene-AC00_RS09365;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=AC00_RS09365;old_locus_tag=AC00_3233 NZ_JJLU01000099.1 Protein Homology CDS 34350 35768 . + 0 ID=cds-WP_000808392.1;Parent=gene-AC00_RS09365;Dbxref=GenBank:WP_000808392.1;Name=WP_000808392.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417283.2;locus_tag=AC00_RS09365;product=L-fuculokinase;protein_id=WP_000808392.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 35770 36192 . + . ID=gene-AC00_RS09360;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=AC00_RS09360;old_locus_tag=AC00_3234 NZ_JJLU01000099.1 Protein Homology CDS 35770 36192 . + 0 ID=cds-WP_000920840.1;Parent=gene-AC00_RS09360;Dbxref=GenBank:WP_000920840.1;Name=WP_000920840.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311691.1;locus_tag=AC00_RS09360;product=L-fucose mutarotase;protein_id=WP_000920840.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 36250 36981 . + . ID=gene-AC00_RS09355;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=AC00_RS09355;old_locus_tag=AC00_3235 NZ_JJLU01000099.1 Protein Homology CDS 36250 36981 . + 0 ID=cds-WP_000642345.1;Parent=gene-AC00_RS09355;Dbxref=GenBank:WP_000642345.1;Name=WP_000642345.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311692.1;locus_tag=AC00_RS09355;product=L-fucose operon activator;protein_id=WP_000642345.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 37025 38125 . - . ID=gene-AC00_RS09350;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=AC00_RS09350;old_locus_tag=AC00_3236 NZ_JJLU01000099.1 Protein Homology CDS 37025 38125 . - 0 ID=cds-WP_001045520.1;Parent=gene-AC00_RS09350;Dbxref=GenBank:WP_001045520.1;Name=WP_001045520.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=AC00_RS09350;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_001045520.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 38118 38513 . - . ID=gene-AC00_RS09345;Name=ygdD;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=AC00_RS09345;old_locus_tag=AC00_3237 NZ_JJLU01000099.1 Protein Homology CDS 38118 38513 . - 0 ID=cds-WP_000203905.1;Parent=gene-AC00_RS09345;Dbxref=GenBank:WP_000203905.1;Name=WP_000203905.1;gbkey=CDS;gene=ygdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311694.1;locus_tag=AC00_RS09345;product=DUF423 domain-containing protein;protein_id=WP_000203905.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 38532 39449 . - . ID=gene-AC00_RS09340;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=AC00_RS09340;old_locus_tag=AC00_3238 NZ_JJLU01000099.1 Protein Homology CDS 38532 39449 . - 0 ID=cds-WP_000044401.1;Parent=gene-AC00_RS09340;Dbxref=GenBank:WP_000044401.1;Name=WP_000044401.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=AC00_RS09340;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_000044401.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 39800 40027 . - . ID=gene-AC00_RS09335;Name=ygdI;gbkey=Gene;gene=ygdI;gene_biotype=protein_coding;locus_tag=AC00_RS09335;old_locus_tag=AC00_3239 NZ_JJLU01000099.1 Protein Homology CDS 39800 40027 . - 0 ID=cds-WP_000750398.1;Parent=gene-AC00_RS09335;Dbxref=GenBank:WP_000750398.1;Name=WP_000750398.1;gbkey=CDS;gene=ygdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=AC00_RS09335;product=YgdI/YgdR family lipoprotein;protein_id=WP_000750398.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 40219 41424 . + . ID=gene-AC00_RS09330;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=AC00_RS09330;old_locus_tag=AC00_3240 NZ_JJLU01000099.1 Protein Homology CDS 40219 41424 . + 0 ID=cds-WP_032281523.1;Parent=gene-AC00_RS09330;Dbxref=GenBank:WP_032281523.1;Name=WP_032281523.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=AC00_RS09330;product=cysteine desulfurase CsdA;protein_id=WP_032281523.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 41424 41867 . + . ID=gene-AC00_RS09325;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=AC00_RS09325;old_locus_tag=AC00_3241 NZ_JJLU01000099.1 Protein Homology CDS 41424 41867 . + 0 ID=cds-WP_000184261.1;Parent=gene-AC00_RS09325;Dbxref=GenBank:WP_000184261.1;Name=WP_000184261.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311698.1;locus_tag=AC00_RS09325;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_000184261.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 41918 42724 . - . ID=gene-AC00_RS09320;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=AC00_RS09320;old_locus_tag=AC00_3242 NZ_JJLU01000099.1 Protein Homology CDS 41918 42724 . - 0 ID=cds-WP_000117724.1;Parent=gene-AC00_RS09320;Dbxref=GenBank:WP_000117724.1;Name=WP_000117724.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708606.1;locus_tag=AC00_RS09320;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_000117724.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 42963 44060 . - . ID=gene-AC00_RS09315;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AC00_RS09315;old_locus_tag=AC00_3243 NZ_JJLU01000099.1 Protein Homology CDS 42963 44060 . - 0 ID=cds-WP_000678646.1;Parent=gene-AC00_RS09315;Dbxref=GenBank:WP_000678646.1;Name=WP_000678646.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=AC00_RS09315;product=murein transglycosylase A;protein_id=WP_000678646.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 44269 44345 . + . ID=gene-AC00_RS09310;Name=AC00_RS09310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09310;old_locus_tag=AC00_3244 NZ_JJLU01000099.1 tRNAscan-SE tRNA 44269 44345 . + . ID=rna-AC00_RS09310;Parent=gene-AC00_RS09310;anticodon=(pos:44303..44305);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09310;product=tRNA-Met NZ_JJLU01000099.1 tRNAscan-SE exon 44269 44345 . + . ID=exon-AC00_RS09310-1;Parent=rna-AC00_RS09310;anticodon=(pos:44303..44305);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09310;product=tRNA-Met NZ_JJLU01000099.1 RefSeq gene 44379 44455 . + . ID=gene-AC00_RS09305;Name=AC00_RS09305;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09305;old_locus_tag=AC00_3245 NZ_JJLU01000099.1 tRNAscan-SE tRNA 44379 44455 . + . ID=rna-AC00_RS09305;Parent=gene-AC00_RS09305;anticodon=(pos:44413..44415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09305;product=tRNA-Met NZ_JJLU01000099.1 tRNAscan-SE exon 44379 44455 . + . ID=exon-AC00_RS09305-1;Parent=rna-AC00_RS09305;anticodon=(pos:44413..44415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09305;product=tRNA-Met NZ_JJLU01000099.1 RefSeq gene 44490 44566 . + . ID=gene-AC00_RS09300;Name=AC00_RS09300;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09300;old_locus_tag=AC00_3246 NZ_JJLU01000099.1 tRNAscan-SE tRNA 44490 44566 . + . ID=rna-AC00_RS09300;Parent=gene-AC00_RS09300;anticodon=(pos:44524..44526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09300;product=tRNA-Met NZ_JJLU01000099.1 tRNAscan-SE exon 44490 44566 . + . ID=exon-AC00_RS09300-1;Parent=rna-AC00_RS09300;anticodon=(pos:44524..44526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09300;product=tRNA-Met NZ_JJLU01000099.1 RefSeq gene 44640 45893 . - . ID=gene-AC00_RS09295;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=AC00_RS09295;old_locus_tag=AC00_3247 NZ_JJLU01000099.1 Protein Homology CDS 44640 45893 . - 0 ID=cds-WP_000016907.1;Parent=gene-AC00_RS09295;Dbxref=GenBank:WP_000016907.1;Name=WP_000016907.1;Note=Like AmiA%2C dependent on TAT (Twin-Arginine Translocation) system for export.;gbkey=CDS;gene=amiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=AC00_RS09295;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_000016907.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 46125 47456 . + . ID=gene-AC00_RS09290;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=AC00_RS09290;old_locus_tag=AC00_3248 NZ_JJLU01000099.1 Protein Homology CDS 46125 47456 . + 0 ID=cds-WP_032281524.1;Parent=gene-AC00_RS09290;Dbxref=GenBank:WP_032281524.1;Name=WP_032281524.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=AC00_RS09290;product=amino-acid N-acetyltransferase;protein_id=WP_032281524.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 47518 49344 . - . ID=gene-AC00_RS09285;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AC00_RS09285;old_locus_tag=AC00_3249 NZ_JJLU01000099.1 Protein Homology CDS 47518 49344 . - 0 ID=cds-WP_032281525.1;Parent=gene-AC00_RS09285;Dbxref=GenBank:WP_032281525.1;Name=WP_032281525.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417296.1;locus_tag=AC00_RS09285;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_032281525.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 49344 52886 . - . ID=gene-AC00_RS09280;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AC00_RS09280;old_locus_tag=AC00_3250 NZ_JJLU01000099.1 Protein Homology CDS 49344 52886 . - 0 ID=cds-WP_032281526.1;Parent=gene-AC00_RS09280;Dbxref=GenBank:WP_032281526.1;Name=WP_032281526.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417297.1;locus_tag=AC00_RS09280;product=exodeoxyribonuclease V subunit beta;protein_id=WP_032281526.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 52879 55767 . - . ID=gene-AC00_RS09275;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=AC00_RS09275;old_locus_tag=AC00_3251 NZ_JJLU01000099.1 Protein Homology CDS 52879 55767 . - 0 ID=cds-WP_032281527.1;Parent=gene-AC00_RS09275;Dbxref=GenBank:WP_032281527.1;Name=WP_032281527.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=AC00_RS09275;product=pitrilysin;protein_id=WP_032281527.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 55943 59311 . - . ID=gene-AC00_RS09270;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AC00_RS09270;old_locus_tag=AC00_3252 NZ_JJLU01000099.1 Protein Homology CDS 55943 59311 . - 0 ID=cds-WP_032281528.1;Parent=gene-AC00_RS09270;Dbxref=GenBank:WP_032281528.1;Name=WP_032281528.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=AC00_RS09270;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_032281528.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 59324 59647 . - . ID=gene-AC00_RS30470;Name=ppdC;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=AC00_RS30470 NZ_JJLU01000099.1 Protein Homology CDS 59324 59647 . - 0 ID=cds-WP_032222473.1;Parent=gene-AC00_RS30470;Dbxref=GenBank:WP_032222473.1;Name=WP_032222473.1;gbkey=CDS;gene=ppdC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417300.1;locus_tag=AC00_RS30470;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_032222473.1;transl_table=11 NZ_JJLU01000099.1 RefSeq pseudogene 59632 60040 . - . ID=gene-AC00_RS30475;Name=ygdB;gbkey=Gene;gene=ygdB;gene_biotype=pseudogene;locus_tag=AC00_RS30475;pseudo=true NZ_JJLU01000099.1 Protein Homology CDS 59632 60040 . - 0 ID=cds-AC00_RS30475;Parent=gene-AC00_RS30475;Note=frameshifted;gbkey=CDS;gene=ygdB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417301.4;locus_tag=AC00_RS30475;product=DUF2509 family protein;pseudo=true;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 60037 60600 . - . ID=gene-AC00_RS09265;Name=ppdB;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=AC00_RS09265;old_locus_tag=AC00_3254 NZ_JJLU01000099.1 Protein Homology CDS 60037 60600 . - 0 ID=cds-WP_001144298.1;Parent=gene-AC00_RS09265;Dbxref=GenBank:WP_001144298.1;Name=WP_001144298.1;gbkey=CDS;gene=ppdB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439276.1;locus_tag=AC00_RS09265;product=prepilin peptidase-dependent protein;protein_id=WP_001144298.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 60591 61061 . - . ID=gene-AC00_RS09260;Name=ppdA;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=AC00_RS09260;old_locus_tag=AC00_3255 NZ_JJLU01000099.1 Protein Homology CDS 60591 61061 . - 0 ID=cds-WP_000857056.1;Parent=gene-AC00_RS09260;Dbxref=GenBank:WP_000857056.1;Name=WP_000857056.1;gbkey=CDS;gene=ppdA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417303.1;locus_tag=AC00_RS09260;product=prepilin peptidase-dependent protein;protein_id=WP_000857056.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 61246 62040 . - . ID=gene-AC00_RS09255;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=AC00_RS09255;old_locus_tag=AC00_3256 NZ_JJLU01000099.1 Protein Homology CDS 61246 62040 . - 0 ID=cds-WP_000816232.1;Parent=gene-AC00_RS09255;Dbxref=GenBank:WP_000816232.1;Name=WP_000816232.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=AC00_RS09255;product=thymidylate synthase;protein_id=WP_000816232.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 62047 62922 . - . ID=gene-AC00_RS09250;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=AC00_RS09250;old_locus_tag=AC00_3257 NZ_JJLU01000099.1 Protein Homology CDS 62047 62922 . - 0 ID=cds-WP_000204658.1;Parent=gene-AC00_RS09250;Dbxref=GenBank:WP_000204658.1;Name=WP_000204658.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311712.1;locus_tag=AC00_RS09250;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_000204658.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 63073 65319 . - . ID=gene-AC00_RS09245;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC00_RS09245;old_locus_tag=AC00_3258 NZ_JJLU01000099.1 Protein Homology CDS 63073 65319 . - 0 ID=cds-WP_032288282.1;Parent=gene-AC00_RS09245;Dbxref=GenBank:WP_032288282.1;Name=WP_032288282.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=AC00_RS09245;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032288282.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 65332 65862 . - . ID=gene-AC00_RS09240;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=AC00_RS09240;old_locus_tag=AC00_3259 NZ_JJLU01000099.1 Protein Homology CDS 65332 65862 . - 0 ID=cds-WP_000564489.1;Parent=gene-AC00_RS09240;Dbxref=GenBank:WP_000564489.1;Name=WP_000564489.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=AC00_RS09240;product=RNA pyrophosphohydrolase;protein_id=WP_000564489.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 66215 66361 . - . ID=gene-AC00_RS31560;Name=ygdT;gbkey=Gene;gene=ygdT;gene_biotype=protein_coding;locus_tag=AC00_RS31560 NZ_JJLU01000099.1 Protein Homology CDS 66215 66361 . - 0 ID=cds-WP_001305801.1;Parent=gene-AC00_RS31560;Dbxref=GenBank:WP_001305801.1;Name=WP_001305801.1;gbkey=CDS;gene=ygdT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502650.1;locus_tag=AC00_RS31560;product=protein YgdT;protein_id=WP_001305801.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 66547 67236 . + . ID=gene-AC00_RS09235;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=AC00_RS09235;old_locus_tag=AC00_3260 NZ_JJLU01000099.1 Protein Homology CDS 66547 67236 . + 0 ID=cds-WP_000082188.1;Parent=gene-AC00_RS09235;Dbxref=GenBank:WP_000082188.1;Name=WP_000082188.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311715.1;locus_tag=AC00_RS09235;product=DNA mismatch repair endonuclease MutH;protein_id=WP_000082188.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 67305 68018 . + . ID=gene-AC00_RS09230;Name=ygdQ;gbkey=Gene;gene=ygdQ;gene_biotype=protein_coding;locus_tag=AC00_RS09230;old_locus_tag=AC00_3261 NZ_JJLU01000099.1 Protein Homology CDS 67305 68018 . + 0 ID=cds-WP_000895624.1;Parent=gene-AC00_RS09230;Dbxref=GenBank:WP_000895624.1;Name=WP_000895624.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=ygdQ;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311716.1;locus_tag=AC00_RS09230;product=TerC family protein;protein_id=WP_000895624.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 68156 68374 . + . ID=gene-AC00_RS09225;Name=ygdR;gbkey=Gene;gene=ygdR;gene_biotype=protein_coding;locus_tag=AC00_RS09225;old_locus_tag=AC00_3262 NZ_JJLU01000099.1 Protein Homology CDS 68156 68374 . + 0 ID=cds-WP_000758655.1;Parent=gene-AC00_RS09225;Dbxref=GenBank:WP_000758655.1;Name=WP_000758655.1;gbkey=CDS;gene=ygdR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311717.1;locus_tag=AC00_RS09225;product=lipoprotein YgdR;protein_id=WP_000758655.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 68482 69522 . + . ID=gene-AC00_RS09220;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=AC00_RS09220;old_locus_tag=AC00_3263 NZ_JJLU01000099.1 Protein Homology CDS 68482 69522 . + 0 ID=cds-WP_032281530.1;Parent=gene-AC00_RS09220;Dbxref=GenBank:WP_032281530.1;Name=WP_032281530.1;Ontology_term=GO:0047834;gbkey=CDS;gene=tas;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=AC00_RS09220;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_032281530.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 69554 70747 . - . ID=gene-AC00_RS09215;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=AC00_RS09215;old_locus_tag=AC00_3264 NZ_JJLU01000099.1 Protein Homology CDS 69554 70747 . - 0 ID=cds-WP_000004624.1;Parent=gene-AC00_RS09215;Dbxref=GenBank:WP_000004624.1;Name=WP_000004624.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311719.1;locus_tag=AC00_RS09215;product=lysophospholipid transporter LplT;protein_id=WP_000004624.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 70740 72899 . - . ID=gene-AC00_RS09210;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=AC00_RS09210;old_locus_tag=AC00_3265 NZ_JJLU01000099.1 Protein Homology CDS 70740 72899 . - 0 ID=cds-WP_032281531.1;Parent=gene-AC00_RS09210;Dbxref=GenBank:WP_032281531.1;Name=WP_032281531.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311720.1;locus_tag=AC00_RS09210;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_032281531.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 73485 74516 . + . ID=gene-AC00_RS09205;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=AC00_RS09205;old_locus_tag=AC00_3266 NZ_JJLU01000099.1 Protein Homology CDS 73485 74516 . + 0 ID=cds-WP_000201064.1;Parent=gene-AC00_RS09205;Dbxref=GenBank:WP_000201064.1;Name=WP_000201064.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417314.1;locus_tag=AC00_RS09205;product=HTH-type transcriptional regulator GalR;protein_id=WP_000201064.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 74523 75785 . - . ID=gene-AC00_RS09200;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=AC00_RS09200;old_locus_tag=AC00_3267 NZ_JJLU01000099.1 Protein Homology CDS 74523 75785 . - 0 ID=cds-WP_032281532.1;Parent=gene-AC00_RS09200;Dbxref=GenBank:WP_032281532.1;Name=WP_032281532.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417315.1;locus_tag=AC00_RS09200;product=diaminopimelate decarboxylase;protein_id=WP_032281532.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 75909 76844 . + . ID=gene-AC00_RS09195;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=AC00_RS09195;old_locus_tag=AC00_3268 NZ_JJLU01000099.1 Protein Homology CDS 75909 76844 . + 0 ID=cds-WP_032281533.1;Parent=gene-AC00_RS09195;Dbxref=GenBank:WP_032281533.1;Name=WP_032281533.1;gbkey=CDS;gene=lysR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311723.1;locus_tag=AC00_RS09195;product=DNA-binding transcriptional regulator LysR;protein_id=WP_032281533.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 76831 77523 . - . ID=gene-AC00_RS09190;Name=ygeA;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=AC00_RS09190;old_locus_tag=AC00_3269 NZ_JJLU01000099.1 Protein Homology CDS 76831 77523 . - 0 ID=cds-WP_032281534.1;Parent=gene-AC00_RS09190;Dbxref=GenBank:WP_032281534.1;Name=WP_032281534.1;gbkey=CDS;gene=ygeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=AC00_RS09190;product=amino acid racemase;protein_id=WP_032281534.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 77652 79070 . - . ID=gene-AC00_RS09185;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=AC00_RS09185;old_locus_tag=AC00_3270 NZ_JJLU01000099.1 Protein Homology CDS 77652 79070 . - 0 ID=cds-WP_000256436.1;Parent=gene-AC00_RS09185;Dbxref=GenBank:WP_000256436.1;Name=WP_000256436.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311725.1;locus_tag=AC00_RS09185;product=arabinose-proton symporter AraE;protein_id=WP_000256436.1;transl_table=11 NZ_JJLU01000099.1 RefSeq gene 79383 79607 . + . ID=gene-AC00_RS28085;Name=AC00_RS28085;end_range=79607,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28085;old_locus_tag=AC00_3271;partial=true NZ_JJLU01000099.1 Protein Homology CDS 79383 79607 . + 0 ID=cds-WP_001482752.1-3;Parent=gene-AC00_RS28085;Dbxref=GenBank:WP_001482752.1;Name=WP_001482752.1;Ontology_term=GO:0006313;end_range=79607,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28085;partial=true;product=IS1 family transposase;protein_id=WP_001482752.1;transl_table=11 ##sequence-region NZ_JJLU01000100.1 1 5481 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000100.1 RefSeq region 1 5481 . + . ID=NZ_JJLU01000100.1:1..5481;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000100.1 RefSeq gene 1 246 . + . ID=gene-AC00_RS09180;Name=AC00_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09180;old_locus_tag=AC00_3272;partial=true;start_range=.,1 NZ_JJLU01000100.1 Protein Homology CDS 1 246 . + 0 ID=cds-WP_000055351.1;Parent=gene-AC00_RS09180;Dbxref=GenBank:WP_000055351.1;Name=WP_000055351.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS09180;partial=true;product=IS1 family transposase;protein_id=WP_000055351.1;start_range=.,1;transl_table=11 NZ_JJLU01000100.1 RefSeq gene 321 1082 . - . ID=gene-AC00_RS09175;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=AC00_RS09175;old_locus_tag=AC00_3273 NZ_JJLU01000100.1 Protein Homology CDS 321 1082 . - 0 ID=cds-WP_000603518.1;Parent=gene-AC00_RS09175;Dbxref=GenBank:WP_000603518.1;Name=WP_000603518.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311726.1;locus_tag=AC00_RS09175;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_000603518.1;transl_table=11 NZ_JJLU01000100.1 RefSeq gene 1112 1948 . - . ID=gene-AC00_RS09170;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=AC00_RS09170;old_locus_tag=AC00_3274 NZ_JJLU01000100.1 Protein Homology CDS 1112 1948 . - 0 ID=cds-WP_000383248.1;Parent=gene-AC00_RS09170;Dbxref=GenBank:WP_000383248.1;Name=WP_000383248.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417320.1;locus_tag=AC00_RS09170;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_000383248.1;transl_table=11 NZ_JJLU01000100.1 RefSeq gene 2235 3416 . - . ID=gene-AC00_RS09165;Name=AC00_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09165;old_locus_tag=AC00_3275 NZ_JJLU01000100.1 Protein Homology CDS 2235 3416 . - 0 ID=cds-WP_032288284.1;Parent=gene-AC00_RS09165;Dbxref=GenBank:WP_032288284.1;Name=WP_032288284.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417321.2;locus_tag=AC00_RS09165;product=acetyl-CoA C-acetyltransferase;protein_id=WP_032288284.1;transl_table=11 NZ_JJLU01000100.1 RefSeq gene 3671 4900 . + . ID=gene-AC00_RS09160;Name=AC00_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09160;old_locus_tag=AC00_3276 NZ_JJLU01000100.1 Protein Homology CDS 3671 4900 . + 0 ID=cds-WP_000065946.1;Parent=gene-AC00_RS09160;Dbxref=GenBank:WP_000065946.1;Name=WP_000065946.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311729.1;locus_tag=AC00_RS09160;product=amino acid permease;protein_id=WP_000065946.1;transl_table=11 NZ_JJLU01000100.1 RefSeq pseudogene 5092 5481 . - . ID=gene-AC00_RS09155;Name=AC00_RS09155;end_range=5481,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS09155;old_locus_tag=AC00_3277;partial=true;pseudo=true NZ_JJLU01000100.1 Protein Homology CDS 5092 5481 . - 0 ID=cds-AC00_RS09155;Parent=gene-AC00_RS09155;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=5481,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS09155;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000101.1 1 1728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000101.1 RefSeq region 1 1728 . + . ID=NZ_JJLU01000101.1:1..1728;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000101.1 RefSeq pseudogene 1 348 . + . ID=gene-AC00_RS09150;Name=AC00_RS09150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS09150;old_locus_tag=AC00_3278;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000101.1 Protein Homology CDS 1 348 . + 0 ID=cds-AC00_RS09150;Parent=gene-AC00_RS09150;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS09150;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000101.1 RefSeq pseudogene 363 1451 . + . ID=gene-AC00_RS29725;Name=AC00_RS29725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29725;partial=true;pseudo=true;start_range=.,363 NZ_JJLU01000101.1 Protein Homology CDS 363 1451 . + 0 ID=cds-AC00_RS29725;Parent=gene-AC00_RS29725;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018456.1;locus_tag=AC00_RS29725;partial=true;product=type III effector protein;pseudo=true;start_range=.,363;transl_table=11 NZ_JJLU01000101.1 RefSeq gene 1485 1728 . + . ID=gene-AC00_RS09140;Name=AC00_RS09140;end_range=1728,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09140;old_locus_tag=AC00_3280;partial=true NZ_JJLU01000101.1 Protein Homology CDS 1485 1728 . + 0 ID=cds-WP_001530252.1;Parent=gene-AC00_RS09140;Dbxref=GenBank:WP_001530252.1;Name=WP_001530252.1;end_range=1728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC00_RS09140;partial=true;product=IS1-like element transposase;protein_id=WP_001530252.1;transl_table=11 ##sequence-region NZ_JJLU01000102.1 1 81887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000102.1 RefSeq region 1 81887 . + . ID=NZ_JJLU01000102.1:1..81887;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000102.1 RefSeq gene 86 1314 . + . ID=gene-AC00_RS09130;Name=AC00_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS09130;old_locus_tag=AC00_3282 NZ_JJLU01000102.1 Protein Homology CDS 86 401 . + 0 ID=cds-WP_088895425.1;Parent=gene-AC00_RS09130;Dbxref=GenBank:WP_088895425.1;Name=WP_088895425.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AC00_RS09130;product=IS3-like element IS2 family transposase;protein_id=WP_088895425.1;transl_table=11 NZ_JJLU01000102.1 Protein Homology CDS 401 1314 . + 2 ID=cds-WP_088895425.1;Parent=gene-AC00_RS09130;Dbxref=GenBank:WP_088895425.1;Name=WP_088895425.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=AC00_RS09130;product=IS3-like element IS2 family transposase;protein_id=WP_088895425.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 1620 1693 . - . ID=gene-AC00_RS09125;Name=AC00_RS09125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS09125;old_locus_tag=AC00_3283 NZ_JJLU01000102.1 tRNAscan-SE tRNA 1620 1693 . - . ID=rna-AC00_RS09125;Parent=gene-AC00_RS09125;anticodon=(pos:complement(1659..1661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09125;product=tRNA-Gly NZ_JJLU01000102.1 tRNAscan-SE exon 1620 1693 . - . ID=exon-AC00_RS09125-1;Parent=rna-AC00_RS09125;anticodon=(pos:complement(1659..1661));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS09125;product=tRNA-Gly NZ_JJLU01000102.1 RefSeq gene 1772 2527 . - . ID=gene-AC00_RS09120;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=AC00_RS09120;old_locus_tag=AC00_3284 NZ_JJLU01000102.1 Protein Homology CDS 1772 2527 . - 0 ID=cds-WP_001272558.1;Parent=gene-AC00_RS09120;Dbxref=GenBank:WP_001272558.1;Name=WP_001272558.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311765.2;locus_tag=AC00_RS09120;product=amidase activator ActS;protein_id=WP_001272558.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 2943 5240 . + . ID=gene-AC00_RS09115;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=AC00_RS09115;old_locus_tag=AC00_3286 NZ_JJLU01000102.1 Protein Homology CDS 2943 5240 . + 0 ID=cds-WP_032281537.1;Parent=gene-AC00_RS09115;Dbxref=GenBank:WP_032281537.1;Name=WP_032281537.1;Ontology_term=GO:0005506,GO:0016491;gbkey=CDS;gene=xdhA;go_function=iron ion binding|0005506||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708647.1;locus_tag=AC00_RS09115;product=xanthine dehydrogenase molybdenum-binding subunit XdhA;protein_id=WP_032281537.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 5251 6129 . + . ID=gene-AC00_RS09110;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=AC00_RS09110;old_locus_tag=AC00_3287 NZ_JJLU01000102.1 Protein Homology CDS 5251 6129 . + 0 ID=cds-WP_000459173.1;Parent=gene-AC00_RS09110;Dbxref=GenBank:WP_000459173.1;Name=WP_000459173.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=xdhB;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311767.1;locus_tag=AC00_RS09110;product=xanthine dehydrogenase FAD-binding subunit XdhB;protein_id=WP_000459173.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 6126 6605 . + . ID=gene-AC00_RS09105;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=AC00_RS09105;old_locus_tag=AC00_3288 NZ_JJLU01000102.1 Protein Homology CDS 6126 6605 . + 0 ID=cds-WP_001016605.1;Parent=gene-AC00_RS09105;Dbxref=GenBank:WP_001016605.1;Name=WP_001016605.1;gbkey=CDS;gene=xdhC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417344.1;locus_tag=AC00_RS09105;product=xanthine dehydrogenase iron sulfur-binding subunit XdhC;protein_id=WP_001016605.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 6645 8423 . - . ID=gene-AC00_RS09100;Name=ygeV;gbkey=Gene;gene=ygeV;gene_biotype=protein_coding;locus_tag=AC00_RS09100;old_locus_tag=AC00_3289 NZ_JJLU01000102.1 Protein Homology CDS 6645 8423 . - 0 ID=cds-WP_028131823.1;Parent=gene-AC00_RS09100;Dbxref=GenBank:WP_028131823.1;Name=WP_028131823.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=ygeV;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311769.1;locus_tag=AC00_RS09100;product=sigma-54 interaction domain-containing protein;protein_id=WP_028131823.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 8902 10089 . + . ID=gene-AC00_RS09095;Name=ygeW;gbkey=Gene;gene=ygeW;gene_biotype=protein_coding;locus_tag=AC00_RS09095;old_locus_tag=AC00_3290 NZ_JJLU01000102.1 Protein Homology CDS 8902 10089 . + 0 ID=cds-WP_000859787.1;Parent=gene-AC00_RS09095;Dbxref=GenBank:WP_000859787.1;Name=WP_000859787.1;gbkey=CDS;gene=ygeW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311770.2;locus_tag=AC00_RS09095;product=knotted carbamoyltransferase YgeW;protein_id=WP_000859787.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 10147 11343 . + . ID=gene-AC00_RS09090;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=AC00_RS09090;old_locus_tag=AC00_3291 NZ_JJLU01000102.1 Protein Homology CDS 10147 11343 . + 0 ID=cds-WP_000110493.1;Parent=gene-AC00_RS09090;Dbxref=GenBank:WP_000110493.1;Name=WP_000110493.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311771.1;locus_tag=AC00_RS09090;product=diaminopropionate ammonia-lyase;protein_id=WP_000110493.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 11401 12612 . + . ID=gene-AC00_RS09085;Name=ygeY;gbkey=Gene;gene=ygeY;gene_biotype=protein_coding;locus_tag=AC00_RS09085;old_locus_tag=AC00_3292 NZ_JJLU01000102.1 Protein Homology CDS 11401 12612 . + 0 ID=cds-WP_032281538.1;Parent=gene-AC00_RS09085;Dbxref=GenBank:WP_032281538.1;Name=WP_032281538.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ygeY;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311772.1;locus_tag=AC00_RS09085;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_032281538.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 12665 14050 . + . ID=gene-AC00_RS09080;Name=hyuA;gbkey=Gene;gene=hyuA;gene_biotype=protein_coding;locus_tag=AC00_RS09080;old_locus_tag=AC00_3293 NZ_JJLU01000102.1 Protein Homology CDS 12665 14050 . + 0 ID=cds-WP_001264452.1;Parent=gene-AC00_RS09080;Dbxref=GenBank:WP_001264452.1;Name=WP_001264452.1;gbkey=CDS;gene=hyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311773.2;locus_tag=AC00_RS09080;product=D-phenylhydantoinase;protein_id=WP_001264452.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 14098 15030 . + . ID=gene-AC00_RS09075;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=AC00_RS09075;old_locus_tag=AC00_3294 NZ_JJLU01000102.1 Protein Homology CDS 14098 15030 . + 0 ID=cds-WP_000037995.1;Parent=gene-AC00_RS09075;Dbxref=GenBank:WP_000037995.1;Name=WP_000037995.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311774.1;locus_tag=AC00_RS09075;product=carbamate kinase;protein_id=WP_000037995.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 15071 16696 . - . ID=gene-AC00_RS09070;Name=yqeB;gbkey=Gene;gene=yqeB;gene_biotype=protein_coding;locus_tag=AC00_RS09070;old_locus_tag=AC00_3295 NZ_JJLU01000102.1 Protein Homology CDS 15071 16696 . - 0 ID=cds-WP_032281539.1;Parent=gene-AC00_RS09070;Dbxref=GenBank:WP_032281539.1;Name=WP_032281539.1;gbkey=CDS;gene=yqeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417351.1;locus_tag=AC00_RS09070;product=selenium-dependent molybdenum cofactor biosynthesis protein YqeB;protein_id=WP_032281539.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 16744 17514 . - . ID=gene-AC00_RS09065;Name=yqeC;gbkey=Gene;gene=yqeC;gene_biotype=protein_coding;locus_tag=AC00_RS09065;old_locus_tag=AC00_3296 NZ_JJLU01000102.1 Protein Homology CDS 16744 17514 . - 0 ID=cds-WP_032281542.1;Parent=gene-AC00_RS09065;Dbxref=GenBank:WP_032281542.1;Name=WP_032281542.1;gbkey=CDS;gene=yqeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417352.2;locus_tag=AC00_RS09065;product=selenium cofactor biosynthesis protein YqeC;protein_id=WP_032281542.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 17617 18195 . + . ID=gene-AC00_RS09060;Name=mocA;gbkey=Gene;gene=mocA;gene_biotype=protein_coding;locus_tag=AC00_RS09060;old_locus_tag=AC00_3297 NZ_JJLU01000102.1 Protein Homology CDS 17617 18195 . + 0 ID=cds-WP_001272850.1;Parent=gene-AC00_RS09060;Dbxref=GenBank:WP_001272850.1;Name=WP_001272850.1;Ontology_term=GO:0032324,GO:0070567;gbkey=CDS;gene=mocA;go_function=cytidylyltransferase activity|0070567||IEA;go_process=molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417353.1;locus_tag=AC00_RS09060;product=molybdenum cofactor cytidylyltransferase;protein_id=WP_001272850.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 18517 21615 . + . ID=gene-AC00_RS09055;Name=ygfK;gbkey=Gene;gene=ygfK;gene_biotype=protein_coding;locus_tag=AC00_RS09055;old_locus_tag=AC00_3298 NZ_JJLU01000102.1 Protein Homology CDS 18517 21615 . + 0 ID=cds-WP_032281544.1;Parent=gene-AC00_RS09055;Dbxref=GenBank:WP_032281544.1;Name=WP_032281544.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfK;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417354.1;locus_tag=AC00_RS09055;product=putative selenate reductase subunit YgfK;protein_id=WP_032281544.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 21618 22946 . + . ID=gene-AC00_RS09050;Name=ssnA;gbkey=Gene;gene=ssnA;gene_biotype=protein_coding;locus_tag=AC00_RS09050;old_locus_tag=AC00_3299 NZ_JJLU01000102.1 Protein Homology CDS 21618 22946 . + 0 ID=cds-WP_032281545.1;Parent=gene-AC00_RS09050;Dbxref=GenBank:WP_032281545.1;Name=WP_032281545.1;Ontology_term=GO:0016810;gbkey=CDS;gene=ssnA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311779.1;locus_tag=AC00_RS09050;product=putative aminohydrolase SsnA;protein_id=WP_032281545.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 22997 23776 . + . ID=gene-AC00_RS09045;Name=ygfM;gbkey=Gene;gene=ygfM;gene_biotype=protein_coding;locus_tag=AC00_RS09045;old_locus_tag=AC00_3300 NZ_JJLU01000102.1 Protein Homology CDS 22997 23776 . + 0 ID=cds-WP_032281546.1;Parent=gene-AC00_RS09045;Dbxref=GenBank:WP_032281546.1;Name=WP_032281546.1;gbkey=CDS;gene=ygfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311780.1;locus_tag=AC00_RS09045;product=molybdopterin-dependent oxidoreductase FAD-binding subunit;protein_id=WP_032281546.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 23773 26643 . + . ID=gene-AC00_RS09040;Name=xdhD;gbkey=Gene;gene=xdhD;gene_biotype=protein_coding;locus_tag=AC00_RS09040;old_locus_tag=AC00_3301 NZ_JJLU01000102.1 Protein Homology CDS 23773 26643 . + 0 ID=cds-WP_032281547.1;Parent=gene-AC00_RS09040;Dbxref=GenBank:WP_032281547.1;Name=WP_032281547.1;gbkey=CDS;gene=xdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417357.1;locus_tag=AC00_RS09040;product=molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit;protein_id=WP_032281547.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 26808 28208 . + . ID=gene-AC00_RS09035;Name=xanQ;gbkey=Gene;gene=xanQ;gene_biotype=protein_coding;locus_tag=AC00_RS09035;old_locus_tag=AC00_3302 NZ_JJLU01000102.1 Protein Homology CDS 26808 28208 . + 0 ID=cds-WP_001280192.1;Parent=gene-AC00_RS09035;Dbxref=GenBank:WP_001280192.1;Name=WP_001280192.1;gbkey=CDS;gene=xanQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417358.2;locus_tag=AC00_RS09035;product=xanthine/proton symporter XanQ;protein_id=WP_001280192.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 28226 29542 . + . ID=gene-AC00_RS09030;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=AC00_RS09030;old_locus_tag=AC00_3303 NZ_JJLU01000102.1 Protein Homology CDS 28226 29542 . + 0 ID=cds-WP_001299798.1;Parent=gene-AC00_RS09030;Dbxref=GenBank:WP_001299798.1;Name=WP_001299798.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311783.2;locus_tag=AC00_RS09030;product=guanine deaminase;protein_id=WP_001299798.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 29578 30945 . + . ID=gene-AC00_RS09025;Name=ghxQ;gbkey=Gene;gene=ghxQ;gene_biotype=protein_coding;gene_synonym=ygfQ;locus_tag=AC00_RS09025;old_locus_tag=AC00_3304 NZ_JJLU01000102.1 Protein Homology CDS 29578 30945 . + 0 ID=cds-WP_000012163.1;Parent=gene-AC00_RS09025;Dbxref=GenBank:WP_000012163.1;Name=WP_000012163.1;gbkey=CDS;gene=ghxQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311784.1;locus_tag=AC00_RS09025;product=guanine/hypoxanthine transporter GhxQ;protein_id=WP_000012163.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 30981 31469 . - . ID=gene-AC00_RS09020;Name=ygfS;gbkey=Gene;gene=ygfS;gene_biotype=protein_coding;locus_tag=AC00_RS09020;old_locus_tag=AC00_3305 NZ_JJLU01000102.1 Protein Homology CDS 30981 31469 . - 0 ID=cds-WP_000838411.1;Parent=gene-AC00_RS09020;Dbxref=GenBank:WP_000838411.1;Name=WP_000838411.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;gene=ygfS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417362.4;locus_tag=AC00_RS09020;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_000838411.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 31469 33388 . - . ID=gene-AC00_RS09015;Name=ygfT;gbkey=Gene;gene=ygfT;gene_biotype=protein_coding;locus_tag=AC00_RS09015;old_locus_tag=AC00_3306 NZ_JJLU01000102.1 Protein Homology CDS 31469 33388 . - 0 ID=cds-WP_032288286.1;Parent=gene-AC00_RS09015;Dbxref=GenBank:WP_032288286.1;Name=WP_032288286.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=ygfT;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311786.2;locus_tag=AC00_RS09015;product=formate-dependent uric acid utilization protein YgfT;protein_id=WP_032288286.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 33824 35272 . + . ID=gene-AC00_RS09010;Name=uacT;gbkey=Gene;gene=uacT;gene_biotype=protein_coding;locus_tag=AC00_RS09010;old_locus_tag=AC00_3307 NZ_JJLU01000102.1 Protein Homology CDS 33824 35272 . + 0 ID=cds-WP_032281549.1;Parent=gene-AC00_RS09010;Dbxref=GenBank:WP_032281549.1;Name=WP_032281549.1;gbkey=CDS;gene=uacT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417364.2;locus_tag=AC00_RS09010;product=urate/proton symporter UacT;protein_id=WP_032281549.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 35274 35399 . + . ID=gene-AC00_RS09005;Name=yqfG;gbkey=Gene;gene=yqfG;gene_biotype=protein_coding;locus_tag=AC00_RS09005;old_locus_tag=AC00_3308 NZ_JJLU01000102.1 Protein Homology CDS 35274 35399 . + 0 ID=cds-WP_001488323.1;Parent=gene-AC00_RS09005;Dbxref=GenBank:WP_001488323.1;Name=WP_001488323.1;gbkey=CDS;gene=yqfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791254.1;locus_tag=AC00_RS09005;product=protein YqfG;protein_id=WP_001488323.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 35396 35467 . - . ID=gene-AC00_RS30485;Name=AC00_RS30485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30485 NZ_JJLU01000102.1 Protein Homology CDS 35396 35467 . - 0 ID=cds-WP_120795390.1;Parent=gene-AC00_RS30485;Dbxref=GenBank:WP_120795390.1;Name=WP_120795390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518812.1;locus_tag=AC00_RS30485;product=protein YqfH;protein_id=WP_120795390.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 35522 36070 . + . ID=gene-AC00_RS09000;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=AC00_RS09000;old_locus_tag=AC00_3309 NZ_JJLU01000102.1 Protein Homology CDS 35522 36070 . + 0 ID=cds-WP_001192818.1;Parent=gene-AC00_RS09000;Dbxref=GenBank:WP_001192818.1;Name=WP_001192818.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417365.1;locus_tag=AC00_RS09000;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001192818.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 36113 37630 . - . ID=gene-AC00_RS08995;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AC00_RS08995;old_locus_tag=AC00_3310 NZ_JJLU01000102.1 Protein Homology CDS 36113 37630 . - 0 ID=cds-WP_000003071.1;Parent=gene-AC00_RS08995;Dbxref=GenBank:WP_000003071.1;Name=WP_000003071.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AC00_RS08995;product=lysine--tRNA ligase;protein_id=WP_000003071.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 37640 38738 . - . ID=gene-AC00_RS08990;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AC00_RS08990;old_locus_tag=AC00_3311 NZ_JJLU01000102.1 Protein Homology CDS 38664 38738 . - 0 ID=cds-WP_099145329.1;Parent=gene-AC00_RS08990;Dbxref=GenBank:WP_099145329.1;Name=WP_099145329.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AC00_RS08990;product=peptide chain release factor 2;protein_id=WP_099145329.1;transl_table=11 NZ_JJLU01000102.1 Protein Homology CDS 37640 38662 . - 0 ID=cds-WP_099145329.1;Parent=gene-AC00_RS08990;Dbxref=GenBank:WP_099145329.1;Name=WP_099145329.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=AC00_RS08990;product=peptide chain release factor 2;protein_id=WP_099145329.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 38829 40562 . - . ID=gene-AC00_RS08985;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=AC00_RS08985;old_locus_tag=AC00_3312 NZ_JJLU01000102.1 Protein Homology CDS 38829 40562 . - 0 ID=cds-WP_032288287.1;Parent=gene-AC00_RS08985;Dbxref=GenBank:WP_032288287.1;Name=WP_032288287.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311791.1;locus_tag=AC00_RS08985;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_032288287.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 40568 41278 . - . ID=gene-AC00_RS08980;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=AC00_RS08980;old_locus_tag=AC00_3313 NZ_JJLU01000102.1 Protein Homology CDS 40568 41278 . - 0 ID=cds-WP_032281552.1;Parent=gene-AC00_RS08980;Dbxref=GenBank:WP_032281552.1;Name=WP_032281552.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311792.1;locus_tag=AC00_RS08980;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_032281552.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 41303 42199 . - . ID=gene-AC00_RS08975;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AC00_RS08975;old_locus_tag=AC00_3314 NZ_JJLU01000102.1 Protein Homology CDS 41303 42199 . - 0 ID=cds-WP_032281553.1;Parent=gene-AC00_RS08975;Dbxref=GenBank:WP_032281553.1;Name=WP_032281553.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=AC00_RS08975;product=site-specific tyrosine recombinase XerD;protein_id=WP_032281553.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 42311 42832 . + . ID=gene-AC00_RS08970;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=AC00_RS08970;old_locus_tag=AC00_3315 NZ_JJLU01000102.1 Protein Homology CDS 42311 42832 . + 0 ID=cds-WP_001055874.1;Parent=gene-AC00_RS08970;Dbxref=GenBank:WP_001055874.1;Name=WP_001055874.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311794.1;locus_tag=AC00_RS08970;product=flavodoxin FldB;protein_id=WP_001055874.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 42872 43279 . - . ID=gene-AC00_RS08965;Name=ygfX;gbkey=Gene;gene=ygfX;gene_biotype=protein_coding;locus_tag=AC00_RS08965;old_locus_tag=AC00_3316 NZ_JJLU01000102.1 Protein Homology CDS 42872 43279 . - 0 ID=cds-WP_000244777.1;Parent=gene-AC00_RS08965;Dbxref=GenBank:WP_000244777.1;Name=WP_000244777.1;gbkey=CDS;gene=ygfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417372.1;locus_tag=AC00_RS08965;product=protein YgfX;protein_id=WP_000244777.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 43260 43526 . - . ID=gene-AC00_RS08960;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=AC00_RS08960;old_locus_tag=AC00_3317 NZ_JJLU01000102.1 Protein Homology CDS 43260 43526 . - 0 ID=cds-WP_000354046.1;Parent=gene-AC00_RS08960;Dbxref=GenBank:WP_000354046.1;Name=WP_000354046.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=AC00_RS08960;product=FAD assembly factor SdhE;protein_id=WP_000354046.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 43769 44749 . + . ID=gene-AC00_RS08955;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AC00_RS08955;old_locus_tag=AC00_3318 NZ_JJLU01000102.1 Protein Homology CDS 43769 44749 . + 0 ID=cds-WP_032281554.1;Parent=gene-AC00_RS08955;Dbxref=GenBank:WP_032281554.1;Name=WP_032281554.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=AC00_RS08955;product=tRNA-modifying protein YgfZ;protein_id=WP_032281554.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 44826 45485 . - . ID=gene-AC00_RS08950;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=AC00_RS08950;old_locus_tag=AC00_3319 NZ_JJLU01000102.1 Protein Homology CDS 44826 45485 . - 0 ID=cds-WP_000250274.1;Parent=gene-AC00_RS08950;Dbxref=GenBank:WP_000250274.1;Name=WP_000250274.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311798.1;locus_tag=AC00_RS08950;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_000250274.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 45649 45960 . - . ID=gene-AC00_RS08945;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=AC00_RS08945;old_locus_tag=AC00_3320 NZ_JJLU01000102.1 Protein Homology CDS 45649 45960 . - 0 ID=cds-WP_001182957.1;Parent=gene-AC00_RS08945;Dbxref=GenBank:WP_001182957.1;Name=WP_001182957.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311799.1;locus_tag=AC00_RS08945;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_001182957.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 46005 47438 . + . ID=gene-AC00_RS08940;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=AC00_RS08940;old_locus_tag=AC00_3321 NZ_JJLU01000102.1 Protein Homology CDS 46005 47438 . + 0 ID=cds-WP_032281563.1;Parent=gene-AC00_RS08940;Dbxref=GenBank:WP_032281563.1;Name=WP_032281563.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311800.2;locus_tag=AC00_RS08940;product=6-phospho-beta-glucosidase BglA;protein_id=WP_032281563.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 47602 50475 . - . ID=gene-AC00_RS08935;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=AC00_RS08935;old_locus_tag=AC00_3322 NZ_JJLU01000102.1 Protein Homology CDS 47602 50475 . - 0 ID=cds-WP_032281555.1;Parent=gene-AC00_RS08935;Dbxref=GenBank:WP_032281555.1;Name=WP_032281555.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311801.1;locus_tag=AC00_RS08935;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_032281555.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 50594 50983 . - . ID=gene-AC00_RS08930;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AC00_RS08930;old_locus_tag=AC00_3323 NZ_JJLU01000102.1 Protein Homology CDS 50594 50983 . - 0 ID=cds-WP_001295377.1;Parent=gene-AC00_RS08930;Dbxref=GenBank:WP_001295377.1;Name=WP_001295377.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=AC00_RS08930;product=glycine cleavage system protein GcvH;protein_id=WP_001295377.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 51007 52101 . - . ID=gene-AC00_RS08925;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AC00_RS08925;old_locus_tag=AC00_3324 NZ_JJLU01000102.1 Protein Homology CDS 51007 52101 . - 0 ID=cds-WP_000068706.1;Parent=gene-AC00_RS08925;Dbxref=GenBank:WP_000068706.1;Name=WP_000068706.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417381.1;locus_tag=AC00_RS08925;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_000068706.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 52392 52475 . + . ID=gene-AC00_RS30490;Name=AC00_RS30490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30490;old_locus_tag=AC00_3325 NZ_JJLU01000102.1 Protein Homology CDS 52392 52475 . + 0 ID=cds-WP_122985416.1;Parent=gene-AC00_RS30490;Dbxref=GenBank:WP_122985416.1;Name=WP_122985416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518813.1;locus_tag=AC00_RS30490;product=hypothetical protein;protein_id=WP_122985416.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 52549 53751 . - . ID=gene-AC00_RS08920;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=AC00_RS08920;old_locus_tag=AC00_3326 NZ_JJLU01000102.1 Protein Homology CDS 52549 53751 . - 0 ID=cds-WP_032281556.1;Parent=gene-AC00_RS08920;Dbxref=GenBank:WP_032281556.1;Name=WP_032281556.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311804.1;locus_tag=AC00_RS08920;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_032281556.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 53774 54952 . - . ID=gene-AC00_RS08915;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=AC00_RS08915;old_locus_tag=AC00_3327 NZ_JJLU01000102.1 Protein Homology CDS 53774 54952 . - 0 ID=cds-WP_032281557.1;Parent=gene-AC00_RS08915;Dbxref=GenBank:WP_032281557.1;Name=WP_032281557.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311805.1;locus_tag=AC00_RS08915;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_032281557.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 54949 56274 . - . ID=gene-AC00_RS08910;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=AC00_RS08910;old_locus_tag=AC00_3328 NZ_JJLU01000102.1 Protein Homology CDS 54949 56274 . - 0 ID=cds-WP_001290104.1;Parent=gene-AC00_RS08910;Dbxref=GenBank:WP_001290104.1;Name=WP_001290104.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311806.1;locus_tag=AC00_RS08910;product=Xaa-Pro aminopeptidase;protein_id=WP_001290104.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 56300 56878 . - . ID=gene-AC00_RS08905;Name=ygfB;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=AC00_RS08905;old_locus_tag=AC00_3329 NZ_JJLU01000102.1 Protein Homology CDS 56300 56878 . - 0 ID=cds-WP_001295378.1;Parent=gene-AC00_RS08905;Dbxref=GenBank:WP_001295378.1;Name=WP_001295378.1;gbkey=CDS;gene=ygfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=AC00_RS08905;product=UPF0149 family protein YgfB;protein_id=WP_001295378.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 57046 57375 . + . ID=gene-AC00_RS08900;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=AC00_RS08900;old_locus_tag=AC00_3330 NZ_JJLU01000102.1 Protein Homology CDS 57046 57375 . + 0 ID=cds-WP_001276008.1;Parent=gene-AC00_RS08900;Dbxref=GenBank:WP_001276008.1;Name=WP_001276008.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311808.1;locus_tag=AC00_RS08900;product=cell division protein ZapA;protein_id=WP_001276008.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 57417 57600 . + . ID=gene-AC00_RS26785;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AC00_RS26785 NZ_JJLU01000102.1 cmsearch ncRNA 57417 57600 . + . ID=rna-AC00_RS26785;Parent=gene-AC00_RS26785;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26785;product=6S RNA NZ_JJLU01000102.1 cmsearch exon 57417 57600 . + . ID=exon-AC00_RS26785-1;Parent=rna-AC00_RS26785;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26785;product=6S RNA NZ_JJLU01000102.1 RefSeq gene 57621 58223 . + . ID=gene-AC00_RS08895;Name=fau;gbkey=Gene;gene=fau;gene_biotype=protein_coding;locus_tag=AC00_RS08895;old_locus_tag=AC00_3331 NZ_JJLU01000102.1 Protein Homology CDS 57621 58223 . + 0 ID=cds-WP_001547709.1;Parent=gene-AC00_RS08895;Dbxref=GenBank:WP_001547709.1;Name=WP_001547709.1;gbkey=CDS;gene=fau;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311809.4;locus_tag=AC00_RS08895;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001547709.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 58324 58383 . - . ID=gene-AC00_RS28120;Name=ibsC;gbkey=Gene;gene=ibsC;gene_biotype=protein_coding;locus_tag=AC00_RS28120 NZ_JJLU01000102.1 Protein Homology CDS 58324 58383 . - 0 ID=cds-WP_071525914.1;Parent=gene-AC00_RS28120;Dbxref=GenBank:WP_071525914.1;Name=WP_071525914.1;gbkey=CDS;gene=ibsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791255.1;locus_tag=AC00_RS28120;product=type I toxin-antitoxin system toxin IbsC;protein_id=WP_071525914.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 58612 59844 . - . ID=gene-AC00_RS08890;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AC00_RS08890;old_locus_tag=AC00_3332 NZ_JJLU01000102.1 Protein Homology CDS 58612 59844 . - 0 ID=cds-WP_001151604.1;Parent=gene-AC00_RS08890;Dbxref=GenBank:WP_001151604.1;Name=WP_001151604.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=AC00_RS08890;product=phosphoglycerate dehydrogenase;protein_id=WP_001151604.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 60100 60759 . - . ID=gene-AC00_RS08885;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AC00_RS08885;old_locus_tag=AC00_3334 NZ_JJLU01000102.1 Protein Homology CDS 60100 60759 . - 0 ID=cds-WP_032281564.1;Parent=gene-AC00_RS08885;Dbxref=GenBank:WP_032281564.1;Name=WP_032281564.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311812.1;locus_tag=AC00_RS08885;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_032281564.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 60815 61045 . - . ID=gene-AC00_RS08880;Name=AC00_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08880;old_locus_tag=AC00_3335 NZ_JJLU01000102.1 Protein Homology CDS 60815 61045 . - 0 ID=cds-WP_001307386.1;Parent=gene-AC00_RS08880;Dbxref=GenBank:WP_001307386.1;Name=WP_001307386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001328908.1;locus_tag=AC00_RS08880;product=hypothetical protein;protein_id=WP_001307386.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 61187 62080 . + . ID=gene-AC00_RS08875;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=AC00_RS08875;old_locus_tag=AC00_3336 NZ_JJLU01000102.1 Protein Homology CDS 61187 62080 . + 0 ID=cds-WP_000828351.1;Parent=gene-AC00_RS08875;Dbxref=GenBank:WP_000828351.1;Name=WP_000828351.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311813.1;locus_tag=AC00_RS08875;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_000828351.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 62284 64428 . + . ID=gene-AC00_RS08870;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=AC00_RS08870;old_locus_tag=AC00_3337 NZ_JJLU01000102.1 Protein Homology CDS 62284 64428 . + 0 ID=cds-WP_032281558.1;Parent=gene-AC00_RS08870;Dbxref=GenBank:WP_032281558.1;Name=WP_032281558.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417392.1;locus_tag=AC00_RS08870;product=methylmalonyl-CoA mutase;protein_id=WP_032281558.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 64421 65416 . + . ID=gene-AC00_RS08865;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=AC00_RS08865;old_locus_tag=AC00_3338 NZ_JJLU01000102.1 Protein Homology CDS 64421 65416 . + 0 ID=cds-WP_032288288.1;Parent=gene-AC00_RS08865;Dbxref=GenBank:WP_032288288.1;Name=WP_032288288.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=meaB;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417393.1;locus_tag=AC00_RS08865;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_032288288.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 65427 66212 . + . ID=gene-AC00_RS08860;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=AC00_RS08860;old_locus_tag=AC00_3339 NZ_JJLU01000102.1 Protein Homology CDS 65427 66212 . + 0 ID=cds-WP_000122063.1;Parent=gene-AC00_RS08860;Dbxref=GenBank:WP_000122063.1;Name=WP_000122063.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311816.2;locus_tag=AC00_RS08860;product=methylmalonyl-CoA decarboxylase;protein_id=WP_000122063.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 66236 67714 . + . ID=gene-AC00_RS08855;Name=scpC;gbkey=Gene;gene=scpC;gene_biotype=protein_coding;locus_tag=AC00_RS08855;old_locus_tag=AC00_3340 NZ_JJLU01000102.1 Protein Homology CDS 66236 67714 . + 0 ID=cds-WP_000449941.1;Parent=gene-AC00_RS08855;Dbxref=GenBank:WP_000449941.1;Name=WP_000449941.1;gbkey=CDS;gene=scpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311817.1;locus_tag=AC00_RS08855;product=propionyl-CoA:succinate CoA transferase;protein_id=WP_000449941.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 67711 68607 . - . ID=gene-AC00_RS08850;Name=srsR;gbkey=Gene;gene=srsR;gene_biotype=protein_coding;gene_synonym=ygfI;locus_tag=AC00_RS08850;old_locus_tag=AC00_3341 NZ_JJLU01000102.1 Protein Homology CDS 67711 68607 . - 0 ID=cds-WP_000350807.1;Parent=gene-AC00_RS08850;Dbxref=GenBank:WP_000350807.1;Name=WP_000350807.1;Ontology_term=GO:0003700;gbkey=CDS;gene=srsR;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417396.4;locus_tag=AC00_RS08850;product=LysR family transcriptional regulator SrsR;protein_id=WP_000350807.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 68776 69516 . - . ID=gene-AC00_RS08845;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=AC00_RS08845;old_locus_tag=AC00_3342 NZ_JJLU01000102.1 Protein Homology CDS 68776 69516 . - 0 ID=cds-WP_000669834.1;Parent=gene-AC00_RS08845;Dbxref=GenBank:WP_000669834.1;Name=WP_000669834.1;gbkey=CDS;gene=yggE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311820.1;locus_tag=AC00_RS08845;product=oxidative stress defense protein;protein_id=WP_000669834.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 69609 70244 . - . ID=gene-AC00_RS08840;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=AC00_RS08840;old_locus_tag=AC00_3343 NZ_JJLU01000102.1 Protein Homology CDS 69609 70244 . - 0 ID=cds-WP_000493346.1;Parent=gene-AC00_RS08840;Dbxref=GenBank:WP_000493346.1;Name=WP_000493346.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311821.1;locus_tag=AC00_RS08840;product=arginine exporter ArgO;protein_id=WP_000493346.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 70383 71243 . - . ID=gene-AC00_RS08835;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=AC00_RS08835;old_locus_tag=AC00_3344 NZ_JJLU01000102.1 Protein Homology CDS 70383 71243 . - 0 ID=cds-WP_000389818.1;Parent=gene-AC00_RS08835;Dbxref=GenBank:WP_000389818.1;Name=WP_000389818.1;gbkey=CDS;gene=mscS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311822.1;locus_tag=AC00_RS08835;product=small-conductance mechanosensitive channel MscS;protein_id=WP_000389818.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 71602 72681 . - . ID=gene-AC00_RS08830;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=AC00_RS08830;old_locus_tag=AC00_3345 NZ_JJLU01000102.1 Protein Homology CDS 71602 72681 . - 0 ID=cds-WP_000034372.1;Parent=gene-AC00_RS08830;Dbxref=GenBank:WP_000034372.1;Name=WP_000034372.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=AC00_RS08830;product=class II fructose-bisphosphate aldolase;protein_id=WP_000034372.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 72896 74059 . - . ID=gene-AC00_RS08825;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=AC00_RS08825;old_locus_tag=AC00_3346 NZ_JJLU01000102.1 Protein Homology CDS 72896 74059 . - 0 ID=cds-WP_000111269.1;Parent=gene-AC00_RS08825;Dbxref=GenBank:WP_000111269.1;Name=WP_000111269.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=AC00_RS08825;product=phosphoglycerate kinase;protein_id=WP_000111269.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 74109 75128 . - . ID=gene-AC00_RS08820;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=AC00_RS08820;old_locus_tag=AC00_3347 NZ_JJLU01000102.1 Protein Homology CDS 74109 75128 . - 0 ID=cds-WP_000218480.1;Parent=gene-AC00_RS08820;Dbxref=GenBank:WP_000218480.1;Name=WP_000218480.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=AC00_RS08820;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_000218480.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 75500 75931 . + . ID=gene-AC00_RS08815;Name=AC00_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08815;old_locus_tag=AC00_3348 NZ_JJLU01000102.1 Protein Homology CDS 75500 75931 . + 0 ID=cds-WP_000988700.1;Parent=gene-AC00_RS08815;Dbxref=GenBank:WP_000988700.1;Name=WP_000988700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311826.1;locus_tag=AC00_RS08815;product=PPC domain-containing DNA-binding protein;protein_id=WP_000988700.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 75954 76532 . + . ID=gene-AC00_RS08810;Name=AC00_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08810;old_locus_tag=AC00_3349 NZ_JJLU01000102.1 Protein Homology CDS 75954 76532 . + 0 ID=cds-WP_000124313.1;Parent=gene-AC00_RS08810;Dbxref=GenBank:WP_000124313.1;Name=WP_000124313.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311827.1;locus_tag=AC00_RS08810;product=ECF transporter S component;protein_id=WP_000124313.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 76533 77240 . + . ID=gene-AC00_RS08805;Name=AC00_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08805;old_locus_tag=AC00_3350 NZ_JJLU01000102.1 Protein Homology CDS 76533 77240 . + 0 ID=cds-WP_000553212.1;Parent=gene-AC00_RS08805;Dbxref=GenBank:WP_000553212.1;Name=WP_000553212.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311828.1;locus_tag=AC00_RS08805;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_000553212.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 77228 77905 . + . ID=gene-AC00_RS08800;Name=AC00_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08800;old_locus_tag=AC00_3351 NZ_JJLU01000102.1 Protein Homology CDS 77228 77905 . + 0 ID=cds-WP_032281565.1;Parent=gene-AC00_RS08800;Dbxref=GenBank:WP_032281565.1;Name=WP_032281565.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311829.1;locus_tag=AC00_RS08800;product=ABC transporter ATP-binding protein;protein_id=WP_032281565.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 77899 78576 . + . ID=gene-AC00_RS08795;Name=AC00_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08795;old_locus_tag=AC00_3352 NZ_JJLU01000102.1 Protein Homology CDS 77899 78576 . + 0 ID=cds-WP_032281560.1;Parent=gene-AC00_RS08795;Dbxref=GenBank:WP_032281560.1;Name=WP_032281560.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311830.1;locus_tag=AC00_RS08795;product=ABC transporter ATP-binding protein;protein_id=WP_032281560.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 78548 79261 . - . ID=gene-AC00_RS08790;Name=AC00_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08790;old_locus_tag=AC00_3353 NZ_JJLU01000102.1 Protein Homology CDS 78548 79261 . - 0 ID=cds-WP_032281561.1;Parent=gene-AC00_RS08790;Dbxref=GenBank:WP_032281561.1;Name=WP_032281561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708692.1;locus_tag=AC00_RS08790;product=nucleoside/nucleotide kinase family protein;protein_id=WP_032281561.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 79258 79767 . - . ID=gene-AC00_RS08785;Name=fumE;gbkey=Gene;gene=fumE;gene_biotype=protein_coding;locus_tag=AC00_RS08785;old_locus_tag=AC00_3354 NZ_JJLU01000102.1 Protein Homology CDS 79258 79767 . - 0 ID=cds-WP_032222435.1;Parent=gene-AC00_RS08785;Dbxref=GenBank:WP_032222435.1;Name=WP_032222435.1;gbkey=CDS;gene=fumE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311832.1;locus_tag=AC00_RS08785;product=fumarase E;protein_id=WP_032222435.1;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 79789 80754 . - . ID=gene-AC00_RS08780;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AC00_RS08780;old_locus_tag=AC00_3355 NZ_JJLU01000102.1 Protein Homology CDS 79789 80754 . - 0 ID=cds-WP_032281562.1;Parent=gene-AC00_RS08780;Dbxref=GenBank:WP_032281562.1;Name=WP_032281562.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417405.1;locus_tag=AC00_RS08780;product=class II fructose-bisphosphatase;protein_id=WP_032281562.1;transl_table=11 NZ_JJLU01000102.1 RefSeq pseudogene 80751 81563 . - . ID=gene-AC00_RS08775;Name=AC00_RS08775;end_range=81563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS08775;old_locus_tag=AC00_3356;partial=true;pseudo=true NZ_JJLU01000102.1 Protein Homology CDS 80751 81563 . - 0 ID=cds-AC00_RS08775;Parent=gene-AC00_RS08775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=81563,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026187.1;locus_tag=AC00_RS08775;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 NZ_JJLU01000102.1 RefSeq gene 81619 81887 . + . ID=gene-AC00_RS28135;Name=AC00_RS28135;end_range=81887,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28135;old_locus_tag=AC00_3357;partial=true NZ_JJLU01000102.1 Protein Homology CDS 81619 81887 . + 0 ID=cds-WP_001483704.1;Parent=gene-AC00_RS28135;Dbxref=GenBank:WP_001483704.1;Name=WP_001483704.1;end_range=81887,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28135;partial=true;product=IS1-like element transposase;protein_id=WP_001483704.1;transl_table=11 ##sequence-region NZ_JJLU01000103.1 1 8390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000103.1 RefSeq region 1 8390 . + . ID=NZ_JJLU01000103.1:1..8390;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000103.1 RefSeq pseudogene 1 315 . + . ID=gene-AC00_RS28140;Name=AC00_RS28140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28140;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000103.1 Protein Homology CDS 1 315 . + 0 ID=cds-AC00_RS28140;Parent=gene-AC00_RS28140;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28140;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000103.1 RefSeq pseudogene 331 804 . - . ID=gene-AC00_RS08770;Name=AC00_RS08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS08770;old_locus_tag=AC00_3358;partial=true;pseudo=true;start_range=.,331 NZ_JJLU01000103.1 Protein Homology CDS 331 804 . - 0 ID=cds-AC00_RS08770;Parent=gene-AC00_RS08770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311834.1;locus_tag=AC00_RS08770;partial=true;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;start_range=.,331;transl_table=11 NZ_JJLU01000103.1 RefSeq gene 819 2207 . - . ID=gene-AC00_RS08765;Name=cmtA;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=AC00_RS08765;old_locus_tag=AC00_3359 NZ_JJLU01000103.1 Protein Homology CDS 819 2207 . - 0 ID=cds-WP_000428805.1;Parent=gene-AC00_RS08765;Dbxref=GenBank:WP_000428805.1;Name=WP_000428805.1;gbkey=CDS;gene=cmtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311835.1;locus_tag=AC00_RS08765;product=PTS mannitol transporter subunit IICB;protein_id=WP_000428805.1;transl_table=11 NZ_JJLU01000103.1 RefSeq gene 2235 2678 . - . ID=gene-AC00_RS08760;Name=cmtB;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=AC00_RS08760;old_locus_tag=AC00_3360 NZ_JJLU01000103.1 Protein Homology CDS 2235 2678 . - 0 ID=cds-WP_032281567.1;Parent=gene-AC00_RS08760;Dbxref=GenBank:WP_032281567.1;Name=WP_032281567.1;gbkey=CDS;gene=cmtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311836.1;locus_tag=AC00_RS08760;product=PTS mannitol transporter subunit IIA;protein_id=WP_032281567.1;transl_table=11 NZ_JJLU01000103.1 RefSeq gene 3056 3964 . + . ID=gene-AC00_RS08755;Name=AC00_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08755;old_locus_tag=AC00_3362 NZ_JJLU01000103.1 Protein Homology CDS 3056 3964 . + 0 ID=cds-WP_032281568.1;Parent=gene-AC00_RS08755;Dbxref=GenBank:WP_032281568.1;Name=WP_032281568.1;Ontology_term=GO:0005743,GO:0016020,GO:0035632;gbkey=CDS;go_component=mitochondrial inner membrane|0005743||IEA,membrane|0016020||IEA,mitochondrial prohibitin complex|0035632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708698.1;locus_tag=AC00_RS08755;product=prohibitin family protein;protein_id=WP_032281568.1;transl_table=11 NZ_JJLU01000103.1 RefSeq gene 4184 6175 . - . ID=gene-AC00_RS08750;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AC00_RS08750;old_locus_tag=AC00_3363 NZ_JJLU01000103.1 Protein Homology CDS 4184 6175 . - 0 ID=cds-WP_032281569.1;Parent=gene-AC00_RS08750;Dbxref=GenBank:WP_032281569.1;Name=WP_032281569.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708699.2;locus_tag=AC00_RS08750;product=transketolase;protein_id=WP_032281569.1;transl_table=11 NZ_JJLU01000103.1 RefSeq gene 6453 7211 . + . ID=gene-AC00_RS08745;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AC00_RS08745;old_locus_tag=AC00_3364 NZ_JJLU01000103.1 Protein Homology CDS 6453 7211 . + 0 ID=cds-WP_000701842.1;Parent=gene-AC00_RS08745;Dbxref=GenBank:WP_000701842.1;Name=WP_000701842.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311838.2;locus_tag=AC00_RS08745;product=metalloprotease LoiP;protein_id=WP_000701842.1;transl_table=11 NZ_JJLU01000103.1 RefSeq gene 7530 8390 . - . ID=gene-AC00_RS08740;Name=speB;end_range=8390,.;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AC00_RS08740;old_locus_tag=AC00_3365;partial=true NZ_JJLU01000103.1 Protein Homology CDS 7530 8390 . - 0 ID=cds-WP_050438655.1;Parent=gene-AC00_RS08740;Dbxref=GenBank:WP_050438655.1;Name=WP_050438655.1;Ontology_term=GO:0008295,GO:0008783;end_range=8390,.;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AC00_RS08740;partial=true;product=agmatinase;protein_id=WP_050438655.1;transl_table=11 ##sequence-region NZ_JJLU01000104.1 1 37312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000104.1 RefSeq region 1 37312 . + . ID=NZ_JJLU01000104.1:1..37312;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000104.1 RefSeq gene 1 620 . + . ID=gene-AC00_RS08735;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;gene_synonym=yggG;locus_tag=AC00_RS08735;old_locus_tag=AC00_3366;partial=true;start_range=.,1 NZ_JJLU01000104.1 Protein Homology CDS 1 620 . + 2 ID=cds-WP_032288290.1;Parent=gene-AC00_RS08735;Dbxref=GenBank:WP_032288290.1;Name=WP_032288290.1;gbkey=CDS;gene=loiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311838.2;locus_tag=AC00_RS08735;partial=true;product=metalloprotease LoiP;protein_id=WP_032288290.1;start_range=.,1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 1165 2085 . - . ID=gene-AC00_RS08730;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=AC00_RS08730;old_locus_tag=AC00_3369 NZ_JJLU01000104.1 Protein Homology CDS 1165 2085 . - 0 ID=cds-WP_000105566.1;Parent=gene-AC00_RS08730;Dbxref=GenBank:WP_000105566.1;Name=WP_000105566.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311839.1;locus_tag=AC00_RS08730;product=agmatinase;protein_id=WP_000105566.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 2221 2952 . - . ID=gene-AC00_RS08725;Name=AC00_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08725;old_locus_tag=AC00_3370 NZ_JJLU01000104.1 Protein Homology CDS 2221 2952 . - 0 ID=cds-WP_000758914.1;Parent=gene-AC00_RS08725;Dbxref=GenBank:WP_000758914.1;Name=WP_000758914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311840.1;locus_tag=AC00_RS08725;product=lipoprotein;protein_id=WP_000758914.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 3098 5074 . - . ID=gene-AC00_RS08720;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=AC00_RS08720;old_locus_tag=AC00_3371 NZ_JJLU01000104.1 Protein Homology CDS 3098 5074 . - 0 ID=cds-WP_001295380.1;Parent=gene-AC00_RS08720;Dbxref=GenBank:WP_001295380.1;Name=WP_001295380.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311841.1;locus_tag=AC00_RS08720;product=biosynthetic arginine decarboxylase;protein_id=WP_001295380.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 5083 5214 . - . ID=gene-AC00_RS08715;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=AC00_RS08715;old_locus_tag=AC00_3372 NZ_JJLU01000104.1 Protein Homology CDS 5083 5214 . - 0 ID=cds-WP_001297406.1;Parent=gene-AC00_RS08715;Dbxref=GenBank:WP_001297406.1;Name=WP_001297406.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417414.2;locus_tag=AC00_RS08715;product=acid stress response protein YqgB;protein_id=WP_001297406.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 5308 5451 . - . ID=gene-AC00_RS31570;Name=yqgG;gbkey=Gene;gene=yqgG;gene_biotype=protein_coding;locus_tag=AC00_RS31570;old_locus_tag=AC00_3373 NZ_JJLU01000104.1 Protein Homology CDS 5308 5451 . - 0 ID=cds-WP_001297404.1;Parent=gene-AC00_RS31570;Dbxref=GenBank:WP_001297404.1;Name=WP_001297404.1;gbkey=CDS;gene=yqgG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051195.1;locus_tag=AC00_RS31570;product=protein YqgG;protein_id=WP_001297404.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 5562 5813 . - . ID=gene-AC00_RS31575;Name=yqgD;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=AC00_RS31575;old_locus_tag=AC00_3374 NZ_JJLU01000104.1 Protein Homology CDS 5562 5813 . - 0 ID=cds-WP_001303651.1;Parent=gene-AC00_RS31575;Dbxref=GenBank:WP_001303651.1;Name=WP_001303651.1;gbkey=CDS;gene=yqgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518814.1;locus_tag=AC00_RS31575;product=protein YqgD;protein_id=WP_001303651.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 5869 7023 . + . ID=gene-AC00_RS08710;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AC00_RS08710;old_locus_tag=AC00_3375 NZ_JJLU01000104.1 Protein Homology CDS 5869 7023 . + 0 ID=cds-WP_001062128.1;Parent=gene-AC00_RS08710;Dbxref=GenBank:WP_001062128.1;Name=WP_001062128.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=AC00_RS08710;product=methionine adenosyltransferase;protein_id=WP_001062128.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 7460 8854 . + . ID=gene-AC00_RS08705;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=AC00_RS08705;old_locus_tag=AC00_3376 NZ_JJLU01000104.1 Protein Homology CDS 7460 8854 . + 0 ID=cds-WP_001112301.1;Parent=gene-AC00_RS08705;Dbxref=GenBank:WP_001112301.1;Name=WP_001112301.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417418.1;locus_tag=AC00_RS08705;product=galactose/proton symporter;protein_id=WP_001112301.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 8931 9428 . + . ID=gene-AC00_RS08700;Name=yggI;gbkey=Gene;gene=yggI;gene_biotype=protein_coding;locus_tag=AC00_RS08700;old_locus_tag=AC00_3377 NZ_JJLU01000104.1 Protein Homology CDS 8931 9428 . + 0 ID=cds-WP_001300769.1;Parent=gene-AC00_RS08700;Dbxref=GenBank:WP_001300769.1;Name=WP_001300769.1;gbkey=CDS;gene=yggI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=AC00_RS08700;product=SprT family zinc-dependent metalloprotease;protein_id=WP_001300769.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 9523 10230 . + . ID=gene-AC00_RS08695;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=AC00_RS08695;old_locus_tag=AC00_3378 NZ_JJLU01000104.1 Protein Homology CDS 9523 10230 . + 0 ID=cds-WP_001613793.1;Parent=gene-AC00_RS08695;Dbxref=GenBank:WP_001613793.1;Name=WP_001613793.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417420.1;locus_tag=AC00_RS08695;product=deoxyribonuclease I;protein_id=WP_001613793.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 10310 11041 . + . ID=gene-AC00_RS08690;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=AC00_RS08690;old_locus_tag=AC00_3379 NZ_JJLU01000104.1 Protein Homology CDS 10310 11041 . + 0 ID=cds-WP_001222509.1;Parent=gene-AC00_RS08690;Dbxref=GenBank:WP_001222509.1;Name=WP_001222509.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=AC00_RS08690;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_001222509.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 11054 12004 . + . ID=gene-AC00_RS08685;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AC00_RS08685;old_locus_tag=AC00_3380 NZ_JJLU01000104.1 Protein Homology CDS 11054 12004 . + 0 ID=cds-WP_000593273.1;Parent=gene-AC00_RS08685;Dbxref=GenBank:WP_000593273.1;Name=WP_000593273.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417422.1;locus_tag=AC00_RS08685;product=glutathione synthase;protein_id=WP_000593273.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 12113 12676 . + . ID=gene-AC00_RS08680;Name=yqgE;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=AC00_RS08680;old_locus_tag=AC00_3381 NZ_JJLU01000104.1 Protein Homology CDS 12113 12676 . + 0 ID=cds-WP_001053178.1;Parent=gene-AC00_RS08680;Dbxref=GenBank:WP_001053178.1;Name=WP_001053178.1;gbkey=CDS;gene=yqgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417423.4;locus_tag=AC00_RS08680;product=YqgE/AlgH family protein;protein_id=WP_001053178.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 12676 13092 . + . ID=gene-AC00_RS08675;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AC00_RS08675;old_locus_tag=AC00_3382 NZ_JJLU01000104.1 Protein Homology CDS 12676 13092 . + 0 ID=cds-WP_000017103.1;Parent=gene-AC00_RS08675;Dbxref=GenBank:WP_000017103.1;Name=WP_000017103.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417424.1;locus_tag=AC00_RS08675;product=Holliday junction resolvase RuvX;protein_id=WP_000017103.1;transl_table=11 NZ_JJLU01000104.1 RefSeq pseudogene 13274 14253 . - . ID=gene-AC00_RS0125365;Name=yggR;gbkey=Gene;gene=yggR;gene_biotype=pseudogene;locus_tag=AC00_RS0125365;pseudo=true NZ_JJLU01000104.1 Protein Homology CDS 13274 14253 . - 0 ID=cds-AC00_RS0125365;Parent=gene-AC00_RS0125365;Note=frameshifted;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;gene=yggR;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311854.2;locus_tag=AC00_RS0125365;product=PilT/PilU family type 4a pilus ATPase;pseudo=true;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 14271 14975 . + . ID=gene-AC00_RS08670;Name=yggS;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=AC00_RS08670;old_locus_tag=AC00_3385 NZ_JJLU01000104.1 Protein Homology CDS 14271 14975 . + 0 ID=cds-WP_000997795.1;Parent=gene-AC00_RS08670;Dbxref=GenBank:WP_000997795.1;Name=WP_000997795.1;gbkey=CDS;gene=yggS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417426.1;locus_tag=AC00_RS08670;product=pyridoxal phosphate homeostasis protein;protein_id=WP_000997795.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 14993 15559 . + . ID=gene-AC00_RS08665;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=AC00_RS08665;old_locus_tag=AC00_3386 NZ_JJLU01000104.1 Protein Homology CDS 14993 15559 . + 0 ID=cds-WP_001094831.1;Parent=gene-AC00_RS08665;Dbxref=GenBank:WP_001094831.1;Name=WP_001094831.1;gbkey=CDS;gene=yggT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311855.1;locus_tag=AC00_RS08665;product=osmotic shock tolerance protein YggT;protein_id=WP_001094831.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 15556 15846 . + . ID=gene-AC00_RS08660;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=AC00_RS08660;old_locus_tag=AC00_3387 NZ_JJLU01000104.1 Protein Homology CDS 15556 15846 . + 0 ID=cds-WP_001277222.1;Parent=gene-AC00_RS08660;Dbxref=GenBank:WP_001277222.1;Name=WP_001277222.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417428.2;locus_tag=AC00_RS08660;product=DUF167 family protein YggU;protein_id=WP_001277222.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 15854 16447 . + . ID=gene-AC00_RS08655;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=AC00_RS08655;old_locus_tag=AC00_3388 NZ_JJLU01000104.1 Protein Homology CDS 15854 16447 . + 0 ID=cds-WP_001174747.1;Parent=gene-AC00_RS08655;Dbxref=GenBank:WP_001174747.1;Name=WP_001174747.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;gene=rdgB;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311857.1;locus_tag=AC00_RS08655;product=XTP/dITP diphosphatase;protein_id=WP_001174747.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 16440 17576 . + . ID=gene-AC00_RS08650;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=AC00_RS08650;old_locus_tag=AC00_3389 NZ_JJLU01000104.1 Protein Homology CDS 16440 17576 . + 0 ID=cds-WP_032281572.1;Parent=gene-AC00_RS08650;Dbxref=GenBank:WP_032281572.1;Name=WP_032281572.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708720.1;locus_tag=AC00_RS08650;product=radical SAM family heme chaperone HemW;protein_id=WP_032281572.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 17819 18826 . - . ID=gene-AC00_RS08645;Name=yggM;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=AC00_RS08645;old_locus_tag=AC00_3390 NZ_JJLU01000104.1 Protein Homology CDS 17819 18826 . - 0 ID=cds-WP_032281573.1;Parent=gene-AC00_RS08645;Dbxref=GenBank:WP_032281573.1;Name=WP_032281573.1;gbkey=CDS;gene=yggM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311859.1;locus_tag=AC00_RS08645;product=DUF1202 family protein;protein_id=WP_032281573.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 18943 19989 . - . ID=gene-AC00_RS08640;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=AC00_RS08640;old_locus_tag=AC00_3391 NZ_JJLU01000104.1 Protein Homology CDS 18943 19989 . - 0 ID=cds-WP_000394107.1;Parent=gene-AC00_RS08640;Dbxref=GenBank:WP_000394107.1;Name=WP_000394107.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311860.1;locus_tag=AC00_RS08640;product=L-asparaginase 2;protein_id=WP_000394107.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 20165 20884 . - . ID=gene-AC00_RS08635;Name=yggN;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=AC00_RS08635;old_locus_tag=AC00_3392 NZ_JJLU01000104.1 Protein Homology CDS 20165 20884 . - 0 ID=cds-WP_000984796.1;Parent=gene-AC00_RS08635;Dbxref=GenBank:WP_000984796.1;Name=WP_000984796.1;gbkey=CDS;gene=yggN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311861.1;locus_tag=AC00_RS08635;product=DUF2884 domain-containing protein;protein_id=WP_000984796.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 21068 21394 . - . ID=gene-AC00_RS08625;Name=yggL;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=AC00_RS08625;old_locus_tag=AC00_3394 NZ_JJLU01000104.1 Protein Homology CDS 21068 21394 . - 0 ID=cds-WP_001107564.1;Parent=gene-AC00_RS08625;Dbxref=GenBank:WP_001107564.1;Name=WP_001107564.1;gbkey=CDS;gene=yggL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=AC00_RS08625;product=YggL family protein;protein_id=WP_001107564.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 21394 22113 . - . ID=gene-AC00_RS08620;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=AC00_RS08620;old_locus_tag=AC00_3395 NZ_JJLU01000104.1 Protein Homology CDS 21394 22113 . - 0 ID=cds-WP_000786911.1;Parent=gene-AC00_RS08620;Dbxref=GenBank:WP_000786911.1;Name=WP_000786911.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417435.1;locus_tag=AC00_RS08620;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_000786911.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 22274 23326 . + . ID=gene-AC00_RS08615;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=AC00_RS08615;old_locus_tag=AC00_3396 NZ_JJLU01000104.1 Protein Homology CDS 22274 23326 . + 0 ID=cds-WP_001301529.1;Parent=gene-AC00_RS08615;Dbxref=GenBank:WP_001301529.1;Name=WP_001301529.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311864.1;locus_tag=AC00_RS08615;product=A/G-specific adenine glycosylase;protein_id=WP_001301529.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 23354 23629 . + . ID=gene-AC00_RS08610;Name=yggX;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=AC00_RS08610;old_locus_tag=AC00_3397 NZ_JJLU01000104.1 Protein Homology CDS 23354 23629 . + 0 ID=cds-WP_000091700.1;Parent=gene-AC00_RS08610;Dbxref=GenBank:WP_000091700.1;Name=WP_000091700.1;Ontology_term=GO:0005506;gbkey=CDS;gene=yggX;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311865.1;locus_tag=AC00_RS08610;product=oxidative damage protection protein;protein_id=WP_000091700.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 23694 24773 . + . ID=gene-AC00_RS08605;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AC00_RS08605;old_locus_tag=AC00_3398 NZ_JJLU01000104.1 Protein Homology CDS 23694 24773 . + 0 ID=cds-WP_032281575.1;Parent=gene-AC00_RS08605;Dbxref=GenBank:WP_032281575.1;Name=WP_032281575.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=AC00_RS08605;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_032281575.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 24975 26231 . + . ID=gene-AC00_RS08600;Name=nupG;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=AC00_RS08600;old_locus_tag=AC00_3400 NZ_JJLU01000104.1 Protein Homology CDS 24975 26231 . + 0 ID=cds-WP_001049791.1;Parent=gene-AC00_RS08600;Dbxref=GenBank:WP_001049791.1;Name=WP_001049791.1;gbkey=CDS;gene=nupG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311867.2;locus_tag=AC00_RS08600;product=nucleoside permease NupG;protein_id=WP_001049791.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 26281 28416 . - . ID=gene-AC00_RS08595;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=AC00_RS08595;old_locus_tag=AC00_3401 NZ_JJLU01000104.1 Protein Homology CDS 26281 28416 . - 0 ID=cds-WP_032281576.1;Parent=gene-AC00_RS08595;Dbxref=GenBank:WP_032281576.1;Name=WP_032281576.1;gbkey=CDS;gene=speC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311868.2;locus_tag=AC00_RS08595;product=ornithine decarboxylase;protein_id=WP_032281576.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 28579 28662 . - . ID=gene-AC00_RS31305;Name=AC00_RS31305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31305 NZ_JJLU01000104.1 Protein Homology CDS 28579 28662 . - 0 ID=cds-WP_212734937.1;Parent=gene-AC00_RS31305;Dbxref=GenBank:WP_212734937.1;Name=WP_212734937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051196.1;locus_tag=AC00_RS31305;product=hypothetical protein;protein_id=WP_212734937.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 28815 29522 . + . ID=gene-AC00_RS08590;Name=yqgA;gbkey=Gene;gene=yqgA;gene_biotype=protein_coding;locus_tag=AC00_RS08590;old_locus_tag=AC00_3402 NZ_JJLU01000104.1 Protein Homology CDS 28815 29522 . + 0 ID=cds-WP_000234483.1;Parent=gene-AC00_RS08590;Dbxref=GenBank:WP_000234483.1;Name=WP_000234483.1;gbkey=CDS;gene=yqgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311869.1;locus_tag=AC00_RS08590;product=DUF554 domain-containing protein;protein_id=WP_000234483.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 29628 29703 . + . ID=gene-AC00_RS08585;Name=AC00_RS08585;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS08585;old_locus_tag=AC00_3403 NZ_JJLU01000104.1 tRNAscan-SE tRNA 29628 29703 . + . ID=rna-AC00_RS08585;Parent=gene-AC00_RS08585;anticodon=(pos:29661..29663);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS08585;product=tRNA-Phe NZ_JJLU01000104.1 tRNAscan-SE exon 29628 29703 . + . ID=exon-AC00_RS08585-1;Parent=rna-AC00_RS08585;anticodon=(pos:29661..29663);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS08585;product=tRNA-Phe NZ_JJLU01000104.1 RefSeq pseudogene 30064 30684 . - . ID=gene-AC00_RS08580;Name=AC00_RS08580;end_range=30684,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS08580;old_locus_tag=AC00_3404;partial=true;pseudo=true NZ_JJLU01000104.1 Protein Homology CDS 30064 30684 . - 0 ID=cds-AC00_RS08580;Parent=gene-AC00_RS08580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011171972.1;locus_tag=AC00_RS08580;partial=true;product=Wadjet anti-phage system protein JetD domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000104.1 RefSeq pseudogene 30763 31041 . - . ID=gene-AC00_RS28165;Name=AC00_RS28165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28165;partial=true;pseudo=true;start_range=.,30763 NZ_JJLU01000104.1 Protein Homology CDS 30763 31041 . - 0 ID=cds-AC00_RS28165;Parent=gene-AC00_RS28165;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851537.1;locus_tag=AC00_RS28165;partial=true;product=DotU family type IV/VI secretion system protein;pseudo=true;start_range=.,30763;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 31038 32375 . - . ID=gene-AC00_RS08575;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=AC00_RS08575;old_locus_tag=AC00_3405 NZ_JJLU01000104.1 Protein Homology CDS 31038 32375 . - 0 ID=cds-WP_032281577.1;Parent=gene-AC00_RS08575;Dbxref=GenBank:WP_032281577.1;Name=WP_032281577.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227577.1;locus_tag=AC00_RS08575;product=type VI secretion system baseplate subunit TssK;protein_id=WP_032281577.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 32394 33941 . - . ID=gene-AC00_RS08570;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=AC00_RS08570;old_locus_tag=AC00_3406 NZ_JJLU01000104.1 Protein Homology CDS 32394 33941 . - 0 ID=cds-WP_032281578.1;Parent=gene-AC00_RS08570;Dbxref=GenBank:WP_032281578.1;Name=WP_032281578.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892320.1;locus_tag=AC00_RS08570;product=type VI secretion system contractile sheath large subunit;protein_id=WP_032281578.1;transl_table=11 NZ_JJLU01000104.1 RefSeq pseudogene 33974 34469 . - . ID=gene-AC00_RS0125370;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=pseudogene;locus_tag=AC00_RS0125370;pseudo=true NZ_JJLU01000104.1 Protein Homology CDS 33974 34469 . - 0 ID=cds-AC00_RS0125370;Parent=gene-AC00_RS0125370;Note=frameshifted;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892319.1;locus_tag=AC00_RS0125370;product=type VI secretion system contractile sheath small subunit;pseudo=true;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 35014 35523 . - . ID=gene-AC00_RS08565;Name=AC00_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08565;old_locus_tag=AC00_3408 NZ_JJLU01000104.1 Protein Homology CDS 35014 35523 . - 0 ID=cds-WP_032281579.1;Parent=gene-AC00_RS08565;Dbxref=GenBank:WP_032281579.1;Name=WP_032281579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090483.1;locus_tag=AC00_RS08565;product=hypothetical protein;protein_id=WP_032281579.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 35537 36427 . - . ID=gene-AC00_RS08560;Name=AC00_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08560;old_locus_tag=AC00_3409 NZ_JJLU01000104.1 GeneMarkS-2+ CDS 35537 36427 . - 0 ID=cds-WP_050438657.1;Parent=gene-AC00_RS08560;Dbxref=GenBank:WP_050438657.1;Name=WP_050438657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS08560;product=hypothetical protein;protein_id=WP_050438657.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 36431 37000 . - . ID=gene-AC00_RS08555;Name=AC00_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08555;old_locus_tag=AC00_3410 NZ_JJLU01000104.1 GeneMarkS-2+ CDS 36431 37000 . - 0 ID=cds-WP_050438658.1;Parent=gene-AC00_RS08555;Dbxref=GenBank:WP_050438658.1;Name=WP_050438658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS08555;product=hypothetical protein;protein_id=WP_050438658.1;transl_table=11 NZ_JJLU01000104.1 RefSeq gene 37066 37312 . + . ID=gene-AC00_RS0125375;Name=AC00_RS0125375;end_range=37312,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125375;old_locus_tag=AC00_3411;partial=true NZ_JJLU01000104.1 Protein Homology CDS 37066 37312 . + 0 ID=cds-WP_001473862.1-2;Parent=gene-AC00_RS0125375;Dbxref=GenBank:WP_001473862.1;Name=WP_001473862.1;end_range=37312,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0125375;partial=true;product=IS1-like element transposase;protein_id=WP_001473862.1;transl_table=11 ##sequence-region NZ_JJLU01000105.1 1 26858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000105.1 RefSeq region 1 26858 . + . ID=NZ_JJLU01000105.1:1..26858;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000105.1 RefSeq pseudogene 1 299 . + . ID=gene-AC00_RS08550;Name=AC00_RS08550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS08550;old_locus_tag=AC00_3412;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000105.1 Protein Homology CDS 1 299 . + 2 ID=cds-AC00_RS08550;Parent=gene-AC00_RS08550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS08550;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 502 1107 . - . ID=gene-AC00_RS08545;Name=AC00_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08545;old_locus_tag=AC00_3413 NZ_JJLU01000105.1 Protein Homology CDS 502 1107 . - 0 ID=cds-WP_032281583.1;Parent=gene-AC00_RS08545;Dbxref=GenBank:WP_032281583.1;Name=WP_032281583.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708783.1;locus_tag=AC00_RS08545;product=winged helix-turn-helix domain-containing protein;protein_id=WP_032281583.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 2491 4173 . - . ID=gene-AC00_RS08540;Name=glcA;gbkey=Gene;gene=glcA;gene_biotype=protein_coding;locus_tag=AC00_RS08540;old_locus_tag=AC00_3414 NZ_JJLU01000105.1 Protein Homology CDS 2491 4173 . - 0 ID=cds-WP_000259302.1;Parent=gene-AC00_RS08540;Dbxref=GenBank:WP_000259302.1;Name=WP_000259302.1;gbkey=CDS;gene=glcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417449.1;locus_tag=AC00_RS08540;product=glycolate permease GlcA;protein_id=WP_000259302.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 4528 6699 . - . ID=gene-AC00_RS08535;Name=glcB;gbkey=Gene;gene=glcB;gene_biotype=protein_coding;locus_tag=AC00_RS08535;old_locus_tag=AC00_3415 NZ_JJLU01000105.1 Protein Homology CDS 4528 6699 . - 0 ID=cds-WP_032281584.1;Parent=gene-AC00_RS08535;Dbxref=GenBank:WP_032281584.1;Name=WP_032281584.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=glcB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417450.1;locus_tag=AC00_RS08535;product=malate synthase G;protein_id=WP_032281584.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 6721 7125 . - . ID=gene-AC00_RS08530;Name=glcG;gbkey=Gene;gene=glcG;gene_biotype=protein_coding;locus_tag=AC00_RS08530;old_locus_tag=AC00_3416 NZ_JJLU01000105.1 Protein Homology CDS 6721 7125 . - 0 ID=cds-WP_000853256.1;Parent=gene-AC00_RS08530;Dbxref=GenBank:WP_000853256.1;Name=WP_000853256.1;gbkey=CDS;gene=glcG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417451.1;locus_tag=AC00_RS08530;product=GlcG family protein;protein_id=WP_000853256.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 7130 8353 . - . ID=gene-AC00_RS08525;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=AC00_RS08525;old_locus_tag=AC00_3417 NZ_JJLU01000105.1 Protein Homology CDS 7130 8353 . - 0 ID=cds-WP_032281585.1;Parent=gene-AC00_RS08525;Dbxref=GenBank:WP_032281585.1;Name=WP_032281585.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026190.1;locus_tag=AC00_RS08525;product=glycolate oxidase subunit GlcF;protein_id=WP_032281585.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 8364 9416 . - . ID=gene-AC00_RS08520;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=AC00_RS08520;old_locus_tag=AC00_3418 NZ_JJLU01000105.1 Protein Homology CDS 8364 9416 . - 0 ID=cds-WP_032281586.1;Parent=gene-AC00_RS08520;Dbxref=GenBank:WP_032281586.1;Name=WP_032281586.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439281.1;locus_tag=AC00_RS08520;product=glycolate oxidase subunit GlcE;protein_id=WP_032281586.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 9416 10915 . - . ID=gene-AC00_RS08515;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=AC00_RS08515;old_locus_tag=AC00_3419 NZ_JJLU01000105.1 Protein Homology CDS 9416 10915 . - 0 ID=cds-WP_032281587.1;Parent=gene-AC00_RS08515;Dbxref=GenBank:WP_032281587.1;Name=WP_032281587.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417453.1;locus_tag=AC00_RS08515;product=glycolate oxidase subunit GlcD;protein_id=WP_032281587.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 11166 11930 . + . ID=gene-AC00_RS08510;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=AC00_RS08510;old_locus_tag=AC00_3420 NZ_JJLU01000105.1 Protein Homology CDS 11166 11930 . + 0 ID=cds-WP_001308066.1;Parent=gene-AC00_RS08510;Dbxref=GenBank:WP_001308066.1;Name=WP_001308066.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417454.1;locus_tag=AC00_RS08510;product=transcriptional regulator GlcC;protein_id=WP_001308066.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 11937 13079 . - . ID=gene-AC00_RS08505;Name=yghO;gbkey=Gene;gene=yghO;gene_biotype=protein_coding;locus_tag=AC00_RS08505;old_locus_tag=AC00_3421 NZ_JJLU01000105.1 Protein Homology CDS 11937 13079 . - 0 ID=cds-WP_001702590.1;Parent=gene-AC00_RS08505;Dbxref=GenBank:WP_001702590.1;Name=WP_001702590.1;gbkey=CDS;gene=yghO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001327865.1;locus_tag=AC00_RS08505;product=protein YghO;protein_id=WP_001702590.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 13483 15171 . + . ID=gene-AC00_RS08500;Name=AC00_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08500;old_locus_tag=AC00_3422 NZ_JJLU01000105.1 Protein Homology CDS 13483 15171 . + 0 ID=cds-WP_032281588.1;Parent=gene-AC00_RS08500;Dbxref=GenBank:WP_032281588.1;Name=WP_032281588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001383581.1;locus_tag=AC00_RS08500;product=fatty acyl-AMP ligase;protein_id=WP_032281588.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 15168 16082 . + . ID=gene-AC00_RS08495;Name=AC00_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08495;old_locus_tag=AC00_3423 NZ_JJLU01000105.1 Protein Homology CDS 15168 16082 . + 0 ID=cds-WP_032281589.1;Parent=gene-AC00_RS08495;Dbxref=GenBank:WP_032281589.1;Name=WP_032281589.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001481799.1;locus_tag=AC00_RS08495;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_032281589.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 16114 16362 . + . ID=gene-AC00_RS08490;Name=AC00_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08490;old_locus_tag=AC00_3424 NZ_JJLU01000105.1 Protein Homology CDS 16114 16362 . + 0 ID=cds-WP_000248097.1;Parent=gene-AC00_RS08490;Dbxref=GenBank:WP_000248097.1;Name=WP_000248097.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708794.1;locus_tag=AC00_RS08490;product=acyl carrier protein;protein_id=WP_000248097.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 16362 17534 . + . ID=gene-AC00_RS08485;Name=spt;gbkey=Gene;gene=spt;gene_biotype=protein_coding;locus_tag=AC00_RS08485;old_locus_tag=AC00_3425 NZ_JJLU01000105.1 Protein Homology CDS 16362 17534 . + 0 ID=cds-WP_000524942.1;Parent=gene-AC00_RS08485;Dbxref=GenBank:WP_000524942.1;Name=WP_000524942.1;Ontology_term=GO:0046513,GO:0004758,GO:0030170;gbkey=CDS;gene=spt;go_function=serine C-palmitoyltransferase activity|0004758||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=ceramide biosynthetic process|0046513||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239167.1;locus_tag=AC00_RS08485;product=serine palmitoyltransferase;protein_id=WP_000524942.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 17569 18648 . - . ID=gene-AC00_RS08480;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AC00_RS08480;old_locus_tag=AC00_3426 NZ_JJLU01000105.1 Protein Homology CDS 17569 18648 . - 0 ID=cds-WP_032281590.1;Parent=gene-AC00_RS08480;Dbxref=GenBank:WP_032281590.1;Name=WP_032281590.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708797.1;locus_tag=AC00_RS08480;product=LPS export ABC transporter permease LptG;protein_id=WP_032281590.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 18645 19715 . - . ID=gene-AC00_RS08475;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AC00_RS08475;old_locus_tag=AC00_3427 NZ_JJLU01000105.1 Protein Homology CDS 18645 19715 . - 0 ID=cds-WP_000779648.1;Parent=gene-AC00_RS08475;Dbxref=GenBank:WP_000779648.1;Name=WP_000779648.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708798.1;locus_tag=AC00_RS08475;product=LPS export ABC transporter permease LptF;protein_id=WP_000779648.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 19746 20306 . - . ID=gene-AC00_RS08470;Name=AC00_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08470;old_locus_tag=AC00_3428 NZ_JJLU01000105.1 Protein Homology CDS 19746 20306 . - 0 ID=cds-WP_001298770.1;Parent=gene-AC00_RS08470;Dbxref=GenBank:WP_001298770.1;Name=WP_001298770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708799.2;locus_tag=AC00_RS08470;product=YtfJ family protein;protein_id=WP_001298770.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 20318 21142 . - . ID=gene-AC00_RS08465;Name=AC00_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08465;old_locus_tag=AC00_3429 NZ_JJLU01000105.1 Protein Homology CDS 20318 21142 . - 0 ID=cds-WP_000984951.1;Parent=gene-AC00_RS08465;Dbxref=GenBank:WP_000984951.1;Name=WP_000984951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708800.1;locus_tag=AC00_RS08465;product=hypothetical protein;protein_id=WP_000984951.1;transl_table=11 NZ_JJLU01000105.1 RefSeq pseudogene 21142 22491 . - . ID=gene-AC00_RS31065;Name=AC00_RS31065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31065;pseudo=true NZ_JJLU01000105.1 Protein Homology CDS 21142 22491 . - 0 ID=cds-AC00_RS31065;Parent=gene-AC00_RS31065;Note=internal stop;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708801.1;locus_tag=AC00_RS31065;product=lipopolysaccharide biosynthesis protein;pseudo=true;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 22537 23295 . - . ID=gene-AC00_RS08450;Name=AC00_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08450;old_locus_tag=AC00_3432 NZ_JJLU01000105.1 Protein Homology CDS 22537 23295 . - 0 ID=cds-WP_000339508.1;Parent=gene-AC00_RS08450;Dbxref=GenBank:WP_000339508.1;Name=WP_000339508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417458.1;locus_tag=AC00_RS08450;product=hypothetical protein;protein_id=WP_000339508.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 23327 24040 . - . ID=gene-AC00_RS08445;Name=yghS;gbkey=Gene;gene=yghS;gene_biotype=protein_coding;locus_tag=AC00_RS08445;old_locus_tag=AC00_3433 NZ_JJLU01000105.1 Protein Homology CDS 23327 24040 . - 0 ID=cds-WP_077757412.1;Parent=gene-AC00_RS08445;Dbxref=GenBank:WP_077757412.1;Name=WP_077757412.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghS;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708803.1;locus_tag=AC00_RS08445;product=dTMP kinase;protein_id=WP_077757412.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 24214 24906 . + . ID=gene-AC00_RS08440;Name=yghT;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;locus_tag=AC00_RS08440;old_locus_tag=AC00_3434 NZ_JJLU01000105.1 Protein Homology CDS 24214 24906 . + 0 ID=cds-WP_032281591.1;Parent=gene-AC00_RS08440;Dbxref=GenBank:WP_032281591.1;Name=WP_032281591.1;Ontology_term=GO:0006233,GO:0006235,GO:0016310,GO:0004798,GO:0005524;gbkey=CDS;gene=yghT;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA,dTTP biosynthetic process|0006235||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417460.1;locus_tag=AC00_RS08440;product=dTMP kinase;protein_id=WP_032281591.1;transl_table=11 NZ_JJLU01000105.1 RefSeq gene 24955 26454 . - . ID=gene-AC00_RS08435;Name=pitB;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=AC00_RS08435;old_locus_tag=AC00_3435 NZ_JJLU01000105.1 Protein Homology CDS 24955 26454 . - 0 ID=cds-WP_032281592.1;Parent=gene-AC00_RS08435;Dbxref=GenBank:WP_032281592.1;Name=WP_032281592.1;gbkey=CDS;gene=pitB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417461.1;locus_tag=AC00_RS08435;product=inorganic phosphate transporter PitB;protein_id=WP_032281592.1;transl_table=11 NZ_JJLU01000105.1 RefSeq pseudogene 26496 26858 . - . ID=gene-AC00_RS0125380;Name=AC00_RS0125380;end_range=26858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125380;old_locus_tag=AC00_3436;partial=true;pseudo=true NZ_JJLU01000105.1 Protein Homology CDS 26496 26858 . - 0 ID=cds-AC00_RS0125380;Parent=gene-AC00_RS0125380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=26858,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0125380;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000106.1 1 137220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000106.1 RefSeq region 1 137220 . + . ID=NZ_JJLU01000106.1:1..137220;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000106.1 RefSeq gene 1 227 . - . ID=gene-AC00_RS0125385;Name=AC00_RS0125385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125385;old_locus_tag=AC00_3437;partial=true;start_range=.,1 NZ_JJLU01000106.1 Protein Homology CDS 1 227 . - 0 ID=cds-WP_001396637.1-3;Parent=gene-AC00_RS0125385;Dbxref=GenBank:WP_001396637.1;Name=WP_001396637.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0125385;partial=true;product=IS1 family transposase;protein_id=WP_001396637.1;start_range=.,1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 557 2416 . - . ID=gene-AC00_RS08430;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=AC00_RS08430;old_locus_tag=AC00_3438 NZ_JJLU01000106.1 Protein Homology CDS 557 2416 . - 0 ID=cds-WP_001295514.1;Parent=gene-AC00_RS08430;Dbxref=GenBank:WP_001295514.1;Name=WP_001295514.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311900.1;locus_tag=AC00_RS08430;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_001295514.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 2621 3487 . + . ID=gene-AC00_RS08425;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=AC00_RS08425;old_locus_tag=AC00_3439 NZ_JJLU01000106.1 Protein Homology CDS 2621 3487 . + 0 ID=cds-WP_001295515.1;Parent=gene-AC00_RS08425;Dbxref=GenBank:WP_001295515.1;Name=WP_001295515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311901.2;locus_tag=AC00_RS08425;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_001295515.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 3610 3858 . - . ID=gene-AC00_RS08420;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=AC00_RS08420;old_locus_tag=AC00_3440 NZ_JJLU01000106.1 Protein Homology CDS 3610 3858 . - 0 ID=cds-WP_000334896.1;Parent=gene-AC00_RS08420;Dbxref=GenBank:WP_000334896.1;Name=WP_000334896.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311902.1;locus_tag=AC00_RS08420;product=hydrogenase maturation factor HybG;protein_id=WP_000334896.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 3871 4212 . - . ID=gene-AC00_RS08415;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=AC00_RS08415;old_locus_tag=AC00_3441 NZ_JJLU01000106.1 Protein Homology CDS 3871 4212 . - 0 ID=cds-WP_000544953.1;Parent=gene-AC00_RS08415;Dbxref=GenBank:WP_000544953.1;Name=WP_000544953.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417465.1;locus_tag=AC00_RS08415;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_000544953.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 4205 4693 . - . ID=gene-AC00_RS08410;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=AC00_RS08410;old_locus_tag=AC00_3442 NZ_JJLU01000106.1 Protein Homology CDS 4205 4693 . - 0 ID=cds-WP_000134014.1;Parent=gene-AC00_RS08410;Dbxref=GenBank:WP_000134014.1;Name=WP_000134014.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417466.1;locus_tag=AC00_RS08410;product=hydrogenase-2 assembly chaperone;protein_id=WP_000134014.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 4686 5180 . - . ID=gene-AC00_RS08405;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AC00_RS08405;old_locus_tag=AC00_3443 NZ_JJLU01000106.1 Protein Homology CDS 4686 5180 . - 0 ID=cds-WP_001221953.1;Parent=gene-AC00_RS08405;Dbxref=GenBank:WP_001221953.1;Name=WP_001221953.1;gbkey=CDS;gene=hybD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311905.1;locus_tag=AC00_RS08405;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_001221953.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 5180 6883 . - . ID=gene-AC00_RS08400;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=AC00_RS08400;old_locus_tag=AC00_3444 NZ_JJLU01000106.1 Protein Homology CDS 5180 6883 . - 0 ID=cds-WP_032281600.1;Parent=gene-AC00_RS08400;Dbxref=GenBank:WP_032281600.1;Name=WP_032281600.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311906.1;locus_tag=AC00_RS08400;product=hydrogenase 2 large subunit;protein_id=WP_032281600.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 6880 8058 . - . ID=gene-AC00_RS08395;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=AC00_RS08395;old_locus_tag=AC00_3445 NZ_JJLU01000106.1 Protein Homology CDS 6880 8058 . - 0 ID=cds-WP_000017703.1;Parent=gene-AC00_RS08395;Dbxref=GenBank:WP_000017703.1;Name=WP_000017703.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417469.1;locus_tag=AC00_RS08395;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_000017703.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 8048 9034 . - . ID=gene-AC00_RS08390;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=AC00_RS08390;old_locus_tag=AC00_3446 NZ_JJLU01000106.1 Protein Homology CDS 8048 9034 . - 0 ID=cds-WP_001081870.1;Parent=gene-AC00_RS08390;Dbxref=GenBank:WP_001081870.1;Name=WP_001081870.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311908.1;locus_tag=AC00_RS08390;product=hydrogenase 2 operon protein HybA;protein_id=WP_001081870.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 9037 10155 . - . ID=gene-AC00_RS08385;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=AC00_RS08385;old_locus_tag=AC00_3447 NZ_JJLU01000106.1 Protein Homology CDS 9037 10155 . - 0 ID=cds-WP_000145410.1;Parent=gene-AC00_RS08385;Dbxref=GenBank:WP_000145410.1;Name=WP_000145410.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311909.1;locus_tag=AC00_RS08385;product=hydrogenase 2 small subunit;protein_id=WP_000145410.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 10344 10631 . - . ID=gene-AC00_RS08380;Name=yghW;gbkey=Gene;gene=yghW;gene_biotype=protein_coding;locus_tag=AC00_RS08380;old_locus_tag=AC00_3448 NZ_JJLU01000106.1 Protein Homology CDS 10344 10631 . - 0 ID=cds-WP_001059136.1;Parent=gene-AC00_RS08380;Dbxref=GenBank:WP_001059136.1;Name=WP_001059136.1;gbkey=CDS;gene=yghW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311910.1;locus_tag=AC00_RS08380;product=DUF2623 family protein YghW;protein_id=WP_001059136.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 10750 11637 . - . ID=gene-AC00_RS08375;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=protein_coding;locus_tag=AC00_RS08375;old_locus_tag=AC00_3449 NZ_JJLU01000106.1 Protein Homology CDS 10750 11637 . - 0 ID=cds-WP_032281601.1;Parent=gene-AC00_RS08375;Dbxref=GenBank:WP_032281601.1;Name=WP_032281601.1;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=AC00_RS08375;product=YghX family hydrolase;protein_id=WP_032281601.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 11794 12834 . + . ID=gene-AC00_RS08370;Name=gpr;gbkey=Gene;gene=gpr;gene_biotype=protein_coding;locus_tag=AC00_RS08370;old_locus_tag=AC00_3450 NZ_JJLU01000106.1 Protein Homology CDS 11794 12834 . + 0 ID=cds-WP_000262144.1;Parent=gene-AC00_RS08370;Dbxref=GenBank:WP_000262144.1;Name=WP_000262144.1;gbkey=CDS;gene=gpr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708818.1;locus_tag=AC00_RS08370;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_000262144.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 12874 13368 . - . ID=gene-AC00_RS08365;Name=yqhA;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=AC00_RS08365;old_locus_tag=AC00_3451 NZ_JJLU01000106.1 Protein Homology CDS 12874 13368 . - 0 ID=cds-WP_000439331.1;Parent=gene-AC00_RS08365;Dbxref=GenBank:WP_000439331.1;Name=WP_000439331.1;gbkey=CDS;gene=yqhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311913.1;locus_tag=AC00_RS08365;product=TIGR00645 family protein;protein_id=WP_000439331.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 13559 14443 . + . ID=gene-AC00_RS08360;Name=yghA;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=AC00_RS08360;old_locus_tag=AC00_3452 NZ_JJLU01000106.1 Protein Homology CDS 13559 14443 . + 0 ID=cds-WP_000018758.1;Parent=gene-AC00_RS08360;Dbxref=GenBank:WP_000018758.1;Name=WP_000018758.1;gbkey=CDS;gene=yghA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311914.1;locus_tag=AC00_RS08360;product=NADP(+)-dependent aldehyde reductase;protein_id=WP_000018758.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 14715 15140 . - . ID=gene-AC00_RS08355;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=AC00_RS08355;old_locus_tag=AC00_3453 NZ_JJLU01000106.1 Protein Homology CDS 14715 15140 . - 0 ID=cds-WP_001240712.1;Parent=gene-AC00_RS08355;Dbxref=GenBank:WP_001240712.1;Name=WP_001240712.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311916.1;locus_tag=AC00_RS08355;product=TonB system transport protein ExbD;protein_id=WP_001240712.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 15147 15881 . - . ID=gene-AC00_RS08350;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=AC00_RS08350;old_locus_tag=AC00_3454 NZ_JJLU01000106.1 Protein Homology CDS 15147 15881 . - 0 ID=cds-WP_000527844.1;Parent=gene-AC00_RS08350;Dbxref=GenBank:WP_000527844.1;Name=WP_000527844.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311917.1;locus_tag=AC00_RS08350;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_000527844.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 16133 17320 . + . ID=gene-AC00_RS08345;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=AC00_RS08345;old_locus_tag=AC00_3455 NZ_JJLU01000106.1 Protein Homology CDS 16133 17320 . + 0 ID=cds-WP_032281602.1;Parent=gene-AC00_RS08345;Dbxref=GenBank:WP_032281602.1;Name=WP_032281602.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311919.1;locus_tag=AC00_RS08345;product=cystathionine beta-lyase;protein_id=WP_032281602.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 17460 18119 . + . ID=gene-AC00_RS08340;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=AC00_RS08340;old_locus_tag=AC00_3456 NZ_JJLU01000106.1 Protein Homology CDS 17460 18119 . + 0 ID=cds-WP_000268419.1;Parent=gene-AC00_RS08340;Dbxref=GenBank:WP_000268419.1;Name=WP_000268419.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311920.1;locus_tag=AC00_RS08340;product=DedA family general envelope maintenance protein YghB;protein_id=WP_000268419.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 18159 19058 . - . ID=gene-AC00_RS08335;Name=yqhC;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=AC00_RS08335;old_locus_tag=AC00_3457 NZ_JJLU01000106.1 Protein Homology CDS 18159 19058 . - 0 ID=cds-WP_001298382.1;Parent=gene-AC00_RS08335;Dbxref=GenBank:WP_001298382.1;Name=WP_001298382.1;gbkey=CDS;gene=yqhC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407451.1;locus_tag=AC00_RS08335;product=DNA-binding transcriptional regulator YqhC;protein_id=WP_001298382.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 19252 20415 . + . ID=gene-AC00_RS08325;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=AC00_RS08325;old_locus_tag=AC00_3459 NZ_JJLU01000106.1 Protein Homology CDS 19252 20415 . + 0 ID=cds-WP_001058802.1;Parent=gene-AC00_RS08325;Dbxref=GenBank:WP_001058802.1;Name=WP_001058802.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417484.1;locus_tag=AC00_RS08325;product=alcohol dehydrogenase;protein_id=WP_001058802.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 20520 21347 . + . ID=gene-AC00_RS08320;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=AC00_RS08320;old_locus_tag=AC00_3460 NZ_JJLU01000106.1 Protein Homology CDS 20520 21347 . + 0 ID=cds-WP_000013149.1;Parent=gene-AC00_RS08320;Dbxref=GenBank:WP_000013149.1;Name=WP_000013149.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417485.4;locus_tag=AC00_RS08320;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_000013149.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 21547 22473 . + . ID=gene-AC00_RS08315;Name=yqhG;gbkey=Gene;gene=yqhG;gene_biotype=protein_coding;locus_tag=AC00_RS08315;old_locus_tag=AC00_3462 NZ_JJLU01000106.1 Protein Homology CDS 21547 22473 . + 0 ID=cds-WP_032281603.1;Parent=gene-AC00_RS08315;Dbxref=GenBank:WP_032281603.1;Name=WP_032281603.1;gbkey=CDS;gene=yqhG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026195.1;locus_tag=AC00_RS08315;product=YbjP/YqhG family protein;protein_id=WP_032281603.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 22524 22781 . + . ID=gene-AC00_RS08310;Name=yqhH;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=AC00_RS08310;old_locus_tag=AC00_3463 NZ_JJLU01000106.1 Protein Homology CDS 22524 22781 . + 0 ID=cds-WP_032281604.1;Parent=gene-AC00_RS08310;Dbxref=GenBank:WP_032281604.1;Name=WP_032281604.1;gbkey=CDS;gene=yqhH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417487.1;locus_tag=AC00_RS08310;product=lipoprotein YqhH;protein_id=WP_032281604.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 22823 25042 . - . ID=gene-AC00_RS08305;Name=ygiQ;gbkey=Gene;gene=ygiQ;gene_biotype=protein_coding;locus_tag=AC00_RS08305;old_locus_tag=AC00_3464 NZ_JJLU01000106.1 Protein Homology CDS 22823 25042 . - 0 ID=cds-WP_032281605.1;Parent=gene-AC00_RS08305;Dbxref=GenBank:WP_032281605.1;Name=WP_032281605.1;Ontology_term=GO:1904047;gbkey=CDS;gene=ygiQ;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026196.1;locus_tag=AC00_RS08305;product=YgiQ family radical SAM protein;protein_id=WP_032281605.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 25153 26565 . - . ID=gene-AC00_RS08300;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=AC00_RS08300;old_locus_tag=AC00_3465 NZ_JJLU01000106.1 Protein Homology CDS 25153 26565 . - 0 ID=cds-WP_032281606.1;Parent=gene-AC00_RS08300;Dbxref=GenBank:WP_032281606.1;Name=WP_032281606.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311928.1;locus_tag=AC00_RS08300;product=cell division protein FtsP;protein_id=WP_032281606.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 26640 27377 . - . ID=gene-AC00_RS08295;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=AC00_RS08295;old_locus_tag=AC00_3466 NZ_JJLU01000106.1 Protein Homology CDS 26640 27377 . - 0 ID=cds-WP_000965712.1;Parent=gene-AC00_RS08295;Dbxref=GenBank:WP_000965712.1;Name=WP_000965712.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311929.1;locus_tag=AC00_RS08295;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_000965712.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 27611 29869 . - . ID=gene-AC00_RS08290;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AC00_RS08290;old_locus_tag=AC00_3467 NZ_JJLU01000106.1 Protein Homology CDS 27611 29869 . - 0 ID=cds-WP_001281881.1;Parent=gene-AC00_RS08290;Dbxref=GenBank:WP_001281881.1;Name=WP_001281881.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311930.1;locus_tag=AC00_RS08290;product=DNA topoisomerase IV subunit A;protein_id=WP_001281881.1;transl_table=11 NZ_JJLU01000106.1 RefSeq pseudogene 30007 31614 . - . ID=gene-AC00_RS0125400;Name=ygiS;gbkey=Gene;gene=ygiS;gene_biotype=pseudogene;locus_tag=AC00_RS0125400;pseudo=true NZ_JJLU01000106.1 Protein Homology CDS 30007 31614 . - 0 ID=cds-AC00_RS0125400;Parent=gene-AC00_RS0125400;Note=internal stop;gbkey=CDS;gene=ygiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417492.1;locus_tag=AC00_RS0125400;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000106.1 RefSeq pseudogene 31723 32205 . - . ID=gene-AC00_RS0125405;Name=ygiV;gbkey=Gene;gene=ygiV;gene_biotype=pseudogene;locus_tag=AC00_RS0125405;pseudo=true NZ_JJLU01000106.1 Protein Homology CDS 31723 32205 . - 0 ID=cds-AC00_RS0125405;Parent=gene-AC00_RS0125405;Note=internal stop;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;gene=ygiV;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708835.1;locus_tag=AC00_RS0125405;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 32258 32650 . - . ID=gene-AC00_RS08285;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=AC00_RS08285;old_locus_tag=AC00_3472 NZ_JJLU01000106.1 Protein Homology CDS 32258 32650 . - 0 ID=cds-WP_000712658.1;Parent=gene-AC00_RS08285;Dbxref=GenBank:WP_000712658.1;Name=WP_000712658.1;gbkey=CDS;gene=ygiW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311933.1;locus_tag=AC00_RS08285;product=OB fold stress tolerance protein YgiW;protein_id=WP_000712658.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 32802 33461 . + . ID=gene-AC00_RS08280;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AC00_RS08280;old_locus_tag=AC00_3473 NZ_JJLU01000106.1 Protein Homology CDS 32802 33461 . + 0 ID=cds-WP_021574775.1;Parent=gene-AC00_RS08280;Dbxref=GenBank:WP_021574775.1;Name=WP_021574775.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311934.1;locus_tag=AC00_RS08280;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_021574775.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 33458 34807 . + . ID=gene-AC00_RS08275;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=AC00_RS08275;old_locus_tag=AC00_3474 NZ_JJLU01000106.1 Protein Homology CDS 33458 34807 . + 0 ID=cds-WP_032281608.1;Parent=gene-AC00_RS08275;Dbxref=GenBank:WP_032281608.1;Name=WP_032281608.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417498.1;locus_tag=AC00_RS08275;product=quorum sensing histidine kinase QseC;protein_id=WP_032281608.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 34917 35498 . + . ID=gene-AC00_RS08270;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=AC00_RS08270;old_locus_tag=AC00_3475 NZ_JJLU01000106.1 Protein Homology CDS 34917 35498 . + 0 ID=cds-WP_000065430.1;Parent=gene-AC00_RS08270;Dbxref=GenBank:WP_000065430.1;Name=WP_000065430.1;gbkey=CDS;gene=mdaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311937.1;locus_tag=AC00_RS08270;product=NADPH:quinone oxidoreductase MdaB;protein_id=WP_000065430.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 35529 35843 . + . ID=gene-AC00_RS08265;Name=ygiN;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=AC00_RS08265;old_locus_tag=AC00_3476 NZ_JJLU01000106.1 Protein Homology CDS 35529 35843 . + 0 ID=cds-WP_000958598.1;Parent=gene-AC00_RS08265;Dbxref=GenBank:WP_000958598.1;Name=WP_000958598.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;gene=ygiN;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311938.1;locus_tag=AC00_RS08265;product=putative quinol monooxygenase;protein_id=WP_000958598.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 35888 36775 . - . ID=gene-AC00_RS08260;Name=AC00_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08260;old_locus_tag=AC00_3477 NZ_JJLU01000106.1 Protein Homology CDS 35888 36775 . - 0 ID=cds-WP_000614954.1;Parent=gene-AC00_RS08260;Dbxref=GenBank:WP_000614954.1;Name=WP_000614954.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311939.1;locus_tag=AC00_RS08260;product=MurR/RpiR family transcriptional regulator;protein_id=WP_000614954.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 36772 37719 . - . ID=gene-AC00_RS08255;Name=AC00_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08255;old_locus_tag=AC00_3478 NZ_JJLU01000106.1 Protein Homology CDS 36772 37719 . - 0 ID=cds-WP_032281609.1;Parent=gene-AC00_RS08255;Dbxref=GenBank:WP_032281609.1;Name=WP_032281609.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311940.1;locus_tag=AC00_RS08255;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_032281609.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 37730 38767 . - . ID=gene-AC00_RS08250;Name=AC00_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08250;old_locus_tag=AC00_3479 NZ_JJLU01000106.1 Protein Homology CDS 37730 38767 . - 0 ID=cds-WP_032281639.1;Parent=gene-AC00_RS08250;Dbxref=GenBank:WP_032281639.1;Name=WP_032281639.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311941.2;locus_tag=AC00_RS08250;product=FecCD family ABC transporter permease;protein_id=WP_032281639.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 38776 39759 . - . ID=gene-AC00_RS08245;Name=AC00_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08245;old_locus_tag=AC00_3480 NZ_JJLU01000106.1 Protein Homology CDS 38776 39759 . - 0 ID=cds-WP_000986441.1;Parent=gene-AC00_RS08245;Dbxref=GenBank:WP_000986441.1;Name=WP_000986441.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311942.1;locus_tag=AC00_RS08245;product=FecCD family ABC transporter permease;protein_id=WP_000986441.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 39756 40565 . - . ID=gene-AC00_RS08240;Name=AC00_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08240;old_locus_tag=AC00_3481 NZ_JJLU01000106.1 Protein Homology CDS 39756 40565 . - 0 ID=cds-WP_032222393.1;Parent=gene-AC00_RS08240;Dbxref=GenBank:WP_032222393.1;Name=WP_032222393.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311943.1;locus_tag=AC00_RS08240;product=ABC transporter ATP-binding protein;protein_id=WP_032222393.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 40939 43080 . + . ID=gene-AC00_RS08235;Name=AC00_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS08235;old_locus_tag=AC00_3482 NZ_JJLU01000106.1 Protein Homology CDS 40939 43080 . + 0 ID=cds-WP_032281610.1;Parent=gene-AC00_RS08235;Dbxref=GenBank:WP_032281610.1;Name=WP_032281610.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311944.1;locus_tag=AC00_RS08235;product=TonB-dependent siderophore receptor;protein_id=WP_032281610.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 43144 45036 . - . ID=gene-AC00_RS08230;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AC00_RS08230;old_locus_tag=AC00_3483 NZ_JJLU01000106.1 Protein Homology CDS 43144 45036 . - 0 ID=cds-WP_000195296.1;Parent=gene-AC00_RS08230;Dbxref=GenBank:WP_000195296.1;Name=WP_000195296.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417502.1;locus_tag=AC00_RS08230;product=DNA topoisomerase IV subunit B;protein_id=WP_000195296.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 45065 45646 . - . ID=gene-AC00_RS08225;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=AC00_RS08225;old_locus_tag=AC00_3484 NZ_JJLU01000106.1 Protein Homology CDS 45065 45646 . - 0 ID=cds-WP_000105733.1;Parent=gene-AC00_RS08225;Dbxref=GenBank:WP_000105733.1;Name=WP_000105733.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311946.1;locus_tag=AC00_RS08225;product=esterase YqiA;protein_id=WP_000105733.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 45646 46473 . - . ID=gene-AC00_RS08220;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=AC00_RS08220;old_locus_tag=AC00_3485 NZ_JJLU01000106.1 Protein Homology CDS 45646 46473 . - 0 ID=cds-WP_000444747.1;Parent=gene-AC00_RS08220;Dbxref=GenBank:WP_000444747.1;Name=WP_000444747.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311947.1;locus_tag=AC00_RS08220;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_000444747.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 46498 46920 . - . ID=gene-AC00_RS08215;Name=yqiB;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=AC00_RS08215;old_locus_tag=AC00_3486 NZ_JJLU01000106.1 Protein Homology CDS 46498 46920 . - 0 ID=cds-WP_000833393.1;Parent=gene-AC00_RS08215;Dbxref=GenBank:WP_000833393.1;Name=WP_000833393.1;gbkey=CDS;gene=yqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311948.1;locus_tag=AC00_RS08215;product=DUF1249 family protein;protein_id=WP_000833393.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 46921 47550 . - . ID=gene-AC00_RS08210;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AC00_RS08210;old_locus_tag=AC00_3487 NZ_JJLU01000106.1 Protein Homology CDS 46921 47550 . - 0 ID=cds-WP_032281611.1;Parent=gene-AC00_RS08210;Dbxref=GenBank:WP_032281611.1;Name=WP_032281611.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311949.1;locus_tag=AC00_RS08210;product=ADP-ribose diphosphatase;protein_id=WP_032281611.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 47755 49236 . + . ID=gene-AC00_RS08205;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=AC00_RS08205;old_locus_tag=AC00_3488 NZ_JJLU01000106.1 Protein Homology CDS 47755 49236 . + 0 ID=cds-WP_000735278.1;Parent=gene-AC00_RS08205;Dbxref=GenBank:WP_000735278.1;Name=WP_000735278.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417507.2;locus_tag=AC00_RS08205;product=outer membrane channel protein TolC;protein_id=WP_000735278.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 49384 50055 . + . ID=gene-AC00_RS08200;Name=ygiB;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=AC00_RS08200;old_locus_tag=AC00_3489 NZ_JJLU01000106.1 Protein Homology CDS 49384 50055 . + 0 ID=cds-WP_000831543.1;Parent=gene-AC00_RS08200;Dbxref=GenBank:WP_000831543.1;Name=WP_000831543.1;gbkey=CDS;gene=ygiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417509.3;locus_tag=AC00_RS08200;product=DUF1190 family protein;protein_id=WP_000831543.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 50061 51221 . + . ID=gene-AC00_RS08195;Name=ygiC;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=AC00_RS08195;old_locus_tag=AC00_3490 NZ_JJLU01000106.1 Protein Homology CDS 50061 51221 . + 0 ID=cds-WP_032281612.1;Parent=gene-AC00_RS08195;Dbxref=GenBank:WP_032281612.1;Name=WP_032281612.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=ygiC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=AC00_RS08195;product=glutathionylspermidine synthase family protein;protein_id=WP_032281612.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 51259 52047 . - . ID=gene-AC00_RS08190;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=AC00_RS08190;old_locus_tag=AC00_3491 NZ_JJLU01000106.1 Protein Homology CDS 51259 52047 . - 0 ID=cds-WP_032281613.1;Parent=gene-AC00_RS08190;Dbxref=GenBank:WP_032281613.1;Name=WP_032281613.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=AC00_RS08190;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_032281613.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 52190 52963 . + . ID=gene-AC00_RS08185;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=AC00_RS08185;old_locus_tag=AC00_3492 NZ_JJLU01000106.1 Protein Homology CDS 52190 52963 . + 0 ID=cds-WP_001295627.1;Parent=gene-AC00_RS08185;Dbxref=GenBank:WP_001295627.1;Name=WP_001295627.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=AC00_RS08185;product=zinc transporter ZupT;protein_id=WP_001295627.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 53021 53191 . - . ID=gene-AC00_RS30950;Name=yqiD;gbkey=Gene;gene=yqiD;gene_biotype=protein_coding;locus_tag=AC00_RS30950;old_locus_tag=AC00_3493 NZ_JJLU01000106.1 Protein Homology CDS 53021 53191 . - 0 ID=cds-WP_000469266.1;Parent=gene-AC00_RS30950;Dbxref=GenBank:WP_000469266.1;Name=WP_000469266.1;gbkey=CDS;gene=yqiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518818.1;locus_tag=AC00_RS30950;product=protein YqiD;protein_id=WP_000469266.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 53453 54106 . - . ID=gene-AC00_RS08175;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AC00_RS08175;old_locus_tag=AC00_3494 NZ_JJLU01000106.1 Protein Homology CDS 53453 54106 . - 0 ID=cds-WP_001076997.1;Parent=gene-AC00_RS08175;Dbxref=GenBank:WP_001076997.1;Name=WP_001076997.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311956.1;locus_tag=AC00_RS08175;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_001076997.1;transl_table=11 NZ_JJLU01000106.1 cmsearch riboswitch 54211 54359 . - . ID=id-NZ_JJLU01000106.1:54211..54359;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLU01000106.1 RefSeq gene 54481 54780 . + . ID=gene-AC00_RS08170;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=AC00_RS08170;old_locus_tag=AC00_3495 NZ_JJLU01000106.1 Protein Homology CDS 54481 54780 . + 0 ID=cds-WP_001298379.1;Parent=gene-AC00_RS08170;Dbxref=GenBank:WP_001298379.1;Name=WP_001298379.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311957.3;locus_tag=AC00_RS08170;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_001298379.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 54815 55015 . - . ID=gene-AC00_RS08165;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=AC00_RS08165;old_locus_tag=AC00_3496 NZ_JJLU01000106.1 Protein Homology CDS 54815 55015 . - 0 ID=cds-WP_001296424.1;Parent=gene-AC00_RS08165;Dbxref=GenBank:WP_001296424.1;Name=WP_001296424.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311958.1;locus_tag=AC00_RS08165;product=cell surface composition regulator GlgS;protein_id=WP_001296424.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 55284 55898 . + . ID=gene-AC00_RS08160;Name=yqiJ;gbkey=Gene;gene=yqiJ;gene_biotype=protein_coding;locus_tag=AC00_RS08160;old_locus_tag=AC00_3497 NZ_JJLU01000106.1 Protein Homology CDS 55284 55898 . + 0 ID=cds-WP_032281614.1;Parent=gene-AC00_RS08160;Dbxref=GenBank:WP_032281614.1;Name=WP_032281614.1;gbkey=CDS;gene=yqiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311959.1;locus_tag=AC00_RS08160;product=OB-fold-containig protein;protein_id=WP_032281614.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 55940 57601 . + . ID=gene-AC00_RS08155;Name=yqiK;gbkey=Gene;gene=yqiK;gene_biotype=protein_coding;locus_tag=AC00_RS08155;old_locus_tag=AC00_3498 NZ_JJLU01000106.1 Protein Homology CDS 55940 57601 . + 0 ID=cds-WP_032281615.1;Parent=gene-AC00_RS08155;Dbxref=GenBank:WP_032281615.1;Name=WP_032281615.1;Ontology_term=GO:0016020,GO:0016600;gbkey=CDS;gene=yqiK;go_component=membrane|0016020||IEA,flotillin complex|0016600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311960.1;locus_tag=AC00_RS08155;product=flotillin family protein;protein_id=WP_032281615.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 57840 57899 . + . ID=gene-AC00_RS30495;Name=AC00_RS30495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30495 NZ_JJLU01000106.1 Protein Homology CDS 57840 57899 . + 0 ID=cds-WP_001387081.1;Parent=gene-AC00_RS30495;Dbxref=GenBank:WP_001387081.1;Name=WP_001387081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791256.1;locus_tag=AC00_RS30495;product=type I toxin-antitoxin system Ibs family toxin;protein_id=WP_001387081.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 58215 58274 . + . ID=gene-AC00_RS28185;Name=ibsE;gbkey=Gene;gene=ibsE;gene_biotype=protein_coding;locus_tag=AC00_RS28185 NZ_JJLU01000106.1 Protein Homology CDS 58215 58274 . + 0 ID=cds-WP_010723221.1;Parent=gene-AC00_RS28185;Dbxref=GenBank:WP_010723221.1;Name=WP_010723221.1;gbkey=CDS;gene=ibsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791257.1;locus_tag=AC00_RS28185;product=type I toxin-antitoxin system toxin IbsE;protein_id=WP_010723221.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 58394 59827 . - . ID=gene-AC00_RS08150;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=AC00_RS08150;old_locus_tag=AC00_3499 NZ_JJLU01000106.1 Protein Homology CDS 58394 59827 . - 0 ID=cds-WP_000869178.1;Parent=gene-AC00_RS08150;Dbxref=GenBank:WP_000869178.1;Name=WP_000869178.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417524.1;locus_tag=AC00_RS08150;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_000869178.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 59875 62715 . - . ID=gene-AC00_RS08145;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=AC00_RS08145;old_locus_tag=AC00_3500 NZ_JJLU01000106.1 Protein Homology CDS 59875 62715 . - 0 ID=cds-WP_032281616.1;Parent=gene-AC00_RS08145;Dbxref=GenBank:WP_032281616.1;Name=WP_032281616.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417525.1;locus_tag=AC00_RS08145;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_032281616.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 62738 64039 . - . ID=gene-AC00_RS08140;Name=ygiF;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=AC00_RS08140;old_locus_tag=AC00_3501 NZ_JJLU01000106.1 Protein Homology CDS 62738 64039 . - 0 ID=cds-WP_000046255.1;Parent=gene-AC00_RS08140;Dbxref=GenBank:WP_000046255.1;Name=WP_000046255.1;gbkey=CDS;gene=ygiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311964.1;locus_tag=AC00_RS08140;product=inorganic triphosphatase;protein_id=WP_000046255.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 64281 64901 . + . ID=gene-AC00_RS08135;Name=ygiM;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=AC00_RS08135;old_locus_tag=AC00_3502 NZ_JJLU01000106.1 Protein Homology CDS 64281 64901 . + 0 ID=cds-WP_001125331.1;Parent=gene-AC00_RS08135;Dbxref=GenBank:WP_001125331.1;Name=WP_001125331.1;gbkey=CDS;gene=ygiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311965.1;locus_tag=AC00_RS08135;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001125331.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 64965 66203 . + . ID=gene-AC00_RS08130;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AC00_RS08130;old_locus_tag=AC00_3503 NZ_JJLU01000106.1 Protein Homology CDS 64965 66203 . + 0 ID=cds-WP_032281617.1;Parent=gene-AC00_RS08130;Dbxref=GenBank:WP_032281617.1;Name=WP_032281617.1;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311966.1;locus_tag=AC00_RS08130;product=fused tRNA nucleotidyltransferase/2'%2C3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca;protein_id=WP_032281617.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 66384 67205 . - . ID=gene-AC00_RS08125;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=AC00_RS08125;old_locus_tag=AC00_3504 NZ_JJLU01000106.1 Protein Homology CDS 66384 67205 . - 0 ID=cds-WP_032281618.1;Parent=gene-AC00_RS08125;Dbxref=GenBank:WP_032281618.1;Name=WP_032281618.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708867.2;locus_tag=AC00_RS08125;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_032281618.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 67296 67664 . - . ID=gene-AC00_RS08120;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AC00_RS08120;old_locus_tag=AC00_3505 NZ_JJLU01000106.1 Protein Homology CDS 67296 67664 . - 0 ID=cds-WP_001295541.1;Parent=gene-AC00_RS08120;Dbxref=GenBank:WP_001295541.1;Name=WP_001295541.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708868.2;locus_tag=AC00_RS08120;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_001295541.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 67769 68386 . + . ID=gene-AC00_RS08115;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AC00_RS08115;old_locus_tag=AC00_3506 NZ_JJLU01000106.1 Protein Homology CDS 67769 68386 . + 0 ID=cds-WP_001272796.1;Parent=gene-AC00_RS08115;Dbxref=GenBank:WP_001272796.1;Name=WP_001272796.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311969.1;locus_tag=AC00_RS08115;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001272796.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 68399 69331 . - . ID=gene-AC00_RS08110;Name=ttdR;gbkey=Gene;gene=ttdR;gene_biotype=protein_coding;locus_tag=AC00_RS08110;old_locus_tag=AC00_3507 NZ_JJLU01000106.1 Protein Homology CDS 68399 69331 . - 0 ID=cds-WP_000935209.1;Parent=gene-AC00_RS08110;Dbxref=GenBank:WP_000935209.1;Name=WP_000935209.1;Ontology_term=GO:0045893,GO:0003700,GO:0043565;gbkey=CDS;gene=ttdR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417532.1;locus_tag=AC00_RS08110;product=L-tartrate utilization transcriptional activator TtdR;protein_id=WP_000935209.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 69538 70449 . + . ID=gene-AC00_RS08105;Name=ttdA;gbkey=Gene;gene=ttdA;gene_biotype=protein_coding;locus_tag=AC00_RS08105;old_locus_tag=AC00_3509 NZ_JJLU01000106.1 Protein Homology CDS 69538 70449 . + 0 ID=cds-WP_001626007.1;Parent=gene-AC00_RS08105;Dbxref=GenBank:WP_001626007.1;Name=WP_001626007.1;Ontology_term=GO:0008730;gbkey=CDS;gene=ttdA;go_function=L(+)-tartrate dehydratase activity|0008730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311971.1;locus_tag=AC00_RS08105;product=L(+)-tartrate dehydratase subunit alpha;protein_id=WP_001626007.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 70446 71051 . + . ID=gene-AC00_RS08100;Name=ttdB;gbkey=Gene;gene=ttdB;gene_biotype=protein_coding;locus_tag=AC00_RS08100;old_locus_tag=AC00_3510 NZ_JJLU01000106.1 Protein Homology CDS 70446 71051 . + 0 ID=cds-WP_000722957.1;Parent=gene-AC00_RS08100;Dbxref=GenBank:WP_000722957.1;Name=WP_000722957.1;Ontology_term=GO:0016836;gbkey=CDS;gene=ttdB;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417534.1;locus_tag=AC00_RS08100;product=L(+)-tartrate dehydratase subunit beta;protein_id=WP_000722957.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 71099 72562 . + . ID=gene-AC00_RS08095;Name=ttdT;gbkey=Gene;gene=ttdT;gene_biotype=protein_coding;locus_tag=AC00_RS08095;old_locus_tag=AC00_3511 NZ_JJLU01000106.1 Protein Homology CDS 71099 72562 . + 0 ID=cds-WP_032288291.1;Parent=gene-AC00_RS08095;Dbxref=GenBank:WP_032288291.1;Name=WP_032288291.1;gbkey=CDS;gene=ttdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311973.1;locus_tag=AC00_RS08095;product=L-tartrate/succinate antiporter;protein_id=WP_032288291.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 72605 73618 . - . ID=gene-AC00_RS08090;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AC00_RS08090;old_locus_tag=AC00_3512 NZ_JJLU01000106.1 Protein Homology CDS 72605 73618 . - 0 ID=cds-WP_001264365.1;Parent=gene-AC00_RS08090;Dbxref=GenBank:WP_001264365.1;Name=WP_001264365.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=AC00_RS08090;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001264365.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 73856 74071 . + . ID=gene-AC00_RS08085;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AC00_RS08085;old_locus_tag=AC00_3513 NZ_JJLU01000106.1 Protein Homology CDS 73856 74071 . + 0 ID=cds-WP_001144069.1;Parent=gene-AC00_RS08085;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=AC00_RS08085;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 74182 75927 . + . ID=gene-AC00_RS08080;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AC00_RS08080;old_locus_tag=AC00_3514 NZ_JJLU01000106.1 Protein Homology CDS 74182 75927 . + 0 ID=cds-WP_032281620.1;Parent=gene-AC00_RS08080;Dbxref=GenBank:WP_032281620.1;Name=WP_032281620.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311976.1;locus_tag=AC00_RS08080;product=DNA primase;protein_id=WP_032281620.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 76122 77963 . + . ID=gene-AC00_RS08075;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AC00_RS08075;old_locus_tag=AC00_3516 NZ_JJLU01000106.1 Protein Homology CDS 76122 77963 . + 0 ID=cds-WP_001545429.1;Parent=gene-AC00_RS08075;Dbxref=GenBank:WP_001545429.1;Name=WP_001545429.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311977.1;locus_tag=AC00_RS08075;product=RNA polymerase sigma factor RpoD;protein_id=WP_001545429.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 78042 78548 . - . ID=gene-AC00_RS08070;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=AC00_RS08070;old_locus_tag=AC00_3517 NZ_JJLU01000106.1 Protein Homology CDS 78042 78548 . - 0 ID=cds-WP_032281621.1;Parent=gene-AC00_RS08070;Dbxref=GenBank:WP_032281621.1;Name=WP_032281621.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311978.1;locus_tag=AC00_RS08070;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_032281621.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 78673 78748 . + . ID=gene-AC00_RS08065;Name=AC00_RS08065;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS08065;old_locus_tag=AC00_3518 NZ_JJLU01000106.1 tRNAscan-SE tRNA 78673 78748 . + . ID=rna-AC00_RS08065;Parent=gene-AC00_RS08065;anticodon=(pos:78706..78708);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS08065;product=tRNA-Ile NZ_JJLU01000106.1 tRNAscan-SE exon 78673 78748 . + . ID=exon-AC00_RS08065-1;Parent=rna-AC00_RS08065;anticodon=(pos:78706..78708);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS08065;product=tRNA-Ile NZ_JJLU01000106.1 RefSeq gene 78802 79566 . - . ID=gene-AC00_RS08060;Name=nfeF;gbkey=Gene;gene=nfeF;gene_biotype=protein_coding;gene_synonym=yqjH;locus_tag=AC00_RS08060;old_locus_tag=AC00_3519 NZ_JJLU01000106.1 Protein Homology CDS 78802 79566 . - 0 ID=cds-WP_032281622.1;Parent=gene-AC00_RS08060;Dbxref=GenBank:WP_032281622.1;Name=WP_032281622.1;gbkey=CDS;gene=nfeF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311979.1;locus_tag=AC00_RS08060;product=NADPH-dependent ferric chelate reductase NfeF;protein_id=WP_032281622.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 79854 80477 . + . ID=gene-AC00_RS08055;Name=nfeR;gbkey=Gene;gene=nfeR;gene_biotype=protein_coding;gene_synonym=yqjI;locus_tag=AC00_RS08055;old_locus_tag=AC00_3520 NZ_JJLU01000106.1 Protein Homology CDS 79854 80477 . + 0 ID=cds-WP_000018005.1;Parent=gene-AC00_RS08055;Dbxref=GenBank:WP_000018005.1;Name=WP_000018005.1;gbkey=CDS;gene=nfeR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311980.1;locus_tag=AC00_RS08055;product=DNA-binding transcriptional regulator NfeR;protein_id=WP_000018005.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 80584 82104 . - . ID=gene-AC00_RS08050;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=AC00_RS08050;old_locus_tag=AC00_3521 NZ_JJLU01000106.1 Protein Homology CDS 80584 82104 . - 0 ID=cds-WP_032281623.1;Parent=gene-AC00_RS08050;Dbxref=GenBank:WP_032281623.1;Name=WP_032281623.1;gbkey=CDS;gene=aer;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311981.2;locus_tag=AC00_RS08050;product=aerotaxis sensor receptor Aer;protein_id=WP_032281623.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 82522 83901 . + . ID=gene-AC00_RS08045;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=AC00_RS08045;old_locus_tag=AC00_3523 NZ_JJLU01000106.1 Protein Homology CDS 82522 83901 . + 0 ID=cds-WP_001297164.1;Parent=gene-AC00_RS08045;Dbxref=GenBank:WP_001297164.1;Name=WP_001297164.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=AC00_RS08045;product=putrescine aminotransferase;protein_id=WP_001297164.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 83943 84275 . - . ID=gene-AC00_RS08040;Name=ygjH;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=AC00_RS08040;old_locus_tag=AC00_3524 NZ_JJLU01000106.1 Protein Homology CDS 83943 84275 . - 0 ID=cds-WP_000450588.1;Parent=gene-AC00_RS08040;Dbxref=GenBank:WP_000450588.1;Name=WP_000450588.1;gbkey=CDS;gene=ygjH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311983.1;locus_tag=AC00_RS08040;product=tRNA-binding protein;protein_id=WP_000450588.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 84494 85477 . + . ID=gene-AC00_RS08035;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=AC00_RS08035;old_locus_tag=AC00_3525 NZ_JJLU01000106.1 Protein Homology CDS 84494 85477 . + 0 ID=cds-WP_032281624.1;Parent=gene-AC00_RS08035;Dbxref=GenBank:WP_032281624.1;Name=WP_032281624.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311984.1;locus_tag=AC00_RS08035;product=transcriptional regulator EbgR;protein_id=WP_032281624.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 85661 88753 . + . ID=gene-AC00_RS08030;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=AC00_RS08030;old_locus_tag=AC00_3526 NZ_JJLU01000106.1 Protein Homology CDS 85661 88753 . + 0 ID=cds-WP_032281625.1;Parent=gene-AC00_RS08030;Dbxref=GenBank:WP_032281625.1;Name=WP_032281625.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026199.1;locus_tag=AC00_RS08030;product=beta-galactosidase subunit alpha;protein_id=WP_032281625.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 88750 89199 . + . ID=gene-AC00_RS08025;Name=ebgC;gbkey=Gene;gene=ebgC;gene_biotype=protein_coding;locus_tag=AC00_RS08025;old_locus_tag=AC00_3527 NZ_JJLU01000106.1 Protein Homology CDS 88750 89199 . + 0 ID=cds-WP_001219954.1;Parent=gene-AC00_RS08025;Dbxref=GenBank:WP_001219954.1;Name=WP_001219954.1;gbkey=CDS;gene=ebgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=AC00_RS08025;product=beta-galactosidase subunit beta;protein_id=WP_001219954.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 89262 90695 . + . ID=gene-AC00_RS08020;Name=ygjI;gbkey=Gene;gene=ygjI;gene_biotype=protein_coding;locus_tag=AC00_RS08020;old_locus_tag=AC00_3528 NZ_JJLU01000106.1 Protein Homology CDS 89262 90695 . + 0 ID=cds-WP_001285446.1;Parent=gene-AC00_RS08020;Dbxref=GenBank:WP_001285446.1;Name=WP_001285446.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ygjI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311987.1;locus_tag=AC00_RS08020;product=amino acid permease;protein_id=WP_001285446.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 90829 91899 . + . ID=gene-AC00_RS08015;Name=ygjJ;gbkey=Gene;gene=ygjJ;gene_biotype=protein_coding;locus_tag=AC00_RS08015;old_locus_tag=AC00_3529 NZ_JJLU01000106.1 Protein Homology CDS 90829 91899 . + 0 ID=cds-WP_032281626.1;Parent=gene-AC00_RS08015;Dbxref=GenBank:WP_032281626.1;Name=WP_032281626.1;gbkey=CDS;gene=ygjJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311988.1;locus_tag=AC00_RS08015;product=protein YgjJ;protein_id=WP_032281626.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 91916 94267 . + . ID=gene-AC00_RS08010;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=AC00_RS08010;old_locus_tag=AC00_3530 NZ_JJLU01000106.1 Protein Homology CDS 91916 94267 . + 0 ID=cds-WP_032281627.1;Parent=gene-AC00_RS08010;Dbxref=GenBank:WP_032281627.1;Name=WP_032281627.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311989.1;locus_tag=AC00_RS08010;product=alpha-glucosidase;protein_id=WP_032281627.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 94693 96711 . + . ID=gene-AC00_RS08005;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;locus_tag=AC00_RS08005;old_locus_tag=AC00_3531 NZ_JJLU01000106.1 Protein Homology CDS 94693 96711 . + 0 ID=cds-WP_032288293.1;Parent=gene-AC00_RS08005;Dbxref=GenBank:WP_032288293.1;Name=WP_032288293.1;gbkey=CDS;gene=fadH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311990.1;locus_tag=AC00_RS08005;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_032288293.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 96822 97958 . - . ID=gene-AC00_RS08000;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=AC00_RS08000;old_locus_tag=AC00_3532 NZ_JJLU01000106.1 Protein Homology CDS 96822 97958 . - 0 ID=cds-WP_024250066.1;Parent=gene-AC00_RS08000;Dbxref=GenBank:WP_024250066.1;Name=WP_024250066.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417555.4;locus_tag=AC00_RS08000;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_024250066.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 98043 98546 . + . ID=gene-AC00_RS07995;Name=ygjP;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=AC00_RS07995;old_locus_tag=AC00_3533 NZ_JJLU01000106.1 Protein Homology CDS 98043 98546 . + 0 ID=cds-WP_001295542.1;Parent=gene-AC00_RS07995;Dbxref=GenBank:WP_001295542.1;Name=WP_001295542.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;gene=ygjP;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311994.2;locus_tag=AC00_RS07995;product=M48 metallopeptidase family protein;protein_id=WP_001295542.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 98623 99315 . + . ID=gene-AC00_RS07990;Name=ygjQ;gbkey=Gene;gene=ygjQ;gene_biotype=protein_coding;locus_tag=AC00_RS07990;old_locus_tag=AC00_3534 NZ_JJLU01000106.1 Protein Homology CDS 98623 99315 . + 0 ID=cds-WP_032281630.1;Parent=gene-AC00_RS07990;Dbxref=GenBank:WP_032281630.1;Name=WP_032281630.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ygjQ;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708891.1;locus_tag=AC00_RS07990;product=SanA/YdcF family protein;protein_id=WP_032281630.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 99394 100380 . + . ID=gene-AC00_RS07985;Name=ygjR;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=AC00_RS07985;old_locus_tag=AC00_3535 NZ_JJLU01000106.1 Protein Homology CDS 99394 100380 . + 0 ID=cds-WP_032281640.1;Parent=gene-AC00_RS07985;Dbxref=GenBank:WP_032281640.1;Name=WP_032281640.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;gene=ygjR;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417558.2;locus_tag=AC00_RS07985;product=Gfo/Idh/MocA family protein;protein_id=WP_032281640.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 100663 101628 . + . ID=gene-AC00_RS07980;Name=alx;gbkey=Gene;gene=alx;gene_biotype=protein_coding;locus_tag=AC00_RS07980;old_locus_tag=AC00_3536 NZ_JJLU01000106.1 Protein Homology CDS 100663 101628 . + 0 ID=cds-WP_001098805.1;Parent=gene-AC00_RS07980;Dbxref=GenBank:WP_001098805.1;Name=WP_001098805.1;gbkey=CDS;gene=alx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098790.1;locus_tag=AC00_RS07980;product=TerC family membrane protein Alx;protein_id=WP_001098805.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 102184 103428 . + . ID=gene-AC00_RS07975;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=AC00_RS07975;old_locus_tag=AC00_3537 NZ_JJLU01000106.1 Protein Homology CDS 102184 103428 . + 0 ID=cds-WP_000211655.1;Parent=gene-AC00_RS07975;Dbxref=GenBank:WP_000211655.1;Name=WP_000211655.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311998.1;locus_tag=AC00_RS07975;product=serine/threonine transporter SstT;protein_id=WP_000211655.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 103433 103984 . - . ID=gene-AC00_RS07970;Name=ygjV;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=AC00_RS07970;old_locus_tag=AC00_3538 NZ_JJLU01000106.1 Protein Homology CDS 103433 103984 . - 0 ID=cds-WP_001455347.1;Parent=gene-AC00_RS07970;Dbxref=GenBank:WP_001455347.1;Name=WP_001455347.1;gbkey=CDS;gene=ygjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311999.1;locus_tag=AC00_RS07970;product=YgjV family protein;protein_id=WP_001455347.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 104067 105554 . - . ID=gene-AC00_RS07965;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=AC00_RS07965;old_locus_tag=AC00_3539 NZ_JJLU01000106.1 Protein Homology CDS 104067 105554 . - 0 ID=cds-WP_001199376.1;Parent=gene-AC00_RS07965;Dbxref=GenBank:WP_001199376.1;Name=WP_001199376.1;gbkey=CDS;gene=uxaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=AC00_RS07965;product=altronate dehydratase;protein_id=WP_001199376.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 105569 106981 . - . ID=gene-AC00_RS07960;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=AC00_RS07960;old_locus_tag=AC00_3540 NZ_JJLU01000106.1 Protein Homology CDS 105569 106981 . - 0 ID=cds-WP_000187442.1;Parent=gene-AC00_RS07960;Dbxref=GenBank:WP_000187442.1;Name=WP_000187442.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=AC00_RS07960;product=glucuronate isomerase;protein_id=WP_000187442.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 107464 108762 . + . ID=gene-AC00_RS07955;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=AC00_RS07955;old_locus_tag=AC00_3541 NZ_JJLU01000106.1 Protein Homology CDS 107464 108762 . + 0 ID=cds-WP_001226465.1;Parent=gene-AC00_RS07955;Dbxref=GenBank:WP_001226465.1;Name=WP_001226465.1;gbkey=CDS;gene=exuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708898.2;locus_tag=AC00_RS07955;product=hexuronate transporter ExuT;protein_id=WP_001226465.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 108892 109668 . + . ID=gene-AC00_RS07950;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=AC00_RS07950;old_locus_tag=AC00_3542 NZ_JJLU01000106.1 Protein Homology CDS 108892 109668 . + 0 ID=cds-WP_000406488.1;Parent=gene-AC00_RS07950;Dbxref=GenBank:WP_000406488.1;Name=WP_000406488.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708902.1;locus_tag=AC00_RS07950;product=transcriptional regulator ExuR;protein_id=WP_000406488.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 109908 109991 . + . ID=gene-AC00_RS31310;Name=yqiM;gbkey=Gene;gene=yqiM;gene_biotype=protein_coding;locus_tag=AC00_RS31310 NZ_JJLU01000106.1 Protein Homology CDS 109908 109991 . + 0 ID=cds-WP_211180508.1;Parent=gene-AC00_RS31310;Dbxref=GenBank:WP_211180508.1;Name=WP_211180508.1;gbkey=CDS;gene=yqiM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051200.1;locus_tag=AC00_RS31310;product=protein YqiM;protein_id=WP_211180508.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 110013 110675 . + . ID=gene-AC00_RS07945;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=AC00_RS07945;old_locus_tag=AC00_3545 NZ_JJLU01000106.1 Protein Homology CDS 110013 110675 . + 0 ID=cds-WP_000422149.1;Parent=gene-AC00_RS07945;Dbxref=GenBank:WP_000422149.1;Name=WP_000422149.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=AC00_RS07945;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_000422149.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 110679 111062 . + . ID=gene-AC00_RS07940;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=AC00_RS07940;old_locus_tag=AC00_3546 NZ_JJLU01000106.1 Protein Homology CDS 110679 111062 . + 0 ID=cds-WP_001166761.1;Parent=gene-AC00_RS07940;Dbxref=GenBank:WP_001166761.1;Name=WP_001166761.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312005.1;locus_tag=AC00_RS07940;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_001166761.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 111209 111577 . + . ID=gene-AC00_RS07935;Name=yqjC;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=AC00_RS07935;old_locus_tag=AC00_3547 NZ_JJLU01000106.1 Protein Homology CDS 111209 111577 . + 0 ID=cds-WP_032281631.1;Parent=gene-AC00_RS07935;Dbxref=GenBank:WP_032281631.1;Name=WP_032281631.1;gbkey=CDS;gene=yqjC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417568.2;locus_tag=AC00_RS07935;product=DUF1090 family protein YqjC;protein_id=WP_032281631.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 111615 111920 . + . ID=gene-AC00_RS07930;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=AC00_RS07930;old_locus_tag=AC00_3548 NZ_JJLU01000106.1 Protein Homology CDS 111615 111920 . + 0 ID=cds-WP_000031415.1;Parent=gene-AC00_RS07930;Dbxref=GenBank:WP_000031415.1;Name=WP_000031415.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;gene=yqjD;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=AC00_RS07930;product=DUF883 family protein;protein_id=WP_000031415.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 111923 112327 . + . ID=gene-AC00_RS07925;Name=yqjE;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=AC00_RS07925;old_locus_tag=AC00_3549 NZ_JJLU01000106.1 Protein Homology CDS 111923 112327 . + 0 ID=cds-WP_000785722.1;Parent=gene-AC00_RS07925;Dbxref=GenBank:WP_000785722.1;Name=WP_000785722.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yqjE;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312008.1;locus_tag=AC00_RS07925;product=phage holin family protein;protein_id=WP_000785722.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 112317 112616 . + . ID=gene-AC00_RS07920;Name=yqjK;gbkey=Gene;gene=yqjK;gene_biotype=protein_coding;locus_tag=AC00_RS07920;old_locus_tag=AC00_3550 NZ_JJLU01000106.1 Protein Homology CDS 112317 112616 . + 0 ID=cds-WP_000096086.1;Parent=gene-AC00_RS07920;Dbxref=GenBank:WP_000096086.1;Name=WP_000096086.1;gbkey=CDS;gene=yqjK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312009.1;locus_tag=AC00_RS07920;product=YqjK-like family protein;protein_id=WP_000096086.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 112802 113194 . + . ID=gene-AC00_RS07915;Name=yqjF;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=AC00_RS07915;old_locus_tag=AC00_3551 NZ_JJLU01000106.1 Protein Homology CDS 112802 113194 . + 0 ID=cds-WP_000732240.1;Parent=gene-AC00_RS07915;Dbxref=GenBank:WP_000732240.1;Name=WP_000732240.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yqjF;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=AC00_RS07915;product=DoxX family protein;protein_id=WP_000732240.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 113264 114250 . + . ID=gene-AC00_RS07910;Name=yqjG;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=AC00_RS07910;old_locus_tag=AC00_3552 NZ_JJLU01000106.1 Protein Homology CDS 113264 114250 . + 0 ID=cds-WP_032281632.1;Parent=gene-AC00_RS07910;Dbxref=GenBank:WP_032281632.1;Name=WP_032281632.1;gbkey=CDS;gene=yqjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708909.2;locus_tag=AC00_RS07910;product=glutathionyl-hydroquinone reductase YqjG;protein_id=WP_032281632.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 114543 114908 . + . ID=gene-AC00_RS07905;Name=yhaH;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=AC00_RS07905;old_locus_tag=AC00_3553 NZ_JJLU01000106.1 Protein Homology CDS 114543 114908 . + 0 ID=cds-WP_000384145.1;Parent=gene-AC00_RS07905;Dbxref=GenBank:WP_000384145.1;Name=WP_000384145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312012.1;locus_tag=AC00_RS07905;product=DUF805 domain-containing protein;protein_id=WP_000384145.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 115150 115506 . + . ID=gene-AC00_RS07900;Name=yhaI;gbkey=Gene;gene=yhaI;gene_biotype=protein_coding;locus_tag=AC00_RS07900;old_locus_tag=AC00_3554 NZ_JJLU01000106.1 Protein Homology CDS 115150 115506 . + 0 ID=cds-WP_001198807.1;Parent=gene-AC00_RS07900;Dbxref=GenBank:WP_001198807.1;Name=WP_001198807.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yhaI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312013.1;locus_tag=AC00_RS07900;product=DUF805 domain-containing protein;protein_id=WP_001198807.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 115557 116453 . - . ID=gene-AC00_RS07895;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=AC00_RS07895;old_locus_tag=AC00_3555 NZ_JJLU01000106.1 Protein Homology CDS 115557 116453 . - 0 ID=cds-WP_001041009.1;Parent=gene-AC00_RS07895;Dbxref=GenBank:WP_001041009.1;Name=WP_001041009.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312014.1;locus_tag=AC00_RS07895;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_001041009.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 116558 117259 . + . ID=gene-AC00_RS07890;Name=yhaK;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=AC00_RS07890;old_locus_tag=AC00_3556 NZ_JJLU01000106.1 Protein Homology CDS 116558 117259 . + 0 ID=cds-WP_000633576.1;Parent=gene-AC00_RS07890;Dbxref=GenBank:WP_000633576.1;Name=WP_000633576.1;gbkey=CDS;gene=yhaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=AC00_RS07890;product=pirin family protein;protein_id=WP_000633576.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 117282 117446 . + . ID=gene-AC00_RS07885;Name=yhaL;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=AC00_RS07885;old_locus_tag=AC00_3557 NZ_JJLU01000106.1 Protein Homology CDS 117282 117446 . + 0 ID=cds-WP_021577985.1;Parent=gene-AC00_RS07885;Dbxref=GenBank:WP_021577985.1;Name=WP_021577985.1;gbkey=CDS;gene=yhaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708913.2;locus_tag=AC00_RS07885;product=protein YhaL;protein_id=WP_021577985.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 117580 118890 . - . ID=gene-AC00_RS07880;Name=cyuA;gbkey=Gene;gene=cyuA;gene_biotype=protein_coding;locus_tag=AC00_RS07880;old_locus_tag=AC00_3558 NZ_JJLU01000106.1 Protein Homology CDS 117580 118890 . - 0 ID=cds-WP_000460514.1;Parent=gene-AC00_RS07880;Dbxref=GenBank:WP_000460514.1;Name=WP_000460514.1;gbkey=CDS;gene=cyuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312017.1;locus_tag=AC00_RS07880;product=cysteine desulfidase;protein_id=WP_000460514.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 118918 120249 . - . ID=gene-AC00_RS07875;Name=cyuP;gbkey=Gene;gene=cyuP;gene_biotype=protein_coding;locus_tag=AC00_RS07875;old_locus_tag=AC00_3559 NZ_JJLU01000106.1 Protein Homology CDS 118918 120249 . - 0 ID=cds-WP_032281633.1;Parent=gene-AC00_RS07875;Dbxref=GenBank:WP_032281633.1;Name=WP_032281633.1;gbkey=CDS;gene=cyuP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026203.3;locus_tag=AC00_RS07875;product=amino acid permease;protein_id=WP_032281633.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 120524 121888 . - . ID=gene-AC00_RS07870;Name=tdcG;gbkey=Gene;gene=tdcG;gene_biotype=protein_coding;locus_tag=AC00_RS07870;old_locus_tag=AC00_3560 NZ_JJLU01000106.1 Protein Homology CDS 120524 121888 . - 0 ID=cds-WP_032288294.1;Parent=gene-AC00_RS07870;Dbxref=GenBank:WP_032288294.1;Name=WP_032288294.1;gbkey=CDS;gene=tdcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026204.1;locus_tag=AC00_RS07870;product=L-serine ammonia-lyase;protein_id=WP_032288294.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 121960 122349 . - . ID=gene-AC00_RS07865;Name=tdcF;gbkey=Gene;gene=tdcF;gene_biotype=protein_coding;locus_tag=AC00_RS07865;old_locus_tag=AC00_3561 NZ_JJLU01000106.1 Protein Homology CDS 121960 122349 . - 0 ID=cds-WP_000719990.1;Parent=gene-AC00_RS07865;Dbxref=GenBank:WP_000719990.1;Name=WP_000719990.1;gbkey=CDS;gene=tdcF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312020.2;locus_tag=AC00_RS07865;product=enamine/imine deaminase;protein_id=WP_000719990.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 122363 124657 . - . ID=gene-AC00_RS07860;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=AC00_RS07860;old_locus_tag=AC00_3562 NZ_JJLU01000106.1 Protein Homology CDS 122363 124657 . - 0 ID=cds-WP_000861750.1;Parent=gene-AC00_RS07860;Dbxref=GenBank:WP_000861750.1;Name=WP_000861750.1;gbkey=CDS;gene=tdcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708918.1;locus_tag=AC00_RS07860;product=2-ketobutyrate formate-lyase/pyruvate formate-lyase;protein_id=WP_000861750.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 124691 125899 . - . ID=gene-AC00_RS07855;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=AC00_RS07855;old_locus_tag=AC00_3563 NZ_JJLU01000106.1 Protein Homology CDS 124691 125899 . - 0 ID=cds-WP_001397428.1;Parent=gene-AC00_RS07855;Dbxref=GenBank:WP_001397428.1;Name=WP_001397428.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708919.4;locus_tag=AC00_RS07855;product=propionate kinase;protein_id=WP_001397428.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 125925 127256 . - . ID=gene-AC00_RS07850;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=AC00_RS07850;old_locus_tag=AC00_3564 NZ_JJLU01000106.1 Protein Homology CDS 125925 127256 . - 0 ID=cds-WP_000107723.1;Parent=gene-AC00_RS07850;Dbxref=GenBank:WP_000107723.1;Name=WP_000107723.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312023.1;locus_tag=AC00_RS07850;product=threonine/serine transporter TdcC;protein_id=WP_000107723.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 127278 128267 . - . ID=gene-AC00_RS07845;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=AC00_RS07845;old_locus_tag=AC00_3565 NZ_JJLU01000106.1 Protein Homology CDS 127278 128267 . - 0 ID=cds-WP_000548347.1;Parent=gene-AC00_RS07845;Dbxref=GenBank:WP_000548347.1;Name=WP_000548347.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=AC00_RS07845;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_000548347.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 128366 129304 . - . ID=gene-AC00_RS07840;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=AC00_RS07840;old_locus_tag=AC00_3566 NZ_JJLU01000106.1 Protein Homology CDS 128366 129304 . - 0 ID=cds-WP_001555067.1;Parent=gene-AC00_RS07840;Dbxref=GenBank:WP_001555067.1;Name=WP_001555067.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312025.1;locus_tag=AC00_RS07840;product=transcriptional regulator TdcA;protein_id=WP_001555067.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 129619 129837 . + . ID=gene-AC00_RS31070;Name=tdcR;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=AC00_RS31070 NZ_JJLU01000106.1 Protein Homology CDS 129619 129837 . + 0 ID=cds-WP_212593034.1;Parent=gene-AC00_RS31070;Dbxref=GenBank:WP_212593034.1;Name=WP_212593034.1;gbkey=CDS;gene=tdcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417589.4;locus_tag=AC00_RS31070;product=transcriptional activator TdcR;protein_id=WP_212593034.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 130093 130632 . + . ID=gene-AC00_RS07830;Name=yhaB;gbkey=Gene;gene=yhaB;gene_biotype=protein_coding;locus_tag=AC00_RS07830;old_locus_tag=AC00_3569 NZ_JJLU01000106.1 Protein Homology CDS 130093 130632 . + 0 ID=cds-WP_000675739.1;Parent=gene-AC00_RS07830;Dbxref=GenBank:WP_000675739.1;Name=WP_000675739.1;gbkey=CDS;gene=yhaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312027.2;locus_tag=AC00_RS07830;product=protein YhaB;protein_id=WP_000675739.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 130654 131841 . + . ID=gene-AC00_RS07825;Name=AC00_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07825;old_locus_tag=AC00_3570 NZ_JJLU01000106.1 Protein Homology CDS 130654 131841 . + 0 ID=cds-WP_032281637.1;Parent=gene-AC00_RS07825;Dbxref=GenBank:WP_032281637.1;Name=WP_032281637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417591.1;locus_tag=AC00_RS07825;product=YhaC family protein;protein_id=WP_032281637.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 132225 132601 . - . ID=gene-AC00_RS26645;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AC00_RS26645 NZ_JJLU01000106.1 cmsearch RNase_P_RNA 132225 132601 . - . ID=rna-AC00_RS26645;Parent=gene-AC00_RS26645;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26645;product=RNase P RNA component class A NZ_JJLU01000106.1 cmsearch exon 132225 132601 . - . ID=exon-AC00_RS26645-1;Parent=rna-AC00_RS26645;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26645;product=RNase P RNA component class A NZ_JJLU01000106.1 RefSeq gene 132634 133779 . - . ID=gene-AC00_RS07820;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=AC00_RS07820;old_locus_tag=AC00_3571 NZ_JJLU01000106.1 Protein Homology CDS 132634 133779 . - 0 ID=cds-WP_032281638.1;Parent=gene-AC00_RS07820;Dbxref=GenBank:WP_032281638.1;Name=WP_032281638.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312029.2;locus_tag=AC00_RS07820;product=glycerate 2-kinase;protein_id=WP_032281638.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 133876 134766 . - . ID=gene-AC00_RS07815;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=AC00_RS07815;old_locus_tag=AC00_3572 NZ_JJLU01000106.1 Protein Homology CDS 133876 134766 . - 0 ID=cds-WP_001303675.1;Parent=gene-AC00_RS07815;Dbxref=GenBank:WP_001303675.1;Name=WP_001303675.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=AC00_RS07815;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_001303675.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 134796 135566 . - . ID=gene-AC00_RS07810;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=AC00_RS07810;old_locus_tag=AC00_3573 NZ_JJLU01000106.1 Protein Homology CDS 134796 135566 . - 0 ID=cds-WP_024250085.1;Parent=gene-AC00_RS07810;Dbxref=GenBank:WP_024250085.1;Name=WP_024250085.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312031.1;locus_tag=AC00_RS07810;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_024250085.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 135582 136916 . - . ID=gene-AC00_RS07805;Name=garP;gbkey=Gene;gene=garP;gene_biotype=protein_coding;locus_tag=AC00_RS07805;old_locus_tag=AC00_3574 NZ_JJLU01000106.1 Protein Homology CDS 135582 136916 . - 0 ID=cds-WP_000599636.1;Parent=gene-AC00_RS07805;Dbxref=GenBank:WP_000599636.1;Name=WP_000599636.1;gbkey=CDS;gene=garP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312032.1;locus_tag=AC00_RS07805;product=galactarate/glucarate/glycerate transporter GarP;protein_id=WP_000599636.1;transl_table=11 NZ_JJLU01000106.1 RefSeq gene 137003 137220 . + . ID=gene-AC00_RS28235;Name=AC00_RS28235;end_range=137220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28235;old_locus_tag=AC00_3575;partial=true NZ_JJLU01000106.1 Protein Homology CDS 137003 137220 . + 0 ID=cds-WP_001395569.1-3;Parent=gene-AC00_RS28235;Dbxref=GenBank:WP_001395569.1;Name=WP_001395569.1;Ontology_term=GO:0006313;end_range=137220,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28235;partial=true;product=IS1 family transposase;protein_id=WP_001395569.1;transl_table=11 ##sequence-region NZ_JJLU01000107.1 1 139517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000107.1 RefSeq region 1 139517 . + . ID=NZ_JJLU01000107.1:1..139517;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000107.1 RefSeq gene 1 269 . + . ID=gene-AC00_RS07800;Name=AC00_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07800;old_locus_tag=AC00_3576;partial=true;start_range=.,1 NZ_JJLU01000107.1 Protein Homology CDS 1 269 . + 2 ID=cds-WP_000212398.1-2;Parent=gene-AC00_RS07800;Dbxref=GenBank:WP_000212398.1;Name=WP_000212398.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS07800;partial=true;product=IS1 family transposase;protein_id=WP_000212398.1;start_range=.,1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 636 2207 . + . ID=gene-AC00_RS07795;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=AC00_RS07795;old_locus_tag=AC00_3578 NZ_JJLU01000107.1 Protein Homology CDS 636 2207 . + 0 ID=cds-WP_032281643.1;Parent=gene-AC00_RS07795;Dbxref=GenBank:WP_032281643.1;Name=WP_032281643.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312033.1;locus_tag=AC00_RS07795;product=galactarate dehydratase;protein_id=WP_032281643.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 2356 2691 . + . ID=gene-AC00_RS07790;Name=prlF;gbkey=Gene;gene=prlF;gene_biotype=protein_coding;locus_tag=AC00_RS07790;old_locus_tag=AC00_3579 NZ_JJLU01000107.1 Protein Homology CDS 2356 2691 . + 0 ID=cds-WP_001307405.1;Parent=gene-AC00_RS07790;Dbxref=GenBank:WP_001307405.1;Name=WP_001307405.1;gbkey=CDS;gene=prlF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417598.1;locus_tag=AC00_RS07790;product=type II toxin-antitoxin system antitoxin PrlF;protein_id=WP_001307405.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 2691 3155 . + . ID=gene-AC00_RS07785;Name=yhaV;gbkey=Gene;gene=yhaV;gene_biotype=protein_coding;locus_tag=AC00_RS07785;old_locus_tag=AC00_3580 NZ_JJLU01000107.1 Protein Homology CDS 2691 3155 . + 0 ID=cds-WP_000347273.1;Parent=gene-AC00_RS07785;Dbxref=GenBank:WP_000347273.1;Name=WP_000347273.1;gbkey=CDS;gene=yhaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312035.1;locus_tag=AC00_RS07785;product=type II toxin-antitoxin system ribonuclease toxin YhaV;protein_id=WP_000347273.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 3210 4019 . - . ID=gene-AC00_RS07780;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=AC00_RS07780;old_locus_tag=AC00_3581 NZ_JJLU01000107.1 Protein Homology CDS 3210 4019 . - 0 ID=cds-WP_000072187.1;Parent=gene-AC00_RS07780;Dbxref=GenBank:WP_000072187.1;Name=WP_000072187.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312036.1;locus_tag=AC00_RS07780;product=aga operon transcriptional regulator AgaR;protein_id=WP_000072187.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 4268 5548 . + . ID=gene-AC00_RS07775;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=AC00_RS07775;old_locus_tag=AC00_3582 NZ_JJLU01000107.1 Protein Homology CDS 4268 5548 . + 0 ID=cds-WP_000681944.1;Parent=gene-AC00_RS07775;Dbxref=GenBank:WP_000681944.1;Name=WP_000681944.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417601.1;locus_tag=AC00_RS07775;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_000681944.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 5571 6044 . + . ID=gene-AC00_RS07770;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=AC00_RS07770;old_locus_tag=AC00_3583 NZ_JJLU01000107.1 Protein Homology CDS 5571 6044 . + 0 ID=cds-WP_001295547.1;Parent=gene-AC00_RS07770;Dbxref=GenBank:WP_001295547.1;Name=WP_001295547.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312038.2;locus_tag=AC00_RS07770;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_001295547.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 6055 6834 . + . ID=gene-AC00_RS07765;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=AC00_RS07765;old_locus_tag=AC00_3584 NZ_JJLU01000107.1 Protein Homology CDS 6055 6834 . + 0 ID=cds-WP_032281644.1;Parent=gene-AC00_RS07765;Dbxref=GenBank:WP_032281644.1;Name=WP_032281644.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=AC00_RS07765;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_032281644.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 6824 7702 . + . ID=gene-AC00_RS07760;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=AC00_RS07760;old_locus_tag=AC00_3585 NZ_JJLU01000107.1 Protein Homology CDS 6824 7702 . + 0 ID=cds-WP_001295548.1;Parent=gene-AC00_RS07760;Dbxref=GenBank:WP_001295548.1;Name=WP_001295548.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=AC00_RS07760;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_001295548.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 7720 8154 . + . ID=gene-AC00_RS07755;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=AC00_RS07755;old_locus_tag=AC00_3586 NZ_JJLU01000107.1 Protein Homology CDS 7720 8154 . + 0 ID=cds-WP_000948824.1;Parent=gene-AC00_RS07755;Dbxref=GenBank:WP_000948824.1;Name=WP_000948824.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=AC00_RS07755;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_000948824.1;transl_table=11 NZ_JJLU01000107.1 RefSeq pseudogene 8151 9284 . + . ID=gene-AC00_RS30955;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=pseudogene;locus_tag=AC00_RS30955;pseudo=true NZ_JJLU01000107.1 Protein Homology CDS 8151 9284 . + 0 ID=cds-AC00_RS30955;Parent=gene-AC00_RS30955;Note=internal stop;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312042.2;locus_tag=AC00_RS30955;product=N-acetylglucosamine-6-phosphate deacetylase;pseudo=true;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 9635 10789 . + . ID=gene-AC00_RS07750;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=AC00_RS07750;old_locus_tag=AC00_3590 NZ_JJLU01000107.1 Protein Homology CDS 9635 10789 . + 0 ID=cds-WP_001114869.1;Parent=gene-AC00_RS07750;Dbxref=GenBank:WP_001114869.1;Name=WP_001114869.1;gbkey=CDS;gene=agaS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417605.1;locus_tag=AC00_RS07750;product=AgaS family sugar isomerase;protein_id=WP_001114869.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 10802 11662 . + . ID=gene-AC00_RS07745;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=AC00_RS07745;old_locus_tag=AC00_3591 NZ_JJLU01000107.1 Protein Homology CDS 10802 11662 . + 0 ID=cds-WP_032281645.1;Parent=gene-AC00_RS07745;Dbxref=GenBank:WP_032281645.1;Name=WP_032281645.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312044.1;locus_tag=AC00_RS07745;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_032281645.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 11829 12305 . + . ID=gene-AC00_RS07740;Name=agaB;gbkey=Gene;gene=agaB;gene_biotype=protein_coding;locus_tag=AC00_RS07740;old_locus_tag=AC00_3592 NZ_JJLU01000107.1 Protein Homology CDS 11829 12305 . + 0 ID=cds-WP_000098025.1;Parent=gene-AC00_RS07740;Dbxref=GenBank:WP_000098025.1;Name=WP_000098025.1;gbkey=CDS;gene=agaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312045.1;locus_tag=AC00_RS07740;product=PTS galactosamine transporter subunit IIB;protein_id=WP_000098025.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 12344 13147 . + . ID=gene-AC00_RS07735;Name=agaC;gbkey=Gene;gene=agaC;gene_biotype=protein_coding;locus_tag=AC00_RS07735;old_locus_tag=AC00_3593 NZ_JJLU01000107.1 Protein Homology CDS 12344 13147 . + 0 ID=cds-WP_000544489.1;Parent=gene-AC00_RS07735;Dbxref=GenBank:WP_000544489.1;Name=WP_000544489.1;gbkey=CDS;gene=agaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417608.1;locus_tag=AC00_RS07735;product=PTS galactosamine transporter subunit IIC;protein_id=WP_000544489.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 13137 13928 . + . ID=gene-AC00_RS07730;Name=agaD;gbkey=Gene;gene=agaD;gene_biotype=protein_coding;locus_tag=AC00_RS07730;old_locus_tag=AC00_3594 NZ_JJLU01000107.1 Protein Homology CDS 13137 13928 . + 0 ID=cds-WP_032261002.1;Parent=gene-AC00_RS07730;Dbxref=GenBank:WP_032261002.1;Name=WP_032261002.1;gbkey=CDS;gene=agaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708938.2;locus_tag=AC00_RS07730;product=PTS galactosamine transporter subunit IID;protein_id=WP_032261002.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 13929 14696 . + . ID=gene-AC00_RS07725;Name=agaI;gbkey=Gene;gene=agaI;gene_biotype=protein_coding;locus_tag=AC00_RS07725;old_locus_tag=AC00_3595 NZ_JJLU01000107.1 Protein Homology CDS 13929 14696 . + 0 ID=cds-WP_001377079.1;Parent=gene-AC00_RS07725;Dbxref=GenBank:WP_001377079.1;Name=WP_001377079.1;gbkey=CDS;gene=agaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019843039.1;locus_tag=AC00_RS07725;product=galactosamine-6-phosphate isomerase;protein_id=WP_001377079.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 14733 15179 . + . ID=gene-AC00_RS0125455;Name=AC00_RS0125455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125455 NZ_JJLU01000107.1 Protein Homology CDS 14733 15179 . + 0 ID=cds-WP_223719239.1;Parent=gene-AC00_RS0125455;Dbxref=GenBank:WP_223719239.1;Name=WP_223719239.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214818.1;locus_tag=AC00_RS0125455;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_223719239.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 15203 15505 . + . ID=gene-AC00_RS07720;Name=AC00_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07720;old_locus_tag=AC00_3596 NZ_JJLU01000107.1 Protein Homology CDS 15203 15505 . + 0 ID=cds-WP_032281646.1;Parent=gene-AC00_RS07720;Dbxref=GenBank:WP_032281646.1;Name=WP_032281646.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209263.1;locus_tag=AC00_RS07720;product=helix-turn-helix domain-containing protein;protein_id=WP_032281646.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 15548 16411 . - . ID=gene-AC00_RS07715;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AC00_RS07715;old_locus_tag=AC00_3597 NZ_JJLU01000107.1 Protein Homology CDS 15548 16411 . - 0 ID=cds-WP_032281647.1;Parent=gene-AC00_RS07715;Dbxref=GenBank:WP_032281647.1;Name=WP_032281647.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000809248.1;locus_tag=AC00_RS07715;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_032281647.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 16476 18512 . + . ID=gene-AC00_RS07710;Name=lpoA;gbkey=Gene;gene=lpoA;gene_biotype=protein_coding;locus_tag=AC00_RS07710;old_locus_tag=AC00_3598 NZ_JJLU01000107.1 Protein Homology CDS 16476 18512 . + 0 ID=cds-WP_032281649.1;Parent=gene-AC00_RS07710;Dbxref=GenBank:WP_032281649.1;Name=WP_032281649.1;gbkey=CDS;gene=lpoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312055.1;locus_tag=AC00_RS07710;product=penicillin-binding protein activator LpoA;protein_id=WP_032281649.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 18470 18865 . + . ID=gene-AC00_RS07705;Name=yraN;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=AC00_RS07705;old_locus_tag=AC00_3599 NZ_JJLU01000107.1 Protein Homology CDS 18470 18865 . + 0 ID=cds-WP_032281650.1;Parent=gene-AC00_RS07705;Dbxref=GenBank:WP_032281650.1;Name=WP_032281650.1;gbkey=CDS;gene=yraN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312056.1;locus_tag=AC00_RS07705;product=YraN family protein;protein_id=WP_032281650.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 18885 19475 . + . ID=gene-AC00_RS07700;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=AC00_RS07700;old_locus_tag=AC00_3600 NZ_JJLU01000107.1 Protein Homology CDS 18885 19475 . + 0 ID=cds-WP_001158034.1;Parent=gene-AC00_RS07700;Dbxref=GenBank:WP_001158034.1;Name=WP_001158034.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=AC00_RS07700;product=DnaA initiator-associating protein DiaA;protein_id=WP_001158034.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 19485 20060 . + . ID=gene-AC00_RS07695;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=AC00_RS07695;old_locus_tag=AC00_3601 NZ_JJLU01000107.1 Protein Homology CDS 19485 20060 . + 0 ID=cds-WP_000646033.1;Parent=gene-AC00_RS07695;Dbxref=GenBank:WP_000646033.1;Name=WP_000646033.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312058.1;locus_tag=AC00_RS07695;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_000646033.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 20174 21214 . - . ID=gene-AC00_RS07690;Name=yraQ;gbkey=Gene;gene=yraQ;gene_biotype=protein_coding;locus_tag=AC00_RS07690;old_locus_tag=AC00_3602 NZ_JJLU01000107.1 Protein Homology CDS 20174 21214 . - 0 ID=cds-WP_000147620.1;Parent=gene-AC00_RS07690;Dbxref=GenBank:WP_000147620.1;Name=WP_000147620.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yraQ;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312059.1;locus_tag=AC00_RS07690;product=permease;protein_id=WP_000147620.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 21287 21922 . - . ID=gene-AC00_RS07685;Name=yraR;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=AC00_RS07685;old_locus_tag=AC00_3603 NZ_JJLU01000107.1 Protein Homology CDS 21287 21922 . - 0 ID=cds-WP_032281651.1;Parent=gene-AC00_RS07685;Dbxref=GenBank:WP_032281651.1;Name=WP_032281651.1;gbkey=CDS;gene=yraR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312060.2;locus_tag=AC00_RS07685;product=NAD(P)H-binding protein;protein_id=WP_032281651.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 22050 22568 . + . ID=gene-AC00_RS07680;Name=yhbO;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=AC00_RS07680;old_locus_tag=AC00_3604 NZ_JJLU01000107.1 Protein Homology CDS 22050 22568 . + 0 ID=cds-WP_001491338.1;Parent=gene-AC00_RS07680;Dbxref=GenBank:WP_001491338.1;Name=WP_001491338.1;gbkey=CDS;gene=yhbO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=AC00_RS07680;product=protein/nucleic acid deglycase;protein_id=WP_001491338.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 22548 22991 . - . ID=gene-AC00_RS07675;Name=yhbP;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=AC00_RS07675;old_locus_tag=AC00_3605 NZ_JJLU01000107.1 Protein Homology CDS 22548 22991 . - 0 ID=cds-WP_032281652.1;Parent=gene-AC00_RS07675;Dbxref=GenBank:WP_032281652.1;Name=WP_032281652.1;gbkey=CDS;gene=yhbP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312062.1;locus_tag=AC00_RS07675;product=YhbP family protein;protein_id=WP_032281652.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 23042 23344 . + . ID=gene-AC00_RS07670;Name=yhbQ;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=AC00_RS07670;old_locus_tag=AC00_3606 NZ_JJLU01000107.1 Protein Homology CDS 23042 23344 . + 0 ID=cds-WP_000189310.1;Parent=gene-AC00_RS07670;Dbxref=GenBank:WP_000189310.1;Name=WP_000189310.1;gbkey=CDS;gene=yhbQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708956.2;locus_tag=AC00_RS07670;product=DNA damage response exodeoxyribonuclease YhbQ;protein_id=WP_000189310.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 23331 23834 . - . ID=gene-AC00_RS07665;Name=yhbS;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=AC00_RS07665;old_locus_tag=AC00_3607 NZ_JJLU01000107.1 Protein Homology CDS 23331 23834 . - 0 ID=cds-WP_032281653.1;Parent=gene-AC00_RS07665;Dbxref=GenBank:WP_032281653.1;Name=WP_032281653.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yhbS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312064.1;locus_tag=AC00_RS07665;product=GNAT family N-acetyltransferase;protein_id=WP_032281653.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 23828 24352 . - . ID=gene-AC00_RS07660;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=AC00_RS07660;old_locus_tag=AC00_3608 NZ_JJLU01000107.1 Protein Homology CDS 23828 24352 . - 0 ID=cds-WP_001295552.1;Parent=gene-AC00_RS07660;Dbxref=GenBank:WP_001295552.1;Name=WP_001295552.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=AC00_RS07660;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_001295552.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 24561 25556 . + . ID=gene-AC00_RS07655;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=AC00_RS07655;old_locus_tag=AC00_3609 NZ_JJLU01000107.1 Protein Homology CDS 24561 25556 . + 0 ID=cds-WP_000421305.1;Parent=gene-AC00_RS07655;Dbxref=GenBank:WP_000421305.1;Name=WP_000421305.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=AC00_RS07655;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_000421305.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 25565 26443 . + . ID=gene-AC00_RS07650;Name=ubiV;gbkey=Gene;gene=ubiV;gene_biotype=protein_coding;locus_tag=AC00_RS07650;old_locus_tag=AC00_3610 NZ_JJLU01000107.1 Protein Homology CDS 25565 26443 . + 0 ID=cds-WP_001297426.1;Parent=gene-AC00_RS07650;Dbxref=GenBank:WP_001297426.1;Name=WP_001297426.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiV;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312067.2;locus_tag=AC00_RS07650;product=U32 family peptidase;protein_id=WP_001297426.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 26524 27531 . + . ID=gene-AC00_RS07645;Name=yhbW;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=AC00_RS07645;old_locus_tag=AC00_3611 NZ_JJLU01000107.1 Protein Homology CDS 26524 27531 . + 0 ID=cds-WP_000130380.1;Parent=gene-AC00_RS07645;Dbxref=GenBank:WP_000130380.1;Name=WP_000130380.1;Ontology_term=GO:0016705;gbkey=CDS;gene=yhbW;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417629.1;locus_tag=AC00_RS07645;product=luciferase-like monooxygenase;protein_id=WP_000130380.1;transl_table=11 NZ_JJLU01000107.1 RefSeq pseudogene 27648 28891 . - . ID=gene-AC00_RS07640;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=pseudogene;locus_tag=AC00_RS07640;old_locus_tag=AC00_3612;pseudo=true NZ_JJLU01000107.1 Protein Homology CDS 27648 28891 . - 0 ID=cds-AC00_RS07640;Parent=gene-AC00_RS07640;Note=frameshifted;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417630.1;locus_tag=AC00_RS07640;product=tryptophan permease;pseudo=true;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 29045 30934 . - . ID=gene-AC00_RS07635;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=AC00_RS07635;old_locus_tag=AC00_3614 NZ_JJLU01000107.1 Protein Homology CDS 29045 30934 . - 0 ID=cds-WP_001301504.1;Parent=gene-AC00_RS07635;Dbxref=GenBank:WP_001301504.1;Name=WP_001301504.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312070.2;locus_tag=AC00_RS07635;product=ATP-dependent RNA helicase DeaD;protein_id=WP_001301504.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 30927 31007 . - . ID=gene-AC00_RS29765;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=AC00_RS29765 NZ_JJLU01000107.1 Protein Homology CDS 30927 31007 . - 0 ID=cds-WP_010723222.1;Parent=gene-AC00_RS29765;Dbxref=GenBank:WP_010723222.1;Name=WP_010723222.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=AC00_RS29765;product=protein YrbN;protein_id=WP_010723222.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 31114 31998 . - . ID=gene-AC00_RS07630;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=AC00_RS07630;old_locus_tag=AC00_3615 NZ_JJLU01000107.1 Protein Homology CDS 31114 31998 . - 0 ID=cds-WP_000802080.1;Parent=gene-AC00_RS07630;Dbxref=GenBank:WP_000802080.1;Name=WP_000802080.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=AC00_RS07630;product=lipoprotein NlpI;protein_id=WP_000802080.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 32107 34242 . - . ID=gene-AC00_RS07625;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AC00_RS07625;old_locus_tag=AC00_3616 NZ_JJLU01000107.1 Protein Homology CDS 32107 34242 . - 0 ID=cds-WP_001298330.1;Parent=gene-AC00_RS07625;Dbxref=GenBank:WP_001298330.1;Name=WP_001298330.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312072.2;locus_tag=AC00_RS07625;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001298330.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 34489 34758 . - . ID=gene-AC00_RS07620;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AC00_RS07620;old_locus_tag=AC00_3617 NZ_JJLU01000107.1 Protein Homology CDS 34489 34758 . - 0 ID=cds-WP_000059466.1;Parent=gene-AC00_RS07620;Dbxref=GenBank:WP_000059466.1;Name=WP_000059466.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=AC00_RS07620;product=30S ribosomal protein S15;protein_id=WP_000059466.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 34907 35851 . - . ID=gene-AC00_RS07615;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AC00_RS07615;old_locus_tag=AC00_3618 NZ_JJLU01000107.1 Protein Homology CDS 34907 35851 . - 0 ID=cds-WP_032281656.1;Parent=gene-AC00_RS07615;Dbxref=GenBank:WP_032281656.1;Name=WP_032281656.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312074.1;locus_tag=AC00_RS07615;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_032281656.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 35851 36252 . - . ID=gene-AC00_RS07610;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AC00_RS07610;old_locus_tag=AC00_3619 NZ_JJLU01000107.1 Protein Homology CDS 35851 36252 . - 0 ID=cds-WP_001040205.1;Parent=gene-AC00_RS07610;Dbxref=GenBank:WP_001040205.1;Name=WP_001040205.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=AC00_RS07610;product=30S ribosome-binding factor RbfA;protein_id=WP_001040205.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 36416 39088 . - . ID=gene-AC00_RS07605;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AC00_RS07605;old_locus_tag=AC00_3620 NZ_JJLU01000107.1 Protein Homology CDS 36416 39088 . - 0 ID=cds-WP_000133044.1;Parent=gene-AC00_RS07605;Dbxref=GenBank:WP_000133044.1;Name=WP_000133044.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312076.1;locus_tag=AC00_RS07605;product=translation initiation factor IF-2;protein_id=WP_000133044.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 39113 40600 . - . ID=gene-AC00_RS07600;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AC00_RS07600;old_locus_tag=AC00_3621 NZ_JJLU01000107.1 Protein Homology CDS 39113 40600 . - 0 ID=cds-WP_001031057.1;Parent=gene-AC00_RS07600;Dbxref=GenBank:WP_001031057.1;Name=WP_001031057.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=AC00_RS07600;product=transcription termination factor NusA;protein_id=WP_001031057.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 40628 41080 . - . ID=gene-AC00_RS07595;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=AC00_RS07595;old_locus_tag=AC00_3622 NZ_JJLU01000107.1 Protein Homology CDS 40628 41080 . - 0 ID=cds-WP_001300397.1;Parent=gene-AC00_RS07595;Dbxref=GenBank:WP_001300397.1;Name=WP_001300397.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=AC00_RS07595;product=ribosome maturation factor RimP;protein_id=WP_001300397.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 41287 41363 . - . ID=gene-AC00_RS07590;Name=AC00_RS07590;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS07590;old_locus_tag=AC00_3623 NZ_JJLU01000107.1 tRNAscan-SE tRNA 41287 41363 . - . ID=rna-AC00_RS07590;Parent=gene-AC00_RS07590;anticodon=(pos:complement(41327..41329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07590;product=tRNA-Met NZ_JJLU01000107.1 tRNAscan-SE exon 41287 41363 . - . ID=exon-AC00_RS07590-1;Parent=rna-AC00_RS07590;anticodon=(pos:complement(41327..41329));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07590;product=tRNA-Met NZ_JJLU01000107.1 RefSeq gene 41711 43054 . + . ID=gene-AC00_RS07585;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=AC00_RS07585;old_locus_tag=AC00_3624 NZ_JJLU01000107.1 Protein Homology CDS 41711 43054 . + 0 ID=cds-WP_000207683.1;Parent=gene-AC00_RS07585;Dbxref=GenBank:WP_000207683.1;Name=WP_000207683.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417640.1;locus_tag=AC00_RS07585;product=argininosuccinate synthase;protein_id=WP_000207683.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 43062 44687 . - . ID=gene-AC00_RS07580;Name=yhbX;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=AC00_RS07580;old_locus_tag=AC00_3625 NZ_JJLU01000107.1 Protein Homology CDS 43062 44687 . - 0 ID=cds-WP_077628339.1;Parent=gene-AC00_RS07580;Dbxref=GenBank:WP_077628339.1;Name=WP_077628339.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yhbX;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417641.4;locus_tag=AC00_RS07580;product=phosphoethanolamine transferase;protein_id=WP_077628339.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 45146 45232 . - . ID=gene-AC00_RS07575;Name=AC00_RS07575;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS07575;old_locus_tag=AC00_3626 NZ_JJLU01000107.1 tRNAscan-SE tRNA 45146 45232 . - . ID=rna-AC00_RS07575;Parent=gene-AC00_RS07575;anticodon=(pos:complement(45196..45198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07575;product=tRNA-Leu NZ_JJLU01000107.1 tRNAscan-SE exon 45146 45232 . - . ID=exon-AC00_RS07575-1;Parent=rna-AC00_RS07575;anticodon=(pos:complement(45196..45198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07575;product=tRNA-Leu NZ_JJLU01000107.1 RefSeq gene 45247 45579 . - . ID=gene-AC00_RS07570;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AC00_RS07570;old_locus_tag=AC00_3627 NZ_JJLU01000107.1 Protein Homology CDS 45247 45579 . - 0 ID=cds-WP_001295556.1;Parent=gene-AC00_RS07570;Dbxref=GenBank:WP_001295556.1;Name=WP_001295556.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312081.1;locus_tag=AC00_RS07570;product=preprotein translocase subunit SecG;protein_id=WP_001295556.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 45807 47144 . - . ID=gene-AC00_RS07565;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AC00_RS07565;old_locus_tag=AC00_3628 NZ_JJLU01000107.1 Protein Homology CDS 45807 47144 . - 0 ID=cds-WP_032281658.1;Parent=gene-AC00_RS07565;Dbxref=GenBank:WP_032281658.1;Name=WP_032281658.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312082.1;locus_tag=AC00_RS07565;product=phosphoglucosamine mutase;protein_id=WP_032281658.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 47137 47985 . - . ID=gene-AC00_RS07560;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AC00_RS07560;old_locus_tag=AC00_3629 NZ_JJLU01000107.1 Protein Homology CDS 47137 47985 . - 0 ID=cds-WP_000764731.1;Parent=gene-AC00_RS07560;Dbxref=GenBank:WP_000764731.1;Name=WP_000764731.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=AC00_RS07560;product=dihydropteroate synthase;protein_id=WP_000764731.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 48075 50009 . - . ID=gene-AC00_RS07555;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=AC00_RS07555;old_locus_tag=AC00_3630 NZ_JJLU01000107.1 Protein Homology CDS 48075 50009 . - 0 ID=cds-WP_001107467.1;Parent=gene-AC00_RS07555;Dbxref=GenBank:WP_001107467.1;Name=WP_001107467.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=AC00_RS07555;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001107467.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 50109 50738 . - . ID=gene-AC00_RS07550;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=AC00_RS07550;old_locus_tag=AC00_3631 NZ_JJLU01000107.1 Protein Homology CDS 50109 50738 . - 0 ID=cds-WP_000145975.1;Parent=gene-AC00_RS07550;Dbxref=GenBank:WP_000145975.1;Name=WP_000145975.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312085.1;locus_tag=AC00_RS07550;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_000145975.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 50864 51157 . + . ID=gene-AC00_RS07545;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AC00_RS07545;old_locus_tag=AC00_3632 NZ_JJLU01000107.1 Protein Homology CDS 50864 51157 . + 0 ID=cds-WP_001054420.1;Parent=gene-AC00_RS07545;Dbxref=GenBank:WP_001054420.1;Name=WP_001054420.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=AC00_RS07545;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001054420.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 51313 51789 . - . ID=gene-AC00_RS07540;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AC00_RS07540;old_locus_tag=AC00_3633 NZ_JJLU01000107.1 Protein Homology CDS 51313 51789 . - 0 ID=cds-WP_001148001.1;Parent=gene-AC00_RS07540;Dbxref=GenBank:WP_001148001.1;Name=WP_001148001.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=AC00_RS07540;product=transcription elongation factor GreA;protein_id=WP_001148001.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 52037 53470 . + . ID=gene-AC00_RS07535;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AC00_RS07535;old_locus_tag=AC00_3634 NZ_JJLU01000107.1 Protein Homology CDS 52037 53470 . + 0 ID=cds-WP_032281659.1;Parent=gene-AC00_RS07535;Dbxref=GenBank:WP_032281659.1;Name=WP_032281659.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=AC00_RS07535;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_032281659.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 53510 54682 . - . ID=gene-AC00_RS07530;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AC00_RS07530;old_locus_tag=AC00_3635 NZ_JJLU01000107.1 Protein Homology CDS 53510 54682 . - 0 ID=cds-WP_000673561.1;Parent=gene-AC00_RS07530;Dbxref=GenBank:WP_000673561.1;Name=WP_000673561.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708982.1;locus_tag=AC00_RS07530;product=Obg family GTPase CgtA;protein_id=WP_000673561.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 54698 55663 . - . ID=gene-AC00_RS07525;Name=yhbE;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=AC00_RS07525;old_locus_tag=AC00_3636 NZ_JJLU01000107.1 Protein Homology CDS 54698 55663 . - 0 ID=cds-WP_000813037.1;Parent=gene-AC00_RS07525;Dbxref=GenBank:WP_000813037.1;Name=WP_000813037.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhbE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=AC00_RS07525;product=DMT family transporter;protein_id=WP_000813037.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 55790 56047 . - . ID=gene-AC00_RS07520;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AC00_RS07520;old_locus_tag=AC00_3637 NZ_JJLU01000107.1 Protein Homology CDS 55790 56047 . - 0 ID=cds-WP_000940595.1;Parent=gene-AC00_RS07520;Dbxref=GenBank:WP_000940595.1;Name=WP_000940595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=AC00_RS07520;product=50S ribosomal protein L27;protein_id=WP_000940595.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 56068 56379 . - . ID=gene-AC00_RS07515;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AC00_RS07515;old_locus_tag=AC00_3638 NZ_JJLU01000107.1 Protein Homology CDS 56068 56379 . - 0 ID=cds-WP_000271401.1;Parent=gene-AC00_RS07515;Dbxref=GenBank:WP_000271401.1;Name=WP_000271401.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=AC00_RS07515;product=50S ribosomal protein L21;protein_id=WP_000271401.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 56638 57609 . + . ID=gene-AC00_RS07510;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=AC00_RS07510;old_locus_tag=AC00_3639 NZ_JJLU01000107.1 Protein Homology CDS 56638 57609 . + 0 ID=cds-WP_001047336.1;Parent=gene-AC00_RS07510;Dbxref=GenBank:WP_001047336.1;Name=WP_001047336.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=AC00_RS07510;product=octaprenyl diphosphate synthase;protein_id=WP_001047336.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 57837 58115 . + . ID=gene-AC00_RS07505;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=AC00_RS07505;old_locus_tag=AC00_3640 NZ_JJLU01000107.1 Protein Homology CDS 57837 58115 . + 0 ID=cds-WP_032281660.1;Parent=gene-AC00_RS07505;Dbxref=GenBank:WP_032281660.1;Name=WP_032281660.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417655.1;locus_tag=AC00_RS07505;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_032281660.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 58163 59422 . - . ID=gene-AC00_RS07500;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=AC00_RS07500;old_locus_tag=AC00_3641 NZ_JJLU01000107.1 Protein Homology CDS 58163 59422 . - 0 ID=cds-WP_032281661.1;Parent=gene-AC00_RS07500;Dbxref=GenBank:WP_032281661.1;Name=WP_032281661.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417656.1;locus_tag=AC00_RS07500;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_032281661.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 59477 59731 . - . ID=gene-AC00_RS07495;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=AC00_RS07495;old_locus_tag=AC00_3642 NZ_JJLU01000107.1 Protein Homology CDS 59477 59731 . - 0 ID=cds-WP_000429656.1;Parent=gene-AC00_RS07495;Dbxref=GenBank:WP_000429656.1;Name=WP_000429656.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417657.2;locus_tag=AC00_RS07495;product=BolA family iron metabolism protein IbaG;protein_id=WP_000429656.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 59891 60184 . - . ID=gene-AC00_RS07490;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=AC00_RS07490;old_locus_tag=AC00_3643 NZ_JJLU01000107.1 Protein Homology CDS 59891 60184 . - 0 ID=cds-WP_000004488.1;Parent=gene-AC00_RS07490;Dbxref=GenBank:WP_000004488.1;Name=WP_000004488.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312097.2;locus_tag=AC00_RS07490;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_000004488.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 60184 60819 . - . ID=gene-AC00_RS07485;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=AC00_RS07485;old_locus_tag=AC00_3644 NZ_JJLU01000107.1 Protein Homology CDS 60184 60819 . - 0 ID=cds-WP_000476484.1;Parent=gene-AC00_RS07485;Dbxref=GenBank:WP_000476484.1;Name=WP_000476484.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312098.1;locus_tag=AC00_RS07485;product=phospholipid-binding protein MlaC;protein_id=WP_000476484.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 60838 61389 . - . ID=gene-AC00_RS07480;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AC00_RS07480;old_locus_tag=AC00_3645 NZ_JJLU01000107.1 Protein Homology CDS 60838 61389 . - 0 ID=cds-WP_001296448.1;Parent=gene-AC00_RS07480;Dbxref=GenBank:WP_001296448.1;Name=WP_001296448.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312099.1;locus_tag=AC00_RS07480;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_001296448.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 61394 62176 . - . ID=gene-AC00_RS07475;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=AC00_RS07475;old_locus_tag=AC00_3646 NZ_JJLU01000107.1 Protein Homology CDS 61394 62176 . - 0 ID=cds-WP_000925795.1;Parent=gene-AC00_RS07475;Dbxref=GenBank:WP_000925795.1;Name=WP_000925795.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=AC00_RS07475;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_000925795.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 62184 62993 . - . ID=gene-AC00_RS07470;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=AC00_RS07470;old_locus_tag=AC00_3647 NZ_JJLU01000107.1 Protein Homology CDS 62184 62993 . - 0 ID=cds-WP_000438244.1;Parent=gene-AC00_RS07470;Dbxref=GenBank:WP_000438244.1;Name=WP_000438244.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312101.1;locus_tag=AC00_RS07470;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_000438244.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 63203 64180 . + . ID=gene-AC00_RS07465;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=AC00_RS07465;old_locus_tag=AC00_3648 NZ_JJLU01000107.1 Protein Homology CDS 63203 64180 . + 0 ID=cds-WP_000922872.1;Parent=gene-AC00_RS07465;Dbxref=GenBank:WP_000922872.1;Name=WP_000922872.1;gbkey=CDS;gene=yrbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312102.1;locus_tag=AC00_RS07465;product=calcium/sodium antiporter;protein_id=WP_000922872.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 64194 65180 . + . ID=gene-AC00_RS07460;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=AC00_RS07460;old_locus_tag=AC00_3649 NZ_JJLU01000107.1 Protein Homology CDS 64194 65180 . + 0 ID=cds-WP_032281662.1;Parent=gene-AC00_RS07460;Dbxref=GenBank:WP_032281662.1;Name=WP_032281662.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=AC00_RS07460;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_032281662.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 65201 65767 . + . ID=gene-AC00_RS07455;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=AC00_RS07455;old_locus_tag=AC00_3650 NZ_JJLU01000107.1 Protein Homology CDS 65201 65767 . + 0 ID=cds-WP_000030005.1;Parent=gene-AC00_RS07455;Dbxref=GenBank:WP_000030005.1;Name=WP_000030005.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312104.1;locus_tag=AC00_RS07455;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_000030005.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 65764 66339 . + . ID=gene-AC00_RS07450;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AC00_RS07450;old_locus_tag=AC00_3651 NZ_JJLU01000107.1 Protein Homology CDS 65764 66339 . + 0 ID=cds-WP_000030537.1;Parent=gene-AC00_RS07450;Dbxref=GenBank:WP_000030537.1;Name=WP_000030537.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312105.1;locus_tag=AC00_RS07450;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_000030537.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 66308 66865 . + . ID=gene-AC00_RS07445;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=AC00_RS07445;old_locus_tag=AC00_3652 NZ_JJLU01000107.1 Protein Homology CDS 66308 66865 . + 0 ID=cds-WP_000669785.1;Parent=gene-AC00_RS07445;Dbxref=GenBank:WP_000669785.1;Name=WP_000669785.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312106.1;locus_tag=AC00_RS07445;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_000669785.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 66872 67597 . + . ID=gene-AC00_RS07440;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AC00_RS07440;old_locus_tag=AC00_3653 NZ_JJLU01000107.1 Protein Homology CDS 66872 67597 . + 0 ID=cds-WP_000224099.1;Parent=gene-AC00_RS07440;Dbxref=GenBank:WP_000224099.1;Name=WP_000224099.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=AC00_RS07440;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_000224099.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 67645 69078 . + . ID=gene-AC00_RS07435;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=AC00_RS07435;old_locus_tag=AC00_3654 NZ_JJLU01000107.1 Protein Homology CDS 67645 69078 . + 0 ID=cds-WP_000809051.1;Parent=gene-AC00_RS07435;Dbxref=GenBank:WP_000809051.1;Name=WP_000809051.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312108.1;locus_tag=AC00_RS07435;product=RNA polymerase factor sigma-54;protein_id=WP_000809051.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 69101 69388 . + . ID=gene-AC00_RS07430;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AC00_RS07430;old_locus_tag=AC00_3655 NZ_JJLU01000107.1 Protein Homology CDS 69101 69388 . + 0 ID=cds-WP_001176599.1;Parent=gene-AC00_RS07430;Dbxref=GenBank:WP_001176599.1;Name=WP_001176599.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312109.1;locus_tag=AC00_RS07430;product=ribosome hibernation promoting factor;protein_id=WP_001176599.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 69506 69997 . + . ID=gene-AC00_RS07425;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=AC00_RS07425;old_locus_tag=AC00_3656 NZ_JJLU01000107.1 Protein Homology CDS 69506 69997 . + 0 ID=cds-WP_000183676.1;Parent=gene-AC00_RS07425;Dbxref=GenBank:WP_000183676.1;Name=WP_000183676.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417671.1;locus_tag=AC00_RS07425;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_000183676.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 70043 70897 . + . ID=gene-AC00_RS07420;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=AC00_RS07420;old_locus_tag=AC00_3657 NZ_JJLU01000107.1 Protein Homology CDS 70043 70897 . + 0 ID=cds-WP_000243741.1;Parent=gene-AC00_RS07420;Dbxref=GenBank:WP_000243741.1;Name=WP_000243741.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312111.1;locus_tag=AC00_RS07420;product=RNase adapter RapZ;protein_id=WP_000243741.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 70894 71166 . + . ID=gene-AC00_RS0125465;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=AC00_RS0125465;old_locus_tag=AC00_3658 NZ_JJLU01000107.1 Protein Homology CDS 70894 71166 . + 0 ID=cds-WP_000216791.1;Parent=gene-AC00_RS0125465;Dbxref=GenBank:WP_000216791.1;Name=WP_000216791.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=AC00_RS0125465;product=PTS phosphocarrier protein NPr;protein_id=WP_000216791.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 71379 72011 . + . ID=gene-AC00_RS07415;Name=yrbL;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=AC00_RS07415;old_locus_tag=AC00_3659 NZ_JJLU01000107.1 Protein Homology CDS 71379 72011 . + 0 ID=cds-WP_000620410.1;Parent=gene-AC00_RS07415;Dbxref=GenBank:WP_000620410.1;Name=WP_000620410.1;gbkey=CDS;gene=yrbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312113.1;locus_tag=AC00_RS07415;product=PhoP regulatory network protein YrbL;protein_id=WP_000620410.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 72008 72736 . - . ID=gene-AC00_RS07410;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=AC00_RS07410;old_locus_tag=AC00_3660 NZ_JJLU01000107.1 Protein Homology CDS 72008 72736 . - 0 ID=cds-WP_032281663.1;Parent=gene-AC00_RS07410;Dbxref=GenBank:WP_032281663.1;Name=WP_032281663.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417675.1;locus_tag=AC00_RS07410;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_032281663.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 72733 73386 . - . ID=gene-AC00_RS07405;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AC00_RS07405;old_locus_tag=AC00_3661 NZ_JJLU01000107.1 Protein Homology CDS 72733 73386 . - 0 ID=cds-WP_032281664.1;Parent=gene-AC00_RS07405;Dbxref=GenBank:WP_032281664.1;Name=WP_032281664.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709007.2;locus_tag=AC00_RS07405;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_032281664.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 73616 75952 . - . ID=gene-AC00_RS07400;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=AC00_RS07400;old_locus_tag=AC00_3662 NZ_JJLU01000107.1 Protein Homology CDS 73616 75952 . - 0 ID=cds-WP_001364218.1;Parent=gene-AC00_RS07400;Dbxref=GenBank:WP_001364218.1;Name=WP_001364218.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709008.1;locus_tag=AC00_RS07400;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_001364218.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 76048 76977 . - . ID=gene-AC00_RS07395;Name=yhcC;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=AC00_RS07395;old_locus_tag=AC00_3663 NZ_JJLU01000107.1 Protein Homology CDS 76048 76977 . - 0 ID=cds-WP_001362189.1;Parent=gene-AC00_RS07395;Dbxref=GenBank:WP_001362189.1;Name=WP_001362189.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;gene=yhcC;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=AC00_RS07395;product=TIGR01212 family radical SAM protein;protein_id=WP_001362189.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 77652 82112 . + . ID=gene-AC00_RS07390;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=AC00_RS07390;old_locus_tag=AC00_3664 NZ_JJLU01000107.1 Protein Homology CDS 77652 82112 . + 0 ID=cds-WP_032281679.1;Parent=gene-AC00_RS07390;Dbxref=GenBank:WP_032281679.1;Name=WP_032281679.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=AC00_RS07390;product=glutamate synthase large subunit;protein_id=WP_032281679.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 82125 83543 . + . ID=gene-AC00_RS07385;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=AC00_RS07385;old_locus_tag=AC00_3665 NZ_JJLU01000107.1 Protein Homology CDS 82125 83543 . + 0 ID=cds-WP_032281665.1;Parent=gene-AC00_RS07385;Dbxref=GenBank:WP_032281665.1;Name=WP_032281665.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=AC00_RS07385;product=glutamate synthase subunit GltD;protein_id=WP_032281665.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 83727 84854 . + . ID=gene-AC00_RS07380;Name=yhcG;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=AC00_RS07380;old_locus_tag=AC00_3666 NZ_JJLU01000107.1 Protein Homology CDS 83727 84854 . + 0 ID=cds-WP_032281666.1;Parent=gene-AC00_RS07380;Dbxref=GenBank:WP_032281666.1;Name=WP_032281666.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;gene=yhcG;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312120.1;locus_tag=AC00_RS07380;product=PDDEXK nuclease domain-containing protein;protein_id=WP_032281666.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 84914 85378 . - . ID=gene-AC00_RS07375;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=AC00_RS07375;old_locus_tag=AC00_3667 NZ_JJLU01000107.1 Protein Homology CDS 84914 85378 . - 0 ID=cds-WP_032281668.1;Parent=gene-AC00_RS07375;Dbxref=GenBank:WP_032281668.1;Name=WP_032281668.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312121.1;locus_tag=AC00_RS07375;product=N-acetylneuraminate anomerase;protein_id=WP_032281668.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 85375 86250 . - . ID=gene-AC00_RS07370;Name=nanK;gbkey=Gene;gene=nanK;gene_biotype=protein_coding;locus_tag=AC00_RS07370;old_locus_tag=AC00_3668 NZ_JJLU01000107.1 Protein Homology CDS 85375 86250 . - 0 ID=cds-WP_000209064.1;Parent=gene-AC00_RS07370;Dbxref=GenBank:WP_000209064.1;Name=WP_000209064.1;Ontology_term=GO:0019262,GO:0005524,GO:0009384;gbkey=CDS;gene=nanK;go_function=ATP binding|0005524||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312122.2;locus_tag=AC00_RS07370;product=N-acetylmannosamine kinase;protein_id=WP_000209064.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 86247 86936 . - . ID=gene-AC00_RS07365;Name=nanE;gbkey=Gene;gene=nanE;gene_biotype=protein_coding;locus_tag=AC00_RS07365;old_locus_tag=AC00_3669 NZ_JJLU01000107.1 Protein Homology CDS 86247 86936 . - 0 ID=cds-WP_001308081.1;Parent=gene-AC00_RS07365;Dbxref=GenBank:WP_001308081.1;Name=WP_001308081.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;gene=nanE;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312123.1;locus_tag=AC00_RS07365;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_001308081.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 86984 88474 . - . ID=gene-AC00_RS07360;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=AC00_RS07360;old_locus_tag=AC00_3670 NZ_JJLU01000107.1 Protein Homology CDS 86984 88474 . - 0 ID=cds-WP_000108458.1;Parent=gene-AC00_RS07360;Dbxref=GenBank:WP_000108458.1;Name=WP_000108458.1;gbkey=CDS;gene=nanT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312124.2;locus_tag=AC00_RS07360;product=sialic acid transporter NanT;protein_id=WP_000108458.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 88583 89476 . - . ID=gene-AC00_RS07355;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=AC00_RS07355;old_locus_tag=AC00_3671 NZ_JJLU01000107.1 Protein Homology CDS 88583 89476 . - 0 ID=cds-WP_000224714.1;Parent=gene-AC00_RS07355;Dbxref=GenBank:WP_000224714.1;Name=WP_000224714.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312125.1;locus_tag=AC00_RS07355;product=N-acetylneuraminate lyase;protein_id=WP_000224714.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 89598 90389 . - . ID=gene-AC00_RS07350;Name=nanR;gbkey=Gene;gene=nanR;gene_biotype=protein_coding;locus_tag=AC00_RS07350;old_locus_tag=AC00_3672 NZ_JJLU01000107.1 Protein Homology CDS 89598 90389 . - 0 ID=cds-WP_000523845.1;Parent=gene-AC00_RS07350;Dbxref=GenBank:WP_000523845.1;Name=WP_000523845.1;gbkey=CDS;gene=nanR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417693.3;locus_tag=AC00_RS07350;product=transcriptional regulator NanR;protein_id=WP_000523845.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 90769 92136 . + . ID=gene-AC00_RS07345;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=AC00_RS07345;old_locus_tag=AC00_3673 NZ_JJLU01000107.1 Protein Homology CDS 90769 92136 . + 0 ID=cds-WP_032281669.1;Parent=gene-AC00_RS07345;Dbxref=GenBank:WP_032281669.1;Name=WP_032281669.1;gbkey=CDS;gene=dcuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417694.1;locus_tag=AC00_RS07345;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_032281669.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 92178 92675 . - . ID=gene-AC00_RS07340;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=AC00_RS07340;old_locus_tag=AC00_3674 NZ_JJLU01000107.1 Protein Homology CDS 92178 92675 . - 0 ID=cds-WP_000366129.1;Parent=gene-AC00_RS07340;Dbxref=GenBank:WP_000366129.1;Name=WP_000366129.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312128.1;locus_tag=AC00_RS07340;product=ClpXP protease specificity-enhancing factor;protein_id=WP_000366129.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 92681 93319 . - . ID=gene-AC00_RS07335;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AC00_RS07335;old_locus_tag=AC00_3675 NZ_JJLU01000107.1 Protein Homology CDS 92681 93319 . - 0 ID=cds-WP_000257293.1;Parent=gene-AC00_RS07335;Dbxref=GenBank:WP_000257293.1;Name=WP_000257293.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312129.1;locus_tag=AC00_RS07335;product=stringent starvation protein SspA;protein_id=WP_000257293.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 93714 94106 . - . ID=gene-AC00_RS07330;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AC00_RS07330;old_locus_tag=AC00_3676 NZ_JJLU01000107.1 Protein Homology CDS 93714 94106 . - 0 ID=cds-WP_000829818.1;Parent=gene-AC00_RS07330;Dbxref=GenBank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=AC00_RS07330;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 94122 94550 . - . ID=gene-AC00_RS07325;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AC00_RS07325;old_locus_tag=AC00_3677 NZ_JJLU01000107.1 Protein Homology CDS 94122 94550 . - 0 ID=cds-WP_000847559.1;Parent=gene-AC00_RS07325;Dbxref=GenBank:WP_000847559.1;Name=WP_000847559.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=AC00_RS07325;product=50S ribosomal protein L13;protein_id=WP_000847559.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 94769 95896 . - . ID=gene-AC00_RS07320;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=AC00_RS07320;old_locus_tag=AC00_3678 NZ_JJLU01000107.1 Protein Homology CDS 94769 95896 . - 0 ID=cds-WP_001192334.1;Parent=gene-AC00_RS07320;Dbxref=GenBank:WP_001192334.1;Name=WP_001192334.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312132.1;locus_tag=AC00_RS07320;product=cell division protein ZapE;protein_id=WP_001192334.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 96090 96488 . + . ID=gene-AC00_RS07315;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=AC00_RS07315;old_locus_tag=AC00_3679 NZ_JJLU01000107.1 Protein Homology CDS 96090 96488 . + 0 ID=cds-WP_001295270.1;Parent=gene-AC00_RS07315;Dbxref=GenBank:WP_001295270.1;Name=WP_001295270.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=AC00_RS07315;product=Z-ring associated protein ZapG;protein_id=WP_001295270.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 96642 98009 . + . ID=gene-AC00_RS07310;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=AC00_RS07310;old_locus_tag=AC00_3680 NZ_JJLU01000107.1 Protein Homology CDS 96642 98009 . + 0 ID=cds-WP_032281670.1;Parent=gene-AC00_RS07310;Dbxref=GenBank:WP_032281670.1;Name=WP_032281670.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417701.1;locus_tag=AC00_RS07310;product=serine endoprotease DegQ;protein_id=WP_032281670.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 98099 99166 . + . ID=gene-AC00_RS07305;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=AC00_RS07305;old_locus_tag=AC00_3681 NZ_JJLU01000107.1 Protein Homology CDS 98099 99166 . + 0 ID=cds-WP_000497723.1;Parent=gene-AC00_RS07305;Dbxref=GenBank:WP_000497723.1;Name=WP_000497723.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=AC00_RS07305;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_000497723.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 99229 100167 . - . ID=gene-AC00_RS07300;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AC00_RS07300;old_locus_tag=AC00_3682 NZ_JJLU01000107.1 Protein Homology CDS 99229 100167 . - 0 ID=cds-WP_001295272.1;Parent=gene-AC00_RS07300;Dbxref=GenBank:WP_001295272.1;Name=WP_001295272.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=AC00_RS07300;product=malate dehydrogenase;protein_id=WP_001295272.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 100602 101072 . + . ID=gene-AC00_RS07295;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=AC00_RS07295;old_locus_tag=AC00_3683 NZ_JJLU01000107.1 Protein Homology CDS 100602 101072 . + 0 ID=cds-WP_001257846.1;Parent=gene-AC00_RS07295;Dbxref=GenBank:WP_001257846.1;Name=WP_001257846.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=AC00_RS07295;product=transcriptional regulator ArgR;protein_id=WP_001257846.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 101437 101700 . + . ID=gene-AC00_RS07290;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=AC00_RS07290;old_locus_tag=AC00_3684 NZ_JJLU01000107.1 Protein Homology CDS 101437 101700 . + 0 ID=cds-WP_000695690.1;Parent=gene-AC00_RS07290;Dbxref=GenBank:WP_000695690.1;Name=WP_000695690.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417705.2;locus_tag=AC00_RS07290;product=peroxide/acid stress response protein YhcN;protein_id=WP_000695690.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 101756 102028 . - . ID=gene-AC00_RS07285;Name=yhcO;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=AC00_RS07285;old_locus_tag=AC00_3685 NZ_JJLU01000107.1 Protein Homology CDS 101756 102028 . - 0 ID=cds-WP_001029005.1;Parent=gene-AC00_RS07285;Dbxref=GenBank:WP_001029005.1;Name=WP_001029005.1;gbkey=CDS;gene=yhcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312139.1;locus_tag=AC00_RS07285;product=barstar family protein;protein_id=WP_001029005.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 102120 104087 . - . ID=gene-AC00_RS07280;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=AC00_RS07280;old_locus_tag=AC00_3686 NZ_JJLU01000107.1 Protein Homology CDS 102120 104087 . - 0 ID=cds-WP_000510962.1;Parent=gene-AC00_RS07280;Dbxref=GenBank:WP_000510962.1;Name=WP_000510962.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709037.1;locus_tag=AC00_RS07280;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_000510962.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 104093 105025 . - . ID=gene-AC00_RS07275;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=AC00_RS07275;old_locus_tag=AC00_3687 NZ_JJLU01000107.1 Protein Homology CDS 104093 105025 . - 0 ID=cds-WP_000854033.1;Parent=gene-AC00_RS07275;Dbxref=GenBank:WP_000854033.1;Name=WP_000854033.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417708.1;locus_tag=AC00_RS07275;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_000854033.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 105033 105236 . - . ID=gene-AC00_RS07270;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=AC00_RS07270;old_locus_tag=AC00_3688 NZ_JJLU01000107.1 Protein Homology CDS 105033 105236 . - 0 ID=cds-WP_000051841.1;Parent=gene-AC00_RS07270;Dbxref=GenBank:WP_000051841.1;Name=WP_000051841.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=AC00_RS07270;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_000051841.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 105419 106348 . + . ID=gene-AC00_RS07265;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=AC00_RS07265;old_locus_tag=AC00_3689 NZ_JJLU01000107.1 Protein Homology CDS 105419 106348 . + 0 ID=cds-WP_000440317.1;Parent=gene-AC00_RS07265;Dbxref=GenBank:WP_000440317.1;Name=WP_000440317.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312143.1;locus_tag=AC00_RS07265;product=HTH-type transcriptional activator AaeR;protein_id=WP_000440317.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 106482 107927 . - . ID=gene-AC00_RS07260;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=AC00_RS07260;old_locus_tag=AC00_3690 NZ_JJLU01000107.1 Protein Homology CDS 106482 107927 . - 0 ID=cds-WP_000055909.1;Parent=gene-AC00_RS07260;Dbxref=GenBank:WP_000055909.1;Name=WP_000055909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417711.1;locus_tag=AC00_RS07260;product=metalloprotease TldD;protein_id=WP_000055909.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 108083 111883 . - . ID=gene-AC00_RS07255;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=AC00_RS07255;old_locus_tag=AC00_3691 NZ_JJLU01000107.1 Protein Homology CDS 108083 111883 . - 0 ID=cds-WP_032281671.1;Parent=gene-AC00_RS07255;Dbxref=GenBank:WP_032281671.1;Name=WP_032281671.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026208.1;locus_tag=AC00_RS07255;product=AsmA2 domain-containing protein YhdP;protein_id=WP_032281671.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 111951 113420 . - . ID=gene-AC00_RS07250;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=AC00_RS07250;old_locus_tag=AC00_3692 NZ_JJLU01000107.1 Protein Homology CDS 111951 113420 . - 0 ID=cds-WP_000123197.1;Parent=gene-AC00_RS07250;Dbxref=GenBank:WP_000123197.1;Name=WP_000123197.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=AC00_RS07250;product=ribonuclease G;protein_id=WP_000123197.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 113410 114003 . - . ID=gene-AC00_RS07245;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=AC00_RS07245;old_locus_tag=AC00_3693 NZ_JJLU01000107.1 Protein Homology CDS 113410 114003 . - 0 ID=cds-WP_032281673.1;Parent=gene-AC00_RS07245;Dbxref=GenBank:WP_032281673.1;Name=WP_032281673.1;gbkey=CDS;gene=yhdE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417714.1;locus_tag=AC00_RS07245;product=nucleoside triphosphate pyrophosphatase YhdE;protein_id=WP_032281673.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 114012 114500 . - . ID=gene-AC00_RS07240;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=AC00_RS07240;old_locus_tag=AC00_3694 NZ_JJLU01000107.1 Protein Homology CDS 114012 114500 . - 0 ID=cds-WP_000179409.1;Parent=gene-AC00_RS07240;Dbxref=GenBank:WP_000179409.1;Name=WP_000179409.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=AC00_RS07240;product=rod shape-determining protein MreD;protein_id=WP_000179409.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 114500 115603 . - . ID=gene-AC00_RS07235;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=AC00_RS07235;old_locus_tag=AC00_3695 NZ_JJLU01000107.1 Protein Homology CDS 114500 115603 . - 0 ID=cds-WP_000802516.1;Parent=gene-AC00_RS07235;Dbxref=GenBank:WP_000802516.1;Name=WP_000802516.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312149.1;locus_tag=AC00_RS07235;product=rod shape-determining protein MreC;protein_id=WP_000802516.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 115669 116712 . - . ID=gene-AC00_RS07230;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=AC00_RS07230;old_locus_tag=AC00_3696 NZ_JJLU01000107.1 Protein Homology CDS 115669 116712 . - 0 ID=cds-WP_000913396.1;Parent=gene-AC00_RS07230;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=AC00_RS07230;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 117017 118957 . - . ID=gene-AC00_RS07225;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=AC00_RS07225;old_locus_tag=AC00_3697 NZ_JJLU01000107.1 Protein Homology CDS 117017 118957 . - 0 ID=cds-WP_001241419.1;Parent=gene-AC00_RS07225;Dbxref=GenBank:WP_001241419.1;Name=WP_001241419.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312151.1;locus_tag=AC00_RS07225;product=RNase E specificity factor CsrD;protein_id=WP_001241419.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 119109 120083 . + . ID=gene-AC00_RS07220;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=AC00_RS07220;old_locus_tag=AC00_3698 NZ_JJLU01000107.1 Protein Homology CDS 119109 120083 . + 0 ID=cds-WP_032281674.1;Parent=gene-AC00_RS07220;Dbxref=GenBank:WP_032281674.1;Name=WP_032281674.1;Ontology_term=GO:0004022,GO:0008270,GO:0030554;gbkey=CDS;gene=yhdH;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312152.1;locus_tag=AC00_RS07220;product=MDR family oxidoreductase;protein_id=WP_032281674.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 121061 121531 . + . ID=gene-AC00_RS07210;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AC00_RS07210;old_locus_tag=AC00_3701 NZ_JJLU01000107.1 Protein Homology CDS 121061 121531 . + 0 ID=cds-WP_000354622.1;Parent=gene-AC00_RS07210;Dbxref=GenBank:WP_000354622.1;Name=WP_000354622.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=AC00_RS07210;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_000354622.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 121542 122891 . + . ID=gene-AC00_RS07205;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AC00_RS07205;old_locus_tag=AC00_3702 NZ_JJLU01000107.1 Protein Homology CDS 121542 122891 . + 0 ID=cds-WP_000884639.1;Parent=gene-AC00_RS07205;Dbxref=GenBank:WP_000884639.1;Name=WP_000884639.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=AC00_RS07205;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_000884639.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 123000 123242 . + . ID=gene-AC00_RS07200;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=AC00_RS07200;old_locus_tag=AC00_3703 NZ_JJLU01000107.1 Protein Homology CDS 123000 123242 . + 0 ID=cds-WP_000381170.1;Parent=gene-AC00_RS07200;Dbxref=GenBank:WP_000381170.1;Name=WP_000381170.1;gbkey=CDS;gene=yhdT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312156.1;locus_tag=AC00_RS07200;product=YhdT family protein;protein_id=WP_000381170.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 123232 124683 . + . ID=gene-AC00_RS07195;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AC00_RS07195;old_locus_tag=AC00_3704 NZ_JJLU01000107.1 Protein Homology CDS 123232 124683 . + 0 ID=cds-WP_032281675.1;Parent=gene-AC00_RS07195;Dbxref=GenBank:WP_032281675.1;Name=WP_032281675.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=AC00_RS07195;product=sodium/pantothenate symporter;protein_id=WP_032281675.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 124695 125576 . + . ID=gene-AC00_RS07190;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AC00_RS07190;old_locus_tag=AC00_3705 NZ_JJLU01000107.1 Protein Homology CDS 124695 125576 . + 0 ID=cds-WP_001145821.1;Parent=gene-AC00_RS07190;Dbxref=GenBank:WP_001145821.1;Name=WP_001145821.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312158.1;locus_tag=AC00_RS07190;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_001145821.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 125905 126870 . + . ID=gene-AC00_RS07185;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=AC00_RS07185;old_locus_tag=AC00_3706 NZ_JJLU01000107.1 Protein Homology CDS 125905 126870 . + 0 ID=cds-WP_001219652.1;Parent=gene-AC00_RS07185;Dbxref=GenBank:WP_001219652.1;Name=WP_001219652.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=AC00_RS07185;product=tRNA dihydrouridine synthase DusB;protein_id=WP_001219652.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 126896 127192 . + . ID=gene-AC00_RS07180;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AC00_RS07180;old_locus_tag=AC00_3707 NZ_JJLU01000107.1 Protein Homology CDS 126896 127192 . + 0 ID=cds-WP_000462905.1;Parent=gene-AC00_RS07180;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=AC00_RS07180;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 127278 128162 . + . ID=gene-AC00_RS07175;Name=yhdJ;gbkey=Gene;gene=yhdJ;gene_biotype=protein_coding;locus_tag=AC00_RS07175;old_locus_tag=AC00_3708 NZ_JJLU01000107.1 Protein Homology CDS 127278 128162 . + 0 ID=cds-WP_032281676.1;Parent=gene-AC00_RS07175;Dbxref=GenBank:WP_032281676.1;Name=WP_032281676.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;gene=yhdJ;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312161.2;locus_tag=AC00_RS07175;product=adenine-specific DNA-methyltransferase;protein_id=WP_032281676.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 128246 128425 . + . ID=gene-AC00_RS07170;Name=yhdU;gbkey=Gene;gene=yhdU;gene_biotype=protein_coding;locus_tag=AC00_RS07170;old_locus_tag=AC00_3709 NZ_JJLU01000107.1 Protein Homology CDS 128246 128425 . + 0 ID=cds-WP_001295275.1;Parent=gene-AC00_RS07170;Dbxref=GenBank:WP_001295275.1;Name=WP_001295275.1;gbkey=CDS;gene=yhdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312162.1;locus_tag=AC00_RS07170;product=DUF2556 family protein;protein_id=WP_001295275.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 128428 129090 . - . ID=gene-AC00_RS07165;Name=acrS;gbkey=Gene;gene=acrS;gene_biotype=protein_coding;locus_tag=AC00_RS07165;old_locus_tag=AC00_3710 NZ_JJLU01000107.1 Protein Homology CDS 128428 129090 . - 0 ID=cds-WP_001603879.1;Parent=gene-AC00_RS07165;Dbxref=GenBank:WP_001603879.1;Name=WP_001603879.1;gbkey=CDS;gene=acrS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312163.1;locus_tag=AC00_RS07165;product=multidrug efflux transporter transcriptional repressor AcrS;protein_id=WP_001603879.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 129489 130646 . + . ID=gene-AC00_RS07160;Name=acrE;gbkey=Gene;gene=acrE;gene_biotype=protein_coding;locus_tag=AC00_RS07160;old_locus_tag=AC00_3711 NZ_JJLU01000107.1 Protein Homology CDS 129489 130646 . + 0 ID=cds-WP_000160336.1;Parent=gene-AC00_RS07160;Dbxref=GenBank:WP_000160336.1;Name=WP_000160336.1;gbkey=CDS;gene=acrE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312164.1;locus_tag=AC00_RS07160;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrE;protein_id=WP_000160336.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 130658 133762 . + . ID=gene-AC00_RS07155;Name=acrF;gbkey=Gene;gene=acrF;gene_biotype=protein_coding;locus_tag=AC00_RS07155;old_locus_tag=AC00_3712 NZ_JJLU01000107.1 Protein Homology CDS 130658 133762 . + 0 ID=cds-WP_032281677.1;Parent=gene-AC00_RS07155;Dbxref=GenBank:WP_032281677.1;Name=WP_032281677.1;gbkey=CDS;gene=acrF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417732.1;locus_tag=AC00_RS07155;product=multidrug efflux RND transporter permease subunit AcrF;protein_id=WP_032281677.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 134015 134236 . + . ID=gene-AC00_RS07150;Name=AC00_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07150;old_locus_tag=AC00_3713 NZ_JJLU01000107.1 Protein Homology CDS 134015 134236 . + 0 ID=cds-WP_000825639.1;Parent=gene-AC00_RS07150;Dbxref=GenBank:WP_000825639.1;Name=WP_000825639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=AC00_RS07150;product=membrane protein;protein_id=WP_000825639.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 134667 135692 . + . ID=gene-AC00_RS07145;Name=AC00_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07145;old_locus_tag=AC00_3715 NZ_JJLU01000107.1 Protein Homology CDS 134667 135692 . + 0 ID=cds-WP_000738568.1;Parent=gene-AC00_RS07145;Dbxref=GenBank:WP_000738568.1;Name=WP_000738568.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121390.1;locus_tag=AC00_RS07145;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_000738568.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 135760 136941 . + . ID=gene-AC00_RS07140;Name=yhdX;gbkey=Gene;gene=yhdX;gene_biotype=protein_coding;locus_tag=AC00_RS07140;old_locus_tag=AC00_3716 NZ_JJLU01000107.1 Protein Homology CDS 135760 136941 . + 0 ID=cds-WP_000019655.1;Parent=gene-AC00_RS07140;Dbxref=GenBank:WP_000019655.1;Name=WP_000019655.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;gene=yhdX;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026209.1;locus_tag=AC00_RS07140;product=amino acid ABC transporter permease;protein_id=WP_000019655.1;transl_table=11 NZ_JJLU01000107.1 RefSeq pseudogene 136951 138053 . + . ID=gene-AC00_RS0125490;Name=yhdY;gbkey=Gene;gene=yhdY;gene_biotype=pseudogene;locus_tag=AC00_RS0125490;pseudo=true NZ_JJLU01000107.1 Protein Homology CDS 136951 138053 . + 0 ID=cds-AC00_RS0125490;Parent=gene-AC00_RS0125490;Note=frameshifted;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdY;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417736.2;locus_tag=AC00_RS0125490;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 138061 138819 . + . ID=gene-AC00_RS07135;Name=yhdZ;gbkey=Gene;gene=yhdZ;gene_biotype=protein_coding;locus_tag=AC00_RS07135;old_locus_tag=AC00_3719 NZ_JJLU01000107.1 Protein Homology CDS 138061 138819 . + 0 ID=cds-WP_000078338.1;Parent=gene-AC00_RS07135;Dbxref=GenBank:WP_000078338.1;Name=WP_000078338.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;gene=yhdZ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312171.1;locus_tag=AC00_RS07135;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_000078338.1;transl_table=11 NZ_JJLU01000107.1 RefSeq gene 138882 138997 . - . ID=gene-AC00_RS07130;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS07130;old_locus_tag=AC00_3720 NZ_JJLU01000107.1 cmsearch rRNA 138882 138997 . - . ID=rna-AC00_RS07130;Parent=gene-AC00_RS07130;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS07130;product=5S ribosomal RNA NZ_JJLU01000107.1 cmsearch exon 138882 138997 . - . ID=exon-AC00_RS07130-1;Parent=rna-AC00_RS07130;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS07130;product=5S ribosomal RNA NZ_JJLU01000107.1 RefSeq gene 139037 139112 . - . ID=gene-AC00_RS07125;Name=AC00_RS07125;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS07125;old_locus_tag=AC00_3721 NZ_JJLU01000107.1 tRNAscan-SE tRNA 139037 139112 . - . ID=rna-AC00_RS07125;Parent=gene-AC00_RS07125;anticodon=(pos:complement(139077..139079));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07125;product=tRNA-Thr NZ_JJLU01000107.1 tRNAscan-SE exon 139037 139112 . - . ID=exon-AC00_RS07125-1;Parent=rna-AC00_RS07125;anticodon=(pos:complement(139077..139079));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07125;product=tRNA-Thr NZ_JJLU01000107.1 RefSeq gene 139127 139242 . - . ID=gene-AC00_RS07120;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS07120;old_locus_tag=AC00_3722 NZ_JJLU01000107.1 cmsearch rRNA 139127 139242 . - . ID=rna-AC00_RS07120;Parent=gene-AC00_RS07120;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS07120;product=5S ribosomal RNA NZ_JJLU01000107.1 cmsearch exon 139127 139242 . - . ID=exon-AC00_RS07120-1;Parent=rna-AC00_RS07120;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS07120;product=5S ribosomal RNA NZ_JJLU01000107.1 RefSeq gene 139282 139357 . - . ID=gene-AC00_RS07115;Name=AC00_RS07115;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS07115;old_locus_tag=AC00_3723 NZ_JJLU01000107.1 tRNAscan-SE tRNA 139282 139357 . - . ID=rna-AC00_RS07115;Parent=gene-AC00_RS07115;anticodon=(pos:complement(139322..139324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07115;product=tRNA-Thr NZ_JJLU01000107.1 tRNAscan-SE exon 139282 139357 . - . ID=exon-AC00_RS07115-1;Parent=rna-AC00_RS07115;anticodon=(pos:complement(139322..139324));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS07115;product=tRNA-Thr NZ_JJLU01000107.1 RefSeq gene 139372 139487 . - . ID=gene-AC00_RS0125495;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS0125495 NZ_JJLU01000107.1 cmsearch rRNA 139372 139487 . - . ID=rna-AC00_RS0125495;Parent=gene-AC00_RS0125495;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125495;product=5S ribosomal RNA NZ_JJLU01000107.1 cmsearch exon 139372 139487 . - . ID=exon-AC00_RS0125495-1;Parent=rna-AC00_RS0125495;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125495;product=5S ribosomal RNA ##sequence-region NZ_JJLU01000108.1 1 27855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000108.1 RefSeq region 1 27855 . + . ID=NZ_JJLU01000108.1:1..27855;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000108.1 RefSeq gene 1 992 . - . ID=gene-AC00_RS0125500;Name=AC00_RS0125500;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS0125500;partial=true;start_range=.,1 NZ_JJLU01000108.1 cmsearch rRNA 1 992 . - . ID=rna-AC00_RS0125500;Parent=gene-AC00_RS0125500;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125500;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000108.1 cmsearch exon 1 992 . - . ID=exon-AC00_RS0125500-1;Parent=rna-AC00_RS0125500;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125500;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000108.1 RefSeq gene 1465 2019 . + . ID=gene-AC00_RS07110;Name=AC00_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07110;old_locus_tag=AC00_3726 NZ_JJLU01000108.1 Protein Homology CDS 1465 2019 . + 0 ID=cds-WP_001286216.1;Parent=gene-AC00_RS07110;Dbxref=GenBank:WP_001286216.1;Name=WP_001286216.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417738.4;locus_tag=AC00_RS07110;product=gamma carbonic anhydrase family protein;protein_id=WP_001286216.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 1995 2252 . - . ID=gene-AC00_RS0125505;Name=AC00_RS0125505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125505;old_locus_tag=AC00_3727 NZ_JJLU01000108.1 Protein Homology CDS 1995 2252 . - 0 ID=cds-WP_001070559.1;Parent=gene-AC00_RS0125505;Dbxref=GenBank:WP_001070559.1;Name=WP_001070559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312173.1;locus_tag=AC00_RS0125505;product=DUF1488 domain-containing protein;protein_id=WP_001070559.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 2249 3067 . - . ID=gene-AC00_RS07105;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=AC00_RS07105;old_locus_tag=AC00_3728 NZ_JJLU01000108.1 Protein Homology CDS 2249 3067 . - 0 ID=cds-WP_032281680.1;Parent=gene-AC00_RS07105;Dbxref=GenBank:WP_032281680.1;Name=WP_032281680.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709069.2;locus_tag=AC00_RS07105;product=shikimate dehydrogenase;protein_id=WP_032281680.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 3072 3644 . - . ID=gene-AC00_RS07100;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=AC00_RS07100;old_locus_tag=AC00_3729 NZ_JJLU01000108.1 Protein Homology CDS 3072 3644 . - 0 ID=cds-WP_001301437.1;Parent=gene-AC00_RS07100;Dbxref=GenBank:WP_001301437.1;Name=WP_001301437.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312175.1;locus_tag=AC00_RS07100;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_001301437.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 3649 4191 . - . ID=gene-AC00_RS07095;Name=AC00_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07095;old_locus_tag=AC00_3730 NZ_JJLU01000108.1 Protein Homology CDS 3649 4191 . - 0 ID=cds-WP_001129722.1;Parent=gene-AC00_RS07095;Dbxref=GenBank:WP_001129722.1;Name=WP_001129722.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026210.1;locus_tag=AC00_RS07095;product=DNA topoisomerase family protein;protein_id=WP_001129722.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 4220 4693 . - . ID=gene-AC00_RS07090;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=AC00_RS07090;old_locus_tag=AC00_3731 NZ_JJLU01000108.1 Protein Homology CDS 4220 4693 . - 0 ID=cds-WP_000460672.1;Parent=gene-AC00_RS07090;Dbxref=GenBank:WP_000460672.1;Name=WP_000460672.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=AC00_RS07090;product=DUF494 family protein Smg;protein_id=WP_000460672.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 4665 5789 . - . ID=gene-AC00_RS07085;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=AC00_RS07085;old_locus_tag=AC00_3732 NZ_JJLU01000108.1 Protein Homology CDS 4665 5789 . - 0 ID=cds-WP_032281681.1;Parent=gene-AC00_RS07085;Dbxref=GenBank:WP_032281681.1;Name=WP_032281681.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026211.1;locus_tag=AC00_RS07085;product=DNA-protecting protein DprA;protein_id=WP_032281681.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 5919 6428 . + . ID=gene-AC00_RS07080;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AC00_RS07080;old_locus_tag=AC00_3733 NZ_JJLU01000108.1 Protein Homology CDS 5919 6428 . + 0 ID=cds-WP_000114984.1;Parent=gene-AC00_RS07080;Dbxref=GenBank:WP_000114984.1;Name=WP_000114984.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=AC00_RS07080;product=peptide deformylase;protein_id=WP_000114984.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 6443 7390 . + . ID=gene-AC00_RS07075;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AC00_RS07075;old_locus_tag=AC00_3734 NZ_JJLU01000108.1 Protein Homology CDS 6443 7390 . + 0 ID=cds-WP_000004459.1;Parent=gene-AC00_RS07075;Dbxref=GenBank:WP_000004459.1;Name=WP_000004459.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312180.1;locus_tag=AC00_RS07075;product=methionyl-tRNA formyltransferase;protein_id=WP_000004459.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 7436 8725 . + . ID=gene-AC00_RS07070;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=AC00_RS07070;old_locus_tag=AC00_3735 NZ_JJLU01000108.1 Protein Homology CDS 7436 8725 . + 0 ID=cds-WP_032222877.1;Parent=gene-AC00_RS07070;Dbxref=GenBank:WP_032222877.1;Name=WP_032222877.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417747.1;locus_tag=AC00_RS07070;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_032222877.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 8747 10123 . + . ID=gene-AC00_RS07065;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AC00_RS07065;old_locus_tag=AC00_3736 NZ_JJLU01000108.1 Protein Homology CDS 8747 10123 . + 0 ID=cds-WP_032222880.1;Parent=gene-AC00_RS07065;Dbxref=GenBank:WP_032222880.1;Name=WP_032222880.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=AC00_RS07065;product=Trk system potassium transporter TrkA;protein_id=WP_032222880.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 10253 10663 . + . ID=gene-AC00_RS07060;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=AC00_RS07060;old_locus_tag=AC00_3737 NZ_JJLU01000108.1 Protein Homology CDS 10253 10663 . + 0 ID=cds-WP_000022442.1;Parent=gene-AC00_RS07060;Dbxref=GenBank:WP_000022442.1;Name=WP_000022442.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312183.1;locus_tag=AC00_RS07060;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_000022442.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 10660 10878 . - . ID=gene-AC00_RS07055;Name=arfA;gbkey=Gene;gene=arfA;gene_biotype=protein_coding;locus_tag=AC00_RS07055;old_locus_tag=AC00_3738 NZ_JJLU01000108.1 Protein Homology CDS 10660 10878 . - 0 ID=cds-WP_000092692.1;Parent=gene-AC00_RS07055;Dbxref=GenBank:WP_000092692.1;Name=WP_000092692.1;gbkey=CDS;gene=arfA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588467.1;locus_tag=AC00_RS07055;product=alternative ribosome-rescue factor ArfA;protein_id=WP_000092692.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 10934 11359 . - . ID=gene-AC00_RS07050;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=AC00_RS07050;old_locus_tag=AC00_3739 NZ_JJLU01000108.1 Protein Homology CDS 10934 11359 . - 0 ID=cds-WP_000285607.1;Parent=gene-AC00_RS07050;Dbxref=GenBank:WP_000285607.1;Name=WP_000285607.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312184.1;locus_tag=AC00_RS07050;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_000285607.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 11370 11738 . - . ID=gene-AC00_RS07045;Name=AC00_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07045;old_locus_tag=AC00_3740 NZ_JJLU01000108.1 Protein Homology CDS 11370 11738 . - 0 ID=cds-WP_000266502.1;Parent=gene-AC00_RS07045;Dbxref=GenBank:WP_000266502.1;Name=WP_000266502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312185.1;locus_tag=AC00_RS07045;product=DUF1992 domain-containing protein;protein_id=WP_000266502.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 11845 12228 . - . ID=gene-AC00_RS07040;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AC00_RS07040;old_locus_tag=AC00_3741 NZ_JJLU01000108.1 Protein Homology CDS 11845 12228 . - 0 ID=cds-WP_001216368.1;Parent=gene-AC00_RS07040;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=AC00_RS07040;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 12269 13258 . - . ID=gene-AC00_RS07035;Name=AC00_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS07035;old_locus_tag=AC00_3742 NZ_JJLU01000108.1 Protein Homology CDS 12269 13258 . - 0 ID=cds-WP_001162094.1;Parent=gene-AC00_RS07035;Dbxref=GenBank:WP_001162094.1;Name=WP_001162094.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=AC00_RS07035;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001162094.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 13284 13904 . - . ID=gene-AC00_RS07030;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AC00_RS07030;old_locus_tag=AC00_3743 NZ_JJLU01000108.1 Protein Homology CDS 13284 13904 . - 0 ID=cds-WP_000135224.1;Parent=gene-AC00_RS07030;Dbxref=GenBank:WP_000135224.1;Name=WP_000135224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=AC00_RS07030;product=30S ribosomal protein S4;protein_id=WP_000135224.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 13938 14327 . - . ID=gene-AC00_RS07025;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AC00_RS07025;old_locus_tag=AC00_3744 NZ_JJLU01000108.1 Protein Homology CDS 13938 14327 . - 0 ID=cds-WP_001029684.1;Parent=gene-AC00_RS07025;Dbxref=GenBank:WP_001029684.1;Name=WP_001029684.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=AC00_RS07025;product=30S ribosomal protein S11;protein_id=WP_001029684.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 14344 14700 . - . ID=gene-AC00_RS07020;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AC00_RS07020;old_locus_tag=AC00_3745 NZ_JJLU01000108.1 Protein Homology CDS 14344 14700 . - 0 ID=cds-WP_000090775.1;Parent=gene-AC00_RS07020;Dbxref=GenBank:WP_000090775.1;Name=WP_000090775.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=AC00_RS07020;product=30S ribosomal protein S13;protein_id=WP_000090775.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 14847 14963 . - . ID=gene-AC00_RS07015;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AC00_RS07015;old_locus_tag=AC00_3746 NZ_JJLU01000108.1 Protein Homology CDS 14847 14963 . - 0 ID=cds-WP_000868187.1;Parent=gene-AC00_RS07015;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=AC00_RS07015;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 14995 16326 . - . ID=gene-AC00_RS07010;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AC00_RS07010;old_locus_tag=AC00_3747 NZ_JJLU01000108.1 Protein Homology CDS 14995 16326 . - 0 ID=cds-WP_001464713.1;Parent=gene-AC00_RS07010;Dbxref=GenBank:WP_001464713.1;Name=WP_001464713.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=AC00_RS07010;product=preprotein translocase subunit SecY;protein_id=WP_001464713.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 16334 16768 . - . ID=gene-AC00_RS07005;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AC00_RS07005;old_locus_tag=AC00_3748 NZ_JJLU01000108.1 Protein Homology CDS 16334 16768 . - 0 ID=cds-WP_001238917.1;Parent=gene-AC00_RS07005;Dbxref=GenBank:WP_001238917.1;Name=WP_001238917.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=AC00_RS07005;product=50S ribosomal protein L15;protein_id=WP_001238917.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 16772 16951 . - . ID=gene-AC00_RS07000;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AC00_RS07000;old_locus_tag=AC00_3749 NZ_JJLU01000108.1 Protein Homology CDS 16772 16951 . - 0 ID=cds-WP_001140433.1;Parent=gene-AC00_RS07000;Dbxref=GenBank:WP_001140433.1;Name=WP_001140433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=AC00_RS07000;product=50S ribosomal protein L30;protein_id=WP_001140433.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 16955 17458 . - . ID=gene-AC00_RS06995;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AC00_RS06995;old_locus_tag=AC00_3750 NZ_JJLU01000108.1 Protein Homology CDS 16955 17458 . - 0 ID=cds-WP_000940121.1;Parent=gene-AC00_RS06995;Dbxref=GenBank:WP_000940121.1;Name=WP_000940121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=AC00_RS06995;product=30S ribosomal protein S5;protein_id=WP_000940121.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 17473 17826 . - . ID=gene-AC00_RS06990;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AC00_RS06990;old_locus_tag=AC00_3751 NZ_JJLU01000108.1 Protein Homology CDS 17473 17826 . - 0 ID=cds-WP_000358960.1;Parent=gene-AC00_RS06990;Dbxref=GenBank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=AC00_RS06990;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 17836 18369 . - . ID=gene-AC00_RS06985;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AC00_RS06985;old_locus_tag=AC00_3752 NZ_JJLU01000108.1 Protein Homology CDS 17836 18369 . - 0 ID=cds-WP_000091945.1;Parent=gene-AC00_RS06985;Dbxref=GenBank:WP_000091945.1;Name=WP_000091945.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=AC00_RS06985;product=50S ribosomal protein L6;protein_id=WP_000091945.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 18382 18774 . - . ID=gene-AC00_RS06980;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AC00_RS06980;old_locus_tag=AC00_3753 NZ_JJLU01000108.1 Protein Homology CDS 18382 18774 . - 0 ID=cds-WP_000062611.1;Parent=gene-AC00_RS06980;Dbxref=GenBank:WP_000062611.1;Name=WP_000062611.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=AC00_RS06980;product=30S ribosomal protein S8;protein_id=WP_000062611.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 18808 19113 . - . ID=gene-AC00_RS06975;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AC00_RS06975;old_locus_tag=AC00_3754 NZ_JJLU01000108.1 Protein Homology CDS 18808 19113 . - 0 ID=cds-WP_001118930.1;Parent=gene-AC00_RS06975;Dbxref=GenBank:WP_001118930.1;Name=WP_001118930.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=AC00_RS06975;product=30S ribosomal protein S14;protein_id=WP_001118930.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 19128 19667 . - . ID=gene-AC00_RS06970;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AC00_RS06970;old_locus_tag=AC00_3755 NZ_JJLU01000108.1 Protein Homology CDS 19128 19667 . - 0 ID=cds-WP_001096200.1;Parent=gene-AC00_RS06970;Dbxref=GenBank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=AC00_RS06970;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 19682 19996 . - . ID=gene-AC00_RS06965;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AC00_RS06965;old_locus_tag=AC00_3756 NZ_JJLU01000108.1 Protein Homology CDS 19682 19996 . - 0 ID=cds-WP_000729185.1;Parent=gene-AC00_RS06965;Dbxref=GenBank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=AC00_RS06965;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 20007 20378 . - . ID=gene-AC00_RS06960;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AC00_RS06960;old_locus_tag=AC00_3757 NZ_JJLU01000108.1 Protein Homology CDS 20007 20378 . - 0 ID=cds-WP_000613955.1;Parent=gene-AC00_RS06960;Dbxref=GenBank:WP_000613955.1;Name=WP_000613955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AC00_RS06960;product=50S ribosomal protein L14;protein_id=WP_000613955.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 20543 20797 . - . ID=gene-AC00_RS06955;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AC00_RS06955;old_locus_tag=AC00_3758 NZ_JJLU01000108.1 Protein Homology CDS 20543 20797 . - 0 ID=cds-WP_000130100.1;Parent=gene-AC00_RS06955;Dbxref=GenBank:WP_000130100.1;Name=WP_000130100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=AC00_RS06955;product=30S ribosomal protein S17;protein_id=WP_000130100.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 20797 20988 . - . ID=gene-AC00_RS06950;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AC00_RS06950;old_locus_tag=AC00_3759 NZ_JJLU01000108.1 Protein Homology CDS 20797 20988 . - 0 ID=cds-WP_000644741.1;Parent=gene-AC00_RS06950;Dbxref=GenBank:WP_000644741.1;Name=WP_000644741.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=AC00_RS06950;product=50S ribosomal protein L29;protein_id=WP_000644741.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 20988 21398 . - . ID=gene-AC00_RS06945;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AC00_RS06945;old_locus_tag=AC00_3760 NZ_JJLU01000108.1 Protein Homology CDS 20988 21398 . - 0 ID=cds-WP_000941212.1;Parent=gene-AC00_RS06945;Dbxref=GenBank:WP_000941212.1;Name=WP_000941212.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AC00_RS06945;product=50S ribosomal protein L16;protein_id=WP_000941212.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 21411 22112 . - . ID=gene-AC00_RS06940;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AC00_RS06940;old_locus_tag=AC00_3761 NZ_JJLU01000108.1 Protein Homology CDS 21411 22112 . - 0 ID=cds-WP_000529945.1;Parent=gene-AC00_RS06940;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=AC00_RS06940;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 22130 22462 . - . ID=gene-AC00_RS06935;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AC00_RS06935;old_locus_tag=AC00_3762 NZ_JJLU01000108.1 Protein Homology CDS 22130 22462 . - 0 ID=cds-WP_000447529.1;Parent=gene-AC00_RS06935;Dbxref=GenBank:WP_000447529.1;Name=WP_000447529.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AC00_RS06935;product=50S ribosomal protein L22;protein_id=WP_000447529.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 22477 22755 . - . ID=gene-AC00_RS0125510;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AC00_RS0125510 NZ_JJLU01000108.1 Protein Homology CDS 22477 22755 . - 0 ID=cds-WP_001138117.1;Parent=gene-AC00_RS0125510;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=AC00_RS0125510;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 22772 23593 . - . ID=gene-AC00_RS06930;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AC00_RS06930;old_locus_tag=AC00_3764 NZ_JJLU01000108.1 Protein Homology CDS 22772 23593 . - 0 ID=cds-WP_000301864.1;Parent=gene-AC00_RS06930;Dbxref=GenBank:WP_000301864.1;Name=WP_000301864.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=AC00_RS06930;product=50S ribosomal protein L2;protein_id=WP_000301864.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 23611 23913 . - . ID=gene-AC00_RS06925;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AC00_RS06925;old_locus_tag=AC00_3765 NZ_JJLU01000108.1 Protein Homology CDS 23611 23913 . - 0 ID=cds-WP_000617544.1;Parent=gene-AC00_RS06925;Dbxref=GenBank:WP_000617544.1;Name=WP_000617544.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=AC00_RS06925;product=50S ribosomal protein L23;protein_id=WP_000617544.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 23910 24515 . - . ID=gene-AC00_RS06920;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AC00_RS06920;old_locus_tag=AC00_3766 NZ_JJLU01000108.1 Protein Homology CDS 23910 24515 . - 0 ID=cds-WP_000424395.1;Parent=gene-AC00_RS06920;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=AC00_RS06920;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 24526 25155 . - . ID=gene-AC00_RS06915;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AC00_RS06915;old_locus_tag=AC00_3767 NZ_JJLU01000108.1 Protein Homology CDS 24526 25155 . - 0 ID=cds-WP_000579833.1;Parent=gene-AC00_RS06915;Dbxref=GenBank:WP_000579833.1;Name=WP_000579833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=AC00_RS06915;product=50S ribosomal protein L3;protein_id=WP_000579833.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 25188 25499 . - . ID=gene-AC00_RS06910;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AC00_RS06910;old_locus_tag=AC00_3768 NZ_JJLU01000108.1 Protein Homology CDS 25188 25499 . - 0 ID=cds-WP_001181004.1;Parent=gene-AC00_RS06910;Dbxref=GenBank:WP_001181004.1;Name=WP_001181004.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AC00_RS06910;product=30S ribosomal protein S10;protein_id=WP_001181004.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 25878 26345 . + . ID=gene-AC00_RS0125520;Name=AC00_RS0125520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125520;old_locus_tag=AC00_3769 NZ_JJLU01000108.1 Protein Homology CDS 25878 26345 . + 0 ID=cds-WP_000381746.1;Parent=gene-AC00_RS0125520;Dbxref=GenBank:WP_000381746.1;Name=WP_000381746.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312215.1;locus_tag=AC00_RS0125520;product=prepilin peptidase;protein_id=WP_000381746.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 26342 26818 . - . ID=gene-AC00_RS06905;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=AC00_RS06905;old_locus_tag=AC00_3770 NZ_JJLU01000108.1 Protein Homology CDS 26342 26818 . - 0 ID=cds-WP_000675526.1;Parent=gene-AC00_RS06905;Dbxref=GenBank:WP_000675526.1;Name=WP_000675526.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709111.1;locus_tag=AC00_RS06905;product=bacterioferritin;protein_id=WP_000675526.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 26891 27085 . - . ID=gene-AC00_RS06900;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=AC00_RS06900;old_locus_tag=AC00_3771 NZ_JJLU01000108.1 Protein Homology CDS 26891 27085 . - 0 ID=cds-WP_000289090.1;Parent=gene-AC00_RS06900;Dbxref=GenBank:WP_000289090.1;Name=WP_000289090.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709112.1;locus_tag=AC00_RS06900;product=bacterioferritin-associated ferredoxin;protein_id=WP_000289090.1;transl_table=11 NZ_JJLU01000108.1 RefSeq gene 27268 27855 . - . ID=gene-AC00_RS06895;Name=AC00_RS06895;end_range=27855,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06895;old_locus_tag=AC00_3772;partial=true NZ_JJLU01000108.1 Protein Homology CDS 27268 27855 . - 0 ID=cds-WP_019842912.1;Parent=gene-AC00_RS06895;Dbxref=GenBank:WP_019842912.1;Name=WP_019842912.1;Ontology_term=GO:0005525;end_range=27855,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC00_RS06895;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_019842912.1;transl_table=11 ##sequence-region NZ_JJLU01000109.1 1 169633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000109.1 RefSeq region 1 169633 . + . ID=NZ_JJLU01000109.1:1..169633;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000109.1 RefSeq gene 1 593 . - . ID=gene-AC00_RS06890;Name=AC00_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06890;old_locus_tag=AC00_3773;partial=true;start_range=.,1 NZ_JJLU01000109.1 Protein Homology CDS 1 593 . - 0 ID=cds-WP_000031754.1;Parent=gene-AC00_RS06890;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC00_RS06890;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;start_range=.,1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 664 2778 . - . ID=gene-AC00_RS06885;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AC00_RS06885;old_locus_tag=AC00_3774 NZ_JJLU01000109.1 Protein Homology CDS 664 2778 . - 0 ID=cds-WP_000124700.1;Parent=gene-AC00_RS06885;Dbxref=GenBank:WP_000124700.1;Name=WP_000124700.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=AC00_RS06885;product=elongation factor G;protein_id=WP_000124700.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 2875 3345 . - . ID=gene-AC00_RS06880;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AC00_RS06880;old_locus_tag=AC00_3775 NZ_JJLU01000109.1 Protein Homology CDS 2875 3345 . - 0 ID=cds-WP_001138043.1;Parent=gene-AC00_RS06880;Dbxref=GenBank:WP_001138043.1;Name=WP_001138043.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=AC00_RS06880;product=30S ribosomal protein S7;protein_id=WP_001138043.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 3442 3816 . - . ID=gene-AC00_RS06875;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AC00_RS06875;old_locus_tag=AC00_3776 NZ_JJLU01000109.1 Protein Homology CDS 3442 3816 . - 0 ID=cds-WP_000246815.1;Parent=gene-AC00_RS06875;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=AC00_RS06875;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 3942 4229 . - . ID=gene-AC00_RS06870;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=AC00_RS06870;old_locus_tag=AC00_3777 NZ_JJLU01000109.1 Protein Homology CDS 3942 4229 . - 0 ID=cds-WP_000903377.1;Parent=gene-AC00_RS06870;Dbxref=GenBank:WP_000903377.1;Name=WP_000903377.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312221.1;locus_tag=AC00_RS06870;product=sulfurtransferase complex subunit TusB;protein_id=WP_000903377.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 4237 4596 . - . ID=gene-AC00_RS06865;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=AC00_RS06865;old_locus_tag=AC00_3778 NZ_JJLU01000109.1 Protein Homology CDS 4237 4596 . - 0 ID=cds-WP_000820736.1;Parent=gene-AC00_RS06865;Dbxref=GenBank:WP_000820736.1;Name=WP_000820736.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312222.1;locus_tag=AC00_RS06865;product=sulfurtransferase complex subunit TusC;protein_id=WP_000820736.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 4596 4982 . - . ID=gene-AC00_RS06860;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=AC00_RS06860;old_locus_tag=AC00_3779 NZ_JJLU01000109.1 Protein Homology CDS 4596 4982 . - 0 ID=cds-WP_001209705.1;Parent=gene-AC00_RS06860;Dbxref=GenBank:WP_001209705.1;Name=WP_001209705.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312223.1;locus_tag=AC00_RS06860;product=sulfurtransferase complex subunit TusD;protein_id=WP_001209705.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 4982 5704 . - . ID=gene-AC00_RS06855;Name=yheO;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=AC00_RS06855;old_locus_tag=AC00_3780 NZ_JJLU01000109.1 Protein Homology CDS 4982 5704 . - 0 ID=cds-WP_000091472.1;Parent=gene-AC00_RS06855;Dbxref=GenBank:WP_000091472.1;Name=WP_000091472.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;gene=yheO;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312224.2;locus_tag=AC00_RS06855;product=helix-turn-helix transcriptional regulator;protein_id=WP_000091472.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 5871 6683 . - . ID=gene-AC00_RS06850;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=AC00_RS06850;old_locus_tag=AC00_3781 NZ_JJLU01000109.1 Protein Homology CDS 5871 6683 . - 0 ID=cds-WP_000838261.1;Parent=gene-AC00_RS06850;Dbxref=GenBank:WP_000838261.1;Name=WP_000838261.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312225.1;locus_tag=AC00_RS06850;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000838261.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 6904 7122 . + . ID=gene-AC00_RS06845;Name=slyX;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=AC00_RS06845;old_locus_tag=AC00_3782 NZ_JJLU01000109.1 Protein Homology CDS 6904 7122 . + 0 ID=cds-WP_001153615.1;Parent=gene-AC00_RS06845;Dbxref=GenBank:WP_001153615.1;Name=WP_001153615.1;gbkey=CDS;gene=slyX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312226.1;locus_tag=AC00_RS06845;product=protein SlyX;protein_id=WP_001153615.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 7171 7761 . - . ID=gene-AC00_RS06840;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=AC00_RS06840;old_locus_tag=AC00_3783 NZ_JJLU01000109.1 Protein Homology CDS 7171 7761 . - 0 ID=cds-WP_000861334.1;Parent=gene-AC00_RS06840;Dbxref=GenBank:WP_000861334.1;Name=WP_000861334.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312227.1;locus_tag=AC00_RS06840;product=peptidylprolyl isomerase;protein_id=WP_000861334.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 7856 8056 . - . ID=gene-AC00_RS06835;Name=yheV;gbkey=Gene;gene=yheV;gene_biotype=protein_coding;locus_tag=AC00_RS06835;old_locus_tag=AC00_3784 NZ_JJLU01000109.1 Protein Homology CDS 7856 8056 . - 0 ID=cds-WP_001007730.1;Parent=gene-AC00_RS06835;Dbxref=GenBank:WP_001007730.1;Name=WP_001007730.1;gbkey=CDS;gene=yheV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=AC00_RS06835;product=YheV family putative zinc ribbon protein;protein_id=WP_001007730.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 8066 9871 . - . ID=gene-AC00_RS06830;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=AC00_RS06830;old_locus_tag=AC00_3785 NZ_JJLU01000109.1 Protein Homology CDS 8066 9871 . - 0 ID=cds-WP_000399122.1;Parent=gene-AC00_RS06830;Dbxref=GenBank:WP_000399122.1;Name=WP_000399122.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417809.1;locus_tag=AC00_RS06830;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_000399122.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 9871 10422 . - . ID=gene-AC00_RS06825;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=AC00_RS06825;old_locus_tag=AC00_3786 NZ_JJLU01000109.1 Protein Homology CDS 9871 10422 . - 0 ID=cds-WP_001297514.1;Parent=gene-AC00_RS06825;Dbxref=GenBank:WP_001297514.1;Name=WP_001297514.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312229.2;locus_tag=AC00_RS06825;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_001297514.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 10553 12466 . + . ID=gene-AC00_RS06820;Name=yheS;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=AC00_RS06820;old_locus_tag=AC00_3787 NZ_JJLU01000109.1 Protein Homology CDS 10553 12466 . + 0 ID=cds-WP_000634798.1;Parent=gene-AC00_RS06820;Dbxref=GenBank:WP_000634798.1;Name=WP_000634798.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yheS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312230.1;locus_tag=AC00_RS06820;product=ABC transporter ATP-binding protein;protein_id=WP_000634798.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 12466 13488 . + . ID=gene-AC00_RS06815;Name=yheT;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=AC00_RS06815;old_locus_tag=AC00_3788 NZ_JJLU01000109.1 Protein Homology CDS 12466 13488 . + 0 ID=cds-WP_032281693.1;Parent=gene-AC00_RS06815;Dbxref=GenBank:WP_032281693.1;Name=WP_032281693.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yheT;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312231.1;locus_tag=AC00_RS06815;product=hydrolase;protein_id=WP_032281693.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 13482 13700 . + . ID=gene-AC00_RS06810;Name=yheU;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=AC00_RS06810;old_locus_tag=AC00_3789 NZ_JJLU01000109.1 Protein Homology CDS 13482 13700 . + 0 ID=cds-WP_000907085.1;Parent=gene-AC00_RS06810;Dbxref=GenBank:WP_000907085.1;Name=WP_000907085.1;gbkey=CDS;gene=yheU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312232.1;locus_tag=AC00_RS06810;product=YheU family protein;protein_id=WP_000907085.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 13754 14623 . + . ID=gene-AC00_RS06805;Name=prkB;gbkey=Gene;gene=prkB;gene_biotype=protein_coding;locus_tag=AC00_RS06805;old_locus_tag=AC00_3790 NZ_JJLU01000109.1 Protein Homology CDS 13754 14623 . + 0 ID=cds-WP_001274680.1;Parent=gene-AC00_RS06805;Dbxref=GenBank:WP_001274680.1;Name=WP_001274680.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;gene=prkB;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417814.1;locus_tag=AC00_RS06805;product=phosphoribulokinase;protein_id=WP_001274680.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 14678 15082 . - . ID=gene-AC00_RS06800;Name=yhfA;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=AC00_RS06800;old_locus_tag=AC00_3791 NZ_JJLU01000109.1 Protein Homology CDS 14678 15082 . - 0 ID=cds-WP_001148908.1;Parent=gene-AC00_RS06800;Dbxref=GenBank:WP_001148908.1;Name=WP_001148908.1;gbkey=CDS;gene=yhfA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=AC00_RS06800;product=OsmC family protein;protein_id=WP_001148908.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 15384 16016 . + . ID=gene-AC00_RS06795;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=AC00_RS06795;old_locus_tag=AC00_3792 NZ_JJLU01000109.1 Protein Homology CDS 15384 16016 . + 0 ID=cds-WP_000242755.1;Parent=gene-AC00_RS06795;Dbxref=GenBank:WP_000242755.1;Name=WP_000242755.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312235.1;locus_tag=AC00_RS06795;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242755.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 16067 18157 . + . ID=gene-AC00_RS06790;Name=yhfK;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=AC00_RS06790;old_locus_tag=AC00_3793 NZ_JJLU01000109.1 Protein Homology CDS 16067 18157 . + 0 ID=cds-WP_001295162.1;Parent=gene-AC00_RS06790;Dbxref=GenBank:WP_001295162.1;Name=WP_001295162.1;gbkey=CDS;gene=yhfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312236.3;locus_tag=AC00_RS06790;product=YccS/YhfK family putative transporter;protein_id=WP_001295162.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 18224 19444 . - . ID=gene-AC00_RS06785;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=AC00_RS06785;old_locus_tag=AC00_3794 NZ_JJLU01000109.1 Protein Homology CDS 18224 19444 . - 0 ID=cds-WP_032281695.1;Parent=gene-AC00_RS06785;Dbxref=GenBank:WP_032281695.1;Name=WP_032281695.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312237.1;locus_tag=AC00_RS06785;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_032281695.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 19530 20093 . - . ID=gene-AC00_RS06780;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=AC00_RS06780;old_locus_tag=AC00_3795 NZ_JJLU01000109.1 Protein Homology CDS 19530 20093 . - 0 ID=cds-WP_000601857.1;Parent=gene-AC00_RS06780;Dbxref=GenBank:WP_000601857.1;Name=WP_000601857.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312238.1;locus_tag=AC00_RS06780;product=aminodeoxychorismate synthase component 2;protein_id=WP_000601857.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 20125 20727 . - . ID=gene-AC00_RS06775;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=AC00_RS06775;old_locus_tag=AC00_3796 NZ_JJLU01000109.1 Protein Homology CDS 20125 20727 . - 0 ID=cds-WP_001280641.1;Parent=gene-AC00_RS06775;Dbxref=GenBank:WP_001280641.1;Name=WP_001280641.1;gbkey=CDS;gene=fic;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417820.1;locus_tag=AC00_RS06775;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_001280641.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 20717 20884 . - . ID=gene-AC00_RS0125530;Name=yhfG;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=AC00_RS0125530 NZ_JJLU01000109.1 Protein Homology CDS 20717 20884 . - 0 ID=cds-WP_032281696.1;Parent=gene-AC00_RS0125530;Dbxref=GenBank:WP_032281696.1;Name=WP_032281696.1;gbkey=CDS;gene=yhfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709137.1;locus_tag=AC00_RS0125530;product=YhfG family protein;protein_id=WP_032281696.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 20989 21561 . - . ID=gene-AC00_RS06770;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=AC00_RS06770;old_locus_tag=AC00_3797 NZ_JJLU01000109.1 Protein Homology CDS 20989 21561 . - 0 ID=cds-WP_000477226.1;Parent=gene-AC00_RS06770;Dbxref=GenBank:WP_000477226.1;Name=WP_000477226.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312241.1;locus_tag=AC00_RS06770;product=peptidylprolyl isomerase A;protein_id=WP_000477226.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 21832 23013 . + . ID=gene-AC00_RS06765;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AC00_RS06765;old_locus_tag=AC00_3799 NZ_JJLU01000109.1 Protein Homology CDS 21832 23013 . + 0 ID=cds-WP_000185243.1;Parent=gene-AC00_RS06765;Dbxref=GenBank:WP_000185243.1;Name=WP_000185243.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312242.1;locus_tag=AC00_RS06765;product=MFS transporter TsgA;protein_id=WP_000185243.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 23276 25819 . + . ID=gene-AC00_RS06760;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=AC00_RS06760;old_locus_tag=AC00_3801 NZ_JJLU01000109.1 Protein Homology CDS 23276 25819 . + 0 ID=cds-WP_032281697.1;Parent=gene-AC00_RS06760;Dbxref=GenBank:WP_032281697.1;Name=WP_032281697.1;gbkey=CDS;gene=nirB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709140.2;locus_tag=AC00_RS06760;product=NADPH-nitrite reductase large subunit;protein_id=WP_032281697.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 25816 26142 . + . ID=gene-AC00_RS06755;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=AC00_RS06755;old_locus_tag=AC00_3802 NZ_JJLU01000109.1 Protein Homology CDS 25816 26142 . + 0 ID=cds-WP_000084764.1;Parent=gene-AC00_RS06755;Dbxref=GenBank:WP_000084764.1;Name=WP_000084764.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312244.1;locus_tag=AC00_RS06755;product=nitrite reductase small subunit NirD;protein_id=WP_000084764.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 26268 27074 . + . ID=gene-AC00_RS06750;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=AC00_RS06750;old_locus_tag=AC00_3803 NZ_JJLU01000109.1 Protein Homology CDS 26268 27074 . + 0 ID=cds-WP_032281698.1;Parent=gene-AC00_RS06750;Dbxref=GenBank:WP_032281698.1;Name=WP_032281698.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=nirC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312245.2;locus_tag=AC00_RS06750;product=nitrite transporter NirC;protein_id=WP_032281698.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 27093 28466 . + . ID=gene-AC00_RS06745;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=AC00_RS06745;old_locus_tag=AC00_3804 NZ_JJLU01000109.1 Protein Homology CDS 27093 28466 . + 0 ID=cds-WP_032281699.1;Parent=gene-AC00_RS06745;Dbxref=GenBank:WP_032281699.1;Name=WP_032281699.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312246.1;locus_tag=AC00_RS06745;product=siroheme synthase CysG;protein_id=WP_032281699.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 28721 28888 . + . ID=gene-AC00_RS06740;Name=yhfL;gbkey=Gene;gene=yhfL;gene_biotype=protein_coding;locus_tag=AC00_RS06740;old_locus_tag=AC00_3805 NZ_JJLU01000109.1 Protein Homology CDS 28721 28888 . + 0 ID=cds-WP_001031834.1;Parent=gene-AC00_RS06740;Dbxref=GenBank:WP_001031834.1;Name=WP_001031834.1;gbkey=CDS;gene=yhfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312247.1;locus_tag=AC00_RS06740;product=YhfL family protein;protein_id=WP_001031834.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 28995 30080 . - . ID=gene-AC00_RS06735;Name=yhfS;gbkey=Gene;gene=yhfS;gene_biotype=protein_coding;locus_tag=AC00_RS06735;old_locus_tag=AC00_3806 NZ_JJLU01000109.1 Protein Homology CDS 28995 30080 . - 0 ID=cds-WP_032281700.1;Parent=gene-AC00_RS06735;Dbxref=GenBank:WP_032281700.1;Name=WP_032281700.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;gene=yhfS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709149.1;locus_tag=AC00_RS06735;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_032281700.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 30092 31396 . - . ID=gene-AC00_RS06730;Name=yhfT;gbkey=Gene;gene=yhfT;gene_biotype=protein_coding;locus_tag=AC00_RS06730;old_locus_tag=AC00_3807 NZ_JJLU01000109.1 Protein Homology CDS 30092 31396 . - 0 ID=cds-WP_000366876.1;Parent=gene-AC00_RS06730;Dbxref=GenBank:WP_000366876.1;Name=WP_000366876.1;gbkey=CDS;gene=yhfT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709150.1;locus_tag=AC00_RS06730;product=YhfT family protein;protein_id=WP_000366876.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 31408 31761 . - . ID=gene-AC00_RS06725;Name=yhfU;gbkey=Gene;gene=yhfU;gene_biotype=protein_coding;locus_tag=AC00_RS06725;old_locus_tag=AC00_3808 NZ_JJLU01000109.1 Protein Homology CDS 31408 31761 . - 0 ID=cds-WP_000719728.1;Parent=gene-AC00_RS06725;Dbxref=GenBank:WP_000719728.1;Name=WP_000719728.1;gbkey=CDS;gene=yhfU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417837.2;locus_tag=AC00_RS06725;product=DUF2620 domain-containing protein;protein_id=WP_000719728.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 31772 32650 . - . ID=gene-AC00_RS06720;Name=php;gbkey=Gene;gene=php;gene_biotype=protein_coding;locus_tag=AC00_RS06720;old_locus_tag=AC00_3809 NZ_JJLU01000109.1 Protein Homology CDS 31772 32650 . - 0 ID=cds-WP_028132032.1;Parent=gene-AC00_RS06720;Dbxref=GenBank:WP_028132032.1;Name=WP_028132032.1;gbkey=CDS;gene=php;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417838.1;locus_tag=AC00_RS06720;product=phosphotriesterase-related protein;protein_id=WP_028132032.1;transl_table=11 NZ_JJLU01000109.1 RefSeq pseudogene 32647 33873 . - . ID=gene-AC00_RS0125535;Name=yhfW;gbkey=Gene;gene=yhfW;gene_biotype=pseudogene;locus_tag=AC00_RS0125535;pseudo=true NZ_JJLU01000109.1 Protein Homology CDS 32647 33873 . - 0 ID=cds-AC00_RS0125535;Parent=gene-AC00_RS0125535;Note=internal stop;Ontology_term=GO:0008973;gbkey=CDS;gene=yhfW;go_function=phosphopentomutase activity|0008973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709153.1;locus_tag=AC00_RS0125535;product=phosphopentomutase;pseudo=true;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 33873 35036 . - . ID=gene-AC00_RS06715;Name=yhfX;gbkey=Gene;gene=yhfX;gene_biotype=protein_coding;locus_tag=AC00_RS06715;old_locus_tag=AC00_3812 NZ_JJLU01000109.1 Protein Homology CDS 33873 35036 . - 0 ID=cds-WP_032281704.1;Parent=gene-AC00_RS06715;Dbxref=GenBank:WP_032281704.1;Name=WP_032281704.1;gbkey=CDS;gene=yhfX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709154.1;locus_tag=AC00_RS06715;product=YhfX family PLP-dependent enzyme;protein_id=WP_032281704.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 35120 35482 . - . ID=gene-AC00_RS06710;Name=yhfY;gbkey=Gene;gene=yhfY;gene_biotype=protein_coding;locus_tag=AC00_RS06710;old_locus_tag=AC00_3813 NZ_JJLU01000109.1 Protein Homology CDS 35120 35482 . - 0 ID=cds-WP_032281705.1;Parent=gene-AC00_RS06710;Dbxref=GenBank:WP_032281705.1;Name=WP_032281705.1;gbkey=CDS;gene=yhfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417841.2;locus_tag=AC00_RS06710;product=hypothetical protein;protein_id=WP_032281705.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 35499 36404 . - . ID=gene-AC00_RS06705;Name=yhfZ;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=AC00_RS06705;old_locus_tag=AC00_3814 NZ_JJLU01000109.1 Protein Homology CDS 35499 36404 . - 0 ID=cds-WP_001254820.1;Parent=gene-AC00_RS06705;Dbxref=GenBank:WP_001254820.1;Name=WP_001254820.1;gbkey=CDS;gene=yhfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026214.1;locus_tag=AC00_RS06705;product=GntR family transcriptional regulator YhfZ;protein_id=WP_001254820.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 36563 37567 . - . ID=gene-AC00_RS06700;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AC00_RS06700;old_locus_tag=AC00_3816 NZ_JJLU01000109.1 Protein Homology CDS 36563 37567 . - 0 ID=cds-WP_000165543.1;Parent=gene-AC00_RS06700;Dbxref=GenBank:WP_000165543.1;Name=WP_000165543.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312253.1;locus_tag=AC00_RS06700;product=tryptophan--tRNA ligase;protein_id=WP_000165543.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 37560 38318 . - . ID=gene-AC00_RS06695;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=AC00_RS06695;old_locus_tag=AC00_3817 NZ_JJLU01000109.1 Protein Homology CDS 37560 38318 . - 0 ID=cds-WP_000032691.1;Parent=gene-AC00_RS06695;Dbxref=GenBank:WP_000032691.1;Name=WP_000032691.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312254.1;locus_tag=AC00_RS06695;product=phosphoglycolate phosphatase;protein_id=WP_000032691.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 38311 38988 . - . ID=gene-AC00_RS06690;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AC00_RS06690;old_locus_tag=AC00_3818 NZ_JJLU01000109.1 Protein Homology CDS 38311 38988 . - 0 ID=cds-WP_000816280.1;Parent=gene-AC00_RS06690;Dbxref=GenBank:WP_000816280.1;Name=WP_000816280.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312255.1;locus_tag=AC00_RS06690;product=ribulose-phosphate 3-epimerase;protein_id=WP_000816280.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 39006 39842 . - . ID=gene-AC00_RS06685;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=AC00_RS06685;old_locus_tag=AC00_3819 NZ_JJLU01000109.1 Protein Homology CDS 39006 39842 . - 0 ID=cds-WP_000742141.1;Parent=gene-AC00_RS06685;Dbxref=GenBank:WP_000742141.1;Name=WP_000742141.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312256.1;locus_tag=AC00_RS06685;product=adenine-specific DNA-methyltransferase;protein_id=WP_000742141.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 39949 41235 . - . ID=gene-AC00_RS06680;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=AC00_RS06680;old_locus_tag=AC00_3820 NZ_JJLU01000109.1 Protein Homology CDS 39949 41235 . - 0 ID=cds-WP_032288297.1;Parent=gene-AC00_RS06680;Dbxref=GenBank:WP_032288297.1;Name=WP_032288297.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312257.1;locus_tag=AC00_RS06680;product=cell division protein DamX;protein_id=WP_032288297.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 41327 42415 . - . ID=gene-AC00_RS06675;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AC00_RS06675;old_locus_tag=AC00_3821 NZ_JJLU01000109.1 Protein Homology CDS 41327 42415 . - 0 ID=cds-WP_000439850.1;Parent=gene-AC00_RS06675;Dbxref=GenBank:WP_000439850.1;Name=WP_000439850.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312258.1;locus_tag=AC00_RS06675;product=3-dehydroquinate synthase;protein_id=WP_000439850.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 42472 42993 . - . ID=gene-AC00_RS06670;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AC00_RS06670;old_locus_tag=AC00_3822 NZ_JJLU01000109.1 Protein Homology CDS 42472 42993 . - 0 ID=cds-WP_000818618.1;Parent=gene-AC00_RS06670;Dbxref=GenBank:WP_000818618.1;Name=WP_000818618.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=AC00_RS06670;product=shikimate kinase AroK;protein_id=WP_000818618.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 43394 44632 . - . ID=gene-AC00_RS06665;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=AC00_RS06665;old_locus_tag=AC00_3823 NZ_JJLU01000109.1 Protein Homology CDS 43394 44632 . - 0 ID=cds-WP_000815972.1;Parent=gene-AC00_RS06665;Dbxref=GenBank:WP_000815972.1;Name=WP_000815972.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417850.1;locus_tag=AC00_RS06665;product=DNA uptake porin HofQ;protein_id=WP_000815972.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 44544 44948 . - . ID=gene-AC00_RS06660;Name=hofP;gbkey=Gene;gene=hofP;gene_biotype=protein_coding;locus_tag=AC00_RS06660;old_locus_tag=AC00_3824 NZ_JJLU01000109.1 Protein Homology CDS 44544 44948 . - 0 ID=cds-WP_001264141.1;Parent=gene-AC00_RS06660;Dbxref=GenBank:WP_001264141.1;Name=WP_001264141.1;gbkey=CDS;gene=hofP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417851.4;locus_tag=AC00_RS06660;product=DNA utilization protein HofP;protein_id=WP_001264141.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 44938 45378 . - . ID=gene-AC00_RS06655;Name=hofO;gbkey=Gene;gene=hofO;gene_biotype=protein_coding;locus_tag=AC00_RS06655;old_locus_tag=AC00_3825 NZ_JJLU01000109.1 Protein Homology CDS 44938 45378 . - 0 ID=cds-WP_032281706.1;Parent=gene-AC00_RS06655;Dbxref=GenBank:WP_032281706.1;Name=WP_032281706.1;gbkey=CDS;gene=hofO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417852.1;locus_tag=AC00_RS06655;product=DNA utilization protein HofO;protein_id=WP_032281706.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 45362 45901 . - . ID=gene-AC00_RS06650;Name=hofN;gbkey=Gene;gene=hofN;gene_biotype=protein_coding;locus_tag=AC00_RS06650;old_locus_tag=AC00_3826 NZ_JJLU01000109.1 Protein Homology CDS 45362 45901 . - 0 ID=cds-WP_032281707.1;Parent=gene-AC00_RS06650;Dbxref=GenBank:WP_032281707.1;Name=WP_032281707.1;gbkey=CDS;gene=hofN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312263.1;locus_tag=AC00_RS06650;product=DNA utilization protein HofN;protein_id=WP_032281707.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 45901 46680 . - . ID=gene-AC00_RS06645;Name=hofM;gbkey=Gene;gene=hofM;gene_biotype=protein_coding;locus_tag=AC00_RS06645;old_locus_tag=AC00_3827 NZ_JJLU01000109.1 Protein Homology CDS 45901 46680 . - 0 ID=cds-WP_032281708.1;Parent=gene-AC00_RS06645;Dbxref=GenBank:WP_032281708.1;Name=WP_032281708.1;gbkey=CDS;gene=hofM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417854.4;locus_tag=AC00_RS06645;product=DNA utilization protein HofM;protein_id=WP_032281708.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 46800 49352 . + . ID=gene-AC00_RS06640;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=AC00_RS06640;old_locus_tag=AC00_3828 NZ_JJLU01000109.1 Protein Homology CDS 46800 49352 . + 0 ID=cds-WP_032281709.1;Parent=gene-AC00_RS06640;Dbxref=GenBank:WP_032281709.1;Name=WP_032281709.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=AC00_RS06640;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_032281709.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 49517 50077 . - . ID=gene-AC00_RS06635;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=AC00_RS06635;old_locus_tag=AC00_3829 NZ_JJLU01000109.1 Protein Homology CDS 49517 50077 . - 0 ID=cds-WP_000045739.1;Parent=gene-AC00_RS06635;Dbxref=GenBank:WP_000045739.1;Name=WP_000045739.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312266.1;locus_tag=AC00_RS06635;product=ADP compounds hydrolase NudE;protein_id=WP_000045739.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 50397 52532 . + . ID=gene-AC00_RS06630;Name=igaA;gbkey=Gene;gene=igaA;gene_biotype=protein_coding;locus_tag=AC00_RS06630;old_locus_tag=AC00_3831 NZ_JJLU01000109.1 Protein Homology CDS 50397 52532 . + 0 ID=cds-WP_000104522.1;Parent=gene-AC00_RS06630;Dbxref=GenBank:WP_000104522.1;Name=WP_000104522.1;gbkey=CDS;gene=igaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417857.1;locus_tag=AC00_RS06630;product=intracellular growth attenuator protein IgaA;protein_id=WP_000104522.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 52597 53265 . + . ID=gene-AC00_RS06625;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=AC00_RS06625;old_locus_tag=AC00_3832 NZ_JJLU01000109.1 Protein Homology CDS 52597 53265 . + 0 ID=cds-WP_001295168.1;Parent=gene-AC00_RS06625;Dbxref=GenBank:WP_001295168.1;Name=WP_001295168.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312268.2;locus_tag=AC00_RS06625;product=GMP/IMP nucleotidase;protein_id=WP_001295168.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 53276 53677 . + . ID=gene-AC00_RS06620;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=AC00_RS06620;old_locus_tag=AC00_3833 NZ_JJLU01000109.1 Protein Homology CDS 53276 53677 . + 0 ID=cds-WP_000660483.1;Parent=gene-AC00_RS06620;Dbxref=GenBank:WP_000660483.1;Name=WP_000660483.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=AC00_RS06620;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_000660483.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 53702 54580 . + . ID=gene-AC00_RS06615;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AC00_RS06615;old_locus_tag=AC00_3834 NZ_JJLU01000109.1 Protein Homology CDS 53702 54580 . + 0 ID=cds-WP_001135574.1;Parent=gene-AC00_RS06615;Dbxref=GenBank:WP_001135574.1;Name=WP_001135574.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417860.2;locus_tag=AC00_RS06615;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001135574.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 54643 56367 . - . ID=gene-AC00_RS06610;Name=yhgE;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=AC00_RS06610;old_locus_tag=AC00_3835 NZ_JJLU01000109.1 Protein Homology CDS 54643 56367 . - 0 ID=cds-WP_032281712.1;Parent=gene-AC00_RS06610;Dbxref=GenBank:WP_032281712.1;Name=WP_032281712.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yhgE;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312271.1;locus_tag=AC00_RS06610;product=DUF4153 domain-containing protein;protein_id=WP_032281712.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 56746 58368 . + . ID=gene-AC00_RS06605;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=AC00_RS06605;old_locus_tag=AC00_3837 NZ_JJLU01000109.1 Protein Homology CDS 56746 58368 . + 0 ID=cds-WP_032261894.1;Parent=gene-AC00_RS06605;Dbxref=GenBank:WP_032261894.1;Name=WP_032261894.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312272.1;locus_tag=AC00_RS06605;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_032261894.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 58444 59796 . - . ID=gene-AC00_RS06600;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=AC00_RS06600;old_locus_tag=AC00_3838 NZ_JJLU01000109.1 Protein Homology CDS 58444 59796 . - 0 ID=cds-WP_032281713.1;Parent=gene-AC00_RS06600;Dbxref=GenBank:WP_032281713.1;Name=WP_032281713.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417863.1;locus_tag=AC00_RS06600;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_032281713.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 59793 60512 . - . ID=gene-AC00_RS06595;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=AC00_RS06595;old_locus_tag=AC00_3839 NZ_JJLU01000109.1 Protein Homology CDS 59793 60512 . - 0 ID=cds-WP_001157751.1;Parent=gene-AC00_RS06595;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=AC00_RS06595;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 60740 61216 . + . ID=gene-AC00_RS06590;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=AC00_RS06590;old_locus_tag=AC00_3840 NZ_JJLU01000109.1 Protein Homology CDS 60740 61216 . + 0 ID=cds-WP_000856744.1;Parent=gene-AC00_RS06590;Dbxref=GenBank:WP_000856744.1;Name=WP_000856744.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312275.2;locus_tag=AC00_RS06590;product=transcription elongation factor GreB;protein_id=WP_000856744.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 61313 63634 . + . ID=gene-AC00_RS06585;Name=yhgF;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=AC00_RS06585;old_locus_tag=AC00_3841 NZ_JJLU01000109.1 Protein Homology CDS 61313 63634 . + 0 ID=cds-WP_032288298.1;Parent=gene-AC00_RS06585;Dbxref=GenBank:WP_032288298.1;Name=WP_032288298.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;gene=yhgF;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312276.2;locus_tag=AC00_RS06585;product=Tex family protein;protein_id=WP_032288298.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 64072 64299 . + . ID=gene-AC00_RS06580;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=AC00_RS06580;old_locus_tag=AC00_3843 NZ_JJLU01000109.1 Protein Homology CDS 64072 64299 . + 0 ID=cds-WP_001200455.1;Parent=gene-AC00_RS06580;Dbxref=GenBank:WP_001200455.1;Name=WP_001200455.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312277.1;locus_tag=AC00_RS06580;product=ferrous iron transporter A;protein_id=WP_001200455.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 64316 66637 . + . ID=gene-AC00_RS06575;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AC00_RS06575;old_locus_tag=AC00_3844 NZ_JJLU01000109.1 Protein Homology CDS 64316 66637 . + 0 ID=cds-WP_032288299.1;Parent=gene-AC00_RS06575;Dbxref=GenBank:WP_032288299.1;Name=WP_032288299.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312278.2;locus_tag=AC00_RS06575;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_032288299.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 66637 66873 . + . ID=gene-AC00_RS06570;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=AC00_RS06570;old_locus_tag=AC00_3845 NZ_JJLU01000109.1 Protein Homology CDS 66637 66873 . + 0 ID=cds-WP_000157586.1;Parent=gene-AC00_RS06570;Dbxref=GenBank:WP_000157586.1;Name=WP_000157586.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=AC00_RS06570;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_000157586.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 67076 67954 . + . ID=gene-AC00_RS06565;Name=rpnA;gbkey=Gene;gene=rpnA;gene_biotype=protein_coding;locus_tag=AC00_RS06565;old_locus_tag=AC00_3846 NZ_JJLU01000109.1 Protein Homology CDS 67076 67954 . + 0 ID=cds-WP_032281716.1;Parent=gene-AC00_RS06565;Dbxref=GenBank:WP_032281716.1;Name=WP_032281716.1;gbkey=CDS;gene=rpnA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312280.1;locus_tag=AC00_RS06565;product=recombination-promoting nuclease RpnA;protein_id=WP_032281716.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 67981 68751 . - . ID=gene-AC00_RS06560;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=AC00_RS06560;old_locus_tag=AC00_3847 NZ_JJLU01000109.1 Protein Homology CDS 67981 68751 . - 0 ID=cds-WP_032281717.1;Parent=gene-AC00_RS06560;Dbxref=GenBank:WP_032281717.1;Name=WP_032281717.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312282.3;locus_tag=AC00_RS06560;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_032281717.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 68789 69472 . + . ID=gene-AC00_RS06555;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=AC00_RS06555;old_locus_tag=AC00_3848 NZ_JJLU01000109.1 Protein Homology CDS 68789 69472 . + 0 ID=cds-WP_032281718.1;Parent=gene-AC00_RS06555;Dbxref=GenBank:WP_032281718.1;Name=WP_032281718.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417872.2;locus_tag=AC00_RS06555;product=DNA utilization protein GntX;protein_id=WP_032281718.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 69531 70106 . + . ID=gene-AC00_RS06550;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=AC00_RS06550;old_locus_tag=AC00_3849 NZ_JJLU01000109.1 Protein Homology CDS 69531 70106 . + 0 ID=cds-WP_000619389.1;Parent=gene-AC00_RS06550;Dbxref=GenBank:WP_000619389.1;Name=WP_000619389.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=AC00_RS06550;product=Fe-S biogenesis protein NfuA;protein_id=WP_000619389.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 70467 71783 . + . ID=gene-AC00_RS06545;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=AC00_RS06545;old_locus_tag=AC00_3850 NZ_JJLU01000109.1 Protein Homology CDS 70467 71783 . + 0 ID=cds-WP_001131758.1;Parent=gene-AC00_RS06545;Dbxref=GenBank:WP_001131758.1;Name=WP_001131758.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312284.1;locus_tag=AC00_RS06545;product=gluconate transporter;protein_id=WP_001131758.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 71828 73912 . - . ID=gene-AC00_RS06540;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=AC00_RS06540;old_locus_tag=AC00_3851 NZ_JJLU01000109.1 Protein Homology CDS 71828 73912 . - 0 ID=cds-WP_000444362.1;Parent=gene-AC00_RS06540;Dbxref=GenBank:WP_000444362.1;Name=WP_000444362.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312285.1;locus_tag=AC00_RS06540;product=4-alpha-glucanotransferase;protein_id=WP_000444362.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 73922 76315 . - . ID=gene-AC00_RS06535;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=AC00_RS06535;old_locus_tag=AC00_3852 NZ_JJLU01000109.1 Protein Homology CDS 73922 76315 . - 0 ID=cds-WP_000081903.1;Parent=gene-AC00_RS06535;Dbxref=GenBank:WP_000081903.1;Name=WP_000081903.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312286.1;locus_tag=AC00_RS06535;product=maltodextrin phosphorylase;protein_id=WP_000081903.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 76927 79632 . + . ID=gene-AC00_RS06530;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=AC00_RS06530;old_locus_tag=AC00_3853 NZ_JJLU01000109.1 Protein Homology CDS 76927 79632 . + 0 ID=cds-WP_000906970.1;Parent=gene-AC00_RS06530;Dbxref=GenBank:WP_000906970.1;Name=WP_000906970.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312287.1;locus_tag=AC00_RS06530;product=HTH-type transcriptional regulator MalT;protein_id=WP_000906970.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 79699 79977 . + . ID=gene-AC00_RS06525;Name=AC00_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06525;old_locus_tag=AC00_3854 NZ_JJLU01000109.1 Protein Homology CDS 79699 79977 . + 0 ID=cds-WP_000801912.1;Parent=gene-AC00_RS06525;Dbxref=GenBank:WP_000801912.1;Name=WP_000801912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312288.2;locus_tag=AC00_RS06525;product=DUF1778 domain-containing protein;protein_id=WP_000801912.1;transl_table=11 NZ_JJLU01000109.1 RefSeq pseudogene 79968 80453 . + . ID=gene-AC00_RS0125545;Name=AC00_RS0125545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125545;pseudo=true NZ_JJLU01000109.1 Protein Homology CDS 79968 80453 . + 0 ID=cds-AC00_RS0125545;Parent=gene-AC00_RS0125545;Note=internal stop;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312289.1;locus_tag=AC00_RS0125545;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 80503 81531 . - . ID=gene-AC00_RS06520;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=protein_coding;locus_tag=AC00_RS06520;old_locus_tag=AC00_3856 NZ_JJLU01000109.1 Protein Homology CDS 80503 81531 . - 0 ID=cds-WP_032281719.1;Parent=gene-AC00_RS06520;Dbxref=GenBank:WP_032281719.1;Name=WP_032281719.1;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312290.2;locus_tag=AC00_RS06520;product=RNA 3'-terminal phosphate cyclase;protein_id=WP_032281719.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 81535 82761 . - . ID=gene-AC00_RS06515;Name=rtcB;gbkey=Gene;gene=rtcB;gene_biotype=protein_coding;locus_tag=AC00_RS06515;old_locus_tag=AC00_3857 NZ_JJLU01000109.1 Protein Homology CDS 81535 82761 . - 0 ID=cds-WP_001105466.1;Parent=gene-AC00_RS06515;Dbxref=GenBank:WP_001105466.1;Name=WP_001105466.1;gbkey=CDS;gene=rtcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417879.1;locus_tag=AC00_RS06515;product=RNA-splicing ligase RtcB;protein_id=WP_001105466.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 82948 84546 . + . ID=gene-AC00_RS06510;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=AC00_RS06510;old_locus_tag=AC00_3858 NZ_JJLU01000109.1 Protein Homology CDS 82948 84546 . + 0 ID=cds-WP_032281720.1;Parent=gene-AC00_RS06510;Dbxref=GenBank:WP_032281720.1;Name=WP_032281720.1;gbkey=CDS;gene=rtcR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312292.1;locus_tag=AC00_RS06510;product=DNA-binding transcriptional regulator RtcR;protein_id=WP_032281720.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 84528 85286 . - . ID=gene-AC00_RS06505;Name=AC00_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06505;old_locus_tag=AC00_3859 NZ_JJLU01000109.1 Protein Homology CDS 84528 85286 . - 0 ID=cds-WP_000815099.1;Parent=gene-AC00_RS06505;Dbxref=GenBank:WP_000815099.1;Name=WP_000815099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=AC00_RS06505;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_000815099.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 85303 86133 . - . ID=gene-AC00_RS06500;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=AC00_RS06500;old_locus_tag=AC00_3860 NZ_JJLU01000109.1 Protein Homology CDS 85303 86133 . - 0 ID=cds-WP_032281721.1;Parent=gene-AC00_RS06500;Dbxref=GenBank:WP_032281721.1;Name=WP_032281721.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312294.1;locus_tag=AC00_RS06500;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_032281721.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 86178 86504 . - . ID=gene-AC00_RS06495;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=AC00_RS06495;old_locus_tag=AC00_3861 NZ_JJLU01000109.1 Protein Homology CDS 86178 86504 . - 0 ID=cds-WP_000371928.1;Parent=gene-AC00_RS06495;Dbxref=GenBank:WP_000371928.1;Name=WP_000371928.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417883.1;locus_tag=AC00_RS06495;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_000371928.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 86694 88199 . + . ID=gene-AC00_RS06490;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=AC00_RS06490;old_locus_tag=AC00_3862 NZ_JJLU01000109.1 Protein Homology CDS 86694 88199 . + 0 ID=cds-WP_032288300.1;Parent=gene-AC00_RS06490;Dbxref=GenBank:WP_032288300.1;Name=WP_032288300.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312296.1;locus_tag=AC00_RS06490;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_032288300.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 88413 89015 . - . ID=gene-AC00_RS06485;Name=AC00_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06485;old_locus_tag=AC00_3863 NZ_JJLU01000109.1 Protein Homology CDS 88413 89015 . - 0 ID=cds-WP_122998982.1;Parent=gene-AC00_RS06485;Dbxref=GenBank:WP_122998982.1;Name=WP_122998982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312297.2;locus_tag=AC00_RS06485;product=hypothetical protein;protein_id=WP_122998982.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 89015 90007 . - . ID=gene-AC00_RS06480;Name=AC00_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06480;old_locus_tag=AC00_3864 NZ_JJLU01000109.1 Protein Homology CDS 89015 90007 . - 0 ID=cds-WP_032288302.1;Parent=gene-AC00_RS06480;Dbxref=GenBank:WP_032288302.1;Name=WP_032288302.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312298.1;locus_tag=AC00_RS06480;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_032288302.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 90033 91541 . - . ID=gene-AC00_RS06475;Name=AC00_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06475;old_locus_tag=AC00_3865 NZ_JJLU01000109.1 Protein Homology CDS 90033 91541 . - 0 ID=cds-WP_136747862.1;Parent=gene-AC00_RS06475;Dbxref=GenBank:WP_136747862.1;Name=WP_136747862.1;Ontology_term=GO:0006817,GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312299.2;locus_tag=AC00_RS06475;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_136747862.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 91666 94113 . - . ID=gene-AC00_RS06470;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=AC00_RS06470;old_locus_tag=AC00_3866 NZ_JJLU01000109.1 Protein Homology CDS 91666 94113 . - 0 ID=cds-WP_000993449.1;Parent=gene-AC00_RS06470;Dbxref=GenBank:WP_000993449.1;Name=WP_000993449.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417886.1;locus_tag=AC00_RS06470;product=glycogen phosphorylase;protein_id=WP_000993449.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 94132 95565 . - . ID=gene-AC00_RS06465;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AC00_RS06465;old_locus_tag=AC00_3867 NZ_JJLU01000109.1 Protein Homology CDS 94132 95565 . - 0 ID=cds-WP_001197646.1;Parent=gene-AC00_RS06465;Dbxref=GenBank:WP_001197646.1;Name=WP_001197646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312301.1;locus_tag=AC00_RS06465;product=glycogen synthase GlgA;protein_id=WP_001197646.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 95565 96860 . - . ID=gene-AC00_RS06460;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AC00_RS06460;old_locus_tag=AC00_3868 NZ_JJLU01000109.1 Protein Homology CDS 95565 96860 . - 0 ID=cds-WP_000253975.1;Parent=gene-AC00_RS06460;Dbxref=GenBank:WP_000253975.1;Name=WP_000253975.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312302.1;locus_tag=AC00_RS06460;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_000253975.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 96878 98851 . - . ID=gene-AC00_RS06455;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=AC00_RS06455;old_locus_tag=AC00_3869 NZ_JJLU01000109.1 Protein Homology CDS 96878 98851 . - 0 ID=cds-WP_000192539.1;Parent=gene-AC00_RS06455;Dbxref=GenBank:WP_000192539.1;Name=WP_000192539.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312303.1;locus_tag=AC00_RS06455;product=glycogen debranching protein GlgX;protein_id=WP_000192539.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 98848 101034 . - . ID=gene-AC00_RS06450;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=AC00_RS06450;old_locus_tag=AC00_3870 NZ_JJLU01000109.1 Protein Homology CDS 98848 101034 . - 0 ID=cds-WP_001283701.1;Parent=gene-AC00_RS06450;Dbxref=GenBank:WP_001283701.1;Name=WP_001283701.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312304.1;locus_tag=AC00_RS06450;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_001283701.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 101307 102410 . - . ID=gene-AC00_RS06445;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AC00_RS06445;old_locus_tag=AC00_3871 NZ_JJLU01000109.1 Protein Homology CDS 101307 102410 . - 0 ID=cds-WP_000799956.1;Parent=gene-AC00_RS06445;Dbxref=GenBank:WP_000799956.1;Name=WP_000799956.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312305.1;locus_tag=AC00_RS06445;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_000799956.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 102602 103195 . + . ID=gene-AC00_RS06440;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=AC00_RS06440;old_locus_tag=AC00_3872 NZ_JJLU01000109.1 Protein Homology CDS 102602 103195 . + 0 ID=cds-WP_001002544.1;Parent=gene-AC00_RS06440;Dbxref=GenBank:WP_001002544.1;Name=WP_001002544.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=AC00_RS06440;product=NAAT family transporter YhgN;protein_id=WP_001002544.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 103241 104536 . - . ID=gene-AC00_RS06435;Name=AC00_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06435;old_locus_tag=AC00_3873 NZ_JJLU01000109.1 Protein Homology CDS 103241 104536 . - 0 ID=cds-WP_148725567.1;Parent=gene-AC00_RS06435;Dbxref=GenBank:WP_148725567.1;Name=WP_148725567.1;Ontology_term=GO:0009294;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312307.2;locus_tag=AC00_RS06435;product=DNA-processing protein DprA;protein_id=WP_148725567.1;transl_table=11 NZ_JJLU01000109.1 RefSeq pseudogene 104443 106550 . - . ID=gene-AC00_RS26650;Name=AC00_RS26650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS26650;pseudo=true NZ_JJLU01000109.1 Protein Homology CDS 104443 106550 . - 0 ID=cds-AC00_RS26650;Parent=gene-AC00_RS26650;Note=frameshifted%3B internal stop;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010349194.1;locus_tag=AC00_RS26650;product=RecQ family ATP-dependent DNA helicase;pseudo=true;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 106690 108030 . - . ID=gene-AC00_RS06425;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=AC00_RS06425;old_locus_tag=AC00_3877 NZ_JJLU01000109.1 Protein Homology CDS 106690 108030 . - 0 ID=cds-WP_032288304.1;Parent=gene-AC00_RS06425;Dbxref=GenBank:WP_032288304.1;Name=WP_032288304.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312312.1;locus_tag=AC00_RS06425;product=gluconate transporter;protein_id=WP_032288304.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 108034 108561 . - . ID=gene-AC00_RS06420;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=AC00_RS06420;old_locus_tag=AC00_3878 NZ_JJLU01000109.1 Protein Homology CDS 108034 108561 . - 0 ID=cds-WP_000108330.1;Parent=gene-AC00_RS06420;Dbxref=GenBank:WP_000108330.1;Name=WP_000108330.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417894.2;locus_tag=AC00_RS06420;product=gluconokinase;protein_id=WP_000108330.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 108701 109696 . - . ID=gene-AC00_RS06415;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=AC00_RS06415;old_locus_tag=AC00_3879 NZ_JJLU01000109.1 Protein Homology CDS 108701 109696 . - 0 ID=cds-WP_001394951.1;Parent=gene-AC00_RS06415;Dbxref=GenBank:WP_001394951.1;Name=WP_001394951.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=AC00_RS06415;product=gluconate operon transcriptional repressor GntR;protein_id=WP_001394951.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 109920 110615 . - . ID=gene-AC00_RS06410;Name=yhhW;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=AC00_RS06410;old_locus_tag=AC00_3880 NZ_JJLU01000109.1 Protein Homology CDS 109920 110615 . - 0 ID=cds-WP_000639811.1;Parent=gene-AC00_RS06410;Dbxref=GenBank:WP_000639811.1;Name=WP_000639811.1;gbkey=CDS;gene=yhhW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=AC00_RS06410;product=quercetin 2%2C3-dioxygenase;protein_id=WP_000639811.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 110738 111775 . - . ID=gene-AC00_RS06405;Name=yhhX;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=AC00_RS06405;old_locus_tag=AC00_3881 NZ_JJLU01000109.1 Protein Homology CDS 110738 111775 . - 0 ID=cds-WP_032281729.1;Parent=gene-AC00_RS06405;Dbxref=GenBank:WP_032281729.1;Name=WP_032281729.1;Ontology_term=GO:0000166;gbkey=CDS;gene=yhhX;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312316.1;locus_tag=AC00_RS06405;product=oxidoreductase;protein_id=WP_032281729.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 112109 112597 . + . ID=gene-AC00_RS06400;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=AC00_RS06400;old_locus_tag=AC00_3882 NZ_JJLU01000109.1 Protein Homology CDS 112109 112597 . + 0 ID=cds-WP_032281730.1;Parent=gene-AC00_RS06400;Dbxref=GenBank:WP_032281730.1;Name=WP_032281730.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709216.1;locus_tag=AC00_RS06400;product=N-acetyltransferase;protein_id=WP_032281730.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 112658 114403 . - . ID=gene-AC00_RS06395;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=AC00_RS06395;old_locus_tag=AC00_3883 NZ_JJLU01000109.1 Protein Homology CDS 112658 114403 . - 0 ID=cds-WP_032281731.1;Parent=gene-AC00_RS06395;Dbxref=GenBank:WP_032281731.1;Name=WP_032281731.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001486198.1;locus_tag=AC00_RS06395;product=gamma-glutamyltransferase;protein_id=WP_032281731.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 114523 114963 . + . ID=gene-AC00_RS06390;Name=yhhA;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=AC00_RS06390;old_locus_tag=AC00_3884 NZ_JJLU01000109.1 Protein Homology CDS 114523 114963 . + 0 ID=cds-WP_032281732.1;Parent=gene-AC00_RS06390;Dbxref=GenBank:WP_032281732.1;Name=WP_032281732.1;gbkey=CDS;gene=yhhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312321.1;locus_tag=AC00_RS06390;product=DUF2756 family protein;protein_id=WP_032281732.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 114950 115693 . - . ID=gene-AC00_RS06385;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=AC00_RS06385;old_locus_tag=AC00_3885 NZ_JJLU01000109.1 Protein Homology CDS 114950 115693 . - 0 ID=cds-WP_032281733.1;Parent=gene-AC00_RS06385;Dbxref=GenBank:WP_032281733.1;Name=WP_032281733.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312322.1;locus_tag=AC00_RS06385;product=glycerophosphodiester phosphodiesterase;protein_id=WP_032281733.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 115690 116760 . - . ID=gene-AC00_RS06380;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=AC00_RS06380;old_locus_tag=AC00_3886 NZ_JJLU01000109.1 Protein Homology CDS 115690 116760 . - 0 ID=cds-WP_000907798.1;Parent=gene-AC00_RS06380;Dbxref=GenBank:WP_000907798.1;Name=WP_000907798.1;gbkey=CDS;gene=ugpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417907.2;locus_tag=AC00_RS06380;product=sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC;protein_id=WP_000907798.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 116762 117607 . - . ID=gene-AC00_RS06375;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=AC00_RS06375;old_locus_tag=AC00_3887 NZ_JJLU01000109.1 Protein Homology CDS 116762 117607 . - 0 ID=cds-WP_032281734.1;Parent=gene-AC00_RS06375;Dbxref=GenBank:WP_032281734.1;Name=WP_032281734.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=AC00_RS06375;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_032281734.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 117604 118491 . - . ID=gene-AC00_RS06370;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=AC00_RS06370;old_locus_tag=AC00_3888 NZ_JJLU01000109.1 Protein Homology CDS 117604 118491 . - 0 ID=cds-WP_000099272.1;Parent=gene-AC00_RS06370;Dbxref=GenBank:WP_000099272.1;Name=WP_000099272.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=AC00_RS06370;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_000099272.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 118589 119905 . - . ID=gene-AC00_RS06365;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=AC00_RS06365;old_locus_tag=AC00_3889 NZ_JJLU01000109.1 Protein Homology CDS 118589 119905 . - 0 ID=cds-WP_000803204.1;Parent=gene-AC00_RS06365;Dbxref=GenBank:WP_000803204.1;Name=WP_000803204.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312326.1;locus_tag=AC00_RS06365;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_000803204.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 120265 121011 . - . ID=gene-AC00_RS06360;Name=AC00_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06360;old_locus_tag=AC00_3891 NZ_JJLU01000109.1 Protein Homology CDS 120265 121011 . - 0 ID=cds-WP_023308415.1;Parent=gene-AC00_RS06360;Dbxref=GenBank:WP_023308415.1;Name=WP_023308415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312327.1;locus_tag=AC00_RS06360;product=tetratricopeptide repeat protein;protein_id=WP_023308415.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 121130 121843 . - . ID=gene-AC00_RS06355;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=AC00_RS06355;old_locus_tag=AC00_3893 NZ_JJLU01000109.1 Protein Homology CDS 121130 121843 . - 0 ID=cds-WP_000416895.1;Parent=gene-AC00_RS06355;Dbxref=GenBank:WP_000416895.1;Name=WP_000416895.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312328.2;locus_tag=AC00_RS06355;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_000416895.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 121845 122612 . - . ID=gene-AC00_RS06350;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=AC00_RS06350;old_locus_tag=AC00_3894 NZ_JJLU01000109.1 Protein Homology CDS 121845 122612 . - 0 ID=cds-WP_032281736.1;Parent=gene-AC00_RS06350;Dbxref=GenBank:WP_032281736.1;Name=WP_032281736.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=AC00_RS06350;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_032281736.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 122609 123886 . - . ID=gene-AC00_RS06345;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=AC00_RS06345;old_locus_tag=AC00_3895 NZ_JJLU01000109.1 Protein Homology CDS 122609 123886 . - 0 ID=cds-WP_032281737.1;Parent=gene-AC00_RS06345;Dbxref=GenBank:WP_032281737.1;Name=WP_032281737.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312330.1;locus_tag=AC00_RS06345;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_032281737.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 123883 124809 . - . ID=gene-AC00_RS06340;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=AC00_RS06340;old_locus_tag=AC00_3896 NZ_JJLU01000109.1 Protein Homology CDS 123883 124809 . - 0 ID=cds-WP_001295097.1;Parent=gene-AC00_RS06340;Dbxref=GenBank:WP_001295097.1;Name=WP_001295097.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=AC00_RS06340;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_001295097.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 124857 125966 . - . ID=gene-AC00_RS06335;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=AC00_RS06335;old_locus_tag=AC00_3897 NZ_JJLU01000109.1 Protein Homology CDS 124857 125966 . - 0 ID=cds-WP_032281738.1;Parent=gene-AC00_RS06335;Dbxref=GenBank:WP_032281738.1;Name=WP_032281738.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312332.1;locus_tag=AC00_RS06335;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_032281738.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 126390 126773 . + . ID=gene-AC00_RS06330;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=AC00_RS06330;old_locus_tag=AC00_3899 NZ_JJLU01000109.1 Protein Homology CDS 126390 126773 . + 0 ID=cds-WP_032281739.1;Parent=gene-AC00_RS06330;Dbxref=GenBank:WP_032281739.1;Name=WP_032281739.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709229.1;locus_tag=AC00_RS06330;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_032281739.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 126973 128076 . - . ID=gene-AC00_RS06325;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=AC00_RS06325;old_locus_tag=AC00_3900 NZ_JJLU01000109.1 Protein Homology CDS 126973 128076 . - 0 ID=cds-WP_001021996.1;Parent=gene-AC00_RS06325;Dbxref=GenBank:WP_001021996.1;Name=WP_001021996.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=AC00_RS06325;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_001021996.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 128347 129201 . - . ID=gene-AC00_RS06320;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AC00_RS06320;old_locus_tag=AC00_3901 NZ_JJLU01000109.1 Protein Homology CDS 128347 129201 . - 0 ID=cds-WP_000130217.1;Parent=gene-AC00_RS06320;Dbxref=GenBank:WP_000130217.1;Name=WP_000130217.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312337.1;locus_tag=AC00_RS06320;product=RNA polymerase sigma factor RpoH;protein_id=WP_000130217.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 129446 130504 . - . ID=gene-AC00_RS06315;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=AC00_RS06315;old_locus_tag=AC00_3902 NZ_JJLU01000109.1 Protein Homology CDS 129446 130504 . - 0 ID=cds-WP_001042003.1;Parent=gene-AC00_RS06315;Dbxref=GenBank:WP_001042003.1;Name=WP_001042003.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417919.1;locus_tag=AC00_RS06315;product=permease-like cell division protein FtsX;protein_id=WP_001042003.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 130497 131165 . - . ID=gene-AC00_RS06310;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=AC00_RS06310;old_locus_tag=AC00_3903 NZ_JJLU01000109.1 Protein Homology CDS 130497 131165 . - 0 ID=cds-WP_000617723.1;Parent=gene-AC00_RS06310;Dbxref=GenBank:WP_000617723.1;Name=WP_000617723.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312339.1;locus_tag=AC00_RS06310;product=cell division ATP-binding protein FtsE;protein_id=WP_000617723.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 131168 132664 . - . ID=gene-AC00_RS06305;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AC00_RS06305;old_locus_tag=AC00_3904 NZ_JJLU01000109.1 Protein Homology CDS 131168 132664 . - 0 ID=cds-WP_032281740.1;Parent=gene-AC00_RS06305;Dbxref=GenBank:WP_032281740.1;Name=WP_032281740.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312340.1;locus_tag=AC00_RS06305;product=signal recognition particle-docking protein FtsY;protein_id=WP_032281740.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 132814 133410 . + . ID=gene-AC00_RS06300;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AC00_RS06300;old_locus_tag=AC00_3905 NZ_JJLU01000109.1 Protein Homology CDS 132814 133410 . + 0 ID=cds-WP_000743193.1;Parent=gene-AC00_RS06300;Dbxref=GenBank:WP_000743193.1;Name=WP_000743193.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417922.1;locus_tag=AC00_RS06300;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_000743193.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 133400 133669 . + . ID=gene-AC00_RS06295;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=AC00_RS06295;old_locus_tag=AC00_3906 NZ_JJLU01000109.1 Protein Homology CDS 133400 133669 . + 0 ID=cds-WP_001295207.1;Parent=gene-AC00_RS06295;Dbxref=GenBank:WP_001295207.1;Name=WP_001295207.1;gbkey=CDS;gene=yhhL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312342.1;locus_tag=AC00_RS06295;product=DUF1145 family protein;protein_id=WP_001295207.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 133672 134031 . - . ID=gene-AC00_RS06290;Name=yhhM;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=AC00_RS06290;old_locus_tag=AC00_3907 NZ_JJLU01000109.1 Protein Homology CDS 133672 134031 . - 0 ID=cds-WP_032281741.1;Parent=gene-AC00_RS06290;Dbxref=GenBank:WP_032281741.1;Name=WP_032281741.1;gbkey=CDS;gene=yhhM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417924.1;locus_tag=AC00_RS06290;product=DUF2500 domain-containing protein;protein_id=WP_032281741.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 134172 134798 . + . ID=gene-AC00_RS06285;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=AC00_RS06285;old_locus_tag=AC00_3908 NZ_JJLU01000109.1 Protein Homology CDS 134172 134798 . + 0 ID=cds-WP_000964718.1;Parent=gene-AC00_RS06285;Dbxref=GenBank:WP_000964718.1;Name=WP_000964718.1;gbkey=CDS;gene=yhhN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312344.1;locus_tag=AC00_RS06285;product=lysoplasmalogenase;protein_id=WP_000964718.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 134872 137070 . + . ID=gene-AC00_RS06280;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=AC00_RS06280;old_locus_tag=AC00_3909 NZ_JJLU01000109.1 Protein Homology CDS 134872 137070 . + 0 ID=cds-WP_032281742.1;Parent=gene-AC00_RS06280;Dbxref=GenBank:WP_032281742.1;Name=WP_032281742.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312345.1;locus_tag=AC00_RS06280;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_032281742.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 137172 137417 . - . ID=gene-AC00_RS06275;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=AC00_RS06275;old_locus_tag=AC00_3910 NZ_JJLU01000109.1 Protein Homology CDS 137172 137417 . - 0 ID=cds-WP_000130621.1;Parent=gene-AC00_RS06275;Dbxref=GenBank:WP_000130621.1;Name=WP_000130621.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312346.1;locus_tag=AC00_RS06275;product=sulfurtransferase TusA;protein_id=WP_000130621.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 137638 138303 . + . ID=gene-AC00_RS06270;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=AC00_RS06270;old_locus_tag=AC00_3911 NZ_JJLU01000109.1 Protein Homology CDS 137638 138303 . + 0 ID=cds-WP_001100467.1;Parent=gene-AC00_RS06270;Dbxref=GenBank:WP_001100467.1;Name=WP_001100467.1;Ontology_term=GO:1990397;gbkey=CDS;gene=yhhQ;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312347.1;locus_tag=AC00_RS06270;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_001100467.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 138376 138933 . + . ID=gene-AC00_RS06265;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=AC00_RS06265;old_locus_tag=AC00_3912 NZ_JJLU01000109.1 Protein Homology CDS 138376 138933 . + 0 ID=cds-WP_001245295.1;Parent=gene-AC00_RS06265;Dbxref=GenBank:WP_001245295.1;Name=WP_001245295.1;gbkey=CDS;gene=dcrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417929.4;locus_tag=AC00_RS06265;product=phage sensitivity protein DcrB;protein_id=WP_001245295.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 138937 140154 . - . ID=gene-AC00_RS06260;Name=yhhS;gbkey=Gene;gene=yhhS;gene_biotype=protein_coding;locus_tag=AC00_RS06260;old_locus_tag=AC00_3913 NZ_JJLU01000109.1 Protein Homology CDS 138937 140154 . - 0 ID=cds-WP_032288305.1;Parent=gene-AC00_RS06260;Dbxref=GenBank:WP_032288305.1;Name=WP_032288305.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=yhhS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417930.2;locus_tag=AC00_RS06260;product=MFS transporter;protein_id=WP_032288305.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 140286 141335 . + . ID=gene-AC00_RS06255;Name=yhhT;gbkey=Gene;gene=yhhT;gene_biotype=protein_coding;locus_tag=AC00_RS06255;old_locus_tag=AC00_3914 NZ_JJLU01000109.1 Protein Homology CDS 140286 141335 . + 0 ID=cds-WP_001297848.1;Parent=gene-AC00_RS06255;Dbxref=GenBank:WP_001297848.1;Name=WP_001297848.1;gbkey=CDS;gene=yhhT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312350.2;locus_tag=AC00_RS06255;product=AI-2E family transporter;protein_id=WP_001297848.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 141727 142104 . + . ID=gene-AC00_RS06250;Name=AC00_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06250;old_locus_tag=AC00_3915 NZ_JJLU01000109.1 Protein Homology CDS 141727 142104 . + 0 ID=cds-WP_001301470.1;Parent=gene-AC00_RS06250;Dbxref=GenBank:WP_001301470.1;Name=WP_001301470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312351.1;locus_tag=AC00_RS06250;product=lipoprotein;protein_id=WP_001301470.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 142173 143231 . + . ID=gene-AC00_RS06245;Name=AC00_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06245;old_locus_tag=AC00_3916 NZ_JJLU01000109.1 Protein Homology CDS 142173 143231 . + 0 ID=cds-WP_032281744.1;Parent=gene-AC00_RS06245;Dbxref=GenBank:WP_032281744.1;Name=WP_032281744.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312352.2;locus_tag=AC00_RS06245;product=methyltransferase;protein_id=WP_032281744.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 143272 143994 . + . ID=gene-AC00_RS06240;Name=AC00_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06240;old_locus_tag=AC00_3917 NZ_JJLU01000109.1 Protein Homology CDS 143272 143994 . + 0 ID=cds-WP_001313357.1;Parent=gene-AC00_RS06240;Dbxref=GenBank:WP_001313357.1;Name=WP_001313357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842634.1;locus_tag=AC00_RS06240;product=beta-ketoacyl synthase chain length factor;protein_id=WP_001313357.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 143991 144812 . + . ID=gene-AC00_RS06235;Name=AC00_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06235;old_locus_tag=AC00_3918 NZ_JJLU01000109.1 Protein Homology CDS 143991 144812 . + 0 ID=cds-WP_001308112.1;Parent=gene-AC00_RS06235;Dbxref=GenBank:WP_001308112.1;Name=WP_001308112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312354.2;locus_tag=AC00_RS06235;product=lysophospholipid acyltransferase family protein;protein_id=WP_001308112.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 144787 145044 . + . ID=gene-AC00_RS06230;Name=AC00_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06230;old_locus_tag=AC00_3919 NZ_JJLU01000109.1 Protein Homology CDS 144787 145044 . + 0 ID=cds-WP_032281746.1;Parent=gene-AC00_RS06230;Dbxref=GenBank:WP_032281746.1;Name=WP_032281746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312355.1;locus_tag=AC00_RS06230;product=phosphopantetheine-binding protein;protein_id=WP_032281746.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 145056 145307 . + . ID=gene-AC00_RS06225;Name=AC00_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06225;old_locus_tag=AC00_3920 NZ_JJLU01000109.1 Protein Homology CDS 145056 145307 . + 0 ID=cds-WP_000139646.1;Parent=gene-AC00_RS06225;Dbxref=GenBank:WP_000139646.1;Name=WP_000139646.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312356.1;locus_tag=AC00_RS06225;product=acyl carrier protein;protein_id=WP_000139646.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 145312 145893 . + . ID=gene-AC00_RS06220;Name=AC00_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06220;old_locus_tag=AC00_3921 NZ_JJLU01000109.1 Protein Homology CDS 145312 145893 . + 0 ID=cds-WP_000014365.1;Parent=gene-AC00_RS06220;Dbxref=GenBank:WP_000014365.1;Name=WP_000014365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312357.1;locus_tag=AC00_RS06220;product=hypothetical protein;protein_id=WP_000014365.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 145890 147251 . + . ID=gene-AC00_RS06215;Name=AC00_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06215;old_locus_tag=AC00_3922 NZ_JJLU01000109.1 Protein Homology CDS 145890 147251 . + 0 ID=cds-WP_000815061.1;Parent=gene-AC00_RS06215;Dbxref=GenBank:WP_000815061.1;Name=WP_000815061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312358.1;locus_tag=AC00_RS06215;product=AMP-binding protein;protein_id=WP_000815061.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 147238 147591 . + . ID=gene-AC00_RS06210;Name=AC00_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06210;old_locus_tag=AC00_3923 NZ_JJLU01000109.1 Protein Homology CDS 147238 147591 . + 0 ID=cds-WP_001301597.1;Parent=gene-AC00_RS06210;Dbxref=GenBank:WP_001301597.1;Name=WP_001301597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312359.1;locus_tag=AC00_RS06210;product=3-hydroxyacyl-ACP dehydratase FabZ family protein;protein_id=WP_001301597.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 147582 149258 . + . ID=gene-AC00_RS06205;Name=AC00_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06205;old_locus_tag=AC00_3924 NZ_JJLU01000109.1 Protein Homology CDS 147582 149258 . + 0 ID=cds-WP_032281750.1;Parent=gene-AC00_RS06205;Dbxref=GenBank:WP_032281750.1;Name=WP_032281750.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312360.1;locus_tag=AC00_RS06205;product=glycosyltransferase family 2 protein;protein_id=WP_032281750.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 149262 149684 . + . ID=gene-AC00_RS06200;Name=AC00_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06200;old_locus_tag=AC00_3925 NZ_JJLU01000109.1 Protein Homology CDS 149262 149684 . + 0 ID=cds-WP_000930891.1;Parent=gene-AC00_RS06200;Dbxref=GenBank:WP_000930891.1;Name=WP_000930891.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312361.1;locus_tag=AC00_RS06200;product=acyl-CoA thioesterase;protein_id=WP_000930891.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 149681 150286 . + . ID=gene-AC00_RS06195;Name=AC00_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06195;old_locus_tag=AC00_3926 NZ_JJLU01000109.1 Protein Homology CDS 149681 150286 . + 0 ID=cds-WP_032281751.1;Parent=gene-AC00_RS06195;Dbxref=GenBank:WP_032281751.1;Name=WP_032281751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312362.1;locus_tag=AC00_RS06195;product=LolA family protein;protein_id=WP_032281751.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 150255 152573 . + . ID=gene-AC00_RS06190;Name=AC00_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06190;old_locus_tag=AC00_3927 NZ_JJLU01000109.1 Protein Homology CDS 150255 152573 . + 0 ID=cds-WP_032281753.1;Parent=gene-AC00_RS06190;Dbxref=GenBank:WP_032281753.1;Name=WP_032281753.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312363.2;locus_tag=AC00_RS06190;product=MMPL family transporter;protein_id=WP_032281753.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 152570 153154 . + . ID=gene-AC00_RS06185;Name=AC00_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06185;old_locus_tag=AC00_3928 NZ_JJLU01000109.1 Protein Homology CDS 152570 153154 . + 0 ID=cds-WP_000597700.1;Parent=gene-AC00_RS06185;Dbxref=GenBank:WP_000597700.1;Name=WP_000597700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312364.1;locus_tag=AC00_RS06185;product=DUF3261 domain-containing protein;protein_id=WP_000597700.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 153156 154325 . + . ID=gene-AC00_RS06180;Name=AC00_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06180;old_locus_tag=AC00_3929 NZ_JJLU01000109.1 Protein Homology CDS 153156 154325 . + 0 ID=cds-WP_032281755.1;Parent=gene-AC00_RS06180;Dbxref=GenBank:WP_032281755.1;Name=WP_032281755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312365.1;locus_tag=AC00_RS06180;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_032281755.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 154322 154786 . + . ID=gene-AC00_RS06175;Name=AC00_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06175;old_locus_tag=AC00_3930 NZ_JJLU01000109.1 Protein Homology CDS 154322 154786 . + 0 ID=cds-WP_000020240.1;Parent=gene-AC00_RS06175;Dbxref=GenBank:WP_000020240.1;Name=WP_000020240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312366.1;locus_tag=AC00_RS06175;product=3-hydroxy-fatty acyl-ACP dehydratase;protein_id=WP_000020240.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 154786 155517 . + . ID=gene-AC00_RS06170;Name=AC00_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06170;old_locus_tag=AC00_3931 NZ_JJLU01000109.1 Protein Homology CDS 154786 155517 . + 0 ID=cds-WP_000091664.1;Parent=gene-AC00_RS06170;Dbxref=GenBank:WP_000091664.1;Name=WP_000091664.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312367.1;locus_tag=AC00_RS06170;product=3-ketoacyl-ACP reductase FabG2;protein_id=WP_000091664.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 155514 156743 . + . ID=gene-AC00_RS06165;Name=AC00_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06165;old_locus_tag=AC00_3932 NZ_JJLU01000109.1 Protein Homology CDS 155514 156743 . + 0 ID=cds-WP_000198472.1;Parent=gene-AC00_RS06165;Dbxref=GenBank:WP_000198472.1;Name=WP_000198472.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312368.1;locus_tag=AC00_RS06165;product=beta-ketoacyl-ACP synthase;protein_id=WP_000198472.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 156745 157332 . + . ID=gene-AC00_RS06160;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=AC00_RS06160;old_locus_tag=AC00_3933 NZ_JJLU01000109.1 Protein Homology CDS 156745 157332 . + 0 ID=cds-WP_000285784.1;Parent=gene-AC00_RS06160;Dbxref=GenBank:WP_000285784.1;Name=WP_000285784.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312369.1;locus_tag=AC00_RS06160;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_000285784.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 157444 159018 . + . ID=gene-AC00_RS06155;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=AC00_RS06155;old_locus_tag=AC00_3934 NZ_JJLU01000109.1 Protein Homology CDS 157444 159018 . + 0 ID=cds-WP_000953368.1;Parent=gene-AC00_RS06155;Dbxref=GenBank:WP_000953368.1;Name=WP_000953368.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312370.1;locus_tag=AC00_RS06155;product=nickel ABC transporter substrate-binding protein;protein_id=WP_000953368.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 159018 159962 . + . ID=gene-AC00_RS06150;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=AC00_RS06150;old_locus_tag=AC00_3935 NZ_JJLU01000109.1 Protein Homology CDS 159018 159962 . + 0 ID=cds-WP_032281756.1;Parent=gene-AC00_RS06150;Dbxref=GenBank:WP_032281756.1;Name=WP_032281756.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417934.1;locus_tag=AC00_RS06150;product=nickel ABC transporter permease subunit NikB;protein_id=WP_032281756.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 159959 160792 . + . ID=gene-AC00_RS06145;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=AC00_RS06145;old_locus_tag=AC00_3936 NZ_JJLU01000109.1 Protein Homology CDS 159959 160792 . + 0 ID=cds-WP_001008963.1;Parent=gene-AC00_RS06145;Dbxref=GenBank:WP_001008963.1;Name=WP_001008963.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312372.1;locus_tag=AC00_RS06145;product=nickel ABC transporter permease subunit NikC;protein_id=WP_001008963.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 160792 161556 . + . ID=gene-AC00_RS06140;Name=nikD;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=AC00_RS06140;old_locus_tag=AC00_3937 NZ_JJLU01000109.1 Protein Homology CDS 160792 161556 . + 0 ID=cds-WP_032281757.1;Parent=gene-AC00_RS06140;Dbxref=GenBank:WP_032281757.1;Name=WP_032281757.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0005886,GO:0043190;gbkey=CDS;gene=nikD;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312373.1;locus_tag=AC00_RS06140;product=nickel import ATP-binding protein NikD;protein_id=WP_032281757.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 161553 162359 . + . ID=gene-AC00_RS06135;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=AC00_RS06135;old_locus_tag=AC00_3938 NZ_JJLU01000109.1 Protein Homology CDS 161553 162359 . + 0 ID=cds-WP_032288306.1;Parent=gene-AC00_RS06135;Dbxref=GenBank:WP_032288306.1;Name=WP_032288306.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0005886,GO:0043190;gbkey=CDS;gene=nikE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709250.1;locus_tag=AC00_RS06135;product=nickel import ATP-binding protein NikE;protein_id=WP_032288306.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 162365 162766 . + . ID=gene-AC00_RS06130;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=AC00_RS06130;old_locus_tag=AC00_3939 NZ_JJLU01000109.1 Protein Homology CDS 162365 162766 . + 0 ID=cds-WP_001190062.1;Parent=gene-AC00_RS06130;Dbxref=GenBank:WP_001190062.1;Name=WP_001190062.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312375.1;locus_tag=AC00_RS06130;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_001190062.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 162886 163245 . - . ID=gene-AC00_RS06125;Name=AC00_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06125;old_locus_tag=AC00_3940 NZ_JJLU01000109.1 Protein Homology CDS 162886 163245 . - 0 ID=cds-WP_000593555.1;Parent=gene-AC00_RS06125;Dbxref=GenBank:WP_000593555.1;Name=WP_000593555.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312383.1;locus_tag=AC00_RS06125;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_000593555.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 163242 163517 . - . ID=gene-AC00_RS0125565;Name=AC00_RS0125565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125565 NZ_JJLU01000109.1 Protein Homology CDS 163242 163517 . - 0 ID=cds-WP_001259382.1;Parent=gene-AC00_RS0125565;Dbxref=GenBank:WP_001259382.1;Name=WP_001259382.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312384.1;locus_tag=AC00_RS0125565;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_001259382.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 163590 164714 . - . ID=gene-AC00_RS06120;Name=yhhJ;gbkey=Gene;gene=yhhJ;gene_biotype=protein_coding;locus_tag=AC00_RS06120;old_locus_tag=AC00_3941 NZ_JJLU01000109.1 Protein Homology CDS 163590 164714 . - 0 ID=cds-WP_001314210.1;Parent=gene-AC00_RS06120;Dbxref=GenBank:WP_001314210.1;Name=WP_001314210.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;gene=yhhJ;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709253.2;locus_tag=AC00_RS06120;product=ABC transporter permease;protein_id=WP_001314210.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 164714 167449 . - . ID=gene-AC00_RS06115;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=AC00_RS06115;old_locus_tag=AC00_3942 NZ_JJLU01000109.1 Protein Homology CDS 164714 167449 . - 0 ID=cds-WP_032288307.1;Parent=gene-AC00_RS06115;Dbxref=GenBank:WP_032288307.1;Name=WP_032288307.1;gbkey=CDS;gene=rbbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709254.1;locus_tag=AC00_RS06115;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_032288307.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 167446 168513 . - . ID=gene-AC00_RS06110;Name=yhiI;gbkey=Gene;gene=yhiI;gene_biotype=protein_coding;locus_tag=AC00_RS06110;old_locus_tag=AC00_3943 NZ_JJLU01000109.1 Protein Homology CDS 167446 168513 . - 0 ID=cds-WP_032288308.1;Parent=gene-AC00_RS06110;Dbxref=GenBank:WP_032288308.1;Name=WP_032288308.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhiI;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312387.1;locus_tag=AC00_RS06110;product=HlyD family secretion protein;protein_id=WP_032288308.1;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 168576 168689 . - . ID=gene-AC00_RS31320;Name=yhiY;gbkey=Gene;gene=yhiY;gene_biotype=protein_coding;locus_tag=AC00_RS31320;old_locus_tag=AC00_3944 NZ_JJLU01000109.1 Protein Homology CDS 168576 168689 . - 0 ID=cds-WP_001296785.1;Parent=gene-AC00_RS31320;Dbxref=GenBank:WP_001296785.1;Name=WP_001296785.1;gbkey=CDS;gene=yhiY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051203.1;locus_tag=AC00_RS31320;product=protein YhiY;protein_id=WP_001296785.1;transl_table=11 NZ_JJLU01000109.1 RefSeq pseudogene 168879 169355 . - . ID=gene-AC00_RS28310;Name=AC00_RS28310;end_range=169355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28310;partial=true;pseudo=true NZ_JJLU01000109.1 Protein Homology CDS 168879 169355 . - 0 ID=cds-AC00_RS28310;Parent=gene-AC00_RS28310;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=169355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417945.1;locus_tag=AC00_RS28310;partial=true;product=DUF4049 domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000109.1 RefSeq gene 169372 169633 . - . ID=gene-AC00_RS06105;Name=AC00_RS06105;end_range=169633,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06105;old_locus_tag=AC00_3945;partial=true NZ_JJLU01000109.1 Protein Homology CDS 169372 169633 . - 1 ID=cds-WP_000317723.1-3;Parent=gene-AC00_RS06105;Dbxref=GenBank:WP_000317723.1;Name=WP_000317723.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=169633,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS06105;partial=true;product=IS1 family transposase;protein_id=WP_000317723.1;transl_table=11 ##sequence-region NZ_JJLU01000110.1 1 4141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000110.1 RefSeq region 1 4141 . + . ID=NZ_JJLU01000110.1:1..4141;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000110.1 RefSeq pseudogene 1 873 . - . ID=gene-AC00_RS29780;Name=AC00_RS29780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29780;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000110.1 Protein Homology CDS 1 873 . - 0 ID=cds-AC00_RS29780;Parent=gene-AC00_RS29780;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AC00_RS29780;partial=true;product=IS3-like element IS2 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000110.1 RefSeq gene 947 1141 . + . ID=gene-AC00_RS06095;Name=AC00_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06095;old_locus_tag=AC00_3948 NZ_JJLU01000110.1 Protein Homology CDS 947 1141 . + 0 ID=cds-WP_032281597.1;Parent=gene-AC00_RS06095;Dbxref=GenBank:WP_032281597.1;Name=WP_032281597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311762.1;locus_tag=AC00_RS06095;product=GhoT/OrtT family toxin;protein_id=WP_032281597.1;transl_table=11 NZ_JJLU01000110.1 RefSeq gene 1487 2236 . + . ID=gene-AC00_RS06090;Name=AC00_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06090;old_locus_tag=AC00_3949 NZ_JJLU01000110.1 Protein Homology CDS 1487 2236 . + 0 ID=cds-WP_032281596.1;Parent=gene-AC00_RS06090;Dbxref=GenBank:WP_032281596.1;Name=WP_032281596.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311761.1;locus_tag=AC00_RS06090;product=helix-turn-helix domain-containing protein;protein_id=WP_032281596.1;transl_table=11 NZ_JJLU01000110.1 RefSeq pseudogene 2233 3789 . + . ID=gene-AC00_RS06085;Name=sctC;end_range=3789,.;gbkey=Gene;gene=sctC;gene_biotype=pseudogene;locus_tag=AC00_RS06085;old_locus_tag=AC00_3950;partial=true;pseudo=true NZ_JJLU01000110.1 Protein Homology CDS 2233 3789 . + 0 ID=cds-AC00_RS06085;Parent=gene-AC00_RS06085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009306;end_range=3789,.;gbkey=CDS;gene=sctC;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311760.1;locus_tag=AC00_RS06085;partial=true;product=type III secretion system outer membrane ring subunit SctC;pseudo=true;transl_table=11 NZ_JJLU01000110.1 RefSeq pseudogene 3846 4141 . + . ID=gene-AC00_RS0125575;Name=AC00_RS0125575;end_range=4141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125575;partial=true;pseudo=true NZ_JJLU01000110.1 Protein Homology CDS 3846 4141 . + 0 ID=cds-AC00_RS0125575;Parent=gene-AC00_RS0125575;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=4141,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0125575;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000111.1 1 14248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000111.1 RefSeq region 1 14248 . + . ID=NZ_JJLU01000111.1:1..14248;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000111.1 RefSeq gene 1 233 . - . ID=gene-AC00_RS0125580;Name=AC00_RS0125580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125580;old_locus_tag=AC00_3952;partial=true;start_range=.,1 NZ_JJLU01000111.1 Protein Homology CDS 1 233 . - 0 ID=cds-WP_001397795.1-4;Parent=gene-AC00_RS0125580;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0125580;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;start_range=.,1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 706 1758 . + . ID=gene-AC00_RS06080;Name=yhiM;gbkey=Gene;gene=yhiM;gene_biotype=protein_coding;locus_tag=AC00_RS06080;old_locus_tag=AC00_3954 NZ_JJLU01000111.1 Protein Homology CDS 706 1758 . + 0 ID=cds-WP_001461685.1;Parent=gene-AC00_RS06080;Dbxref=GenBank:WP_001461685.1;Name=WP_001461685.1;gbkey=CDS;gene=yhiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417948.4;locus_tag=AC00_RS06080;product=DUF2776 domain-containing protein;protein_id=WP_001461685.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 2073 3275 . - . ID=gene-AC00_RS06075;Name=yhiN;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=AC00_RS06075;old_locus_tag=AC00_3955 NZ_JJLU01000111.1 Protein Homology CDS 2073 3275 . - 0 ID=cds-WP_000439188.1;Parent=gene-AC00_RS06075;Dbxref=GenBank:WP_000439188.1;Name=WP_000439188.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;gene=yhiN;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417949.1;locus_tag=AC00_RS06075;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_000439188.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 3507 5006 . + . ID=gene-AC00_RS06070;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=AC00_RS06070;old_locus_tag=AC00_3956 NZ_JJLU01000111.1 Protein Homology CDS 3507 5006 . + 0 ID=cds-WP_000902780.1;Parent=gene-AC00_RS06070;Dbxref=GenBank:WP_000902780.1;Name=WP_000902780.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312392.1;locus_tag=AC00_RS06070;product=inorganic phosphate transporter PitA;protein_id=WP_000902780.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 5077 5412 . - . ID=gene-AC00_RS0125595;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=AC00_RS0125595;old_locus_tag=AC00_3957 NZ_JJLU01000111.1 Protein Homology CDS 5077 5412 . - 0 ID=cds-WP_000626187.1;Parent=gene-AC00_RS0125595;Dbxref=GenBank:WP_000626187.1;Name=WP_000626187.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=AC00_RS0125595;product=universal stress protein UspB;protein_id=WP_000626187.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 5803 6237 . + . ID=gene-AC00_RS06065;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=AC00_RS06065;old_locus_tag=AC00_3958 NZ_JJLU01000111.1 Protein Homology CDS 5803 6237 . + 0 ID=cds-WP_000323571.1;Parent=gene-AC00_RS06065;Dbxref=GenBank:WP_000323571.1;Name=WP_000323571.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312394.1;locus_tag=AC00_RS06065;product=universal stress protein UspA;protein_id=WP_000323571.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 6304 6357 . - . ID=gene-AC00_RS31325;Name=AC00_RS31325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31325 NZ_JJLU01000111.1 Protein Homology CDS 6304 6357 . - 0 ID=cds-WP_223375011.1;Parent=gene-AC00_RS31325;Dbxref=GenBank:WP_223375011.1;Name=WP_223375011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051204.1;locus_tag=AC00_RS31325;product=hypothetical protein;protein_id=WP_223375011.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 6335 6388 . - . ID=gene-AC00_RS31330;Name=AC00_RS31330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31330 NZ_JJLU01000111.1 Protein Homology CDS 6335 6388 . - 0 ID=cds-WP_212734132.1;Parent=gene-AC00_RS31330;Dbxref=GenBank:WP_212734132.1;Name=WP_212734132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051205.1;locus_tag=AC00_RS31330;product=hypothetical protein;protein_id=WP_212734132.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 6554 8023 . + . ID=gene-AC00_RS06060;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=AC00_RS06060;old_locus_tag=AC00_3959 NZ_JJLU01000111.1 Protein Homology CDS 6554 8023 . + 0 ID=cds-WP_001098636.1;Parent=gene-AC00_RS06060;Dbxref=GenBank:WP_001098636.1;Name=WP_001098636.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312395.1;locus_tag=AC00_RS06060;product=dipeptide/tripeptide permease DtpB;protein_id=WP_001098636.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 8072 8824 . - . ID=gene-AC00_RS06055;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=AC00_RS06055;old_locus_tag=AC00_3960 NZ_JJLU01000111.1 Protein Homology CDS 8072 8824 . - 0 ID=cds-WP_000686620.1;Parent=gene-AC00_RS06055;Dbxref=GenBank:WP_000686620.1;Name=WP_000686620.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312396.1;locus_tag=AC00_RS06055;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_000686620.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 8832 10874 . - . ID=gene-AC00_RS06050;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=AC00_RS06050;old_locus_tag=AC00_3961 NZ_JJLU01000111.1 Protein Homology CDS 8832 10874 . - 0 ID=cds-WP_032281768.1;Parent=gene-AC00_RS06050;Dbxref=GenBank:WP_032281768.1;Name=WP_032281768.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=AC00_RS06050;product=oligopeptidase A;protein_id=WP_032281768.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 11077 11919 . + . ID=gene-AC00_RS06045;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=AC00_RS06045;old_locus_tag=AC00_3962 NZ_JJLU01000111.1 Protein Homology CDS 11077 11919 . + 0 ID=cds-WP_000954225.1;Parent=gene-AC00_RS06045;Dbxref=GenBank:WP_000954225.1;Name=WP_000954225.1;gbkey=CDS;gene=rlmJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312398.1;locus_tag=AC00_RS06045;product=23S rRNA (adenine(2030)-N(6))-methyltransferase;protein_id=WP_000954225.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 11991 13346 . + . ID=gene-AC00_RS06040;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AC00_RS06040;old_locus_tag=AC00_3963 NZ_JJLU01000111.1 Protein Homology CDS 11991 13346 . + 0 ID=cds-WP_032281769.1;Parent=gene-AC00_RS06040;Dbxref=GenBank:WP_032281769.1;Name=WP_032281769.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=AC00_RS06040;product=glutathione-disulfide reductase;protein_id=WP_032281769.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 13476 13772 . - . ID=gene-AC00_RS31075;Name=AC00_RS31075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31075 NZ_JJLU01000111.1 GeneMarkS-2+ CDS 13476 13772 . - 0 ID=cds-WP_212593035.1;Parent=gene-AC00_RS31075;Dbxref=GenBank:WP_212593035.1;Name=WP_212593035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31075;product=hypothetical protein;protein_id=WP_212593035.1;transl_table=11 NZ_JJLU01000111.1 RefSeq gene 13997 14248 . - . ID=gene-AC00_RS06035;Name=AC00_RS06035;end_range=14248,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06035;old_locus_tag=AC00_3965;partial=true NZ_JJLU01000111.1 Protein Homology CDS 13997 14248 . - 0 ID=cds-WP_000306783.1-2;Parent=gene-AC00_RS06035;Dbxref=GenBank:WP_000306783.1;Name=WP_000306783.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=14248,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS06035;partial=true;product=IS1 family transposase;protein_id=WP_000306783.1;transl_table=11 ##sequence-region NZ_JJLU01000112.1 1 25805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000112.1 RefSeq region 1 25805 . + . ID=NZ_JJLU01000112.1:1..25805;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000112.1 RefSeq pseudogene 1 314 . - . ID=gene-AC00_RS28320;Name=AC00_RS28320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28320;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000112.1 Protein Homology CDS 1 314 . - 0 ID=cds-AC00_RS28320;Parent=gene-AC00_RS28320;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS28320;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 365 1261 . - . ID=gene-AC00_RS06030;Name=AC00_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06030;old_locus_tag=AC00_3968 NZ_JJLU01000112.1 Protein Homology CDS 365 1261 . - 0 ID=cds-WP_071999271.1;Parent=gene-AC00_RS06030;Dbxref=GenBank:WP_071999271.1;Name=WP_071999271.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF016724.6;locus_tag=AC00_RS06030;product=DEAD/DEAH box helicase;protein_id=WP_071999271.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 1255 1824 . - . ID=gene-AC00_RS0125600;Name=AC00_RS0125600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125600 NZ_JJLU01000112.1 GeneMarkS-2+ CDS 1255 1824 . - 0 ID=cds-WP_032288315.1;Parent=gene-AC00_RS0125600;Dbxref=GenBank:WP_032288315.1;Name=WP_032288315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0125600;product=hypothetical protein;protein_id=WP_032288315.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 1923 2234 . + . ID=gene-AC00_RS0125605;Name=AC00_RS0125605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125605 NZ_JJLU01000112.1 Protein Homology CDS 1923 2234 . + 0 ID=cds-WP_032288316.1;Parent=gene-AC00_RS0125605;Dbxref=GenBank:WP_032288316.1;Name=WP_032288316.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001300511.1;locus_tag=AC00_RS0125605;product=helix-turn-helix domain-containing protein;protein_id=WP_032288316.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 2626 5235 . + . ID=gene-AC00_RS06025;Name=AC00_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06025;old_locus_tag=AC00_3972 NZ_JJLU01000112.1 Protein Homology CDS 2626 5235 . + 0 ID=cds-WP_032288318.1;Parent=gene-AC00_RS06025;Dbxref=GenBank:WP_032288318.1;Name=WP_032288318.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001764269.1;locus_tag=AC00_RS06025;product=AAA family ATPase;protein_id=WP_032288318.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 5369 6061 . - . ID=gene-AC00_RS06020;Name=AC00_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS06020;old_locus_tag=AC00_3973 NZ_JJLU01000112.1 Protein Homology CDS 5369 6061 . - 0 ID=cds-WP_234696402.1;Parent=gene-AC00_RS06020;Dbxref=GenBank:WP_234696402.1;Name=WP_234696402.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015852.6;locus_tag=AC00_RS06020;product=glutathione synthetase;protein_id=WP_234696402.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 6158 6508 . + . ID=gene-AC00_RS0125610;Name=AC00_RS0125610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125610 NZ_JJLU01000112.1 Protein Homology CDS 6158 6508 . + 0 ID=cds-WP_032288320.1;Parent=gene-AC00_RS0125610;Dbxref=GenBank:WP_032288320.1;Name=WP_032288320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206664.1;locus_tag=AC00_RS0125610;product=transcriptional regulator;protein_id=WP_032288320.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 6555 6917 . + . ID=gene-AC00_RS06015;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=AC00_RS06015;old_locus_tag=AC00_3975 NZ_JJLU01000112.1 Protein Homology CDS 6555 6917 . + 0 ID=cds-WP_032288321.1;Parent=gene-AC00_RS06015;Dbxref=GenBank:WP_032288321.1;Name=WP_032288321.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855179.1;locus_tag=AC00_RS06015;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_032288321.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 6935 8686 . + . ID=gene-AC00_RS06010;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=AC00_RS06010;old_locus_tag=AC00_3976 NZ_JJLU01000112.1 Protein Homology CDS 6935 8686 . + 0 ID=cds-WP_032288322.1;Parent=gene-AC00_RS06010;Dbxref=GenBank:WP_032288322.1;Name=WP_032288322.1;gbkey=CDS;gene=arsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_131199602.1;locus_tag=AC00_RS06010;product=arsenite efflux transporter ATPase subunit ArsA;protein_id=WP_032288322.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 8734 10023 . + . ID=gene-AC00_RS06005;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=AC00_RS06005;old_locus_tag=AC00_3977 NZ_JJLU01000112.1 Protein Homology CDS 8734 10023 . + 0 ID=cds-WP_032288323.1;Parent=gene-AC00_RS06005;Dbxref=GenBank:WP_032288323.1;Name=WP_032288323.1;gbkey=CDS;gene=arsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=AC00_RS06005;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_032288323.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 10036 10461 . + . ID=gene-AC00_RS06000;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC00_RS06000;old_locus_tag=AC00_3978 NZ_JJLU01000112.1 Protein Homology CDS 10036 10461 . + 0 ID=cds-WP_032288324.1;Parent=gene-AC00_RS06000;Dbxref=GenBank:WP_032288324.1;Name=WP_032288324.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AC00_RS06000;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_032288324.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 10496 11032 . - . ID=gene-AC00_RS05995;Name=AC00_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05995;old_locus_tag=AC00_3979 NZ_JJLU01000112.1 Protein Homology CDS 10496 11032 . - 0 ID=cds-WP_032288325.1;Parent=gene-AC00_RS05995;Dbxref=GenBank:WP_032288325.1;Name=WP_032288325.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785735.1;locus_tag=AC00_RS05995;product=GNAT family N-acetyltransferase;protein_id=WP_032288325.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 11245 12069 . + . ID=gene-AC00_RS05990;Name=AC00_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05990;old_locus_tag=AC00_3980 NZ_JJLU01000112.1 Protein Homology CDS 11245 12069 . + 0 ID=cds-WP_032288327.1;Parent=gene-AC00_RS05990;Dbxref=GenBank:WP_032288327.1;Name=WP_032288327.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100193.1;locus_tag=AC00_RS05990;product=sulfite exporter TauE/SafE family protein;protein_id=WP_032288327.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 12132 12500 . + . ID=gene-AC00_RS0125615;Name=AC00_RS0125615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125615 NZ_JJLU01000112.1 Protein Homology CDS 12132 12500 . + 0 ID=cds-WP_050438662.1;Parent=gene-AC00_RS0125615;Dbxref=GenBank:WP_050438662.1;Name=WP_050438662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000799343.1;locus_tag=AC00_RS0125615;product=winged helix-turn-helix domain-containing protein;protein_id=WP_050438662.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 12574 14331 . - . ID=gene-AC00_RS05985;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=AC00_RS05985;old_locus_tag=AC00_3982 NZ_JJLU01000112.1 Protein Homology CDS 12574 14331 . - 0 ID=cds-WP_032288328.1;Parent=gene-AC00_RS05985;Dbxref=GenBank:WP_032288328.1;Name=WP_032288328.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001057013.1;locus_tag=AC00_RS05985;product=arsenical pump-driving ATPase;protein_id=WP_032288328.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 14352 14714 . - . ID=gene-AC00_RS05980;Name=AC00_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05980;old_locus_tag=AC00_3983 NZ_JJLU01000112.1 Protein Homology CDS 14352 14714 . - 0 ID=cds-WP_032288329.1;Parent=gene-AC00_RS05980;Dbxref=GenBank:WP_032288329.1;Name=WP_032288329.1;Ontology_term=GO:0045892,GO:0046685,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034287.1;locus_tag=AC00_RS05980;product=arsenic metallochaperone ArsD family protein;protein_id=WP_032288329.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 14790 15335 . - . ID=gene-AC00_RS0125620;Name=AC00_RS0125620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125620;old_locus_tag=AC00_3984 NZ_JJLU01000112.1 Protein Homology CDS 14790 15335 . - 0 ID=cds-WP_032288330.1;Parent=gene-AC00_RS0125620;Dbxref=GenBank:WP_032288330.1;Name=WP_032288330.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001286342.1;locus_tag=AC00_RS0125620;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_032288330.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 15344 16054 . - . ID=gene-AC00_RS05975;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=AC00_RS05975;old_locus_tag=AC00_3985 NZ_JJLU01000112.1 Protein Homology CDS 15344 16054 . - 0 ID=cds-WP_032288341.1;Parent=gene-AC00_RS05975;Dbxref=GenBank:WP_032288341.1;Name=WP_032288341.1;Ontology_term=GO:0046685;gbkey=CDS;gene=arsH;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095191.1;locus_tag=AC00_RS05975;product=arsenical resistance protein ArsH;protein_id=WP_032288341.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 16154 16477 . - . ID=gene-AC00_RS05970;Name=AC00_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05970;old_locus_tag=AC00_3986 NZ_JJLU01000112.1 Protein Homology CDS 16154 16477 . - 0 ID=cds-WP_032288331.1;Parent=gene-AC00_RS05970;Dbxref=GenBank:WP_032288331.1;Name=WP_032288331.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001175593.1;locus_tag=AC00_RS05970;product=ArsR/SmtB family transcription factor;protein_id=WP_032288331.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 16583 17716 . + . ID=gene-AC00_RS05965;Name=AC00_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05965;old_locus_tag=AC00_3987 NZ_JJLU01000112.1 Protein Homology CDS 16583 17716 . + 0 ID=cds-WP_032288332.1;Parent=gene-AC00_RS05965;Dbxref=GenBank:WP_032288332.1;Name=WP_032288332.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089730.1;locus_tag=AC00_RS05965;product=permease;protein_id=WP_032288332.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 18214 19518 . + . ID=gene-AC00_RS05960;Name=AC00_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05960;old_locus_tag=AC00_3988 NZ_JJLU01000112.1 Protein Homology CDS 18214 19518 . + 0 ID=cds-WP_032288333.1;Parent=gene-AC00_RS05960;Dbxref=GenBank:WP_032288333.1;Name=WP_032288333.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=AC00_RS05960;product=site-specific integrase;protein_id=WP_032288333.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 19511 20551 . + . ID=gene-AC00_RS26660;Name=AC00_RS26660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26660;old_locus_tag=AC00_3989 NZ_JJLU01000112.1 GeneMarkS-2+ CDS 19511 20551 . + 0 ID=cds-WP_050438663.1;Parent=gene-AC00_RS26660;Dbxref=GenBank:WP_050438663.1;Name=WP_050438663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS26660;product=hypothetical protein;protein_id=WP_050438663.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 20689 21234 . + . ID=gene-AC00_RS26665;Name=AC00_RS26665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26665 NZ_JJLU01000112.1 GeneMarkS-2+ CDS 20689 21234 . + 0 ID=cds-WP_050438664.1;Parent=gene-AC00_RS26665;Dbxref=GenBank:WP_050438664.1;Name=WP_050438664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS26665;product=hypothetical protein;protein_id=WP_050438664.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 21234 23033 . + . ID=gene-AC00_RS05955;Name=AC00_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05955;old_locus_tag=AC00_3990 NZ_JJLU01000112.1 GeneMarkS-2+ CDS 21234 23033 . + 0 ID=cds-WP_032288334.1;Parent=gene-AC00_RS05955;Dbxref=GenBank:WP_032288334.1;Name=WP_032288334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS05955;product=hypothetical protein;protein_id=WP_032288334.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 23073 23327 . + . ID=gene-AC00_RS0125630;Name=AC00_RS0125630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125630 NZ_JJLU01000112.1 GeneMarkS-2+ CDS 23073 23327 . + 0 ID=cds-WP_032288335.1;Parent=gene-AC00_RS0125630;Dbxref=GenBank:WP_032288335.1;Name=WP_032288335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0125630;product=hypothetical protein;protein_id=WP_032288335.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 23320 23775 . + . ID=gene-AC00_RS05950;Name=AC00_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05950;old_locus_tag=AC00_3991 NZ_JJLU01000112.1 GeneMarkS-2+ CDS 23320 23775 . + 0 ID=cds-WP_032288336.1;Parent=gene-AC00_RS05950;Dbxref=GenBank:WP_032288336.1;Name=WP_032288336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS05950;product=hypothetical protein;protein_id=WP_032288336.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 24548 24631 . - . ID=gene-AC00_RS05945;Name=dinQ;gbkey=Gene;gene=dinQ;gene_biotype=protein_coding;locus_tag=AC00_RS05945;old_locus_tag=AC00_3993 NZ_JJLU01000112.1 Protein Homology CDS 24548 24631 . - 0 ID=cds-WP_001295215.1;Parent=gene-AC00_RS05945;Dbxref=GenBank:WP_001295215.1;Name=WP_001295215.1;gbkey=CDS;gene=dinQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165328.2;locus_tag=AC00_RS05945;product=damage-inducible type I toxin DinQ;protein_id=WP_001295215.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 25165 25614 . + . ID=gene-AC00_RS05935;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC00_RS05935;old_locus_tag=AC00_3995 NZ_JJLU01000112.1 Protein Homology CDS 25165 25614 . + 0 ID=cds-WP_248790368.1;Parent=gene-AC00_RS05935;Dbxref=GenBank:WP_248790368.1;Name=WP_248790368.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417960.1;locus_tag=AC00_RS05935;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_248790368.1;transl_table=11 NZ_JJLU01000112.1 RefSeq gene 25549 25805 . - . ID=gene-AC00_RS28325;Name=AC00_RS28325;end_range=25805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28325;partial=true NZ_JJLU01000112.1 Protein Homology CDS 25549 25805 . - 2 ID=cds-WP_000474469.1-5;Parent=gene-AC00_RS28325;Dbxref=GenBank:WP_000474469.1;Name=WP_000474469.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=25805,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS28325;partial=true;product=IS1 family transposase;protein_id=WP_000474469.1;transl_table=11 ##sequence-region NZ_JJLU01000113.1 1 22603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000113.1 RefSeq region 1 22603 . + . ID=NZ_JJLU01000113.1:1..22603;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000113.1 RefSeq pseudogene 1 324 . - . ID=gene-AC00_RS0125635;Name=AC00_RS0125635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125635;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000113.1 Protein Homology CDS 1 324 . - 0 ID=cds-AC00_RS0125635;Parent=gene-AC00_RS0125635;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0125635;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 644 1210 . + . ID=gene-AC00_RS05930;Name=slp;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=AC00_RS05930;old_locus_tag=AC00_3997 NZ_JJLU01000113.1 Protein Homology CDS 644 1210 . + 0 ID=cds-WP_001057453.1;Parent=gene-AC00_RS05930;Dbxref=GenBank:WP_001057453.1;Name=WP_001057453.1;gbkey=CDS;gene=slp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312404.2;locus_tag=AC00_RS05930;product=outer membrane lipoprotein Slp;protein_id=WP_001057453.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 1366 1896 . + . ID=gene-AC00_RS05925;Name=dctR;gbkey=Gene;gene=dctR;gene_biotype=protein_coding;locus_tag=AC00_RS05925;old_locus_tag=AC00_3998 NZ_JJLU01000113.1 Protein Homology CDS 1366 1896 . + 0 ID=cds-WP_000478621.1;Parent=gene-AC00_RS05925;Dbxref=GenBank:WP_000478621.1;Name=WP_000478621.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=dctR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312405.1;locus_tag=AC00_RS05925;product=helix-turn-helix transcriptional regulator;protein_id=WP_000478621.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 1957 2985 . - . ID=gene-AC00_RS05920;Name=chuS;gbkey=Gene;gene=chuS;gene_biotype=protein_coding;locus_tag=AC00_RS05920;old_locus_tag=AC00_3999 NZ_JJLU01000113.1 Protein Homology CDS 1957 2985 . - 0 ID=cds-WP_032281773.1;Parent=gene-AC00_RS05920;Dbxref=GenBank:WP_032281773.1;Name=WP_032281773.1;gbkey=CDS;gene=chuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312406.1;locus_tag=AC00_RS05920;product=hematinate-forming heme oxygenase ChuS;protein_id=WP_032281773.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 3034 5016 . - . ID=gene-AC00_RS05915;Name=chuA;gbkey=Gene;gene=chuA;gene_biotype=protein_coding;gene_synonym=shuA;locus_tag=AC00_RS05915;old_locus_tag=AC00_4000 NZ_JJLU01000113.1 Protein Homology CDS 3034 5016 . - 0 ID=cds-WP_032281774.1;Parent=gene-AC00_RS05915;Dbxref=GenBank:WP_032281774.1;Name=WP_032281774.1;gbkey=CDS;gene=chuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312407.1;locus_tag=AC00_RS05915;product=TonB-dependent heme/hemoglobin receptor ChuA/ShuA;protein_id=WP_032281774.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 5699 6613 . + . ID=gene-AC00_RS05905;Name=shuT;gbkey=Gene;gene=shuT;gene_biotype=protein_coding;locus_tag=AC00_RS05905;old_locus_tag=AC00_4003 NZ_JJLU01000113.1 Protein Homology CDS 5699 6613 . + 0 ID=cds-WP_032281775.1;Parent=gene-AC00_RS05905;Dbxref=GenBank:WP_032281775.1;Name=WP_032281775.1;gbkey=CDS;gene=shuT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312409.3;locus_tag=AC00_RS05905;product=heme ABC transporter substrate-binding protein ShuT;protein_id=WP_032281775.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 6633 7970 . + . ID=gene-AC00_RS05900;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=AC00_RS05900;old_locus_tag=AC00_4004 NZ_JJLU01000113.1 Protein Homology CDS 6633 7970 . + 0 ID=cds-WP_032281776.1;Parent=gene-AC00_RS05900;Dbxref=GenBank:WP_032281776.1;Name=WP_032281776.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312410.1;locus_tag=AC00_RS05900;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_032281776.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 7983 8477 . + . ID=gene-AC00_RS05895;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=AC00_RS05895;old_locus_tag=AC00_4005 NZ_JJLU01000113.1 Protein Homology CDS 7983 8477 . + 0 ID=cds-WP_032281778.1;Parent=gene-AC00_RS05895;Dbxref=GenBank:WP_032281778.1;Name=WP_032281778.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312411.1;locus_tag=AC00_RS05895;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_032281778.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 8477 9100 . + . ID=gene-AC00_RS05890;Name=chuY;gbkey=Gene;gene=chuY;gene_biotype=protein_coding;locus_tag=AC00_RS05890;old_locus_tag=AC00_4006 NZ_JJLU01000113.1 Protein Homology CDS 8477 9100 . + 0 ID=cds-WP_032281780.1;Parent=gene-AC00_RS05890;Dbxref=GenBank:WP_032281780.1;Name=WP_032281780.1;gbkey=CDS;gene=chuY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312412.1;locus_tag=AC00_RS05890;product=anaerobilin reductase;protein_id=WP_032281780.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 9149 10141 . + . ID=gene-AC00_RS05885;Name=shuU;gbkey=Gene;gene=shuU;gene_biotype=protein_coding;gene_synonym=chuU;locus_tag=AC00_RS05885;old_locus_tag=AC00_4007 NZ_JJLU01000113.1 Protein Homology CDS 9149 10141 . + 0 ID=cds-WP_032281781.1;Parent=gene-AC00_RS05885;Dbxref=GenBank:WP_032281781.1;Name=WP_032281781.1;gbkey=CDS;gene=shuU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000910402.1;locus_tag=AC00_RS05885;product=heme ABC transporter permease ShuU/ChuU;protein_id=WP_032281781.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 10138 10908 . + . ID=gene-AC00_RS05880;Name=AC00_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05880;old_locus_tag=AC00_4008 NZ_JJLU01000113.1 Protein Homology CDS 10138 10908 . + 0 ID=cds-WP_032281782.1;Parent=gene-AC00_RS05880;Dbxref=GenBank:WP_032281782.1;Name=WP_032281782.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312414.1;locus_tag=AC00_RS05880;product=heme ABC transporter ATP-binding protein;protein_id=WP_032281782.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 10960 11607 . - . ID=gene-AC00_RS05875;Name=yhiD;gbkey=Gene;gene=yhiD;gene_biotype=protein_coding;locus_tag=AC00_RS05875;old_locus_tag=AC00_4009 NZ_JJLU01000113.1 Protein Homology CDS 10960 11607 . - 0 ID=cds-WP_024216292.1;Parent=gene-AC00_RS05875;Dbxref=GenBank:WP_024216292.1;Name=WP_024216292.1;gbkey=CDS;gene=yhiD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417965.1;locus_tag=AC00_RS05875;product=MgtC/SapB family protein;protein_id=WP_024216292.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 11671 11997 . - . ID=gene-AC00_RS05870;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=AC00_RS05870;old_locus_tag=AC00_4010 NZ_JJLU01000113.1 Protein Homology CDS 11671 11997 . - 0 ID=cds-WP_001298717.1;Parent=gene-AC00_RS05870;Dbxref=GenBank:WP_001298717.1;Name=WP_001298717.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417966.4;locus_tag=AC00_RS05870;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_001298717.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 12113 12445 . - . ID=gene-AC00_RS05865;Name=hdeA;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=AC00_RS05865;old_locus_tag=AC00_4011 NZ_JJLU01000113.1 Protein Homology CDS 12113 12445 . - 0 ID=cds-WP_000756550.1;Parent=gene-AC00_RS05865;Dbxref=GenBank:WP_000756550.1;Name=WP_000756550.1;gbkey=CDS;gene=hdeA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312417.1;locus_tag=AC00_RS05865;product=acid-activated periplasmic chaperone HdeA;protein_id=WP_000756550.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 12700 13272 . + . ID=gene-AC00_RS05860;Name=hdeD;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=AC00_RS05860;old_locus_tag=AC00_4012 NZ_JJLU01000113.1 Protein Homology CDS 12700 13272 . + 0 ID=cds-WP_000965672.1;Parent=gene-AC00_RS05860;Dbxref=GenBank:WP_000965672.1;Name=WP_000965672.1;gbkey=CDS;gene=hdeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312418.1;locus_tag=AC00_RS05860;product=acid-resistance protein HdeD;protein_id=WP_000965672.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 14070 14597 . + . ID=gene-AC00_RS05855;Name=gadE;gbkey=Gene;gene=gadE;gene_biotype=protein_coding;locus_tag=AC00_RS05855;old_locus_tag=AC00_4013 NZ_JJLU01000113.1 Protein Homology CDS 14070 14597 . + 0 ID=cds-WP_032281783.1;Parent=gene-AC00_RS05855;Dbxref=GenBank:WP_032281783.1;Name=WP_032281783.1;gbkey=CDS;gene=gadE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312419.1;locus_tag=AC00_RS05855;product=acid resistance transcriptional activator GadE;protein_id=WP_032281783.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 14598 14876 . - . ID=gene-AC00_RS0125640;Name=AC00_RS0125640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125640 NZ_JJLU01000113.1 Protein Homology CDS 14598 14876 . - 0 ID=cds-WP_001205329.1;Parent=gene-AC00_RS0125640;Dbxref=GenBank:WP_001205329.1;Name=WP_001205329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008439288.1;locus_tag=AC00_RS0125640;product=hypothetical protein;protein_id=WP_001205329.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 14984 16093 . + . ID=gene-AC00_RS05850;Name=mdtE;gbkey=Gene;gene=mdtE;gene_biotype=protein_coding;locus_tag=AC00_RS05850;old_locus_tag=AC00_4014 NZ_JJLU01000113.1 Protein Homology CDS 14984 16093 . + 0 ID=cds-WP_001340474.1;Parent=gene-AC00_RS05850;Dbxref=GenBank:WP_001340474.1;Name=WP_001340474.1;gbkey=CDS;gene=mdtE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081792.1;locus_tag=AC00_RS05850;product=multidrug transporter subunit MdtE;protein_id=WP_001340474.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 16118 19231 . + . ID=gene-AC00_RS05845;Name=mdtF;gbkey=Gene;gene=mdtF;gene_biotype=protein_coding;locus_tag=AC00_RS05845;old_locus_tag=AC00_4015 NZ_JJLU01000113.1 Protein Homology CDS 16118 19231 . + 0 ID=cds-WP_032281784.1;Parent=gene-AC00_RS05845;Dbxref=GenBank:WP_032281784.1;Name=WP_032281784.1;gbkey=CDS;gene=mdtF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417971.1;locus_tag=AC00_RS05845;product=multidrug efflux pump RND permease MdtF;protein_id=WP_032281784.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 19594 20322 . - . ID=gene-AC00_RS05840;Name=gadW;gbkey=Gene;gene=gadW;gene_biotype=protein_coding;locus_tag=AC00_RS05840;old_locus_tag=AC00_4016 NZ_JJLU01000113.1 Protein Homology CDS 19594 20322 . - 0 ID=cds-WP_000149999.1;Parent=gene-AC00_RS05840;Dbxref=GenBank:WP_000149999.1;Name=WP_000149999.1;gbkey=CDS;gene=gadW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312422.1;locus_tag=AC00_RS05840;product=acid resistance transcriptional activator GadW;protein_id=WP_000149999.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 20690 21514 . - . ID=gene-AC00_RS05835;Name=gadX;gbkey=Gene;gene=gadX;gene_biotype=protein_coding;locus_tag=AC00_RS05835;old_locus_tag=AC00_4017 NZ_JJLU01000113.1 Protein Homology CDS 20690 21514 . - 0 ID=cds-WP_032281785.1;Parent=gene-AC00_RS05835;Dbxref=GenBank:WP_032281785.1;Name=WP_032281785.1;gbkey=CDS;gene=gadX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312423.1;locus_tag=AC00_RS05835;product=acid resistance transcriptional activator GadX;protein_id=WP_032281785.1;transl_table=11 NZ_JJLU01000113.1 RefSeq gene 21885 22603 . - . ID=gene-AC00_RS05830;Name=AC00_RS05830;end_range=22603,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05830;old_locus_tag=AC00_4018;partial=true NZ_JJLU01000113.1 Protein Homology CDS 21885 22603 . - 2 ID=cds-WP_032288343.1;Parent=gene-AC00_RS05830;Dbxref=GenBank:WP_032288343.1;Name=WP_032288343.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;end_range=22603,.;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310125.1;locus_tag=AC00_RS05830;partial=true;product=pyridoxal-dependent decarboxylase;protein_id=WP_032288343.1;transl_table=11 ##sequence-region NZ_JJLU01000114.1 1 13134 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000114.1 RefSeq region 1 13134 . + . ID=NZ_JJLU01000114.1:1..13134;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000114.1 RefSeq gene 1 1297 . - . ID=gene-AC00_RS05825;Name=gadA;gbkey=Gene;gene=gadA;gene_biotype=protein_coding;locus_tag=AC00_RS05825;old_locus_tag=AC00_4019;partial=true;start_range=.,1 NZ_JJLU01000114.1 Protein Homology CDS 1 1297 . - 0 ID=cds-WP_032288344.1;Parent=gene-AC00_RS05825;Dbxref=GenBank:WP_032288344.1;Name=WP_032288344.1;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gadA;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyrate shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312424.1;locus_tag=AC00_RS05825;partial=true;product=glutamate decarboxylase;protein_id=WP_032288344.1;start_range=.,1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 1508 2905 . - . ID=gene-AC00_RS05820;Name=ccp;gbkey=Gene;gene=ccp;gene_biotype=protein_coding;locus_tag=AC00_RS05820;old_locus_tag=AC00_4020 NZ_JJLU01000114.1 Protein Homology CDS 1508 2905 . - 0 ID=cds-WP_000784815.1;Parent=gene-AC00_RS05820;Dbxref=GenBank:WP_000784815.1;Name=WP_000784815.1;gbkey=CDS;gene=ccp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312425.1;locus_tag=AC00_RS05820;product=cytochrome c peroxidase;protein_id=WP_000784815.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 3310 4959 . + . ID=gene-AC00_RS05815;Name=treF;gbkey=Gene;gene=treF;gene_biotype=protein_coding;locus_tag=AC00_RS05815;old_locus_tag=AC00_4021 NZ_JJLU01000114.1 Protein Homology CDS 3310 4959 . + 0 ID=cds-WP_000934216.1;Parent=gene-AC00_RS05815;Dbxref=GenBank:WP_000934216.1;Name=WP_000934216.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;gene=treF;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312426.1;locus_tag=AC00_RS05815;product=alpha%2Calpha-trehalase;protein_id=WP_000934216.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 5010 5612 . - . ID=gene-AC00_RS05810;Name=yhjB;gbkey=Gene;gene=yhjB;gene_biotype=protein_coding;locus_tag=AC00_RS05810;old_locus_tag=AC00_4022 NZ_JJLU01000114.1 Protein Homology CDS 5010 5612 . - 0 ID=cds-WP_001167676.1;Parent=gene-AC00_RS05810;Dbxref=GenBank:WP_001167676.1;Name=WP_001167676.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=yhjB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417977.1;locus_tag=AC00_RS05810;product=helix-turn-helix transcriptional regulator;protein_id=WP_001167676.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 6132 7031 . + . ID=gene-AC00_RS05805;Name=rcdB;gbkey=Gene;gene=rcdB;gene_biotype=protein_coding;locus_tag=AC00_RS05805;old_locus_tag=AC00_4024 NZ_JJLU01000114.1 Protein Homology CDS 6132 7031 . + 0 ID=cds-WP_001383633.1;Parent=gene-AC00_RS05805;Dbxref=GenBank:WP_001383633.1;Name=WP_001383633.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=rcdB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417978.2;locus_tag=AC00_RS05805;product=LysR family transcriptional regulator;protein_id=WP_001383633.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 7080 8093 . + . ID=gene-AC00_RS05800;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=AC00_RS05800;old_locus_tag=AC00_4025 NZ_JJLU01000114.1 Protein Homology CDS 7080 8093 . + 0 ID=cds-WP_021557300.1;Parent=gene-AC00_RS05800;Dbxref=GenBank:WP_021557300.1;Name=WP_021557300.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312429.1;locus_tag=AC00_RS05800;product=inner membrane protein YhjD;protein_id=WP_021557300.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 8486 9808 . + . ID=gene-AC00_RS05795;Name=yhjE;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=AC00_RS05795;old_locus_tag=AC00_4026 NZ_JJLU01000114.1 Protein Homology CDS 8486 9808 . + 0 ID=cds-WP_001149003.1;Parent=gene-AC00_RS05795;Dbxref=GenBank:WP_001149003.1;Name=WP_001149003.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yhjE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417980.1;locus_tag=AC00_RS05795;product=MFS transporter;protein_id=WP_001149003.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 9990 12047 . - . ID=gene-AC00_RS05790;Name=yhjG;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=AC00_RS05790;old_locus_tag=AC00_4027 NZ_JJLU01000114.1 Protein Homology CDS 9990 12047 . - 0 ID=cds-WP_032280870.1;Parent=gene-AC00_RS05790;Dbxref=GenBank:WP_032280870.1;Name=WP_032280870.1;gbkey=CDS;gene=yhjG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417981.2;locus_tag=AC00_RS05790;product=AsmA family protein;protein_id=WP_032280870.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 12117 12884 . - . ID=gene-AC00_RS0125645;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=AC00_RS0125645;old_locus_tag=AC00_4028 NZ_JJLU01000114.1 Protein Homology CDS 12117 12884 . - 0 ID=cds-WP_032280871.1;Parent=gene-AC00_RS0125645;Dbxref=GenBank:WP_032280871.1;Name=WP_032280871.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417982.2;locus_tag=AC00_RS0125645;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_032280871.1;transl_table=11 NZ_JJLU01000114.1 RefSeq gene 13038 13134 . + . ID=gene-AC00_RS31335;Name=AC00_RS31335;end_range=13134,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31335;old_locus_tag=AC00_4030;partial=true NZ_JJLU01000114.1 Protein Homology CDS 13038 13134 . + 0 ID=cds-WP_001425824.1-3;Parent=gene-AC00_RS31335;Dbxref=GenBank:WP_001425824.1;Name=WP_001425824.1;end_range=13134,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS31335;partial=true;product=hypothetical protein;protein_id=WP_001425824.1;transl_table=11 ##sequence-region NZ_JJLU01000115.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000115.1 RefSeq region 1 477 . + . ID=NZ_JJLU01000115.1:1..477;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000115.1 RefSeq gene 262 369 . - . ID=gene-AC00_RS29800;Name=AC00_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29800 NZ_JJLU01000115.1 Protein Homology CDS 262 369 . - 0 ID=cds-WP_001295224.1;Parent=gene-AC00_RS29800;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AC00_RS29800;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 ##sequence-region NZ_JJLU01000116.1 1 36684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000116.1 RefSeq region 1 36684 . + . ID=NZ_JJLU01000116.1:1..36684;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000116.1 RefSeq pseudogene 1 161 . + . ID=gene-AC00_RS05775;Name=AC00_RS05775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS05775;old_locus_tag=AC00_4033;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000116.1 Protein Homology CDS 1 161 . + 2 ID=cds-AC00_RS05775;Parent=gene-AC00_RS05775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS05775;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 477 1406 . + . ID=gene-AC00_RS05770;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=AC00_RS05770;old_locus_tag=AC00_4035 NZ_JJLU01000116.1 Protein Homology CDS 477 1406 . + 0 ID=cds-WP_001308127.1;Parent=gene-AC00_RS05770;Dbxref=GenBank:WP_001308127.1;Name=WP_001308127.1;gbkey=CDS;gene=kdgK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417983.2;locus_tag=AC00_RS05770;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_001308127.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 1502 2998 . - . ID=gene-AC00_RS05765;Name=yhjJ;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=AC00_RS05765;old_locus_tag=AC00_4036 NZ_JJLU01000116.1 Protein Homology CDS 1502 2998 . - 0 ID=cds-WP_003600790.1;Parent=gene-AC00_RS05765;Dbxref=GenBank:WP_003600790.1;Name=WP_003600790.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;gene=yhjJ;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312434.1;locus_tag=AC00_RS05765;product=M16 family metallopeptidase;protein_id=WP_003600790.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 3219 4505 . - . ID=gene-AC00_RS05760;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=AC00_RS05760;old_locus_tag=AC00_4037 NZ_JJLU01000116.1 Protein Homology CDS 3219 4505 . - 0 ID=cds-WP_024171136.1;Parent=gene-AC00_RS05760;Dbxref=GenBank:WP_024171136.1;Name=WP_024171136.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417985.1;locus_tag=AC00_RS05760;product=C4-dicarboxylate transporter DctC;protein_id=WP_024171136.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 4688 6676 . - . ID=gene-AC00_RS05755;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=AC00_RS05755;old_locus_tag=AC00_4038 NZ_JJLU01000116.1 Protein Homology CDS 4688 6676 . - 0 ID=cds-WP_001266317.1;Parent=gene-AC00_RS05755;Dbxref=GenBank:WP_001266317.1;Name=WP_001266317.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417986.4;locus_tag=AC00_RS05755;product=biofilm formation regulator HmsP;protein_id=WP_001266317.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 6758 10231 . - . ID=gene-AC00_RS05750;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=AC00_RS05750;old_locus_tag=AC00_4039 NZ_JJLU01000116.1 Protein Homology CDS 6758 10231 . - 0 ID=cds-WP_032288347.1;Parent=gene-AC00_RS05750;Dbxref=GenBank:WP_032288347.1;Name=WP_032288347.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=AC00_RS05750;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_032288347.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 10213 11319 . - . ID=gene-AC00_RS05745;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=AC00_RS05745;old_locus_tag=AC00_4040 NZ_JJLU01000116.1 Protein Homology CDS 10213 11319 . - 0 ID=cds-WP_001295222.1;Parent=gene-AC00_RS05745;Dbxref=GenBank:WP_001295222.1;Name=WP_001295222.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312438.1;locus_tag=AC00_RS05745;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_001295222.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 11326 13665 . - . ID=gene-AC00_RS05740;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=AC00_RS05740;old_locus_tag=AC00_4041 NZ_JJLU01000116.1 Protein Homology CDS 11326 13665 . - 0 ID=cds-WP_032281804.1;Parent=gene-AC00_RS05740;Dbxref=GenBank:WP_032281804.1;Name=WP_032281804.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=AC00_RS05740;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_032281804.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 13676 16294 . - . ID=gene-AC00_RS05735;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=AC00_RS05735;old_locus_tag=AC00_4042 NZ_JJLU01000116.1 Protein Homology CDS 13676 16294 . - 0 ID=cds-WP_000025892.1;Parent=gene-AC00_RS05735;Dbxref=GenBank:WP_000025892.1;Name=WP_000025892.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=AC00_RS05735;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_000025892.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 16291 17043 . - . ID=gene-AC00_RS05730;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=AC00_RS05730;old_locus_tag=AC00_4043 NZ_JJLU01000116.1 Protein Homology CDS 16291 17043 . - 0 ID=cds-WP_000279541.1;Parent=gene-AC00_RS05730;Dbxref=GenBank:WP_000279541.1;Name=WP_000279541.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709309.1;locus_tag=AC00_RS05730;product=cellulose biosynthesis protein BcsQ;protein_id=WP_000279541.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 17055 17243 . - . ID=gene-AC00_RS05725;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=AC00_RS05725;old_locus_tag=AC00_4044 NZ_JJLU01000116.1 Protein Homology CDS 17055 17243 . - 0 ID=cds-WP_001063314.1;Parent=gene-AC00_RS05725;Dbxref=GenBank:WP_001063314.1;Name=WP_001063314.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312442.1;locus_tag=AC00_RS05725;product=cellulose biosynthesis protein BcsR;protein_id=WP_001063314.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 17516 19087 . + . ID=gene-AC00_RS05720;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=AC00_RS05720;old_locus_tag=AC00_4045 NZ_JJLU01000116.1 Protein Homology CDS 17516 19087 . + 0 ID=cds-WP_077757424.1;Parent=gene-AC00_RS05720;Dbxref=GenBank:WP_077757424.1;Name=WP_077757424.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709312.1;locus_tag=AC00_RS05720;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_077757424.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 19084 19275 . + . ID=gene-AC00_RS05715;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=AC00_RS05715;old_locus_tag=AC00_4046 NZ_JJLU01000116.1 Protein Homology CDS 19084 19275 . + 0 ID=cds-WP_000988308.1;Parent=gene-AC00_RS05715;Dbxref=GenBank:WP_000988308.1;Name=WP_000988308.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417994.2;locus_tag=AC00_RS05715;product=cellulose biosynthesis protein BcsF;protein_id=WP_000988308.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 19272 20951 . + . ID=gene-AC00_RS05710;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=AC00_RS05710;old_locus_tag=AC00_4047 NZ_JJLU01000116.1 Protein Homology CDS 19272 20951 . + 0 ID=cds-WP_032281808.1;Parent=gene-AC00_RS05710;Dbxref=GenBank:WP_032281808.1;Name=WP_032281808.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312445.1;locus_tag=AC00_RS05710;product=cellulose biosynthesis protein BcsG;protein_id=WP_032281808.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 21038 21145 . - . ID=gene-AC00_RS29810;Name=ldrD;gbkey=Gene;gene=ldrD;gene_biotype=protein_coding;locus_tag=AC00_RS29810 NZ_JJLU01000116.1 Protein Homology CDS 21038 21145 . - 0 ID=cds-WP_001295224.1-2;Parent=gene-AC00_RS29810;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;gene=ldrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AC00_RS29810;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 21521 21628 . - . ID=gene-AC00_RS30540;Name=AC00_RS30540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30540 NZ_JJLU01000116.1 Protein Homology CDS 21521 21628 . - 0 ID=cds-WP_001295224.1-3;Parent=gene-AC00_RS30540;Dbxref=GenBank:WP_001295224.1;Name=WP_001295224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502657.1;locus_tag=AC00_RS30540;product=type I toxin-antitoxin system toxin Ldr family protein;protein_id=WP_001295224.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 22104 23375 . + . ID=gene-AC00_RS05690;Name=yhjV;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=AC00_RS05690;old_locus_tag=AC00_4052 NZ_JJLU01000116.1 Protein Homology CDS 22104 23375 . + 0 ID=cds-WP_001313380.1;Parent=gene-AC00_RS05690;Dbxref=GenBank:WP_001313380.1;Name=WP_001313380.1;gbkey=CDS;gene=yhjV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312446.1;locus_tag=AC00_RS05690;product=aromatic amino acid transport family protein;protein_id=WP_001313380.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 23405 24409 . - . ID=gene-AC00_RS05685;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AC00_RS05685;old_locus_tag=AC00_4053 NZ_JJLU01000116.1 Protein Homology CDS 23405 24409 . - 0 ID=cds-WP_000107036.1;Parent=gene-AC00_RS05685;Dbxref=GenBank:WP_000107036.1;Name=WP_000107036.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312447.1;locus_tag=AC00_RS05685;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_000107036.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 24406 25389 . - . ID=gene-AC00_RS05680;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AC00_RS05680;old_locus_tag=AC00_4054 NZ_JJLU01000116.1 Protein Homology CDS 24406 25389 . - 0 ID=cds-WP_001196486.1;Parent=gene-AC00_RS05680;Dbxref=GenBank:WP_001196486.1;Name=WP_001196486.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=AC00_RS05680;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_001196486.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 25400 26302 . - . ID=gene-AC00_RS05675;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=AC00_RS05675;old_locus_tag=AC00_4055 NZ_JJLU01000116.1 Protein Homology CDS 25400 26302 . - 0 ID=cds-WP_000084677.1;Parent=gene-AC00_RS05675;Dbxref=GenBank:WP_000084677.1;Name=WP_000084677.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=AC00_RS05675;product=dipeptide ABC transporter permease DppC;protein_id=WP_000084677.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 26312 27331 . - . ID=gene-AC00_RS05670;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=AC00_RS05670;old_locus_tag=AC00_4056 NZ_JJLU01000116.1 Protein Homology CDS 26312 27331 . - 0 ID=cds-WP_000938855.1;Parent=gene-AC00_RS05670;Dbxref=GenBank:WP_000938855.1;Name=WP_000938855.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=AC00_RS05670;product=dipeptide ABC transporter permease DppB;protein_id=WP_000938855.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 27349 27576 . + . ID=gene-AC00_RS30960;Name=AC00_RS30960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30960 NZ_JJLU01000116.1 GeneMarkS-2+ CDS 27349 27576 . + 0 ID=cds-WP_032149962.1;Parent=gene-AC00_RS30960;Dbxref=GenBank:WP_032149962.1;Name=WP_032149962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS30960;product=hypothetical protein;protein_id=WP_032149962.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 27639 29246 . - . ID=gene-AC00_RS05665;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=AC00_RS05665;old_locus_tag=AC00_4058 NZ_JJLU01000116.1 Protein Homology CDS 27639 29246 . - 0 ID=cds-WP_001222888.1;Parent=gene-AC00_RS05665;Dbxref=GenBank:WP_001222888.1;Name=WP_001222888.1;gbkey=CDS;gene=dppA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312451.1;locus_tag=AC00_RS05665;product=dipeptide ABC transporter substrate-binding protein DppA;protein_id=WP_001222888.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 29999 30075 . - . ID=gene-AC00_RS05660;Name=AC00_RS05660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS05660;old_locus_tag=AC00_4060 NZ_JJLU01000116.1 tRNAscan-SE tRNA 29999 30075 . - . ID=rna-AC00_RS05660;Parent=gene-AC00_RS05660;anticodon=(pos:complement(30039..30041));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS05660;product=tRNA-Pro NZ_JJLU01000116.1 tRNAscan-SE exon 29999 30075 . - . ID=exon-AC00_RS05660-1;Parent=rna-AC00_RS05660;anticodon=(pos:complement(30039..30041));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS05660;product=tRNA-Pro NZ_JJLU01000116.1 RefSeq gene 30167 31858 . - . ID=gene-AC00_RS05655;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=AC00_RS05655;old_locus_tag=AC00_4061 NZ_JJLU01000116.1 Protein Homology CDS 30167 31858 . - 0 ID=cds-WP_001269210.1;Parent=gene-AC00_RS05655;Dbxref=GenBank:WP_001269210.1;Name=WP_001269210.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312452.3;locus_tag=AC00_RS05655;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_001269210.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 32113 32643 . - . ID=gene-AC00_RS05650;Name=lpfE;gbkey=Gene;gene=lpfE;gene_biotype=protein_coding;locus_tag=AC00_RS05650;old_locus_tag=AC00_4062 NZ_JJLU01000116.1 Protein Homology CDS 32113 32643 . - 0 ID=cds-WP_000671278.1;Parent=gene-AC00_RS05650;Dbxref=GenBank:WP_000671278.1;Name=WP_000671278.1;gbkey=CDS;gene=lpfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312453.1;locus_tag=AC00_RS05650;product=long polar fimbrial protein LpfE;protein_id=WP_000671278.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 32648 33709 . - . ID=gene-AC00_RS05645;Name=AC00_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05645;old_locus_tag=AC00_4063 NZ_JJLU01000116.1 Protein Homology CDS 32648 33709 . - 0 ID=cds-WP_032281809.1;Parent=gene-AC00_RS05645;Dbxref=GenBank:WP_032281809.1;Name=WP_032281809.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312454.1;locus_tag=AC00_RS05645;product=fimbrial protein;protein_id=WP_032281809.1;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 33724 36297 . - . ID=gene-AC00_RS0125660;Name=lpfC;gbkey=Gene;gene=lpfC;gene_biotype=protein_coding;locus_tag=AC00_RS0125660 NZ_JJLU01000116.1 Protein Homology CDS 33724 36297 . - 0 ID=cds-WP_032281810.1;Parent=gene-AC00_RS0125660;Dbxref=GenBank:WP_032281810.1;Name=WP_032281810.1;gbkey=CDS;gene=lpfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000088424.1;locus_tag=AC00_RS0125660;product=outer membrane usher protein LpfC;protein_id=WP_032281810.1;transl_table=11 NZ_JJLU01000116.1 RefSeq pseudogene 36326 36400 . - . ID=gene-AC00_RS29820;Name=AC00_RS29820;end_range=36400,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29820;partial=true;pseudo=true NZ_JJLU01000116.1 Protein Homology CDS 36326 36400 . - 0 ID=cds-AC00_RS29820;Parent=gene-AC00_RS29820;Note=binds with fimbrial subunit LpfA%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=36400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312457.3;locus_tag=AC00_RS29820;partial=true;product=long polar fimbrial chaperone LpfB;pseudo=true;transl_table=11 NZ_JJLU01000116.1 RefSeq gene 36441 36684 . + . ID=gene-AC00_RS05640;Name=AC00_RS05640;end_range=36684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05640;old_locus_tag=AC00_4066;partial=true NZ_JJLU01000116.1 Protein Homology CDS 36441 36684 . + 0 ID=cds-WP_001530252.1-2;Parent=gene-AC00_RS05640;Dbxref=GenBank:WP_001530252.1;Name=WP_001530252.1;end_range=36684,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC00_RS05640;partial=true;product=IS1-like element transposase;protein_id=WP_001530252.1;transl_table=11 ##sequence-region NZ_JJLU01000117.1 1 20886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000117.1 RefSeq region 1 20886 . + . ID=NZ_JJLU01000117.1:1..20886;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000117.1 RefSeq gene 1 268 . + . ID=gene-AC00_RS28375;Name=AC00_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28375;partial=true;start_range=.,1 NZ_JJLU01000117.1 Protein Homology CDS 1 268 . + 1 ID=cds-WP_000212398.1-3;Parent=gene-AC00_RS28375;Dbxref=GenBank:WP_000212398.1;Name=WP_000212398.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014654019.1;locus_tag=AC00_RS28375;partial=true;product=IS1 family transposase;protein_id=WP_000212398.1;start_range=.,1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 203 919 . - . ID=gene-AC00_RS05635;Name=lpfB;gbkey=Gene;gene=lpfB;gene_biotype=protein_coding;locus_tag=AC00_RS05635;old_locus_tag=AC00_4067 NZ_JJLU01000117.1 Protein Homology CDS 203 919 . - 0 ID=cds-WP_050438665.1;Parent=gene-AC00_RS05635;Dbxref=GenBank:WP_050438665.1;Name=WP_050438665.1;gbkey=CDS;gene=lpfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312457.3;locus_tag=AC00_RS05635;product=long polar fimbrial biogenesis chaperone LpfB;protein_id=WP_050438665.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 984 1508 . - . ID=gene-AC00_RS05630;Name=lpfA1;gbkey=Gene;gene=lpfA1;gene_biotype=protein_coding;locus_tag=AC00_RS05630;old_locus_tag=AC00_4068 NZ_JJLU01000117.1 Protein Homology CDS 984 1508 . - 0 ID=cds-WP_032281812.1;Parent=gene-AC00_RS05630;Dbxref=GenBank:WP_032281812.1;Name=WP_032281812.1;gbkey=CDS;gene=lpfA1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312458.2;locus_tag=AC00_RS05630;product=long polar fimbria major subunit LpfA1;protein_id=WP_032281812.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 1849 3051 . - . ID=gene-AC00_RS05625;Name=yhjX;gbkey=Gene;gene=yhjX;gene_biotype=protein_coding;locus_tag=AC00_RS05625;old_locus_tag=AC00_4069 NZ_JJLU01000117.1 Protein Homology CDS 1849 3051 . - 0 ID=cds-WP_032281813.1;Parent=gene-AC00_RS05625;Dbxref=GenBank:WP_032281813.1;Name=WP_032281813.1;Ontology_term=GO:0015129;gbkey=CDS;gene=yhjX;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312459.1;locus_tag=AC00_RS05625;product=L-lactate MFS transporter;protein_id=WP_032281813.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 3280 3978 . - . ID=gene-AC00_RS05620;Name=yhjY;gbkey=Gene;gene=yhjY;gene_biotype=protein_coding;locus_tag=AC00_RS05620;old_locus_tag=AC00_4070 NZ_JJLU01000117.1 Protein Homology CDS 3280 3978 . - 0 ID=cds-WP_000584472.1;Parent=gene-AC00_RS05620;Dbxref=GenBank:WP_000584472.1;Name=WP_000584472.1;gbkey=CDS;gene=yhjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312460.2;locus_tag=AC00_RS05620;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_000584472.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 4136 4699 . + . ID=gene-AC00_RS05615;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=AC00_RS05615;old_locus_tag=AC00_4071 NZ_JJLU01000117.1 Protein Homology CDS 4136 4699 . + 0 ID=cds-WP_000438941.1;Parent=gene-AC00_RS05615;Dbxref=GenBank:WP_000438941.1;Name=WP_000438941.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312461.1;locus_tag=AC00_RS05615;product=DNA-3-methyladenine glycosylase I;protein_id=WP_000438941.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 4696 5136 . + . ID=gene-AC00_RS05610;Name=yiaC;gbkey=Gene;gene=yiaC;gene_biotype=protein_coding;locus_tag=AC00_RS05610;old_locus_tag=AC00_4072 NZ_JJLU01000117.1 Protein Homology CDS 4696 5136 . + 0 ID=cds-WP_000617485.1;Parent=gene-AC00_RS05610;Dbxref=GenBank:WP_000617485.1;Name=WP_000617485.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yiaC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418006.1;locus_tag=AC00_RS05610;product=N-acetyltransferase;protein_id=WP_000617485.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 5105 7438 . - . ID=gene-AC00_RS05605;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=AC00_RS05605;old_locus_tag=AC00_4073 NZ_JJLU01000117.1 Protein Homology CDS 5105 7438 . - 0 ID=cds-WP_071999276.1;Parent=gene-AC00_RS05605;Dbxref=GenBank:WP_071999276.1;Name=WP_071999276.1;gbkey=CDS;gene=bisC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312463.2;locus_tag=AC00_RS05605;product=biotin sulfoxide reductase;protein_id=WP_071999276.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 7591 8250 . + . ID=gene-AC00_RS05600;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=AC00_RS05600;old_locus_tag=AC00_4074 NZ_JJLU01000117.1 Protein Homology CDS 7591 8250 . + 0 ID=cds-WP_000747625.1;Parent=gene-AC00_RS05600;Dbxref=GenBank:WP_000747625.1;Name=WP_000747625.1;Ontology_term=GO:0009279;gbkey=CDS;gene=yiaD;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312464.1;locus_tag=AC00_RS05600;product=OmpA family lipoprotein;protein_id=WP_000747625.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 8354 9328 . + . ID=gene-AC00_RS05595;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=AC00_RS05595;old_locus_tag=AC00_4075 NZ_JJLU01000117.1 Protein Homology CDS 8354 9328 . + 0 ID=cds-WP_000805011.1;Parent=gene-AC00_RS05595;Dbxref=GenBank:WP_000805011.1;Name=WP_000805011.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312465.2;locus_tag=AC00_RS05595;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_000805011.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 9378 10088 . - . ID=gene-AC00_RS05590;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=AC00_RS05590;old_locus_tag=AC00_4076 NZ_JJLU01000117.1 Protein Homology CDS 9378 10088 . - 0 ID=cds-WP_000190516.1;Parent=gene-AC00_RS05590;Dbxref=GenBank:WP_000190516.1;Name=WP_000190516.1;gbkey=CDS;gene=yiaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418010.2;locus_tag=AC00_RS05590;product=DUF3053 domain-containing protein;protein_id=WP_000190516.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 10522 10812 . + . ID=gene-AC00_RS05585;Name=yiaG;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=AC00_RS05585;old_locus_tag=AC00_4078 NZ_JJLU01000117.1 Protein Homology CDS 10522 10812 . + 0 ID=cds-WP_032281815.1;Parent=gene-AC00_RS05585;Dbxref=GenBank:WP_032281815.1;Name=WP_032281815.1;gbkey=CDS;gene=yiaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312467.1;locus_tag=AC00_RS05585;product=HTH-type transcriptional regulator;protein_id=WP_032281815.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 11093 11305 . + . ID=gene-AC00_RS05580;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=AC00_RS05580;old_locus_tag=AC00_4079 NZ_JJLU01000117.1 Protein Homology CDS 11093 11305 . + 0 ID=cds-WP_000014594.1;Parent=gene-AC00_RS05580;Dbxref=GenBank:WP_000014594.1;Name=WP_000014594.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=AC00_RS05580;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_000014594.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 11445 11516 . + . ID=gene-AC00_RS31340;Name=AC00_RS31340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31340 NZ_JJLU01000117.1 Protein Homology CDS 11445 11516 . + 0 ID=cds-WP_212734940.1;Parent=gene-AC00_RS31340;Dbxref=GenBank:WP_212734940.1;Name=WP_212734940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051206.1;locus_tag=AC00_RS31340;product=hypothetical protein;protein_id=WP_212734940.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 11493 11630 . - . ID=gene-AC00_RS0125665;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=AC00_RS0125665 NZ_JJLU01000117.1 Protein Homology CDS 11493 11630 . - 0 ID=cds-WP_032213338.1;Parent=gene-AC00_RS0125665;Dbxref=GenBank:WP_032213338.1;Name=WP_032213338.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540334.1;locus_tag=AC00_RS0125665;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_032213338.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 11873 13942 . - . ID=gene-AC00_RS05575;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AC00_RS05575;old_locus_tag=AC00_4080 NZ_JJLU01000117.1 Protein Homology CDS 11873 13942 . - 0 ID=cds-WP_001291788.1;Parent=gene-AC00_RS05575;Dbxref=GenBank:WP_001291788.1;Name=WP_001291788.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=AC00_RS05575;product=glycine--tRNA ligase subunit beta;protein_id=WP_001291788.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 13952 14863 . - . ID=gene-AC00_RS05570;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AC00_RS05570;old_locus_tag=AC00_4081 NZ_JJLU01000117.1 Protein Homology CDS 13952 14863 . - 0 ID=cds-WP_001168544.1;Parent=gene-AC00_RS05570;Dbxref=GenBank:WP_001168544.1;Name=WP_001168544.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312470.1;locus_tag=AC00_RS05570;product=glycine--tRNA ligase subunit alpha;protein_id=WP_001168544.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 14958 15257 . - . ID=gene-AC00_RS05565;Name=ysaB;gbkey=Gene;gene=ysaB;gene_biotype=protein_coding;locus_tag=AC00_RS05565;old_locus_tag=AC00_4082 NZ_JJLU01000117.1 Protein Homology CDS 14958 15257 . - 0 ID=cds-WP_000980111.1;Parent=gene-AC00_RS05565;Dbxref=GenBank:WP_000980111.1;Name=WP_000980111.1;gbkey=CDS;gene=ysaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709347.1;locus_tag=AC00_RS05565;product=YsaB family lipoprotein;protein_id=WP_000980111.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 15432 16427 . + . ID=gene-AC00_RS05560;Name=wecH;gbkey=Gene;gene=wecH;gene_biotype=protein_coding;locus_tag=AC00_RS05560;old_locus_tag=AC00_4083 NZ_JJLU01000117.1 Protein Homology CDS 15432 16427 . + 0 ID=cds-WP_001182644.1;Parent=gene-AC00_RS05560;Dbxref=GenBank:WP_001182644.1;Name=WP_001182644.1;gbkey=CDS;gene=wecH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312471.1;locus_tag=AC00_RS05560;product=O-acetyltransferase WecH;protein_id=WP_001182644.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 16469 16906 . - . ID=gene-AC00_RS05555;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=AC00_RS05555;old_locus_tag=AC00_4084 NZ_JJLU01000117.1 Protein Homology CDS 16469 16906 . - 0 ID=cds-WP_001296808.1;Parent=gene-AC00_RS05555;Dbxref=GenBank:WP_001296808.1;Name=WP_001296808.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312472.2;locus_tag=AC00_RS05555;product=inner membrane protein YiaA;protein_id=WP_001296808.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 16952 17293 . - . ID=gene-AC00_RS05550;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=AC00_RS05550;old_locus_tag=AC00_4085 NZ_JJLU01000117.1 Protein Homology CDS 16952 17293 . - 0 ID=cds-WP_032281816.1;Parent=gene-AC00_RS05550;Dbxref=GenBank:WP_032281816.1;Name=WP_032281816.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709350.2;locus_tag=AC00_RS05550;product=inner membrane protein YiaB;protein_id=WP_032281816.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 17462 18916 . - . ID=gene-AC00_RS05545;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=AC00_RS05545;old_locus_tag=AC00_4086 NZ_JJLU01000117.1 Protein Homology CDS 17462 18916 . - 0 ID=cds-WP_032281817.1;Parent=gene-AC00_RS05545;Dbxref=GenBank:WP_032281817.1;Name=WP_032281817.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418021.1;locus_tag=AC00_RS05545;product=xylulokinase;protein_id=WP_032281817.1;transl_table=11 NZ_JJLU01000117.1 RefSeq gene 18988 20310 . - . ID=gene-AC00_RS05540;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=AC00_RS05540;old_locus_tag=AC00_4087 NZ_JJLU01000117.1 Protein Homology CDS 18988 20310 . - 0 ID=cds-WP_001149592.1;Parent=gene-AC00_RS05540;Dbxref=GenBank:WP_001149592.1;Name=WP_001149592.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312475.1;locus_tag=AC00_RS05540;product=xylose isomerase;protein_id=WP_001149592.1;transl_table=11 NZ_JJLU01000117.1 RefSeq pseudogene 20571 20886 . - . ID=gene-AC00_RS05535;Name=AC00_RS05535;end_range=20886,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS05535;old_locus_tag=AC00_4088;partial=true;pseudo=true NZ_JJLU01000117.1 Protein Homology CDS 20571 20886 . - 1 ID=cds-AC00_RS05535;Parent=gene-AC00_RS05535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=20886,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS05535;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000118.1 1 100759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000118.1 RefSeq region 1 100759 . + . ID=NZ_JJLU01000118.1:1..100759;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000118.1 RefSeq pseudogene 1 279 . - . ID=gene-AC00_RS05530;Name=AC00_RS05530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS05530;old_locus_tag=AC00_4089;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000118.1 Protein Homology CDS 1 279 . - 0 ID=cds-AC00_RS05530;Parent=gene-AC00_RS05530;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS05530;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 463 1455 . + . ID=gene-AC00_RS05525;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=AC00_RS05525;old_locus_tag=AC00_4090 NZ_JJLU01000118.1 Protein Homology CDS 463 1455 . + 0 ID=cds-WP_032281819.1;Parent=gene-AC00_RS05525;Dbxref=GenBank:WP_032281819.1;Name=WP_032281819.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312476.1;locus_tag=AC00_RS05525;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_032281819.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 1533 3074 . + . ID=gene-AC00_RS05520;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=AC00_RS05520;old_locus_tag=AC00_4091 NZ_JJLU01000118.1 Protein Homology CDS 1533 3074 . + 0 ID=cds-WP_001146509.1;Parent=gene-AC00_RS05520;Dbxref=GenBank:WP_001146509.1;Name=WP_001146509.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312477.1;locus_tag=AC00_RS05520;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_001146509.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 3052 4233 . + . ID=gene-AC00_RS05515;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=AC00_RS05515;old_locus_tag=AC00_4092 NZ_JJLU01000118.1 Protein Homology CDS 3052 4233 . + 0 ID=cds-WP_032281820.1;Parent=gene-AC00_RS05515;Dbxref=GenBank:WP_032281820.1;Name=WP_032281820.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=AC00_RS05515;product=xylose ABC transporter permease XylH;protein_id=WP_032281820.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 4311 5489 . + . ID=gene-AC00_RS05510;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=AC00_RS05510;old_locus_tag=AC00_4093 NZ_JJLU01000118.1 Protein Homology CDS 4311 5489 . + 0 ID=cds-WP_032182703.1;Parent=gene-AC00_RS05510;Dbxref=GenBank:WP_032182703.1;Name=WP_032182703.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312479.1;locus_tag=AC00_RS05510;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_032182703.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 5597 6421 . - . ID=gene-AC00_RS0125670;Name=bax;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=AC00_RS0125670;old_locus_tag=AC00_4094 NZ_JJLU01000118.1 Protein Homology CDS 5597 6421 . - 0 ID=cds-WP_001297957.1;Parent=gene-AC00_RS0125670;Dbxref=GenBank:WP_001297957.1;Name=WP_001297957.1;gbkey=CDS;gene=bax;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=AC00_RS0125670;product=protein bax;protein_id=WP_001297957.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 6741 8771 . + . ID=gene-AC00_RS05505;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=AC00_RS05505;old_locus_tag=AC00_4095 NZ_JJLU01000118.1 Protein Homology CDS 6741 8771 . + 0 ID=cds-WP_032281821.1;Parent=gene-AC00_RS05505;Dbxref=GenBank:WP_032281821.1;Name=WP_032281821.1;Ontology_term=GO:0004556;gbkey=CDS;gene=malS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312481.1;locus_tag=AC00_RS05505;product=alpha-amylase;protein_id=WP_032281821.1;transl_table=11 NZ_JJLU01000118.1 RefSeq pseudogene 8949 10201 . + . ID=gene-AC00_RS05500;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=pseudogene;locus_tag=AC00_RS05500;old_locus_tag=AC00_4096;pseudo=true NZ_JJLU01000118.1 Protein Homology CDS 8949 10201 . + 0 ID=cds-AC00_RS05500;Parent=gene-AC00_RS05500;Note=frameshifted;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312482.1;locus_tag=AC00_RS05500;product=valine--pyruvate transaminase;pseudo=true;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 10352 10825 . - . ID=gene-AC00_RS05495;Name=ysaA;gbkey=Gene;gene=ysaA;gene_biotype=protein_coding;locus_tag=AC00_RS05495;old_locus_tag=AC00_4098 NZ_JJLU01000118.1 Protein Homology CDS 10352 10825 . - 0 ID=cds-WP_032083849.1;Parent=gene-AC00_RS05495;Dbxref=GenBank:WP_032083849.1;Name=WP_032083849.1;gbkey=CDS;gene=ysaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312483.1;locus_tag=AC00_RS05495;product=4Fe-4S binding protein;protein_id=WP_032083849.1;transl_table=11 NZ_JJLU01000118.1 RefSeq pseudogene 10927 11067 . - . ID=gene-AC00_RS29830;Name=AC00_RS29830;end_range=11067,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29830;old_locus_tag=AC00_4099;partial=true;pseudo=true NZ_JJLU01000118.1 Protein Homology CDS 10927 11067 . - 0 ID=cds-AC00_RS29830;Parent=gene-AC00_RS29830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11067,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418031.1;locus_tag=AC00_RS29830;partial=true;product=IclR family transcriptional regulator C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 11069 11884 . - . ID=gene-AC00_RS05490;Name=AC00_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05490;old_locus_tag=AC00_4100 NZ_JJLU01000118.1 Protein Homology CDS 11069 11884 . - 0 ID=cds-WP_000891834.1;Parent=gene-AC00_RS05490;Dbxref=GenBank:WP_000891834.1;Name=WP_000891834.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312484.1;locus_tag=AC00_RS05490;product=AraC family transcriptional regulator;protein_id=WP_000891834.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 12110 13510 . + . ID=gene-AC00_RS05485;Name=AC00_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05485;old_locus_tag=AC00_4101 NZ_JJLU01000118.1 Protein Homology CDS 12110 13510 . + 0 ID=cds-WP_032288349.1;Parent=gene-AC00_RS05485;Dbxref=GenBank:WP_032288349.1;Name=WP_032288349.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312485.1;locus_tag=AC00_RS05485;product=MFS transporter;protein_id=WP_032288349.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 13521 15491 . + . ID=gene-AC00_RS05480;Name=AC00_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05480;old_locus_tag=AC00_4102 NZ_JJLU01000118.1 Protein Homology CDS 13521 15491 . + 0 ID=cds-WP_001626245.1;Parent=gene-AC00_RS05480;Dbxref=GenBank:WP_001626245.1;Name=WP_001626245.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312486.1;locus_tag=AC00_RS05480;product=glycoside hydrolase family 127 protein;protein_id=WP_001626245.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 15621 16361 . - . ID=gene-AC00_RS05475;Name=yiaT;gbkey=Gene;gene=yiaT;gene_biotype=protein_coding;locus_tag=AC00_RS05475;old_locus_tag=AC00_4103 NZ_JJLU01000118.1 Protein Homology CDS 15621 16361 . - 0 ID=cds-WP_001388654.1;Parent=gene-AC00_RS05475;Dbxref=GenBank:WP_001388654.1;Name=WP_001388654.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;gene=yiaT;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312487.1;locus_tag=AC00_RS05475;product=MipA/OmpV family protein;protein_id=WP_001388654.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 16485 17459 . + . ID=gene-AC00_RS05470;Name=yiaU;gbkey=Gene;gene=yiaU;gene_biotype=protein_coding;locus_tag=AC00_RS05470;old_locus_tag=AC00_4104 NZ_JJLU01000118.1 Protein Homology CDS 16485 17459 . + 0 ID=cds-WP_032281825.1;Parent=gene-AC00_RS05470;Dbxref=GenBank:WP_032281825.1;Name=WP_032281825.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=yiaU;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312488.1;locus_tag=AC00_RS05470;product=LysR family transcriptional regulator;protein_id=WP_032281825.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 17456 18592 . - . ID=gene-AC00_RS05465;Name=yiaV;gbkey=Gene;gene=yiaV;gene_biotype=protein_coding;locus_tag=AC00_RS05465;old_locus_tag=AC00_4105 NZ_JJLU01000118.1 Protein Homology CDS 17456 18592 . - 0 ID=cds-WP_032281826.1;Parent=gene-AC00_RS05465;Dbxref=GenBank:WP_032281826.1;Name=WP_032281826.1;gbkey=CDS;gene=yiaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312489.1;locus_tag=AC00_RS05465;product=HlyD family secretion protein;protein_id=WP_032281826.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 18598 18921 . - . ID=gene-AC00_RS05460;Name=yiaW;gbkey=Gene;gene=yiaW;gene_biotype=protein_coding;locus_tag=AC00_RS05460;old_locus_tag=AC00_4106 NZ_JJLU01000118.1 Protein Homology CDS 18598 18921 . - 0 ID=cds-WP_000478193.1;Parent=gene-AC00_RS05460;Dbxref=GenBank:WP_000478193.1;Name=WP_000478193.1;gbkey=CDS;gene=yiaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312490.1;locus_tag=AC00_RS05460;product=DUF3302 domain-containing protein;protein_id=WP_000478193.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 19044 19247 . + . ID=gene-AC00_RS30555;Name=AC00_RS30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30555;old_locus_tag=AC00_4107 NZ_JJLU01000118.1 GeneMarkS-2+ CDS 19044 19247 . + 0 ID=cds-WP_122998997.1;Parent=gene-AC00_RS30555;Dbxref=GenBank:WP_122998997.1;Name=WP_122998997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS30555;product=hypothetical protein;protein_id=WP_122998997.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 19466 21004 . - . ID=gene-AC00_RS05450;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=AC00_RS05450;old_locus_tag=AC00_4108 NZ_JJLU01000118.1 Protein Homology CDS 19466 21004 . - 0 ID=cds-WP_001359414.1;Parent=gene-AC00_RS05450;Dbxref=GenBank:WP_001359414.1;Name=WP_001359414.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551836.1;locus_tag=AC00_RS05450;product=aldehyde dehydrogenase AldB;protein_id=WP_001359414.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 21169 22320 . - . ID=gene-AC00_RS05445;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=AC00_RS05445;old_locus_tag=AC00_4109 NZ_JJLU01000118.1 Protein Homology CDS 21169 22320 . - 0 ID=cds-WP_032281829.1;Parent=gene-AC00_RS05445;Dbxref=GenBank:WP_032281829.1;Name=WP_032281829.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026233.1;locus_tag=AC00_RS05445;product=L-threonine dehydrogenase;protein_id=WP_032281829.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 22510 24354 . - . ID=gene-AC00_RS05440;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=AC00_RS05440;old_locus_tag=AC00_4110 NZ_JJLU01000118.1 Protein Homology CDS 22510 24354 . - 0 ID=cds-WP_032281830.1;Parent=gene-AC00_RS05440;Dbxref=GenBank:WP_032281830.1;Name=WP_032281830.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418047.1;locus_tag=AC00_RS05440;product=selenocysteine-specific translation elongation factor;protein_id=WP_032281830.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 24351 25742 . - . ID=gene-AC00_RS05435;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=AC00_RS05435;old_locus_tag=AC00_4111 NZ_JJLU01000118.1 Protein Homology CDS 24351 25742 . - 0 ID=cds-WP_032281831.1;Parent=gene-AC00_RS05435;Dbxref=GenBank:WP_032281831.1;Name=WP_032281831.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=AC00_RS05435;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_032281831.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 25840 26448 . - . ID=gene-AC00_RS05430;Name=yibF;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=AC00_RS05430;old_locus_tag=AC00_4112 NZ_JJLU01000118.1 Protein Homology CDS 25840 26448 . - 0 ID=cds-WP_000779792.1;Parent=gene-AC00_RS05430;Dbxref=GenBank:WP_000779792.1;Name=WP_000779792.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yibF;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418049.1;locus_tag=AC00_RS05430;product=glutathione S-transferase;protein_id=WP_000779792.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 26519 27655 . - . ID=gene-AC00_RS05425;Name=yibH;gbkey=Gene;gene=yibH;gene_biotype=protein_coding;locus_tag=AC00_RS05425;old_locus_tag=AC00_4113 NZ_JJLU01000118.1 Protein Homology CDS 26519 27655 . - 0 ID=cds-WP_000364939.1;Parent=gene-AC00_RS05425;Dbxref=GenBank:WP_000364939.1;Name=WP_000364939.1;gbkey=CDS;gene=yibH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312500.1;locus_tag=AC00_RS05425;product=HlyD family secretion protein;protein_id=WP_000364939.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 27658 28020 . - . ID=gene-AC00_RS05420;Name=yibI;gbkey=Gene;gene=yibI;gene_biotype=protein_coding;locus_tag=AC00_RS05420;old_locus_tag=AC00_4114 NZ_JJLU01000118.1 Protein Homology CDS 27658 28020 . - 0 ID=cds-WP_000479624.1;Parent=gene-AC00_RS05420;Dbxref=GenBank:WP_000479624.1;Name=WP_000479624.1;gbkey=CDS;gene=yibI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418055.1;locus_tag=AC00_RS05420;product=DUF3302 domain-containing protein;protein_id=WP_000479624.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 28557 30470 . + . ID=gene-AC00_RS05415;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=AC00_RS05415;old_locus_tag=AC00_4115 NZ_JJLU01000118.1 Protein Homology CDS 28557 30470 . + 0 ID=cds-WP_000093251.1;Parent=gene-AC00_RS05415;Dbxref=GenBank:WP_000093251.1;Name=WP_000093251.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312502.1;locus_tag=AC00_RS05415;product=PTS mannitol transporter subunit IICBA;protein_id=WP_000093251.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 30700 31848 . + . ID=gene-AC00_RS05410;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=AC00_RS05410;old_locus_tag=AC00_4116 NZ_JJLU01000118.1 Protein Homology CDS 30700 31848 . + 0 ID=cds-WP_032281832.1;Parent=gene-AC00_RS05410;Dbxref=GenBank:WP_032281832.1;Name=WP_032281832.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418057.1;locus_tag=AC00_RS05410;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_032281832.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 31848 32435 . + . ID=gene-AC00_RS05405;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=AC00_RS05405;old_locus_tag=AC00_4117 NZ_JJLU01000118.1 Protein Homology CDS 31848 32435 . + 0 ID=cds-WP_032281833.1;Parent=gene-AC00_RS05405;Dbxref=GenBank:WP_032281833.1;Name=WP_032281833.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418058.1;locus_tag=AC00_RS05405;product=mannitol operon repressor MtlR;protein_id=WP_032281833.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 32447 32656 . - . ID=gene-AC00_RS05400;Name=yibT;gbkey=Gene;gene=yibT;gene_biotype=protein_coding;locus_tag=AC00_RS05400;old_locus_tag=AC00_4118 NZ_JJLU01000118.1 Protein Homology CDS 32447 32656 . - 0 ID=cds-WP_000517100.1;Parent=gene-AC00_RS05400;Dbxref=GenBank:WP_000517100.1;Name=WP_000517100.1;gbkey=CDS;gene=yibT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588470.1;locus_tag=AC00_RS05400;product=protein YibT;protein_id=WP_000517100.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 32941 33303 . + . ID=gene-AC00_RS05395;Name=yibL;gbkey=Gene;gene=yibL;gene_biotype=protein_coding;locus_tag=AC00_RS05395;old_locus_tag=AC00_4119 NZ_JJLU01000118.1 Protein Homology CDS 32941 33303 . + 0 ID=cds-WP_000665676.1;Parent=gene-AC00_RS05395;Dbxref=GenBank:WP_000665676.1;Name=WP_000665676.1;gbkey=CDS;gene=yibL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=AC00_RS05395;product=YibL family ribosome-associated protein;protein_id=WP_000665676.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 33849 34532 . + . ID=gene-AC00_RS05390;Name=AC00_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05390;old_locus_tag=AC00_4120 NZ_JJLU01000118.1 Protein Homology CDS 33849 34532 . + 0 ID=cds-WP_032281835.1;Parent=gene-AC00_RS05390;Dbxref=GenBank:WP_032281835.1;Name=WP_032281835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049680.1;locus_tag=AC00_RS05390;product=DUF3251 domain-containing protein;protein_id=WP_032281835.1;transl_table=11 NZ_JJLU01000118.1 RefSeq pseudogene 34576 35043 . + . ID=gene-AC00_RS31750;Name=AC00_RS31750;end_range=35043,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31750;partial=true;pseudo=true NZ_JJLU01000118.1 Protein Homology CDS 34576 35043 . + 0 ID=cds-AC00_RS31750;Parent=gene-AC00_RS31750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=35043,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.6;locus_tag=AC00_RS31750;partial=true;product=ESPR-type extended signal peptide-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 35149 40341 . + . ID=gene-AC00_RS05385;Name=AC00_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05385;old_locus_tag=AC00_4121 NZ_JJLU01000118.1 Protein Homology CDS 35149 40341 . + 0 ID=cds-WP_432757353.1;Parent=gene-AC00_RS05385;Dbxref=GenBank:WP_432757353.1;Name=WP_432757353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001521601.1;locus_tag=AC00_RS05385;product=YadA-like family protein;protein_id=WP_432757353.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 40768 42423 . + . ID=gene-AC00_RS05380;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=AC00_RS05380;old_locus_tag=AC00_4122 NZ_JJLU01000118.1 Protein Homology CDS 40768 42423 . + 0 ID=cds-WP_001055289.1;Parent=gene-AC00_RS05380;Dbxref=GenBank:WP_001055289.1;Name=WP_001055289.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312508.1;locus_tag=AC00_RS05380;product=L-lactate permease;protein_id=WP_001055289.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 42423 43199 . + . ID=gene-AC00_RS05375;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=AC00_RS05375;old_locus_tag=AC00_4123 NZ_JJLU01000118.1 Protein Homology CDS 42423 43199 . + 0 ID=cds-WP_000636500.1;Parent=gene-AC00_RS05375;Dbxref=GenBank:WP_000636500.1;Name=WP_000636500.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418061.1;locus_tag=AC00_RS05375;product=transcriptional regulator LldR;protein_id=WP_000636500.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 43196 44386 . + . ID=gene-AC00_RS05370;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AC00_RS05370;old_locus_tag=AC00_4124 NZ_JJLU01000118.1 Protein Homology CDS 43196 44386 . + 0 ID=cds-WP_000586976.1;Parent=gene-AC00_RS05370;Dbxref=GenBank:WP_000586976.1;Name=WP_000586976.1;gbkey=CDS;gene=lldD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418062.1;locus_tag=AC00_RS05370;product=quinone-dependent L-lactate dehydrogenase;protein_id=WP_000586976.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 44583 45056 . + . ID=gene-AC00_RS05365;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=AC00_RS05365;old_locus_tag=AC00_4125 NZ_JJLU01000118.1 Protein Homology CDS 44583 45056 . + 0 ID=cds-WP_000932347.1;Parent=gene-AC00_RS05365;Dbxref=GenBank:WP_000932347.1;Name=WP_000932347.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418063.1;locus_tag=AC00_RS05365;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_000932347.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 45118 45939 . - . ID=gene-AC00_RS05360;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=AC00_RS05360;old_locus_tag=AC00_4126 NZ_JJLU01000118.1 Protein Homology CDS 45118 45939 . - 0 ID=cds-WP_032281836.1;Parent=gene-AC00_RS05360;Dbxref=GenBank:WP_032281836.1;Name=WP_032281836.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=AC00_RS05360;product=serine O-acetyltransferase;protein_id=WP_032281836.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 46019 47038 . - . ID=gene-AC00_RS05355;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=AC00_RS05355;old_locus_tag=AC00_4127 NZ_JJLU01000118.1 Protein Homology CDS 46019 47038 . - 0 ID=cds-WP_032281837.1;Parent=gene-AC00_RS05355;Dbxref=GenBank:WP_032281837.1;Name=WP_032281837.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=AC00_RS05355;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_032281837.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 47038 47505 . - . ID=gene-AC00_RS05350;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AC00_RS05350;old_locus_tag=AC00_4128 NZ_JJLU01000118.1 Protein Homology CDS 47038 47505 . - 0 ID=cds-WP_000003382.1;Parent=gene-AC00_RS05350;Dbxref=GenBank:WP_000003382.1;Name=WP_000003382.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=AC00_RS05350;product=protein-export chaperone SecB;protein_id=WP_000003382.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 47568 47819 . - . ID=gene-AC00_RS05345;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=AC00_RS05345;old_locus_tag=AC00_4129 NZ_JJLU01000118.1 Protein Homology CDS 47568 47819 . - 0 ID=cds-WP_000024392.1;Parent=gene-AC00_RS05345;Dbxref=GenBank:WP_000024392.1;Name=WP_000024392.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312515.1;locus_tag=AC00_RS05345;product=glutaredoxin 3;protein_id=WP_000024392.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 47961 48392 . - . ID=gene-AC00_RS05340;Name=yibN;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=AC00_RS05340;old_locus_tag=AC00_4130 NZ_JJLU01000118.1 Protein Homology CDS 47961 48392 . - 0 ID=cds-WP_001368341.1;Parent=gene-AC00_RS05340;Dbxref=GenBank:WP_001368341.1;Name=WP_001368341.1;gbkey=CDS;gene=yibN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312516.1;locus_tag=AC00_RS05340;product=rhodanese-like domain-containing protein;protein_id=WP_001368341.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 48637 50181 . + . ID=gene-AC00_RS05335;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=AC00_RS05335;old_locus_tag=AC00_4131 NZ_JJLU01000118.1 Protein Homology CDS 48637 50181 . + 0 ID=cds-WP_032281838.1;Parent=gene-AC00_RS05335;Dbxref=GenBank:WP_032281838.1;Name=WP_032281838.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=AC00_RS05335;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_032281838.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 50215 51474 . + . ID=gene-AC00_RS05330;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=AC00_RS05330;old_locus_tag=AC00_4132 NZ_JJLU01000118.1 Protein Homology CDS 50215 51474 . + 0 ID=cds-WP_230003888.1;Parent=gene-AC00_RS05330;Dbxref=GenBank:WP_230003888.1;Name=WP_230003888.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418070.6;locus_tag=AC00_RS05330;product=murein hydrolase activator EnvC;protein_id=WP_230003888.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 51478 52437 . + . ID=gene-AC00_RS05325;Name=yibQ;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=AC00_RS05325;old_locus_tag=AC00_4133 NZ_JJLU01000118.1 Protein Homology CDS 51478 52437 . + 0 ID=cds-WP_032281840.1;Parent=gene-AC00_RS05325;Dbxref=GenBank:WP_032281840.1;Name=WP_032281840.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;gene=yibQ;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312519.2;locus_tag=AC00_RS05325;product=divergent polysaccharide deacetylase family protein;protein_id=WP_032281840.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 52424 53458 . - . ID=gene-AC00_RS05320;Name=waaH;gbkey=Gene;gene=waaH;gene_biotype=protein_coding;locus_tag=AC00_RS05320;old_locus_tag=AC00_4134 NZ_JJLU01000118.1 Protein Homology CDS 52424 53458 . - 0 ID=cds-WP_000982091.1;Parent=gene-AC00_RS05320;Dbxref=GenBank:WP_000982091.1;Name=WP_000982091.1;gbkey=CDS;gene=waaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418072.1;locus_tag=AC00_RS05320;product=UDP-glucuronate:LPS(HepIII) glycosyltransferase;protein_id=WP_000982091.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 53697 54722 . - . ID=gene-AC00_RS05315;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=AC00_RS05315;old_locus_tag=AC00_4135 NZ_JJLU01000118.1 Protein Homology CDS 53697 54722 . - 0 ID=cds-WP_000646014.1;Parent=gene-AC00_RS05315;Dbxref=GenBank:WP_000646014.1;Name=WP_000646014.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=AC00_RS05315;product=L-threonine 3-dehydrogenase;protein_id=WP_000646014.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 54732 55928 . - . ID=gene-AC00_RS05310;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=AC00_RS05310;old_locus_tag=AC00_4136 NZ_JJLU01000118.1 Protein Homology CDS 54732 55928 . - 0 ID=cds-WP_001213834.1;Parent=gene-AC00_RS05310;Dbxref=GenBank:WP_001213834.1;Name=WP_001213834.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=AC00_RS05310;product=glycine C-acetyltransferase;protein_id=WP_001213834.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 56203 57060 . - . ID=gene-AC00_RS05305;Name=yibB;gbkey=Gene;gene=yibB;gene_biotype=protein_coding;locus_tag=AC00_RS05305;old_locus_tag=AC00_4137 NZ_JJLU01000118.1 Protein Homology CDS 56203 57060 . - 0 ID=cds-WP_000842831.1;Parent=gene-AC00_RS05305;Dbxref=GenBank:WP_000842831.1;Name=WP_000842831.1;gbkey=CDS;gene=yibB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709398.1;locus_tag=AC00_RS05305;product=protein YibB;protein_id=WP_000842831.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 57364 58296 . + . ID=gene-AC00_RS05300;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AC00_RS05300;old_locus_tag=AC00_4138 NZ_JJLU01000118.1 Protein Homology CDS 57364 58296 . + 0 ID=cds-WP_023308465.1;Parent=gene-AC00_RS05300;Dbxref=GenBank:WP_023308465.1;Name=WP_023308465.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=AC00_RS05300;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_023308465.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 58306 59352 . + . ID=gene-AC00_RS05295;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=AC00_RS05295;old_locus_tag=AC00_4139 NZ_JJLU01000118.1 Protein Homology CDS 58306 59352 . + 0 ID=cds-WP_032281842.1;Parent=gene-AC00_RS05295;Dbxref=GenBank:WP_032281842.1;Name=WP_032281842.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418077.1;locus_tag=AC00_RS05295;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_032281842.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 59356 60330 . + . ID=gene-AC00_RS05290;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=AC00_RS05290;old_locus_tag=AC00_4140 NZ_JJLU01000118.1 Protein Homology CDS 59356 60330 . + 0 ID=cds-WP_032281843.1;Parent=gene-AC00_RS05290;Dbxref=GenBank:WP_032281843.1;Name=WP_032281843.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312526.1;locus_tag=AC00_RS05290;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_032281843.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 60344 61552 . + . ID=gene-AC00_RS05285;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=AC00_RS05285;old_locus_tag=AC00_4141 NZ_JJLU01000118.1 Protein Homology CDS 60344 61552 . + 0 ID=cds-WP_032281844.1;Parent=gene-AC00_RS05285;Dbxref=GenBank:WP_032281844.1;Name=WP_032281844.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709402.1;locus_tag=AC00_RS05285;product=O-antigen ligase RfaL;protein_id=WP_032281844.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 61588 62730 . - . ID=gene-AC00_RS05280;Name=AC00_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05280;old_locus_tag=AC00_4142 NZ_JJLU01000118.1 Protein Homology CDS 61588 62730 . - 0 ID=cds-WP_032281845.1;Parent=gene-AC00_RS05280;Dbxref=GenBank:WP_032281845.1;Name=WP_032281845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312528.1;locus_tag=AC00_RS05280;product=lipopolysaccharide N-acetylglucosaminyltransferase;protein_id=WP_032281845.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 62739 63752 . - . ID=gene-AC00_RS05275;Name=AC00_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05275;old_locus_tag=AC00_4143 NZ_JJLU01000118.1 Protein Homology CDS 62739 63752 . - 0 ID=cds-WP_032281846.1;Parent=gene-AC00_RS05275;Dbxref=GenBank:WP_032281846.1;Name=WP_032281846.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312529.1;locus_tag=AC00_RS05275;product=glycosyltransferase family 8 protein;protein_id=WP_032281846.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 63777 64484 . - . ID=gene-AC00_RS05270;Name=rfaY;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=AC00_RS05270;old_locus_tag=AC00_4144 NZ_JJLU01000118.1 Protein Homology CDS 63777 64484 . - 0 ID=cds-WP_000639942.1;Parent=gene-AC00_RS05270;Dbxref=GenBank:WP_000639942.1;Name=WP_000639942.1;gbkey=CDS;gene=rfaY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709405.1;locus_tag=AC00_RS05270;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_000639942.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 64510 65517 . - . ID=gene-AC00_RS05265;Name=waaO;gbkey=Gene;gene=waaO;gene_biotype=protein_coding;gene_synonym=rfaI;locus_tag=AC00_RS05265;old_locus_tag=AC00_4145 NZ_JJLU01000118.1 Protein Homology CDS 64510 65517 . - 0 ID=cds-WP_000080649.1;Parent=gene-AC00_RS05265;Dbxref=GenBank:WP_000080649.1;Name=WP_000080649.1;Ontology_term=GO:0009103,GO:0008918;gbkey=CDS;gene=waaO;go_function=lipopolysaccharide 3-alpha-galactosyltransferase activity|0008918||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457454.1;locus_tag=AC00_RS05265;product=lipopolysaccharide 3-alpha-galactosyltransferase;protein_id=WP_000080649.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 65560 66357 . - . ID=gene-AC00_RS05260;Name=rfaP;gbkey=Gene;gene=rfaP;gene_biotype=protein_coding;locus_tag=AC00_RS05260;old_locus_tag=AC00_4146 NZ_JJLU01000118.1 Protein Homology CDS 65560 66357 . - 0 ID=cds-WP_001295235.1;Parent=gene-AC00_RS05260;Dbxref=GenBank:WP_001295235.1;Name=WP_001295235.1;Ontology_term=GO:0009103,GO:0016301;gbkey=CDS;gene=rfaP;go_function=kinase activity|0016301||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312532.2;locus_tag=AC00_RS05260;product=lipopolysaccharide core heptose(I) kinase RfaP;protein_id=WP_001295235.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 66350 67474 . - . ID=gene-AC00_RS05255;Name=waaG;gbkey=Gene;gene=waaG;gene_biotype=protein_coding;locus_tag=AC00_RS05255;old_locus_tag=AC00_4147 NZ_JJLU01000118.1 Protein Homology CDS 66350 67474 . - 0 ID=cds-WP_000634249.1;Parent=gene-AC00_RS05255;Dbxref=GenBank:WP_000634249.1;Name=WP_000634249.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;gene=waaG;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312533.1;locus_tag=AC00_RS05255;product=glycosyltransferase family 4 protein;protein_id=WP_000634249.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 67471 68529 . - . ID=gene-AC00_RS05250;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=AC00_RS05250;old_locus_tag=AC00_4148 NZ_JJLU01000118.1 Protein Homology CDS 67471 68529 . - 0 ID=cds-WP_071999277.1;Parent=gene-AC00_RS05250;Dbxref=GenBank:WP_071999277.1;Name=WP_071999277.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709409.1;locus_tag=AC00_RS05250;product=lipopolysaccharide core heptosyltransferase RfaQ;protein_id=WP_071999277.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 68942 70219 . + . ID=gene-AC00_RS05245;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AC00_RS05245;old_locus_tag=AC00_4149 NZ_JJLU01000118.1 Protein Homology CDS 68942 70219 . + 0 ID=cds-WP_032281849.1;Parent=gene-AC00_RS05245;Dbxref=GenBank:WP_032281849.1;Name=WP_032281849.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312535.1;locus_tag=AC00_RS05245;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_032281849.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 70227 70706 . + . ID=gene-AC00_RS05240;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AC00_RS05240;old_locus_tag=AC00_4150 NZ_JJLU01000118.1 Protein Homology CDS 70227 70706 . + 0 ID=cds-WP_001171873.1;Parent=gene-AC00_RS05240;Dbxref=GenBank:WP_001171873.1;Name=WP_001171873.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312536.1;locus_tag=AC00_RS05240;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001171873.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 70745 71554 . - . ID=gene-AC00_RS05235;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AC00_RS05235;old_locus_tag=AC00_4151 NZ_JJLU01000118.1 Protein Homology CDS 70745 71554 . - 0 ID=cds-WP_032288351.1;Parent=gene-AC00_RS05235;Dbxref=GenBank:WP_032288351.1;Name=WP_032288351.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=AC00_RS05235;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_032288351.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 71652 71819 . - . ID=gene-AC00_RS05230;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AC00_RS05230;old_locus_tag=AC00_4152 NZ_JJLU01000118.1 Protein Homology CDS 71652 71819 . - 0 ID=cds-WP_001051798.1;Parent=gene-AC00_RS05230;Dbxref=GenBank:WP_001051798.1;Name=WP_001051798.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=AC00_RS05230;product=50S ribosomal protein L33;protein_id=WP_001051798.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 71840 72076 . - . ID=gene-AC00_RS05225;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AC00_RS05225;old_locus_tag=AC00_4153 NZ_JJLU01000118.1 Protein Homology CDS 71840 72076 . - 0 ID=cds-WP_000091955.1;Parent=gene-AC00_RS05225;Dbxref=GenBank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=AC00_RS05225;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 72293 72961 . - . ID=gene-AC00_RS05220;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=AC00_RS05220;old_locus_tag=AC00_4154 NZ_JJLU01000118.1 Protein Homology CDS 72293 72961 . - 0 ID=cds-WP_001297375.1;Parent=gene-AC00_RS05220;Dbxref=GenBank:WP_001297375.1;Name=WP_001297375.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709417.4;locus_tag=AC00_RS05220;product=RadC family protein;protein_id=WP_001297375.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 73133 74353 . + . ID=gene-AC00_RS05215;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AC00_RS05215;old_locus_tag=AC00_4155 NZ_JJLU01000118.1 Protein Homology CDS 73133 74353 . + 0 ID=cds-WP_000050121.1;Parent=gene-AC00_RS05215;Dbxref=GenBank:WP_000050121.1;Name=WP_000050121.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=AC00_RS05215;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_000050121.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 74331 74789 . + . ID=gene-AC00_RS05210;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AC00_RS05210;old_locus_tag=AC00_4156 NZ_JJLU01000118.1 Protein Homology CDS 74331 74789 . + 0 ID=cds-WP_000976070.1;Parent=gene-AC00_RS05210;Dbxref=GenBank:WP_000976070.1;Name=WP_000976070.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=AC00_RS05210;product=dUTP diphosphatase;protein_id=WP_000976070.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 74896 75492 . + . ID=gene-AC00_RS05205;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=AC00_RS05205;old_locus_tag=AC00_4157 NZ_JJLU01000118.1 Protein Homology CDS 74896 75492 . + 0 ID=cds-WP_000818601.1;Parent=gene-AC00_RS05205;Dbxref=GenBank:WP_000818601.1;Name=WP_000818601.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=AC00_RS05205;product=nucleoid occlusion factor SlmA;protein_id=WP_000818601.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 75529 76170 . - . ID=gene-AC00_RS05200;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AC00_RS05200;old_locus_tag=AC00_4158 NZ_JJLU01000118.1 Protein Homology CDS 75529 76170 . - 0 ID=cds-WP_000806177.1;Parent=gene-AC00_RS05200;Dbxref=GenBank:WP_000806177.1;Name=WP_000806177.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418099.1;locus_tag=AC00_RS05200;product=orotate phosphoribosyltransferase;protein_id=WP_000806177.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 76236 76952 . - . ID=gene-AC00_RS05195;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AC00_RS05195;old_locus_tag=AC00_4159 NZ_JJLU01000118.1 Protein Homology CDS 76236 76952 . - 0 ID=cds-WP_001247089.1;Parent=gene-AC00_RS05195;Dbxref=GenBank:WP_001247089.1;Name=WP_001247089.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=AC00_RS05195;product=ribonuclease PH;protein_id=WP_001247089.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 77079 77942 . + . ID=gene-AC00_RS05190;Name=yicC;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=AC00_RS05190;old_locus_tag=AC00_4160 NZ_JJLU01000118.1 Protein Homology CDS 77079 77942 . + 0 ID=cds-WP_000621336.1;Parent=gene-AC00_RS05190;Dbxref=GenBank:WP_000621336.1;Name=WP_000621336.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yicC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=AC00_RS05190;product=YicC/YloC family endoribonuclease;protein_id=WP_000621336.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 78164 78988 . + . ID=gene-AC00_RS05185;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=AC00_RS05185;old_locus_tag=AC00_4162 NZ_JJLU01000118.1 Protein Homology CDS 78164 78988 . + 0 ID=cds-WP_001297973.1;Parent=gene-AC00_RS05185;Dbxref=GenBank:WP_001297973.1;Name=WP_001297973.1;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312547.2;locus_tag=AC00_RS05185;product=DNA damage-inducible protein D;protein_id=WP_001297973.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 79280 79897 . + . ID=gene-AC00_RS05180;Name=yicG;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=AC00_RS05180;old_locus_tag=AC00_4163 NZ_JJLU01000118.1 Protein Homology CDS 79280 79897 . + 0 ID=cds-WP_000924289.1;Parent=gene-AC00_RS05180;Dbxref=GenBank:WP_000924289.1;Name=WP_000924289.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312548.2;locus_tag=AC00_RS05180;product=trimeric intracellular cation channel family protein;protein_id=WP_000924289.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 79894 81576 . - . ID=gene-AC00_RS05175;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=AC00_RS05175;old_locus_tag=AC00_4164 NZ_JJLU01000118.1 Protein Homology CDS 79894 81576 . - 0 ID=cds-WP_032281851.1;Parent=gene-AC00_RS05175;Dbxref=GenBank:WP_032281851.1;Name=WP_032281851.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709426.2;locus_tag=AC00_RS05175;product=NAD-dependent DNA ligase LigB;protein_id=WP_032281851.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 81834 82457 . + . ID=gene-AC00_RS05170;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AC00_RS05170;old_locus_tag=AC00_4165 NZ_JJLU01000118.1 Protein Homology CDS 81834 82457 . + 0 ID=cds-WP_032281852.1;Parent=gene-AC00_RS05170;Dbxref=GenBank:WP_032281852.1;Name=WP_032281852.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=AC00_RS05170;product=guanylate kinase;protein_id=WP_032281852.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 82512 82787 . + . ID=gene-AC00_RS05165;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AC00_RS05165;old_locus_tag=AC00_4166 NZ_JJLU01000118.1 Protein Homology CDS 82512 82787 . + 0 ID=cds-WP_000135058.1;Parent=gene-AC00_RS05165;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=AC00_RS05165;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 82806 84914 . + . ID=gene-AC00_RS05160;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=AC00_RS05160;old_locus_tag=AC00_4167 NZ_JJLU01000118.1 Protein Homology CDS 82806 84914 . + 0 ID=cds-WP_000280473.1;Parent=gene-AC00_RS05160;Dbxref=GenBank:WP_000280473.1;Name=WP_000280473.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312552.1;locus_tag=AC00_RS05160;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_000280473.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 84921 85610 . + . ID=gene-AC00_RS05155;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=AC00_RS05155;old_locus_tag=AC00_4168 NZ_JJLU01000118.1 Protein Homology CDS 84921 85610 . + 0 ID=cds-WP_001070174.1;Parent=gene-AC00_RS05155;Dbxref=GenBank:WP_001070174.1;Name=WP_001070174.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=AC00_RS05155;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_001070174.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 85616 87697 . + . ID=gene-AC00_RS05150;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=AC00_RS05150;old_locus_tag=AC00_4169 NZ_JJLU01000118.1 Protein Homology CDS 85616 87697 . + 0 ID=cds-WP_032281853.1;Parent=gene-AC00_RS05150;Dbxref=GenBank:WP_032281853.1;Name=WP_032281853.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418109.1;locus_tag=AC00_RS05150;product=ATP-dependent DNA helicase RecG;protein_id=WP_032281853.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 87866 89071 . - . ID=gene-AC00_RS05145;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=AC00_RS05145;old_locus_tag=AC00_4170 NZ_JJLU01000118.1 Protein Homology CDS 87866 89071 . - 0 ID=cds-WP_000468833.1;Parent=gene-AC00_RS05145;Dbxref=GenBank:WP_000468833.1;Name=WP_000468833.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418110.1;locus_tag=AC00_RS05145;product=sodium/glutamate symporter;protein_id=WP_000468833.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 89351 90742 . + . ID=gene-AC00_RS05140;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=AC00_RS05140;old_locus_tag=AC00_4171 NZ_JJLU01000118.1 Protein Homology CDS 89351 90742 . + 0 ID=cds-WP_001295238.1;Parent=gene-AC00_RS05140;Dbxref=GenBank:WP_001295238.1;Name=WP_001295238.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312557.1;locus_tag=AC00_RS05140;product=xanthine/proton symporter XanP;protein_id=WP_001295238.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 90863 92572 . + . ID=gene-AC00_RS05135;Name=yicH;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=AC00_RS05135;old_locus_tag=AC00_4172 NZ_JJLU01000118.1 Protein Homology CDS 90863 92572 . + 0 ID=cds-WP_032281854.1;Parent=gene-AC00_RS05135;Dbxref=GenBank:WP_032281854.1;Name=WP_032281854.1;gbkey=CDS;gene=yicH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312558.1;locus_tag=AC00_RS05135;product=AsmA family protein;protein_id=WP_032281854.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 92625 94943 . - . ID=gene-AC00_RS05130;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=AC00_RS05130;old_locus_tag=AC00_4173 NZ_JJLU01000118.1 Protein Homology CDS 92625 94943 . - 0 ID=cds-WP_032281855.1;Parent=gene-AC00_RS05130;Dbxref=GenBank:WP_032281855.1;Name=WP_032281855.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418113.1;locus_tag=AC00_RS05130;product=alpha-xylosidase;protein_id=WP_032281855.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 94953 96335 . - . ID=gene-AC00_RS05125;Name=yicJ;gbkey=Gene;gene=yicJ;gene_biotype=protein_coding;locus_tag=AC00_RS05125;old_locus_tag=AC00_4174 NZ_JJLU01000118.1 Protein Homology CDS 94953 96335 . - 0 ID=cds-WP_032281856.1;Parent=gene-AC00_RS05125;Dbxref=GenBank:WP_032281856.1;Name=WP_032281856.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;gene=yicJ;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418114.4;locus_tag=AC00_RS05125;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_032281856.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 96628 96722 . + . ID=gene-AC00_RS05120;Name=AC00_RS05120;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS05120;old_locus_tag=AC00_4175 NZ_JJLU01000118.1 tRNAscan-SE tRNA 96628 96722 . + . ID=rna-AC00_RS05120;Parent=gene-AC00_RS05120;anticodon=(pos:96662..96664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS05120;product=tRNA-Sec NZ_JJLU01000118.1 tRNAscan-SE exon 96628 96722 . + . ID=exon-AC00_RS05120-1;Parent=rna-AC00_RS05120;anticodon=(pos:96662..96664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS05120;product=tRNA-Sec NZ_JJLU01000118.1 RefSeq pseudogene 96801 96962 . + . ID=gene-AC00_RS05115;Name=rhuM;end_range=96962,.;gbkey=Gene;gene=rhuM;gene_biotype=pseudogene;locus_tag=AC00_RS05115;old_locus_tag=AC00_4176;partial=true;pseudo=true;start_range=.,96801 NZ_JJLU01000118.1 Protein Homology CDS 96801 96962 . + 0 ID=cds-AC00_RS05115;Parent=gene-AC00_RS05115;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=96962,.;gbkey=CDS;gene=rhuM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280588.1;locus_tag=AC00_RS05115;partial=true;product=RhuM family protein;pseudo=true;start_range=.,96801;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 97359 98543 . + . ID=gene-AC00_RS05110;Name=setC;gbkey=Gene;gene=setC;gene_biotype=protein_coding;locus_tag=AC00_RS05110;old_locus_tag=AC00_4177 NZ_JJLU01000118.1 Protein Homology CDS 97359 98543 . + 0 ID=cds-WP_032281857.1;Parent=gene-AC00_RS05110;Dbxref=GenBank:WP_032281857.1;Name=WP_032281857.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;gene=setC;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418115.1;locus_tag=AC00_RS05110;product=sugar efflux transporter;protein_id=WP_032281857.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 98654 99577 . + . ID=gene-AC00_RS05105;Name=yicL;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=AC00_RS05105;old_locus_tag=AC00_4178 NZ_JJLU01000118.1 Protein Homology CDS 98654 99577 . + 0 ID=cds-WP_000535960.1;Parent=gene-AC00_RS05105;Dbxref=GenBank:WP_000535960.1;Name=WP_000535960.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yicL;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418116.1;locus_tag=AC00_RS05105;product=carboxylate/amino acid/amine transporter;protein_id=WP_000535960.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 99581 100399 . - . ID=gene-AC00_RS05100;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=AC00_RS05100;old_locus_tag=AC00_4179 NZ_JJLU01000118.1 Protein Homology CDS 99581 100399 . - 0 ID=cds-WP_032281859.1;Parent=gene-AC00_RS05100;Dbxref=GenBank:WP_032281859.1;Name=WP_032281859.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418117.1;locus_tag=AC00_RS05100;product=lipoprotein NlpA;protein_id=WP_032281859.1;transl_table=11 NZ_JJLU01000118.1 RefSeq gene 100501 100759 . + . ID=gene-AC00_RS28435;Name=AC00_RS28435;end_range=100759,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28435;old_locus_tag=AC00_4180;partial=true NZ_JJLU01000118.1 Protein Homology CDS 100501 100759 . + 0 ID=cds-WP_001483558.1-2;Parent=gene-AC00_RS28435;Dbxref=GenBank:WP_001483558.1;Name=WP_001483558.1;end_range=100759,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28435;partial=true;product=IS1-like element transposase;protein_id=WP_001483558.1;transl_table=11 ##sequence-region NZ_JJLU01000119.1 1 44103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000119.1 RefSeq region 1 44103 . + . ID=NZ_JJLU01000119.1:1..44103;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000119.1 RefSeq gene 1 251 . + . ID=gene-AC00_RS05095;Name=AC00_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05095;old_locus_tag=AC00_4181;partial=true;start_range=.,1 NZ_JJLU01000119.1 Protein Homology CDS 1 251 . + 2 ID=cds-WP_000675026.1-3;Parent=gene-AC00_RS05095;Dbxref=GenBank:WP_000675026.1;Name=WP_000675026.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS05095;partial=true;product=IS1 family transposase;protein_id=WP_000675026.1;start_range=.,1;transl_table=11 NZ_JJLU01000119.1 RefSeq pseudogene 258 1340 . + . ID=gene-AC00_RS05090;Name=AC00_RS05090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS05090;old_locus_tag=AC00_4182;partial=true;pseudo=true;start_range=.,258 NZ_JJLU01000119.1 Protein Homology CDS 258 1340 . + 0 ID=cds-AC00_RS05090;Parent=gene-AC00_RS05090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426517.1;locus_tag=AC00_RS05090;partial=true;product=carbohydrate porin;pseudo=true;start_range=.,258;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 1359 1811 . - . ID=gene-AC00_RS05085;Name=AC00_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05085;old_locus_tag=AC00_4183 NZ_JJLU01000119.1 Protein Homology CDS 1359 1811 . - 0 ID=cds-WP_032281862.1;Parent=gene-AC00_RS05085;Dbxref=GenBank:WP_032281862.1;Name=WP_032281862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418119.2;locus_tag=AC00_RS05085;product=DUF1198 family protein;protein_id=WP_032281862.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 1928 3319 . - . ID=gene-AC00_RS05080;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=AC00_RS05080;old_locus_tag=AC00_4184 NZ_JJLU01000119.1 Protein Homology CDS 1928 3319 . - 0 ID=cds-WP_000879194.1;Parent=gene-AC00_RS05080;Dbxref=GenBank:WP_000879194.1;Name=WP_000879194.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312630.1;locus_tag=AC00_RS05080;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_000879194.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 3457 4776 . - . ID=gene-AC00_RS05075;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=AC00_RS05075;old_locus_tag=AC00_4185 NZ_JJLU01000119.1 Protein Homology CDS 3457 4776 . - 0 ID=cds-WP_032281863.1;Parent=gene-AC00_RS05075;Dbxref=GenBank:WP_032281863.1;Name=WP_032281863.1;gbkey=CDS;gene=uhpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418123.2;locus_tag=AC00_RS05075;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_032281863.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 4786 6288 . - . ID=gene-AC00_RS05070;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=AC00_RS05070;old_locus_tag=AC00_4186 NZ_JJLU01000119.1 Protein Homology CDS 4786 6288 . - 0 ID=cds-WP_032281864.1;Parent=gene-AC00_RS05070;Dbxref=GenBank:WP_032281864.1;Name=WP_032281864.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418124.4;locus_tag=AC00_RS05070;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_032281864.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 6288 6878 . - . ID=gene-AC00_RS05065;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=AC00_RS05065;old_locus_tag=AC00_4187 NZ_JJLU01000119.1 Protein Homology CDS 6288 6878 . - 0 ID=cds-WP_000633668.1;Parent=gene-AC00_RS05065;Dbxref=GenBank:WP_000633668.1;Name=WP_000633668.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312633.1;locus_tag=AC00_RS05065;product=transcriptional regulator UhpA;protein_id=WP_000633668.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 7039 8364 . - . ID=gene-AC00_RS0125690;Name=AC00_RS0125690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125690;old_locus_tag=AC00_4188 NZ_JJLU01000119.1 Protein Homology CDS 7039 8364 . - 0 ID=cds-WP_247806842.1;Parent=gene-AC00_RS0125690;Dbxref=GenBank:WP_247806842.1;Name=WP_247806842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001626292.1;locus_tag=AC00_RS0125690;product=hypothetical protein;protein_id=WP_247806842.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 8779 9261 . - . ID=gene-AC00_RS30560;Name=AC00_RS30560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30560 NZ_JJLU01000119.1 Protein Homology CDS 8779 9261 . - 0 ID=cds-WP_122999020.1;Parent=gene-AC00_RS30560;Dbxref=GenBank:WP_122999020.1;Name=WP_122999020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312636.1;locus_tag=AC00_RS30560;product=hypothetical protein;protein_id=WP_122999020.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 10336 10626 . - . ID=gene-AC00_RS05055;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=AC00_RS05055;old_locus_tag=AC00_4191 NZ_JJLU01000119.1 Protein Homology CDS 10336 10626 . - 0 ID=cds-WP_001181706.1;Parent=gene-AC00_RS05055;Dbxref=GenBank:WP_001181706.1;Name=WP_001181706.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312638.1;locus_tag=AC00_RS05055;product=acetolactate synthase small subunit;protein_id=WP_001181706.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 10630 12318 . - . ID=gene-AC00_RS05050;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=AC00_RS05050;old_locus_tag=AC00_4192 NZ_JJLU01000119.1 Protein Homology CDS 10630 12318 . - 0 ID=cds-WP_021557340.1;Parent=gene-AC00_RS05050;Dbxref=GenBank:WP_021557340.1;Name=WP_021557340.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312639.1;locus_tag=AC00_RS05050;product=acetolactate synthase large subunit;protein_id=WP_021557340.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 12424 12522 . - . ID=gene-AC00_RS0125695;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=AC00_RS0125695 NZ_JJLU01000119.1 Protein Homology CDS 12424 12522 . - 0 ID=cds-WP_001312198.1;Parent=gene-AC00_RS0125695;Dbxref=GenBank:WP_001312198.1;Name=WP_001312198.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418128.1;locus_tag=AC00_RS0125695;product=ilvB operon leader peptide IvbL;protein_id=WP_001312198.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 13087 13176 . + . ID=gene-AC00_RS0125710;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=AC00_RS0125710 NZ_JJLU01000119.1 Protein Homology CDS 13087 13176 . + 0 ID=cds-WP_000060506.1;Parent=gene-AC00_RS0125710;Dbxref=GenBank:WP_000060506.1;Name=WP_000060506.1;gbkey=CDS;gene=tisB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502662.1;locus_tag=AC00_RS0125710;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_000060506.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 13352 13426 . - . ID=gene-AC00_RS31345;Name=ysdE;gbkey=Gene;gene=ysdE;gene_biotype=protein_coding;locus_tag=AC00_RS31345 NZ_JJLU01000119.1 Protein Homology CDS 13352 13426 . - 0 ID=cds-WP_211180519.1;Parent=gene-AC00_RS31345;Dbxref=GenBank:WP_211180519.1;Name=WP_211180519.1;gbkey=CDS;gene=ysdE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051212.1;locus_tag=AC00_RS31345;product=protein YsdE;protein_id=WP_211180519.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 13508 14692 . + . ID=gene-AC00_RS05045;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=AC00_RS05045;old_locus_tag=AC00_4194 NZ_JJLU01000119.1 Protein Homology CDS 13508 14692 . + 0 ID=cds-WP_032281867.1;Parent=gene-AC00_RS05045;Dbxref=GenBank:WP_032281867.1;Name=WP_032281867.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418129.2;locus_tag=AC00_RS05045;product=multidrug efflux MFS transporter EmrD;protein_id=WP_032281867.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 14700 15197 . - . ID=gene-AC00_RS05040;Name=yidF;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=AC00_RS05040;old_locus_tag=AC00_4195 NZ_JJLU01000119.1 Protein Homology CDS 14700 15197 . - 0 ID=cds-WP_032281868.1;Parent=gene-AC00_RS05040;Dbxref=GenBank:WP_032281868.1;Name=WP_032281868.1;gbkey=CDS;gene=yidF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312642.1;locus_tag=AC00_RS05040;product=radical SAM protein;protein_id=WP_032281868.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 15194 15556 . - . ID=gene-AC00_RS05035;Name=yidG;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=AC00_RS05035;old_locus_tag=AC00_4196 NZ_JJLU01000119.1 Protein Homology CDS 15194 15556 . - 0 ID=cds-WP_001113432.1;Parent=gene-AC00_RS05035;Dbxref=GenBank:WP_001113432.1;Name=WP_001113432.1;gbkey=CDS;gene=yidG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312643.1;locus_tag=AC00_RS05035;product=DUF202 domain-containing protein;protein_id=WP_001113432.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 15546 15893 . - . ID=gene-AC00_RS05030;Name=yidH;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=AC00_RS05030;old_locus_tag=AC00_4197 NZ_JJLU01000119.1 Protein Homology CDS 15546 15893 . - 0 ID=cds-WP_000703959.1;Parent=gene-AC00_RS05030;Dbxref=GenBank:WP_000703959.1;Name=WP_000703959.1;Ontology_term=GO:0005886;gbkey=CDS;gene=yidH;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312644.1;locus_tag=AC00_RS05030;product=YidH family protein;protein_id=WP_000703959.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 16002 16451 . + . ID=gene-AC00_RS05025;Name=yidI;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=AC00_RS05025;old_locus_tag=AC00_4198 NZ_JJLU01000119.1 Protein Homology CDS 16002 16451 . + 0 ID=cds-WP_000511299.1;Parent=gene-AC00_RS05025;Dbxref=GenBank:WP_000511299.1;Name=WP_000511299.1;gbkey=CDS;gene=yidI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312645.1;locus_tag=AC00_RS05025;product=protein YidI;protein_id=WP_000511299.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 16498 17991 . - . ID=gene-AC00_RS05020;Name=yidJ;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=AC00_RS05020;old_locus_tag=AC00_4199 NZ_JJLU01000119.1 Protein Homology CDS 16498 17991 . - 0 ID=cds-WP_032281869.1;Parent=gene-AC00_RS05020;Dbxref=GenBank:WP_032281869.1;Name=WP_032281869.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yidJ;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418134.1;locus_tag=AC00_RS05020;product=sulfatase-like hydrolase/transferase;protein_id=WP_032281869.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 17988 19703 . - . ID=gene-AC00_RS05015;Name=yidK;gbkey=Gene;gene=yidK;gene_biotype=protein_coding;locus_tag=AC00_RS05015;old_locus_tag=AC00_4200 NZ_JJLU01000119.1 Protein Homology CDS 17988 19703 . - 0 ID=cds-WP_001087117.1;Parent=gene-AC00_RS05015;Dbxref=GenBank:WP_001087117.1;Name=WP_001087117.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yidK;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312647.1;locus_tag=AC00_RS05015;product=solute:sodium symporter family transporter;protein_id=WP_001087117.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 19870 20763 . + . ID=gene-AC00_RS05010;Name=yidL;gbkey=Gene;gene=yidL;gene_biotype=protein_coding;locus_tag=AC00_RS05010;old_locus_tag=AC00_4201 NZ_JJLU01000119.1 Protein Homology CDS 19870 20763 . + 0 ID=cds-WP_032281870.1;Parent=gene-AC00_RS05010;Dbxref=GenBank:WP_032281870.1;Name=WP_032281870.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yidL;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418136.2;locus_tag=AC00_RS05010;product=helix-turn-helix transcriptional regulator;protein_id=WP_032281870.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 20760 22082 . - . ID=gene-AC00_RS05005;Name=AC00_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05005;old_locus_tag=AC00_4202 NZ_JJLU01000119.1 Protein Homology CDS 20760 22082 . - 0 ID=cds-WP_000160112.1;Parent=gene-AC00_RS05005;Dbxref=GenBank:WP_000160112.1;Name=WP_000160112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=AC00_RS05005;product=6-phospho-alpha-glucosidase;protein_id=WP_000160112.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 22082 23698 . - . ID=gene-AC00_RS05000;Name=AC00_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS05000;old_locus_tag=AC00_4203 NZ_JJLU01000119.1 Protein Homology CDS 22082 23698 . - 0 ID=cds-WP_032281872.1;Parent=gene-AC00_RS05000;Dbxref=GenBank:WP_032281872.1;Name=WP_032281872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312650.2;locus_tag=AC00_RS05000;product=PTS sugar transporter subunit IIB;protein_id=WP_032281872.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 23994 24710 . + . ID=gene-AC00_RS0125715;Name=yidP;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=AC00_RS0125715 NZ_JJLU01000119.1 Protein Homology CDS 23994 24710 . + 0 ID=cds-WP_032281873.1;Parent=gene-AC00_RS0125715;Dbxref=GenBank:WP_032281873.1;Name=WP_032281873.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yidP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312651.1;locus_tag=AC00_RS0125715;product=GntR family transcriptional regulator;protein_id=WP_032281873.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 24707 26368 . - . ID=gene-AC00_RS04995;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=AC00_RS04995;old_locus_tag=AC00_4206 NZ_JJLU01000119.1 Protein Homology CDS 24707 26368 . - 0 ID=cds-WP_001279763.1;Parent=gene-AC00_RS04995;Dbxref=GenBank:WP_001279763.1;Name=WP_001279763.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;gene=yidE;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312652.2;locus_tag=AC00_RS04995;product=putative transporter;protein_id=WP_001279763.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 26564 26992 . - . ID=gene-AC00_RS04990;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=AC00_RS04990;old_locus_tag=AC00_4207 NZ_JJLU01000119.1 Protein Homology CDS 26564 26992 . - 0 ID=cds-WP_001243431.1;Parent=gene-AC00_RS04990;Dbxref=GenBank:WP_001243431.1;Name=WP_001243431.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709512.2;locus_tag=AC00_RS04990;product=small heat shock chaperone IbpB;protein_id=WP_001243431.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 27104 27517 . - . ID=gene-AC00_RS04985;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=AC00_RS04985;old_locus_tag=AC00_4208 NZ_JJLU01000119.1 Protein Homology CDS 27104 27517 . - 0 ID=cds-WP_001243437.1;Parent=gene-AC00_RS04985;Dbxref=GenBank:WP_001243437.1;Name=WP_001243437.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=AC00_RS04985;product=small heat shock chaperone IbpA;protein_id=WP_001243437.1;transl_table=11 NZ_JJLU01000119.1 cmsearch sequence_feature 27511 27583 . - . ID=id-NZ_JJLU01000119.1:27511..27583;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLU01000119.1 RefSeq gene 27823 28155 . + . ID=gene-AC00_RS04980;Name=yidQ;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=AC00_RS04980;old_locus_tag=AC00_4209 NZ_JJLU01000119.1 Protein Homology CDS 27823 28155 . + 0 ID=cds-WP_000620888.1;Parent=gene-AC00_RS04980;Dbxref=GenBank:WP_000620888.1;Name=WP_000620888.1;gbkey=CDS;gene=yidQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418143.2;locus_tag=AC00_RS04980;product=YceK/YidQ family lipoprotein;protein_id=WP_000620888.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 28157 29371 . - . ID=gene-AC00_RS04975;Name=yidR;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=AC00_RS04975;old_locus_tag=AC00_4210 NZ_JJLU01000119.1 Protein Homology CDS 28157 29371 . - 0 ID=cds-WP_032281874.1;Parent=gene-AC00_RS04975;Dbxref=GenBank:WP_032281874.1;Name=WP_032281874.1;gbkey=CDS;gene=yidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312656.3;locus_tag=AC00_RS04975;product=DUF3748 domain-containing protein;protein_id=WP_032281874.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 29472 30572 . + . ID=gene-AC00_RS04970;Name=cbrA;gbkey=Gene;gene=cbrA;gene_biotype=protein_coding;locus_tag=AC00_RS04970;old_locus_tag=AC00_4211 NZ_JJLU01000119.1 Protein Homology CDS 29472 30572 . + 0 ID=cds-WP_032281881.1;Parent=gene-AC00_RS04970;Dbxref=GenBank:WP_032281881.1;Name=WP_032281881.1;gbkey=CDS;gene=cbrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709508.2;locus_tag=AC00_RS04970;product=colicin M resistance lipid reductase CbrA;protein_id=WP_032281881.1;transl_table=11 NZ_JJLU01000119.1 RefSeq pseudogene 30533 30646 . - . ID=gene-AC00_RS31350;Name=AC00_RS31350;end_range=30646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31350;partial=true;pseudo=true NZ_JJLU01000119.1 Protein Homology CDS 30533 30646 . - 0 ID=cds-AC00_RS31350;Parent=gene-AC00_RS31350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=30646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418146.4;locus_tag=AC00_RS31350;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 30782 31438 . + . ID=gene-AC00_RS04965;Name=yidX;gbkey=Gene;gene=yidX;gene_biotype=protein_coding;locus_tag=AC00_RS04965;old_locus_tag=AC00_4212 NZ_JJLU01000119.1 Protein Homology CDS 30782 31438 . + 0 ID=cds-WP_000772950.1;Parent=gene-AC00_RS04965;Dbxref=GenBank:WP_000772950.1;Name=WP_000772950.1;gbkey=CDS;gene=yidX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312658.1;locus_tag=AC00_RS04965;product=protein YidX;protein_id=WP_000772950.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 31484 32296 . - . ID=gene-AC00_RS04960;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=AC00_RS04960;old_locus_tag=AC00_4213 NZ_JJLU01000119.1 Protein Homology CDS 31484 32296 . - 0 ID=cds-WP_032281875.1;Parent=gene-AC00_RS04960;Dbxref=GenBank:WP_032281875.1;Name=WP_032281875.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=AC00_RS04960;product=sugar-phosphatase;protein_id=WP_032281875.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 32411 32809 . - . ID=gene-AC00_RS04955;Name=yidB;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=AC00_RS04955;old_locus_tag=AC00_4214 NZ_JJLU01000119.1 Protein Homology CDS 32411 32809 . - 0 ID=cds-WP_032281876.1;Parent=gene-AC00_RS04955;Dbxref=GenBank:WP_032281876.1;Name=WP_032281876.1;gbkey=CDS;gene=yidB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418153.4;locus_tag=AC00_RS04955;product=YidB family protein;protein_id=WP_032281876.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 33049 35463 . - . ID=gene-AC00_RS04950;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AC00_RS04950;old_locus_tag=AC00_4215 NZ_JJLU01000119.1 Protein Homology CDS 33049 35463 . - 0 ID=cds-WP_023308491.1;Parent=gene-AC00_RS04950;Dbxref=GenBank:WP_023308491.1;Name=WP_023308491.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=AC00_RS04950;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_023308491.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 35492 36565 . - . ID=gene-AC00_RS04945;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AC00_RS04945;old_locus_tag=AC00_4216 NZ_JJLU01000119.1 Protein Homology CDS 35492 36565 . - 0 ID=cds-WP_000060112.1;Parent=gene-AC00_RS04945;Dbxref=GenBank:WP_000060112.1;Name=WP_000060112.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=AC00_RS04945;product=DNA replication/repair protein RecF;protein_id=WP_000060112.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 36565 37665 . - . ID=gene-AC00_RS04940;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AC00_RS04940;old_locus_tag=AC00_4217 NZ_JJLU01000119.1 Protein Homology CDS 36565 37665 . - 0 ID=cds-WP_000673464.1;Parent=gene-AC00_RS04940;Dbxref=GenBank:WP_000673464.1;Name=WP_000673464.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=AC00_RS04940;product=DNA polymerase III subunit beta;protein_id=WP_000673464.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 37670 39073 . - . ID=gene-AC00_RS04935;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AC00_RS04935;old_locus_tag=AC00_4218 NZ_JJLU01000119.1 Protein Homology CDS 37670 39073 . - 0 ID=cds-WP_032281878.1;Parent=gene-AC00_RS04935;Dbxref=GenBank:WP_032281878.1;Name=WP_032281878.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418157.1;locus_tag=AC00_RS04935;product=chromosomal replication initiator protein DnaA;protein_id=WP_032281878.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 39370 39450 . + . ID=gene-AC00_RS30565;Name=AC00_RS30565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30565 NZ_JJLU01000119.1 Protein Homology CDS 39370 39450 . + 0 ID=cds-WP_120795392.1;Parent=gene-AC00_RS30565;Dbxref=GenBank:WP_120795392.1;Name=WP_120795392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518826.1;locus_tag=AC00_RS30565;product=protein YsdD;protein_id=WP_120795392.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 39680 39820 . + . ID=gene-AC00_RS04930;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AC00_RS04930;old_locus_tag=AC00_4219 NZ_JJLU01000119.1 Protein Homology CDS 39680 39820 . + 0 ID=cds-WP_000831330.1;Parent=gene-AC00_RS04930;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=AC00_RS04930;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 39837 40196 . + . ID=gene-AC00_RS04925;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AC00_RS04925;old_locus_tag=AC00_4220 NZ_JJLU01000119.1 Protein Homology CDS 39837 40196 . + 0 ID=cds-WP_000239730.1;Parent=gene-AC00_RS04925;Dbxref=GenBank:WP_000239730.1;Name=WP_000239730.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=AC00_RS04925;product=ribonuclease P protein component;protein_id=WP_000239730.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 40160 40417 . + . ID=gene-AC00_RS0125725;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=AC00_RS0125725 NZ_JJLU01000119.1 Protein Homology CDS 40160 40417 . + 0 ID=cds-WP_001307474.1;Parent=gene-AC00_RS0125725;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=AC00_RS0125725;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 40420 42066 . + . ID=gene-AC00_RS04920;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AC00_RS04920;old_locus_tag=AC00_4221 NZ_JJLU01000119.1 Protein Homology CDS 40420 42066 . + 0 ID=cds-WP_000378250.1;Parent=gene-AC00_RS04920;Dbxref=GenBank:WP_000378250.1;Name=WP_000378250.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418161.1;locus_tag=AC00_RS04920;product=membrane protein insertase YidC;protein_id=WP_000378250.1;transl_table=11 NZ_JJLU01000119.1 RefSeq gene 42138 43502 . + . ID=gene-AC00_RS04915;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AC00_RS04915;old_locus_tag=AC00_4222 NZ_JJLU01000119.1 Protein Homology CDS 42138 43502 . + 0 ID=cds-WP_032281765.1;Parent=gene-AC00_RS04915;Dbxref=GenBank:WP_032281765.1;Name=WP_032281765.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418162.1;locus_tag=AC00_RS04915;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_032281765.1;transl_table=11 NZ_JJLU01000119.1 RefSeq pseudogene 43803 44103 . - . ID=gene-AC00_RS04910;Name=AC00_RS04910;end_range=44103,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS04910;old_locus_tag=AC00_4223;partial=true;pseudo=true NZ_JJLU01000119.1 Protein Homology CDS 43803 44103 . - 1 ID=cds-AC00_RS04910;Parent=gene-AC00_RS04910;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=44103,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS04910;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000120.1 1 8912 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000120.1 RefSeq region 1 8912 . + . ID=NZ_JJLU01000120.1:1..8912;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000120.1 RefSeq gene 1 190 . - . ID=gene-AC00_RS04905;Name=AC00_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04905;old_locus_tag=AC00_4224;partial=true;start_range=.,1 NZ_JJLU01000120.1 Protein Homology CDS 1 190 . - 0 ID=cds-WP_000179196.1-2;Parent=gene-AC00_RS04905;Dbxref=GenBank:WP_000179196.1;Name=WP_000179196.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558268.1;locus_tag=AC00_RS04905;partial=true;product=IS1 family transposase;protein_id=WP_000179196.1;start_range=.,1;transl_table=11 NZ_JJLU01000120.1 RefSeq pseudogene 248 325 . + . ID=gene-AC00_RS31355;Name=AC00_RS31355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31355;partial=true;pseudo=true;start_range=.,248 NZ_JJLU01000120.1 Protein Homology CDS 248 325 . + 0 ID=cds-AC00_RS31355;Parent=gene-AC00_RS31355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312673.1;locus_tag=AC00_RS31355;partial=true;product=hypothetical protein;pseudo=true;start_range=.,248;transl_table=11 NZ_JJLU01000120.1 RefSeq gene 457 1632 . + . ID=gene-AC00_RS04900;Name=mdtL;gbkey=Gene;gene=mdtL;gene_biotype=protein_coding;locus_tag=AC00_RS04900;old_locus_tag=AC00_4225 NZ_JJLU01000120.1 Protein Homology CDS 457 1632 . + 0 ID=cds-WP_032281884.1;Parent=gene-AC00_RS04900;Dbxref=GenBank:WP_032281884.1;Name=WP_032281884.1;gbkey=CDS;gene=mdtL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312674.1;locus_tag=AC00_RS04900;product=multidrug efflux MFS transporter MdtL;protein_id=WP_032281884.1;transl_table=11 NZ_JJLU01000120.1 RefSeq gene 1607 2566 . + . ID=gene-AC00_RS04895;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=AC00_RS04895;old_locus_tag=AC00_4226 NZ_JJLU01000120.1 Protein Homology CDS 1607 2566 . + 0 ID=cds-WP_001362496.1;Parent=gene-AC00_RS04895;Dbxref=GenBank:WP_001362496.1;Name=WP_001362496.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312675.1;locus_tag=AC00_RS04895;product=HTH-type transcriptional regulator YidZ;protein_id=WP_001362496.1;transl_table=11 NZ_JJLU01000120.1 RefSeq gene 2723 3472 . + . ID=gene-AC00_RS0125735;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=AC00_RS0125735;old_locus_tag=AC00_4227 NZ_JJLU01000120.1 Protein Homology CDS 2723 3472 . + 0 ID=cds-WP_001296581.1;Parent=gene-AC00_RS0125735;Dbxref=GenBank:WP_001296581.1;Name=WP_001296581.1;Ontology_term=GO:0008897;gbkey=CDS;gene=yieE;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418168.2;locus_tag=AC00_RS0125735;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_001296581.1;transl_table=11 NZ_JJLU01000120.1 RefSeq gene 3494 4060 . + . ID=gene-AC00_RS04890;Name=yieF;gbkey=Gene;gene=yieF;gene_biotype=protein_coding;gene_synonym=chrR;locus_tag=AC00_RS04890;old_locus_tag=AC00_4228 NZ_JJLU01000120.1 Protein Homology CDS 3494 4060 . + 0 ID=cds-WP_021578122.1;Parent=gene-AC00_RS04890;Dbxref=GenBank:WP_021578122.1;Name=WP_021578122.1;gbkey=CDS;gene=yieF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312677.1;locus_tag=AC00_RS04890;product=class I chromate reductase YieF;protein_id=WP_021578122.1;transl_table=11 NZ_JJLU01000120.1 RefSeq gene 4114 5451 . - . ID=gene-AC00_RS04885;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=AC00_RS04885;old_locus_tag=AC00_4229 NZ_JJLU01000120.1 Protein Homology CDS 4114 5451 . - 0 ID=cds-WP_001301685.1;Parent=gene-AC00_RS04885;Dbxref=GenBank:WP_001301685.1;Name=WP_001301685.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=AC00_RS04885;product=adenine permease AdeP;protein_id=WP_001301685.1;transl_table=11 NZ_JJLU01000120.1 RefSeq gene 5618 6283 . + . ID=gene-AC00_RS04880;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=AC00_RS04880;old_locus_tag=AC00_4230 NZ_JJLU01000120.1 Protein Homology CDS 5618 6283 . + 0 ID=cds-WP_000078062.1;Parent=gene-AC00_RS04880;Dbxref=GenBank:WP_000078062.1;Name=WP_000078062.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312679.1;locus_tag=AC00_RS04880;product=6-phosphogluconate phosphatase;protein_id=WP_000078062.1;transl_table=11 NZ_JJLU01000120.1 RefSeq pseudogene 6420 8672 . - . ID=gene-AC00_RS30570;Name=AC00_RS30570;end_range=8672,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30570;old_locus_tag=AC00_4231;partial=true;pseudo=true NZ_JJLU01000120.1 Protein Homology CDS 6420 8672 . - 0 ID=cds-AC00_RS30570;Parent=gene-AC00_RS30570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=8672,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000225959.1;locus_tag=AC00_RS30570;partial=true;product=type III effector;pseudo=true;transl_table=11 NZ_JJLU01000120.1 RefSeq gene 8679 8912 . - . ID=gene-AC00_RS04870;Name=AC00_RS04870;end_range=8912,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04870;old_locus_tag=AC00_4232;partial=true NZ_JJLU01000120.1 Protein Homology CDS 8679 8912 . - 0 ID=cds-WP_000313483.1;Parent=gene-AC00_RS04870;Dbxref=GenBank:WP_000313483.1;Name=WP_000313483.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=8912,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS04870;partial=true;product=IS1 family transposase;protein_id=WP_000313483.1;transl_table=11 ##sequence-region NZ_JJLU01000121.1 1 36756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000121.1 RefSeq region 1 36756 . + . ID=NZ_JJLU01000121.1:1..36756;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000121.1 RefSeq pseudogene 1 276 . - . ID=gene-AC00_RS04865;Name=AC00_RS04865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS04865;old_locus_tag=AC00_4233;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000121.1 Protein Homology CDS 1 276 . - 0 ID=cds-AC00_RS04865;Parent=gene-AC00_RS04865;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS04865;partial=true;product=IS1-like element transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000121.1 RefSeq pseudogene 330 1364 . - . ID=gene-AC00_RS04860;Name=AC00_RS04860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS04860;old_locus_tag=AC00_4234;partial=true;pseudo=true;start_range=.,330 NZ_JJLU01000121.1 Protein Homology CDS 330 1364 . - 0 ID=cds-AC00_RS04860;Parent=gene-AC00_RS04860;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001310363.1;locus_tag=AC00_RS04860;partial=true;product=type III effector protein;pseudo=true;start_range=.,330;transl_table=11 NZ_JJLU01000121.1 RefSeq pseudogene 1331 1466 . - . ID=gene-AC00_RS30575;Name=AC00_RS30575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30575;pseudo=true NZ_JJLU01000121.1 Protein Homology CDS 1331 1466 . - 0 ID=cds-AC00_RS30575;Parent=gene-AC00_RS30575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_307391.1;locus_tag=AC00_RS30575;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 1891 2616 . - . ID=gene-AC00_RS04855;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=AC00_RS04855;old_locus_tag=AC00_4236 NZ_JJLU01000121.1 Protein Homology CDS 1891 2616 . - 0 ID=cds-WP_000377785.1;Parent=gene-AC00_RS04855;Dbxref=GenBank:WP_000377785.1;Name=WP_000377785.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312687.1;locus_tag=AC00_RS04855;product=phosphate signaling complex protein PhoU;protein_id=WP_000377785.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 2631 3404 . - . ID=gene-AC00_RS04850;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=AC00_RS04850;old_locus_tag=AC00_4237 NZ_JJLU01000121.1 Protein Homology CDS 2631 3404 . - 0 ID=cds-WP_000063125.1;Parent=gene-AC00_RS04850;Dbxref=GenBank:WP_000063125.1;Name=WP_000063125.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=AC00_RS04850;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_000063125.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 3581 4471 . - . ID=gene-AC00_RS04845;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=AC00_RS04845;old_locus_tag=AC00_4238 NZ_JJLU01000121.1 Protein Homology CDS 3581 4471 . - 0 ID=cds-WP_001426463.1;Parent=gene-AC00_RS04845;Dbxref=GenBank:WP_001426463.1;Name=WP_001426463.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312689.1;locus_tag=AC00_RS04845;product=phosphate ABC transporter permease PstA;protein_id=WP_001426463.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 4471 5430 . - . ID=gene-AC00_RS04840;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=AC00_RS04840;old_locus_tag=AC00_4239 NZ_JJLU01000121.1 Protein Homology CDS 4471 5430 . - 0 ID=cds-WP_000741620.1;Parent=gene-AC00_RS04840;Dbxref=GenBank:WP_000741620.1;Name=WP_000741620.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=AC00_RS04840;product=phosphate ABC transporter permease PstC;protein_id=WP_000741620.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 5517 6557 . - . ID=gene-AC00_RS04835;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=AC00_RS04835;old_locus_tag=AC00_4240 NZ_JJLU01000121.1 Protein Homology CDS 5517 6557 . - 0 ID=cds-WP_000867143.1;Parent=gene-AC00_RS04835;Dbxref=GenBank:WP_000867143.1;Name=WP_000867143.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312691.1;locus_tag=AC00_RS04835;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_000867143.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 6871 8700 . - . ID=gene-AC00_RS04830;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AC00_RS04830;old_locus_tag=AC00_4241 NZ_JJLU01000121.1 Protein Homology CDS 6871 8700 . - 0 ID=cds-WP_000334096.1;Parent=gene-AC00_RS04830;Dbxref=GenBank:WP_000334096.1;Name=WP_000334096.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=AC00_RS04830;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_000334096.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 8862 10232 . - . ID=gene-AC00_RS04825;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AC00_RS04825;old_locus_tag=AC00_4242 NZ_JJLU01000121.1 Protein Homology CDS 8862 10232 . - 0 ID=cds-WP_032281887.1;Parent=gene-AC00_RS04825;Dbxref=GenBank:WP_032281887.1;Name=WP_032281887.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=AC00_RS04825;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_032281887.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 10620 11039 . - . ID=gene-AC00_RS04820;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AC00_RS04820;old_locus_tag=AC00_4243 NZ_JJLU01000121.1 Protein Homology CDS 10620 11039 . - 0 ID=cds-WP_001251965.1;Parent=gene-AC00_RS04820;Dbxref=GenBank:WP_001251965.1;Name=WP_001251965.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;gene=atpC;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=AC00_RS04820;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251965.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 11060 12442 . - . ID=gene-AC00_RS04815;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AC00_RS04815;old_locus_tag=AC00_4244 NZ_JJLU01000121.1 Protein Homology CDS 11060 12442 . - 0 ID=cds-WP_000190506.1;Parent=gene-AC00_RS04815;Dbxref=GenBank:WP_000190506.1;Name=WP_000190506.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=AC00_RS04815;product=F0F1 ATP synthase subunit beta;protein_id=WP_000190506.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 12469 13332 . - . ID=gene-AC00_RS04810;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=AC00_RS04810;old_locus_tag=AC00_4245 NZ_JJLU01000121.1 Protein Homology CDS 12469 13332 . - 0 ID=cds-WP_032281889.1;Parent=gene-AC00_RS04810;Dbxref=GenBank:WP_032281889.1;Name=WP_032281889.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=AC00_RS04810;product=F0F1 ATP synthase subunit gamma;protein_id=WP_032281889.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 13383 14924 . - . ID=gene-AC00_RS04805;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AC00_RS04805;old_locus_tag=AC00_4246 NZ_JJLU01000121.1 Protein Homology CDS 13383 14924 . - 0 ID=cds-WP_001176745.1;Parent=gene-AC00_RS04805;Dbxref=GenBank:WP_001176745.1;Name=WP_001176745.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=AC00_RS04805;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001176745.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 14937 15470 . - . ID=gene-AC00_RS04800;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=AC00_RS04800;old_locus_tag=AC00_4247 NZ_JJLU01000121.1 Protein Homology CDS 14937 15470 . - 0 ID=cds-WP_001288587.1;Parent=gene-AC00_RS04800;Dbxref=GenBank:WP_001288587.1;Name=WP_001288587.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=AC00_RS04800;product=F0F1 ATP synthase subunit delta;protein_id=WP_001288587.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 15485 15955 . - . ID=gene-AC00_RS04795;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=AC00_RS04795;old_locus_tag=AC00_4248 NZ_JJLU01000121.1 Protein Homology CDS 15485 15955 . - 0 ID=cds-WP_001052219.1;Parent=gene-AC00_RS04795;Dbxref=GenBank:WP_001052219.1;Name=WP_001052219.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=AC00_RS04795;product=F0F1 ATP synthase subunit B;protein_id=WP_001052219.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 16017 16256 . - . ID=gene-AC00_RS04790;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=AC00_RS04790;old_locus_tag=AC00_4249 NZ_JJLU01000121.1 Protein Homology CDS 16017 16256 . - 0 ID=cds-WP_000429386.1;Parent=gene-AC00_RS04790;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=AC00_RS04790;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 16303 17118 . - . ID=gene-AC00_RS04785;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AC00_RS04785;old_locus_tag=AC00_4250 NZ_JJLU01000121.1 Protein Homology CDS 16303 17118 . - 0 ID=cds-WP_000135625.1;Parent=gene-AC00_RS04785;Dbxref=GenBank:WP_000135625.1;Name=WP_000135625.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=AC00_RS04785;product=F0F1 ATP synthase subunit A;protein_id=WP_000135625.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 17127 17507 . - . ID=gene-AC00_RS0125750;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=AC00_RS0125750 NZ_JJLU01000121.1 Protein Homology CDS 17127 17507 . - 0 ID=cds-WP_000116695.1;Parent=gene-AC00_RS0125750;Dbxref=GenBank:WP_000116695.1;Name=WP_000116695.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418195.2;locus_tag=AC00_RS0125750;product=F0F1 ATP synthase subunit I;protein_id=WP_000116695.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 18124 18747 . - . ID=gene-AC00_RS04780;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=AC00_RS04780;old_locus_tag=AC00_4252 NZ_JJLU01000121.1 Protein Homology CDS 18124 18747 . - 0 ID=cds-WP_032281890.1;Parent=gene-AC00_RS04780;Dbxref=GenBank:WP_032281890.1;Name=WP_032281890.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312709.1;locus_tag=AC00_RS04780;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_032281890.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 18811 20700 . - . ID=gene-AC00_RS04775;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=AC00_RS04775;old_locus_tag=AC00_4253 NZ_JJLU01000121.1 Protein Homology CDS 18811 20700 . - 0 ID=cds-WP_032281891.1;Parent=gene-AC00_RS04775;Dbxref=GenBank:WP_032281891.1;Name=WP_032281891.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=AC00_RS04775;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_032281891.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 21079 21522 . - . ID=gene-AC00_RS04770;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=AC00_RS04770;old_locus_tag=AC00_4254 NZ_JJLU01000121.1 Protein Homology CDS 21079 21522 . - 0 ID=cds-WP_000763742.1;Parent=gene-AC00_RS04770;Dbxref=GenBank:WP_000763742.1;Name=WP_000763742.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312711.1;locus_tag=AC00_RS04770;product=FMN-binding protein MioC;protein_id=WP_000763742.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 21612 22070 . - . ID=gene-AC00_RS04765;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=AC00_RS04765;old_locus_tag=AC00_4255 NZ_JJLU01000121.1 Protein Homology CDS 21612 22070 . - 0 ID=cds-WP_000432970.1;Parent=gene-AC00_RS04765;Dbxref=GenBank:WP_000432970.1;Name=WP_000432970.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=AC00_RS04765;product=transcriptional regulator AsnC;protein_id=WP_000432970.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 22222 23214 . + . ID=gene-AC00_RS04760;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=AC00_RS04760;old_locus_tag=AC00_4256 NZ_JJLU01000121.1 Protein Homology CDS 22222 23214 . + 0 ID=cds-WP_000845107.1;Parent=gene-AC00_RS04760;Dbxref=GenBank:WP_000845107.1;Name=WP_000845107.1;Ontology_term=GO:0006529,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312713.1;locus_tag=AC00_RS04760;product=aspartate--ammonia ligase;protein_id=WP_000845107.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 23219 24670 . - . ID=gene-AC00_RS04755;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=AC00_RS04755;old_locus_tag=AC00_4257 NZ_JJLU01000121.1 Protein Homology CDS 23219 24670 . - 0 ID=cds-WP_032281892.1;Parent=gene-AC00_RS04755;Dbxref=GenBank:WP_032281892.1;Name=WP_032281892.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=AC00_RS04755;product=ATPase RavA stimulator ViaA;protein_id=WP_032281892.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 24664 26160 . - . ID=gene-AC00_RS04750;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=AC00_RS04750;old_locus_tag=AC00_4258 NZ_JJLU01000121.1 Protein Homology CDS 24664 26160 . - 0 ID=cds-WP_001315921.1;Parent=gene-AC00_RS04750;Dbxref=GenBank:WP_001315921.1;Name=WP_001315921.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418202.4;locus_tag=AC00_RS04750;product=ATPase RavA;protein_id=WP_001315921.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 26383 28251 . + . ID=gene-AC00_RS04745;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=AC00_RS04745;old_locus_tag=AC00_4259 NZ_JJLU01000121.1 Protein Homology CDS 26383 28251 . + 0 ID=cds-WP_000102319.1;Parent=gene-AC00_RS04745;Dbxref=GenBank:WP_000102319.1;Name=WP_000102319.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=AC00_RS04745;product=low affinity potassium transporter Kup;protein_id=WP_000102319.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 28418 28837 . + . ID=gene-AC00_RS04740;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=AC00_RS04740;old_locus_tag=AC00_4260 NZ_JJLU01000121.1 Protein Homology CDS 28418 28837 . + 0 ID=cds-WP_000715936.1;Parent=gene-AC00_RS04740;Dbxref=GenBank:WP_000715936.1;Name=WP_000715936.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709562.2;locus_tag=AC00_RS04740;product=D-ribose pyranase;protein_id=WP_000715936.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 28845 30350 . + . ID=gene-AC00_RS04735;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=AC00_RS04735;old_locus_tag=AC00_4261 NZ_JJLU01000121.1 Protein Homology CDS 28845 30350 . + 0 ID=cds-WP_000387770.1;Parent=gene-AC00_RS04735;Dbxref=GenBank:WP_000387770.1;Name=WP_000387770.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=AC00_RS04735;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_000387770.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 30355 31320 . + . ID=gene-AC00_RS04730;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AC00_RS04730;old_locus_tag=AC00_4262 NZ_JJLU01000121.1 Protein Homology CDS 30355 31320 . + 0 ID=cds-WP_000211858.1;Parent=gene-AC00_RS04730;Dbxref=GenBank:WP_000211858.1;Name=WP_000211858.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=AC00_RS04730;product=ribose ABC transporter permease;protein_id=WP_000211858.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 31345 32235 . + . ID=gene-AC00_RS04725;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=AC00_RS04725;old_locus_tag=AC00_4263 NZ_JJLU01000121.1 Protein Homology CDS 31345 32235 . + 0 ID=cds-WP_001056273.1;Parent=gene-AC00_RS04725;Dbxref=GenBank:WP_001056273.1;Name=WP_001056273.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=AC00_RS04725;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_001056273.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 32371 33300 . + . ID=gene-AC00_RS04720;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=AC00_RS04720;old_locus_tag=AC00_4264 NZ_JJLU01000121.1 Protein Homology CDS 32371 33300 . + 0 ID=cds-WP_032281895.1;Parent=gene-AC00_RS04720;Dbxref=GenBank:WP_032281895.1;Name=WP_032281895.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312721.1;locus_tag=AC00_RS04720;product=ribokinase;protein_id=WP_032281895.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 33304 34296 . + . ID=gene-AC00_RS04715;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=AC00_RS04715;old_locus_tag=AC00_4265 NZ_JJLU01000121.1 Protein Homology CDS 33304 34296 . + 0 ID=cds-WP_000224466.1;Parent=gene-AC00_RS04715;Dbxref=GenBank:WP_000224466.1;Name=WP_000224466.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=AC00_RS04715;product=ribose operon transcriptional repressor RbsR;protein_id=WP_000224466.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 34262 35689 . - . ID=gene-AC00_RS0125755;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=AC00_RS0125755 NZ_JJLU01000121.1 Protein Homology CDS 34262 35689 . - 0 ID=cds-WP_032281893.1;Parent=gene-AC00_RS0125755;Dbxref=GenBank:WP_032281893.1;Name=WP_032281893.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312723.1;locus_tag=AC00_RS0125755;product=multidrug transporter subunit MdtD;protein_id=WP_032281893.1;transl_table=11 NZ_JJLU01000121.1 RefSeq gene 35712 36404 . - . ID=gene-AC00_RS04710;Name=yieP;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=AC00_RS04710;old_locus_tag=AC00_4268 NZ_JJLU01000121.1 Protein Homology CDS 35712 36404 . - 0 ID=cds-WP_001131179.1;Parent=gene-AC00_RS04710;Dbxref=GenBank:WP_001131179.1;Name=WP_001131179.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;gene=yieP;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312724.2;locus_tag=AC00_RS04710;product=FadR/GntR family transcriptional regulator;protein_id=WP_001131179.1;transl_table=11 ##sequence-region NZ_JJLU01000122.1 1 1451 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000122.1 RefSeq region 1 1451 . + . ID=NZ_JJLU01000122.1:1..1451;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000122.1 RefSeq gene 1 869 . + . ID=gene-AC00_RS0125760;Name=AC00_RS0125760;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS0125760;partial=true;start_range=.,1 NZ_JJLU01000122.1 cmsearch rRNA 1 869 . + . ID=rna-AC00_RS0125760;Parent=gene-AC00_RS0125760;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125760;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000122.1 cmsearch exon 1 869 . + . ID=exon-AC00_RS0125760-1;Parent=rna-AC00_RS0125760;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125760;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000122.1 RefSeq gene 938 1014 . + . ID=gene-AC00_RS04705;Name=AC00_RS04705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04705;old_locus_tag=AC00_4269 NZ_JJLU01000122.1 tRNAscan-SE tRNA 938 1014 . + . ID=rna-AC00_RS04705;Parent=gene-AC00_RS04705;anticodon=(pos:972..974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04705;product=tRNA-Ile NZ_JJLU01000122.1 tRNAscan-SE exon 938 1014 . + . ID=exon-AC00_RS04705-1;Parent=rna-AC00_RS04705;anticodon=(pos:972..974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04705;product=tRNA-Ile NZ_JJLU01000122.1 RefSeq gene 1057 1132 . + . ID=gene-AC00_RS04700;Name=AC00_RS04700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04700;old_locus_tag=AC00_4270 NZ_JJLU01000122.1 tRNAscan-SE tRNA 1057 1132 . + . ID=rna-AC00_RS04700;Parent=gene-AC00_RS04700;anticodon=(pos:1090..1092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04700;product=tRNA-Ala NZ_JJLU01000122.1 tRNAscan-SE exon 1057 1132 . + . ID=exon-AC00_RS04700-1;Parent=rna-AC00_RS04700;anticodon=(pos:1090..1092);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04700;product=tRNA-Ala NZ_JJLU01000122.1 RefSeq gene 1316 1451 . + . ID=gene-AC00_RS0125765;Name=AC00_RS0125765;end_range=1451,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS0125765;partial=true NZ_JJLU01000122.1 cmsearch rRNA 1316 1451 . + . ID=rna-AC00_RS0125765;Parent=gene-AC00_RS0125765;Dbxref=RFAM:RF02541;end_range=1451,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125765;partial=true;product=23S ribosomal RNA NZ_JJLU01000122.1 cmsearch exon 1316 1451 . + . ID=exon-AC00_RS0125765-1;Parent=rna-AC00_RS0125765;Dbxref=RFAM:RF02541;end_range=1451,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125765;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JJLU01000123.1 1 417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000123.1 RefSeq region 1 417 . + . ID=NZ_JJLU01000123.1:1..417;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000123.1 RefSeq gene 1 417 . + . ID=gene-AC00_RS0125770;Name=AC00_RS0125770;end_range=417,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS0125770;partial=true;start_range=.,1 NZ_JJLU01000123.1 cmsearch rRNA 1 417 . + . ID=rna-AC00_RS0125770;Parent=gene-AC00_RS0125770;Dbxref=RFAM:RF02541;end_range=417,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125770;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JJLU01000123.1 cmsearch exon 1 417 . + . ID=exon-AC00_RS0125770-1;Parent=rna-AC00_RS0125770;Dbxref=RFAM:RF02541;end_range=417,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0125770;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJLU01000124.1 1 2814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000124.1 RefSeq region 1 2814 . + . ID=NZ_JJLU01000124.1:1..2814;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000124.1 RefSeq gene 70 185 . + . ID=gene-AC00_RS04695;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS04695;old_locus_tag=AC00_4272 NZ_JJLU01000124.1 cmsearch rRNA 70 185 . + . ID=rna-AC00_RS04695;Parent=gene-AC00_RS04695;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS04695;product=5S ribosomal RNA NZ_JJLU01000124.1 cmsearch exon 70 185 . + . ID=exon-AC00_RS04695-1;Parent=rna-AC00_RS04695;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS04695;product=5S ribosomal RNA NZ_JJLU01000124.1 RefSeq gene 240 316 . + . ID=gene-AC00_RS04690;Name=AC00_RS04690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04690;old_locus_tag=AC00_4273 NZ_JJLU01000124.1 tRNAscan-SE tRNA 240 316 . + . ID=rna-AC00_RS04690;Parent=gene-AC00_RS04690;anticodon=(pos:274..276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04690;product=tRNA-Asp NZ_JJLU01000124.1 tRNAscan-SE exon 240 316 . + . ID=exon-AC00_RS04690-1;Parent=rna-AC00_RS04690;anticodon=(pos:274..276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04690;product=tRNA-Asp NZ_JJLU01000124.1 RefSeq gene 325 400 . + . ID=gene-AC00_RS04685;Name=AC00_RS04685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04685;old_locus_tag=AC00_4274 NZ_JJLU01000124.1 tRNAscan-SE tRNA 325 400 . + . ID=rna-AC00_RS04685;Parent=gene-AC00_RS04685;anticodon=(pos:358..360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04685;product=tRNA-Trp NZ_JJLU01000124.1 tRNAscan-SE exon 325 400 . + . ID=exon-AC00_RS04685-1;Parent=rna-AC00_RS04685;anticodon=(pos:358..360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04685;product=tRNA-Trp NZ_JJLU01000124.1 RefSeq gene 496 1335 . - . ID=gene-AC00_RS04680;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=AC00_RS04680;old_locus_tag=AC00_4275 NZ_JJLU01000124.1 Protein Homology CDS 496 1335 . - 0 ID=cds-WP_001406292.1;Parent=gene-AC00_RS04680;Dbxref=GenBank:WP_001406292.1;Name=WP_001406292.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312725.1;locus_tag=AC00_RS04680;product=HTH-type transcriptional regulator HdfR;protein_id=WP_001406292.1;transl_table=11 NZ_JJLU01000124.1 RefSeq gene 1454 1792 . + . ID=gene-AC00_RS04675;Name=maoP;gbkey=Gene;gene=maoP;gene_biotype=protein_coding;locus_tag=AC00_RS04675;old_locus_tag=AC00_4276 NZ_JJLU01000124.1 Protein Homology CDS 1454 1792 . + 0 ID=cds-WP_000841001.1;Parent=gene-AC00_RS04675;Dbxref=GenBank:WP_000841001.1;Name=WP_000841001.1;gbkey=CDS;gene=maoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=AC00_RS04675;product=macrodomain Ori organization protein MaoP;protein_id=WP_000841001.1;transl_table=11 NZ_JJLU01000124.1 RefSeq pseudogene 1817 2527 . - . ID=gene-AC00_RS04670;Name=AC00_RS04670;end_range=2527,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS04670;old_locus_tag=AC00_4277;partial=true;pseudo=true NZ_JJLU01000124.1 Protein Homology CDS 1817 2527 . - 0 ID=cds-AC00_RS04670;Parent=gene-AC00_RS04670;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=2527,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312727.2;locus_tag=AC00_RS04670;partial=true;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;transl_table=11 NZ_JJLU01000124.1 RefSeq gene 2583 2814 . + . ID=gene-AC00_RS28470;Name=AC00_RS28470;end_range=2814,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28470;old_locus_tag=AC00_4278;partial=true NZ_JJLU01000124.1 Protein Homology CDS 2583 2814 . + 0 ID=cds-WP_001397795.1-5;Parent=gene-AC00_RS28470;Dbxref=GenBank:WP_001397795.1;Name=WP_001397795.1;Ontology_term=GO:0006313;end_range=2814,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28470;partial=true;product=IS1 family transposase;protein_id=WP_001397795.1;transl_table=11 ##sequence-region NZ_JJLU01000125.1 1 86375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000125.1 RefSeq region 1 86375 . + . ID=NZ_JJLU01000125.1:1..86375;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000125.1 RefSeq gene 1 281 . + . ID=gene-AC00_RS28475;Name=AC00_RS28475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28475;partial=true;start_range=.,1 NZ_JJLU01000125.1 Protein Homology CDS 1 281 . + 2 ID=cds-WP_000431025.1-3;Parent=gene-AC00_RS28475;Dbxref=GenBank:WP_000431025.1;Name=WP_000431025.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28475;partial=true;product=IS1 family transposase;protein_id=WP_000431025.1;start_range=.,1;transl_table=11 NZ_JJLU01000125.1 RefSeq pseudogene 297 1115 . - . ID=gene-AC00_RS04665;Name=AC00_RS04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS04665;old_locus_tag=AC00_4279;partial=true;pseudo=true;start_range=.,297 NZ_JJLU01000125.1 Protein Homology CDS 297 1115 . - 0 ID=cds-AC00_RS04665;Parent=gene-AC00_RS04665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418214.2;locus_tag=AC00_RS04665;partial=true;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;start_range=.,297;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 1457 1555 . + . ID=gene-AC00_RS0125775;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=AC00_RS0125775 NZ_JJLU01000125.1 Protein Homology CDS 1457 1555 . + 0 ID=cds-WP_001311244.1;Parent=gene-AC00_RS0125775;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=AC00_RS0125775;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 1642 1692 . + . ID=gene-AC00_RS30580;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=AC00_RS30580 NZ_JJLU01000125.1 Protein Homology CDS 1642 1692 . + 0 ID=cds-WP_001387183.1;Parent=gene-AC00_RS30580;Dbxref=GenBank:WP_001387183.1;Name=WP_001387183.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=AC00_RS30580;product=peptide IlvX;protein_id=WP_001387183.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 1695 3341 . + . ID=gene-AC00_RS04660;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=AC00_RS04660;old_locus_tag=AC00_4280 NZ_JJLU01000125.1 Protein Homology CDS 1695 3341 . + 0 ID=cds-WP_032281903.1;Parent=gene-AC00_RS04660;Dbxref=GenBank:WP_032281903.1;Name=WP_032281903.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=AC00_RS04660;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_032281903.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 3338 3601 . + . ID=gene-AC00_RS04655;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=AC00_RS04655;old_locus_tag=AC00_4281 NZ_JJLU01000125.1 Protein Homology CDS 3338 3601 . + 0 ID=cds-WP_000983255.1;Parent=gene-AC00_RS04655;Dbxref=GenBank:WP_000983255.1;Name=WP_000983255.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=AC00_RS04655;product=acetolactate synthase 2 small subunit;protein_id=WP_000983255.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 3621 4550 . + . ID=gene-AC00_RS04650;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=AC00_RS04650;old_locus_tag=AC00_4282 NZ_JJLU01000125.1 Protein Homology CDS 3621 4550 . + 0 ID=cds-WP_000208520.1;Parent=gene-AC00_RS04650;Dbxref=GenBank:WP_000208520.1;Name=WP_000208520.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312731.1;locus_tag=AC00_RS04650;product=branched-chain-amino-acid transaminase;protein_id=WP_000208520.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 4615 6465 . + . ID=gene-AC00_RS04645;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=AC00_RS04645;old_locus_tag=AC00_4283 NZ_JJLU01000125.1 Protein Homology CDS 4615 6465 . + 0 ID=cds-WP_001562362.1;Parent=gene-AC00_RS04645;Dbxref=GenBank:WP_001562362.1;Name=WP_001562362.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=AC00_RS04645;product=dihydroxy-acid dehydratase;protein_id=WP_001562362.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 6468 8012 . + . ID=gene-AC00_RS04640;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=AC00_RS04640;old_locus_tag=AC00_4284 NZ_JJLU01000125.1 Protein Homology CDS 6468 8012 . + 0 ID=cds-WP_000785599.1;Parent=gene-AC00_RS04640;Dbxref=GenBank:WP_000785599.1;Name=WP_000785599.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=AC00_RS04640;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_000785599.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 8009 8899 . - . ID=gene-AC00_RS04635;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=AC00_RS04635;old_locus_tag=AC00_4285 NZ_JJLU01000125.1 Protein Homology CDS 8009 8899 . - 0 ID=cds-WP_000365790.1;Parent=gene-AC00_RS04635;Dbxref=GenBank:WP_000365790.1;Name=WP_000365790.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001053418.1;locus_tag=AC00_RS04635;product=HTH-type transcriptional activator IlvY;protein_id=WP_000365790.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 9049 10524 . + . ID=gene-AC00_RS04630;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=AC00_RS04630;old_locus_tag=AC00_4286 NZ_JJLU01000125.1 Protein Homology CDS 9049 10524 . + 0 ID=cds-WP_000024951.1;Parent=gene-AC00_RS04630;Dbxref=GenBank:WP_000024951.1;Name=WP_000024951.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=AC00_RS04630;product=ketol-acid reductoisomerase;protein_id=WP_000024951.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 10570 10851 . - . ID=gene-AC00_RS04625;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=AC00_RS04625;old_locus_tag=AC00_4287 NZ_JJLU01000125.1 Protein Homology CDS 10570 10851 . - 0 ID=cds-WP_001140251.1;Parent=gene-AC00_RS04625;Dbxref=GenBank:WP_001140251.1;Name=WP_001140251.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=AC00_RS04625;product=peptidylprolyl isomerase PpiC;protein_id=WP_001140251.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 10938 12959 . + . ID=gene-AC00_RS04620;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=AC00_RS04620;old_locus_tag=AC00_4288 NZ_JJLU01000125.1 Protein Homology CDS 10938 12959 . + 0 ID=cds-WP_001238890.1;Parent=gene-AC00_RS04620;Dbxref=GenBank:WP_001238890.1;Name=WP_001238890.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026251.1;locus_tag=AC00_RS04620;product=DNA helicase Rep;protein_id=WP_001238890.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 13006 14490 . - . ID=gene-AC00_RS04615;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=AC00_RS04615;old_locus_tag=AC00_4289 NZ_JJLU01000125.1 Protein Homology CDS 13006 14490 . - 0 ID=cds-WP_032281904.1;Parent=gene-AC00_RS04615;Dbxref=GenBank:WP_032281904.1;Name=WP_032281904.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312739.1;locus_tag=AC00_RS04615;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_032281904.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 14626 15891 . - . ID=gene-AC00_RS04610;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=AC00_RS04610;old_locus_tag=AC00_4290 NZ_JJLU01000125.1 Protein Homology CDS 14626 15891 . - 0 ID=cds-WP_001553682.1;Parent=gene-AC00_RS04610;Dbxref=GenBank:WP_001553682.1;Name=WP_001553682.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=AC00_RS04610;product=ATP-dependent RNA helicase RhlB;protein_id=WP_001553682.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 16022 16351 . + . ID=gene-AC00_RS04605;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AC00_RS04605;old_locus_tag=AC00_4291 NZ_JJLU01000125.1 Protein Homology CDS 16022 16351 . + 0 ID=cds-WP_001280776.1;Parent=gene-AC00_RS04605;Dbxref=GenBank:WP_001280776.1;Name=WP_001280776.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=AC00_RS04605;product=thioredoxin TrxA;protein_id=WP_001280776.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 16492 16593 . + . ID=gene-AC00_RS0125780;Name=rhoL;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=AC00_RS0125780 NZ_JJLU01000125.1 Protein Homology CDS 16492 16593 . + 0 ID=cds-WP_001295255.1;Parent=gene-AC00_RS0125780;Dbxref=GenBank:WP_001295255.1;Name=WP_001295255.1;gbkey=CDS;gene=rhoL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312742.1;locus_tag=AC00_RS0125780;product=rho operon leader peptide RhoL;protein_id=WP_001295255.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 16678 17937 . + . ID=gene-AC00_RS04600;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AC00_RS04600;old_locus_tag=AC00_4292 NZ_JJLU01000125.1 Protein Homology CDS 16678 17937 . + 0 ID=cds-WP_001054527.1;Parent=gene-AC00_RS04600;Dbxref=GenBank:WP_001054527.1;Name=WP_001054527.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=AC00_RS04600;product=transcription termination factor Rho;protein_id=WP_001054527.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 18177 19280 . + . ID=gene-AC00_RS04590;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=AC00_RS04590;old_locus_tag=AC00_4294 NZ_JJLU01000125.1 Protein Homology CDS 18177 19280 . + 0 ID=cds-WP_032281906.1;Parent=gene-AC00_RS04590;Dbxref=GenBank:WP_032281906.1;Name=WP_032281906.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418231.1;locus_tag=AC00_RS04590;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_032281906.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 19292 20338 . + . ID=gene-AC00_RS04585;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=AC00_RS04585;old_locus_tag=AC00_4295 NZ_JJLU01000125.1 Protein Homology CDS 19292 20338 . + 0 ID=cds-WP_001456763.1;Parent=gene-AC00_RS04585;Dbxref=GenBank:WP_001456763.1;Name=WP_001456763.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709589.2;locus_tag=AC00_RS04585;product=ECA polysaccharide chain length modulation protein;protein_id=WP_001456763.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 20394 21524 . + . ID=gene-AC00_RS04580;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=AC00_RS04580;old_locus_tag=AC00_4296 NZ_JJLU01000125.1 Protein Homology CDS 20394 21524 . + 0 ID=cds-WP_000866672.1;Parent=gene-AC00_RS04580;Dbxref=GenBank:WP_000866672.1;Name=WP_000866672.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312746.2;locus_tag=AC00_RS04580;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_000866672.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 21521 22783 . + . ID=gene-AC00_RS04575;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=AC00_RS04575;old_locus_tag=AC00_4297 NZ_JJLU01000125.1 Protein Homology CDS 21521 22783 . + 0 ID=cds-WP_000006621.1;Parent=gene-AC00_RS04575;Dbxref=GenBank:WP_000006621.1;Name=WP_000006621.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=AC00_RS04575;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_000006621.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 22783 23850 . + . ID=gene-AC00_RS04570;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=AC00_RS04570;old_locus_tag=AC00_4298 NZ_JJLU01000125.1 Protein Homology CDS 22783 23850 . + 0 ID=cds-WP_001226600.1;Parent=gene-AC00_RS04570;Dbxref=GenBank:WP_001226600.1;Name=WP_001226600.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026255.1;locus_tag=AC00_RS04570;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_001226600.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 23869 24750 . + . ID=gene-AC00_RS04565;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AC00_RS04565;old_locus_tag=AC00_4299 NZ_JJLU01000125.1 Protein Homology CDS 23869 24750 . + 0 ID=cds-WP_000676056.1;Parent=gene-AC00_RS04565;Dbxref=GenBank:WP_000676056.1;Name=WP_000676056.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133346.1;locus_tag=AC00_RS04565;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_000676056.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 24728 25402 . + . ID=gene-AC00_RS04560;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=AC00_RS04560;old_locus_tag=AC00_4300 NZ_JJLU01000125.1 Protein Homology CDS 24728 25402 . + 0 ID=cds-WP_001145183.1;Parent=gene-AC00_RS04560;Dbxref=GenBank:WP_001145183.1;Name=WP_001145183.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026256.2;locus_tag=AC00_RS04560;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_001145183.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 25407 26537 . + . ID=gene-AC00_RS04555;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=AC00_RS04555;old_locus_tag=AC00_4301 NZ_JJLU01000125.1 Protein Homology CDS 25407 26537 . + 0 ID=cds-WP_000612071.1;Parent=gene-AC00_RS04555;Dbxref=GenBank:WP_000612071.1;Name=WP_000612071.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418238.1;locus_tag=AC00_RS04555;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_000612071.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 26539 27789 . + . ID=gene-AC00_RS04550;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=AC00_RS04550;old_locus_tag=AC00_4302 NZ_JJLU01000125.1 Protein Homology CDS 26539 27789 . + 0 ID=cds-WP_000050265.1;Parent=gene-AC00_RS04550;Dbxref=GenBank:WP_000050265.1;Name=WP_000050265.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418239.1;locus_tag=AC00_RS04550;product=lipid III flippase WzxE;protein_id=WP_000050265.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 27786 28865 . + . ID=gene-AC00_RS04545;Name=rffT;gbkey=Gene;gene=rffT;gene_biotype=protein_coding;gene_synonym=wecF;locus_tag=AC00_RS04545;old_locus_tag=AC00_4303 NZ_JJLU01000125.1 Protein Homology CDS 27786 28865 . + 0 ID=cds-WP_032281907.1;Parent=gene-AC00_RS04545;Dbxref=GenBank:WP_032281907.1;Name=WP_032281907.1;gbkey=CDS;gene=rffT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312753.1;locus_tag=AC00_RS04545;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_032281907.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 28862 30214 . + . ID=gene-AC00_RS04540;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=AC00_RS04540;old_locus_tag=AC00_4304 NZ_JJLU01000125.1 Protein Homology CDS 28862 30214 . + 0 ID=cds-WP_000055132.1;Parent=gene-AC00_RS04540;Dbxref=GenBank:WP_000055132.1;Name=WP_000055132.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312754.1;locus_tag=AC00_RS04540;product=ECA oligosaccharide polymerase;protein_id=WP_000055132.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 30217 30957 . + . ID=gene-AC00_RS04535;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=AC00_RS04535;old_locus_tag=AC00_4305 NZ_JJLU01000125.1 Protein Homology CDS 30217 30957 . + 0 ID=cds-WP_001064038.1;Parent=gene-AC00_RS04535;Dbxref=GenBank:WP_001064038.1;Name=WP_001064038.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=AC00_RS04535;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_001064038.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 31148 32533 . + . ID=gene-AC00_RS04530;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=AC00_RS04530;old_locus_tag=AC00_4306 NZ_JJLU01000125.1 Protein Homology CDS 31148 32533 . + 0 ID=cds-WP_000774731.1;Parent=gene-AC00_RS04530;Dbxref=GenBank:WP_000774731.1;Name=WP_000774731.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=AC00_RS04530;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_000774731.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 32636 32712 . + . ID=gene-AC00_RS04525;Name=AC00_RS04525;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04525;old_locus_tag=AC00_4307 NZ_JJLU01000125.1 tRNAscan-SE tRNA 32636 32712 . + . ID=rna-AC00_RS04525;Parent=gene-AC00_RS04525;anticodon=(pos:32670..32672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04525;product=tRNA-Arg NZ_JJLU01000125.1 tRNAscan-SE exon 32636 32712 . + . ID=exon-AC00_RS04525-1;Parent=rna-AC00_RS04525;anticodon=(pos:32670..32672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04525;product=tRNA-Arg NZ_JJLU01000125.1 RefSeq gene 32771 32846 . + . ID=gene-AC00_RS04520;Name=AC00_RS04520;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04520;old_locus_tag=AC00_4308 NZ_JJLU01000125.1 tRNAscan-SE tRNA 32771 32846 . + . ID=rna-AC00_RS04520;Parent=gene-AC00_RS04520;anticodon=(pos:32804..32806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04520;product=tRNA-His NZ_JJLU01000125.1 tRNAscan-SE exon 32771 32846 . + . ID=exon-AC00_RS04520-1;Parent=rna-AC00_RS04520;anticodon=(pos:32804..32806);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04520;product=tRNA-His NZ_JJLU01000125.1 RefSeq gene 32867 32953 . + . ID=gene-AC00_RS04515;Name=AC00_RS04515;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04515;old_locus_tag=AC00_4309 NZ_JJLU01000125.1 tRNAscan-SE tRNA 32867 32953 . + . ID=rna-AC00_RS04515;Parent=gene-AC00_RS04515;anticodon=(pos:32901..32903);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04515;product=tRNA-Leu NZ_JJLU01000125.1 tRNAscan-SE exon 32867 32953 . + . ID=exon-AC00_RS04515-1;Parent=rna-AC00_RS04515;anticodon=(pos:32901..32903);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04515;product=tRNA-Leu NZ_JJLU01000125.1 RefSeq gene 32996 33072 . + . ID=gene-AC00_RS04510;Name=AC00_RS04510;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS04510;old_locus_tag=AC00_4310 NZ_JJLU01000125.1 tRNAscan-SE tRNA 32996 33072 . + . ID=rna-AC00_RS04510;Parent=gene-AC00_RS04510;anticodon=(pos:33030..33032);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04510;product=tRNA-Pro NZ_JJLU01000125.1 tRNAscan-SE exon 32996 33072 . + . ID=exon-AC00_RS04510-1;Parent=rna-AC00_RS04510;anticodon=(pos:33030..33032);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS04510;product=tRNA-Pro NZ_JJLU01000125.1 RefSeq pseudogene 33219 34454 . + . ID=gene-AC00_RS0125785;Name=aslB;gbkey=Gene;gene=aslB;gene_biotype=pseudogene;locus_tag=AC00_RS0125785;old_locus_tag=AC00_4312;pseudo=true NZ_JJLU01000125.1 Protein Homology CDS 33219 34454 . + 0 ID=cds-AC00_RS0125785;Parent=gene-AC00_RS0125785;Note=internal stop;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;gene=aslB;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312757.1;locus_tag=AC00_RS0125785;product=anaerobic sulfatase maturase;pseudo=true;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 34622 36277 . - . ID=gene-AC00_RS04505;Name=aslA;gbkey=Gene;gene=aslA;gene_biotype=protein_coding;locus_tag=AC00_RS04505;old_locus_tag=AC00_4313 NZ_JJLU01000125.1 Protein Homology CDS 34622 36277 . - 0 ID=cds-WP_032281909.1;Parent=gene-AC00_RS04505;Dbxref=GenBank:WP_032281909.1;Name=WP_032281909.1;gbkey=CDS;gene=aslA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312758.1;locus_tag=AC00_RS04505;product=arylsulfatase AslA;protein_id=WP_032281909.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 36956 38152 . - . ID=gene-AC00_RS04500;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=AC00_RS04500;old_locus_tag=AC00_4315 NZ_JJLU01000125.1 Protein Homology CDS 36956 38152 . - 0 ID=cds-WP_032288358.1;Parent=gene-AC00_RS04500;Dbxref=GenBank:WP_032288358.1;Name=WP_032288358.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312759.1;locus_tag=AC00_RS04500;product=protoheme IX biogenesis protein HemY;protein_id=WP_032288358.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 38155 39366 . - . ID=gene-AC00_RS04495;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=AC00_RS04495;old_locus_tag=AC00_4316 NZ_JJLU01000125.1 Protein Homology CDS 38155 39366 . - 0 ID=cds-WP_032281911.1;Parent=gene-AC00_RS04495;Dbxref=GenBank:WP_032281911.1;Name=WP_032281911.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312760.1;locus_tag=AC00_RS04495;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_032281911.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 39388 40128 . - . ID=gene-AC00_RS04490;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=AC00_RS04490;old_locus_tag=AC00_4317 NZ_JJLU01000125.1 Protein Homology CDS 39388 40128 . - 0 ID=cds-WP_000026051.1;Parent=gene-AC00_RS04490;Dbxref=GenBank:WP_000026051.1;Name=WP_000026051.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312761.1;locus_tag=AC00_RS04490;product=uroporphyrinogen-III synthase;protein_id=WP_000026051.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 40125 41066 . - . ID=gene-AC00_RS04485;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AC00_RS04485;old_locus_tag=AC00_4318 NZ_JJLU01000125.1 Protein Homology CDS 40125 41066 . - 0 ID=cds-WP_032281912.1;Parent=gene-AC00_RS04485;Dbxref=GenBank:WP_032281912.1;Name=WP_032281912.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=AC00_RS04485;product=hydroxymethylbilane synthase;protein_id=WP_032281912.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 41453 43999 . + . ID=gene-AC00_RS04480;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=AC00_RS04480;old_locus_tag=AC00_4319 NZ_JJLU01000125.1 Protein Homology CDS 41453 43999 . + 0 ID=cds-WP_000281680.1;Parent=gene-AC00_RS04480;Dbxref=GenBank:WP_000281680.1;Name=WP_000281680.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312763.1;locus_tag=AC00_RS04480;product=class I adenylate cyclase;protein_id=WP_000281680.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 44039 44359 . - . ID=gene-AC00_RS04475;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=AC00_RS04475;old_locus_tag=AC00_4320 NZ_JJLU01000125.1 Protein Homology CDS 44039 44359 . - 0 ID=cds-WP_032281913.1;Parent=gene-AC00_RS04475;Dbxref=GenBank:WP_032281913.1;Name=WP_032281913.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=AC00_RS04475;product=iron donor protein CyaY;protein_id=WP_032281913.1;transl_table=11 NZ_JJLU01000125.1 RefSeq pseudogene 44484 44662 . - . ID=gene-AC00_RS30965;Name=AC00_RS30965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30965;partial=true;pseudo=true;start_range=.,44484 NZ_JJLU01000125.1 Protein Homology CDS 44484 44662 . - 0 ID=cds-AC00_RS30965;Parent=gene-AC00_RS30965;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000580503.1;locus_tag=AC00_RS30965;partial=true;product=DKNYY family protein;pseudo=true;start_range=.,44484;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 44821 45024 . + . ID=gene-AC00_RS04470;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AC00_RS04470;old_locus_tag=AC00_4322 NZ_JJLU01000125.1 Protein Homology CDS 44821 45024 . + 0 ID=cds-WP_000799889.1;Parent=gene-AC00_RS04470;Dbxref=GenBank:WP_000799889.1;Name=WP_000799889.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709615.1;locus_tag=AC00_RS04470;product=LPS translocon maturation chaperone LptM;protein_id=WP_000799889.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 45061 45885 . + . ID=gene-AC00_RS04465;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AC00_RS04465;old_locus_tag=AC00_4323 NZ_JJLU01000125.1 Protein Homology CDS 45061 45885 . + 0 ID=cds-WP_001160654.1;Parent=gene-AC00_RS04465;Dbxref=GenBank:WP_001160654.1;Name=WP_001160654.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=AC00_RS04465;product=diaminopimelate epimerase;protein_id=WP_001160654.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 45882 46589 . + . ID=gene-AC00_RS04460;Name=yigA;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=AC00_RS04460;old_locus_tag=AC00_4324 NZ_JJLU01000125.1 Protein Homology CDS 45882 46589 . + 0 ID=cds-WP_000812796.1;Parent=gene-AC00_RS04460;Dbxref=GenBank:WP_000812796.1;Name=WP_000812796.1;gbkey=CDS;gene=yigA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418255.1;locus_tag=AC00_RS04460;product=DUF484 domain-containing protein;protein_id=WP_000812796.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 46586 47482 . + . ID=gene-AC00_RS04455;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AC00_RS04455;old_locus_tag=AC00_4325 NZ_JJLU01000125.1 Protein Homology CDS 46586 47482 . + 0 ID=cds-WP_032281914.1;Parent=gene-AC00_RS04455;Dbxref=GenBank:WP_032281914.1;Name=WP_032281914.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709618.1;locus_tag=AC00_RS04455;product=tyrosine recombinase XerC;protein_id=WP_032281914.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 47482 48198 . + . ID=gene-AC00_RS04450;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=AC00_RS04450;old_locus_tag=AC00_4326 NZ_JJLU01000125.1 Protein Homology CDS 47482 48198 . + 0 ID=cds-WP_001213584.1;Parent=gene-AC00_RS04450;Dbxref=GenBank:WP_001213584.1;Name=WP_001213584.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418257.1;locus_tag=AC00_RS04450;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_001213584.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 48282 50444 . + . ID=gene-AC00_RS04445;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=AC00_RS04445;old_locus_tag=AC00_4327 NZ_JJLU01000125.1 Protein Homology CDS 48282 50444 . + 0 ID=cds-WP_000383417.1;Parent=gene-AC00_RS04445;Dbxref=GenBank:WP_000383417.1;Name=WP_000383417.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312770.1;locus_tag=AC00_RS04445;product=DNA helicase II;protein_id=WP_000383417.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 50489 51391 . - . ID=gene-AC00_RS04440;Name=AC00_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04440;old_locus_tag=AC00_4328 NZ_JJLU01000125.1 Protein Homology CDS 50489 51391 . - 0 ID=cds-WP_032281915.1;Parent=gene-AC00_RS04440;Dbxref=GenBank:WP_032281915.1;Name=WP_032281915.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312771.1;locus_tag=AC00_RS04440;product=SAM hydrolase/SAM-dependent halogenase family protein;protein_id=WP_032281915.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 51474 52238 . - . ID=gene-AC00_RS04435;Name=yigE;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=AC00_RS04435;old_locus_tag=AC00_4329 NZ_JJLU01000125.1 Protein Homology CDS 51474 52238 . - 0 ID=cds-WP_032281916.1;Parent=gene-AC00_RS04435;Dbxref=GenBank:WP_032281916.1;Name=WP_032281916.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yigE;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312772.1;locus_tag=AC00_RS04435;product=phosphodiester glycosidase family protein;protein_id=WP_032281916.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 52400 52456 . + . ID=gene-AC00_RS31360;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=AC00_RS31360 NZ_JJLU01000125.1 Protein Homology CDS 52400 52456 . + 0 ID=cds-WP_211180520.1;Parent=gene-AC00_RS31360;Dbxref=GenBank:WP_211180520.1;Name=WP_211180520.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=AC00_RS31360;product=protein YsgD;protein_id=WP_211180520.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 52608 53558 . + . ID=gene-AC00_RS04425;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=AC00_RS04425;old_locus_tag=AC00_4331 NZ_JJLU01000125.1 Protein Homology CDS 52608 53558 . + 0 ID=cds-WP_000947159.1;Parent=gene-AC00_RS04425;Dbxref=GenBank:WP_000947159.1;Name=WP_000947159.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=AC00_RS04425;product=magnesium/cobalt transporter CorA;protein_id=WP_000947159.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 53601 53981 . - . ID=gene-AC00_RS04420;Name=yigF;gbkey=Gene;gene=yigF;gene_biotype=protein_coding;locus_tag=AC00_RS04420;old_locus_tag=AC00_4332 NZ_JJLU01000125.1 Protein Homology CDS 53601 53981 . - 0 ID=cds-WP_000032581.1;Parent=gene-AC00_RS04420;Dbxref=GenBank:WP_000032581.1;Name=WP_000032581.1;gbkey=CDS;gene=yigF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418261.1;locus_tag=AC00_RS04420;product=DUF2628 domain-containing protein;protein_id=WP_000032581.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 53995 54375 . - . ID=gene-AC00_RS0125790;Name=yigG;gbkey=Gene;gene=yigG;gene_biotype=protein_coding;locus_tag=AC00_RS0125790 NZ_JJLU01000125.1 Protein Homology CDS 53995 54375 . - 0 ID=cds-WP_024257910.1;Parent=gene-AC00_RS0125790;Dbxref=GenBank:WP_024257910.1;Name=WP_024257910.1;gbkey=CDS;gene=yigG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418262.2;locus_tag=AC00_RS0125790;product=protein YigG;protein_id=WP_024257910.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 54470 55360 . - . ID=gene-AC00_RS04415;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=AC00_RS04415;old_locus_tag=AC00_4334 NZ_JJLU01000125.1 Protein Homology CDS 54470 55360 . - 0 ID=cds-WP_032281917.1;Parent=gene-AC00_RS04415;Dbxref=GenBank:WP_032281917.1;Name=WP_032281917.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709625.1;locus_tag=AC00_RS04415;product=EamA family transporter RarD;protein_id=WP_032281917.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 55412 55879 . - . ID=gene-AC00_RS04410;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=AC00_RS04410;old_locus_tag=AC00_4335 NZ_JJLU01000125.1 Protein Homology CDS 55412 55879 . - 0 ID=cds-WP_001277142.1;Parent=gene-AC00_RS04410;Dbxref=GenBank:WP_001277142.1;Name=WP_001277142.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=AC00_RS04410;product=acyl-CoA thioesterase YigI;protein_id=WP_001277142.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 56044 56913 . + . ID=gene-AC00_RS04405;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=AC00_RS04405;old_locus_tag=AC00_4336 NZ_JJLU01000125.1 Protein Homology CDS 56044 56913 . + 0 ID=cds-WP_001259700.1;Parent=gene-AC00_RS04405;Dbxref=GenBank:WP_001259700.1;Name=WP_001259700.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312778.1;locus_tag=AC00_RS04405;product=phospholipase A;protein_id=WP_001259700.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 57046 58875 . + . ID=gene-AC00_RS04400;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=AC00_RS04400;old_locus_tag=AC00_4337 NZ_JJLU01000125.1 Protein Homology CDS 57046 58875 . + 0 ID=cds-WP_000035581.1;Parent=gene-AC00_RS04400;Dbxref=GenBank:WP_000035581.1;Name=WP_000035581.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=AC00_RS04400;product=ATP-dependent DNA helicase RecQ;protein_id=WP_000035581.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 58939 59559 . + . ID=gene-AC00_RS04395;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=AC00_RS04395;old_locus_tag=AC00_4338 NZ_JJLU01000125.1 Protein Homology CDS 58939 59559 . + 0 ID=cds-WP_000928824.1;Parent=gene-AC00_RS04395;Dbxref=GenBank:WP_000928824.1;Name=WP_000928824.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312780.1;locus_tag=AC00_RS04395;product=threonine export protein RhtC;protein_id=WP_000928824.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 59621 60241 . - . ID=gene-AC00_RS04390;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=AC00_RS04390;old_locus_tag=AC00_4339 NZ_JJLU01000125.1 Protein Homology CDS 59621 60241 . - 0 ID=cds-WP_000171710.1;Parent=gene-AC00_RS04390;Dbxref=GenBank:WP_000171710.1;Name=WP_000171710.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312781.1;locus_tag=AC00_RS04390;product=homoserine/homoserine lactone efflux protein;protein_id=WP_000171710.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 60352 61374 . + . ID=gene-AC00_RS04385;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=AC00_RS04385;old_locus_tag=AC00_4340 NZ_JJLU01000125.1 Protein Homology CDS 60352 61374 . + 0 ID=cds-WP_000487654.1;Parent=gene-AC00_RS04385;Dbxref=GenBank:WP_000487654.1;Name=WP_000487654.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026266.1;locus_tag=AC00_RS04385;product=lysophospholipase L2;protein_id=WP_000487654.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 61382 62182 . + . ID=gene-AC00_RS04380;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=AC00_RS04380;old_locus_tag=AC00_4341 NZ_JJLU01000125.1 Protein Homology CDS 61382 62182 . + 0 ID=cds-WP_032281918.1;Parent=gene-AC00_RS04380;Dbxref=GenBank:WP_032281918.1;Name=WP_032281918.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312783.1;locus_tag=AC00_RS04380;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_032281918.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 62258 63157 . + . ID=gene-AC00_RS0125795;Name=bioP;gbkey=Gene;gene=bioP;gene_biotype=protein_coding;locus_tag=AC00_RS0125795 NZ_JJLU01000125.1 Protein Homology CDS 62258 63157 . + 0 ID=cds-WP_021578150.1;Parent=gene-AC00_RS0125795;Dbxref=GenBank:WP_021578150.1;Name=WP_021578150.1;gbkey=CDS;gene=bioP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312784.1;locus_tag=AC00_RS0125795;product=biotin transporter;protein_id=WP_021578150.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 63045 63998 . - . ID=gene-AC00_RS04375;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=AC00_RS04375;old_locus_tag=AC00_4343 NZ_JJLU01000125.1 Protein Homology CDS 63045 63998 . - 0 ID=cds-WP_000573615.1;Parent=gene-AC00_RS04375;Dbxref=GenBank:WP_000573615.1;Name=WP_000573615.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312785.1;locus_tag=AC00_RS04375;product=HTH-type transcriptional regulator MetR;protein_id=WP_000573615.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 64234 66495 . + . ID=gene-AC00_RS04370;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=AC00_RS04370;old_locus_tag=AC00_4344 NZ_JJLU01000125.1 Protein Homology CDS 64234 66495 . + 0 ID=cds-WP_032281919.1;Parent=gene-AC00_RS04370;Dbxref=GenBank:WP_032281919.1;Name=WP_032281919.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418273.1;locus_tag=AC00_RS04370;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_032281919.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 66535 67350 . - . ID=gene-AC00_RS04365;Name=ysgA;gbkey=Gene;gene=ysgA;gene_biotype=protein_coding;locus_tag=AC00_RS04365;old_locus_tag=AC00_4345 NZ_JJLU01000125.1 Protein Homology CDS 66535 67350 . - 0 ID=cds-WP_012304928.1;Parent=gene-AC00_RS04365;Dbxref=GenBank:WP_012304928.1;Name=WP_012304928.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;gene=ysgA;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312787.2;locus_tag=AC00_RS04365;product=dienelactone hydrolase family protein;protein_id=WP_012304928.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 67612 68373 . + . ID=gene-AC00_RS04360;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=AC00_RS04360;old_locus_tag=AC00_4346 NZ_JJLU01000125.1 Protein Homology CDS 67612 68373 . + 0 ID=cds-WP_000045180.1;Parent=gene-AC00_RS04360;Dbxref=GenBank:WP_000045180.1;Name=WP_000045180.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312788.1;locus_tag=AC00_RS04360;product=uridine phosphorylase;protein_id=WP_000045180.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 68514 69941 . + . ID=gene-AC00_RS04355;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=AC00_RS04355;old_locus_tag=AC00_4347 NZ_JJLU01000125.1 Protein Homology CDS 68514 69941 . + 0 ID=cds-WP_001526525.1;Parent=gene-AC00_RS04355;Dbxref=GenBank:WP_001526525.1;Name=WP_001526525.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312789.1;locus_tag=AC00_RS04355;product=DNA recombination protein RmuC;protein_id=WP_001526525.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 70036 70791 . + . ID=gene-AC00_RS04350;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AC00_RS04350;old_locus_tag=AC00_4348 NZ_JJLU01000125.1 Protein Homology CDS 70036 70791 . + 0 ID=cds-WP_000227958.1;Parent=gene-AC00_RS04350;Dbxref=GenBank:WP_000227958.1;Name=WP_000227958.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=AC00_RS04350;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_000227958.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 70805 71410 . + . ID=gene-AC00_RS04345;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=AC00_RS04345;old_locus_tag=AC00_4349 NZ_JJLU01000125.1 Protein Homology CDS 70805 71410 . + 0 ID=cds-WP_032281920.1;Parent=gene-AC00_RS04345;Dbxref=GenBank:WP_032281920.1;Name=WP_032281920.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=AC00_RS04345;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_032281920.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 71407 73047 . + . ID=gene-AC00_RS04340;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AC00_RS04340;old_locus_tag=AC00_4350 NZ_JJLU01000125.1 Protein Homology CDS 71407 73047 . + 0 ID=cds-WP_032281921.1;Parent=gene-AC00_RS04340;Dbxref=GenBank:WP_032281921.1;Name=WP_032281921.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312792.1;locus_tag=AC00_RS04340;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_032281921.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 73126 73395 . + . ID=gene-AC00_RS04335;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AC00_RS04335;old_locus_tag=AC00_4351 NZ_JJLU01000125.1 Protein Homology CDS 73126 73395 . + 0 ID=cds-WP_001295260.1;Parent=gene-AC00_RS04335;Dbxref=GenBank:WP_001295260.1;Name=WP_001295260.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=AC00_RS04335;product=Sec-independent protein translocase subunit TatA;protein_id=WP_001295260.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 73399 73914 . + . ID=gene-AC00_RS04330;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=AC00_RS04330;old_locus_tag=AC00_4352 NZ_JJLU01000125.1 Protein Homology CDS 73399 73914 . + 0 ID=cds-WP_000459594.1;Parent=gene-AC00_RS04330;Dbxref=GenBank:WP_000459594.1;Name=WP_000459594.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312794.1;locus_tag=AC00_RS04330;product=Sec-independent protein translocase protein TatB;protein_id=WP_000459594.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 73917 74693 . + . ID=gene-AC00_RS04325;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=AC00_RS04325;old_locus_tag=AC00_4353 NZ_JJLU01000125.1 Protein Homology CDS 73917 74693 . + 0 ID=cds-WP_000109943.1;Parent=gene-AC00_RS04325;Dbxref=GenBank:WP_000109943.1;Name=WP_000109943.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312795.1;locus_tag=AC00_RS04325;product=Sec-independent protein translocase subunit TatC;protein_id=WP_000109943.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 74735 75517 . + . ID=gene-AC00_RS04320;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=AC00_RS04320;old_locus_tag=AC00_4354 NZ_JJLU01000125.1 Protein Homology CDS 74735 75517 . + 0 ID=cds-WP_021578153.1;Parent=gene-AC00_RS04320;Dbxref=GenBank:WP_021578153.1;Name=WP_021578153.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312796.1;locus_tag=AC00_RS04320;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_021578153.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 75514 76002 . - . ID=gene-AC00_RS04315;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=AC00_RS04315;old_locus_tag=AC00_4355 NZ_JJLU01000125.1 Protein Homology CDS 75514 76002 . - 0 ID=cds-WP_032281922.1;Parent=gene-AC00_RS04315;Dbxref=GenBank:WP_032281922.1;Name=WP_032281922.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312797.1;locus_tag=AC00_RS04315;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_032281922.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 76169 77662 . + . ID=gene-AC00_RS04310;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=AC00_RS04310;old_locus_tag=AC00_4356 NZ_JJLU01000125.1 Protein Homology CDS 76169 77662 . + 0 ID=cds-WP_000339804.1;Parent=gene-AC00_RS04310;Dbxref=GenBank:WP_000339804.1;Name=WP_000339804.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418285.1;locus_tag=AC00_RS04310;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_000339804.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 77708 78409 . + . ID=gene-AC00_RS04305;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=AC00_RS04305;old_locus_tag=AC00_4357 NZ_JJLU01000125.1 Protein Homology CDS 77708 78409 . + 0 ID=cds-WP_000209826.1;Parent=gene-AC00_RS04305;Dbxref=GenBank:WP_000209826.1;Name=WP_000209826.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312799.1;locus_tag=AC00_RS04305;product=NAD(P)H-flavin reductase;protein_id=WP_000209826.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 78601 79764 . - . ID=gene-AC00_RS04300;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=AC00_RS04300;old_locus_tag=AC00_4358 NZ_JJLU01000125.1 Protein Homology CDS 78601 79764 . - 0 ID=cds-WP_000438736.1;Parent=gene-AC00_RS04300;Dbxref=GenBank:WP_000438736.1;Name=WP_000438736.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312800.1;locus_tag=AC00_RS04300;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000438736.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 79774 81963 . - . ID=gene-AC00_RS04295;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=AC00_RS04295;old_locus_tag=AC00_4359 NZ_JJLU01000125.1 Protein Homology CDS 79774 81963 . - 0 ID=cds-WP_001612082.1;Parent=gene-AC00_RS04295;Dbxref=GenBank:WP_001612082.1;Name=WP_001612082.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709650.2;locus_tag=AC00_RS04295;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_001612082.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 82153 83484 . + . ID=gene-AC00_RS04290;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=AC00_RS04290;old_locus_tag=AC00_4360 NZ_JJLU01000125.1 Protein Homology CDS 82153 83484 . + 0 ID=cds-WP_000444561.1;Parent=gene-AC00_RS04290;Dbxref=GenBank:WP_000444561.1;Name=WP_000444561.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418289.1;locus_tag=AC00_RS04290;product=Xaa-Pro dipeptidase;protein_id=WP_000444561.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 83484 84098 . + . ID=gene-AC00_RS04285;Name=yigZ;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=AC00_RS04285;old_locus_tag=AC00_4361 NZ_JJLU01000125.1 Protein Homology CDS 83484 84098 . + 0 ID=cds-WP_001295262.1;Parent=gene-AC00_RS04285;Dbxref=GenBank:WP_001295262.1;Name=WP_001295262.1;gbkey=CDS;gene=yigZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312803.2;locus_tag=AC00_RS04285;product=IMPACT family protein;protein_id=WP_001295262.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 84137 85588 . + . ID=gene-AC00_RS04280;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=AC00_RS04280;old_locus_tag=AC00_4362 NZ_JJLU01000125.1 Protein Homology CDS 84137 85588 . + 0 ID=cds-WP_000545677.1;Parent=gene-AC00_RS04280;Dbxref=GenBank:WP_000545677.1;Name=WP_000545677.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=AC00_RS04280;product=Trk system potassium transporter TrkH;protein_id=WP_000545677.1;transl_table=11 NZ_JJLU01000125.1 RefSeq gene 85600 86145 . + . ID=gene-AC00_RS04275;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=AC00_RS04275;old_locus_tag=AC00_4363 NZ_JJLU01000125.1 Protein Homology CDS 85600 86145 . + 0 ID=cds-WP_000853959.1;Parent=gene-AC00_RS04275;Dbxref=GenBank:WP_000853959.1;Name=WP_000853959.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312805.1;locus_tag=AC00_RS04275;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_000853959.1;transl_table=11 ##sequence-region NZ_JJLU01000126.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000126.1 RefSeq region 1 317 . + . ID=NZ_JJLU01000126.1:1..317;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 ##sequence-region NZ_JJLU01000127.1 1 23009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000127.1 RefSeq region 1 23009 . + . ID=NZ_JJLU01000127.1:1..23009;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000127.1 RefSeq gene 68 2970 . + . ID=gene-AC00_RS04270;Name=AC00_RS04270;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS04270;old_locus_tag=AC00_4364 NZ_JJLU01000127.1 cmsearch rRNA 68 2970 . + . ID=rna-AC00_RS04270;Parent=gene-AC00_RS04270;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS04270;product=23S ribosomal RNA NZ_JJLU01000127.1 cmsearch exon 68 2970 . + . ID=exon-AC00_RS04270-1;Parent=rna-AC00_RS04270;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS04270;product=23S ribosomal RNA NZ_JJLU01000127.1 RefSeq gene 3065 3180 . + . ID=gene-AC00_RS04265;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS04265;old_locus_tag=AC00_4366 NZ_JJLU01000127.1 cmsearch rRNA 3065 3180 . + . ID=rna-AC00_RS04265;Parent=gene-AC00_RS04265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS04265;product=5S ribosomal RNA NZ_JJLU01000127.1 cmsearch exon 3065 3180 . + . ID=exon-AC00_RS04265-1;Parent=rna-AC00_RS04265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS04265;product=5S ribosomal RNA NZ_JJLU01000127.1 RefSeq gene 3284 3811 . - . ID=gene-AC00_RS04260;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=AC00_RS04260;old_locus_tag=AC00_4367 NZ_JJLU01000127.1 Protein Homology CDS 3284 3811 . - 0 ID=cds-WP_000907622.1;Parent=gene-AC00_RS04260;Dbxref=GenBank:WP_000907622.1;Name=WP_000907622.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418293.2;locus_tag=AC00_RS04260;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_000907622.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 3793 4377 . - . ID=gene-AC00_RS04255;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=AC00_RS04255;old_locus_tag=AC00_4368 NZ_JJLU01000127.1 Protein Homology CDS 3793 4377 . - 0 ID=cds-WP_032281453.1;Parent=gene-AC00_RS04255;Dbxref=GenBank:WP_032281453.1;Name=WP_032281453.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312807.1;locus_tag=AC00_RS04255;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_032281453.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 4447 4716 . + . ID=gene-AC00_RS04250;Name=AC00_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04250;old_locus_tag=AC00_4369 NZ_JJLU01000127.1 Protein Homology CDS 4447 4716 . + 0 ID=cds-WP_001295263.1;Parent=gene-AC00_RS04250;Dbxref=GenBank:WP_001295263.1;Name=WP_001295263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=AC00_RS04250;product=YihD family protein;protein_id=WP_001295263.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 4793 5779 . + . ID=gene-AC00_RS04245;Name=srkA;gbkey=Gene;gene=srkA;gene_biotype=protein_coding;locus_tag=AC00_RS04245;old_locus_tag=AC00_4370 NZ_JJLU01000127.1 Protein Homology CDS 4793 5779 . + 0 ID=cds-WP_001065516.1;Parent=gene-AC00_RS04245;Dbxref=GenBank:WP_001065516.1;Name=WP_001065516.1;gbkey=CDS;gene=srkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312809.1;locus_tag=AC00_RS04245;product=stress response kinase SrkA;protein_id=WP_001065516.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 5796 6422 . + . ID=gene-AC00_RS04240;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=AC00_RS04240;old_locus_tag=AC00_4371 NZ_JJLU01000127.1 Protein Homology CDS 5796 6422 . + 0 ID=cds-WP_000725337.1;Parent=gene-AC00_RS04240;Dbxref=GenBank:WP_000725337.1;Name=WP_000725337.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312810.1;locus_tag=AC00_RS04240;product=thiol:disulfide interchange protein DsbA;protein_id=WP_000725337.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 6577 8007 . + . ID=gene-AC00_RS04235;Name=AC00_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04235;old_locus_tag=AC00_4373 NZ_JJLU01000127.1 Protein Homology CDS 6577 8007 . + 0 ID=cds-WP_021578157.1;Parent=gene-AC00_RS04235;Dbxref=GenBank:WP_021578157.1;Name=WP_021578157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312811.2;locus_tag=AC00_RS04235;product=YdgA family protein;protein_id=WP_021578157.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 8048 8980 . - . ID=gene-AC00_RS04230;Name=AC00_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04230;old_locus_tag=AC00_4374 NZ_JJLU01000127.1 Protein Homology CDS 8048 8980 . - 0 ID=cds-WP_001303740.1;Parent=gene-AC00_RS04230;Dbxref=GenBank:WP_001303740.1;Name=WP_001303740.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312812.1;locus_tag=AC00_RS04230;product=acyltransferase;protein_id=WP_001303740.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 9344 12130 . + . ID=gene-AC00_RS04225;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AC00_RS04225;old_locus_tag=AC00_4376 NZ_JJLU01000127.1 Protein Homology CDS 9344 12130 . + 0 ID=cds-WP_000250006.1;Parent=gene-AC00_RS04225;Dbxref=GenBank:WP_000250006.1;Name=WP_000250006.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=AC00_RS04225;product=DNA polymerase I;protein_id=WP_000250006.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 12512 13144 . - . ID=gene-AC00_RS04220;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AC00_RS04220;old_locus_tag=AC00_4378 NZ_JJLU01000127.1 Protein Homology CDS 12512 13144 . - 0 ID=cds-WP_001600772.1;Parent=gene-AC00_RS04220;Dbxref=GenBank:WP_001600772.1;Name=WP_001600772.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418301.3;locus_tag=AC00_RS04220;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_001600772.1;transl_table=11 NZ_JJLU01000127.1 RefSeq pseudogene 13441 13607 . + . ID=gene-AC00_RS31365;Name=AC00_RS31365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31365;pseudo=true NZ_JJLU01000127.1 Protein Homology CDS 13441 13607 . + 0 ID=cds-AC00_RS31365;Parent=gene-AC00_RS31365;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546704.1;locus_tag=AC00_RS31365;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 13726 14232 . + . ID=gene-AC00_RS04215;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=AC00_RS04215;old_locus_tag=AC00_4379 NZ_JJLU01000127.1 Protein Homology CDS 13726 14232 . + 0 ID=cds-WP_001300530.1;Parent=gene-AC00_RS04215;Dbxref=GenBank:WP_001300530.1;Name=WP_001300530.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312815.1;locus_tag=AC00_RS04215;product=Der GTPase-activating protein YihI;protein_id=WP_001300530.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 14421 15794 . + . ID=gene-AC00_RS04210;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=AC00_RS04210;old_locus_tag=AC00_4381 NZ_JJLU01000127.1 Protein Homology CDS 14421 15794 . + 0 ID=cds-WP_032281924.1;Parent=gene-AC00_RS04210;Dbxref=GenBank:WP_032281924.1;Name=WP_032281924.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312816.2;locus_tag=AC00_RS04210;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_032281924.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 15984 16094 . - . ID=gene-AC00_RS0125805;Name=AC00_RS0125805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125805 NZ_JJLU01000127.1 Protein Homology CDS 15984 16094 . - 0 ID=cds-WP_000893994.1;Parent=gene-AC00_RS0125805;Dbxref=GenBank:WP_000893994.1;Name=WP_000893994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=AC00_RS0125805;product=YshB family small membrane protein;protein_id=WP_000893994.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 16206 17615 . - . ID=gene-AC00_RS04205;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=AC00_RS04205;old_locus_tag=AC00_4383 NZ_JJLU01000127.1 Protein Homology CDS 16206 17615 . - 0 ID=cds-WP_001188777.1;Parent=gene-AC00_RS04205;Dbxref=GenBank:WP_001188777.1;Name=WP_001188777.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=AC00_RS04205;product=nitrogen regulation protein NR(I);protein_id=WP_001188777.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 17627 18676 . - . ID=gene-AC00_RS04200;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=AC00_RS04200;old_locus_tag=AC00_4384 NZ_JJLU01000127.1 Protein Homology CDS 17627 18676 . - 0 ID=cds-WP_000190577.1;Parent=gene-AC00_RS04200;Dbxref=GenBank:WP_000190577.1;Name=WP_000190577.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312818.1;locus_tag=AC00_RS04200;product=nitrogen regulation protein NR(II);protein_id=WP_000190577.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 18850 20259 . - . ID=gene-AC00_RS04195;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AC00_RS04195;old_locus_tag=AC00_4385 NZ_JJLU01000127.1 Protein Homology CDS 18850 20259 . - 0 ID=cds-WP_001271717.1;Parent=gene-AC00_RS04195;Dbxref=GenBank:WP_001271717.1;Name=WP_001271717.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=AC00_RS04195;product=glutamate--ammonia ligase;protein_id=WP_001271717.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 20632 22455 . + . ID=gene-AC00_RS04190;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=AC00_RS04190;old_locus_tag=AC00_4386 NZ_JJLU01000127.1 Protein Homology CDS 20632 22455 . + 0 ID=cds-WP_000570668.1;Parent=gene-AC00_RS04190;Dbxref=GenBank:WP_000570668.1;Name=WP_000570668.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312820.1;locus_tag=AC00_RS04190;product=ribosome-dependent GTPase TypA;protein_id=WP_000570668.1;transl_table=11 NZ_JJLU01000127.1 RefSeq gene 22760 23009 . + . ID=gene-AC00_RS28500;Name=AC00_RS28500;end_range=23009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28500;partial=true NZ_JJLU01000127.1 Protein Homology CDS 22760 23009 . + 0 ID=cds-WP_001395527.1;Parent=gene-AC00_RS28500;Dbxref=GenBank:WP_001395527.1;Name=WP_001395527.1;end_range=23009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28500;partial=true;product=IS1-like element transposase;protein_id=WP_001395527.1;transl_table=11 ##sequence-region NZ_JJLU01000128.1 1 17275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000128.1 RefSeq region 1 17275 . + . ID=NZ_JJLU01000128.1:1..17275;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000128.1 RefSeq gene 1 280 . + . ID=gene-AC00_RS04180;Name=AC00_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04180;old_locus_tag=AC00_4388;partial=true;start_range=.,1 NZ_JJLU01000128.1 Protein Homology CDS 1 280 . + 1 ID=cds-WP_000431025.1-4;Parent=gene-AC00_RS04180;Dbxref=GenBank:WP_000431025.1;Name=WP_000431025.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS04180;partial=true;product=IS1 family transposase;protein_id=WP_000431025.1;start_range=.,1;transl_table=11 NZ_JJLU01000128.1 RefSeq pseudogene 297 1283 . + . ID=gene-AC00_RS04175;Name=AC00_RS04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS04175;old_locus_tag=AC00_4389;partial=true;pseudo=true;start_range=.,297 NZ_JJLU01000128.1 Protein Homology CDS 297 1283 . + 0 ID=cds-AC00_RS04175;Parent=gene-AC00_RS04175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312823.1;locus_tag=AC00_RS04175;partial=true;product=MFS transporter;pseudo=true;start_range=.,297;transl_table=11 NZ_JJLU01000128.1 RefSeq pseudogene 1358 1480 . - . ID=gene-AC00_RS31645;Name=AC00_RS31645;end_range=1480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31645;partial=true;pseudo=true NZ_JJLU01000128.1 Protein Homology CDS 1358 1480 . - 0 ID=cds-AC00_RS31645;Parent=gene-AC00_RS31645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022208.1;locus_tag=AC00_RS31645;partial=true;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11 NZ_JJLU01000128.1 RefSeq pseudogene 1468 1746 . - . ID=gene-AC00_RS0125815;Name=AC00_RS0125815;end_range=1746,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0125815;old_locus_tag=AC00_4390;partial=true;pseudo=true;start_range=.,1468 NZ_JJLU01000128.1 Protein Homology CDS 1468 1746 . - 0 ID=cds-AC00_RS0125815;Parent=gene-AC00_RS0125815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1746,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196715.1;locus_tag=AC00_RS0125815;partial=true;product=PfkB family carbohydrate kinase;pseudo=true;start_range=.,1468;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 1933 2532 . + . ID=gene-AC00_RS04170;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=AC00_RS04170;old_locus_tag=AC00_4392 NZ_JJLU01000128.1 Protein Homology CDS 1933 2532 . + 0 ID=cds-WP_032281925.1;Parent=gene-AC00_RS04170;Dbxref=GenBank:WP_032281925.1;Name=WP_032281925.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312835.2;locus_tag=AC00_RS04170;product=glucose-1-phosphatase;protein_id=WP_032281925.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 2526 3398 . + . ID=gene-AC00_RS04165;Name=yihY;gbkey=Gene;gene=yihY;gene_biotype=protein_coding;locus_tag=AC00_RS04165;old_locus_tag=AC00_4393 NZ_JJLU01000128.1 Protein Homology CDS 2526 3398 . + 0 ID=cds-WP_000920762.1;Parent=gene-AC00_RS04165;Dbxref=GenBank:WP_000920762.1;Name=WP_000920762.1;gbkey=CDS;gene=yihY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312836.1;locus_tag=AC00_RS04165;product=virulence factor BrkB family protein;protein_id=WP_000920762.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 3395 3832 . + . ID=gene-AC00_RS04160;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=AC00_RS04160;old_locus_tag=AC00_4394 NZ_JJLU01000128.1 Protein Homology CDS 3395 3832 . + 0 ID=cds-WP_032281927.1;Parent=gene-AC00_RS04160;Dbxref=GenBank:WP_032281927.1;Name=WP_032281927.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=AC00_RS04160;product=D-aminoacyl-tRNA deacylase;protein_id=WP_032281927.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 3877 4818 . + . ID=gene-AC00_RS04155;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=AC00_RS04155;old_locus_tag=AC00_4395 NZ_JJLU01000128.1 Protein Homology CDS 3877 4818 . + 0 ID=cds-WP_001343389.1;Parent=gene-AC00_RS04155;Dbxref=GenBank:WP_001343389.1;Name=WP_001343389.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=AC00_RS04155;product=fatty acid biosynthesis protein FabY;protein_id=WP_001343389.1;transl_table=11 NZ_JJLU01000128.1 RefSeq pseudogene 5228 6115 . + . ID=gene-AC00_RS31370;Name=AC00_RS31370;end_range=6115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31370;partial=true;pseudo=true NZ_JJLU01000128.1 Protein Homology CDS 5228 6115 . + 0 ID=cds-AC00_RS31370;Parent=gene-AC00_RS31370;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312839.1;locus_tag=AC00_RS31370;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 6128 7042 . + . ID=gene-AC00_RS31375;Name=AC00_RS31375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31375 NZ_JJLU01000128.1 Protein Homology CDS 6128 7042 . + 0 ID=cds-WP_077790038.1;Parent=gene-AC00_RS31375;Dbxref=GenBank:WP_077790038.1;Name=WP_077790038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312840.1;locus_tag=AC00_RS31375;product=transposase;protein_id=WP_077790038.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 7717 7935 . + . ID=gene-AC00_RS04145;Name=yiiE;gbkey=Gene;gene=yiiE;gene_biotype=protein_coding;locus_tag=AC00_RS04145;old_locus_tag=AC00_4397 NZ_JJLU01000128.1 Protein Homology CDS 7717 7935 . + 0 ID=cds-WP_032281929.1;Parent=gene-AC00_RS04145;Dbxref=GenBank:WP_032281929.1;Name=WP_032281929.1;Ontology_term=GO:0006276,GO:0006355,GO:0032993;gbkey=CDS;gene=yiiE;go_component=protein-DNA complex|0032993||IEA;go_process=plasmid maintenance|0006276||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312842.3;locus_tag=AC00_RS04145;product=CopG family transcriptional regulator;protein_id=WP_032281929.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 8153 8395 . + . ID=gene-AC00_RS04140;Name=yiiF;gbkey=Gene;gene=yiiF;gene_biotype=protein_coding;locus_tag=AC00_RS04140;old_locus_tag=AC00_4398 NZ_JJLU01000128.1 Protein Homology CDS 8153 8395 . + 0 ID=cds-WP_032281930.1;Parent=gene-AC00_RS04140;Dbxref=GenBank:WP_032281930.1;Name=WP_032281930.1;gbkey=CDS;gene=yiiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312843.3;locus_tag=AC00_RS04140;product=protein YiiF;protein_id=WP_032281930.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 8725 9654 . - . ID=gene-AC00_RS04135;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=AC00_RS04135;old_locus_tag=AC00_4399 NZ_JJLU01000128.1 Protein Homology CDS 8725 9654 . - 0 ID=cds-WP_000027708.1;Parent=gene-AC00_RS04135;Dbxref=GenBank:WP_000027708.1;Name=WP_000027708.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=AC00_RS04135;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_000027708.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 9651 10286 . - . ID=gene-AC00_RS04130;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=AC00_RS04130;old_locus_tag=AC00_4400 NZ_JJLU01000128.1 Protein Homology CDS 9651 10286 . - 0 ID=cds-WP_000829013.1;Parent=gene-AC00_RS04130;Dbxref=GenBank:WP_000829013.1;Name=WP_000829013.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312845.1;locus_tag=AC00_RS04130;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_000829013.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 10283 11185 . - . ID=gene-AC00_RS04125;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=AC00_RS04125;old_locus_tag=AC00_4401 NZ_JJLU01000128.1 Protein Homology CDS 10283 11185 . - 0 ID=cds-WP_000331377.1;Parent=gene-AC00_RS04125;Dbxref=GenBank:WP_000331377.1;Name=WP_000331377.1;gbkey=CDS;gene=fdoH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418329.1;locus_tag=AC00_RS04125;product=formate dehydrogenase O subunit beta;protein_id=WP_000331377.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 11198 14248 . - . ID=gene-AC00_RS04120;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=AC00_RS04120;old_locus_tag=AC00_4402 NZ_JJLU01000128.1 Protein Homology CDS 11198 14248 . - 0 ID=cds-WP_011310337.1;Parent=gene-AC00_RS04120;Dbxref=GenBank:WP_011310337.1;Name=WP_011310337.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418330.1;locus_tag=AC00_RS04120;product=formate dehydrogenase-N subunit alpha;protein_id=WP_011310337.1;transl_except=(pos:complement(13661..13663)%2Caa:Sec);transl_table=11 NZ_JJLU01000128.1 RefSeq gene 14442 15275 . + . ID=gene-AC00_RS04110;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=AC00_RS04110;old_locus_tag=AC00_4405 NZ_JJLU01000128.1 Protein Homology CDS 14442 15275 . + 0 ID=cds-WP_000753589.1;Parent=gene-AC00_RS04110;Dbxref=GenBank:WP_000753589.1;Name=WP_000753589.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312848.1;locus_tag=AC00_RS04110;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_000753589.1;transl_table=11 NZ_JJLU01000128.1 RefSeq gene 15428 16483 . + . ID=gene-AC00_RS04105;Name=yiiG;gbkey=Gene;gene=yiiG;gene_biotype=protein_coding;locus_tag=AC00_RS04105;old_locus_tag=AC00_4406 NZ_JJLU01000128.1 Protein Homology CDS 15428 16483 . + 0 ID=cds-WP_032281931.1;Parent=gene-AC00_RS04105;Dbxref=GenBank:WP_032281931.1;Name=WP_032281931.1;gbkey=CDS;gene=yiiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312849.1;locus_tag=AC00_RS04105;product=YiiG family protein;protein_id=WP_032281931.1;transl_table=11 NZ_JJLU01000128.1 RefSeq pseudogene 16533 16970 . - . ID=gene-AC00_RS30590;Name=AC00_RS30590;end_range=16970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30590;partial=true;pseudo=true NZ_JJLU01000128.1 Protein Homology CDS 16533 16970 . - 0 ID=cds-AC00_RS30590;Parent=gene-AC00_RS30590;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=16970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312850.1;locus_tag=AC00_RS30590;partial=true;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 NZ_JJLU01000128.1 RefSeq pseudogene 16986 17275 . - . ID=gene-AC00_RS30595;Name=AC00_RS30595;end_range=17275,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30595;old_locus_tag=AC00_4408;partial=true;pseudo=true NZ_JJLU01000128.1 Protein Homology CDS 16986 17275 . - 2 ID=cds-AC00_RS30595;Parent=gene-AC00_RS30595;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=17275,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS30595;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000129.1 1 95138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000129.1 RefSeq region 1 95138 . + . ID=NZ_JJLU01000129.1:1..95138;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000129.1 RefSeq gene 1 199 . + . ID=gene-AC00_RS04095;Name=AC00_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04095;old_locus_tag=AC00_4409;partial=true;start_range=.,1 NZ_JJLU01000129.1 Protein Homology CDS 1 199 . + 1 ID=cds-WP_000327172.1;Parent=gene-AC00_RS04095;Dbxref=GenBank:WP_000327172.1;Name=WP_000327172.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS04095;partial=true;product=IS1 family transposase;protein_id=WP_000327172.1;start_range=.,1;transl_table=11 NZ_JJLU01000129.1 RefSeq pseudogene 206 316 . + . ID=gene-AC00_RS30600;Name=AC00_RS30600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30600;partial=true;pseudo=true;start_range=.,206 NZ_JJLU01000129.1 Protein Homology CDS 206 316 . + 0 ID=cds-AC00_RS30600;Parent=gene-AC00_RS30600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312854.1;locus_tag=AC00_RS30600;partial=true;product=hypothetical protein;pseudo=true;start_range=.,206;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 357 671 . - . ID=gene-AC00_RS04090;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=AC00_RS04090;old_locus_tag=AC00_4410 NZ_JJLU01000129.1 Protein Homology CDS 357 671 . - 0 ID=cds-WP_000619496.1;Parent=gene-AC00_RS04090;Dbxref=GenBank:WP_000619496.1;Name=WP_000619496.1;Ontology_term=GO:0019299,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312855.1;locus_tag=AC00_RS04090;product=L-rhamnose mutarotase;protein_id=WP_000619496.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 681 1505 . - . ID=gene-AC00_RS04085;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=AC00_RS04085;old_locus_tag=AC00_4411 NZ_JJLU01000129.1 Protein Homology CDS 681 1505 . - 0 ID=cds-WP_032281935.1;Parent=gene-AC00_RS04085;Dbxref=GenBank:WP_032281935.1;Name=WP_032281935.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312856.1;locus_tag=AC00_RS04085;product=rhamnulose-1-phosphate aldolase;protein_id=WP_032281935.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 1953 3212 . - . ID=gene-AC00_RS04080;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=AC00_RS04080;old_locus_tag=AC00_4412 NZ_JJLU01000129.1 Protein Homology CDS 1953 3212 . - 0 ID=cds-WP_021578168.1;Parent=gene-AC00_RS04080;Dbxref=GenBank:WP_021578168.1;Name=WP_021578168.1;Ontology_term=GO:0019299,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=rhamnose metabolic process|0019299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026276.1;locus_tag=AC00_RS04080;product=L-rhamnose isomerase;protein_id=WP_021578168.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 3209 4678 . - . ID=gene-AC00_RS04075;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=AC00_RS04075;old_locus_tag=AC00_4413 NZ_JJLU01000129.1 Protein Homology CDS 3209 4678 . - 0 ID=cds-WP_032281936.1;Parent=gene-AC00_RS04075;Dbxref=GenBank:WP_032281936.1;Name=WP_032281936.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709708.1;locus_tag=AC00_RS04075;product=rhamnulokinase;protein_id=WP_032281936.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 4966 5802 . + . ID=gene-AC00_RS04065;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=AC00_RS04065;old_locus_tag=AC00_4416 NZ_JJLU01000129.1 Protein Homology CDS 4966 5802 . + 0 ID=cds-WP_000217135.1;Parent=gene-AC00_RS04065;Dbxref=GenBank:WP_000217135.1;Name=WP_000217135.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312859.1;locus_tag=AC00_RS04065;product=HTH-type transcriptional activator RhaS;protein_id=WP_000217135.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 5876 6724 . + . ID=gene-AC00_RS04060;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=AC00_RS04060;old_locus_tag=AC00_4417 NZ_JJLU01000129.1 Protein Homology CDS 5876 6724 . + 0 ID=cds-WP_001302243.1;Parent=gene-AC00_RS04060;Dbxref=GenBank:WP_001302243.1;Name=WP_001302243.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418342.2;locus_tag=AC00_RS04060;product=HTH-type transcriptional activator RhaR;protein_id=WP_001302243.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 6721 7755 . - . ID=gene-AC00_RS04055;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=AC00_RS04055;old_locus_tag=AC00_4418 NZ_JJLU01000129.1 Protein Homology CDS 6721 7755 . - 0 ID=cds-WP_032281937.1;Parent=gene-AC00_RS04055;Dbxref=GenBank:WP_032281937.1;Name=WP_032281937.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418343.1;locus_tag=AC00_RS04055;product=L-rhamnose/proton symporter RhaT;protein_id=WP_032281937.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 8040 8660 . + . ID=gene-AC00_RS04050;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=AC00_RS04050;old_locus_tag=AC00_4419 NZ_JJLU01000129.1 Protein Homology CDS 8040 8660 . + 0 ID=cds-WP_001297064.1;Parent=gene-AC00_RS04050;Dbxref=GenBank:WP_001297064.1;Name=WP_001297064.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=AC00_RS04050;product=superoxide dismutase [Mn];protein_id=WP_001297064.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 8920 9903 . + . ID=gene-AC00_RS04040;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=AC00_RS04040;old_locus_tag=AC00_4421 NZ_JJLU01000129.1 Protein Homology CDS 8920 9903 . + 0 ID=cds-WP_001166063.1;Parent=gene-AC00_RS04040;Dbxref=GenBank:WP_001166063.1;Name=WP_001166063.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709713.2;locus_tag=AC00_RS04040;product=2-keto-3-deoxygluconate transporter;protein_id=WP_001166063.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 10052 10726 . + . ID=gene-AC00_RS04035;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=AC00_RS04035;old_locus_tag=AC00_4422 NZ_JJLU01000129.1 Protein Homology CDS 10052 10726 . + 0 ID=cds-WP_032281938.1;Parent=gene-AC00_RS04035;Dbxref=GenBank:WP_032281938.1;Name=WP_032281938.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418346.2;locus_tag=AC00_RS04035;product=6-hydroxyaminopurine reductase;protein_id=WP_032281938.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 10832 12205 . - . ID=gene-AC00_RS04030;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=AC00_RS04030;old_locus_tag=AC00_4423 NZ_JJLU01000129.1 Protein Homology CDS 10832 12205 . - 0 ID=cds-WP_000580413.1;Parent=gene-AC00_RS04030;Dbxref=GenBank:WP_000580413.1;Name=WP_000580413.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312864.1;locus_tag=AC00_RS04030;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_000580413.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 12202 12900 . - . ID=gene-AC00_RS04025;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=AC00_RS04025;old_locus_tag=AC00_4424 NZ_JJLU01000129.1 Protein Homology CDS 12202 12900 . - 0 ID=cds-WP_001033722.1;Parent=gene-AC00_RS04025;Dbxref=GenBank:WP_001033722.1;Name=WP_001033722.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=AC00_RS04025;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_001033722.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 13050 13550 . + . ID=gene-AC00_RS04020;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=AC00_RS04020;old_locus_tag=AC00_4425 NZ_JJLU01000129.1 Protein Homology CDS 13050 13550 . + 0 ID=cds-WP_001223800.1;Parent=gene-AC00_RS04020;Dbxref=GenBank:WP_001223800.1;Name=WP_001223800.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026277.1;locus_tag=AC00_RS04020;product=cell-envelope stress modulator CpxP;protein_id=WP_001223800.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 13736 14716 . - . ID=gene-AC00_RS04015;Name=AC00_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04015;old_locus_tag=AC00_4426 NZ_JJLU01000129.1 Protein Homology CDS 13736 14716 . - 0 ID=cds-WP_032281939.1;Parent=gene-AC00_RS04015;Dbxref=GenBank:WP_032281939.1;Name=WP_032281939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985242.1;locus_tag=AC00_RS04015;product=phage integrase;protein_id=WP_032281939.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 14786 15079 . - . ID=gene-AC00_RS0125830;Name=AC00_RS0125830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125830 NZ_JJLU01000129.1 Protein Homology CDS 14786 15079 . - 0 ID=cds-WP_000777029.1;Parent=gene-AC00_RS0125830;Dbxref=GenBank:WP_000777029.1;Name=WP_000777029.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237179.1;locus_tag=AC00_RS0125830;product=helix-turn-helix domain-containing protein;protein_id=WP_000777029.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 15216 15488 . + . ID=gene-AC00_RS04010;Name=AC00_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04010;old_locus_tag=AC00_4427 NZ_JJLU01000129.1 Protein Homology CDS 15216 15488 . + 0 ID=cds-WP_001308179.1;Parent=gene-AC00_RS04010;Dbxref=GenBank:WP_001308179.1;Name=WP_001308179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369289.1;locus_tag=AC00_RS04010;product=Cox family DNA-binding protein;protein_id=WP_001308179.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 15491 15661 . + . ID=gene-AC00_RS30970;Name=AC00_RS30970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30970;old_locus_tag=AC00_4428 NZ_JJLU01000129.1 Protein Homology CDS 15491 15661 . + 0 ID=cds-WP_001005162.1;Parent=gene-AC00_RS30970;Dbxref=GenBank:WP_001005162.1;Name=WP_001005162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001530545.1;locus_tag=AC00_RS30970;product=hypothetical protein;protein_id=WP_001005162.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 15658 16158 . + . ID=gene-AC00_RS04005;Name=AC00_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04005;old_locus_tag=AC00_4429 NZ_JJLU01000129.1 Protein Homology CDS 15658 16158 . + 0 ID=cds-WP_000217677.1;Parent=gene-AC00_RS04005;Dbxref=GenBank:WP_000217677.1;Name=WP_000217677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441883.1;locus_tag=AC00_RS04005;product=hypothetical protein;protein_id=WP_000217677.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 16222 16446 . + . ID=gene-AC00_RS04000;Name=AC00_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS04000;old_locus_tag=AC00_4430 NZ_JJLU01000129.1 Protein Homology CDS 16222 16446 . + 0 ID=cds-WP_000557703.1;Parent=gene-AC00_RS04000;Dbxref=GenBank:WP_000557703.1;Name=WP_000557703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236090.1;locus_tag=AC00_RS04000;product=DUF2732 family protein;protein_id=WP_000557703.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 16446 16748 . + . ID=gene-AC00_RS03995;Name=AC00_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03995;old_locus_tag=AC00_4431 NZ_JJLU01000129.1 Protein Homology CDS 16446 16748 . + 0 ID=cds-WP_032281940.1;Parent=gene-AC00_RS03995;Dbxref=GenBank:WP_032281940.1;Name=WP_032281940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277953.1;locus_tag=AC00_RS03995;product=DUF5405 family protein;protein_id=WP_032281940.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 16748 16972 . + . ID=gene-AC00_RS03990;Name=AC00_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03990;old_locus_tag=AC00_4432 NZ_JJLU01000129.1 Protein Homology CDS 16748 16972 . + 0 ID=cds-WP_001113270.1;Parent=gene-AC00_RS03990;Dbxref=GenBank:WP_001113270.1;Name=WP_001113270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016242005.1;locus_tag=AC00_RS03990;product=TraR/DksA family transcriptional regulator;protein_id=WP_001113270.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 16969 17244 . + . ID=gene-AC00_RS03985;Name=AC00_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03985;old_locus_tag=AC00_4433 NZ_JJLU01000129.1 Protein Homology CDS 16969 17244 . + 0 ID=cds-WP_032281941.1;Parent=gene-AC00_RS03985;Dbxref=GenBank:WP_032281941.1;Name=WP_032281941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027668.1;locus_tag=AC00_RS03985;product=DUF5405 family protein;protein_id=WP_032281941.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 17234 19510 . + . ID=gene-AC00_RS03980;Name=AC00_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03980;old_locus_tag=AC00_4434 NZ_JJLU01000129.1 Protein Homology CDS 17234 19510 . + 0 ID=cds-WP_000268626.1;Parent=gene-AC00_RS03980;Dbxref=GenBank:WP_000268626.1;Name=WP_000268626.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001598736.1;locus_tag=AC00_RS03980;product=replication endonuclease;protein_id=WP_000268626.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 20648 21133 . + . ID=gene-AC00_RS03975;Name=AC00_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03975;old_locus_tag=AC00_4435 NZ_JJLU01000129.1 Protein Homology CDS 20648 21133 . + 0 ID=cds-WP_000119270.1;Parent=gene-AC00_RS03975;Dbxref=GenBank:WP_000119270.1;Name=WP_000119270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000119270.1;locus_tag=AC00_RS03975;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_000119270.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 21200 21799 . + . ID=gene-AC00_RS03970;Name=AC00_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03970;old_locus_tag=AC00_4436 NZ_JJLU01000129.1 Protein Homology CDS 21200 21799 . + 0 ID=cds-WP_000763338.1;Parent=gene-AC00_RS03970;Dbxref=GenBank:WP_000763338.1;Name=WP_000763338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763338.1;locus_tag=AC00_RS03970;product=hypothetical protein;protein_id=WP_000763338.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 21882 22823 . - . ID=gene-AC00_RS03965;Name=AC00_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03965;old_locus_tag=AC00_4437 NZ_JJLU01000129.1 Protein Homology CDS 21882 22823 . - 0 ID=cds-WP_001161722.1;Parent=gene-AC00_RS03965;Dbxref=GenBank:WP_001161722.1;Name=WP_001161722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517496.1;locus_tag=AC00_RS03965;product=hypothetical protein;protein_id=WP_001161722.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 23250 24284 . - . ID=gene-AC00_RS03960;Name=AC00_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03960;old_locus_tag=AC00_4439 NZ_JJLU01000129.1 Protein Homology CDS 23250 24284 . - 0 ID=cds-WP_032288360.1;Parent=gene-AC00_RS03960;Dbxref=GenBank:WP_032288360.1;Name=WP_032288360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752368.1;locus_tag=AC00_RS03960;product=phage portal protein;protein_id=WP_032288360.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 24284 26056 . - . ID=gene-AC00_RS03955;Name=AC00_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03955;old_locus_tag=AC00_4440 NZ_JJLU01000129.1 Protein Homology CDS 24284 26056 . - 0 ID=cds-WP_032288361.1;Parent=gene-AC00_RS03955;Dbxref=GenBank:WP_032288361.1;Name=WP_032288361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001357052.1;locus_tag=AC00_RS03955;product=terminase ATPase subunit family protein;protein_id=WP_032288361.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 26230 27084 . + . ID=gene-AC00_RS03950;Name=AC00_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03950;old_locus_tag=AC00_4441 NZ_JJLU01000129.1 Protein Homology CDS 26230 27084 . + 0 ID=cds-WP_001297840.1;Parent=gene-AC00_RS03950;Dbxref=GenBank:WP_001297840.1;Name=WP_001297840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001074418.1;locus_tag=AC00_RS03950;product=GPO family capsid scaffolding protein;protein_id=WP_001297840.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 27143 28216 . + . ID=gene-AC00_RS03945;Name=AC00_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03945;old_locus_tag=AC00_4442 NZ_JJLU01000129.1 Protein Homology CDS 27143 28216 . + 0 ID=cds-WP_001248583.1;Parent=gene-AC00_RS03945;Dbxref=GenBank:WP_001248583.1;Name=WP_001248583.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248534.1;locus_tag=AC00_RS03945;product=phage major capsid protein%2C P2 family;protein_id=WP_001248583.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 28220 28963 . + . ID=gene-AC00_RS03940;Name=AC00_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03940;old_locus_tag=AC00_4443 NZ_JJLU01000129.1 Protein Homology CDS 28220 28963 . + 0 ID=cds-WP_001593490.1;Parent=gene-AC00_RS03940;Dbxref=GenBank:WP_001593490.1;Name=WP_001593490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540320.1;locus_tag=AC00_RS03940;product=terminase endonuclease subunit;protein_id=WP_001593490.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 29063 29572 . + . ID=gene-AC00_RS03935;Name=AC00_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03935;old_locus_tag=AC00_4444 NZ_JJLU01000129.1 Protein Homology CDS 29063 29572 . + 0 ID=cds-WP_000988642.1;Parent=gene-AC00_RS03935;Dbxref=GenBank:WP_000988642.1;Name=WP_000988642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228322.1;locus_tag=AC00_RS03935;product=head completion/stabilization protein;protein_id=WP_000988642.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 29572 29775 . + . ID=gene-AC00_RS03930;Name=AC00_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03930;old_locus_tag=AC00_4445 NZ_JJLU01000129.1 Protein Homology CDS 29572 29775 . + 0 ID=cds-WP_000846399.1;Parent=gene-AC00_RS03930;Dbxref=GenBank:WP_000846399.1;Name=WP_000846399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228323.1;locus_tag=AC00_RS03930;product=tail protein X;protein_id=WP_000846399.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 29779 30060 . + . ID=gene-AC00_RS03925;Name=AC00_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03925;old_locus_tag=AC00_4446 NZ_JJLU01000129.1 Protein Homology CDS 29779 30060 . + 0 ID=cds-WP_000123124.1;Parent=gene-AC00_RS03925;Dbxref=GenBank:WP_000123124.1;Name=WP_000123124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123124.1;locus_tag=AC00_RS03925;product=phage holin family protein;protein_id=WP_000123124.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 30060 30557 . + . ID=gene-AC00_RS03920;Name=AC00_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03920;old_locus_tag=AC00_4447 NZ_JJLU01000129.1 Protein Homology CDS 30060 30557 . + 0 ID=cds-WP_001144101.1;Parent=gene-AC00_RS03920;Dbxref=GenBank:WP_001144101.1;Name=WP_001144101.1;Ontology_term=GO:0005975,GO:0003796,GO:0004553;gbkey=CDS;go_function=lysozyme activity|0003796||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016235441.1;locus_tag=AC00_RS03920;product=glycoside hydrolase family 24 protein;protein_id=WP_001144101.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 30572 30997 . + . ID=gene-AC00_RS03915;Name=AC00_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03915;old_locus_tag=AC00_4448 NZ_JJLU01000129.1 Protein Homology CDS 30572 30997 . + 0 ID=cds-WP_001593488.1;Parent=gene-AC00_RS03915;Dbxref=GenBank:WP_001593488.1;Name=WP_001593488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000736581.1;locus_tag=AC00_RS03915;product=DNZ54_00345 family protein;protein_id=WP_001593488.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 30985 31410 . + . ID=gene-AC00_RS03910;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=AC00_RS03910;old_locus_tag=AC00_4449 NZ_JJLU01000129.1 Protein Homology CDS 30985 31410 . + 0 ID=cds-WP_032288363.1;Parent=gene-AC00_RS03910;Dbxref=GenBank:WP_032288363.1;Name=WP_032288363.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585210.1;locus_tag=AC00_RS03910;product=Rz-like lysis system protein LysB;protein_id=WP_032288363.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 31292 31555 . + . ID=gene-AC00_RS31380;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC00_RS31380 NZ_JJLU01000129.1 Protein Homology CDS 31292 31555 . + 0 ID=cds-WP_225385161.1;Parent=gene-AC00_RS31380;Dbxref=GenBank:WP_225385161.1;Name=WP_225385161.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640305.1;locus_tag=AC00_RS31380;product=Rz1-like lysis system protein LysC;protein_id=WP_225385161.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 31518 31985 . + . ID=gene-AC00_RS03900;Name=AC00_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03900;old_locus_tag=AC00_4451 NZ_JJLU01000129.1 Protein Homology CDS 31518 31985 . + 0 ID=cds-WP_032281945.1;Parent=gene-AC00_RS03900;Dbxref=GenBank:WP_032281945.1;Name=WP_032281945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406878.1;locus_tag=AC00_RS03900;product=phage tail protein;protein_id=WP_032281945.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 31978 32430 . + . ID=gene-AC00_RS03895;Name=AC00_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03895;old_locus_tag=AC00_4452 NZ_JJLU01000129.1 Protein Homology CDS 31978 32430 . + 0 ID=cds-WP_032288364.1;Parent=gene-AC00_RS03895;Dbxref=GenBank:WP_032288364.1;Name=WP_032288364.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001795.1;locus_tag=AC00_RS03895;product=phage virion morphogenesis protein;protein_id=WP_032288364.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 32497 33132 . + . ID=gene-AC00_RS03890;Name=AC00_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03890;old_locus_tag=AC00_4453 NZ_JJLU01000129.1 Protein Homology CDS 32497 33132 . + 0 ID=cds-WP_032281948.1;Parent=gene-AC00_RS03890;Dbxref=GenBank:WP_032281948.1;Name=WP_032281948.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001093708.1;locus_tag=AC00_RS03890;product=phage baseplate assembly protein V;protein_id=WP_032281948.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 33129 33476 . + . ID=gene-AC00_RS03885;Name=AC00_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03885;old_locus_tag=AC00_4454 NZ_JJLU01000129.1 Protein Homology CDS 33129 33476 . + 0 ID=cds-WP_000127163.1;Parent=gene-AC00_RS03885;Dbxref=GenBank:WP_000127163.1;Name=WP_000127163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228331.1;locus_tag=AC00_RS03885;product=GPW/gp25 family protein;protein_id=WP_000127163.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 33481 34389 . + . ID=gene-AC00_RS03880;Name=AC00_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03880;old_locus_tag=AC00_4455 NZ_JJLU01000129.1 Protein Homology CDS 33481 34389 . + 0 ID=cds-WP_001121475.1;Parent=gene-AC00_RS03880;Dbxref=GenBank:WP_001121475.1;Name=WP_001121475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001121472.1;locus_tag=AC00_RS03880;product=baseplate assembly protein;protein_id=WP_001121475.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 34382 34993 . + . ID=gene-AC00_RS03875;Name=AC00_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03875;old_locus_tag=AC00_4456 NZ_JJLU01000129.1 Protein Homology CDS 34382 34993 . + 0 ID=cds-WP_001285340.1;Parent=gene-AC00_RS03875;Dbxref=GenBank:WP_001285340.1;Name=WP_001285340.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841548.1;locus_tag=AC00_RS03875;product=phage tail protein I;protein_id=WP_001285340.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 34990 36189 . + . ID=gene-AC00_RS0125835;Name=AC00_RS0125835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125835;old_locus_tag=AC00_4457 NZ_JJLU01000129.1 Protein Homology CDS 34990 36189 . + 0 ID=cds-WP_248790373.1;Parent=gene-AC00_RS0125835;Dbxref=GenBank:WP_248790373.1;Name=WP_248790373.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691087.1;locus_tag=AC00_RS0125835;product=phage tail protein;protein_id=WP_248790373.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 36186 36605 . + . ID=gene-AC00_RS03870;Name=AC00_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03870;old_locus_tag=AC00_4458 NZ_JJLU01000129.1 Protein Homology CDS 36186 36605 . + 0 ID=cds-WP_000782982.1;Parent=gene-AC00_RS03870;Dbxref=GenBank:WP_000782982.1;Name=WP_000782982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782987.1;locus_tag=AC00_RS03870;product=tail fiber assembly protein;protein_id=WP_000782982.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 36577 37008 . - . ID=gene-AC00_RS03865;Name=AC00_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03865;old_locus_tag=AC00_4459 NZ_JJLU01000129.1 Protein Homology CDS 36577 37008 . - 0 ID=cds-WP_050438671.1;Parent=gene-AC00_RS03865;Dbxref=GenBank:WP_050438671.1;Name=WP_050438671.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=AC00_RS03865;product=tail fiber assembly protein;protein_id=WP_050438671.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 37009 37443 . - . ID=gene-AC00_RS26670;Name=AC00_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26670 NZ_JJLU01000129.1 Protein Homology CDS 37009 37443 . - 0 ID=cds-WP_050438672.1;Parent=gene-AC00_RS26670;Dbxref=GenBank:WP_050438672.1;Name=WP_050438672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001338413.1;locus_tag=AC00_RS26670;product=hypothetical protein;protein_id=WP_050438672.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 37471 38064 . + . ID=gene-AC00_RS03860;Name=AC00_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03860;old_locus_tag=AC00_4460 NZ_JJLU01000129.1 Protein Homology CDS 37471 38064 . + 0 ID=cds-WP_000905097.1;Parent=gene-AC00_RS03860;Dbxref=GenBank:WP_000905097.1;Name=WP_000905097.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001755143.1;locus_tag=AC00_RS03860;product=recombinase family protein;protein_id=WP_000905097.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 38124 39314 . + . ID=gene-AC00_RS03855;Name=AC00_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03855;old_locus_tag=AC00_4461 NZ_JJLU01000129.1 Protein Homology CDS 38124 39314 . + 0 ID=cds-WP_001286709.1;Parent=gene-AC00_RS03855;Dbxref=GenBank:WP_001286709.1;Name=WP_001286709.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483446.1;locus_tag=AC00_RS03855;product=phage tail sheath protein;protein_id=WP_001286709.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 39327 39845 . + . ID=gene-AC00_RS03850;Name=AC00_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03850;old_locus_tag=AC00_4462 NZ_JJLU01000129.1 Protein Homology CDS 39327 39845 . + 0 ID=cds-WP_001251408.1;Parent=gene-AC00_RS03850;Dbxref=GenBank:WP_001251408.1;Name=WP_001251408.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554312.1;locus_tag=AC00_RS03850;product=phage major tail tube protein;protein_id=WP_001251408.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 39902 40177 . + . ID=gene-AC00_RS03845;Name=AC00_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03845;old_locus_tag=AC00_4463 NZ_JJLU01000129.1 Protein Homology CDS 39902 40177 . + 0 ID=cds-WP_032218890.1;Parent=gene-AC00_RS03845;Dbxref=GenBank:WP_032218890.1;Name=WP_032218890.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001719230.1;locus_tag=AC00_RS03845;product=phage tail assembly protein;protein_id=WP_032218890.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 40174 40329 . + . ID=gene-AC00_RS03840;Name=AC00_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03840;old_locus_tag=AC00_4464 NZ_JJLU01000129.1 Protein Homology CDS 40174 40329 . + 0 ID=cds-WP_000143830.1;Parent=gene-AC00_RS03840;Dbxref=GenBank:WP_000143830.1;Name=WP_000143830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000143828.1;locus_tag=AC00_RS03840;product=GpE family phage tail protein;protein_id=WP_000143830.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 40322 42769 . + . ID=gene-AC00_RS03835;Name=AC00_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03835;old_locus_tag=AC00_4465 NZ_JJLU01000129.1 Protein Homology CDS 40322 42769 . + 0 ID=cds-WP_032281952.1;Parent=gene-AC00_RS03835;Dbxref=GenBank:WP_032281952.1;Name=WP_032281952.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236410.1;locus_tag=AC00_RS03835;product=phage tail tape measure protein;protein_id=WP_032281952.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 42784 43263 . + . ID=gene-AC00_RS03830;Name=AC00_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03830;old_locus_tag=AC00_4466 NZ_JJLU01000129.1 Protein Homology CDS 42784 43263 . + 0 ID=cds-WP_000978897.1;Parent=gene-AC00_RS03830;Dbxref=GenBank:WP_000978897.1;Name=WP_000978897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000978924.1;locus_tag=AC00_RS03830;product=phage tail protein;protein_id=WP_000978897.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 43263 44426 . + . ID=gene-AC00_RS03825;Name=AC00_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03825;old_locus_tag=AC00_4467 NZ_JJLU01000129.1 Protein Homology CDS 43263 44426 . + 0 ID=cds-WP_032288365.1;Parent=gene-AC00_RS03825;Dbxref=GenBank:WP_032288365.1;Name=WP_032288365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157990.1;locus_tag=AC00_RS03825;product=phage late control D family protein;protein_id=WP_032288365.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 44509 44727 . + . ID=gene-AC00_RS0125845;Name=ogrK;gbkey=Gene;gene=ogrK;gene_biotype=protein_coding;locus_tag=AC00_RS0125845;old_locus_tag=AC00_4468 NZ_JJLU01000129.1 Protein Homology CDS 44509 44727 . + 0 ID=cds-WP_000468308.1;Parent=gene-AC00_RS0125845;Dbxref=GenBank:WP_000468308.1;Name=WP_000468308.1;gbkey=CDS;gene=ogrK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416586.1;locus_tag=AC00_RS0125845;product=prophage transcriptional regulator OgrK;protein_id=WP_000468308.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 44868 45509 . + . ID=gene-AC00_RS0125850;Name=AC00_RS0125850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125850;old_locus_tag=AC00_4469 NZ_JJLU01000129.1 Protein Homology CDS 44868 45509 . + 0 ID=cds-WP_000416606.1;Parent=gene-AC00_RS0125850;Dbxref=GenBank:WP_000416606.1;Name=WP_000416606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416606.1;locus_tag=AC00_RS0125850;product=hypothetical protein;protein_id=WP_000416606.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 45717 46619 . + . ID=gene-AC00_RS03820;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=AC00_RS03820;old_locus_tag=AC00_4470 NZ_JJLU01000129.1 Protein Homology CDS 45717 46619 . + 0 ID=cds-WP_001076742.1;Parent=gene-AC00_RS03820;Dbxref=GenBank:WP_001076742.1;Name=WP_001076742.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312867.1;locus_tag=AC00_RS03820;product=CDF family cation-efflux transporter FieF;protein_id=WP_001076742.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 46800 47762 . + . ID=gene-AC00_RS03815;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=AC00_RS03815;old_locus_tag=AC00_4471 NZ_JJLU01000129.1 Protein Homology CDS 46800 47762 . + 0 ID=cds-WP_000591795.1;Parent=gene-AC00_RS03815;Dbxref=GenBank:WP_000591795.1;Name=WP_000591795.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=AC00_RS03815;product=6-phosphofructokinase;protein_id=WP_000591795.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 48081 49070 . + . ID=gene-AC00_RS03810;Name=sbp;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=AC00_RS03810;old_locus_tag=AC00_4473 NZ_JJLU01000129.1 Protein Homology CDS 48081 49070 . + 0 ID=cds-WP_001045704.1;Parent=gene-AC00_RS03810;Dbxref=GenBank:WP_001045704.1;Name=WP_001045704.1;gbkey=CDS;gene=sbp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=AC00_RS03810;product=sulfate/thiosulfate ABC transporter substrate-binding protein Sbp;protein_id=WP_001045704.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 49177 49932 . + . ID=gene-AC00_RS03805;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=AC00_RS03805;old_locus_tag=AC00_4474 NZ_JJLU01000129.1 Protein Homology CDS 49177 49932 . + 0 ID=cds-WP_032281954.1;Parent=gene-AC00_RS03805;Dbxref=GenBank:WP_032281954.1;Name=WP_032281954.1;Ontology_term=GO:0008654,GO:0008715,GO:0016020;gbkey=CDS;gene=cdh;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol diphosphatase activity|0008715||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312870.1;locus_tag=AC00_RS03805;product=CDP-diacylglycerol diphosphatase;protein_id=WP_032281954.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 49987 50754 . - . ID=gene-AC00_RS03800;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AC00_RS03800;old_locus_tag=AC00_4475 NZ_JJLU01000129.1 Protein Homology CDS 49987 50754 . - 0 ID=cds-WP_001216325.1;Parent=gene-AC00_RS03800;Dbxref=GenBank:WP_001216325.1;Name=WP_001216325.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312871.1;locus_tag=AC00_RS03800;product=triose-phosphate isomerase;protein_id=WP_001216325.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 50862 51461 . - . ID=gene-AC00_RS03795;Name=yiiQ;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=AC00_RS03795;old_locus_tag=AC00_4476 NZ_JJLU01000129.1 Protein Homology CDS 50862 51461 . - 0 ID=cds-WP_000802226.1;Parent=gene-AC00_RS03795;Dbxref=GenBank:WP_000802226.1;Name=WP_000802226.1;gbkey=CDS;gene=yiiQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312872.1;locus_tag=AC00_RS03795;product=YiiQ family protein;protein_id=WP_000802226.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 51562 52002 . + . ID=gene-AC00_RS03790;Name=yiiR;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=AC00_RS03790;old_locus_tag=AC00_4477 NZ_JJLU01000129.1 Protein Homology CDS 51562 52002 . + 0 ID=cds-WP_000155257.1;Parent=gene-AC00_RS03790;Dbxref=GenBank:WP_000155257.1;Name=WP_000155257.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yiiR;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312873.1;locus_tag=AC00_RS03790;product=DUF805 domain-containing protein;protein_id=WP_000155257.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 52214 52513 . + . ID=gene-AC00_RS03785;Name=yiiS;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=AC00_RS03785;old_locus_tag=AC00_4478 NZ_JJLU01000129.1 Protein Homology CDS 52214 52513 . + 0 ID=cds-WP_000655986.1;Parent=gene-AC00_RS03785;Dbxref=GenBank:WP_000655986.1;Name=WP_000655986.1;gbkey=CDS;gene=yiiS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312874.1;locus_tag=AC00_RS03785;product=DUF406 domain-containing protein;protein_id=WP_000655986.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 52540 52968 . + . ID=gene-AC00_RS03780;Name=uspD;gbkey=Gene;gene=uspD;gene_biotype=protein_coding;locus_tag=AC00_RS03780;old_locus_tag=AC00_4479 NZ_JJLU01000129.1 Protein Homology CDS 52540 52968 . + 0 ID=cds-WP_000323555.1;Parent=gene-AC00_RS03780;Dbxref=GenBank:WP_000323555.1;Name=WP_000323555.1;gbkey=CDS;gene=uspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312875.1;locus_tag=AC00_RS03780;product=universal stress protein UspD;protein_id=WP_000323555.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 52973 53719 . - . ID=gene-AC00_RS03775;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=AC00_RS03775;old_locus_tag=AC00_4480 NZ_JJLU01000129.1 Protein Homology CDS 52973 53719 . - 0 ID=cds-WP_000796310.1;Parent=gene-AC00_RS03775;Dbxref=GenBank:WP_000796310.1;Name=WP_000796310.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312876.1;locus_tag=AC00_RS03775;product=ferredoxin--NADP(+) reductase;protein_id=WP_000796310.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 53816 54826 . - . ID=gene-AC00_RS03770;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AC00_RS03770;old_locus_tag=AC00_4481 NZ_JJLU01000129.1 Protein Homology CDS 53816 54826 . - 0 ID=cds-WP_001250644.1;Parent=gene-AC00_RS03770;Dbxref=GenBank:WP_001250644.1;Name=WP_001250644.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418360.1;locus_tag=AC00_RS03770;product=class II fructose-bisphosphatase;protein_id=WP_001250644.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 55056 56564 . - . ID=gene-AC00_RS03765;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AC00_RS03765;old_locus_tag=AC00_4482 NZ_JJLU01000129.1 Protein Homology CDS 55056 56564 . - 0 ID=cds-WP_000136788.1;Parent=gene-AC00_RS03765;Dbxref=GenBank:WP_000136788.1;Name=WP_000136788.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312878.1;locus_tag=AC00_RS03765;product=glycerol kinase GlpK;protein_id=WP_000136788.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 56587 57432 . - . ID=gene-AC00_RS03760;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=AC00_RS03760;old_locus_tag=AC00_4483 NZ_JJLU01000129.1 Protein Homology CDS 56587 57432 . - 0 ID=cds-WP_032281955.1;Parent=gene-AC00_RS03760;Dbxref=GenBank:WP_032281955.1;Name=WP_032281955.1;gbkey=CDS;gene=glpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312879.1;locus_tag=AC00_RS03760;product=glycerol uptake facilitator protein GlpF;protein_id=WP_032281955.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 57858 58103 . + . ID=gene-AC00_RS03755;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=AC00_RS03755;old_locus_tag=AC00_4484 NZ_JJLU01000129.1 Protein Homology CDS 57858 58103 . + 0 ID=cds-WP_001296623.1;Parent=gene-AC00_RS03755;Dbxref=GenBank:WP_001296623.1;Name=WP_001296623.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=AC00_RS03755;product=septal ring assembly protein ZapB;protein_id=WP_001296623.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 58142 58768 . - . ID=gene-AC00_RS29865;Name=AC00_RS29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29865;old_locus_tag=AC00_4485 NZ_JJLU01000129.1 Protein Homology CDS 58142 58768 . - 0 ID=cds-WP_000232688.1;Parent=gene-AC00_RS29865;Dbxref=GenBank:WP_000232688.1;Name=WP_000232688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312881.2;locus_tag=AC00_RS29865;product=hypothetical protein;protein_id=WP_000232688.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 58891 59565 . - . ID=gene-AC00_RS03750;Name=AC00_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03750;old_locus_tag=AC00_4486 NZ_JJLU01000129.1 Protein Homology CDS 58891 59565 . - 0 ID=cds-WP_032281973.1;Parent=gene-AC00_RS03750;Dbxref=GenBank:WP_032281973.1;Name=WP_032281973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312882.1;locus_tag=AC00_RS03750;product=hypothetical protein;protein_id=WP_032281973.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 59625 60110 . - . ID=gene-AC00_RS03745;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=AC00_RS03745;old_locus_tag=AC00_4487 NZ_JJLU01000129.1 Protein Homology CDS 59625 60110 . - 0 ID=cds-WP_000872908.1;Parent=gene-AC00_RS03745;Dbxref=GenBank:WP_000872908.1;Name=WP_000872908.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=AC00_RS03745;product=ribonuclease E activity regulator RraA;protein_id=WP_000872908.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 60203 61129 . - . ID=gene-AC00_RS03740;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=AC00_RS03740;old_locus_tag=AC00_4488 NZ_JJLU01000129.1 Protein Homology CDS 60203 61129 . - 0 ID=cds-WP_001308187.1;Parent=gene-AC00_RS03740;Dbxref=GenBank:WP_001308187.1;Name=WP_001308187.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312884.1;locus_tag=AC00_RS03740;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_001308187.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 61196 62527 . - . ID=gene-AC00_RS03735;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AC00_RS03735;old_locus_tag=AC00_4489 NZ_JJLU01000129.1 Protein Homology CDS 61196 62527 . - 0 ID=cds-WP_001293341.1;Parent=gene-AC00_RS03735;Dbxref=GenBank:WP_001293341.1;Name=WP_001293341.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=AC00_RS03735;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_001293341.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 62537 63067 . - . ID=gene-AC00_RS03730;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AC00_RS03730;old_locus_tag=AC00_4490 NZ_JJLU01000129.1 Protein Homology CDS 62537 63067 . - 0 ID=cds-WP_000208242.1;Parent=gene-AC00_RS03730;Dbxref=GenBank:WP_000208242.1;Name=WP_000208242.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312886.1;locus_tag=AC00_RS03730;product=ATP-dependent protease subunit HslV;protein_id=WP_000208242.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 63160 64119 . - . ID=gene-AC00_RS03725;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=AC00_RS03725;old_locus_tag=AC00_4491 NZ_JJLU01000129.1 Protein Homology CDS 63160 64119 . - 0 ID=cds-WP_000068837.1;Parent=gene-AC00_RS03725;Dbxref=GenBank:WP_000068837.1;Name=WP_000068837.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709737.1;locus_tag=AC00_RS03725;product=cell division protein FtsN;protein_id=WP_000068837.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 64211 65236 . - . ID=gene-AC00_RS03720;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=AC00_RS03720;old_locus_tag=AC00_4492 NZ_JJLU01000129.1 Protein Homology CDS 64211 65236 . - 0 ID=cds-WP_000644904.1;Parent=gene-AC00_RS03720;Dbxref=GenBank:WP_000644904.1;Name=WP_000644904.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312888.1;locus_tag=AC00_RS03720;product=DNA-binding transcriptional regulator CytR;protein_id=WP_000644904.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 65392 67590 . - . ID=gene-AC00_RS03715;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AC00_RS03715;old_locus_tag=AC00_4494 NZ_JJLU01000129.1 Protein Homology CDS 65392 67590 . - 0 ID=cds-WP_032281956.1;Parent=gene-AC00_RS03715;Dbxref=GenBank:WP_032281956.1;Name=WP_032281956.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418370.1;locus_tag=AC00_RS03715;product=primosomal protein N';protein_id=WP_032281956.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 67793 68005 . + . ID=gene-AC00_RS03710;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AC00_RS03710;old_locus_tag=AC00_4495 NZ_JJLU01000129.1 Protein Homology CDS 67793 68005 . + 0 ID=cds-WP_000710769.1;Parent=gene-AC00_RS03710;Dbxref=GenBank:WP_000710769.1;Name=WP_000710769.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=AC00_RS03710;product=50S ribosomal protein L31;protein_id=WP_000710769.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 68066 68674 . - . ID=gene-AC00_RS03705;Name=yiiX;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=AC00_RS03705;old_locus_tag=AC00_4496 NZ_JJLU01000129.1 Protein Homology CDS 68066 68674 . - 0 ID=cds-WP_000877403.1;Parent=gene-AC00_RS03705;Dbxref=GenBank:WP_000877403.1;Name=WP_000877403.1;gbkey=CDS;gene=yiiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312893.1;locus_tag=AC00_RS03705;product=YiiX family permuted papain-like enzyme;protein_id=WP_000877403.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 68858 69175 . - . ID=gene-AC00_RS03700;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=AC00_RS03700;old_locus_tag=AC00_4497 NZ_JJLU01000129.1 Protein Homology CDS 68858 69175 . - 0 ID=cds-WP_000852812.1;Parent=gene-AC00_RS03700;Dbxref=GenBank:WP_000852812.1;Name=WP_000852812.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=AC00_RS03700;product=met regulon transcriptional regulator MetJ;protein_id=WP_000852812.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 69452 70612 . + . ID=gene-AC00_RS03695;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=AC00_RS03695;old_locus_tag=AC00_4498 NZ_JJLU01000129.1 Protein Homology CDS 69452 70612 . + 0 ID=cds-WP_000197201.1;Parent=gene-AC00_RS03695;Dbxref=GenBank:WP_000197201.1;Name=WP_000197201.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312895.1;locus_tag=AC00_RS03695;product=cystathionine gamma-synthase;protein_id=WP_000197201.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 70615 73047 . + . ID=gene-AC00_RS03690;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;locus_tag=AC00_RS03690;old_locus_tag=AC00_4499 NZ_JJLU01000129.1 Protein Homology CDS 70615 73047 . + 0 ID=cds-WP_000110783.1;Parent=gene-AC00_RS03690;Dbxref=GenBank:WP_000110783.1;Name=WP_000110783.1;gbkey=CDS;gene=metL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=AC00_RS03690;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_000110783.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 73075 73320 . - . ID=gene-AC00_RS29875;Name=AC00_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29875;old_locus_tag=AC00_4500 NZ_JJLU01000129.1 GeneMarkS-2+ CDS 73075 73320 . - 0 ID=cds-WP_000660587.1;Parent=gene-AC00_RS29875;Dbxref=GenBank:WP_000660587.1;Name=WP_000660587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS29875;product=hypothetical protein;protein_id=WP_000660587.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 73396 74286 . + . ID=gene-AC00_RS03685;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AC00_RS03685;old_locus_tag=AC00_4501 NZ_JJLU01000129.1 Protein Homology CDS 73396 74286 . + 0 ID=cds-WP_000007523.1;Parent=gene-AC00_RS03685;Dbxref=GenBank:WP_000007523.1;Name=WP_000007523.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=AC00_RS03685;product=methylenetetrahydrofolate reductase;protein_id=WP_000007523.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 74615 76795 . + . ID=gene-AC00_RS03680;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=AC00_RS03680;old_locus_tag=AC00_4502 NZ_JJLU01000129.1 Protein Homology CDS 74615 76795 . + 0 ID=cds-WP_001297636.1;Parent=gene-AC00_RS03680;Dbxref=GenBank:WP_001297636.1;Name=WP_001297636.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312898.1;locus_tag=AC00_RS03680;product=catalase/peroxidase HPI;protein_id=WP_001297636.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 76889 77794 . + . ID=gene-AC00_RS03675;Name=yijE;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=AC00_RS03675;old_locus_tag=AC00_4503 NZ_JJLU01000129.1 Protein Homology CDS 76889 77794 . + 0 ID=cds-WP_032281957.1;Parent=gene-AC00_RS03675;Dbxref=GenBank:WP_032281957.1;Name=WP_032281957.1;gbkey=CDS;gene=yijE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312899.2;locus_tag=AC00_RS03675;product=cystine transporter YijE;protein_id=WP_032281957.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 77821 78438 . - . ID=gene-AC00_RS03670;Name=yijF;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=AC00_RS03670;old_locus_tag=AC00_4504 NZ_JJLU01000129.1 Protein Homology CDS 77821 78438 . - 0 ID=cds-WP_032288367.1;Parent=gene-AC00_RS03670;Dbxref=GenBank:WP_032288367.1;Name=WP_032288367.1;gbkey=CDS;gene=yijF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312900.1;locus_tag=AC00_RS03670;product=DUF1287 domain-containing protein;protein_id=WP_032288367.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 78713 79816 . - . ID=gene-AC00_RS03665;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=AC00_RS03665;old_locus_tag=AC00_4505 NZ_JJLU01000129.1 Protein Homology CDS 78713 79816 . - 0 ID=cds-WP_032281959.1;Parent=gene-AC00_RS03665;Dbxref=GenBank:WP_032281959.1;Name=WP_032281959.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418380.4;locus_tag=AC00_RS03665;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_032281959.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 79827 80489 . - . ID=gene-AC00_RS03660;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=AC00_RS03660;old_locus_tag=AC00_4506 NZ_JJLU01000129.1 Protein Homology CDS 79827 80489 . - 0 ID=cds-WP_000424845.1;Parent=gene-AC00_RS03660;Dbxref=GenBank:WP_000424845.1;Name=WP_000424845.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312902.1;locus_tag=AC00_RS03660;product=fructose-6-phosphate aldolase;protein_id=WP_000424845.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 80501 83002 . - . ID=gene-AC00_RS03655;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=AC00_RS03655;old_locus_tag=AC00_4507 NZ_JJLU01000129.1 Protein Homology CDS 80501 83002 . - 0 ID=cds-WP_032281960.1;Parent=gene-AC00_RS03655;Dbxref=GenBank:WP_032281960.1;Name=WP_032281960.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312903.2;locus_tag=AC00_RS03655;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_032281960.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 83311 84390 . + . ID=gene-AC00_RS03650;Name=frwC;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=AC00_RS03650;old_locus_tag=AC00_4508 NZ_JJLU01000129.1 Protein Homology CDS 83311 84390 . + 0 ID=cds-WP_001004445.1;Parent=gene-AC00_RS03650;Dbxref=GenBank:WP_001004445.1;Name=WP_001004445.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=frwC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=AC00_RS03650;product=PTS fructose transporter subunit EIIC;protein_id=WP_001004445.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 84405 84725 . + . ID=gene-AC00_RS03645;Name=frwB;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=AC00_RS03645;old_locus_tag=AC00_4509 NZ_JJLU01000129.1 Protein Homology CDS 84405 84725 . + 0 ID=cds-WP_032281961.1;Parent=gene-AC00_RS03645;Dbxref=GenBank:WP_032281961.1;Name=WP_032281961.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;gene=frwB;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312906.1;locus_tag=AC00_RS03645;product=PTS fructose-like transporter subunit IIB;protein_id=WP_032281961.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 84776 87073 . + . ID=gene-AC00_RS03640;Name=pflD;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=AC00_RS03640;old_locus_tag=AC00_4510 NZ_JJLU01000129.1 Protein Homology CDS 84776 87073 . + 0 ID=cds-WP_032281962.1;Parent=gene-AC00_RS03640;Dbxref=GenBank:WP_032281962.1;Name=WP_032281962.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pflD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312907.1;locus_tag=AC00_RS03640;product=formate C-acetyltransferase;protein_id=WP_032281962.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 87039 87917 . + . ID=gene-AC00_RS03635;Name=pflC;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=AC00_RS03635;old_locus_tag=AC00_4511 NZ_JJLU01000129.1 Protein Homology CDS 87039 87917 . + 0 ID=cds-WP_032281963.1;Parent=gene-AC00_RS03635;Dbxref=GenBank:WP_032281963.1;Name=WP_032281963.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=pflC;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312908.3;locus_tag=AC00_RS03635;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_032281963.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 87919 88260 . + . ID=gene-AC00_RS03630;Name=frwD;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=AC00_RS03630;old_locus_tag=AC00_4512 NZ_JJLU01000129.1 Protein Homology CDS 87919 88260 . + 0 ID=cds-WP_000323846.1;Parent=gene-AC00_RS03630;Dbxref=GenBank:WP_000323846.1;Name=WP_000323846.1;gbkey=CDS;gene=frwD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418388.1;locus_tag=AC00_RS03630;product=PTS fructose-like transporter subunit IIB;protein_id=WP_000323846.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 88247 89098 . - . ID=gene-AC00_RS03625;Name=yijO;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=AC00_RS03625;old_locus_tag=AC00_4513 NZ_JJLU01000129.1 Protein Homology CDS 88247 89098 . - 0 ID=cds-WP_032281964.1;Parent=gene-AC00_RS03625;Dbxref=GenBank:WP_032281964.1;Name=WP_032281964.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=yijO;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312910.1;locus_tag=AC00_RS03625;product=helix-turn-helix transcriptional regulator;protein_id=WP_032281964.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 89313 91046 . - . ID=gene-AC00_RS03620;Name=eptC;gbkey=Gene;gene=eptC;gene_biotype=protein_coding;locus_tag=AC00_RS03620;old_locus_tag=AC00_4514 NZ_JJLU01000129.1 Protein Homology CDS 89313 91046 . - 0 ID=cds-WP_032281965.1;Parent=gene-AC00_RS03620;Dbxref=GenBank:WP_032281965.1;Name=WP_032281965.1;gbkey=CDS;gene=eptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418390.1;locus_tag=AC00_RS03620;product=phosphoethanolamine transferase CptA;protein_id=WP_032281965.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 91229 93880 . - . ID=gene-AC00_RS03615;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=AC00_RS03615;old_locus_tag=AC00_4515 NZ_JJLU01000129.1 Protein Homology CDS 91229 93880 . - 0 ID=cds-WP_001005579.1;Parent=gene-AC00_RS03615;Dbxref=GenBank:WP_001005579.1;Name=WP_001005579.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AC00_RS03615;product=phosphoenolpyruvate carboxylase;protein_id=WP_001005579.1;transl_table=11 NZ_JJLU01000129.1 RefSeq gene 94355 95138 . - . ID=gene-AC00_RS03610;Name=argE;end_range=95138,.;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AC00_RS03610;old_locus_tag=AC00_4517;partial=true NZ_JJLU01000129.1 Protein Homology CDS 94355 95138 . - 1 ID=cds-WP_032288368.1;Parent=gene-AC00_RS03610;Dbxref=GenBank:WP_032288368.1;Name=WP_032288368.1;Ontology_term=GO:0006526,GO:0019213;end_range=95138,.;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418392.1;locus_tag=AC00_RS03610;partial=true;product=acetylornithine deacetylase;protein_id=WP_032288368.1;transl_table=11 ##sequence-region NZ_JJLU01000130.1 1 18132 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000130.1 RefSeq region 1 18132 . + . ID=NZ_JJLU01000130.1:1..18132;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000130.1 RefSeq gene 1 789 . - . ID=gene-AC00_RS03605;Name=AC00_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03605;old_locus_tag=AC00_4518;partial=true;start_range=.,1 NZ_JJLU01000130.1 Protein Homology CDS 1 789 . - 0 ID=cds-WP_021554688.1;Parent=gene-AC00_RS03605;Dbxref=GenBank:WP_021554688.1;Name=WP_021554688.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=AC00_RS03605;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=WP_021554688.1;start_range=.,1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 1007 1393 . - . ID=gene-AC00_RS0125875;Name=AC00_RS0125875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125875;old_locus_tag=AC00_4519 NZ_JJLU01000130.1 GeneMarkS-2+ CDS 1007 1393 . - 0 ID=cds-WP_148725569.1;Parent=gene-AC00_RS0125875;Dbxref=GenBank:WP_148725569.1;Name=WP_148725569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS0125875;product=hypothetical protein;protein_id=WP_148725569.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 1510 2661 . - . ID=gene-AC00_RS03600;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=AC00_RS03600;old_locus_tag=AC00_4520 NZ_JJLU01000130.1 Protein Homology CDS 1510 2661 . - 0 ID=cds-WP_032281967.1;Parent=gene-AC00_RS03600;Dbxref=GenBank:WP_032281967.1;Name=WP_032281967.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312913.1;locus_tag=AC00_RS03600;product=acetylornithine deacetylase;protein_id=WP_032281967.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 2815 3819 . + . ID=gene-AC00_RS03595;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=AC00_RS03595;old_locus_tag=AC00_4521 NZ_JJLU01000130.1 Protein Homology CDS 2815 3819 . + 0 ID=cds-WP_032281968.1;Parent=gene-AC00_RS03595;Dbxref=GenBank:WP_032281968.1;Name=WP_032281968.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=AC00_RS03595;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_032281968.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 3827 4603 . + . ID=gene-AC00_RS03590;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=AC00_RS03590;old_locus_tag=AC00_4522 NZ_JJLU01000130.1 Protein Homology CDS 3827 4603 . + 0 ID=cds-WP_077757435.1;Parent=gene-AC00_RS03590;Dbxref=GenBank:WP_077757435.1;Name=WP_077757435.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=AC00_RS03590;product=acetylglutamate kinase;protein_id=WP_077757435.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 4664 6037 . + . ID=gene-AC00_RS03585;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=AC00_RS03585;old_locus_tag=AC00_4523 NZ_JJLU01000130.1 Protein Homology CDS 4664 6037 . + 0 ID=cds-WP_001230083.1;Parent=gene-AC00_RS03585;Dbxref=GenBank:WP_001230083.1;Name=WP_001230083.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418395.1;locus_tag=AC00_RS03585;product=argininosuccinate lyase;protein_id=WP_001230083.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 6305 7222 . + . ID=gene-AC00_RS03580;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=AC00_RS03580;old_locus_tag=AC00_4524 NZ_JJLU01000130.1 Protein Homology CDS 6305 7222 . + 0 ID=cds-WP_001025939.1;Parent=gene-AC00_RS03580;Dbxref=GenBank:WP_001025939.1;Name=WP_001025939.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=AC00_RS03580;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_001025939.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 7205 8605 . - . ID=gene-AC00_RS03575;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AC00_RS03575;old_locus_tag=AC00_4525 NZ_JJLU01000130.1 Protein Homology CDS 7205 8605 . - 0 ID=cds-WP_001120810.1;Parent=gene-AC00_RS03575;Dbxref=GenBank:WP_001120810.1;Name=WP_001120810.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418397.2;locus_tag=AC00_RS03575;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_001120810.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 8935 10101 . + . ID=gene-AC00_RS03570;Name=AC00_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03570;old_locus_tag=AC00_4526 NZ_JJLU01000130.1 Protein Homology CDS 8935 10101 . + 0 ID=cds-WP_000569561.1;Parent=gene-AC00_RS03570;Dbxref=GenBank:WP_000569561.1;Name=WP_000569561.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312919.1;locus_tag=AC00_RS03570;product=M20 aminoacylase family protein;protein_id=WP_000569561.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 10144 11460 . + . ID=gene-AC00_RS03565;Name=AC00_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03565;old_locus_tag=AC00_4527 NZ_JJLU01000130.1 Protein Homology CDS 10144 11460 . + 0 ID=cds-WP_032288370.1;Parent=gene-AC00_RS03565;Dbxref=GenBank:WP_032288370.1;Name=WP_032288370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312920.1;locus_tag=AC00_RS03565;product=citrate-proton symporter;protein_id=WP_032288370.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 11564 12214 . + . ID=gene-AC00_RS03560;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=AC00_RS03560;old_locus_tag=AC00_4528 NZ_JJLU01000130.1 Protein Homology CDS 11564 12214 . + 0 ID=cds-WP_139300239.1;Parent=gene-AC00_RS03560;Dbxref=GenBank:WP_139300239.1;Name=WP_139300239.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460670.1;locus_tag=AC00_RS03560;product=HTH-type transcriptional repressor FabR;protein_id=WP_139300239.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 12214 12573 . + . ID=gene-AC00_RS03555;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=AC00_RS03555;old_locus_tag=AC00_4529 NZ_JJLU01000130.1 Protein Homology CDS 12214 12573 . + 0 ID=cds-WP_000806411.1;Parent=gene-AC00_RS03555;Dbxref=GenBank:WP_000806411.1;Name=WP_000806411.1;gbkey=CDS;gene=yijD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312922.1;locus_tag=AC00_RS03555;product=YijD family membrane protein;protein_id=WP_000806411.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 12613 13713 . - . ID=gene-AC00_RS03550;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=AC00_RS03550;old_locus_tag=AC00_4530 NZ_JJLU01000130.1 Protein Homology CDS 12613 13713 . - 0 ID=cds-WP_000187008.1;Parent=gene-AC00_RS03550;Dbxref=GenBank:WP_000187008.1;Name=WP_000187008.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312923.1;locus_tag=AC00_RS03550;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_000187008.1;transl_table=11 NZ_JJLU01000130.1 cmsearch riboswitch 13827 14016 . + . ID=id-NZ_JJLU01000130.1:13827..14016;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLU01000130.1 RefSeq gene 14082 15965 . + . ID=gene-AC00_RS03545;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=AC00_RS03545;old_locus_tag=AC00_4531 NZ_JJLU01000130.1 Protein Homology CDS 14082 15965 . + 0 ID=cds-WP_032281970.1;Parent=gene-AC00_RS03545;Dbxref=GenBank:WP_032281970.1;Name=WP_032281970.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224408.1;locus_tag=AC00_RS03545;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_032281970.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 15910 16767 . + . ID=gene-AC00_RS03540;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AC00_RS03540;old_locus_tag=AC00_4532 NZ_JJLU01000130.1 Protein Homology CDS 15910 16767 . + 0 ID=cds-WP_000201819.1;Parent=gene-AC00_RS03540;Dbxref=GenBank:WP_000201819.1;Name=WP_000201819.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312925.2;locus_tag=AC00_RS03540;product=glutamate racemase;protein_id=WP_000201819.1;transl_table=11 NZ_JJLU01000130.1 RefSeq gene 17141 18132 . + . ID=gene-AC00_RS03535;Name=AC00_RS03535;end_range=18132,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS03535;old_locus_tag=AC00_4533;partial=true NZ_JJLU01000130.1 cmsearch rRNA 17141 18132 . + . ID=rna-AC00_RS03535;Parent=gene-AC00_RS03535;Dbxref=RFAM:RF00177;end_range=18132,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03535;partial=true;product=16S ribosomal RNA NZ_JJLU01000130.1 cmsearch exon 17141 18132 . + . ID=exon-AC00_RS03535-1;Parent=rna-AC00_RS03535;Dbxref=RFAM:RF00177;end_range=18132,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03535;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLU01000131.1 1 7796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000131.1 RefSeq region 1 7796 . + . ID=NZ_JJLU01000131.1:1..7796;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000131.1 RefSeq gene 68 2970 . + . ID=gene-AC00_RS03530;Name=AC00_RS03530;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS03530;old_locus_tag=AC00_4534 NZ_JJLU01000131.1 cmsearch rRNA 68 2970 . + . ID=rna-AC00_RS03530;Parent=gene-AC00_RS03530;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03530;product=23S ribosomal RNA NZ_JJLU01000131.1 cmsearch exon 68 2970 . + . ID=exon-AC00_RS03530-1;Parent=rna-AC00_RS03530;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03530;product=23S ribosomal RNA NZ_JJLU01000131.1 RefSeq gene 3065 3180 . + . ID=gene-AC00_RS03525;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS03525;old_locus_tag=AC00_4536 NZ_JJLU01000131.1 cmsearch rRNA 3065 3180 . + . ID=rna-AC00_RS03525;Parent=gene-AC00_RS03525;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03525;product=5S ribosomal RNA NZ_JJLU01000131.1 cmsearch exon 3065 3180 . + . ID=exon-AC00_RS03525-1;Parent=rna-AC00_RS03525;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03525;product=5S ribosomal RNA NZ_JJLU01000131.1 RefSeq gene 3317 4345 . + . ID=gene-AC00_RS03520;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AC00_RS03520;old_locus_tag=AC00_4537 NZ_JJLU01000131.1 Protein Homology CDS 3317 4345 . + 0 ID=cds-WP_001016672.1;Parent=gene-AC00_RS03520;Dbxref=GenBank:WP_001016672.1;Name=WP_001016672.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312926.1;locus_tag=AC00_RS03520;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001016672.1;transl_table=11 NZ_JJLU01000131.1 RefSeq gene 4342 5307 . + . ID=gene-AC00_RS03515;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=AC00_RS03515;old_locus_tag=AC00_4538 NZ_JJLU01000131.1 Protein Homology CDS 4342 5307 . + 0 ID=cds-WP_032281974.1;Parent=gene-AC00_RS03515;Dbxref=GenBank:WP_032281974.1;Name=WP_032281974.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312927.1;locus_tag=AC00_RS03515;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_032281974.1;transl_table=11 NZ_JJLU01000131.1 RefSeq gene 5336 6286 . - . ID=gene-AC00_RS03510;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=AC00_RS03510;old_locus_tag=AC00_4539 NZ_JJLU01000131.1 Protein Homology CDS 5336 6286 . - 0 ID=cds-WP_000023081.1;Parent=gene-AC00_RS03510;Dbxref=GenBank:WP_000023081.1;Name=WP_000023081.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=AC00_RS03510;product=type I pantothenate kinase;protein_id=WP_000023081.1;transl_table=11 NZ_JJLU01000131.1 RefSeq gene 6648 6723 . + . ID=gene-AC00_RS03505;Name=AC00_RS03505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS03505;old_locus_tag=AC00_4541 NZ_JJLU01000131.1 tRNAscan-SE tRNA 6648 6723 . + . ID=rna-AC00_RS03505;Parent=gene-AC00_RS03505;anticodon=(pos:6681..6683);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03505;product=tRNA-Thr NZ_JJLU01000131.1 tRNAscan-SE exon 6648 6723 . + . ID=exon-AC00_RS03505-1;Parent=rna-AC00_RS03505;anticodon=(pos:6681..6683);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03505;product=tRNA-Thr NZ_JJLU01000131.1 RefSeq gene 6732 6816 . + . ID=gene-AC00_RS03500;Name=AC00_RS03500;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS03500;old_locus_tag=AC00_4542 NZ_JJLU01000131.1 tRNAscan-SE tRNA 6732 6816 . + . ID=rna-AC00_RS03500;Parent=gene-AC00_RS03500;anticodon=(pos:6766..6768);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03500;product=tRNA-Tyr NZ_JJLU01000131.1 tRNAscan-SE exon 6732 6816 . + . ID=exon-AC00_RS03500-1;Parent=rna-AC00_RS03500;anticodon=(pos:6766..6768);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03500;product=tRNA-Tyr NZ_JJLU01000131.1 RefSeq gene 6933 7007 . + . ID=gene-AC00_RS03495;Name=AC00_RS03495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS03495;old_locus_tag=AC00_4543 NZ_JJLU01000131.1 tRNAscan-SE tRNA 6933 7007 . + . ID=rna-AC00_RS03495;Parent=gene-AC00_RS03495;anticodon=(pos:6966..6968);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03495;product=tRNA-Gly NZ_JJLU01000131.1 tRNAscan-SE exon 6933 7007 . + . ID=exon-AC00_RS03495-1;Parent=rna-AC00_RS03495;anticodon=(pos:6966..6968);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03495;product=tRNA-Gly NZ_JJLU01000131.1 RefSeq gene 7014 7089 . + . ID=gene-AC00_RS03490;Name=AC00_RS03490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS03490;old_locus_tag=AC00_4544 NZ_JJLU01000131.1 tRNAscan-SE tRNA 7014 7089 . + . ID=rna-AC00_RS03490;Parent=gene-AC00_RS03490;anticodon=(pos:7047..7049);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03490;product=tRNA-Thr NZ_JJLU01000131.1 tRNAscan-SE exon 7014 7089 . + . ID=exon-AC00_RS03490-1;Parent=rna-AC00_RS03490;anticodon=(pos:7047..7049);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS03490;product=tRNA-Thr NZ_JJLU01000131.1 RefSeq gene 7204 7796 . + . ID=gene-AC00_RS03485;Name=AC00_RS03485;end_range=7796,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03485;old_locus_tag=AC00_4545;partial=true NZ_JJLU01000131.1 Protein Homology CDS 7204 7796 . + 0 ID=cds-WP_000031754.1-2;Parent=gene-AC00_RS03485;Dbxref=GenBank:WP_000031754.1;Name=WP_000031754.1;Ontology_term=GO:0003924,GO:0005525;end_range=7796,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC00_RS03485;partial=true;product=GTP-binding protein;protein_id=WP_000031754.1;transl_table=11 ##sequence-region NZ_JJLU01000132.1 1 32218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000132.1 RefSeq region 1 32218 . + . ID=NZ_JJLU01000132.1:1..32218;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000132.1 RefSeq pseudogene 1 353 . + . ID=gene-AC00_RS03480;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AC00_RS03480;old_locus_tag=AC00_4546;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000132.1 Protein Homology CDS 1 353 . + 2 ID=cds-AC00_RS03480;Parent=gene-AC00_RS03480;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312930.1;locus_tag=AC00_RS03480;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 583 966 . + . ID=gene-AC00_RS03475;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AC00_RS03475;old_locus_tag=AC00_4547 NZ_JJLU01000132.1 Protein Homology CDS 583 966 . + 0 ID=cds-WP_001275702.1;Parent=gene-AC00_RS03475;Dbxref=GenBank:WP_001275702.1;Name=WP_001275702.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=AC00_RS03475;product=preprotein translocase subunit SecE;protein_id=WP_001275702.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 968 1513 . + . ID=gene-AC00_RS03470;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AC00_RS03470;old_locus_tag=AC00_4548 NZ_JJLU01000132.1 Protein Homology CDS 968 1513 . + 0 ID=cds-WP_001287516.1;Parent=gene-AC00_RS03470;Dbxref=GenBank:WP_001287516.1;Name=WP_001287516.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=AC00_RS03470;product=transcription termination/antitermination protein NusG;protein_id=WP_001287516.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 1672 2100 . + . ID=gene-AC00_RS03465;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AC00_RS03465;old_locus_tag=AC00_4549 NZ_JJLU01000132.1 Protein Homology CDS 1672 2100 . + 0 ID=cds-WP_001085926.1;Parent=gene-AC00_RS03465;Dbxref=GenBank:WP_001085926.1;Name=WP_001085926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=AC00_RS03465;product=50S ribosomal protein L11;protein_id=WP_001085926.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 2104 2808 . + . ID=gene-AC00_RS03460;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AC00_RS03460;old_locus_tag=AC00_4550 NZ_JJLU01000132.1 Protein Homology CDS 2104 2808 . + 0 ID=cds-WP_001096684.1;Parent=gene-AC00_RS03460;Dbxref=GenBank:WP_001096684.1;Name=WP_001096684.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=AC00_RS03460;product=50S ribosomal protein L1;protein_id=WP_001096684.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 3100 3597 . + . ID=gene-AC00_RS03455;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AC00_RS03455;old_locus_tag=AC00_4551 NZ_JJLU01000132.1 Protein Homology CDS 3100 3597 . + 0 ID=cds-WP_001207201.1;Parent=gene-AC00_RS03455;Dbxref=GenBank:WP_001207201.1;Name=WP_001207201.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=AC00_RS03455;product=50S ribosomal protein L10;protein_id=WP_001207201.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 3664 4029 . + . ID=gene-AC00_RS03450;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AC00_RS03450;old_locus_tag=AC00_4552 NZ_JJLU01000132.1 Protein Homology CDS 3664 4029 . + 0 ID=cds-WP_000028878.1;Parent=gene-AC00_RS03450;Dbxref=GenBank:WP_000028878.1;Name=WP_000028878.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=AC00_RS03450;product=50S ribosomal protein L7/L12;protein_id=WP_000028878.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 4349 8377 . + . ID=gene-AC00_RS03445;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AC00_RS03445;old_locus_tag=AC00_4553 NZ_JJLU01000132.1 Protein Homology CDS 4349 8377 . + 0 ID=cds-WP_000263098.1;Parent=gene-AC00_RS03445;Dbxref=GenBank:WP_000263098.1;Name=WP_000263098.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=AC00_RS03445;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_000263098.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 8454 12677 . + . ID=gene-AC00_RS03440;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AC00_RS03440;old_locus_tag=AC00_4554 NZ_JJLU01000132.1 Protein Homology CDS 8454 12677 . + 0 ID=cds-WP_000653944.1;Parent=gene-AC00_RS03440;Dbxref=GenBank:WP_000653944.1;Name=WP_000653944.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312938.1;locus_tag=AC00_RS03440;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_000653944.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 12890 13429 . + . ID=gene-AC00_RS03435;Name=yjaZ;gbkey=Gene;gene=yjaZ;gene_biotype=protein_coding;locus_tag=AC00_RS03435;old_locus_tag=AC00_4555 NZ_JJLU01000132.1 Protein Homology CDS 12890 13429 . + 0 ID=cds-WP_001306870.1;Parent=gene-AC00_RS03435;Dbxref=GenBank:WP_001306870.1;Name=WP_001306870.1;gbkey=CDS;gene=yjaZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418416.1;locus_tag=AC00_RS03435;product=heat-shock protein C;protein_id=WP_001306870.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 13839 14972 . - . ID=gene-AC00_RS03430;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=AC00_RS03430;old_locus_tag=AC00_4557 NZ_JJLU01000132.1 Protein Homology CDS 13839 14972 . - 0 ID=cds-WP_001544260.1;Parent=gene-AC00_RS03430;Dbxref=GenBank:WP_001544260.1;Name=WP_001544260.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000847471.1;locus_tag=AC00_RS03430;product=2-iminoacetate synthase ThiH;protein_id=WP_001544260.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 14969 15739 . - . ID=gene-AC00_RS03425;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=AC00_RS03425;old_locus_tag=AC00_4558 NZ_JJLU01000132.1 Protein Homology CDS 14969 15739 . - 0 ID=cds-WP_001544261.1;Parent=gene-AC00_RS03425;Dbxref=GenBank:WP_001544261.1;Name=WP_001544261.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312941.2;locus_tag=AC00_RS03425;product=thiazole synthase;protein_id=WP_001544261.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 15741 15941 . - . ID=gene-AC00_RS03420;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=AC00_RS03420;old_locus_tag=AC00_4559 NZ_JJLU01000132.1 Protein Homology CDS 15741 15941 . - 0 ID=cds-WP_001166230.1;Parent=gene-AC00_RS03420;Dbxref=GenBank:WP_001166230.1;Name=WP_001166230.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026279.1;locus_tag=AC00_RS03420;product=sulfur carrier protein ThiS;protein_id=WP_001166230.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 15925 16680 . - . ID=gene-AC00_RS03415;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=AC00_RS03415;old_locus_tag=AC00_4560 NZ_JJLU01000132.1 Protein Homology CDS 15925 16680 . - 0 ID=cds-WP_000999737.1;Parent=gene-AC00_RS03415;Dbxref=GenBank:WP_000999737.1;Name=WP_000999737.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418420.4;locus_tag=AC00_RS03415;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_000999737.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 16673 17308 . - . ID=gene-AC00_RS03410;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=AC00_RS03410;old_locus_tag=AC00_4561 NZ_JJLU01000132.1 Protein Homology CDS 16673 17308 . - 0 ID=cds-WP_000284600.1;Parent=gene-AC00_RS03410;Dbxref=GenBank:WP_000284600.1;Name=WP_000284600.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709787.2;locus_tag=AC00_RS03410;product=thiamine phosphate synthase;protein_id=WP_000284600.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 17308 19203 . - . ID=gene-AC00_RS03405;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=AC00_RS03405;old_locus_tag=AC00_4562 NZ_JJLU01000132.1 Protein Homology CDS 17308 19203 . - 0 ID=cds-WP_032288373.1;Parent=gene-AC00_RS03405;Dbxref=GenBank:WP_032288373.1;Name=WP_032288373.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312944.1;locus_tag=AC00_RS03405;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_032288373.1;transl_table=11 NZ_JJLU01000132.1 cmsearch riboswitch 19284 19384 . - . ID=id-NZ_JJLU01000132.1:19284..19384;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLU01000132.1 RefSeq gene 19437 19913 . - . ID=gene-AC00_RS03400;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=AC00_RS03400;old_locus_tag=AC00_4563 NZ_JJLU01000132.1 Protein Homology CDS 19437 19913 . - 0 ID=cds-WP_000934302.1;Parent=gene-AC00_RS03400;Dbxref=GenBank:WP_000934302.1;Name=WP_000934302.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rsd;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312945.1;locus_tag=AC00_RS03400;product=sigma D regulator;protein_id=WP_000934302.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 20008 20781 . + . ID=gene-AC00_RS03395;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=AC00_RS03395;old_locus_tag=AC00_4564 NZ_JJLU01000132.1 Protein Homology CDS 20008 20781 . + 0 ID=cds-WP_023308554.1;Parent=gene-AC00_RS03395;Dbxref=GenBank:WP_023308554.1;Name=WP_023308554.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312946.1;locus_tag=AC00_RS03395;product=NAD(+) diphosphatase;protein_id=WP_023308554.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 20821 21885 . + . ID=gene-AC00_RS03390;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AC00_RS03390;old_locus_tag=AC00_4565 NZ_JJLU01000132.1 Protein Homology CDS 20821 21885 . + 0 ID=cds-WP_000137657.1;Parent=gene-AC00_RS03390;Dbxref=GenBank:WP_000137657.1;Name=WP_000137657.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418425.1;locus_tag=AC00_RS03390;product=uroporphyrinogen decarboxylase;protein_id=WP_000137657.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 21895 22566 . + . ID=gene-AC00_RS03385;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=AC00_RS03385;old_locus_tag=AC00_4566 NZ_JJLU01000132.1 Protein Homology CDS 21895 22566 . + 0 ID=cds-WP_000362388.1;Parent=gene-AC00_RS03385;Dbxref=GenBank:WP_000362388.1;Name=WP_000362388.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=AC00_RS03385;product=deoxyribonuclease V;protein_id=WP_000362388.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 22609 23199 . + . ID=gene-AC00_RS03380;Name=yjaG;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=AC00_RS03380;old_locus_tag=AC00_4567 NZ_JJLU01000132.1 Protein Homology CDS 22609 23199 . + 0 ID=cds-WP_000940106.1;Parent=gene-AC00_RS03380;Dbxref=GenBank:WP_000940106.1;Name=WP_000940106.1;gbkey=CDS;gene=yjaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418427.1;locus_tag=AC00_RS03380;product=YjaG family protein;protein_id=WP_000940106.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 23386 23658 . + . ID=gene-AC00_RS03375;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=AC00_RS03375;old_locus_tag=AC00_4568 NZ_JJLU01000132.1 Protein Homology CDS 23386 23658 . + 0 ID=cds-WP_001044513.1;Parent=gene-AC00_RS03375;Dbxref=GenBank:WP_001044513.1;Name=WP_001044513.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=AC00_RS03375;product=nucleoid-associated protein HU-alpha;protein_id=WP_001044513.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 23671 24366 . + . ID=gene-AC00_RS03370;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=AC00_RS03370;old_locus_tag=AC00_4569 NZ_JJLU01000132.1 Protein Homology CDS 23671 24366 . + 0 ID=cds-WP_001300651.1;Parent=gene-AC00_RS03370;Dbxref=GenBank:WP_001300651.1;Name=WP_001300651.1;gbkey=CDS;gene=yjaH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709795.2;locus_tag=AC00_RS03370;product=DUF1481 domain-containing protein;protein_id=WP_001300651.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 24368 24787 . - . ID=gene-AC00_RS03365;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=AC00_RS03365;old_locus_tag=AC00_4570 NZ_JJLU01000132.1 Protein Homology CDS 24368 24787 . - 0 ID=cds-WP_001296714.1;Parent=gene-AC00_RS03365;Dbxref=GenBank:WP_001296714.1;Name=WP_001296714.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312952.2;locus_tag=AC00_RS03365;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_001296714.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 25025 26401 . + . ID=gene-AC00_RS03360;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=AC00_RS03360;old_locus_tag=AC00_4572 NZ_JJLU01000132.1 Protein Homology CDS 25025 26401 . + 0 ID=cds-WP_032281688.1;Parent=gene-AC00_RS03360;Dbxref=GenBank:WP_032281688.1;Name=WP_032281688.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709797.1;locus_tag=AC00_RS03360;product=two-component system sensor histidine kinase ZraS;protein_id=WP_032281688.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 26398 27723 . + . ID=gene-AC00_RS03355;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=AC00_RS03355;old_locus_tag=AC00_4573 NZ_JJLU01000132.1 Protein Homology CDS 26398 27723 . + 0 ID=cds-WP_000148506.1;Parent=gene-AC00_RS03355;Dbxref=GenBank:WP_000148506.1;Name=WP_000148506.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418432.1;locus_tag=AC00_RS03355;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_000148506.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 27720 29009 . - . ID=gene-AC00_RS03350;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=AC00_RS03350;old_locus_tag=AC00_4574 NZ_JJLU01000132.1 Protein Homology CDS 27720 29009 . - 0 ID=cds-WP_032281687.1;Parent=gene-AC00_RS03350;Dbxref=GenBank:WP_032281687.1;Name=WP_032281687.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418433.1;locus_tag=AC00_RS03350;product=phosphoribosylamine--glycine ligase;protein_id=WP_032281687.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 29021 30610 . - . ID=gene-AC00_RS03345;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AC00_RS03345;old_locus_tag=AC00_4575 NZ_JJLU01000132.1 Protein Homology CDS 29021 30610 . - 0 ID=cds-WP_032281686.1;Parent=gene-AC00_RS03345;Dbxref=GenBank:WP_032281686.1;Name=WP_032281686.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=AC00_RS03345;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_032281686.1;transl_table=11 NZ_JJLU01000132.1 RefSeq gene 31227 32218 . + . ID=gene-AC00_RS03340;Name=AC00_RS03340;end_range=32218,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS03340;old_locus_tag=AC00_4577;partial=true NZ_JJLU01000132.1 cmsearch rRNA 31227 32218 . + . ID=rna-AC00_RS03340;Parent=gene-AC00_RS03340;Dbxref=RFAM:RF00177;end_range=32218,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03340;partial=true;product=16S ribosomal RNA NZ_JJLU01000132.1 cmsearch exon 31227 32218 . + . ID=exon-AC00_RS03340-1;Parent=rna-AC00_RS03340;Dbxref=RFAM:RF00177;end_range=32218,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03340;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JJLU01000133.1 1 30117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000133.1 RefSeq region 1 30117 . + . ID=NZ_JJLU01000133.1:1..30117;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000133.1 RefSeq gene 68 2970 . + . ID=gene-AC00_RS03335;Name=AC00_RS03335;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS03335;old_locus_tag=AC00_4578 NZ_JJLU01000133.1 cmsearch rRNA 68 2970 . + . ID=rna-AC00_RS03335;Parent=gene-AC00_RS03335;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03335;product=23S ribosomal RNA NZ_JJLU01000133.1 cmsearch exon 68 2970 . + . ID=exon-AC00_RS03335-1;Parent=rna-AC00_RS03335;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03335;product=23S ribosomal RNA NZ_JJLU01000133.1 RefSeq gene 3065 3180 . + . ID=gene-AC00_RS03330;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS03330;old_locus_tag=AC00_4580 NZ_JJLU01000133.1 cmsearch rRNA 3065 3180 . + . ID=rna-AC00_RS03330;Parent=gene-AC00_RS03330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03330;product=5S ribosomal RNA NZ_JJLU01000133.1 cmsearch exon 3065 3180 . + . ID=exon-AC00_RS03330-1;Parent=rna-AC00_RS03330;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS03330;product=5S ribosomal RNA NZ_JJLU01000133.1 RefSeq gene 3297 3740 . - . ID=gene-AC00_RS03325;Name=AC00_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03325;old_locus_tag=AC00_4581 NZ_JJLU01000133.1 Protein Homology CDS 3297 3740 . - 0 ID=cds-WP_032281975.1;Parent=gene-AC00_RS03325;Dbxref=GenBank:WP_032281975.1;Name=WP_032281975.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312957.1;locus_tag=AC00_RS03325;product=acetyltransferase;protein_id=WP_032281975.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 3897 4826 . + . ID=gene-AC00_RS03320;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=AC00_RS03320;old_locus_tag=AC00_4582 NZ_JJLU01000133.1 Protein Homology CDS 3897 4826 . + 0 ID=cds-WP_032281976.1;Parent=gene-AC00_RS03320;Dbxref=GenBank:WP_032281976.1;Name=WP_032281976.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=AC00_RS03320;product=homoserine O-acetyltransferase MetA;protein_id=WP_032281976.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 5095 6696 . + . ID=gene-AC00_RS03315;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=AC00_RS03315;old_locus_tag=AC00_4583 NZ_JJLU01000133.1 Protein Homology CDS 5095 6696 . + 0 ID=cds-WP_032281977.1;Parent=gene-AC00_RS03315;Dbxref=GenBank:WP_032281977.1;Name=WP_032281977.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418438.1;locus_tag=AC00_RS03315;product=malate synthase A;protein_id=WP_032281977.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 6726 8030 . + . ID=gene-AC00_RS03310;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=AC00_RS03310;old_locus_tag=AC00_4584 NZ_JJLU01000133.1 Protein Homology CDS 6726 8030 . + 0 ID=cds-WP_000857859.1;Parent=gene-AC00_RS03310;Dbxref=GenBank:WP_000857859.1;Name=WP_000857859.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312960.1;locus_tag=AC00_RS03310;product=isocitrate lyase;protein_id=WP_000857859.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 8214 9950 . + . ID=gene-AC00_RS03305;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=AC00_RS03305;old_locus_tag=AC00_4585 NZ_JJLU01000133.1 Protein Homology CDS 8214 9950 . + 0 ID=cds-WP_032281978.1;Parent=gene-AC00_RS03305;Dbxref=GenBank:WP_032281978.1;Name=WP_032281978.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312961.1;locus_tag=AC00_RS03305;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_032281978.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 9919 12105 . - . ID=gene-AC00_RS03300;Name=espL4;gbkey=Gene;gene=espL4;gene_biotype=protein_coding;locus_tag=AC00_RS03300;old_locus_tag=AC00_4586 NZ_JJLU01000133.1 Protein Homology CDS 9919 12105 . - 0 ID=cds-WP_032281979.1;Parent=gene-AC00_RS03300;Dbxref=GenBank:WP_032281979.1;Name=WP_032281979.1;gbkey=CDS;gene=espL4;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312962.1;locus_tag=AC00_RS03300;product=type III secretion system effector EspL4;protein_id=WP_032281979.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 12422 13246 . - . ID=gene-AC00_RS03295;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=AC00_RS03295;old_locus_tag=AC00_4587 NZ_JJLU01000133.1 Protein Homology CDS 12422 13246 . - 0 ID=cds-WP_000226403.1;Parent=gene-AC00_RS03295;Dbxref=GenBank:WP_000226403.1;Name=WP_000226403.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418442.2;locus_tag=AC00_RS03295;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_000226403.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 13446 17129 . + . ID=gene-AC00_RS03290;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=AC00_RS03290;old_locus_tag=AC00_4588 NZ_JJLU01000133.1 Protein Homology CDS 13446 17129 . + 0 ID=cds-WP_000096041.1;Parent=gene-AC00_RS03290;Dbxref=GenBank:WP_000096041.1;Name=WP_000096041.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312964.1;locus_tag=AC00_RS03290;product=methionine synthase;protein_id=WP_000096041.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 17349 18980 . + . ID=gene-AC00_RS03285;Name=AC00_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03285;old_locus_tag=AC00_4589 NZ_JJLU01000133.1 Protein Homology CDS 17349 18980 . + 0 ID=cds-WP_000956830.1;Parent=gene-AC00_RS03285;Dbxref=GenBank:WP_000956830.1;Name=WP_000956830.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=AC00_RS03285;product=Na/Pi cotransporter family protein;protein_id=WP_000956830.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 19070 19759 . - . ID=gene-AC00_RS03280;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=AC00_RS03280;old_locus_tag=AC00_4590 NZ_JJLU01000133.1 Protein Homology CDS 19070 19759 . - 0 ID=cds-WP_000421772.1;Parent=gene-AC00_RS03280;Dbxref=GenBank:WP_000421772.1;Name=WP_000421772.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709805.1;locus_tag=AC00_RS03280;product=dipeptidase PepE;protein_id=WP_000421772.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 20141 21370 . - . ID=gene-AC00_RS03275;Name=sorE;gbkey=Gene;gene=sorE;gene_biotype=protein_coding;locus_tag=AC00_RS03275;old_locus_tag=AC00_4592 NZ_JJLU01000133.1 Protein Homology CDS 20141 21370 . - 0 ID=cds-WP_032281980.1;Parent=gene-AC00_RS03275;Dbxref=GenBank:WP_032281980.1;Name=WP_032281980.1;gbkey=CDS;gene=sorE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312968.1;locus_tag=AC00_RS03275;product=L-sorbose 1-phosphate reductase;protein_id=WP_032281980.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 21422 22246 . - . ID=gene-AC00_RS03270;Name=AC00_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03270;old_locus_tag=AC00_4593 NZ_JJLU01000133.1 Protein Homology CDS 21422 22246 . - 0 ID=cds-WP_000437902.1;Parent=gene-AC00_RS03270;Dbxref=GenBank:WP_000437902.1;Name=WP_000437902.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224537.1;locus_tag=AC00_RS03270;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_000437902.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 22257 23054 . - . ID=gene-AC00_RS03265;Name=AC00_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03265;old_locus_tag=AC00_4594 NZ_JJLU01000133.1 Protein Homology CDS 22257 23054 . - 0 ID=cds-WP_000406317.1;Parent=gene-AC00_RS03265;Dbxref=GenBank:WP_000406317.1;Name=WP_000406317.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224538.1;locus_tag=AC00_RS03265;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_000406317.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 23120 23614 . - . ID=gene-AC00_RS03260;Name=AC00_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03260;old_locus_tag=AC00_4595 NZ_JJLU01000133.1 Protein Homology CDS 23120 23614 . - 0 ID=cds-WP_001027844.1;Parent=gene-AC00_RS03260;Dbxref=GenBank:WP_001027844.1;Name=WP_001027844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709809.1;locus_tag=AC00_RS03260;product=PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB;protein_id=WP_001027844.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 23614 24021 . - . ID=gene-AC00_RS03255;Name=AC00_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03255;old_locus_tag=AC00_4596 NZ_JJLU01000133.1 Protein Homology CDS 23614 24021 . - 0 ID=cds-WP_032281981.1;Parent=gene-AC00_RS03255;Dbxref=GenBank:WP_032281981.1;Name=WP_032281981.1;Ontology_term=GO:0008643,GO:0016773,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313029.1;locus_tag=AC00_RS03255;product=mannose/fructose/sorbose PTS transporter subunit IIA;protein_id=WP_032281981.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 24031 24837 . - . ID=gene-AC00_RS03250;Name=AC00_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03250;old_locus_tag=AC00_4597 NZ_JJLU01000133.1 Protein Homology CDS 24031 24837 . - 0 ID=cds-WP_001195416.1;Parent=gene-AC00_RS03250;Dbxref=GenBank:WP_001195416.1;Name=WP_001195416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313030.1;locus_tag=AC00_RS03250;product=SDR family oxidoreductase;protein_id=WP_001195416.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 24907 25854 . - . ID=gene-AC00_RS03245;Name=AC00_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03245;old_locus_tag=AC00_4598 NZ_JJLU01000133.1 Protein Homology CDS 24907 25854 . - 0 ID=cds-WP_001308198.1;Parent=gene-AC00_RS03245;Dbxref=GenBank:WP_001308198.1;Name=WP_001308198.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709812.2;locus_tag=AC00_RS03245;product=sugar-binding transcriptional regulator;protein_id=WP_001308198.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 26202 27074 . + . ID=gene-AC00_RS03240;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=AC00_RS03240;old_locus_tag=AC00_4599 NZ_JJLU01000133.1 Protein Homology CDS 26202 27074 . + 0 ID=cds-WP_000936361.1;Parent=gene-AC00_RS03240;Dbxref=GenBank:WP_000936361.1;Name=WP_000936361.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313032.1;locus_tag=AC00_RS03240;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_000936361.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 27075 27347 . - . ID=gene-AC00_RS03235;Name=AC00_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03235;old_locus_tag=AC00_4600 NZ_JJLU01000133.1 Protein Homology CDS 27075 27347 . - 0 ID=cds-WP_001207634.1;Parent=gene-AC00_RS03235;Dbxref=GenBank:WP_001207634.1;Name=WP_001207634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418447.1;locus_tag=AC00_RS03235;product=DUF3811 domain-containing protein;protein_id=WP_001207634.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 27875 29002 . + . ID=gene-AC00_RS03230;Name=AC00_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03230;old_locus_tag=AC00_4602 NZ_JJLU01000133.1 Protein Homology CDS 27875 29002 . + 0 ID=cds-WP_021578194.1;Parent=gene-AC00_RS03230;Dbxref=GenBank:WP_021578194.1;Name=WP_021578194.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592028.1;locus_tag=AC00_RS03230;product=slipin family protein;protein_id=WP_021578194.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 29008 29799 . + . ID=gene-AC00_RS03225;Name=AC00_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03225;old_locus_tag=AC00_4603 NZ_JJLU01000133.1 Protein Homology CDS 29008 29799 . + 0 ID=cds-WP_032151409.1;Parent=gene-AC00_RS03225;Dbxref=GenBank:WP_032151409.1;Name=WP_032151409.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001130549.1;locus_tag=AC00_RS03225;product=nucleotidyltransferase domain-containing protein;protein_id=WP_032151409.1;transl_table=11 NZ_JJLU01000133.1 RefSeq gene 29866 30117 . - . ID=gene-AC00_RS03220;Name=AC00_RS03220;end_range=30117,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03220;old_locus_tag=AC00_4604;partial=true NZ_JJLU01000133.1 Protein Homology CDS 29866 30117 . - 0 ID=cds-WP_000306783.1-3;Parent=gene-AC00_RS03220;Dbxref=GenBank:WP_000306783.1;Name=WP_000306783.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=30117,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS03220;partial=true;product=IS1 family transposase;protein_id=WP_000306783.1;transl_table=11 ##sequence-region NZ_JJLU01000134.1 1 20190 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000134.1 RefSeq region 1 20190 . + . ID=NZ_JJLU01000134.1:1..20190;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000134.1 RefSeq gene 1 265 . - . ID=gene-AC00_RS03215;Name=AC00_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03215;old_locus_tag=AC00_4605;partial=true;start_range=.,1 NZ_JJLU01000134.1 Protein Homology CDS 1 265 . - 0 ID=cds-WP_001508402.1-3;Parent=gene-AC00_RS03215;Dbxref=GenBank:WP_001508402.1;Name=WP_001508402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS03215;partial=true;product=IS1-like element transposase;protein_id=WP_001508402.1;start_range=.,1;transl_table=11 NZ_JJLU01000134.1 RefSeq pseudogene 322 1014 . - . ID=gene-AC00_RS03210;Name=AC00_RS03210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS03210;old_locus_tag=AC00_4606;partial=true;pseudo=true;start_range=.,322 NZ_JJLU01000134.1 Protein Homology CDS 322 1014 . - 0 ID=cds-AC00_RS03210;Parent=gene-AC00_RS03210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666873.1;locus_tag=AC00_RS03210;partial=true;product=zeta toxin family protein;pseudo=true;start_range=.,322;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 1159 2508 . - . ID=gene-AC00_RS03205;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=AC00_RS03205;old_locus_tag=AC00_4607 NZ_JJLU01000134.1 Protein Homology CDS 1159 2508 . - 0 ID=cds-WP_001290309.1;Parent=gene-AC00_RS03205;Dbxref=GenBank:WP_001290309.1;Name=WP_001290309.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418448.1;locus_tag=AC00_RS03205;product=lysine-sensitive aspartokinase 3;protein_id=WP_001290309.1;transl_table=11 NZ_JJLU01000134.1 cmsearch riboswitch 2600 2796 . - . ID=id-NZ_JJLU01000134.1:2600..2796;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JJLU01000134.1 RefSeq gene 3033 4682 . + . ID=gene-AC00_RS03200;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AC00_RS03200;old_locus_tag=AC00_4609 NZ_JJLU01000134.1 Protein Homology CDS 3033 4682 . + 0 ID=cds-WP_000789986.1;Parent=gene-AC00_RS03200;Dbxref=GenBank:WP_000789986.1;Name=WP_000789986.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313035.1;locus_tag=AC00_RS03200;product=glucose-6-phosphate isomerase;protein_id=WP_000789986.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 5195 5437 . + . ID=gene-AC00_RS03195;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=AC00_RS03195;old_locus_tag=AC00_4610 NZ_JJLU01000134.1 Protein Homology CDS 5195 5437 . + 0 ID=cds-WP_000757333.1;Parent=gene-AC00_RS03195;Dbxref=GenBank:WP_000757333.1;Name=WP_000757333.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=AC00_RS03195;product=exopolysaccharide production protein YjbE;protein_id=WP_000757333.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 5551 6189 . + . ID=gene-AC00_RS03190;Name=yjbF;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=AC00_RS03190;old_locus_tag=AC00_4611 NZ_JJLU01000134.1 Protein Homology CDS 5551 6189 . + 0 ID=cds-WP_032281982.1;Parent=gene-AC00_RS03190;Dbxref=GenBank:WP_032281982.1;Name=WP_032281982.1;gbkey=CDS;gene=yjbF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418451.4;locus_tag=AC00_RS03190;product=YjbF family lipoprotein;protein_id=WP_032281982.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 6186 6923 . + . ID=gene-AC00_RS03185;Name=yjbG;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=AC00_RS03185;old_locus_tag=AC00_4612 NZ_JJLU01000134.1 Protein Homology CDS 6186 6923 . + 0 ID=cds-WP_032288376.1;Parent=gene-AC00_RS03185;Dbxref=GenBank:WP_032288376.1;Name=WP_032288376.1;gbkey=CDS;gene=yjbG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313038.1;locus_tag=AC00_RS03185;product=capsule biosynthesis GfcC family protein;protein_id=WP_032288376.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 6923 9019 . + . ID=gene-AC00_RS03180;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=AC00_RS03180;old_locus_tag=AC00_4613 NZ_JJLU01000134.1 Protein Homology CDS 6923 9019 . + 0 ID=cds-WP_000745779.1;Parent=gene-AC00_RS03180;Dbxref=GenBank:WP_000745779.1;Name=WP_000745779.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418453.1;locus_tag=AC00_RS03180;product=YjbH domain-containing protein;protein_id=WP_000745779.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 9066 9344 . - . ID=gene-AC00_RS29895;Name=AC00_RS29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29895 NZ_JJLU01000134.1 Protein Homology CDS 9066 9344 . - 0 ID=cds-WP_023637013.1;Parent=gene-AC00_RS29895;Dbxref=GenBank:WP_023637013.1;Name=WP_023637013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165332.1;locus_tag=AC00_RS29895;product=hypothetical protein;protein_id=WP_023637013.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 9614 10024 . + . ID=gene-AC00_RS03170;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=AC00_RS03170;old_locus_tag=AC00_4616 NZ_JJLU01000134.1 Protein Homology CDS 9614 10024 . + 0 ID=cds-WP_000202902.1;Parent=gene-AC00_RS03170;Dbxref=GenBank:WP_000202902.1;Name=WP_000202902.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=AC00_RS03170;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202902.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 10068 11543 . - . ID=gene-AC00_RS03165;Name=xylE;gbkey=Gene;gene=xylE;gene_biotype=protein_coding;locus_tag=AC00_RS03165;old_locus_tag=AC00_4617 NZ_JJLU01000134.1 Protein Homology CDS 10068 11543 . - 0 ID=cds-WP_001097274.1;Parent=gene-AC00_RS03165;Dbxref=GenBank:WP_001097274.1;Name=WP_001097274.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=xylE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313041.1;locus_tag=AC00_RS03165;product=D-xylose transporter XylE;protein_id=WP_001097274.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 11915 12805 . - . ID=gene-AC00_RS03160;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=AC00_RS03160;old_locus_tag=AC00_4618 NZ_JJLU01000134.1 Protein Homology CDS 11915 12805 . - 0 ID=cds-WP_001252058.1;Parent=gene-AC00_RS03160;Dbxref=GenBank:WP_001252058.1;Name=WP_001252058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252048.1;locus_tag=AC00_RS03160;product=maltose ABC transporter permease MalG;protein_id=WP_001252058.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 12820 14364 . - . ID=gene-AC00_RS03155;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=AC00_RS03155;old_locus_tag=AC00_4619 NZ_JJLU01000134.1 Protein Homology CDS 12820 14364 . - 0 ID=cds-WP_032281984.1;Parent=gene-AC00_RS03155;Dbxref=GenBank:WP_032281984.1;Name=WP_032281984.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418457.1;locus_tag=AC00_RS03155;product=maltose ABC transporter permease MalF;protein_id=WP_032281984.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 14518 15708 . - . ID=gene-AC00_RS03150;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=AC00_RS03150;old_locus_tag=AC00_4620 NZ_JJLU01000134.1 Protein Homology CDS 14518 15708 . - 0 ID=cds-WP_000695387.1;Parent=gene-AC00_RS03150;Dbxref=GenBank:WP_000695387.1;Name=WP_000695387.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=AC00_RS03150;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_000695387.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 16073 17188 . + . ID=gene-AC00_RS03145;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=AC00_RS03145;old_locus_tag=AC00_4621 NZ_JJLU01000134.1 Protein Homology CDS 16073 17188 . + 0 ID=cds-WP_000179165.1;Parent=gene-AC00_RS03145;Dbxref=GenBank:WP_000179165.1;Name=WP_000179165.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=AC00_RS03145;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_000179165.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 17260 18600 . + . ID=gene-AC00_RS03140;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;locus_tag=AC00_RS03140;old_locus_tag=AC00_4622 NZ_JJLU01000134.1 Protein Homology CDS 17260 18600 . + 0 ID=cds-WP_021578201.1;Parent=gene-AC00_RS03140;Dbxref=GenBank:WP_021578201.1;Name=WP_021578201.1;gbkey=CDS;gene=lamB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418460.1;locus_tag=AC00_RS03140;product=maltoporin LamB;protein_id=WP_021578201.1;transl_table=11 NZ_JJLU01000134.1 RefSeq gene 18751 19671 . + . ID=gene-AC00_RS03135;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=AC00_RS03135;old_locus_tag=AC00_4623 NZ_JJLU01000134.1 Protein Homology CDS 18751 19671 . + 0 ID=cds-WP_001362083.1;Parent=gene-AC00_RS03135;Dbxref=GenBank:WP_001362083.1;Name=WP_001362083.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313047.1;locus_tag=AC00_RS03135;product=maltose operon protein MalM;protein_id=WP_001362083.1;transl_table=11 NZ_JJLU01000134.1 RefSeq pseudogene 19763 20190 . + . ID=gene-AC00_RS29905;Name=AC00_RS29905;end_range=20190,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29905;partial=true;pseudo=true NZ_JJLU01000134.1 Protein Homology CDS 19763 20190 . + 0 ID=cds-AC00_RS29905;Parent=gene-AC00_RS29905;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=20190,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC00_RS29905;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000135.1 1 25028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000135.1 RefSeq region 1 25028 . + . ID=NZ_JJLU01000135.1:1..25028;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000135.1 RefSeq pseudogene 1 302 . + . ID=gene-AC00_RS03130;Name=AC00_RS03130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS03130;old_locus_tag=AC00_4625;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000135.1 Protein Homology CDS 1 302 . + 2 ID=cds-AC00_RS03130;Parent=gene-AC00_RS03130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014654019.1;locus_tag=AC00_RS03130;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000135.1 RefSeq pseudogene 318 629 . + . ID=gene-AC00_RS28605;Name=AC00_RS28605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28605;partial=true;pseudo=true;start_range=.,318 NZ_JJLU01000135.1 Protein Homology CDS 318 629 . + 0 ID=cds-AC00_RS28605;Parent=gene-AC00_RS28605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313048.1;locus_tag=AC00_RS28605;partial=true;product=SopA family protein;pseudo=true;start_range=.,318;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 852 1349 . + . ID=gene-AC00_RS03125;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=AC00_RS03125;old_locus_tag=AC00_4626 NZ_JJLU01000135.1 Protein Homology CDS 852 1349 . + 0 ID=cds-WP_001308201.1;Parent=gene-AC00_RS03125;Dbxref=GenBank:WP_001308201.1;Name=WP_001308201.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=AC00_RS03125;product=chorismate lyase;protein_id=WP_001308201.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 1362 2234 . + . ID=gene-AC00_RS03120;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AC00_RS03120;old_locus_tag=AC00_4627 NZ_JJLU01000135.1 Protein Homology CDS 1362 2234 . + 0 ID=cds-WP_000455227.1;Parent=gene-AC00_RS03120;Dbxref=GenBank:WP_000455227.1;Name=WP_000455227.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313050.1;locus_tag=AC00_RS03120;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_000455227.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 2389 4812 . - . ID=gene-AC00_RS03115;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=AC00_RS03115;old_locus_tag=AC00_4628 NZ_JJLU01000135.1 Protein Homology CDS 2389 4812 . - 0 ID=cds-WP_001385068.1;Parent=gene-AC00_RS03115;Dbxref=GenBank:WP_001385068.1;Name=WP_001385068.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418465.4;locus_tag=AC00_RS03115;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_001385068.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 4983 5351 . + . ID=gene-AC00_RS03110;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=AC00_RS03110;old_locus_tag=AC00_4629 NZ_JJLU01000135.1 Protein Homology CDS 4983 5351 . + 0 ID=cds-WP_000002907.1;Parent=gene-AC00_RS03110;Dbxref=GenBank:WP_000002907.1;Name=WP_000002907.1;gbkey=CDS;gene=dgkA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313052.1;locus_tag=AC00_RS03110;product=diacylglycerol kinase;protein_id=WP_000002907.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 5461 6069 . + . ID=gene-AC00_RS03105;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=AC00_RS03105;old_locus_tag=AC00_4630 NZ_JJLU01000135.1 Protein Homology CDS 5461 6069 . + 0 ID=cds-WP_000646078.1;Parent=gene-AC00_RS03105;Dbxref=GenBank:WP_000646078.1;Name=WP_000646078.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=AC00_RS03105;product=transcriptional repressor LexA;protein_id=WP_000646078.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 6142 7467 . + . ID=gene-AC00_RS03100;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=AC00_RS03100;old_locus_tag=AC00_4631 NZ_JJLU01000135.1 Protein Homology CDS 6142 7467 . + 0 ID=cds-WP_032281988.1;Parent=gene-AC00_RS03100;Dbxref=GenBank:WP_032281988.1;Name=WP_032281988.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313054.4;locus_tag=AC00_RS03100;product=MATE family efflux transporter DinF;protein_id=WP_032281988.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 7583 7792 . + . ID=gene-AC00_RS03095;Name=yjbJ;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=AC00_RS03095;old_locus_tag=AC00_4632 NZ_JJLU01000135.1 Protein Homology CDS 7583 7792 . + 0 ID=cds-WP_001030593.1;Parent=gene-AC00_RS03095;Dbxref=GenBank:WP_001030593.1;Name=WP_001030593.1;gbkey=CDS;gene=yjbJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313055.1;locus_tag=AC00_RS03095;product=CsbD family protein;protein_id=WP_001030593.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 7834 8349 . - . ID=gene-AC00_RS03090;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=AC00_RS03090;old_locus_tag=AC00_4633 NZ_JJLU01000135.1 Protein Homology CDS 7834 8349 . - 0 ID=cds-WP_000416263.1;Parent=gene-AC00_RS03090;Dbxref=GenBank:WP_000416263.1;Name=WP_000416263.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418470.4;locus_tag=AC00_RS03090;product=zinc uptake transcriptional repressor Zur;protein_id=WP_000416263.1;transl_table=11 NZ_JJLU01000135.1 RefSeq pseudogene 8668 9691 . + . ID=gene-AC00_RS03085;Name=AC00_RS03085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS03085;old_locus_tag=AC00_4634;pseudo=true NZ_JJLU01000135.1 Protein Homology CDS 8668 9691 . + 0 ID=cds-AC00_RS03085;Parent=gene-AC00_RS03085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_105478490.1;locus_tag=AC00_RS03085;product=DUF2713 family protein;pseudo=true;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 10052 11089 . + . ID=gene-AC00_RS03080;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AC00_RS03080;old_locus_tag=AC00_4635 NZ_JJLU01000135.1 Protein Homology CDS 10052 11089 . + 0 ID=cds-WP_001362079.1;Parent=gene-AC00_RS03080;Dbxref=GenBank:WP_001362079.1;Name=WP_001362079.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313058.1;locus_tag=AC00_RS03080;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_001362079.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 11223 11465 . + . ID=gene-AC00_RS03075;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=AC00_RS03075;old_locus_tag=AC00_4636 NZ_JJLU01000135.1 Protein Homology CDS 11223 11465 . + 0 ID=cds-WP_000891404.1;Parent=gene-AC00_RS03075;Dbxref=GenBank:WP_000891404.1;Name=WP_000891404.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313059.2;locus_tag=AC00_RS03075;product=envelope stress response protein PspG;protein_id=WP_000891404.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 11631 12614 . - . ID=gene-AC00_RS03070;Name=qorA;gbkey=Gene;gene=qorA;gene_biotype=protein_coding;locus_tag=AC00_RS03070;old_locus_tag=AC00_4637 NZ_JJLU01000135.1 Protein Homology CDS 11631 12614 . - 0 ID=cds-WP_032281990.1;Parent=gene-AC00_RS03070;Dbxref=GenBank:WP_032281990.1;Name=WP_032281990.1;gbkey=CDS;gene=qorA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=AC00_RS03070;product=quinone oxidoreductase;protein_id=WP_032281990.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 12697 14112 . + . ID=gene-AC00_RS03065;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AC00_RS03065;old_locus_tag=AC00_4638 NZ_JJLU01000135.1 Protein Homology CDS 12697 14112 . + 0 ID=cds-WP_000918363.1;Parent=gene-AC00_RS03065;Dbxref=GenBank:WP_000918363.1;Name=WP_000918363.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418476.1;locus_tag=AC00_RS03065;product=replicative DNA helicase;protein_id=WP_000918363.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 14165 15244 . + . ID=gene-AC00_RS03060;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AC00_RS03060;old_locus_tag=AC00_4639 NZ_JJLU01000135.1 Protein Homology CDS 14165 15244 . + 0 ID=cds-WP_032281991.1;Parent=gene-AC00_RS03060;Dbxref=GenBank:WP_032281991.1;Name=WP_032281991.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313062.1;locus_tag=AC00_RS03060;product=alanine racemase;protein_id=WP_032281991.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 15497 16690 . + . ID=gene-AC00_RS03055;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=AC00_RS03055;old_locus_tag=AC00_4640 NZ_JJLU01000135.1 Protein Homology CDS 15497 16690 . + 0 ID=cds-WP_021578208.1;Parent=gene-AC00_RS03055;Dbxref=GenBank:WP_021578208.1;Name=WP_021578208.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313063.1;locus_tag=AC00_RS03055;product=aromatic amino acid transaminase;protein_id=WP_021578208.1;transl_table=11 NZ_JJLU01000135.1 RefSeq pseudogene 17193 17397 . - . ID=gene-AC00_RS31385;Name=AC00_RS31385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31385;pseudo=true NZ_JJLU01000135.1 Protein Homology CDS 17193 17397 . - 0 ID=cds-AC00_RS31385;Parent=gene-AC00_RS31385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165333.1;locus_tag=AC00_RS31385;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000135.1 RefSeq pseudogene 17799 18512 . + . ID=gene-AC00_RS0125910;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=pseudogene;locus_tag=AC00_RS0125910;pseudo=true NZ_JJLU01000135.1 Protein Homology CDS 17799 18512 . + 0 ID=cds-AC00_RS0125910;Parent=gene-AC00_RS0125910;Note=internal stop;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313064.1;locus_tag=AC00_RS0125910;product=acid phosphatase AphA;pseudo=true;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 18623 19039 . + . ID=gene-AC00_RS03045;Name=yjbQ;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=AC00_RS03045;old_locus_tag=AC00_4643 NZ_JJLU01000135.1 Protein Homology CDS 18623 19039 . + 0 ID=cds-WP_000270375.1;Parent=gene-AC00_RS03045;Dbxref=GenBank:WP_000270375.1;Name=WP_000270375.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;gene=yjbQ;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313065.1;locus_tag=AC00_RS03045;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_000270375.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 19043 19399 . + . ID=gene-AC00_RS03040;Name=yjbR;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=AC00_RS03040;old_locus_tag=AC00_4644 NZ_JJLU01000135.1 Protein Homology CDS 19043 19399 . + 0 ID=cds-WP_000155657.1;Parent=gene-AC00_RS03040;Dbxref=GenBank:WP_000155657.1;Name=WP_000155657.1;Ontology_term=GO:0003677;gbkey=CDS;gene=yjbR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313066.1;locus_tag=AC00_RS03040;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_000155657.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 19434 22256 . - . ID=gene-AC00_RS03035;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AC00_RS03035;old_locus_tag=AC00_4645 NZ_JJLU01000135.1 Protein Homology CDS 19434 22256 . - 0 ID=cds-WP_000357740.1;Parent=gene-AC00_RS03035;Dbxref=GenBank:WP_000357740.1;Name=WP_000357740.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418482.1;locus_tag=AC00_RS03035;product=excinuclease ABC subunit UvrA;protein_id=WP_000357740.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 22511 23047 . + . ID=gene-AC00_RS03030;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=AC00_RS03030;old_locus_tag=AC00_4646 NZ_JJLU01000135.1 Protein Homology CDS 22511 23047 . + 0 ID=cds-WP_000168305.1;Parent=gene-AC00_RS03030;Dbxref=GenBank:WP_000168305.1;Name=WP_000168305.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313068.1;locus_tag=AC00_RS03030;product=single-stranded DNA-binding protein SSB1;protein_id=WP_000168305.1;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 23146 23427 . - . ID=gene-AC00_RS03025;Name=yjcB;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=AC00_RS03025;old_locus_tag=AC00_4647 NZ_JJLU01000135.1 Protein Homology CDS 23146 23427 . - 0 ID=cds-WP_001362074.1;Parent=gene-AC00_RS03025;Dbxref=GenBank:WP_001362074.1;Name=WP_001362074.1;gbkey=CDS;gene=yjcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313069.2;locus_tag=AC00_RS03025;product=YjcB family protein;protein_id=WP_001362074.1;transl_table=11 NZ_JJLU01000135.1 RefSeq pseudogene 23856 24698 . + . ID=gene-AC00_RS03020;Name=pdeC;end_range=24698,.;gbkey=Gene;gene=pdeC;gene_biotype=pseudogene;locus_tag=AC00_RS03020;old_locus_tag=AC00_4648;partial=true;pseudo=true NZ_JJLU01000135.1 Protein Homology CDS 23856 24698 . + 0 ID=cds-AC00_RS03020;Parent=gene-AC00_RS03020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=24698,.;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418485.1;locus_tag=AC00_RS03020;partial=true;product=c-di-GMP phosphodiesterase PdeC;pseudo=true;transl_table=11 NZ_JJLU01000135.1 RefSeq gene 24840 25028 . - . ID=gene-AC00_RS03015;Name=AC00_RS03015;end_range=25028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03015;old_locus_tag=AC00_4649;partial=true NZ_JJLU01000135.1 Protein Homology CDS 24840 25028 . - 0 ID=cds-WP_021553538.1;Parent=gene-AC00_RS03015;Dbxref=GenBank:WP_021553538.1;Name=WP_021553538.1;end_range=25028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS03015;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_021553538.1;transl_table=11 ##sequence-region NZ_JJLU01000136.1 1 6064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000136.1 RefSeq region 1 6064 . + . ID=NZ_JJLU01000136.1:1..6064;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000136.1 RefSeq gene 1 295 . - . ID=gene-AC00_RS03010;Name=AC00_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS03010;old_locus_tag=AC00_4650;partial=true;start_range=.,1 NZ_JJLU01000136.1 Protein Homology CDS 1 295 . - 0 ID=cds-WP_000019389.1;Parent=gene-AC00_RS03010;Dbxref=GenBank:WP_000019389.1;Name=WP_000019389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS03010;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_000019389.1;start_range=.,1;transl_table=11 NZ_JJLU01000136.1 RefSeq pseudogene 361 1116 . + . ID=gene-AC00_RS03005;Name=pdeC;gbkey=Gene;gene=pdeC;gene_biotype=pseudogene;locus_tag=AC00_RS03005;old_locus_tag=AC00_4651;partial=true;pseudo=true;start_range=.,361 NZ_JJLU01000136.1 Protein Homology CDS 361 1116 . + 0 ID=cds-AC00_RS03005;Parent=gene-AC00_RS03005;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=pdeC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313070.1;locus_tag=AC00_RS03005;partial=true;product=c-di-GMP phosphodiesterase PdeC;pseudo=true;start_range=.,361;transl_table=11 NZ_JJLU01000136.1 RefSeq gene 1119 1442 . - . ID=gene-AC00_RS03000;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=AC00_RS03000;old_locus_tag=AC00_4652 NZ_JJLU01000136.1 Protein Homology CDS 1119 1442 . - 0 ID=cds-WP_000019358.1;Parent=gene-AC00_RS03000;Dbxref=GenBank:WP_000019358.1;Name=WP_000019358.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313071.1;locus_tag=AC00_RS03000;product=superoxide response transcriptional regulator SoxS;protein_id=WP_000019358.1;transl_table=11 NZ_JJLU01000136.1 RefSeq gene 1528 1992 . + . ID=gene-AC00_RS02995;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=AC00_RS02995;old_locus_tag=AC00_4653 NZ_JJLU01000136.1 Protein Homology CDS 1528 1992 . + 0 ID=cds-WP_000412428.1;Parent=gene-AC00_RS02995;Dbxref=GenBank:WP_000412428.1;Name=WP_000412428.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313072.1;locus_tag=AC00_RS02995;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_000412428.1;transl_table=11 NZ_JJLU01000136.1 RefSeq gene 2539 3888 . + . ID=gene-AC00_RS02990;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=AC00_RS02990;old_locus_tag=AC00_4656 NZ_JJLU01000136.1 Protein Homology CDS 2539 3888 . + 0 ID=cds-WP_000106882.1;Parent=gene-AC00_RS02990;Dbxref=GenBank:WP_000106882.1;Name=WP_000106882.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=AC00_RS02990;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_000106882.1;transl_table=11 NZ_JJLU01000136.1 RefSeq gene 4039 5688 . + . ID=gene-AC00_RS02985;Name=yjcE;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=AC00_RS02985;old_locus_tag=AC00_4657 NZ_JJLU01000136.1 Protein Homology CDS 4039 5688 . + 0 ID=cds-WP_000402207.1;Parent=gene-AC00_RS02985;Dbxref=GenBank:WP_000402207.1;Name=WP_000402207.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;gene=yjcE;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313074.1;locus_tag=AC00_RS02985;product=Na+/H+ antiporter;protein_id=WP_000402207.1;transl_table=11 NZ_JJLU01000136.1 RefSeq gene 5839 6064 . + . ID=gene-AC00_RS28650;Name=AC00_RS28650;end_range=6064,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28650;old_locus_tag=AC00_4658;partial=true NZ_JJLU01000136.1 Protein Homology CDS 5839 6064 . + 0 ID=cds-WP_001482752.1-4;Parent=gene-AC00_RS28650;Dbxref=GenBank:WP_001482752.1;Name=WP_001482752.1;Ontology_term=GO:0006313;end_range=6064,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28650;partial=true;product=IS1 family transposase;protein_id=WP_001482752.1;transl_table=11 ##sequence-region NZ_JJLU01000137.1 1 45751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000137.1 RefSeq region 1 45751 . + . ID=NZ_JJLU01000137.1:1..45751;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000137.1 RefSeq gene 1 235 . + . ID=gene-AC00_RS02980;Name=AC00_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02980;old_locus_tag=AC00_4659;partial=true;start_range=.,1 NZ_JJLU01000137.1 Protein Homology CDS 1 235 . + 1 ID=cds-WP_000313483.1-2;Parent=gene-AC00_RS02980;Dbxref=GenBank:WP_000313483.1;Name=WP_000313483.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS02980;partial=true;product=IS1 family transposase;protein_id=WP_000313483.1;start_range=.,1;transl_table=11 NZ_JJLU01000137.1 RefSeq pseudogene 252 329 . - . ID=gene-AC00_RS31390;Name=AC00_RS31390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31390;partial=true;pseudo=true;start_range=.,252 NZ_JJLU01000137.1 Protein Homology CDS 252 329 . - 0 ID=cds-AC00_RS31390;Parent=gene-AC00_RS31390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418490.1;locus_tag=AC00_RS31390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,252;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 507 2156 . - . ID=gene-AC00_RS02975;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=AC00_RS02975;old_locus_tag=AC00_4660 NZ_JJLU01000137.1 Protein Homology CDS 507 2156 . - 0 ID=cds-WP_000832550.1;Parent=gene-AC00_RS02975;Dbxref=GenBank:WP_000832550.1;Name=WP_000832550.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313076.1;locus_tag=AC00_RS02975;product=cation/acetate symporter ActP;protein_id=WP_000832550.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 2153 2467 . - . ID=gene-AC00_RS02970;Name=yjcH;gbkey=Gene;gene=yjcH;gene_biotype=protein_coding;locus_tag=AC00_RS02970;old_locus_tag=AC00_4661 NZ_JJLU01000137.1 Protein Homology CDS 2153 2467 . - 0 ID=cds-WP_001296646.1;Parent=gene-AC00_RS02970;Dbxref=GenBank:WP_001296646.1;Name=WP_001296646.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yjcH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313077.1;locus_tag=AC00_RS02970;product=DUF485 domain-containing protein;protein_id=WP_001296646.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 2600 4558 . - . ID=gene-AC00_RS02965;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=AC00_RS02965;old_locus_tag=AC00_4662 NZ_JJLU01000137.1 Protein Homology CDS 2600 4558 . - 0 ID=cds-WP_000078209.1;Parent=gene-AC00_RS02965;Dbxref=GenBank:WP_000078209.1;Name=WP_000078209.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=AC00_RS02965;product=acetate--CoA ligase;protein_id=WP_000078209.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 4951 6387 . + . ID=gene-AC00_RS02960;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AC00_RS02960;old_locus_tag=AC00_4663 NZ_JJLU01000137.1 Protein Homology CDS 4951 6387 . + 0 ID=cds-WP_000196875.1;Parent=gene-AC00_RS02960;Dbxref=GenBank:WP_000196875.1;Name=WP_000196875.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313079.1;locus_tag=AC00_RS02960;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_000196875.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 6432 6998 . + . ID=gene-AC00_RS02955;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=AC00_RS02955;old_locus_tag=AC00_4664 NZ_JJLU01000137.1 Protein Homology CDS 6432 6998 . + 0 ID=cds-WP_001296647.1;Parent=gene-AC00_RS02955;Dbxref=GenBank:WP_001296647.1;Name=WP_001296647.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418495.2;locus_tag=AC00_RS02955;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_001296647.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 6995 7666 . + . ID=gene-AC00_RS02950;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=AC00_RS02950;old_locus_tag=AC00_4665 NZ_JJLU01000137.1 Protein Homology CDS 6995 7666 . + 0 ID=cds-WP_000220281.1;Parent=gene-AC00_RS02950;Dbxref=GenBank:WP_000220281.1;Name=WP_000220281.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313081.1;locus_tag=AC00_RS02950;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_000220281.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 7663 8619 . + . ID=gene-AC00_RS02945;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=AC00_RS02945;old_locus_tag=AC00_4666 NZ_JJLU01000137.1 Protein Homology CDS 7663 8619 . + 0 ID=cds-WP_032281997.1;Parent=gene-AC00_RS02945;Dbxref=GenBank:WP_032281997.1;Name=WP_032281997.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418497.1;locus_tag=AC00_RS02945;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_032281997.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 8639 10357 . + . ID=gene-AC00_RS02940;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=AC00_RS02940;old_locus_tag=AC00_4667 NZ_JJLU01000137.1 Protein Homology CDS 8639 10357 . + 0 ID=cds-WP_071999288.1;Parent=gene-AC00_RS02940;Dbxref=GenBank:WP_071999288.1;Name=WP_071999288.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640253.1;locus_tag=AC00_RS02940;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_071999288.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 10350 10733 . + . ID=gene-AC00_RS02935;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=AC00_RS02935;old_locus_tag=AC00_4668 NZ_JJLU01000137.1 Protein Homology CDS 10350 10733 . + 0 ID=cds-WP_032281999.1;Parent=gene-AC00_RS02935;Dbxref=GenBank:WP_032281999.1;Name=WP_032281999.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313084.1;locus_tag=AC00_RS02935;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_032281999.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 10730 11326 . + . ID=gene-AC00_RS02930;Name=nrfG;gbkey=Gene;gene=nrfG;gene_biotype=protein_coding;locus_tag=AC00_RS02930;old_locus_tag=AC00_4669 NZ_JJLU01000137.1 Protein Homology CDS 10730 11326 . + 0 ID=cds-WP_000812895.1;Parent=gene-AC00_RS02930;Dbxref=GenBank:WP_000812895.1;Name=WP_000812895.1;gbkey=CDS;gene=nrfG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709852.1;locus_tag=AC00_RS02930;product=heme lyase NrfEFG subunit NrfG;protein_id=WP_000812895.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 11668 12981 . + . ID=gene-AC00_RS02925;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=AC00_RS02925;old_locus_tag=AC00_4671 NZ_JJLU01000137.1 Protein Homology CDS 11668 12981 . + 0 ID=cds-WP_000789589.1;Parent=gene-AC00_RS02925;Dbxref=GenBank:WP_000789589.1;Name=WP_000789589.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313086.1;locus_tag=AC00_RS02925;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_000789589.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 13171 13860 . - . ID=gene-AC00_RS02920;Name=yjcO;gbkey=Gene;gene=yjcO;gene_biotype=protein_coding;locus_tag=AC00_RS02920;old_locus_tag=AC00_4672 NZ_JJLU01000137.1 Protein Homology CDS 13171 13860 . - 0 ID=cds-WP_000719886.1;Parent=gene-AC00_RS02920;Dbxref=GenBank:WP_000719886.1;Name=WP_000719886.1;gbkey=CDS;gene=yjcO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313087.1;locus_tag=AC00_RS02920;product=Sel1 family TPR-like repeat protein YjcO;protein_id=WP_000719886.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 13954 16101 . - . ID=gene-AC00_RS02915;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=AC00_RS02915;old_locus_tag=AC00_4673 NZ_JJLU01000137.1 Protein Homology CDS 13954 16101 . - 0 ID=cds-WP_001300547.1;Parent=gene-AC00_RS02915;Dbxref=GenBank:WP_001300547.1;Name=WP_001300547.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418503.1;locus_tag=AC00_RS02915;product=formate dehydrogenase subunit alpha;protein_id=WP_001300547.1;transl_except=(pos:complement(15682..15684)%2Caa:Sec);transl_table=11 NZ_JJLU01000137.1 RefSeq gene 16299 17762 . - . ID=gene-AC00_RS02905;Name=mdtP;gbkey=Gene;gene=mdtP;gene_biotype=protein_coding;locus_tag=AC00_RS02905;old_locus_tag=AC00_4676 NZ_JJLU01000137.1 Protein Homology CDS 16299 17762 . - 0 ID=cds-WP_032282000.1;Parent=gene-AC00_RS02905;Dbxref=GenBank:WP_032282000.1;Name=WP_032282000.1;gbkey=CDS;gene=mdtP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313089.1;locus_tag=AC00_RS02905;product=multidrug efflux transporter outer membrane subunit MdtP;protein_id=WP_032282000.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 17759 19810 . - . ID=gene-AC00_RS02900;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=AC00_RS02900;old_locus_tag=AC00_4677 NZ_JJLU01000137.1 Protein Homology CDS 17759 19810 . - 0 ID=cds-WP_032282003.1;Parent=gene-AC00_RS02900;Dbxref=GenBank:WP_032282003.1;Name=WP_032282003.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313090.2;locus_tag=AC00_RS02900;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_032282003.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 19810 20841 . - . ID=gene-AC00_RS02895;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=AC00_RS02895;old_locus_tag=AC00_4678 NZ_JJLU01000137.1 Protein Homology CDS 19810 20841 . - 0 ID=cds-WP_000446378.1;Parent=gene-AC00_RS02895;Dbxref=GenBank:WP_000446378.1;Name=WP_000446378.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418506.1;locus_tag=AC00_RS02895;product=multidrug efflux transporter periplasmic adaptor subunit MdtN;protein_id=WP_000446378.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 20860 21135 . - . ID=gene-AC00_RS02890;Name=ytcA;gbkey=Gene;gene=ytcA;gene_biotype=protein_coding;locus_tag=AC00_RS02890;old_locus_tag=AC00_4679 NZ_JJLU01000137.1 Protein Homology CDS 20860 21135 . - 0 ID=cds-WP_001301712.1;Parent=gene-AC00_RS02890;Dbxref=GenBank:WP_001301712.1;Name=WP_001301712.1;gbkey=CDS;gene=ytcA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313092.1;locus_tag=AC00_RS02890;product=YtcA family lipoprotein;protein_id=WP_001301712.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 21344 23329 . - . ID=gene-AC00_RS02885;Name=yjcS;gbkey=Gene;gene=yjcS;gene_biotype=protein_coding;locus_tag=AC00_RS02885;old_locus_tag=AC00_4680 NZ_JJLU01000137.1 Protein Homology CDS 21344 23329 . - 0 ID=cds-WP_032282004.1;Parent=gene-AC00_RS02885;Dbxref=GenBank:WP_032282004.1;Name=WP_032282004.1;gbkey=CDS;gene=yjcS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418507.2;locus_tag=AC00_RS02885;product=alkyl sulfatase YjcS;protein_id=WP_032282004.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 23620 24327 . + . ID=gene-AC00_RS02880;Name=AC00_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02880;old_locus_tag=AC00_4681 NZ_JJLU01000137.1 Protein Homology CDS 23620 24327 . + 0 ID=cds-WP_000805929.1;Parent=gene-AC00_RS02880;Dbxref=GenBank:WP_000805929.1;Name=WP_000805929.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313094.1;locus_tag=AC00_RS02880;product=response regulator transcription factor;protein_id=WP_000805929.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 24324 25325 . - . ID=gene-AC00_RS02875;Name=AC00_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02875;old_locus_tag=AC00_4682 NZ_JJLU01000137.1 Protein Homology CDS 24324 25325 . - 0 ID=cds-WP_000970597.1;Parent=gene-AC00_RS02875;Dbxref=GenBank:WP_000970597.1;Name=WP_000970597.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0016301,GO:0016773,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313095.1;locus_tag=AC00_RS02875;product=carbohydrate kinase family protein;protein_id=WP_000970597.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 25322 26182 . - . ID=gene-AC00_RS02870;Name=AC00_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02870;old_locus_tag=AC00_4683 NZ_JJLU01000137.1 Protein Homology CDS 25322 26182 . - 0 ID=cds-WP_001128439.1;Parent=gene-AC00_RS02870;Dbxref=GenBank:WP_001128439.1;Name=WP_001128439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313096.1;locus_tag=AC00_RS02870;product=ketose 1%2C6-bisphosphate aldolase;protein_id=WP_001128439.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 26197 26880 . - . ID=gene-AC00_RS02865;Name=AC00_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02865;old_locus_tag=AC00_4684 NZ_JJLU01000137.1 Protein Homology CDS 26197 26880 . - 0 ID=cds-WP_032282005.1;Parent=gene-AC00_RS02865;Dbxref=GenBank:WP_032282005.1;Name=WP_032282005.1;Ontology_term=GO:0016861,GO:0046872;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313097.1;locus_tag=AC00_RS02865;product=D-lyxose/D-mannose family sugar isomerase;protein_id=WP_032282005.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 26935 27876 . - . ID=gene-AC00_RS02860;Name=AC00_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02860;old_locus_tag=AC00_4685 NZ_JJLU01000137.1 Protein Homology CDS 26935 27876 . - 0 ID=cds-WP_001237475.1;Parent=gene-AC00_RS02860;Dbxref=GenBank:WP_001237475.1;Name=WP_001237475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313098.1;locus_tag=AC00_RS02860;product=ABC transporter substrate-binding protein;protein_id=WP_001237475.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 27895 28869 . - . ID=gene-AC00_RS02855;Name=AC00_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02855;old_locus_tag=AC00_4686 NZ_JJLU01000137.1 Protein Homology CDS 27895 28869 . - 0 ID=cds-WP_032282006.1;Parent=gene-AC00_RS02855;Dbxref=GenBank:WP_032282006.1;Name=WP_032282006.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313099.1;locus_tag=AC00_RS02855;product=ABC transporter permease subunit;protein_id=WP_032282006.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 28866 30386 . - . ID=gene-AC00_RS02850;Name=AC00_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02850;old_locus_tag=AC00_4687 NZ_JJLU01000137.1 Protein Homology CDS 28866 30386 . - 0 ID=cds-WP_032282008.1;Parent=gene-AC00_RS02850;Dbxref=GenBank:WP_032282008.1;Name=WP_032282008.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313100.1;locus_tag=AC00_RS02850;product=sugar ABC transporter ATP-binding protein;protein_id=WP_032282008.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 30500 32764 . + . ID=gene-AC00_RS02845;Name=AC00_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02845;old_locus_tag=AC00_4689 NZ_JJLU01000137.1 Protein Homology CDS 30500 32764 . + 0 ID=cds-WP_032282009.1;Parent=gene-AC00_RS02845;Dbxref=GenBank:WP_032282009.1;Name=WP_032282009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940957.1;locus_tag=AC00_RS02845;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_032282009.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 32877 33509 . + . ID=gene-AC00_RS02840;Name=AC00_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02840;old_locus_tag=AC00_4690 NZ_JJLU01000137.1 Protein Homology CDS 32877 33509 . + 0 ID=cds-WP_032282010.1;Parent=gene-AC00_RS02840;Dbxref=GenBank:WP_032282010.1;Name=WP_032282010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000636711.1;locus_tag=AC00_RS02840;product=N-acetyltransferase;protein_id=WP_032282010.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 33578 33907 . + . ID=gene-AC00_RS02835;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=AC00_RS02835;old_locus_tag=AC00_4691 NZ_JJLU01000137.1 Protein Homology CDS 33578 33907 . + 0 ID=cds-WP_032282011.1;Parent=gene-AC00_RS02835;Dbxref=GenBank:WP_032282011.1;Name=WP_032282011.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502671.1;locus_tag=AC00_RS02835;product=DDRRRQL repeat protein YjdP;protein_id=WP_032282011.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 34003 34761 . - . ID=gene-AC00_RS02830;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=AC00_RS02830;old_locus_tag=AC00_4692 NZ_JJLU01000137.1 Protein Homology CDS 34003 34761 . - 0 ID=cds-WP_032282012.1;Parent=gene-AC00_RS02830;Dbxref=GenBank:WP_032282012.1;Name=WP_032282012.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313102.1;locus_tag=AC00_RS02830;product=phosphonate metabolism protein PhnP;protein_id=WP_032282012.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 34763 35197 . - . ID=gene-AC00_RS02825;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=AC00_RS02825;old_locus_tag=AC00_4693 NZ_JJLU01000137.1 Protein Homology CDS 34763 35197 . - 0 ID=cds-WP_001110490.1;Parent=gene-AC00_RS02825;Dbxref=GenBank:WP_001110490.1;Name=WP_001110490.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=AC00_RS02825;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_001110490.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 35184 35741 . - . ID=gene-AC00_RS02820;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=AC00_RS02820;old_locus_tag=AC00_4694 NZ_JJLU01000137.1 Protein Homology CDS 35184 35741 . - 0 ID=cds-WP_000147005.1;Parent=gene-AC00_RS02820;Dbxref=GenBank:WP_000147005.1;Name=WP_000147005.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313104.1;locus_tag=AC00_RS02820;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_000147005.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 35741 36877 . - . ID=gene-AC00_RS02815;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=AC00_RS02815;old_locus_tag=AC00_4695 NZ_JJLU01000137.1 Protein Homology CDS 35741 36877 . - 0 ID=cds-WP_021557445.1;Parent=gene-AC00_RS02815;Dbxref=GenBank:WP_021557445.1;Name=WP_021557445.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=AC00_RS02815;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_021557445.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 36874 37554 . - . ID=gene-AC00_RS02810;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=AC00_RS02810;old_locus_tag=AC00_4696 NZ_JJLU01000137.1 Protein Homology CDS 36874 37554 . - 0 ID=cds-WP_000611425.1;Parent=gene-AC00_RS02810;Dbxref=GenBank:WP_000611425.1;Name=WP_000611425.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313106.1;locus_tag=AC00_RS02810;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_000611425.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 37665 38423 . - . ID=gene-AC00_RS02805;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=AC00_RS02805;old_locus_tag=AC00_4697 NZ_JJLU01000137.1 Protein Homology CDS 37665 38423 . - 0 ID=cds-WP_001398151.1;Parent=gene-AC00_RS02805;Dbxref=GenBank:WP_001398151.1;Name=WP_001398151.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313107.1;locus_tag=AC00_RS02805;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_001398151.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 38420 39265 . - . ID=gene-AC00_RS02800;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=AC00_RS02800;old_locus_tag=AC00_4698 NZ_JJLU01000137.1 Protein Homology CDS 38420 39265 . - 0 ID=cds-WP_032282013.1;Parent=gene-AC00_RS02800;Dbxref=GenBank:WP_032282013.1;Name=WP_032282013.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313108.1;locus_tag=AC00_RS02800;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_032282013.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 39258 40322 . - . ID=gene-AC00_RS02795;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=AC00_RS02795;old_locus_tag=AC00_4699 NZ_JJLU01000137.1 Protein Homology CDS 39258 40322 . - 0 ID=cds-WP_001298870.1;Parent=gene-AC00_RS02795;Dbxref=GenBank:WP_001298870.1;Name=WP_001298870.1;gbkey=CDS;gene=phnI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313109.1;locus_tag=AC00_RS02795;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI;protein_id=WP_001298870.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 40322 40906 . - . ID=gene-AC00_RS02790;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=AC00_RS02790;old_locus_tag=AC00_4700 NZ_JJLU01000137.1 Protein Homology CDS 40322 40906 . - 0 ID=cds-WP_000171586.1;Parent=gene-AC00_RS02790;Dbxref=GenBank:WP_000171586.1;Name=WP_000171586.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313110.1;locus_tag=AC00_RS02790;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_000171586.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 40903 41355 . - . ID=gene-AC00_RS02785;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=AC00_RS02785;old_locus_tag=AC00_4701 NZ_JJLU01000137.1 Protein Homology CDS 40903 41355 . - 0 ID=cds-WP_032282014.1;Parent=gene-AC00_RS02785;Dbxref=GenBank:WP_032282014.1;Name=WP_032282014.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313111.1;locus_tag=AC00_RS02785;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_032282014.1;transl_table=11 NZ_JJLU01000137.1 RefSeq pseudogene 41356 42081 . - . ID=gene-AC00_RS0125915;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=pseudogene;locus_tag=AC00_RS0125915;old_locus_tag=AC00_4703;pseudo=true NZ_JJLU01000137.1 Protein Homology CDS 41356 42081 . - 0 ID=cds-AC00_RS0125915;Parent=gene-AC00_RS0125915;Note=internal stop;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=AC00_RS0125915;product=phosphonate metabolism transcriptional regulator PhnF;pseudo=true;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 42102 42881 . - . ID=gene-AC00_RS02780;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=AC00_RS02780;old_locus_tag=AC00_4704 NZ_JJLU01000137.1 Protein Homology CDS 42102 42881 . - 0 ID=cds-WP_032282051.1;Parent=gene-AC00_RS02780;Dbxref=GenBank:WP_032282051.1;Name=WP_032282051.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=AC00_RS02780;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_032282051.1;transl_table=11 NZ_JJLU01000137.1 RefSeq pseudogene 42987 43972 . - . ID=gene-AC00_RS02775;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=pseudogene;locus_tag=AC00_RS02775;old_locus_tag=AC00_4705;pseudo=true NZ_JJLU01000137.1 Protein Homology CDS 42987 43972 . - 0 ID=cds-AC00_RS02775;Parent=gene-AC00_RS02775;Note=frameshifted;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=AC00_RS02775;product=phosphonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 43997 44785 . - . ID=gene-AC00_RS02770;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=AC00_RS02770;old_locus_tag=AC00_4707 NZ_JJLU01000137.1 Protein Homology CDS 43997 44785 . - 0 ID=cds-WP_032282015.1;Parent=gene-AC00_RS02770;Dbxref=GenBank:WP_032282015.1;Name=WP_032282015.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313115.1;locus_tag=AC00_RS02770;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_032282015.1;transl_table=11 NZ_JJLU01000137.1 RefSeq gene 44918 45361 . - . ID=gene-AC00_RS02765;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=AC00_RS02765;old_locus_tag=AC00_4708 NZ_JJLU01000137.1 Protein Homology CDS 44918 45361 . - 0 ID=cds-WP_001131322.1;Parent=gene-AC00_RS02765;Dbxref=GenBank:WP_001131322.1;Name=WP_001131322.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418531.1;locus_tag=AC00_RS02765;product=VOC family metalloprotein YjdN;protein_id=WP_001131322.1;transl_table=11 ##sequence-region NZ_JJLU01000138.1 1 178249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000138.1 RefSeq region 1 178249 . + . ID=NZ_JJLU01000138.1:1..178249;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000138.1 RefSeq pseudogene 1 348 . + . ID=gene-AC00_RS02760;Name=mhpF;gbkey=Gene;gene=mhpF;gene_biotype=pseudogene;locus_tag=AC00_RS02760;old_locus_tag=AC00_4709;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000138.1 Protein Homology CDS 1 348 . + 0 ID=cds-AC00_RS02760;Parent=gene-AC00_RS02760;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=mhpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308433.1;locus_tag=AC00_RS02760;partial=true;product=acetaldehyde dehydrogenase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 345 1358 . + . ID=gene-AC00_RS02755;Name=mhpE;gbkey=Gene;gene=mhpE;gene_biotype=protein_coding;locus_tag=AC00_RS02755;old_locus_tag=AC00_4710 NZ_JJLU01000138.1 Protein Homology CDS 345 1358 . + 0 ID=cds-WP_001013507.1-2;Parent=gene-AC00_RS02755;Dbxref=GenBank:WP_001013507.1;Name=WP_001013507.1;gbkey=CDS;gene=mhpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414886.1;locus_tag=AC00_RS02755;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_001013507.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 1755 2090 . - . ID=gene-AC00_RS02750;Name=yjdM;gbkey=Gene;gene=yjdM;gene_biotype=protein_coding;locus_tag=AC00_RS02750;old_locus_tag=AC00_4711 NZ_JJLU01000138.1 Protein Homology CDS 1755 2090 . - 0 ID=cds-WP_001300891.1;Parent=gene-AC00_RS02750;Dbxref=GenBank:WP_001300891.1;Name=WP_001300891.1;gbkey=CDS;gene=yjdM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=AC00_RS02750;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_001300891.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 2492 4720 . + . ID=gene-AC00_RS02745;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=AC00_RS02745;old_locus_tag=AC00_4712 NZ_JJLU01000138.1 Protein Homology CDS 2492 4720 . + 0 ID=cds-WP_032282016.1;Parent=gene-AC00_RS02745;Dbxref=GenBank:WP_032282016.1;Name=WP_032282016.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418533.1;locus_tag=AC00_RS02745;product=clamp-binding protein CrfC;protein_id=WP_032282016.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 4717 5595 . + . ID=gene-AC00_RS02740;Name=rdcB;gbkey=Gene;gene=rdcB;gene_biotype=protein_coding;locus_tag=AC00_RS02740;old_locus_tag=AC00_4713 NZ_JJLU01000138.1 Protein Homology CDS 4717 5595 . + 0 ID=cds-WP_032282017.1;Parent=gene-AC00_RS02740;Dbxref=GenBank:WP_032282017.1;Name=WP_032282017.1;gbkey=CDS;gene=rdcB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313119.2;locus_tag=AC00_RS02740;product=YjcZ-like family protein;protein_id=WP_032282017.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 5859 7361 . + . ID=gene-AC00_RS02735;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=AC00_RS02735;old_locus_tag=AC00_4714 NZ_JJLU01000138.1 Protein Homology CDS 5859 7361 . + 0 ID=cds-WP_012311661.1;Parent=gene-AC00_RS02735;Dbxref=GenBank:WP_012311661.1;Name=WP_012311661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313120.1;locus_tag=AC00_RS02735;product=glycine betaine/L-proline transporter ProP;protein_id=WP_012311661.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 7476 7565 . + . ID=gene-AC00_RS0125920;Name=pmrR;gbkey=Gene;gene=pmrR;gene_biotype=protein_coding;locus_tag=AC00_RS0125920 NZ_JJLU01000138.1 Protein Homology CDS 7476 7565 . + 0 ID=cds-WP_000797657.1;Parent=gene-AC00_RS0125920;Dbxref=GenBank:WP_000797657.1;Name=WP_000797657.1;gbkey=CDS;gene=pmrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000797656.1;locus_tag=AC00_RS0125920;product=LpxT activity modulator PmrR;protein_id=WP_000797657.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 7541 8641 . - . ID=gene-AC00_RS02730;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=AC00_RS02730;old_locus_tag=AC00_4715 NZ_JJLU01000138.1 Protein Homology CDS 7541 8641 . - 0 ID=cds-WP_162721658.1;Parent=gene-AC00_RS02730;Dbxref=GenBank:WP_162721658.1;Name=WP_162721658.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709829.1;locus_tag=AC00_RS02730;product=two-component system sensor histidine kinase PmrB;protein_id=WP_162721658.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 8642 9310 . - . ID=gene-AC00_RS02725;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;locus_tag=AC00_RS02725;old_locus_tag=AC00_4716 NZ_JJLU01000138.1 Protein Homology CDS 8642 9310 . - 0 ID=cds-WP_000697915.1;Parent=gene-AC00_RS02725;Dbxref=GenBank:WP_000697915.1;Name=WP_000697915.1;gbkey=CDS;gene=basR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313122.1;locus_tag=AC00_RS02725;product=two-component system response regulator BasR;protein_id=WP_000697915.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 9307 10950 . - . ID=gene-AC00_RS02720;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=AC00_RS02720;old_locus_tag=AC00_4717 NZ_JJLU01000138.1 Protein Homology CDS 9307 10950 . - 0 ID=cds-WP_032282018.1;Parent=gene-AC00_RS02720;Dbxref=GenBank:WP_032282018.1;Name=WP_032282018.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418538.2;locus_tag=AC00_RS02720;product=phosphoethanolamine transferase EptA;protein_id=WP_032282018.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 11054 12391 . - . ID=gene-AC00_RS02715;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=AC00_RS02715;old_locus_tag=AC00_4718 NZ_JJLU01000138.1 Protein Homology CDS 11054 12391 . - 0 ID=cds-WP_000093154.1;Parent=gene-AC00_RS02715;Dbxref=GenBank:WP_000093154.1;Name=WP_000093154.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313124.1;locus_tag=AC00_RS02715;product=arginine/agmatine antiporter;protein_id=WP_000093154.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 12528 13289 . - . ID=gene-AC00_RS02710;Name=adiY;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=AC00_RS02710;old_locus_tag=AC00_4719 NZ_JJLU01000138.1 Protein Homology CDS 12528 13289 . - 0 ID=cds-WP_032282020.1;Parent=gene-AC00_RS02710;Dbxref=GenBank:WP_032282020.1;Name=WP_032282020.1;gbkey=CDS;gene=adiY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313125.1;locus_tag=AC00_RS02710;product=DNA-binding transcriptional activator AdiY;protein_id=WP_032282020.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 13613 15880 . - . ID=gene-AC00_RS02705;Name=adiA;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=AC00_RS02705;old_locus_tag=AC00_4720 NZ_JJLU01000138.1 Protein Homology CDS 13613 15880 . - 0 ID=cds-WP_077757444.1;Parent=gene-AC00_RS02705;Dbxref=GenBank:WP_077757444.1;Name=WP_077757444.1;Ontology_term=GO:0006520,GO:0016831;gbkey=CDS;gene=adiA;go_function=carboxy-lyase activity|0016831||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418541.2;locus_tag=AC00_RS02705;product=arginine decarboxylase;protein_id=WP_077757444.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 16079 16987 . - . ID=gene-AC00_RS02700;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=AC00_RS02700;old_locus_tag=AC00_4721 NZ_JJLU01000138.1 Protein Homology CDS 16079 16987 . - 0 ID=cds-WP_001090758.1;Parent=gene-AC00_RS02700;Dbxref=GenBank:WP_001090758.1;Name=WP_001090758.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418542.1;locus_tag=AC00_RS02700;product=transcriptional regulator MelR;protein_id=WP_001090758.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 17270 18625 . + . ID=gene-AC00_RS02695;Name=melA;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=AC00_RS02695;old_locus_tag=AC00_4722 NZ_JJLU01000138.1 Protein Homology CDS 17270 18625 . + 0 ID=cds-WP_032282024.1;Parent=gene-AC00_RS02695;Dbxref=GenBank:WP_032282024.1;Name=WP_032282024.1;gbkey=CDS;gene=melA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418543.1;locus_tag=AC00_RS02695;product=alpha-galactosidase;protein_id=WP_032282024.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 18728 20149 . + . ID=gene-AC00_RS02690;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=AC00_RS02690;old_locus_tag=AC00_4723 NZ_JJLU01000138.1 Protein Homology CDS 18728 20149 . + 0 ID=cds-WP_000028114.1;Parent=gene-AC00_RS02690;Dbxref=GenBank:WP_000028114.1;Name=WP_000028114.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418544.2;locus_tag=AC00_RS02690;product=melibiose:sodium transporter MelB;protein_id=WP_000028114.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 20288 20917 . - . ID=gene-AC00_RS02685;Name=yjdF;gbkey=Gene;gene=yjdF;gene_biotype=protein_coding;locus_tag=AC00_RS02685;old_locus_tag=AC00_4724 NZ_JJLU01000138.1 Protein Homology CDS 20288 20917 . - 0 ID=cds-WP_028132351.1;Parent=gene-AC00_RS02685;Dbxref=GenBank:WP_028132351.1;Name=WP_028132351.1;gbkey=CDS;gene=yjdF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313130.1;locus_tag=AC00_RS02685;product=DUF2238 domain-containing protein;protein_id=WP_028132351.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 21040 22686 . - . ID=gene-AC00_RS02680;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=AC00_RS02680;old_locus_tag=AC00_4725 NZ_JJLU01000138.1 Protein Homology CDS 21040 22686 . - 0 ID=cds-WP_032288381.1;Parent=gene-AC00_RS02680;Dbxref=GenBank:WP_032288381.1;Name=WP_032288381.1;gbkey=CDS;gene=fumB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418546.1;locus_tag=AC00_RS02680;product=class I fumarate hydratase;protein_id=WP_032288381.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 22764 24104 . - . ID=gene-AC00_RS02675;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=AC00_RS02675;old_locus_tag=AC00_4726 NZ_JJLU01000138.1 Protein Homology CDS 22764 24104 . - 0 ID=cds-WP_000899522.1;Parent=gene-AC00_RS02675;Dbxref=GenBank:WP_000899522.1;Name=WP_000899522.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=AC00_RS02675;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_000899522.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 24675 25394 . - . ID=gene-AC00_RS02670;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=AC00_RS02670;old_locus_tag=AC00_4727 NZ_JJLU01000138.1 Protein Homology CDS 24675 25394 . - 0 ID=cds-WP_000611288.1;Parent=gene-AC00_RS02670;Dbxref=GenBank:WP_000611288.1;Name=WP_000611288.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313133.1;locus_tag=AC00_RS02670;product=two-component system response regulator DcuR;protein_id=WP_000611288.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 25391 27022 . - . ID=gene-AC00_RS02665;Name=dcuS;gbkey=Gene;gene=dcuS;gene_biotype=protein_coding;locus_tag=AC00_RS02665;old_locus_tag=AC00_4728 NZ_JJLU01000138.1 Protein Homology CDS 25391 27022 . - 0 ID=cds-WP_001216477.1;Parent=gene-AC00_RS02665;Dbxref=GenBank:WP_001216477.1;Name=WP_001216477.1;gbkey=CDS;gene=dcuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313134.1;locus_tag=AC00_RS02665;product=sensor histidine kinase;protein_id=WP_001216477.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 27203 27433 . + . ID=gene-AC00_RS02660;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=AC00_RS02660;old_locus_tag=AC00_4730 NZ_JJLU01000138.1 Protein Homology CDS 27203 27433 . + 0 ID=cds-WP_000371704.1;Parent=gene-AC00_RS02660;Dbxref=GenBank:WP_000371704.1;Name=WP_000371704.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=AC00_RS02660;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_000371704.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 27445 27717 . + . ID=gene-AC00_RS02655;Name=yjdJ;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=AC00_RS02655;old_locus_tag=AC00_4731 NZ_JJLU01000138.1 Protein Homology CDS 27445 27717 . + 0 ID=cds-WP_000405647.1;Parent=gene-AC00_RS02655;Dbxref=GenBank:WP_000405647.1;Name=WP_000405647.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjdJ;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313136.1;locus_tag=AC00_RS02655;product=GNAT family N-acetyltransferase;protein_id=WP_000405647.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 27944 28240 . + . ID=gene-AC00_RS02650;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=AC00_RS02650;old_locus_tag=AC00_4732 NZ_JJLU01000138.1 Protein Homology CDS 27944 28240 . + 0 ID=cds-WP_000398619.1;Parent=gene-AC00_RS02650;Dbxref=GenBank:WP_000398619.1;Name=WP_000398619.1;gbkey=CDS;gene=ghoS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313137.1;locus_tag=AC00_RS02650;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_000398619.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 28268 28441 . + . ID=gene-AC00_RS02645;Name=ghoT;gbkey=Gene;gene=ghoT;gene_biotype=protein_coding;locus_tag=AC00_RS02645;old_locus_tag=AC00_4733 NZ_JJLU01000138.1 Protein Homology CDS 28268 28441 . + 0 ID=cds-WP_001173343.1;Parent=gene-AC00_RS02645;Dbxref=GenBank:WP_001173343.1;Name=WP_001173343.1;gbkey=CDS;gene=ghoT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588474.1;locus_tag=AC00_RS02645;product=type V toxin-antitoxin system toxin GhoT;protein_id=WP_001173343.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 28560 30077 . - . ID=gene-AC00_RS02640;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AC00_RS02640;old_locus_tag=AC00_4734 NZ_JJLU01000138.1 Protein Homology CDS 28560 30077 . - 0 ID=cds-WP_001295087.1;Parent=gene-AC00_RS02640;Dbxref=GenBank:WP_001295087.1;Name=WP_001295087.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=AC00_RS02640;product=lysine--tRNA ligase;protein_id=WP_001295087.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 30314 31771 . - . ID=gene-AC00_RS02635;Name=dtpC;gbkey=Gene;gene=dtpC;gene_biotype=protein_coding;locus_tag=AC00_RS02635;old_locus_tag=AC00_4735 NZ_JJLU01000138.1 Protein Homology CDS 30314 31771 . - 0 ID=cds-WP_032282027.1;Parent=gene-AC00_RS02635;Dbxref=GenBank:WP_032282027.1;Name=WP_032282027.1;gbkey=CDS;gene=dtpC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313139.1;locus_tag=AC00_RS02635;product=dipeptide/tripeptide permease DtpC;protein_id=WP_032282027.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 31830 33977 . - . ID=gene-AC00_RS02630;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=AC00_RS02630;old_locus_tag=AC00_4736 NZ_JJLU01000138.1 Protein Homology CDS 31830 33977 . - 0 ID=cds-WP_001295383.1;Parent=gene-AC00_RS02630;Dbxref=GenBank:WP_001295383.1;Name=WP_001295383.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313140.1;locus_tag=AC00_RS02630;product=lysine decarboxylase CadA;protein_id=WP_001295383.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 34057 35391 . - . ID=gene-AC00_RS02625;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=AC00_RS02625;old_locus_tag=AC00_4737 NZ_JJLU01000138.1 Protein Homology CDS 34057 35391 . - 0 ID=cds-WP_000092909.1;Parent=gene-AC00_RS02625;Dbxref=GenBank:WP_000092909.1;Name=WP_000092909.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313141.1;locus_tag=AC00_RS02625;product=cadaverine/lysine antiporter;protein_id=WP_000092909.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 35757 37295 . - . ID=gene-AC00_RS02620;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=AC00_RS02620;old_locus_tag=AC00_4738 NZ_JJLU01000138.1 Protein Homology CDS 35757 37295 . - 0 ID=cds-WP_032282028.1;Parent=gene-AC00_RS02620;Dbxref=GenBank:WP_032282028.1;Name=WP_032282028.1;gbkey=CDS;gene=cadC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313142.1;locus_tag=AC00_RS02620;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_032282028.1;transl_table=11 NZ_JJLU01000138.1 RefSeq pseudogene 37555 37714 . - . ID=gene-AC00_RS31650;Name=AC00_RS31650;end_range=37714,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31650;partial=true;pseudo=true NZ_JJLU01000138.1 Protein Homology CDS 37555 37714 . - 0 ID=cds-AC00_RS31650;Parent=gene-AC00_RS31650;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=37714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218818.1;locus_tag=AC00_RS31650;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 37912 37987 . - . ID=gene-AC00_RS02615;Name=AC00_RS02615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS02615;old_locus_tag=AC00_4739 NZ_JJLU01000138.1 tRNAscan-SE tRNA 37912 37987 . - . ID=rna-AC00_RS02615;Parent=gene-AC00_RS02615;anticodon=(pos:complement(37952..37954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS02615;product=tRNA-Phe NZ_JJLU01000138.1 tRNAscan-SE exon 37912 37987 . - . ID=exon-AC00_RS02615-1;Parent=rna-AC00_RS02615;anticodon=(pos:complement(37952..37954));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS02615;product=tRNA-Phe NZ_JJLU01000138.1 RefSeq gene 38094 38669 . - . ID=gene-AC00_RS02610;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;locus_tag=AC00_RS02610;old_locus_tag=AC00_4740 NZ_JJLU01000138.1 Protein Homology CDS 38094 38669 . - 0 ID=cds-WP_001188520.1;Parent=gene-AC00_RS02610;Dbxref=GenBank:WP_001188520.1;Name=WP_001188520.1;Ontology_term=GO:0003677;gbkey=CDS;gene=dicD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=AC00_RS02610;product=transcriptional regulator;protein_id=WP_001188520.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 38706 40403 . - . ID=gene-AC00_RS02605;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=AC00_RS02605;old_locus_tag=AC00_4741 NZ_JJLU01000138.1 Protein Homology CDS 38706 40403 . - 0 ID=cds-WP_032282029.1;Parent=gene-AC00_RS02605;Dbxref=GenBank:WP_032282029.1;Name=WP_032282029.1;gbkey=CDS;gene=dsbD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418559.1;locus_tag=AC00_RS02605;product=protein-disulfide reductase DsbD;protein_id=WP_032282029.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 40379 40717 . - . ID=gene-AC00_RS02600;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=AC00_RS02600;old_locus_tag=AC00_4742 NZ_JJLU01000138.1 Protein Homology CDS 40379 40717 . - 0 ID=cds-WP_000883400.1;Parent=gene-AC00_RS02600;Dbxref=GenBank:WP_000883400.1;Name=WP_000883400.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313145.1;locus_tag=AC00_RS02600;product=divalent cation tolerance protein CutA;protein_id=WP_000883400.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 40833 42134 . - . ID=gene-AC00_RS02595;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=AC00_RS02595;old_locus_tag=AC00_4743 NZ_JJLU01000138.1 Protein Homology CDS 40833 42134 . - 0 ID=cds-WP_000961959.1;Parent=gene-AC00_RS02595;Dbxref=GenBank:WP_000961959.1;Name=WP_000961959.1;gbkey=CDS;gene=dcuA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313146.1;locus_tag=AC00_RS02595;product=anaerobic C4-dicarboxylate transporter DcuA;protein_id=WP_000961959.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 42252 43688 . - . ID=gene-AC00_RS02590;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AC00_RS02590;old_locus_tag=AC00_4744 NZ_JJLU01000138.1 Protein Homology CDS 42252 43688 . - 0 ID=cds-WP_000069437.1;Parent=gene-AC00_RS02590;Dbxref=GenBank:WP_000069437.1;Name=WP_000069437.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313147.2;locus_tag=AC00_RS02590;product=aspartate ammonia-lyase;protein_id=WP_000069437.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 44025 44501 . + . ID=gene-AC00_RS02585;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=AC00_RS02585;old_locus_tag=AC00_4745 NZ_JJLU01000138.1 Protein Homology CDS 44025 44501 . + 0 ID=cds-WP_001267445.1;Parent=gene-AC00_RS02585;Dbxref=GenBank:WP_001267445.1;Name=WP_001267445.1;Ontology_term=GO:0005886;gbkey=CDS;gene=fxsA;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313148.1;locus_tag=AC00_RS02585;product=FxsA family protein;protein_id=WP_001267445.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 44517 45773 . - . ID=gene-AC00_RS02580;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=AC00_RS02580;old_locus_tag=AC00_4746 NZ_JJLU01000138.1 Protein Homology CDS 44517 45773 . - 0 ID=cds-WP_000015852.1;Parent=gene-AC00_RS02580;Dbxref=GenBank:WP_000015852.1;Name=WP_000015852.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313149.1;locus_tag=AC00_RS02580;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_000015852.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 46049 46342 . + . ID=gene-AC00_RS02575;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=AC00_RS02575;old_locus_tag=AC00_4747 NZ_JJLU01000138.1 Protein Homology CDS 46049 46342 . + 0 ID=cds-WP_001026276.1;Parent=gene-AC00_RS02575;Dbxref=GenBank:WP_001026276.1;Name=WP_001026276.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;gene=groS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=AC00_RS02575;product=co-chaperone GroES;protein_id=WP_001026276.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 46386 48032 . + . ID=gene-AC00_RS02570;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AC00_RS02570;old_locus_tag=AC00_4748 NZ_JJLU01000138.1 Protein Homology CDS 46386 48032 . + 0 ID=cds-WP_000729117.1;Parent=gene-AC00_RS02570;Dbxref=GenBank:WP_000729117.1;Name=WP_000729117.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=AC00_RS02570;product=chaperonin GroEL;protein_id=WP_000729117.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 48170 48523 . + . ID=gene-AC00_RS02565;Name=yjeI;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=AC00_RS02565;old_locus_tag=AC00_4749 NZ_JJLU01000138.1 Protein Homology CDS 48170 48523 . + 0 ID=cds-WP_000558209.1;Parent=gene-AC00_RS02565;Dbxref=GenBank:WP_000558209.1;Name=WP_000558209.1;gbkey=CDS;gene=yjeI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418568.2;locus_tag=AC00_RS02565;product=DUF4156 domain-containing protein;protein_id=WP_000558209.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 48716 49585 . - . ID=gene-AC00_RS02560;Name=yjeJ;gbkey=Gene;gene=yjeJ;gene_biotype=protein_coding;locus_tag=AC00_RS02560;old_locus_tag=AC00_4750 NZ_JJLU01000138.1 Protein Homology CDS 48716 49585 . - 0 ID=cds-WP_032282030.1;Parent=gene-AC00_RS02560;Dbxref=GenBank:WP_032282030.1;Name=WP_032282030.1;gbkey=CDS;gene=yjeJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313153.1;locus_tag=AC00_RS02560;product=YjeJ family protein;protein_id=WP_032282030.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 49820 50848 . - . ID=gene-AC00_RS02555;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=AC00_RS02555;old_locus_tag=AC00_4751 NZ_JJLU01000138.1 Protein Homology CDS 49820 50848 . - 0 ID=cds-WP_032282031.1;Parent=gene-AC00_RS02555;Dbxref=GenBank:WP_032282031.1;Name=WP_032282031.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=AC00_RS02555;product=EF-P beta-lysylation protein EpmB;protein_id=WP_032282031.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 50890 51456 . + . ID=gene-AC00_RS02550;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AC00_RS02550;old_locus_tag=AC00_4752 NZ_JJLU01000138.1 Protein Homology CDS 50890 51456 . + 0 ID=cds-WP_000257278.1;Parent=gene-AC00_RS02550;Dbxref=GenBank:WP_000257278.1;Name=WP_000257278.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=AC00_RS02550;product=elongation factor P;protein_id=WP_000257278.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 51508 51633 . + . ID=gene-AC00_RS02545;Name=ecnA;gbkey=Gene;gene=ecnA;gene_biotype=protein_coding;locus_tag=AC00_RS02545;old_locus_tag=AC00_4753 NZ_JJLU01000138.1 Protein Homology CDS 51508 51633 . + 0 ID=cds-WP_000977757.1;Parent=gene-AC00_RS02545;Dbxref=GenBank:WP_000977757.1;Name=WP_000977757.1;gbkey=CDS;gene=ecnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026283.1;locus_tag=AC00_RS02545;product=lipoprotein antitoxin entericidin A;protein_id=WP_000977757.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 51744 51890 . + . ID=gene-AC00_RS02540;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=AC00_RS02540;old_locus_tag=AC00_4754 NZ_JJLU01000138.1 Protein Homology CDS 51744 51890 . + 0 ID=cds-WP_000239596.1;Parent=gene-AC00_RS02540;Dbxref=GenBank:WP_000239596.1;Name=WP_000239596.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710016.1;locus_tag=AC00_RS02540;product=lipoprotein toxin entericidin B;protein_id=WP_000239596.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 52071 52388 . + . ID=gene-AC00_RS02535;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=AC00_RS02535;old_locus_tag=AC00_4755 NZ_JJLU01000138.1 Protein Homology CDS 52071 52388 . + 0 ID=cds-WP_000118482.1;Parent=gene-AC00_RS02535;Dbxref=GenBank:WP_000118482.1;Name=WP_000118482.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=AC00_RS02535;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_000118482.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 52385 52918 . - . ID=gene-AC00_RS02530;Name=blc;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=AC00_RS02530;old_locus_tag=AC00_4756 NZ_JJLU01000138.1 Protein Homology CDS 52385 52918 . - 0 ID=cds-WP_032282032.1;Parent=gene-AC00_RS02530;Dbxref=GenBank:WP_032282032.1;Name=WP_032282032.1;gbkey=CDS;gene=blc;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313157.1;locus_tag=AC00_RS02530;product=lipocalin Blc;protein_id=WP_032282032.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 53007 54140 . - . ID=gene-AC00_RS02525;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=AC00_RS02525;old_locus_tag=AC00_4757 NZ_JJLU01000138.1 Protein Homology CDS 53007 54140 . - 0 ID=cds-WP_032282033.1;Parent=gene-AC00_RS02525;Dbxref=GenBank:WP_032282033.1;Name=WP_032282033.1;Ontology_term=GO:0008800;gbkey=CDS;gene=ampC;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336292.1;locus_tag=AC00_RS02525;product=BlaEC family class C beta-lactamase;protein_id=WP_032282033.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 54203 54562 . - . ID=gene-AC00_RS02520;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=AC00_RS02520;old_locus_tag=AC00_4758 NZ_JJLU01000138.1 Protein Homology CDS 54203 54562 . - 0 ID=cds-WP_000609663.1;Parent=gene-AC00_RS02520;Dbxref=GenBank:WP_000609663.1;Name=WP_000609663.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=AC00_RS02520;product=fumarate reductase subunit FrdD;protein_id=WP_000609663.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 54573 54968 . - . ID=gene-AC00_RS02515;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=AC00_RS02515;old_locus_tag=AC00_4759 NZ_JJLU01000138.1 Protein Homology CDS 54573 54968 . - 0 ID=cds-WP_000208757.1;Parent=gene-AC00_RS02515;Dbxref=GenBank:WP_000208757.1;Name=WP_000208757.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313160.1;locus_tag=AC00_RS02515;product=fumarate reductase subunit FrdC;protein_id=WP_000208757.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 54979 55713 . - . ID=gene-AC00_RS02510;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=AC00_RS02510;old_locus_tag=AC00_4760 NZ_JJLU01000138.1 Protein Homology CDS 54979 55713 . - 0 ID=cds-WP_000829498.1;Parent=gene-AC00_RS02510;Dbxref=GenBank:WP_000829498.1;Name=WP_000829498.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=AC00_RS02510;product=fumarate reductase iron-sulfur protein;protein_id=WP_000829498.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 55706 57514 . - . ID=gene-AC00_RS02505;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=AC00_RS02505;old_locus_tag=AC00_4761 NZ_JJLU01000138.1 Protein Homology CDS 55706 57514 . - 0 ID=cds-WP_001192973.1;Parent=gene-AC00_RS02505;Dbxref=GenBank:WP_001192973.1;Name=WP_001192973.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418578.1;locus_tag=AC00_RS02505;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_001192973.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 57839 58816 . + . ID=gene-AC00_RS02500;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=AC00_RS02500;old_locus_tag=AC00_4762 NZ_JJLU01000138.1 Protein Homology CDS 57839 58816 . + 0 ID=cds-WP_000004771.1;Parent=gene-AC00_RS02500;Dbxref=GenBank:WP_000004771.1;Name=WP_000004771.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=AC00_RS02500;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_000004771.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 59035 60537 . + . ID=gene-AC00_RS02495;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=AC00_RS02495;old_locus_tag=AC00_4763 NZ_JJLU01000138.1 Protein Homology CDS 59035 60537 . + 0 ID=cds-WP_032282034.1;Parent=gene-AC00_RS02495;Dbxref=GenBank:WP_032282034.1;Name=WP_032282034.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418580.2;locus_tag=AC00_RS02495;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_032282034.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 60688 64011 . - . ID=gene-AC00_RS02490;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=AC00_RS02490;old_locus_tag=AC00_4764 NZ_JJLU01000138.1 Protein Homology CDS 60688 64011 . - 0 ID=cds-WP_001236810.1;Parent=gene-AC00_RS02490;Dbxref=GenBank:WP_001236810.1;Name=WP_001236810.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313165.1;locus_tag=AC00_RS02490;product=miniconductance mechanosensitive channel MscM;protein_id=WP_001236810.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 64033 65001 . - . ID=gene-AC00_RS02485;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AC00_RS02485;old_locus_tag=AC00_4765 NZ_JJLU01000138.1 Protein Homology CDS 64033 65001 . - 0 ID=cds-WP_000934920.1;Parent=gene-AC00_RS02485;Dbxref=GenBank:WP_000934920.1;Name=WP_000934920.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313166.1;locus_tag=AC00_RS02485;product=archaetidylserine decarboxylase;protein_id=WP_000934920.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 65098 66150 . - . ID=gene-AC00_RS02480;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=AC00_RS02480;old_locus_tag=AC00_4766 NZ_JJLU01000138.1 Protein Homology CDS 65098 66150 . - 0 ID=cds-WP_032282035.1;Parent=gene-AC00_RS02480;Dbxref=GenBank:WP_032282035.1;Name=WP_032282035.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=AC00_RS02480;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_032282035.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 66245 66790 . + . ID=gene-AC00_RS02475;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AC00_RS02475;old_locus_tag=AC00_4767 NZ_JJLU01000138.1 Protein Homology CDS 66245 66790 . + 0 ID=cds-WP_001295188.1;Parent=gene-AC00_RS02475;Dbxref=GenBank:WP_001295188.1;Name=WP_001295188.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=AC00_RS02475;product=oligoribonuclease;protein_id=WP_001295188.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 67001 67076 . + . ID=gene-AC00_RS02470;Name=AC00_RS02470;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS02470;old_locus_tag=AC00_4768 NZ_JJLU01000138.1 tRNAscan-SE tRNA 67001 67076 . + . ID=rna-AC00_RS02470;Parent=gene-AC00_RS02470;anticodon=(pos:67034..67036);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS02470;product=tRNA-Gly NZ_JJLU01000138.1 tRNAscan-SE exon 67001 67076 . + . ID=exon-AC00_RS02470-1;Parent=rna-AC00_RS02470;anticodon=(pos:67034..67036);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS02470;product=tRNA-Gly NZ_JJLU01000138.1 RefSeq gene 67113 67188 . + . ID=gene-AC00_RS02465;Name=AC00_RS02465;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS02465;old_locus_tag=AC00_4769 NZ_JJLU01000138.1 tRNAscan-SE tRNA 67113 67188 . + . ID=rna-AC00_RS02465;Parent=gene-AC00_RS02465;anticodon=(pos:67146..67148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS02465;product=tRNA-Gly NZ_JJLU01000138.1 tRNAscan-SE exon 67113 67188 . + . ID=exon-AC00_RS02465-1;Parent=rna-AC00_RS02465;anticodon=(pos:67146..67148);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS02465;product=tRNA-Gly NZ_JJLU01000138.1 RefSeq gene 67422 67475 . + . ID=gene-AC00_RS30620;Name=AC00_RS30620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30620 NZ_JJLU01000138.1 Protein Homology CDS 67422 67475 . + 0 ID=cds-WP_010723271.1;Parent=gene-AC00_RS30620;Dbxref=GenBank:WP_010723271.1;Name=WP_010723271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791261.1;locus_tag=AC00_RS30620;product=hypothetical protein;protein_id=WP_010723271.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 67458 68597 . - . ID=gene-AC00_RS02460;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=AC00_RS02460;old_locus_tag=AC00_4770 NZ_JJLU01000138.1 Protein Homology CDS 67458 68597 . - 0 ID=cds-WP_001294212.1;Parent=gene-AC00_RS02460;Dbxref=GenBank:WP_001294212.1;Name=WP_001294212.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313170.2;locus_tag=AC00_RS02460;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001294212.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 68596 70143 . + . ID=gene-AC00_RS02455;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=AC00_RS02455;old_locus_tag=AC00_4771 NZ_JJLU01000138.1 Protein Homology CDS 68596 70143 . + 0 ID=cds-WP_077757443.1;Parent=gene-AC00_RS02455;Dbxref=GenBank:WP_077757443.1;Name=WP_077757443.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418588.1;locus_tag=AC00_RS02455;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_077757443.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 70115 70576 . + . ID=gene-AC00_RS02450;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AC00_RS02450;old_locus_tag=AC00_4772 NZ_JJLU01000138.1 Protein Homology CDS 70115 70576 . + 0 ID=cds-WP_000981977.1;Parent=gene-AC00_RS02450;Dbxref=GenBank:WP_000981977.1;Name=WP_000981977.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=AC00_RS02450;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_000981977.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 70595 71923 . + . ID=gene-AC00_RS02445;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=AC00_RS02445;old_locus_tag=AC00_4773 NZ_JJLU01000138.1 Protein Homology CDS 70595 71923 . + 0 ID=cds-WP_032282036.1;Parent=gene-AC00_RS02445;Dbxref=GenBank:WP_032282036.1;Name=WP_032282036.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418590.1;locus_tag=AC00_RS02445;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_032282036.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 71933 73780 . + . ID=gene-AC00_RS02440;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=AC00_RS02440;old_locus_tag=AC00_4774 NZ_JJLU01000138.1 Protein Homology CDS 71933 73780 . + 0 ID=cds-WP_032282038.1;Parent=gene-AC00_RS02440;Dbxref=GenBank:WP_032282038.1;Name=WP_032282038.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710035.2;locus_tag=AC00_RS02440;product=DNA mismatch repair endonuclease MutL;protein_id=WP_032282038.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 73773 74723 . + . ID=gene-AC00_RS02435;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AC00_RS02435;old_locus_tag=AC00_4775 NZ_JJLU01000138.1 Protein Homology CDS 73773 74723 . + 0 ID=cds-WP_001280339.1;Parent=gene-AC00_RS02435;Dbxref=GenBank:WP_001280339.1;Name=WP_001280339.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313174.1;locus_tag=AC00_RS02435;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_001280339.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 74809 75117 . + . ID=gene-AC00_RS02430;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AC00_RS02430;old_locus_tag=AC00_4776 NZ_JJLU01000138.1 Protein Homology CDS 74809 75117 . + 0 ID=cds-WP_001051883.1;Parent=gene-AC00_RS02430;Dbxref=GenBank:WP_001051883.1;Name=WP_001051883.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=AC00_RS02430;product=RNA chaperone Hfq;protein_id=WP_001051883.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 75194 76474 . + . ID=gene-AC00_RS02425;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=AC00_RS02425;old_locus_tag=AC00_4777 NZ_JJLU01000138.1 Protein Homology CDS 75194 76474 . + 0 ID=cds-WP_000460360.1;Parent=gene-AC00_RS02425;Dbxref=GenBank:WP_000460360.1;Name=WP_000460360.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=AC00_RS02425;product=ribosome rescue GTPase HflX;protein_id=WP_000460360.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 76560 77819 . + . ID=gene-AC00_RS02420;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AC00_RS02420;old_locus_tag=AC00_4778 NZ_JJLU01000138.1 Protein Homology CDS 76560 77819 . + 0 ID=cds-WP_000312488.1;Parent=gene-AC00_RS02420;Dbxref=GenBank:WP_000312488.1;Name=WP_000312488.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313177.1;locus_tag=AC00_RS02420;product=FtsH protease activity modulator HflK;protein_id=WP_000312488.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 77822 78826 . + . ID=gene-AC00_RS02415;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AC00_RS02415;old_locus_tag=AC00_4779 NZ_JJLU01000138.1 Protein Homology CDS 77822 78826 . + 0 ID=cds-WP_001232412.1;Parent=gene-AC00_RS02415;Dbxref=GenBank:WP_001232412.1;Name=WP_001232412.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=AC00_RS02415;product=protease modulator HflC;protein_id=WP_001232412.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 78908 79105 . + . ID=gene-AC00_RS02410;Name=yjeT;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=AC00_RS02410;old_locus_tag=AC00_4780 NZ_JJLU01000138.1 Protein Homology CDS 78908 79105 . + 0 ID=cds-WP_032282039.1;Parent=gene-AC00_RS02410;Dbxref=GenBank:WP_032282039.1;Name=WP_032282039.1;gbkey=CDS;gene=yjeT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313179.1;locus_tag=AC00_RS02410;product=DUF2065 domain-containing protein;protein_id=WP_032282039.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 79209 80507 . + . ID=gene-AC00_RS02405;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=AC00_RS02405;old_locus_tag=AC00_4781 NZ_JJLU01000138.1 Protein Homology CDS 79209 80507 . + 0 ID=cds-WP_000527955.1;Parent=gene-AC00_RS02405;Dbxref=GenBank:WP_000527955.1;Name=WP_000527955.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=AC00_RS02405;product=adenylosuccinate synthase;protein_id=WP_000527955.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 80712 81137 . + . ID=gene-AC00_RS02400;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=AC00_RS02400;old_locus_tag=AC00_4782 NZ_JJLU01000138.1 Protein Homology CDS 80712 81137 . + 0 ID=cds-WP_001177639.1;Parent=gene-AC00_RS02400;Dbxref=GenBank:WP_001177639.1;Name=WP_001177639.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=AC00_RS02400;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_001177639.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 81176 83617 . + . ID=gene-AC00_RS02395;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AC00_RS02395;old_locus_tag=AC00_4783 NZ_JJLU01000138.1 Protein Homology CDS 81176 83617 . + 0 ID=cds-WP_032282040.1;Parent=gene-AC00_RS02395;Dbxref=GenBank:WP_032282040.1;Name=WP_032282040.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418600.4;locus_tag=AC00_RS02395;product=ribonuclease R;protein_id=WP_032282040.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 83798 84529 . + . ID=gene-AC00_RS02390;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AC00_RS02390;old_locus_tag=AC00_4784 NZ_JJLU01000138.1 Protein Homology CDS 83798 84529 . + 0 ID=cds-WP_001293282.1;Parent=gene-AC00_RS02390;Dbxref=GenBank:WP_001293282.1;Name=WP_001293282.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=AC00_RS02390;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_001293282.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 84656 85057 . + . ID=gene-AC00_RS02385;Name=yjfI;gbkey=Gene;gene=yjfI;gene_biotype=protein_coding;locus_tag=AC00_RS02385;old_locus_tag=AC00_4785 NZ_JJLU01000138.1 Protein Homology CDS 84656 85057 . + 0 ID=cds-WP_000220132.1;Parent=gene-AC00_RS02385;Dbxref=GenBank:WP_000220132.1;Name=WP_000220132.1;gbkey=CDS;gene=yjfI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313184.1;locus_tag=AC00_RS02385;product=YjfI family protein;protein_id=WP_000220132.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 85076 85774 . + . ID=gene-AC00_RS02380;Name=yjfJ;gbkey=Gene;gene=yjfJ;gene_biotype=protein_coding;locus_tag=AC00_RS02380;old_locus_tag=AC00_4786 NZ_JJLU01000138.1 Protein Homology CDS 85076 85774 . + 0 ID=cds-WP_000511955.1;Parent=gene-AC00_RS02380;Dbxref=GenBank:WP_000511955.1;Name=WP_000511955.1;gbkey=CDS;gene=yjfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418603.1;locus_tag=AC00_RS02380;product=PspA/IM30 family protein;protein_id=WP_000511955.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 85825 86484 . + . ID=gene-AC00_RS02375;Name=yjfK;gbkey=Gene;gene=yjfK;gene_biotype=protein_coding;locus_tag=AC00_RS02375;old_locus_tag=AC00_4787 NZ_JJLU01000138.1 Protein Homology CDS 85825 86484 . + 0 ID=cds-WP_032282041.1;Parent=gene-AC00_RS02375;Dbxref=GenBank:WP_032282041.1;Name=WP_032282041.1;gbkey=CDS;gene=yjfK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418604.1;locus_tag=AC00_RS02375;product=YjfK family protein;protein_id=WP_032282041.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 86502 86900 . + . ID=gene-AC00_RS0125945;Name=yjfL;gbkey=Gene;gene=yjfL;gene_biotype=protein_coding;locus_tag=AC00_RS0125945 NZ_JJLU01000138.1 Protein Homology CDS 86502 86900 . + 0 ID=cds-WP_000547760.1;Parent=gene-AC00_RS0125945;Dbxref=GenBank:WP_000547760.1;Name=WP_000547760.1;gbkey=CDS;gene=yjfL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313187.1;locus_tag=AC00_RS0125945;product=DUF350 domain-containing protein;protein_id=WP_000547760.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 86910 87548 . + . ID=gene-AC00_RS02370;Name=yjfM;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=AC00_RS02370;old_locus_tag=AC00_4789 NZ_JJLU01000138.1 Protein Homology CDS 86910 87548 . + 0 ID=cds-WP_000101690.1;Parent=gene-AC00_RS02370;Dbxref=GenBank:WP_000101690.1;Name=WP_000101690.1;gbkey=CDS;gene=yjfM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710048.1;locus_tag=AC00_RS02370;product=DUF1190 domain-containing protein;protein_id=WP_000101690.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 87551 88714 . + . ID=gene-AC00_RS02365;Name=yjfC;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=AC00_RS02365;old_locus_tag=AC00_4790 NZ_JJLU01000138.1 Protein Homology CDS 87551 88714 . + 0 ID=cds-WP_032282042.1;Parent=gene-AC00_RS02365;Dbxref=GenBank:WP_032282042.1;Name=WP_032282042.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;gene=yjfC;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313189.1;locus_tag=AC00_RS02365;product=glutathionylspermidine synthase family protein;protein_id=WP_032282042.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 88798 90423 . + . ID=gene-AC00_RS02360;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=AC00_RS02360;old_locus_tag=AC00_4791 NZ_JJLU01000138.1 Protein Homology CDS 88798 90423 . + 0 ID=cds-WP_032288382.1;Parent=gene-AC00_RS02360;Dbxref=GenBank:WP_032288382.1;Name=WP_032288382.1;Ontology_term=GO:0003995;gbkey=CDS;gene=aidB;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418608.6;locus_tag=AC00_RS02360;product=isovaleryl-CoA dehydrogenase;protein_id=WP_032288382.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 90540 90815 . - . ID=gene-AC00_RS02355;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=AC00_RS02355;old_locus_tag=AC00_4792 NZ_JJLU01000138.1 Protein Homology CDS 90540 90815 . - 0 ID=cds-WP_000811566.1;Parent=gene-AC00_RS02355;Dbxref=GenBank:WP_000811566.1;Name=WP_000811566.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418609.4;locus_tag=AC00_RS02355;product=DUF1471 family protease activator YjfN;protein_id=WP_000811566.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 90964 91293 . - . ID=gene-AC00_RS02350;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=AC00_RS02350;old_locus_tag=AC00_4793 NZ_JJLU01000138.1 Protein Homology CDS 90964 91293 . - 0 ID=cds-WP_000254633.1;Parent=gene-AC00_RS02350;Dbxref=GenBank:WP_000254633.1;Name=WP_000254633.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418610.4;locus_tag=AC00_RS02350;product=biofilm peroxide resistance protein BsmA;protein_id=WP_000254633.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 91475 92224 . + . ID=gene-AC00_RS02345;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=AC00_RS02345;old_locus_tag=AC00_4794 NZ_JJLU01000138.1 Protein Homology CDS 91475 92224 . + 0 ID=cds-WP_000569679.1;Parent=gene-AC00_RS02345;Dbxref=GenBank:WP_000569679.1;Name=WP_000569679.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313193.1;locus_tag=AC00_RS02345;product=esterase;protein_id=WP_000569679.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 92221 92976 . - . ID=gene-AC00_RS02340;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=AC00_RS02340;old_locus_tag=AC00_4795 NZ_JJLU01000138.1 Protein Homology CDS 92221 92976 . - 0 ID=cds-WP_000133631.1;Parent=gene-AC00_RS02340;Dbxref=GenBank:WP_000133631.1;Name=WP_000133631.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=AC00_RS02340;product=HTH-type transcriptional regulator UlaR;protein_id=WP_000133631.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 93084 94148 . - . ID=gene-AC00_RS02335;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=AC00_RS02335;old_locus_tag=AC00_4796 NZ_JJLU01000138.1 Protein Homology CDS 93084 94148 . - 0 ID=cds-WP_001301370.1;Parent=gene-AC00_RS02335;Dbxref=GenBank:WP_001301370.1;Name=WP_001301370.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=AC00_RS02335;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_001301370.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 94503 95900 . + . ID=gene-AC00_RS02330;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=AC00_RS02330;old_locus_tag=AC00_4797 NZ_JJLU01000138.1 Protein Homology CDS 94503 95900 . + 0 ID=cds-WP_001351893.1;Parent=gene-AC00_RS02330;Dbxref=GenBank:WP_001351893.1;Name=WP_001351893.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418614.4;locus_tag=AC00_RS02330;product=PTS ascorbate transporter subunit IIC;protein_id=WP_001351893.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 95916 96221 . + . ID=gene-AC00_RS02325;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=AC00_RS02325;old_locus_tag=AC00_4798 NZ_JJLU01000138.1 Protein Homology CDS 95916 96221 . + 0 ID=cds-WP_000218362.1;Parent=gene-AC00_RS02325;Dbxref=GenBank:WP_000218362.1;Name=WP_000218362.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313197.1;locus_tag=AC00_RS02325;product=PTS ascorbate transporter subunit IIB;protein_id=WP_000218362.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 96231 96695 . + . ID=gene-AC00_RS02320;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=AC00_RS02320;old_locus_tag=AC00_4799 NZ_JJLU01000138.1 Protein Homology CDS 96231 96695 . + 0 ID=cds-WP_000776505.1;Parent=gene-AC00_RS02320;Dbxref=GenBank:WP_000776505.1;Name=WP_000776505.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710060.1;locus_tag=AC00_RS02320;product=PTS ascorbate transporter subunit IIA;protein_id=WP_000776505.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 96709 97359 . + . ID=gene-AC00_RS02315;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=AC00_RS02315;old_locus_tag=AC00_4800 NZ_JJLU01000138.1 Protein Homology CDS 96709 97359 . + 0 ID=cds-WP_000056760.1;Parent=gene-AC00_RS02315;Dbxref=GenBank:WP_000056760.1;Name=WP_000056760.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313199.1;locus_tag=AC00_RS02315;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_000056760.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 97369 98223 . + . ID=gene-AC00_RS02310;Name=ulaE;gbkey=Gene;gene=ulaE;gene_biotype=protein_coding;locus_tag=AC00_RS02310;old_locus_tag=AC00_4801 NZ_JJLU01000138.1 Protein Homology CDS 97369 98223 . + 0 ID=cds-WP_000949504.1;Parent=gene-AC00_RS02310;Dbxref=GenBank:WP_000949504.1;Name=WP_000949504.1;gbkey=CDS;gene=ulaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313200.1;locus_tag=AC00_RS02310;product=L-ribulose-5-phosphate 3-epimerase UlaE;protein_id=WP_000949504.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 98223 98909 . + . ID=gene-AC00_RS02305;Name=ulaF;gbkey=Gene;gene=ulaF;gene_biotype=protein_coding;locus_tag=AC00_RS02305;old_locus_tag=AC00_4802 NZ_JJLU01000138.1 Protein Homology CDS 98223 98909 . + 0 ID=cds-WP_001170848.1;Parent=gene-AC00_RS02305;Dbxref=GenBank:WP_001170848.1;Name=WP_001170848.1;gbkey=CDS;gene=ulaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418619.1;locus_tag=AC00_RS02305;product=L-ribulose-5-phosphate 4-epimerase UlaF;protein_id=WP_001170848.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 99038 99313 . - . ID=gene-AC00_RS02300;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=AC00_RS02300;old_locus_tag=AC00_4803 NZ_JJLU01000138.1 Protein Homology CDS 99038 99313 . - 0 ID=cds-WP_000492914.1;Parent=gene-AC00_RS02300;Dbxref=GenBank:WP_000492914.1;Name=WP_000492914.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313202.1;locus_tag=AC00_RS02300;product=DUF1471 family protein YjfY;protein_id=WP_000492914.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 99640 100035 . + . ID=gene-AC00_RS02295;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AC00_RS02295;old_locus_tag=AC00_4804 NZ_JJLU01000138.1 Protein Homology CDS 99640 100035 . + 0 ID=cds-WP_001216676.1;Parent=gene-AC00_RS02295;Dbxref=GenBank:WP_001216676.1;Name=WP_001216676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=AC00_RS02295;product=30S ribosomal protein S6;protein_id=WP_001216676.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 100042 100356 . + . ID=gene-AC00_RS0125955;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=AC00_RS0125955 NZ_JJLU01000138.1 Protein Homology CDS 100042 100356 . + 0 ID=cds-WP_001296681.1;Parent=gene-AC00_RS0125955;Dbxref=GenBank:WP_001296681.1;Name=WP_001296681.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=AC00_RS0125955;product=primosomal replication protein N;protein_id=WP_001296681.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 100361 100588 . + . ID=gene-AC00_RS02290;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AC00_RS02290;old_locus_tag=AC00_4805 NZ_JJLU01000138.1 Protein Homology CDS 100361 100588 . + 0 ID=cds-WP_000135199.1;Parent=gene-AC00_RS02290;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=AC00_RS02290;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 100630 101079 . + . ID=gene-AC00_RS02285;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AC00_RS02285;old_locus_tag=AC00_4806 NZ_JJLU01000138.1 Protein Homology CDS 100630 101079 . + 0 ID=cds-WP_001196062.1;Parent=gene-AC00_RS02285;Dbxref=GenBank:WP_001196062.1;Name=WP_001196062.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=AC00_RS02285;product=50S ribosomal protein L9;protein_id=WP_001196062.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 101181 102458 . - . ID=gene-AC00_RS02280;Name=AC00_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02280;old_locus_tag=AC00_4807 NZ_JJLU01000138.1 Protein Homology CDS 101181 102458 . - 0 ID=cds-WP_001033615.1;Parent=gene-AC00_RS02280;Dbxref=GenBank:WP_001033615.1;Name=WP_001033615.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033602.1;locus_tag=AC00_RS02280;product=MFS transporter;protein_id=WP_001033615.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 102551 104623 . - . ID=gene-AC00_RS02275;Name=AC00_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02275;old_locus_tag=AC00_4808 NZ_JJLU01000138.1 Protein Homology CDS 102551 104623 . - 0 ID=cds-WP_032282044.1;Parent=gene-AC00_RS02275;Dbxref=GenBank:WP_032282044.1;Name=WP_032282044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591423.1;locus_tag=AC00_RS02275;product=FAD-dependent oxidoreductase;protein_id=WP_032282044.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 104620 106161 . - . ID=gene-AC00_RS02270;Name=AC00_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02270;old_locus_tag=AC00_4809 NZ_JJLU01000138.1 Protein Homology CDS 104620 106161 . - 0 ID=cds-WP_032282046.1;Parent=gene-AC00_RS02270;Dbxref=GenBank:WP_032282046.1;Name=WP_032282046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001226973.1;locus_tag=AC00_RS02270;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_032282046.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 106171 106947 . - . ID=gene-AC00_RS02265;Name=AC00_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02265;old_locus_tag=AC00_4810 NZ_JJLU01000138.1 Protein Homology CDS 106171 106947 . - 0 ID=cds-WP_001283543.1;Parent=gene-AC00_RS02265;Dbxref=GenBank:WP_001283543.1;Name=WP_001283543.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283531.1;locus_tag=AC00_RS02265;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_001283543.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 106957 107799 . - . ID=gene-AC00_RS02260;Name=AC00_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02260;old_locus_tag=AC00_4811 NZ_JJLU01000138.1 Protein Homology CDS 106957 107799 . - 0 ID=cds-WP_001205235.1;Parent=gene-AC00_RS02260;Dbxref=GenBank:WP_001205235.1;Name=WP_001205235.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001205218.1;locus_tag=AC00_RS02260;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_001205235.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 107809 108600 . - . ID=gene-AC00_RS02255;Name=AC00_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02255;old_locus_tag=AC00_4812 NZ_JJLU01000138.1 Protein Homology CDS 107809 108600 . - 0 ID=cds-WP_000843384.1;Parent=gene-AC00_RS02255;Dbxref=GenBank:WP_000843384.1;Name=WP_000843384.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709993.2;locus_tag=AC00_RS02255;product=3-ketoacyl-ACP reductase;protein_id=WP_000843384.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 108813 109460 . + . ID=gene-AC00_RS02250;Name=AC00_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS02250;old_locus_tag=AC00_4813 NZ_JJLU01000138.1 Protein Homology CDS 108813 109460 . + 0 ID=cds-WP_001355698.1;Parent=gene-AC00_RS02250;Dbxref=GenBank:WP_001355698.1;Name=WP_001355698.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709992.3;locus_tag=AC00_RS02250;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001355698.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 109444 110082 . - . ID=gene-AC00_RS02245;Name=ytfB;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=AC00_RS02245;old_locus_tag=AC00_4814 NZ_JJLU01000138.1 Protein Homology CDS 109444 110082 . - 0 ID=cds-WP_001565397.1;Parent=gene-AC00_RS02245;Dbxref=GenBank:WP_001565397.1;Name=WP_001565397.1;gbkey=CDS;gene=ytfB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=AC00_RS02245;product=cell division protein YtfB;protein_id=WP_001565397.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 110301 110921 . + . ID=gene-AC00_RS02240;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=AC00_RS02240;old_locus_tag=AC00_4815 NZ_JJLU01000138.1 Protein Homology CDS 110301 110921 . + 0 ID=cds-WP_000211237.1;Parent=gene-AC00_RS02240;Dbxref=GenBank:WP_000211237.1;Name=WP_000211237.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=AC00_RS02240;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_000211237.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 111223 112635 . + . ID=gene-AC00_RS02235;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=AC00_RS02235;old_locus_tag=AC00_4816 NZ_JJLU01000138.1 Protein Homology CDS 111223 112635 . + 0 ID=cds-WP_000228357.1;Parent=gene-AC00_RS02235;Dbxref=GenBank:WP_000228357.1;Name=WP_000228357.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313213.1;locus_tag=AC00_RS02235;product=D-serine/D-alanine/glycine transporter;protein_id=WP_000228357.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 112680 113342 . - . ID=gene-AC00_RS02230;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=AC00_RS02230;old_locus_tag=AC00_4817 NZ_JJLU01000138.1 Protein Homology CDS 112680 113342 . - 0 ID=cds-WP_000331456.1;Parent=gene-AC00_RS02230;Dbxref=GenBank:WP_000331456.1;Name=WP_000331456.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=AC00_RS02230;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_000331456.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 113450 114415 . - . ID=gene-AC00_RS02225;Name=ytfF;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=AC00_RS02225;old_locus_tag=AC00_4818 NZ_JJLU01000138.1 Protein Homology CDS 113450 114415 . - 0 ID=cds-WP_001295194.1;Parent=gene-AC00_RS02225;Dbxref=GenBank:WP_001295194.1;Name=WP_001295194.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ytfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709987.2;locus_tag=AC00_RS02225;product=DMT family transporter;protein_id=WP_001295194.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 114524 115387 . - . ID=gene-AC00_RS02220;Name=qorB;gbkey=Gene;gene=qorB;gene_biotype=protein_coding;locus_tag=AC00_RS02220;old_locus_tag=AC00_4819 NZ_JJLU01000138.1 Protein Homology CDS 114524 115387 . - 0 ID=cds-WP_001328973.1;Parent=gene-AC00_RS02220;Dbxref=GenBank:WP_001328973.1;Name=WP_001328973.1;gbkey=CDS;gene=qorB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001491469.1;locus_tag=AC00_RS02220;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_001328973.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 115476 115856 . + . ID=gene-AC00_RS02215;Name=ytfH;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=AC00_RS02215;old_locus_tag=AC00_4820 NZ_JJLU01000138.1 Protein Homology CDS 115476 115856 . + 0 ID=cds-WP_000084622.1;Parent=gene-AC00_RS02215;Dbxref=GenBank:WP_000084622.1;Name=WP_000084622.1;Ontology_term=GO:0003677;gbkey=CDS;gene=ytfH;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418633.4;locus_tag=AC00_RS02215;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_000084622.1;transl_table=11 NZ_JJLU01000138.1 RefSeq pseudogene 115984 117947 . - . ID=gene-AC00_RS0125960;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=pseudogene;locus_tag=AC00_RS0125960;pseudo=true NZ_JJLU01000138.1 Protein Homology CDS 115984 117947 . - 0 ID=cds-AC00_RS0125960;Parent=gene-AC00_RS0125960;Note=frameshifted;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709984.2;locus_tag=AC00_RS0125960;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;pseudo=true;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 118137 118877 . + . ID=gene-AC00_RS02210;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=AC00_RS02210;old_locus_tag=AC00_4823 NZ_JJLU01000138.1 Protein Homology CDS 118137 118877 . + 0 ID=cds-WP_000886921.1;Parent=gene-AC00_RS02210;Dbxref=GenBank:WP_000886921.1;Name=WP_000886921.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=AC00_RS02210;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_000886921.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 118867 119424 . - . ID=gene-AC00_RS02205;Name=ytfJ;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=AC00_RS02205;old_locus_tag=AC00_4824 NZ_JJLU01000138.1 Protein Homology CDS 118867 119424 . - 0 ID=cds-WP_000175868.1;Parent=gene-AC00_RS02205;Dbxref=GenBank:WP_000175868.1;Name=WP_000175868.1;gbkey=CDS;gene=ytfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001498728.1;locus_tag=AC00_RS02205;product=YtfJ family protein;protein_id=WP_000175868.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 119749 119955 . + . ID=gene-AC00_RS02200;Name=ytfK;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=AC00_RS02200;old_locus_tag=AC00_4825 NZ_JJLU01000138.1 Protein Homology CDS 119749 119955 . + 0 ID=cds-WP_000689228.1;Parent=gene-AC00_RS02200;Dbxref=GenBank:WP_000689228.1;Name=WP_000689228.1;gbkey=CDS;gene=ytfK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=AC00_RS02200;product=DUF1107 domain-containing protein;protein_id=WP_000689228.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 120017 121360 . - . ID=gene-AC00_RS02195;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;locus_tag=AC00_RS02195;old_locus_tag=AC00_4826 NZ_JJLU01000138.1 Protein Homology CDS 120017 121360 . - 0 ID=cds-WP_000935036.1;Parent=gene-AC00_RS02195;Dbxref=GenBank:WP_000935036.1;Name=WP_000935036.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;gene=paeA;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313223.1;locus_tag=AC00_RS02195;product=hemolysin family protein;protein_id=WP_000935036.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 121683 122321 . - . ID=gene-AC00_RS02190;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=AC00_RS02190;old_locus_tag=AC00_4827 NZ_JJLU01000138.1 Protein Homology CDS 121683 122321 . - 0 ID=cds-WP_001295196.1;Parent=gene-AC00_RS02190;Dbxref=GenBank:WP_001295196.1;Name=WP_001295196.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418640.1;locus_tag=AC00_RS02190;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_001295196.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 122527 124260 . + . ID=gene-AC00_RS02180;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=AC00_RS02180;old_locus_tag=AC00_4829 NZ_JJLU01000138.1 Protein Homology CDS 122527 124260 . + 0 ID=cds-WP_001736009.1;Parent=gene-AC00_RS02180;Dbxref=GenBank:WP_001736009.1;Name=WP_001736009.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313225.1;locus_tag=AC00_RS02180;product=autotransporter assembly complex protein TamA;protein_id=WP_001736009.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 124257 128036 . + . ID=gene-AC00_RS02175;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=AC00_RS02175;old_locus_tag=AC00_4830 NZ_JJLU01000138.1 Protein Homology CDS 124257 128036 . + 0 ID=cds-WP_032288383.1;Parent=gene-AC00_RS02175;Dbxref=GenBank:WP_032288383.1;Name=WP_032288383.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313226.1;locus_tag=AC00_RS02175;product=autotransporter assembly complex protein TamB;protein_id=WP_032288383.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 128039 128380 . + . ID=gene-AC00_RS02170;Name=ytfP;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=AC00_RS02170;old_locus_tag=AC00_4831 NZ_JJLU01000138.1 Protein Homology CDS 128039 128380 . + 0 ID=cds-WP_001219160.1;Parent=gene-AC00_RS02170;Dbxref=GenBank:WP_001219160.1;Name=WP_001219160.1;Ontology_term=GO:0061929;gbkey=CDS;gene=ytfP;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313227.1;locus_tag=AC00_RS02170;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_001219160.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 128760 129290 . - . ID=gene-AC00_RS02165;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AC00_RS02165;old_locus_tag=AC00_4832 NZ_JJLU01000138.1 Protein Homology CDS 128760 129290 . - 0 ID=cds-WP_000055072.1;Parent=gene-AC00_RS02165;Dbxref=GenBank:WP_000055072.1;Name=WP_000055072.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=AC00_RS02165;product=inorganic diphosphatase;protein_id=WP_000055072.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 129600 130556 . + . ID=gene-AC00_RS02160;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=AC00_RS02160;old_locus_tag=AC00_4833 NZ_JJLU01000138.1 Protein Homology CDS 129600 130556 . + 0 ID=cds-WP_000265933.1;Parent=gene-AC00_RS02160;Dbxref=GenBank:WP_000265933.1;Name=WP_000265933.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=AC00_RS02160;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_000265933.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 130696 132198 . + . ID=gene-AC00_RS02155;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=AC00_RS02155;old_locus_tag=AC00_4834 NZ_JJLU01000138.1 Protein Homology CDS 130696 132198 . + 0 ID=cds-WP_000210557.1;Parent=gene-AC00_RS02155;Dbxref=GenBank:WP_000210557.1;Name=WP_000210557.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026286.1;locus_tag=AC00_RS02155;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_000210557.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 132212 133234 . + . ID=gene-AC00_RS02150;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=AC00_RS02150;old_locus_tag=AC00_4835 NZ_JJLU01000138.1 Protein Homology CDS 132212 133234 . + 0 ID=cds-WP_001297255.1;Parent=gene-AC00_RS02150;Dbxref=GenBank:WP_001297255.1;Name=WP_001297255.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313234.2;locus_tag=AC00_RS02150;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_001297255.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 133221 134216 . + . ID=gene-AC00_RS02145;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=AC00_RS02145;old_locus_tag=AC00_4836 NZ_JJLU01000138.1 Protein Homology CDS 133221 134216 . + 0 ID=cds-WP_000596015.1;Parent=gene-AC00_RS02145;Dbxref=GenBank:WP_000596015.1;Name=WP_000596015.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418652.2;locus_tag=AC00_RS02145;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_000596015.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 134249 135247 . - . ID=gene-AC00_RS02140;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=AC00_RS02140;old_locus_tag=AC00_4837 NZ_JJLU01000138.1 Protein Homology CDS 134249 135247 . - 0 ID=cds-WP_000853753.1;Parent=gene-AC00_RS02140;Dbxref=GenBank:WP_000853753.1;Name=WP_000853753.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=AC00_RS02140;product=class 1 fructose-bisphosphatase;protein_id=WP_000853753.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 135423 136796 . + . ID=gene-AC00_RS02135;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AC00_RS02135;old_locus_tag=AC00_4839 NZ_JJLU01000138.1 Protein Homology CDS 135423 136796 . + 0 ID=cds-WP_001219792.1;Parent=gene-AC00_RS02135;Dbxref=GenBank:WP_001219792.1;Name=WP_001219792.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313237.1;locus_tag=AC00_RS02135;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_001219792.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 136952 137503 . - . ID=gene-AC00_RS02130;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=AC00_RS02130;old_locus_tag=AC00_4840 NZ_JJLU01000138.1 Protein Homology CDS 136952 137503 . - 0 ID=cds-WP_000166270.1;Parent=gene-AC00_RS02130;Dbxref=GenBank:WP_000166270.1;Name=WP_000166270.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313238.1;locus_tag=AC00_RS02130;product=ribosome biogenesis factor YjgA;protein_id=WP_000166270.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 137598 138950 . + . ID=gene-AC00_RS02125;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=AC00_RS02125;old_locus_tag=AC00_4841 NZ_JJLU01000138.1 Protein Homology CDS 137598 138950 . + 0 ID=cds-WP_001162160.1;Parent=gene-AC00_RS02125;Dbxref=GenBank:WP_001162160.1;Name=WP_001162160.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313239.1;locus_tag=AC00_RS02125;product=metalloprotease PmbA;protein_id=WP_001162160.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 139005 139391 . + . ID=gene-AC00_RS02120;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=AC00_RS02120;old_locus_tag=AC00_4842 NZ_JJLU01000138.1 Protein Homology CDS 139005 139391 . + 0 ID=cds-WP_001232246.1;Parent=gene-AC00_RS02120;Dbxref=GenBank:WP_001232246.1;Name=WP_001232246.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313240.2;locus_tag=AC00_RS02120;product=cytochrome b562;protein_id=WP_001232246.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 139436 139900 . - . ID=gene-AC00_RS02115;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=AC00_RS02115;old_locus_tag=AC00_4843 NZ_JJLU01000138.1 Protein Homology CDS 139436 139900 . - 0 ID=cds-WP_001106233.1;Parent=gene-AC00_RS02115;Dbxref=GenBank:WP_001106233.1;Name=WP_001106233.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=AC00_RS02115;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_001106233.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 140060 142198 . - . ID=gene-AC00_RS02110;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=AC00_RS02110;old_locus_tag=AC00_4845 NZ_JJLU01000138.1 Protein Homology CDS 140060 142198 . - 0 ID=cds-WP_000187791.1;Parent=gene-AC00_RS02110;Dbxref=GenBank:WP_000187791.1;Name=WP_000187791.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418659.1;locus_tag=AC00_RS02110;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_000187791.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 142592 144247 . - . ID=gene-AC00_RS02105;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=AC00_RS02105;old_locus_tag=AC00_4848 NZ_JJLU01000138.1 Protein Homology CDS 142592 144247 . - 0 ID=cds-WP_001329675.1;Parent=gene-AC00_RS02105;Dbxref=GenBank:WP_001329675.1;Name=WP_001329675.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313243.1;locus_tag=AC00_RS02105;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_001329675.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 144297 145718 . - . ID=gene-AC00_RS02100;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=AC00_RS02100;old_locus_tag=AC00_4849 NZ_JJLU01000138.1 Protein Homology CDS 144297 145718 . - 0 ID=cds-WP_001299664.1;Parent=gene-AC00_RS02100;Dbxref=GenBank:WP_001299664.1;Name=WP_001299664.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313244.1;locus_tag=AC00_RS02100;product=PTS trehalose transporter subunit IIBC;protein_id=WP_001299664.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 145837 146784 . - . ID=gene-AC00_RS02095;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=AC00_RS02095;old_locus_tag=AC00_4850 NZ_JJLU01000138.1 Protein Homology CDS 145837 146784 . - 0 ID=cds-WP_001181324.1;Parent=gene-AC00_RS02095;Dbxref=GenBank:WP_001181324.1;Name=WP_001181324.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418662.1;locus_tag=AC00_RS02095;product=trehalose operon repressor TreR;protein_id=WP_001181324.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 146969 147022 . + . ID=gene-AC00_RS30625;Name=mgtL;gbkey=Gene;gene=mgtL;gene_biotype=protein_coding;locus_tag=AC00_RS30625 NZ_JJLU01000138.1 Protein Homology CDS 146969 147022 . + 0 ID=cds-WP_001387276.1;Parent=gene-AC00_RS30625;Dbxref=GenBank:WP_001387276.1;Name=WP_001387276.1;gbkey=CDS;gene=mgtL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_003933616.1;locus_tag=AC00_RS30625;product=mgtA regulatory leader peptide MgtL;protein_id=WP_001387276.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 147163 149859 . + . ID=gene-AC00_RS02090;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=AC00_RS02090;old_locus_tag=AC00_4851 NZ_JJLU01000138.1 Protein Homology CDS 147163 149859 . + 0 ID=cds-WP_000471866.1;Parent=gene-AC00_RS02090;Dbxref=GenBank:WP_000471866.1;Name=WP_000471866.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313246.1;locus_tag=AC00_RS02090;product=magnesium-translocating P-type ATPase;protein_id=WP_000471866.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 150065 150451 . - . ID=gene-AC00_RS02085;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=AC00_RS02085;old_locus_tag=AC00_4852 NZ_JJLU01000138.1 Protein Homology CDS 150065 150451 . - 0 ID=cds-WP_000047539.1;Parent=gene-AC00_RS02085;Dbxref=GenBank:WP_000047539.1;Name=WP_000047539.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=AC00_RS02085;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_000047539.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 150524 150985 . - . ID=gene-AC00_RS02080;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=AC00_RS02080;old_locus_tag=AC00_4853 NZ_JJLU01000138.1 Protein Homology CDS 150524 150985 . - 0 ID=cds-WP_000148581.1;Parent=gene-AC00_RS02080;Dbxref=GenBank:WP_000148581.1;Name=WP_000148581.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=AC00_RS02080;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_000148581.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 150998 151933 . - . ID=gene-AC00_RS02075;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AC00_RS02075;old_locus_tag=AC00_4854 NZ_JJLU01000138.1 Protein Homology CDS 150998 151933 . - 0 ID=cds-WP_000013046.1;Parent=gene-AC00_RS02075;Dbxref=GenBank:WP_000013046.1;Name=WP_000013046.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313249.1;locus_tag=AC00_RS02075;product=aspartate carbamoyltransferase;protein_id=WP_000013046.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 151937 152071 . - . ID=gene-AC00_RS0125965;Name=pyrL;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=AC00_RS0125965 NZ_JJLU01000138.1 Protein Homology CDS 151937 152071 . - 0 ID=cds-WP_001296693.1;Parent=gene-AC00_RS0125965;Dbxref=GenBank:WP_001296693.1;Name=WP_001296693.1;gbkey=CDS;gene=pyrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313250.1;locus_tag=AC00_RS0125965;product=pyr operon leader peptide;protein_id=WP_001296693.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 152352 152747 . - . ID=gene-AC00_RS02070;Name=yjgH;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=AC00_RS02070;old_locus_tag=AC00_4856 NZ_JJLU01000138.1 Protein Homology CDS 152352 152747 . - 0 ID=cds-WP_000230262.1;Parent=gene-AC00_RS02070;Dbxref=GenBank:WP_000230262.1;Name=WP_000230262.1;gbkey=CDS;gene=yjgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418669.1;locus_tag=AC00_RS02070;product=RidA family protein;protein_id=WP_000230262.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 152878 153591 . - . ID=gene-AC00_RS02065;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=AC00_RS02065;old_locus_tag=AC00_4857 NZ_JJLU01000138.1 Protein Homology CDS 152878 153591 . - 0 ID=cds-WP_000500727.1;Parent=gene-AC00_RS02065;Dbxref=GenBank:WP_000500727.1;Name=WP_000500727.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418670.1;locus_tag=AC00_RS02065;product=SDR family oxidoreductase;protein_id=WP_000500727.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 153662 154255 . + . ID=gene-AC00_RS02060;Name=bdcR;gbkey=Gene;gene=bdcR;gene_biotype=protein_coding;locus_tag=AC00_RS02060;old_locus_tag=AC00_4858 NZ_JJLU01000138.1 Protein Homology CDS 153662 154255 . + 0 ID=cds-WP_000256656.1;Parent=gene-AC00_RS02060;Dbxref=GenBank:WP_000256656.1;Name=WP_000256656.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=bdcR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709951.3;locus_tag=AC00_RS02060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_000256656.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 154400 154852 . + . ID=gene-AC00_RS02055;Name=tabA;gbkey=Gene;gene=tabA;gene_biotype=protein_coding;locus_tag=AC00_RS02055;old_locus_tag=AC00_4859 NZ_JJLU01000138.1 Protein Homology CDS 154400 154852 . + 0 ID=cds-WP_000583470.1;Parent=gene-AC00_RS02055;Dbxref=GenBank:WP_000583470.1;Name=WP_000583470.1;gbkey=CDS;gene=tabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313256.2;locus_tag=AC00_RS02055;product=toxin-antitoxin biofilm protein TabA;protein_id=WP_000583470.1;transl_table=11 NZ_JJLU01000138.1 RefSeq pseudogene 154975 156564 . + . ID=gene-AC00_RS31755;Name=AC00_RS31755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31755;old_locus_tag=AC00_4860;pseudo=true NZ_JJLU01000138.1 Protein Homology CDS 154975 156564 . + 0 ID=cds-AC00_RS31755;Parent=gene-AC00_RS31755;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036417.1;locus_tag=AC00_RS31755;product=DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 156636 157640 . - . ID=gene-AC00_RS02040;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=AC00_RS02040;old_locus_tag=AC00_4862 NZ_JJLU01000138.1 Protein Homology CDS 156636 157640 . - 0 ID=cds-WP_000012907.1;Parent=gene-AC00_RS02040;Dbxref=GenBank:WP_000012907.1;Name=WP_000012907.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313258.1;locus_tag=AC00_RS02040;product=ornithine carbamoyltransferase;protein_id=WP_000012907.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 157802 158218 . + . ID=gene-AC00_RS02035;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=AC00_RS02035;old_locus_tag=AC00_4863 NZ_JJLU01000138.1 Protein Homology CDS 157802 158218 . + 0 ID=cds-WP_000002953.1;Parent=gene-AC00_RS02035;Dbxref=GenBank:WP_000002953.1;Name=WP_000002953.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313259.1;locus_tag=AC00_RS02035;product=ribonuclease E inhibitor RraB;protein_id=WP_000002953.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 158264 158767 . - . ID=gene-AC00_RS02030;Name=yjgM;gbkey=Gene;gene=yjgM;gene_biotype=protein_coding;locus_tag=AC00_RS02030;old_locus_tag=AC00_4864 NZ_JJLU01000138.1 Protein Homology CDS 158264 158767 . - 0 ID=cds-WP_001059398.1;Parent=gene-AC00_RS02030;Dbxref=GenBank:WP_001059398.1;Name=WP_001059398.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;gene=yjgM;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026287.1;locus_tag=AC00_RS02030;product=GNAT family N-acetyltransferase;protein_id=WP_001059398.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 158960 160156 . + . ID=gene-AC00_RS02025;Name=yjgN;gbkey=Gene;gene=yjgN;gene_biotype=protein_coding;locus_tag=AC00_RS02025;old_locus_tag=AC00_4865 NZ_JJLU01000138.1 Protein Homology CDS 158960 160156 . + 0 ID=cds-WP_000079660.1;Parent=gene-AC00_RS02025;Dbxref=GenBank:WP_000079660.1;Name=WP_000079660.1;gbkey=CDS;gene=yjgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709944.2;locus_tag=AC00_RS02025;product=YjgN family protein;protein_id=WP_000079660.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 160212 163067 . - . ID=gene-AC00_RS02020;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=AC00_RS02020;old_locus_tag=AC00_4866 NZ_JJLU01000138.1 Protein Homology CDS 160212 163067 . - 0 ID=cds-WP_000416392.1;Parent=gene-AC00_RS02020;Dbxref=GenBank:WP_000416392.1;Name=WP_000416392.1;Ontology_term=GO:0006438,GO:0000166,GO:0004832,GO:0005524;gbkey=CDS;gene=valS;go_function=nucleotide binding|0000166||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AC00_RS02020;product=valine--tRNA ligase;protein_id=WP_000416392.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 163067 163510 . - . ID=gene-AC00_RS02015;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AC00_RS02015;old_locus_tag=AC00_4867 NZ_JJLU01000138.1 Protein Homology CDS 163067 163510 . - 0 ID=cds-WP_000786399.1;Parent=gene-AC00_RS02015;Dbxref=GenBank:WP_000786399.1;Name=WP_000786399.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AC00_RS02015;product=DNA polymerase III subunit chi;protein_id=WP_000786399.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 164058 165569 . - . ID=gene-AC00_RS02010;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=AC00_RS02010;old_locus_tag=AC00_4868 NZ_JJLU01000138.1 Protein Homology CDS 164058 165569 . - 0 ID=cds-WP_001426637.1;Parent=gene-AC00_RS02010;Dbxref=GenBank:WP_001426637.1;Name=WP_001426637.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313264.1;locus_tag=AC00_RS02010;product=leucyl aminopeptidase;protein_id=WP_001426637.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 165723 165773 . + . ID=gene-AC00_RS31400;Name=ytgA;gbkey=Gene;gene=ytgA;gene_biotype=protein_coding;locus_tag=AC00_RS31400 NZ_JJLU01000138.1 Protein Homology CDS 165723 165773 . + 0 ID=cds-WP_211180521.1;Parent=gene-AC00_RS31400;Dbxref=GenBank:WP_211180521.1;Name=WP_211180521.1;gbkey=CDS;gene=ytgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051214.1;locus_tag=AC00_RS31400;product=protein YtgA;protein_id=WP_211180521.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 165836 166936 . + . ID=gene-AC00_RS02005;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AC00_RS02005;old_locus_tag=AC00_4870 NZ_JJLU01000138.1 Protein Homology CDS 165836 166936 . + 0 ID=cds-WP_000584112.1;Parent=gene-AC00_RS02005;Dbxref=GenBank:WP_000584112.1;Name=WP_000584112.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313265.1;locus_tag=AC00_RS02005;product=LPS export ABC transporter permease LptF;protein_id=WP_000584112.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 166936 168018 . + . ID=gene-AC00_RS02000;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AC00_RS02000;old_locus_tag=AC00_4871 NZ_JJLU01000138.1 Protein Homology CDS 166936 168018 . + 0 ID=cds-WP_001295681.1;Parent=gene-AC00_RS02000;Dbxref=GenBank:WP_001295681.1;Name=WP_001295681.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=AC00_RS02000;product=LPS export ABC transporter permease LptG;protein_id=WP_001295681.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 168179 169681 . - . ID=gene-AC00_RS01995;Name=yjgR;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=AC00_RS01995;old_locus_tag=AC00_4872 NZ_JJLU01000138.1 Protein Homology CDS 168179 169681 . - 0 ID=cds-WP_001424443.1;Parent=gene-AC00_RS01995;Dbxref=GenBank:WP_001424443.1;Name=WP_001424443.1;Ontology_term=GO:0005524;gbkey=CDS;gene=yjgR;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313267.1;locus_tag=AC00_RS01995;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_001424443.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 169759 170757 . - . ID=gene-AC00_RS01990;Name=idnR;gbkey=Gene;gene=idnR;gene_biotype=protein_coding;gene_synonym=gntH,yjgS;locus_tag=AC00_RS01990;old_locus_tag=AC00_4873 NZ_JJLU01000138.1 Protein Homology CDS 169759 170757 . - 0 ID=cds-WP_001309159.1;Parent=gene-AC00_RS01990;Dbxref=GenBank:WP_001309159.1;Name=WP_001309159.1;Ontology_term=GO:0006355,GO:0019521,GO:0003700;gbkey=CDS;gene=idnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418685.1;locus_tag=AC00_RS01990;product=DNA-binding transcriptional regulator IdnR;protein_id=WP_001309159.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 170824 172143 . - . ID=gene-AC00_RS01985;Name=idnT;gbkey=Gene;gene=idnT;gene_biotype=protein_coding;locus_tag=AC00_RS01985;old_locus_tag=AC00_4874 NZ_JJLU01000138.1 Protein Homology CDS 170824 172143 . - 0 ID=cds-WP_001128335.1;Parent=gene-AC00_RS01985;Dbxref=GenBank:WP_001128335.1;Name=WP_001128335.1;gbkey=CDS;gene=idnT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418686.1;locus_tag=AC00_RS01985;product=gnt-II system L-idonate transporter;protein_id=WP_001128335.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 172208 172972 . - . ID=gene-AC00_RS01980;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=AC00_RS01980;old_locus_tag=AC00_4875 NZ_JJLU01000138.1 Protein Homology CDS 172208 172972 . - 0 ID=cds-WP_000998695.1;Parent=gene-AC00_RS01980;Dbxref=GenBank:WP_000998695.1;Name=WP_000998695.1;gbkey=CDS;gene=idnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418687.1;locus_tag=AC00_RS01980;product=gluconate 5-dehydrogenase;protein_id=WP_000998695.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 172996 174027 . - . ID=gene-AC00_RS01975;Name=idnD;gbkey=Gene;gene=idnD;gene_biotype=protein_coding;locus_tag=AC00_RS01975;old_locus_tag=AC00_4876 NZ_JJLU01000138.1 Protein Homology CDS 172996 174027 . - 0 ID=cds-WP_001197410.1;Parent=gene-AC00_RS01975;Dbxref=GenBank:WP_001197410.1;Name=WP_001197410.1;gbkey=CDS;gene=idnD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418688.1;locus_tag=AC00_RS01975;product=L-idonate 5-dehydrogenase;protein_id=WP_001197410.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 174244 174807 . + . ID=gene-AC00_RS01970;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=AC00_RS01970;old_locus_tag=AC00_4877 NZ_JJLU01000138.1 Protein Homology CDS 174244 174807 . + 0 ID=cds-WP_000896741.1;Parent=gene-AC00_RS01970;Dbxref=GenBank:WP_000896741.1;Name=WP_000896741.1;gbkey=CDS;gene=idnK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418689.1;locus_tag=AC00_RS01970;product=gluconokinase;protein_id=WP_000896741.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 174811 175830 . - . ID=gene-AC00_RS01965;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=AC00_RS01965;old_locus_tag=AC00_4878 NZ_JJLU01000138.1 Protein Homology CDS 174811 175830 . - 0 ID=cds-WP_000061766.1;Parent=gene-AC00_RS01965;Dbxref=GenBank:WP_000061766.1;Name=WP_000061766.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418690.4;locus_tag=AC00_RS01965;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_000061766.1;transl_table=11 NZ_JJLU01000138.1 RefSeq gene 176026 176110 . + . ID=gene-AC00_RS01960;Name=AC00_RS01960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS01960;old_locus_tag=AC00_4879 NZ_JJLU01000138.1 tRNAscan-SE tRNA 176026 176110 . + . ID=rna-AC00_RS01960;Parent=gene-AC00_RS01960;anticodon=(pos:176060..176062);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01960;product=tRNA-Leu NZ_JJLU01000138.1 tRNAscan-SE exon 176026 176110 . + . ID=exon-AC00_RS01960-1;Parent=rna-AC00_RS01960;anticodon=(pos:176060..176062);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01960;product=tRNA-Leu NZ_JJLU01000138.1 RefSeq gene 176297 177562 . + . ID=gene-AC00_RS01955;Name=AC00_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01955;old_locus_tag=AC00_4880 NZ_JJLU01000138.1 Protein Homology CDS 176297 177562 . + 0 ID=cds-WP_001219009.1;Parent=gene-AC00_RS01955;Dbxref=GenBank:WP_001219009.1;Name=WP_001219009.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001642584.1;locus_tag=AC00_RS01955;product=tyrosine-type recombinase/integrase;protein_id=WP_001219009.1;transl_table=11 NZ_JJLU01000138.1 RefSeq pseudogene 177634 178249 . - . ID=gene-AC00_RS01950;Name=AC00_RS01950;end_range=178249,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01950;old_locus_tag=AC00_4881;partial=true;pseudo=true NZ_JJLU01000138.1 Protein Homology CDS 177634 178249 . - 2 ID=cds-AC00_RS01950;Parent=gene-AC00_RS01950;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=178249,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=AC00_RS01950;partial=true;product=IS1-like element IS1X2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000139.1 1 14175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000139.1 RefSeq region 1 14175 . + . ID=NZ_JJLU01000139.1:1..14175;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000139.1 RefSeq gene 106 327 . + . ID=gene-AC00_RS01945;Name=AC00_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01945;old_locus_tag=AC00_4883 NZ_JJLU01000139.1 Protein Homology CDS 106 327 . + 0 ID=cds-WP_000692345.1-2;Parent=gene-AC00_RS01945;Dbxref=GenBank:WP_000692345.1;Name=WP_000692345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AC00_RS01945;product=DUF987 domain-containing protein;protein_id=WP_000692345.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 400 768 . + . ID=gene-AC00_RS0125975;Name=AC00_RS0125975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0125975 NZ_JJLU01000139.1 Protein Homology CDS 400 768 . + 0 ID=cds-WP_077628165.1;Parent=gene-AC00_RS0125975;Dbxref=GenBank:WP_077628165.1;Name=WP_077628165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353972.1;locus_tag=AC00_RS0125975;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_077628165.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 845 1222 . + . ID=gene-AC00_RS01940;Name=AC00_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01940;old_locus_tag=AC00_4885 NZ_JJLU01000139.1 Protein Homology CDS 845 1222 . + 0 ID=cds-WP_000854685.1;Parent=gene-AC00_RS01940;Dbxref=GenBank:WP_000854685.1;Name=WP_000854685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001683029.1;locus_tag=AC00_RS01940;product=TA system toxin CbtA family protein;protein_id=WP_000854685.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 1219 1707 . + . ID=gene-AC00_RS01935;Name=AC00_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01935;old_locus_tag=AC00_4886 NZ_JJLU01000139.1 Protein Homology CDS 1219 1707 . + 0 ID=cds-WP_032216558.1;Parent=gene-AC00_RS01935;Dbxref=GenBank:WP_032216558.1;Name=WP_032216558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392970.1;locus_tag=AC00_RS01935;product=DUF5983 family protein;protein_id=WP_032216558.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 1719 1916 . + . ID=gene-AC00_RS01930;Name=AC00_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01930;old_locus_tag=AC00_4887 NZ_JJLU01000139.1 Protein Homology CDS 1719 1916 . + 0 ID=cds-WP_000839243.1;Parent=gene-AC00_RS01930;Dbxref=GenBank:WP_000839243.1;Name=WP_000839243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309435.1;locus_tag=AC00_RS01930;product=DUF957 domain-containing protein;protein_id=WP_000839243.1;transl_table=11 NZ_JJLU01000139.1 RefSeq pseudogene 2001 2150 . + . ID=gene-AC00_RS30980;Name=AC00_RS30980;end_range=2150,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30980;partial=true;pseudo=true NZ_JJLU01000139.1 Protein Homology CDS 2001 2150 . + 0 ID=cds-AC00_RS30980;Parent=gene-AC00_RS30980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2150,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309436.1;locus_tag=AC00_RS30980;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000139.1 RefSeq pseudogene 2141 2256 . + . ID=gene-AC00_RS31655;Name=AC00_RS31655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31655;partial=true;pseudo=true;start_range=.,2141 NZ_JJLU01000139.1 Protein Homology CDS 2141 2256 . + 0 ID=cds-AC00_RS31655;Parent=gene-AC00_RS31655;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000940052.1;locus_tag=AC00_RS31655;partial=true;product=helix-turn-helix transcriptional regulator;pseudo=true;start_range=.,2141;transl_table=11 NZ_JJLU01000139.1 RefSeq pseudogene 2914 3063 . - . ID=gene-AC00_RS31405;Name=AC00_RS31405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31405;partial=true;pseudo=true;start_range=.,2914 NZ_JJLU01000139.1 Protein Homology CDS 2914 3063 . - 0 ID=cds-AC00_RS31405;Parent=gene-AC00_RS31405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_080685909.1;locus_tag=AC00_RS31405;partial=true;product=phosphorothioated DNA-binding restriction endonuclease;pseudo=true;start_range=.,2914;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 3200 3850 . + . ID=gene-AC00_RS01920;Name=AC00_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01920;old_locus_tag=AC00_4890 NZ_JJLU01000139.1 Protein Homology CDS 3200 3850 . + 0 ID=cds-WP_001037966.1;Parent=gene-AC00_RS01920;Dbxref=GenBank:WP_001037966.1;Name=WP_001037966.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001586610.1;locus_tag=AC00_RS01920;product=HNH endonuclease;protein_id=WP_001037966.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 3850 3939 . + . ID=gene-AC00_RS31760;Name=AC00_RS31760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31760 NZ_JJLU01000139.1 Protein Homology CDS 3850 3939 . + 0 ID=cds-WP_418267963.1;Parent=gene-AC00_RS31760;Dbxref=GenBank:WP_418267963.1;Name=WP_418267963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051216.1;locus_tag=AC00_RS31760;product=hypothetical protein;protein_id=WP_418267963.1;transl_table=11 NZ_JJLU01000139.1 RefSeq pseudogene 4272 4838 . - . ID=gene-AC00_RS31765;Name=AC00_RS31765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31765;partial=true;pseudo=true;start_range=.,4272 NZ_JJLU01000139.1 Protein Homology CDS 4272 4838 . - 0 ID=cds-AC00_RS31765;Parent=gene-AC00_RS31765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015585.6;locus_tag=AC00_RS31765;partial=true;product=sialate O-acetylesterase;pseudo=true;start_range=.,4272;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 4903 6009 . - . ID=gene-AC00_RS01910;Name=nanM;gbkey=Gene;gene=nanM;gene_biotype=protein_coding;locus_tag=AC00_RS01910;old_locus_tag=AC00_4892 NZ_JJLU01000139.1 Protein Homology CDS 4903 6009 . - 0 ID=cds-WP_001353974.1;Parent=gene-AC00_RS01910;Dbxref=GenBank:WP_001353974.1;Name=WP_001353974.1;gbkey=CDS;gene=nanM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AC00_RS01910;product=N-acetylneuraminate epimerase;protein_id=WP_001353974.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 6029 6745 . - . ID=gene-AC00_RS01905;Name=nanC;gbkey=Gene;gene=nanC;gene_biotype=protein_coding;locus_tag=AC00_RS01905;old_locus_tag=AC00_4893 NZ_JJLU01000139.1 Protein Homology CDS 6029 6745 . - 0 ID=cds-WP_001360088.1;Parent=gene-AC00_RS01905;Dbxref=GenBank:WP_001360088.1;Name=WP_001360088.1;gbkey=CDS;gene=nanC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313297.2;locus_tag=AC00_RS01905;product=N-acetylneuraminic acid outer membrane channel NanC;protein_id=WP_001360088.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 8199 8801 . + . ID=gene-AC00_RS01900;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=AC00_RS01900;old_locus_tag=AC00_4894 NZ_JJLU01000139.1 Protein Homology CDS 8199 8801 . + 0 ID=cds-WP_000790583.1;Parent=gene-AC00_RS01900;Dbxref=GenBank:WP_000790583.1;Name=WP_000790583.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313298.1;locus_tag=AC00_RS01900;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_000790583.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 9278 9874 . + . ID=gene-AC00_RS01895;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=AC00_RS01895;old_locus_tag=AC00_4895 NZ_JJLU01000139.1 Protein Homology CDS 9278 9874 . + 0 ID=cds-WP_000044711.1;Parent=gene-AC00_RS01895;Dbxref=GenBank:WP_000044711.1;Name=WP_000044711.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418733.1;locus_tag=AC00_RS01895;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_000044711.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 10356 10910 . + . ID=gene-AC00_RS01890;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=AC00_RS01890;old_locus_tag=AC00_4896 NZ_JJLU01000139.1 Protein Homology CDS 10356 10910 . + 0 ID=cds-WP_000695589.1;Parent=gene-AC00_RS01890;Dbxref=GenBank:WP_000695589.1;Name=WP_000695589.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709921.1;locus_tag=AC00_RS01890;product=type 1 fimbrial major subunit FimA;protein_id=WP_000695589.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 10975 11514 . + . ID=gene-AC00_RS01885;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=AC00_RS01885;old_locus_tag=AC00_4897 NZ_JJLU01000139.1 Protein Homology CDS 10975 11514 . + 0 ID=cds-WP_000824114.1;Parent=gene-AC00_RS01885;Dbxref=GenBank:WP_000824114.1;Name=WP_000824114.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimI;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418735.2;locus_tag=AC00_RS01885;product=fimbrial protein;protein_id=WP_000824114.1;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 11551 12276 . + . ID=gene-AC00_RS01880;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=AC00_RS01880;old_locus_tag=AC00_4899 NZ_JJLU01000139.1 Protein Homology CDS 11551 12276 . + 0 ID=cds-WP_000066560.1;Parent=gene-AC00_RS01880;Dbxref=GenBank:WP_000066560.1;Name=WP_000066560.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418736.3;locus_tag=AC00_RS01880;product=type 1 fimbria chaperone FimC;protein_id=WP_000066560.1;transl_table=11 NZ_JJLU01000139.1 RefSeq pseudogene 12343 13953 . + . ID=gene-AC00_RS01875;Name=fimD;end_range=13953,.;gbkey=Gene;gene=fimD;gene_biotype=pseudogene;locus_tag=AC00_RS01875;old_locus_tag=AC00_4900;partial=true;pseudo=true NZ_JJLU01000139.1 Protein Homology CDS 12343 13953 . + 0 ID=cds-AC00_RS01875;Parent=gene-AC00_RS01875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=13953,.;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313303.1;locus_tag=AC00_RS01875;partial=true;product=fimbrial usher FimD;pseudo=true;transl_table=11 NZ_JJLU01000139.1 RefSeq gene 13927 14175 . - . ID=gene-AC00_RS28750;Name=AC00_RS28750;end_range=14175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28750;partial=true NZ_JJLU01000139.1 Protein Homology CDS 13927 14175 . - 0 ID=cds-WP_000675026.1-4;Parent=gene-AC00_RS28750;Dbxref=GenBank:WP_000675026.1;Name=WP_000675026.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=14175,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28750;partial=true;product=IS1 family transposase;protein_id=WP_000675026.1;transl_table=11 ##sequence-region NZ_JJLU01000140.1 1 3424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000140.1 RefSeq region 1 3424 . + . ID=NZ_JJLU01000140.1:1..3424;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000140.1 RefSeq gene 1 243 . - . ID=gene-AC00_RS0126000;Name=AC00_RS0126000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126000;old_locus_tag=AC00_4901;partial=true;start_range=.,1 NZ_JJLU01000140.1 Protein Homology CDS 1 243 . - 0 ID=cds-WP_001530252.1-3;Parent=gene-AC00_RS0126000;Dbxref=GenBank:WP_001530252.1;Name=WP_001530252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558260.1;locus_tag=AC00_RS0126000;partial=true;product=IS1-like element transposase;protein_id=WP_001530252.1;start_range=.,1;transl_table=11 NZ_JJLU01000140.1 RefSeq pseudogene 299 1375 . + . ID=gene-AC00_RS01870;Name=fimD;gbkey=Gene;gene=fimD;gene_biotype=pseudogene;locus_tag=AC00_RS01870;old_locus_tag=AC00_4902;partial=true;pseudo=true;start_range=.,299 NZ_JJLU01000140.1 Protein Homology CDS 299 1375 . + 0 ID=cds-AC00_RS01870;Parent=gene-AC00_RS01870;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=fimD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418737.1;locus_tag=AC00_RS01870;partial=true;product=fimbrial usher FimD;pseudo=true;start_range=.,299;transl_table=11 NZ_JJLU01000140.1 RefSeq gene 1385 1915 . + . ID=gene-AC00_RS01865;Name=fimF;gbkey=Gene;gene=fimF;gene_biotype=protein_coding;locus_tag=AC00_RS01865;old_locus_tag=AC00_4903 NZ_JJLU01000140.1 Protein Homology CDS 1385 1915 . + 0 ID=cds-WP_001244828.1;Parent=gene-AC00_RS01865;Dbxref=GenBank:WP_001244828.1;Name=WP_001244828.1;gbkey=CDS;gene=fimF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313304.1;locus_tag=AC00_RS01865;product=type 1 fimbria minor subunit FimF;protein_id=WP_001244828.1;transl_table=11 NZ_JJLU01000140.1 RefSeq gene 1988 2431 . + . ID=gene-AC00_RS01860;Name=AC00_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01860;old_locus_tag=AC00_4904 NZ_JJLU01000140.1 Protein Homology CDS 1988 2431 . + 0 ID=cds-WP_306234496.1;Parent=gene-AC00_RS01860;Dbxref=GenBank:WP_306234496.1;Name=WP_306234496.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418739.1;locus_tag=AC00_RS01860;product=fimbrial protein;protein_id=WP_306234496.1;transl_table=11 NZ_JJLU01000140.1 RefSeq pseudogene 2451 2819 . + . ID=gene-AC00_RS01855;Name=AC00_RS01855;end_range=2819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01855;old_locus_tag=AC00_4905;partial=true;pseudo=true NZ_JJLU01000140.1 Protein Homology CDS 2451 2819 . + 0 ID=cds-AC00_RS01855;Parent=gene-AC00_RS01855;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=AC00_RS01855;partial=true;product=fimbrial protein;pseudo=true;transl_table=11 NZ_JJLU01000140.1 RefSeq pseudogene 2862 3424 . + . ID=gene-AC00_RS01850;Name=AC00_RS01850;end_range=3424,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01850;old_locus_tag=AC00_4906;partial=true;pseudo=true NZ_JJLU01000140.1 Protein Homology CDS 2862 3424 . + 0 ID=cds-AC00_RS01850;Parent=gene-AC00_RS01850;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=3424,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS01850;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000141.1 1 55854 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000141.1 RefSeq region 1 55854 . + . ID=NZ_JJLU01000141.1:1..55854;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000141.1 RefSeq pseudogene 1 303 . + . ID=gene-AC00_RS01845;Name=AC00_RS01845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01845;old_locus_tag=AC00_4907;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000141.1 Protein Homology CDS 1 303 . + 0 ID=cds-AC00_RS01845;Parent=gene-AC00_RS01845;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS01845;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000141.1 RefSeq pseudogene 320 874 . + . ID=gene-AC00_RS01840;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=pseudogene;locus_tag=AC00_RS01840;old_locus_tag=AC00_4908;partial=true;pseudo=true;start_range=.,320 NZ_JJLU01000141.1 Protein Homology CDS 320 874 . + 0 ID=cds-AC00_RS01840;Parent=gene-AC00_RS01840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=fimH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418740.1;locus_tag=AC00_RS01840;partial=true;product=type 1 fimbria D-mannose specific adhesin FimH;pseudo=true;start_range=.,320;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 1047 2390 . - . ID=gene-AC00_RS01835;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=AC00_RS01835;old_locus_tag=AC00_4909 NZ_JJLU01000141.1 Protein Homology CDS 1047 2390 . - 0 ID=cds-WP_000558251.1;Parent=gene-AC00_RS01835;Dbxref=GenBank:WP_000558251.1;Name=WP_000558251.1;gbkey=CDS;gene=gntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313307.1;locus_tag=AC00_RS01835;product=gluconate permease GntP;protein_id=WP_000558251.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 2730 3914 . + . ID=gene-AC00_RS01830;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=AC00_RS01830;old_locus_tag=AC00_4910 NZ_JJLU01000141.1 Protein Homology CDS 2730 3914 . + 0 ID=cds-WP_000438582.1;Parent=gene-AC00_RS01830;Dbxref=GenBank:WP_000438582.1;Name=WP_000438582.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709912.2;locus_tag=AC00_RS01830;product=mannonate dehydratase;protein_id=WP_000438582.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 3995 5455 . + . ID=gene-AC00_RS01825;Name=uxuB;gbkey=Gene;gene=uxuB;gene_biotype=protein_coding;locus_tag=AC00_RS01825;old_locus_tag=AC00_4911 NZ_JJLU01000141.1 Protein Homology CDS 3995 5455 . + 0 ID=cds-WP_000208194.1;Parent=gene-AC00_RS01825;Dbxref=GenBank:WP_000208194.1;Name=WP_000208194.1;gbkey=CDS;gene=uxuB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313309.1;locus_tag=AC00_RS01825;product=fructuronate reductase;protein_id=WP_000208194.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 5670 6443 . + . ID=gene-AC00_RS01820;Name=uxuR;gbkey=Gene;gene=uxuR;gene_biotype=protein_coding;locus_tag=AC00_RS01820;old_locus_tag=AC00_4912 NZ_JJLU01000141.1 Protein Homology CDS 5670 6443 . + 0 ID=cds-WP_000833691.1;Parent=gene-AC00_RS01820;Dbxref=GenBank:WP_000833691.1;Name=WP_000833691.1;gbkey=CDS;gene=uxuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000833692.1;locus_tag=AC00_RS01820;product=Uxu operon transcriptional regulator;protein_id=WP_000833691.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 6584 7378 . - . ID=gene-AC00_RS01815;Name=yjiC;gbkey=Gene;gene=yjiC;gene_biotype=protein_coding;locus_tag=AC00_RS01815;old_locus_tag=AC00_4913 NZ_JJLU01000141.1 Protein Homology CDS 6584 7378 . - 0 ID=cds-WP_247806857.1;Parent=gene-AC00_RS01815;Dbxref=GenBank:WP_247806857.1;Name=WP_247806857.1;gbkey=CDS;gene=yjiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001707419.1;locus_tag=AC00_RS01815;product=DUF2686 family protein;protein_id=WP_247806857.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 7700 7750 . + . ID=gene-AC00_RS31770;Name=AC00_RS31770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31770 NZ_JJLU01000141.1 Protein Homology CDS 7700 7750 . + 0 ID=cds-WP_418515417.1;Parent=gene-AC00_RS31770;Dbxref=GenBank:WP_418515417.1;Name=WP_418515417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048182.1;locus_tag=AC00_RS31770;product=hypothetical protein;protein_id=WP_418515417.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 7747 7890 . + . ID=gene-AC00_RS31590;Name=ytiD;gbkey=Gene;gene=ytiD;gene_biotype=protein_coding;locus_tag=AC00_RS31590 NZ_JJLU01000141.1 Protein Homology CDS 7747 7890 . + 0 ID=cds-WP_001329085.1;Parent=gene-AC00_RS31590;Dbxref=GenBank:WP_001329085.1;Name=WP_001329085.1;gbkey=CDS;gene=ytiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518831.1;locus_tag=AC00_RS31590;product=protein YtiD;protein_id=WP_001329085.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 8006 8089 . + . ID=gene-AC00_RS30645;Name=idlP;gbkey=Gene;gene=idlP;gene_biotype=protein_coding;locus_tag=AC00_RS30645 NZ_JJLU01000141.1 Protein Homology CDS 8006 8089 . + 0 ID=cds-WP_120795393.1;Parent=gene-AC00_RS30645;Dbxref=GenBank:WP_120795393.1;Name=WP_120795393.1;gbkey=CDS;gene=idlP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518832.1;locus_tag=AC00_RS30645;product=iraD leader peptide IdlP;protein_id=WP_120795393.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 8086 8478 . + . ID=gene-AC00_RS01805;Name=iraD;gbkey=Gene;gene=iraD;gene_biotype=protein_coding;locus_tag=AC00_RS01805;old_locus_tag=AC00_4915 NZ_JJLU01000141.1 Protein Homology CDS 8086 8478 . + 0 ID=cds-WP_000986215.1;Parent=gene-AC00_RS01805;Dbxref=GenBank:WP_000986215.1;Name=WP_000986215.1;gbkey=CDS;gene=iraD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418746.4;locus_tag=AC00_RS01805;product=anti-adapter protein IraD;protein_id=WP_000986215.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 8471 9382 . - . ID=gene-AC00_RS01800;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=AC00_RS01800;old_locus_tag=AC00_4916 NZ_JJLU01000141.1 Protein Homology CDS 8471 9382 . - 0 ID=cds-WP_000340758.1;Parent=gene-AC00_RS01800;Dbxref=GenBank:WP_000340758.1;Name=WP_000340758.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418747.1;locus_tag=AC00_RS01800;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_000340758.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 9447 10619 . - . ID=gene-AC00_RS01795;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=protein_coding;locus_tag=AC00_RS01795;old_locus_tag=AC00_4917 NZ_JJLU01000141.1 Protein Homology CDS 9447 10619 . - 0 ID=cds-WP_000568416.1;Parent=gene-AC00_RS01795;Dbxref=GenBank:WP_000568416.1;Name=WP_000568416.1;Ontology_term=GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313313.1;locus_tag=AC00_RS01795;product=beta-aspartyl-peptidase;protein_id=WP_000568416.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 10632 11093 . - . ID=gene-AC00_RS01790;Name=yjiG;gbkey=Gene;gene=yjiG;gene_biotype=protein_coding;locus_tag=AC00_RS01790;old_locus_tag=AC00_4918 NZ_JJLU01000141.1 Protein Homology CDS 10632 11093 . - 0 ID=cds-WP_000211957.1;Parent=gene-AC00_RS01790;Dbxref=GenBank:WP_000211957.1;Name=WP_000211957.1;gbkey=CDS;gene=yjiG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313314.1;locus_tag=AC00_RS01790;product=YjiG family protein;protein_id=WP_000211957.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 11090 11773 . - . ID=gene-AC00_RS01785;Name=yjiH;gbkey=Gene;gene=yjiH;gene_biotype=protein_coding;locus_tag=AC00_RS01785;old_locus_tag=AC00_4919 NZ_JJLU01000141.1 Protein Homology CDS 11090 11773 . - 0 ID=cds-WP_001295597.1;Parent=gene-AC00_RS01785;Dbxref=GenBank:WP_001295597.1;Name=WP_001295597.1;gbkey=CDS;gene=yjiH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418750.2;locus_tag=AC00_RS01785;product=nucleoside recognition domain-containing protein;protein_id=WP_001295597.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 12022 12576 . + . ID=gene-AC00_RS01780;Name=kptA;gbkey=Gene;gene=kptA;gene_biotype=protein_coding;locus_tag=AC00_RS01780;old_locus_tag=AC00_4920 NZ_JJLU01000141.1 Protein Homology CDS 12022 12576 . + 0 ID=cds-WP_001151855.1;Parent=gene-AC00_RS01780;Dbxref=GenBank:WP_001151855.1;Name=WP_001151855.1;gbkey=CDS;gene=kptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151849.1;locus_tag=AC00_RS01780;product=RNA 2'-phosphotransferase;protein_id=WP_001151855.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 12589 13767 . - . ID=gene-AC00_RS01775;Name=yjiJ;gbkey=Gene;gene=yjiJ;gene_biotype=protein_coding;locus_tag=AC00_RS01775;old_locus_tag=AC00_4921 NZ_JJLU01000141.1 Protein Homology CDS 12589 13767 . - 0 ID=cds-WP_001139966.1;Parent=gene-AC00_RS01775;Dbxref=GenBank:WP_001139966.1;Name=WP_001139966.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjiJ;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418752.1;locus_tag=AC00_RS01775;product=MFS transporter;protein_id=WP_001139966.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 13835 14695 . - . ID=gene-AC00_RS01770;Name=yjiK;gbkey=Gene;gene=yjiK;gene_biotype=protein_coding;locus_tag=AC00_RS01770;old_locus_tag=AC00_4922 NZ_JJLU01000141.1 Protein Homology CDS 13835 14695 . - 0 ID=cds-WP_001317601.1;Parent=gene-AC00_RS01770;Dbxref=GenBank:WP_001317601.1;Name=WP_001317601.1;gbkey=CDS;gene=yjiK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418753.3;locus_tag=AC00_RS01770;product=SdiA-regulated domain-containing protein;protein_id=WP_001317601.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 14760 15017 . - . ID=gene-AC00_RS01765;Name=ytiA;gbkey=Gene;gene=ytiA;gene_biotype=protein_coding;locus_tag=AC00_RS01765;old_locus_tag=AC00_4923 NZ_JJLU01000141.1 Protein Homology CDS 14760 15017 . - 0 ID=cds-WP_000666413.1;Parent=gene-AC00_RS01765;Dbxref=GenBank:WP_000666413.1;Name=WP_000666413.1;gbkey=CDS;gene=ytiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009518833.1;locus_tag=AC00_RS01765;product=DUF3343 domain-containing protein;protein_id=WP_000666413.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 15014 15781 . - . ID=gene-AC00_RS01760;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=AC00_RS01760;old_locus_tag=AC00_4924 NZ_JJLU01000141.1 Protein Homology CDS 15014 15781 . - 0 ID=cds-WP_001297641.1;Parent=gene-AC00_RS01760;Dbxref=GenBank:WP_001297641.1;Name=WP_001297641.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298028.1;locus_tag=AC00_RS01760;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_001297641.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 15791 16942 . - . ID=gene-AC00_RS01755;Name=yjiM;gbkey=Gene;gene=yjiM;gene_biotype=protein_coding;locus_tag=AC00_RS01755;old_locus_tag=AC00_4925 NZ_JJLU01000141.1 Protein Homology CDS 15791 16942 . - 0 ID=cds-WP_001324743.1;Parent=gene-AC00_RS01755;Dbxref=GenBank:WP_001324743.1;Name=WP_001324743.1;gbkey=CDS;gene=yjiM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418755.4;locus_tag=AC00_RS01755;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_001324743.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 17058 18338 . - . ID=gene-AC00_RS01750;Name=yjiN;gbkey=Gene;gene=yjiN;gene_biotype=protein_coding;locus_tag=AC00_RS01750;old_locus_tag=AC00_4926 NZ_JJLU01000141.1 Protein Homology CDS 17058 18338 . - 0 ID=cds-WP_001037390.1;Parent=gene-AC00_RS01750;Dbxref=GenBank:WP_001037390.1;Name=WP_001037390.1;gbkey=CDS;gene=yjiN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741264.1;locus_tag=AC00_RS01750;product=DUF445 domain-containing protein;protein_id=WP_001037390.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 18379 19611 . - . ID=gene-AC00_RS01745;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=AC00_RS01745;old_locus_tag=AC00_4927 NZ_JJLU01000141.1 Protein Homology CDS 18379 19611 . - 0 ID=cds-WP_001137031.1;Parent=gene-AC00_RS01745;Dbxref=GenBank:WP_001137031.1;Name=WP_001137031.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313327.1;locus_tag=AC00_RS01745;product=multidrug efflux MFS transporter MdtM;protein_id=WP_001137031.1;transl_table=11 NZ_JJLU01000141.1 RefSeq pseudogene 19926 20623 . + . ID=gene-AC00_RS28755;Name=AC00_RS28755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28755;pseudo=true NZ_JJLU01000141.1 Protein Homology CDS 19926 20623 . + 0 ID=cds-AC00_RS28755;Parent=gene-AC00_RS28755;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558153.1;locus_tag=AC00_RS28755;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 20822 21109 . + . ID=gene-AC00_RS01735;Name=AC00_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01735;old_locus_tag=AC00_4930 NZ_JJLU01000141.1 Protein Homology CDS 20822 21109 . + 0 ID=cds-WP_001297643.1;Parent=gene-AC00_RS01735;Dbxref=GenBank:WP_001297643.1;Name=WP_001297643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463387.1;locus_tag=AC00_RS01735;product=BrnT family toxin;protein_id=WP_001297643.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 21096 21398 . + . ID=gene-AC00_RS01730;Name=AC00_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01730;old_locus_tag=AC00_4931 NZ_JJLU01000141.1 Protein Homology CDS 21096 21398 . + 0 ID=cds-WP_000063160.1;Parent=gene-AC00_RS01730;Dbxref=GenBank:WP_000063160.1;Name=WP_000063160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004020443.1;locus_tag=AC00_RS01730;product=BrnA antitoxin family protein;protein_id=WP_000063160.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 21432 22388 . - . ID=gene-AC00_RS01725;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=AC00_RS01725;old_locus_tag=AC00_4932 NZ_JJLU01000141.1 Protein Homology CDS 21432 22388 . - 0 ID=cds-WP_001297640.1;Parent=gene-AC00_RS01725;Dbxref=GenBank:WP_001297640.1;Name=WP_001297640.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313338.2;locus_tag=AC00_RS01725;product=GTPase;protein_id=WP_001297640.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 22399 22602 . - . ID=gene-AC00_RS01720;Name=yjiX;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=AC00_RS01720;old_locus_tag=AC00_4933 NZ_JJLU01000141.1 Protein Homology CDS 22399 22602 . - 0 ID=cds-WP_000467859.1;Parent=gene-AC00_RS01720;Dbxref=GenBank:WP_000467859.1;Name=WP_000467859.1;gbkey=CDS;gene=yjiX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=AC00_RS01720;product=YbdD/YjiX family protein;protein_id=WP_000467859.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 22652 24802 . - . ID=gene-AC00_RS01715;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=AC00_RS01715;old_locus_tag=AC00_4934 NZ_JJLU01000141.1 Protein Homology CDS 22652 24802 . - 0 ID=cds-WP_001295524.1;Parent=gene-AC00_RS01715;Dbxref=GenBank:WP_001295524.1;Name=WP_001295524.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418774.2;locus_tag=AC00_RS01715;product=pyruvate/proton symporter BtsT;protein_id=WP_001295524.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 25179 26843 . + . ID=gene-AC00_RS01710;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=AC00_RS01710;old_locus_tag=AC00_4935 NZ_JJLU01000141.1 Protein Homology CDS 25179 26843 . + 0 ID=cds-WP_000919537.1;Parent=gene-AC00_RS01710;Dbxref=GenBank:WP_000919537.1;Name=WP_000919537.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313342.1;locus_tag=AC00_RS01710;product=methyl-accepting chemotaxis protein;protein_id=WP_000919537.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 26892 28253 . - . ID=gene-AC00_RS01705;Name=lgoT;gbkey=Gene;gene=lgoT;gene_biotype=protein_coding;locus_tag=AC00_RS01705;old_locus_tag=AC00_4936 NZ_JJLU01000141.1 Protein Homology CDS 26892 28253 . - 0 ID=cds-WP_000410144.1;Parent=gene-AC00_RS01705;Dbxref=GenBank:WP_000410144.1;Name=WP_000410144.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lgoT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313343.1;locus_tag=AC00_RS01705;product=MFS transporter;protein_id=WP_000410144.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 28467 29381 . - . ID=gene-AC00_RS01700;Name=lgoR;gbkey=Gene;gene=lgoR;gene_biotype=protein_coding;locus_tag=AC00_RS01700;old_locus_tag=AC00_4937 NZ_JJLU01000141.1 Protein Homology CDS 28467 29381 . - 0 ID=cds-WP_032288388.1;Parent=gene-AC00_RS01700;Dbxref=GenBank:WP_032288388.1;Name=WP_032288388.1;gbkey=CDS;gene=lgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313344.2;locus_tag=AC00_RS01700;product=GntR family transcriptional regulator;protein_id=WP_032288388.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 29520 30542 . + . ID=gene-AC00_RS01695;Name=lgoD;gbkey=Gene;gene=lgoD;gene_biotype=protein_coding;locus_tag=AC00_RS01695;old_locus_tag=AC00_4938 NZ_JJLU01000141.1 Protein Homology CDS 29520 30542 . + 0 ID=cds-WP_000106030.1;Parent=gene-AC00_RS01695;Dbxref=GenBank:WP_000106030.1;Name=WP_000106030.1;gbkey=CDS;gene=lgoD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418778.4;locus_tag=AC00_RS01695;product=L-galactonate oxidoreductase;protein_id=WP_000106030.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 30682 32973 . - . ID=gene-AC00_RS01690;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=AC00_RS01690;old_locus_tag=AC00_4939 NZ_JJLU01000141.1 Protein Homology CDS 30682 32973 . - 0 ID=cds-WP_001292661.1;Parent=gene-AC00_RS01690;Dbxref=GenBank:WP_001292661.1;Name=WP_001292661.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418779.2;locus_tag=AC00_RS01690;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_001292661.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 33227 33721 . - . ID=gene-AC00_RS01685;Name=yjjA;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=AC00_RS01685;old_locus_tag=AC00_4940 NZ_JJLU01000141.1 Protein Homology CDS 33227 33721 . - 0 ID=cds-WP_001308243.1;Parent=gene-AC00_RS01685;Dbxref=GenBank:WP_001308243.1;Name=WP_001308243.1;gbkey=CDS;gene=yjjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418780.2;locus_tag=AC00_RS01685;product=DUF2501 domain-containing protein YjjA;protein_id=WP_001308243.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 33770 34507 . - . ID=gene-AC00_RS01680;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=AC00_RS01680;old_locus_tag=AC00_4941 NZ_JJLU01000141.1 Protein Homology CDS 33770 34507 . - 0 ID=cds-WP_000799911.1;Parent=gene-AC00_RS01680;Dbxref=GenBank:WP_000799911.1;Name=WP_000799911.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313348.1;locus_tag=AC00_RS01680;product=DNA replication protein DnaC;protein_id=WP_000799911.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 34510 35049 . - . ID=gene-AC00_RS01675;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=AC00_RS01675;old_locus_tag=AC00_4942 NZ_JJLU01000141.1 Protein Homology CDS 34510 35049 . - 0 ID=cds-WP_000098818.1;Parent=gene-AC00_RS01675;Dbxref=GenBank:WP_000098818.1;Name=WP_000098818.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418782.1;locus_tag=AC00_RS01675;product=primosomal protein DnaT;protein_id=WP_000098818.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 35156 35629 . - . ID=gene-AC00_RS01670;Name=yjjB;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=AC00_RS01670;old_locus_tag=AC00_4943 NZ_JJLU01000141.1 Protein Homology CDS 35156 35629 . - 0 ID=cds-WP_000538188.1;Parent=gene-AC00_RS01670;Dbxref=GenBank:WP_000538188.1;Name=WP_000538188.1;gbkey=CDS;gene=yjjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418783.2;locus_tag=AC00_RS01670;product=threonine/serine exporter;protein_id=WP_000538188.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 35620 36390 . - . ID=gene-AC00_RS01665;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;locus_tag=AC00_RS01665;old_locus_tag=AC00_4944 NZ_JJLU01000141.1 Protein Homology CDS 35620 36390 . - 0 ID=cds-WP_001340933.1;Parent=gene-AC00_RS01665;Dbxref=GenBank:WP_001340933.1;Name=WP_001340933.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;gene=yjjP;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418784.4;locus_tag=AC00_RS01665;product=threonine/serine ThrE exporter family protein;protein_id=WP_001340933.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 37009 37734 . + . ID=gene-AC00_RS0126040;Name=yjjQ;gbkey=Gene;gene=yjjQ;gene_biotype=protein_coding;locus_tag=AC00_RS0126040 NZ_JJLU01000141.1 Protein Homology CDS 37009 37734 . + 0 ID=cds-WP_032282076.1;Parent=gene-AC00_RS0126040;Dbxref=GenBank:WP_032282076.1;Name=WP_032282076.1;gbkey=CDS;gene=yjjQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313352.1;locus_tag=AC00_RS0126040;product=helix-turn-helix domain-containing protein;protein_id=WP_032282076.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 37692 38369 . + . ID=gene-AC00_RS0126045;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=AC00_RS0126045;old_locus_tag=AC00_4947 NZ_JJLU01000141.1 Protein Homology CDS 37692 38369 . + 0 ID=cds-WP_004020501.1;Parent=gene-AC00_RS0126045;Dbxref=GenBank:WP_004020501.1;Name=WP_004020501.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418786.4;locus_tag=AC00_RS0126045;product=DNA-binding transcriptional activator BglJ;protein_id=WP_004020501.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 38407 39195 . - . ID=gene-AC00_RS01660;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=AC00_RS01660;old_locus_tag=AC00_4948 NZ_JJLU01000141.1 Protein Homology CDS 38407 39195 . - 0 ID=cds-WP_032282078.1;Parent=gene-AC00_RS01660;Dbxref=GenBank:WP_032282078.1;Name=WP_032282078.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313354.1;locus_tag=AC00_RS01660;product=siderophore-iron reductase FhuF;protein_id=WP_032282078.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 39336 39572 . + . ID=gene-AC00_RS01655;Name=yjjZ;gbkey=Gene;gene=yjjZ;gene_biotype=protein_coding;locus_tag=AC00_RS01655;old_locus_tag=AC00_4949 NZ_JJLU01000141.1 Protein Homology CDS 39336 39572 . + 0 ID=cds-WP_001360092.1;Parent=gene-AC00_RS01655;Dbxref=GenBank:WP_001360092.1;Name=WP_001360092.1;gbkey=CDS;gene=yjjZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313355.3;locus_tag=AC00_RS01655;product=DUF1435 domain-containing protein;protein_id=WP_001360092.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 39611 39697 . - . ID=gene-AC00_RS01650;Name=AC00_RS01650;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS01650;old_locus_tag=AC00_4950 NZ_JJLU01000141.1 tRNAscan-SE tRNA 39611 39697 . - . ID=rna-AC00_RS01650;Parent=gene-AC00_RS01650;anticodon=(pos:complement(39661..39663));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01650;product=tRNA-Leu NZ_JJLU01000141.1 tRNAscan-SE exon 39611 39697 . - . ID=exon-AC00_RS01650-1;Parent=rna-AC00_RS01650;anticodon=(pos:complement(39661..39663));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01650;product=tRNA-Leu NZ_JJLU01000141.1 RefSeq gene 39731 39817 . - . ID=gene-AC00_RS01645;Name=AC00_RS01645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS01645;old_locus_tag=AC00_4951 NZ_JJLU01000141.1 tRNAscan-SE tRNA 39731 39817 . - . ID=rna-AC00_RS01645;Parent=gene-AC00_RS01645;anticodon=(pos:complement(39781..39783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01645;product=tRNA-Leu NZ_JJLU01000141.1 tRNAscan-SE exon 39731 39817 . - . ID=exon-AC00_RS01645-1;Parent=rna-AC00_RS01645;anticodon=(pos:complement(39781..39783));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01645;product=tRNA-Leu NZ_JJLU01000141.1 RefSeq gene 39846 39932 . - . ID=gene-AC00_RS01640;Name=AC00_RS01640;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS01640;old_locus_tag=AC00_4952 NZ_JJLU01000141.1 tRNAscan-SE tRNA 39846 39932 . - . ID=rna-AC00_RS01640;Parent=gene-AC00_RS01640;anticodon=(pos:complement(39896..39898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01640;product=tRNA-Leu NZ_JJLU01000141.1 tRNAscan-SE exon 39846 39932 . - . ID=exon-AC00_RS01640-1;Parent=rna-AC00_RS01640;anticodon=(pos:complement(39896..39898));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01640;product=tRNA-Leu NZ_JJLU01000141.1 RefSeq gene 39966 40052 . - . ID=gene-AC00_RS01635;Name=AC00_RS01635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS01635;old_locus_tag=AC00_4953 NZ_JJLU01000141.1 tRNAscan-SE tRNA 39966 40052 . - . ID=rna-AC00_RS01635;Parent=gene-AC00_RS01635;anticodon=(pos:complement(40016..40018));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01635;product=tRNA-Leu NZ_JJLU01000141.1 tRNAscan-SE exon 39966 40052 . - . ID=exon-AC00_RS01635-1;Parent=rna-AC00_RS01635;anticodon=(pos:complement(40016..40018));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01635;product=tRNA-Leu NZ_JJLU01000141.1 RefSeq gene 40081 40167 . - . ID=gene-AC00_RS01630;Name=AC00_RS01630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS01630;old_locus_tag=AC00_4954 NZ_JJLU01000141.1 tRNAscan-SE tRNA 40081 40167 . - . ID=rna-AC00_RS01630;Parent=gene-AC00_RS01630;anticodon=(pos:complement(40131..40133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01630;product=tRNA-Leu NZ_JJLU01000141.1 tRNAscan-SE exon 40081 40167 . - . ID=exon-AC00_RS01630-1;Parent=rna-AC00_RS01630;anticodon=(pos:complement(40131..40133));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS01630;product=tRNA-Leu NZ_JJLU01000141.1 RefSeq gene 40468 41499 . - . ID=gene-AC00_RS01625;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=AC00_RS01625;old_locus_tag=AC00_4955 NZ_JJLU01000141.1 Protein Homology CDS 40468 41499 . - 0 ID=cds-WP_001272323.1;Parent=gene-AC00_RS01625;Dbxref=GenBank:WP_001272323.1;Name=WP_001272323.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313356.1;locus_tag=AC00_RS01625;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_001272323.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 41602 42015 . + . ID=gene-AC00_RS01620;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=AC00_RS01620;old_locus_tag=AC00_4956 NZ_JJLU01000141.1 Protein Homology CDS 41602 42015 . + 0 ID=cds-WP_000204018.1;Parent=gene-AC00_RS01620;Dbxref=GenBank:WP_000204018.1;Name=WP_000204018.1;gbkey=CDS;gene=holD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313357.1;locus_tag=AC00_RS01620;product=DNA polymerase III subunit psi;protein_id=WP_000204018.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 41984 42430 . + . ID=gene-AC00_RS01615;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=AC00_RS01615;old_locus_tag=AC00_4957 NZ_JJLU01000141.1 Protein Homology CDS 41984 42430 . + 0 ID=cds-WP_001092461.1;Parent=gene-AC00_RS01615;Dbxref=GenBank:WP_001092461.1;Name=WP_001092461.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313358.1;locus_tag=AC00_RS01615;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001092461.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 42445 43122 . + . ID=gene-AC00_RS01610;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=AC00_RS01610;old_locus_tag=AC00_4958 NZ_JJLU01000141.1 Protein Homology CDS 42445 43122 . + 0 ID=cds-WP_000870710.1;Parent=gene-AC00_RS01610;Dbxref=GenBank:WP_000870710.1;Name=WP_000870710.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313359.1;locus_tag=AC00_RS01610;product=pyrimidine 5'-nucleotidase;protein_id=WP_000870710.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 43213 44802 . + . ID=gene-AC00_RS01605;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AC00_RS01605;old_locus_tag=AC00_4959 NZ_JJLU01000141.1 Protein Homology CDS 43213 44802 . + 0 ID=cds-WP_000175943.1;Parent=gene-AC00_RS01605;Dbxref=GenBank:WP_000175943.1;Name=WP_000175943.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313360.1;locus_tag=AC00_RS01605;product=peptide chain release factor 3;protein_id=WP_000175943.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 45195 45800 . + . ID=gene-AC00_RS01600;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=AC00_RS01600;old_locus_tag=AC00_4960 NZ_JJLU01000141.1 Protein Homology CDS 45195 45800 . + 0 ID=cds-WP_001295748.1;Parent=gene-AC00_RS01600;Dbxref=GenBank:WP_001295748.1;Name=WP_001295748.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418793.1;locus_tag=AC00_RS01600;product=molecular chaperone OsmY;protein_id=WP_001295748.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 45927 46088 . + . ID=gene-AC00_RS01595;Name=ytjA;gbkey=Gene;gene=ytjA;gene_biotype=protein_coding;locus_tag=AC00_RS01595;old_locus_tag=AC00_4961 NZ_JJLU01000141.1 Protein Homology CDS 45927 46088 . + 0 ID=cds-WP_000490275.1;Parent=gene-AC00_RS01595;Dbxref=GenBank:WP_000490275.1;Name=WP_000490275.1;gbkey=CDS;gene=ytjA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=AC00_RS01595;product=DUF1328 domain-containing protein;protein_id=WP_000490275.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 46210 47283 . + . ID=gene-AC00_RS01590;Name=yjjU;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=AC00_RS01590;old_locus_tag=AC00_4962 NZ_JJLU01000141.1 Protein Homology CDS 46210 47283 . + 0 ID=cds-WP_001543400.1;Parent=gene-AC00_RS01590;Dbxref=GenBank:WP_001543400.1;Name=WP_001543400.1;gbkey=CDS;gene=yjjU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418794.1;locus_tag=AC00_RS01590;product=patatin-like phospholipase family protein;protein_id=WP_001543400.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 47280 48062 . + . ID=gene-AC00_RS01585;Name=yjjV;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=AC00_RS01585;old_locus_tag=AC00_4963 NZ_JJLU01000141.1 Protein Homology CDS 47280 48062 . + 0 ID=cds-WP_000563060.1;Parent=gene-AC00_RS01585;Dbxref=GenBank:WP_000563060.1;Name=WP_000563060.1;Ontology_term=GO:0016788;gbkey=CDS;gene=yjjV;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313363.2;locus_tag=AC00_RS01585;product=metal-dependent hydrolase;protein_id=WP_000563060.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 48478 49341 . - . ID=gene-AC00_RS01580;Name=yjjW;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=AC00_RS01580;old_locus_tag=AC00_4964 NZ_JJLU01000141.1 Protein Homology CDS 48478 49341 . - 0 ID=cds-WP_001088439.1;Parent=gene-AC00_RS01580;Dbxref=GenBank:WP_001088439.1;Name=WP_001088439.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;gene=yjjW;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418796.1;locus_tag=AC00_RS01580;product=YjjW family glycine radical enzyme activase;protein_id=WP_001088439.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 49313 50863 . - . ID=gene-AC00_RS01575;Name=yjjI;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=AC00_RS01575;old_locus_tag=AC00_4965 NZ_JJLU01000141.1 Protein Homology CDS 49313 50863 . - 0 ID=cds-WP_001143253.1;Parent=gene-AC00_RS01575;Dbxref=GenBank:WP_001143253.1;Name=WP_001143253.1;Ontology_term=GO:0003824;gbkey=CDS;gene=yjjI;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418797.1;locus_tag=AC00_RS01575;product=YjjI family glycine radical enzyme;protein_id=WP_001143253.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 51121 51900 . + . ID=gene-AC00_RS01570;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AC00_RS01570;old_locus_tag=AC00_4967 NZ_JJLU01000141.1 Protein Homology CDS 51121 51900 . + 0 ID=cds-WP_001295412.1;Parent=gene-AC00_RS01570;Dbxref=GenBank:WP_001295412.1;Name=WP_001295412.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=AC00_RS01570;product=deoxyribose-phosphate aldolase;protein_id=WP_001295412.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 52027 53349 . + . ID=gene-AC00_RS01565;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=AC00_RS01565;old_locus_tag=AC00_4968 NZ_JJLU01000141.1 Protein Homology CDS 52027 53349 . + 0 ID=cds-WP_000477811.1;Parent=gene-AC00_RS01565;Dbxref=GenBank:WP_000477811.1;Name=WP_000477811.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=AC00_RS01565;product=thymidine phosphorylase;protein_id=WP_000477811.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 53401 54624 . + . ID=gene-AC00_RS01560;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=AC00_RS01560;old_locus_tag=AC00_4969 NZ_JJLU01000141.1 Protein Homology CDS 53401 54624 . + 0 ID=cds-WP_000816471.1;Parent=gene-AC00_RS01560;Dbxref=GenBank:WP_000816471.1;Name=WP_000816471.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313369.1;locus_tag=AC00_RS01560;product=phosphopentomutase;protein_id=WP_000816471.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 54704 55423 . + . ID=gene-AC00_RS01555;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AC00_RS01555;old_locus_tag=AC00_4970 NZ_JJLU01000141.1 Protein Homology CDS 54704 55423 . + 0 ID=cds-WP_000224877.1;Parent=gene-AC00_RS01555;Dbxref=GenBank:WP_000224877.1;Name=WP_000224877.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313370.1;locus_tag=AC00_RS01555;product=purine-nucleoside phosphorylase;protein_id=WP_000224877.1;transl_table=11 NZ_JJLU01000141.1 RefSeq gene 55584 55854 . - . ID=gene-AC00_RS01550;Name=AC00_RS01550;end_range=55854,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01550;old_locus_tag=AC00_4971;partial=true NZ_JJLU01000141.1 Protein Homology CDS 55584 55854 . - 1 ID=cds-WP_000318104.1-3;Parent=gene-AC00_RS01550;Dbxref=GenBank:WP_000318104.1;Name=WP_000318104.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=55854,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS01550;partial=true;product=IS1 family transposase;protein_id=WP_000318104.1;transl_table=11 ##sequence-region NZ_JJLU01000142.1 1 34953 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000142.1 RefSeq region 1 34953 . + . ID=NZ_JJLU01000142.1:1..34953;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000142.1 RefSeq pseudogene 1 322 . - . ID=gene-AC00_RS0126060;Name=AC00_RS0126060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0126060;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000142.1 Protein Homology CDS 1 322 . - 0 ID=cds-AC00_RS0126060;Parent=gene-AC00_RS0126060;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS0126060;partial=true;product=IS1-like element IS1B family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000142.1 RefSeq pseudogene 401 664 . - . ID=gene-AC00_RS31410;Name=AC00_RS31410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31410;pseudo=true NZ_JJLU01000142.1 Protein Homology CDS 401 664 . - 0 ID=cds-AC00_RS31410;Parent=gene-AC00_RS31410;Note=internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313371.1;locus_tag=AC00_RS31410;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 696 1712 . - . ID=gene-AC00_RS30650;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=AC00_RS30650;old_locus_tag=AC00_4974 NZ_JJLU01000142.1 Protein Homology CDS 696 1712 . - 0 ID=cds-WP_000105848.1;Parent=gene-AC00_RS30650;Dbxref=GenBank:WP_000105848.1;Name=WP_000105848.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=AC00_RS30650;product=lipoate--protein ligase LplA;protein_id=WP_000105848.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 1740 2384 . - . ID=gene-AC00_RS30655;Name=ytjB;gbkey=Gene;gene=ytjB;gene_biotype=protein_coding;locus_tag=AC00_RS30655;old_locus_tag=AC00_4975 NZ_JJLU01000142.1 Protein Homology CDS 1740 2384 . - 0 ID=cds-WP_000124615.1;Parent=gene-AC00_RS30655;Dbxref=GenBank:WP_000124615.1;Name=WP_000124615.1;gbkey=CDS;gene=ytjB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=AC00_RS30655;product=YtjB family periplasmic protein;protein_id=WP_000124615.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 2490 3458 . + . ID=gene-AC00_RS01530;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=AC00_RS01530;old_locus_tag=AC00_4976 NZ_JJLU01000142.1 Protein Homology CDS 2490 3458 . + 0 ID=cds-WP_001132956.1;Parent=gene-AC00_RS01530;Dbxref=GenBank:WP_001132956.1;Name=WP_001132956.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=AC00_RS01530;product=phosphoserine phosphatase;protein_id=WP_001132956.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 3507 4889 . + . ID=gene-AC00_RS01525;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=AC00_RS01525;old_locus_tag=AC00_4977 NZ_JJLU01000142.1 Protein Homology CDS 3507 4889 . + 0 ID=cds-WP_001029698.1;Parent=gene-AC00_RS01525;Dbxref=GenBank:WP_001029698.1;Name=WP_001029698.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=AC00_RS01525;product=DNA repair protein RadA;protein_id=WP_001029698.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 4910 6142 . + . ID=gene-AC00_RS01520;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=AC00_RS01520;old_locus_tag=AC00_4978 NZ_JJLU01000142.1 Protein Homology CDS 4910 6142 . + 0 ID=cds-WP_000093809.1;Parent=gene-AC00_RS01520;Dbxref=GenBank:WP_000093809.1;Name=WP_000093809.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=AC00_RS01520;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_000093809.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 6176 6343 . + . ID=gene-AC00_RS30990;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=AC00_RS30990;old_locus_tag=AC00_4979 NZ_JJLU01000142.1 Protein Homology CDS 6176 6343 . + 0 ID=cds-WP_000007433.1;Parent=gene-AC00_RS30990;Dbxref=GenBank:WP_000007433.1;Name=WP_000007433.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007431.1;locus_tag=AC00_RS30990;product=NadS family protein;protein_id=WP_000007433.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 6450 8117 . - . ID=gene-AC00_RS01510;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=AC00_RS01510;old_locus_tag=AC00_4980 NZ_JJLU01000142.1 Protein Homology CDS 6450 8117 . - 0 ID=cds-WP_000046749.1;Parent=gene-AC00_RS01510;Dbxref=GenBank:WP_000046749.1;Name=WP_000046749.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=AC00_RS01510;product=energy-dependent translational throttle protein EttA;protein_id=WP_000046749.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 8328 10265 . + . ID=gene-AC00_RS01505;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=AC00_RS01505;old_locus_tag=AC00_4982 NZ_JJLU01000142.1 Protein Homology CDS 8328 10265 . + 0 ID=cds-WP_032288392.1;Parent=gene-AC00_RS01505;Dbxref=GenBank:WP_032288392.1;Name=WP_032288392.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=AC00_RS01505;product=murein transglycosylase;protein_id=WP_032288392.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 10355 10681 . + . ID=gene-AC00_RS01500;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=AC00_RS01500;old_locus_tag=AC00_4983 NZ_JJLU01000142.1 Protein Homology CDS 10355 10681 . + 0 ID=cds-WP_001399685.1;Parent=gene-AC00_RS01500;Dbxref=GenBank:WP_001399685.1;Name=WP_001399685.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418810.1;locus_tag=AC00_RS01500;product=trp operon repressor;protein_id=WP_001399685.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 10828 11340 . - . ID=gene-AC00_RS01495;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=AC00_RS01495;old_locus_tag=AC00_4984 NZ_JJLU01000142.1 Protein Homology CDS 10828 11340 . - 0 ID=cds-WP_001742676.1;Parent=gene-AC00_RS01495;Dbxref=GenBank:WP_001742676.1;Name=WP_001742676.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418811.2;locus_tag=AC00_RS01495;product=inosine/xanthosine triphosphatase;protein_id=WP_001742676.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 11392 12039 . + . ID=gene-AC00_RS01490;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=AC00_RS01490;old_locus_tag=AC00_4985 NZ_JJLU01000142.1 Protein Homology CDS 11392 12039 . + 0 ID=cds-WP_000942344.1;Parent=gene-AC00_RS01490;Dbxref=GenBank:WP_000942344.1;Name=WP_000942344.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313380.1;locus_tag=AC00_RS01490;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_000942344.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 12036 12905 . - . ID=gene-AC00_RS01485;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=AC00_RS01485;old_locus_tag=AC00_4986 NZ_JJLU01000142.1 Protein Homology CDS 12036 12905 . - 0 ID=cds-WP_000371666.1;Parent=gene-AC00_RS01485;Dbxref=GenBank:WP_000371666.1;Name=WP_000371666.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=AC00_RS01485;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_000371666.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 13116 13589 . + . ID=gene-AC00_RS01480;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=AC00_RS01480;old_locus_tag=AC00_4987 NZ_JJLU01000142.1 Protein Homology CDS 13116 13589 . + 0 ID=cds-WP_000875487.1;Parent=gene-AC00_RS01480;Dbxref=GenBank:WP_000875487.1;Name=WP_000875487.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313382.1;locus_tag=AC00_RS01480;product=protein CreA;protein_id=WP_000875487.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 13602 14291 . + . ID=gene-AC00_RS01475;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=AC00_RS01475;old_locus_tag=AC00_4988 NZ_JJLU01000142.1 Protein Homology CDS 13602 14291 . + 0 ID=cds-WP_032288390.1;Parent=gene-AC00_RS01475;Dbxref=GenBank:WP_032288390.1;Name=WP_032288390.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710136.1;locus_tag=AC00_RS01475;product=two-component system response regulator CreB;protein_id=WP_032288390.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 14291 15715 . + . ID=gene-AC00_RS01470;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=AC00_RS01470;old_locus_tag=AC00_4989 NZ_JJLU01000142.1 Protein Homology CDS 14291 15715 . + 0 ID=cds-WP_032282081.1;Parent=gene-AC00_RS01470;Dbxref=GenBank:WP_032282081.1;Name=WP_032282081.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313384.1;locus_tag=AC00_RS01470;product=two-component system sensor histidine kinase CreC;protein_id=WP_032282081.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 15773 17125 . + . ID=gene-AC00_RS01465;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=AC00_RS01465;old_locus_tag=AC00_4990 NZ_JJLU01000142.1 Protein Homology CDS 15773 17125 . + 0 ID=cds-WP_032282083.1;Parent=gene-AC00_RS01465;Dbxref=GenBank:WP_032282083.1;Name=WP_032282083.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313385.1;locus_tag=AC00_RS01465;product=cell envelope integrity protein CreD;protein_id=WP_032282083.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 17185 17901 . - . ID=gene-AC00_RS01460;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=AC00_RS01460;old_locus_tag=AC00_4991 NZ_JJLU01000142.1 Protein Homology CDS 17185 17901 . - 0 ID=cds-WP_001194358.1;Parent=gene-AC00_RS01460;Dbxref=GenBank:WP_001194358.1;Name=WP_001194358.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=AC00_RS01460;product=two-component system response regulator ArcA;protein_id=WP_001194358.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 17997 18137 . + . ID=gene-AC00_RS0126065;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=AC00_RS0126065 NZ_JJLU01000142.1 Protein Homology CDS 17997 18137 . + 0 ID=cds-WP_001303782.1;Parent=gene-AC00_RS0126065;Dbxref=GenBank:WP_001303782.1;Name=WP_001303782.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=AC00_RS0126065;product=protein YjjY;protein_id=WP_001303782.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 18537 19223 . + . ID=gene-AC00_RS01455;Name=yjtD;gbkey=Gene;gene=yjtD;gene_biotype=protein_coding;locus_tag=AC00_RS01455;old_locus_tag=AC00_4992 NZ_JJLU01000142.1 Protein Homology CDS 18537 19223 . + 0 ID=cds-WP_001223166.1;Parent=gene-AC00_RS01455;Dbxref=GenBank:WP_001223166.1;Name=WP_001223166.1;gbkey=CDS;gene=yjtD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313388.1;locus_tag=AC00_RS01455;product=tRNA/rRNA methyltransferase;protein_id=WP_001223166.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 19437 19502 . + . ID=gene-AC00_RS0126070;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=AC00_RS0126070 NZ_JJLU01000142.1 Protein Homology CDS 19437 19502 . + 0 ID=cds-WP_001386572.1;Parent=gene-AC00_RS0126070;Dbxref=GenBank:WP_001386572.1;Name=WP_001386572.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=AC00_RS0126070;product=thr operon leader peptide;protein_id=WP_001386572.1;transl_table=11 NZ_JJLU01000142.1 cmsearch sequence_feature 19438 19557 . + . ID=id-NZ_JJLU01000142.1:19438..19557;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLU01000142.1 RefSeq gene 19583 22045 . + . ID=gene-AC00_RS01450;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AC00_RS01450;old_locus_tag=AC00_4993 NZ_JJLU01000142.1 Protein Homology CDS 19583 22045 . + 0 ID=cds-WP_032288393.1;Parent=gene-AC00_RS01450;Dbxref=GenBank:WP_032288393.1;Name=WP_032288393.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=AC00_RS01450;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_032288393.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 22047 22979 . + . ID=gene-AC00_RS01445;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=AC00_RS01445;old_locus_tag=AC00_4994 NZ_JJLU01000142.1 Protein Homology CDS 22047 22979 . + 0 ID=cds-WP_000241660.1;Parent=gene-AC00_RS01445;Dbxref=GenBank:WP_000241660.1;Name=WP_000241660.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308030.1;locus_tag=AC00_RS01445;product=homoserine kinase;protein_id=WP_000241660.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 22980 24266 . + . ID=gene-AC00_RS01440;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=AC00_RS01440;old_locus_tag=AC00_4995 NZ_JJLU01000142.1 Protein Homology CDS 22980 24266 . + 0 ID=cds-WP_000781063.1;Parent=gene-AC00_RS01440;Dbxref=GenBank:WP_000781063.1;Name=WP_000781063.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308031.1;locus_tag=AC00_RS01440;product=threonine synthase;protein_id=WP_000781063.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 24480 24776 . + . ID=gene-AC00_RS0126080;Name=yaaX;gbkey=Gene;gene=yaaX;gene_biotype=protein_coding;locus_tag=AC00_RS0126080 NZ_JJLU01000142.1 Protein Homology CDS 24480 24776 . + 0 ID=cds-WP_032282084.1;Parent=gene-AC00_RS0126080;Dbxref=GenBank:WP_032282084.1;Name=WP_032282084.1;gbkey=CDS;gene=yaaX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308032.1;locus_tag=AC00_RS0126080;product=DUF2502 domain-containing protein;protein_id=WP_032282084.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 24929 25705 . - . ID=gene-AC00_RS01435;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=AC00_RS01435;old_locus_tag=AC00_4997 NZ_JJLU01000142.1 Protein Homology CDS 24929 25705 . - 0 ID=cds-WP_000906203.1;Parent=gene-AC00_RS01435;Dbxref=GenBank:WP_000906203.1;Name=WP_000906203.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308033.1;locus_tag=AC00_RS01435;product=peroxide stress protein YaaA;protein_id=WP_000906203.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 25775 27205 . - . ID=gene-AC00_RS01430;Name=yaaJ;gbkey=Gene;gene=yaaJ;gene_biotype=protein_coding;locus_tag=AC00_RS01430;old_locus_tag=AC00_4998 NZ_JJLU01000142.1 Protein Homology CDS 25775 27205 . - 0 ID=cds-WP_032288391.1;Parent=gene-AC00_RS01430;Dbxref=GenBank:WP_032288391.1;Name=WP_032288391.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;gene=yaaJ;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308034.1;locus_tag=AC00_RS01430;product=alanine/glycine:cation symporter family protein;protein_id=WP_032288391.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 27484 28437 . + . ID=gene-AC00_RS01425;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=AC00_RS01425;old_locus_tag=AC00_4999 NZ_JJLU01000142.1 Protein Homology CDS 27484 28437 . + 0 ID=cds-WP_000130185.1;Parent=gene-AC00_RS01425;Dbxref=GenBank:WP_000130185.1;Name=WP_000130185.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308035.1;locus_tag=AC00_RS01425;product=transaldolase;protein_id=WP_000130185.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 28552 29139 . + . ID=gene-AC00_RS01420;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=AC00_RS01420;old_locus_tag=AC00_5000 NZ_JJLU01000142.1 Protein Homology CDS 28552 29139 . + 0 ID=cds-WP_001295414.1;Parent=gene-AC00_RS01420;Dbxref=GenBank:WP_001295414.1;Name=WP_001295414.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308036.1;locus_tag=AC00_RS01420;product=molybdopterin adenylyltransferase;protein_id=WP_001295414.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 29174 29740 . - . ID=gene-AC00_RS01415;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=AC00_RS01415;old_locus_tag=AC00_5001 NZ_JJLU01000142.1 Protein Homology CDS 29174 29740 . - 0 ID=cds-WP_032282086.1;Parent=gene-AC00_RS01415;Dbxref=GenBank:WP_032282086.1;Name=WP_032282086.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=AC00_RS01415;product=acetate uptake transporter;protein_id=WP_032282086.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 29889 30602 . - . ID=gene-AC00_RS01410;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=AC00_RS01410;old_locus_tag=AC00_5002 NZ_JJLU01000142.1 Protein Homology CDS 29889 30602 . - 0 ID=cds-WP_001102367.1;Parent=gene-AC00_RS01410;Dbxref=GenBank:WP_001102367.1;Name=WP_001102367.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414552.1;locus_tag=AC00_RS01410;product=acidic protein MsyB;protein_id=WP_001102367.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 30628 31032 . - . ID=gene-AC00_RS01405;Name=yaaI;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=AC00_RS01405;old_locus_tag=AC00_5003 NZ_JJLU01000142.1 Protein Homology CDS 30628 31032 . - 0 ID=cds-WP_001520432.1;Parent=gene-AC00_RS01405;Dbxref=GenBank:WP_001520432.1;Name=WP_001520432.1;gbkey=CDS;gene=yaaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_705972.1;locus_tag=AC00_RS01405;product=DUF2541 family protein;protein_id=WP_001520432.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 31409 33325 . + . ID=gene-AC00_RS01400;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AC00_RS01400;old_locus_tag=AC00_5004 NZ_JJLU01000142.1 Protein Homology CDS 31409 33325 . + 0 ID=cds-WP_000516135.1;Parent=gene-AC00_RS01400;Dbxref=GenBank:WP_000516135.1;Name=WP_000516135.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=AC00_RS01400;product=molecular chaperone DnaK;protein_id=WP_000516135.1;transl_table=11 NZ_JJLU01000142.1 RefSeq gene 33414 34544 . + . ID=gene-AC00_RS01395;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AC00_RS01395;old_locus_tag=AC00_5005 NZ_JJLU01000142.1 Protein Homology CDS 33414 34544 . + 0 ID=cds-WP_032282087.1;Parent=gene-AC00_RS01395;Dbxref=GenBank:WP_032282087.1;Name=WP_032282087.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308042.1;locus_tag=AC00_RS01395;product=molecular chaperone DnaJ;protein_id=WP_032282087.1;transl_table=11 NZ_JJLU01000142.1 RefSeq pseudogene 34807 34953 . - . ID=gene-AC00_RS01390;Name=AC00_RS01390;end_range=34953,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01390;old_locus_tag=AC00_5006;partial=true;pseudo=true NZ_JJLU01000142.1 Protein Homology CDS 34807 34953 . - 0 ID=cds-AC00_RS01390;Parent=gene-AC00_RS01390;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=34953,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS01390;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000143.1 1 305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000143.1 RefSeq region 1 305 . + . ID=NZ_JJLU01000143.1:1..305;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000143.1 RefSeq pseudogene 1 305 . - . ID=gene-AC00_RS28765;Name=pla;end_range=305,.;gbkey=Gene;gene=pla;gene_biotype=pseudogene;locus_tag=AC00_RS28765;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000143.1 Protein Homology CDS 1 305 . - 2 ID=cds-AC00_RS28765;Parent=gene-AC00_RS28765;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=305,.;gbkey=CDS;gene=pla;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461336.1;locus_tag=AC00_RS28765;partial=true;product=omptin family plasminogen activator Pla;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000144.1 1 2037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000144.1 RefSeq region 1 2037 . + . ID=NZ_JJLU01000144.1:1..2037;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000144.1 RefSeq gene 1 1025 . + . ID=gene-AC00_RS01385;Name=AC00_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01385;old_locus_tag=AC00_5007;partial=true;start_range=.,1 NZ_JJLU01000144.1 Protein Homology CDS 1 1025 . + 2 ID=cds-WP_032173284.1;Parent=gene-AC00_RS01385;Dbxref=GenBank:WP_032173284.1;Name=WP_032173284.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007767120.1;locus_tag=AC00_RS01385;partial=true;product=leucyl aminopeptidase;protein_id=WP_032173284.1;start_range=.,1;transl_table=11 NZ_JJLU01000144.1 RefSeq gene 1379 1822 . + . ID=gene-AC00_RS01380;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=AC00_RS01380;old_locus_tag=AC00_5008 NZ_JJLU01000144.1 Protein Homology CDS 1379 1822 . + 0 ID=cds-WP_000786399.1-2;Parent=gene-AC00_RS01380;Dbxref=GenBank:WP_000786399.1;Name=WP_000786399.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=AC00_RS01380;product=DNA polymerase III subunit chi;protein_id=WP_000786399.1;transl_table=11 NZ_JJLU01000144.1 RefSeq gene 1822 2037 . + . ID=gene-AC00_RS01375;Name=AC00_RS01375;end_range=2037,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01375;old_locus_tag=AC00_5009;partial=true NZ_JJLU01000144.1 Protein Homology CDS 1822 2037 . + 0 ID=cds-WP_001479925.1;Parent=gene-AC00_RS01375;Dbxref=GenBank:WP_001479925.1;Name=WP_001479925.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;end_range=2037,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=AC00_RS01375;partial=true;product=class I tRNA ligase family protein;protein_id=WP_001479925.1;transl_table=11 ##sequence-region NZ_JJLU01000145.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000145.1 RefSeq region 1 2047 . + . ID=NZ_JJLU01000145.1:1..2047;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000145.1 RefSeq gene 1 777 . + . ID=gene-AC00_RS30995;Name=ycdU;gbkey=Gene;gene=ycdU;gene_biotype=protein_coding;locus_tag=AC00_RS30995;partial=true;start_range=.,1 NZ_JJLU01000145.1 Protein Homology CDS 1 777 . + 0 ID=cds-WP_050438636.1-2;Parent=gene-AC00_RS30995;Dbxref=GenBank:WP_050438636.1;Name=WP_050438636.1;gbkey=CDS;gene=ycdU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309325.1;locus_tag=AC00_RS30995;partial=true;product=protein YcdU;protein_id=WP_050438636.1;start_range=.,1;transl_table=11 NZ_JJLU01000145.1 RefSeq gene 1324 2047 . + . ID=gene-AC00_RS01370;Name=AC00_RS01370;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01370;old_locus_tag=AC00_5011;partial=true NZ_JJLU01000145.1 Protein Homology CDS 1324 2047 . + 0 ID=cds-WP_032280710.1;Parent=gene-AC00_RS01370;Dbxref=GenBank:WP_032280710.1;Name=WP_032280710.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=2047,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309326.1;locus_tag=AC00_RS01370;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_032280710.1;transl_table=11 ##sequence-region NZ_JJLU01000146.1 1 1805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000146.1 RefSeq region 1 1805 . + . ID=NZ_JJLU01000146.1:1..1805;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000146.1 RefSeq gene 1 194 . + . ID=gene-AC00_RS0126095;Name=AC00_RS0126095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126095;partial=true;start_range=.,1 NZ_JJLU01000146.1 Protein Homology CDS 1 194 . + 2 ID=cds-WP_024202539.1;Parent=gene-AC00_RS0126095;Dbxref=GenBank:WP_024202539.1;Name=WP_024202539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC00_RS0126095;partial=true;product=transposase domain-containing protein;protein_id=WP_024202539.1;start_range=.,1;transl_table=11 NZ_JJLU01000146.1 RefSeq pseudogene 233 601 . + . ID=gene-AC00_RS01365;Name=AC00_RS01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01365;old_locus_tag=AC00_5012;partial=true;pseudo=true;start_range=.,233 NZ_JJLU01000146.1 Protein Homology CDS 233 601 . + 0 ID=cds-AC00_RS01365;Parent=gene-AC00_RS01365;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC00_RS01365;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,233;transl_table=11 NZ_JJLU01000146.1 RefSeq gene 648 1175 . - . ID=gene-AC00_RS01360;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=AC00_RS01360;old_locus_tag=AC00_5013 NZ_JJLU01000146.1 Protein Homology CDS 648 1175 . - 0 ID=cds-WP_032250688.1;Parent=gene-AC00_RS01360;Dbxref=GenBank:WP_032250688.1;Name=WP_032250688.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455977.1;locus_tag=AC00_RS01360;product=superoxide dismutase family protein;protein_id=WP_032250688.1;transl_table=11 NZ_JJLU01000146.1 RefSeq pseudogene 1363 1467 . + . ID=gene-AC00_RS31415;Name=AC00_RS31415;end_range=1467,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31415;partial=true;pseudo=true NZ_JJLU01000146.1 Protein Homology CDS 1363 1467 . + 0 ID=cds-AC00_RS31415;Parent=gene-AC00_RS31415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1467,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460023.1;locus_tag=AC00_RS31415;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000146.1 RefSeq gene 1598 1805 . + . ID=gene-AC00_RS01355;Name=AC00_RS01355;end_range=1805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01355;old_locus_tag=AC00_5014;partial=true NZ_JJLU01000146.1 Protein Homology CDS 1598 1805 . + 0 ID=cds-WP_032236708.1-2;Parent=gene-AC00_RS01355;Dbxref=GenBank:WP_032236708.1;Name=WP_032236708.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1805,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010904653.1;locus_tag=AC00_RS01355;partial=true;product=transposase;protein_id=WP_032236708.1;transl_table=11 ##sequence-region NZ_JJLU01000147.1 1 3874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000147.1 RefSeq region 1 3874 . + . ID=NZ_JJLU01000147.1:1..3874;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000147.1 RefSeq pseudogene 1 224 . + . ID=gene-AC00_RS01350;Name=AC00_RS01350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01350;old_locus_tag=AC00_5015;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000147.1 Protein Homology CDS 1 224 . + 2 ID=cds-AC00_RS01350;Parent=gene-AC00_RS01350;Note=RepA%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AC00_RS01350;partial=true;product=incFII family plasmid replication initiator RepA;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000147.1 RefSeq gene 925 1065 . + . ID=gene-AC00_RS31000;Name=AC00_RS31000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31000;old_locus_tag=AC00_5016 NZ_JJLU01000147.1 Protein Homology CDS 925 1065 . + 0 ID=cds-WP_001333237.1;Parent=gene-AC00_RS31000;Dbxref=GenBank:WP_001333237.1;Name=WP_001333237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004031751.1;locus_tag=AC00_RS31000;product=hypothetical protein;protein_id=WP_001333237.1;transl_table=11 NZ_JJLU01000147.1 RefSeq gene 1163 1816 . + . ID=gene-AC00_RS01345;Name=AC00_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01345;old_locus_tag=AC00_5018 NZ_JJLU01000147.1 Protein Homology CDS 1163 1816 . + 0 ID=cds-WP_000616807.1;Parent=gene-AC00_RS01345;Dbxref=GenBank:WP_000616807.1;Name=WP_000616807.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001757010.1;locus_tag=AC00_RS01345;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_000616807.1;transl_table=11 NZ_JJLU01000147.1 RefSeq gene 1909 2166 . + . ID=gene-AC00_RS30665;Name=pemI;gbkey=Gene;gene=pemI;gene_biotype=protein_coding;locus_tag=AC00_RS30665;old_locus_tag=AC00_5019 NZ_JJLU01000147.1 Protein Homology CDS 1909 2166 . + 0 ID=cds-WP_000557619.1;Parent=gene-AC00_RS30665;Dbxref=GenBank:WP_000557619.1;Name=WP_000557619.1;gbkey=CDS;gene=pemI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000557619.1;locus_tag=AC00_RS30665;product=type II toxin-antitoxin system antitoxin PemI;protein_id=WP_000557619.1;transl_table=11 NZ_JJLU01000147.1 RefSeq gene 2168 2500 . + . ID=gene-AC00_RS01335;Name=pemK-mt;gbkey=Gene;gene=pemK-mt;gene_biotype=protein_coding;locus_tag=AC00_RS01335;old_locus_tag=AC00_5020 NZ_JJLU01000147.1 Protein Homology CDS 2168 2500 . + 0 ID=cds-WP_000439434.1;Parent=gene-AC00_RS01335;Dbxref=GenBank:WP_000439434.1;Name=WP_000439434.1;gbkey=CDS;gene=pemK-mt;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206891.1;locus_tag=AC00_RS01335;product=type II toxin-antitoxin system toxin endoribonuclease PemK-mt;protein_id=WP_000439434.1;transl_table=11 NZ_JJLU01000147.1 RefSeq gene 2896 3330 . - . ID=gene-AC00_RS01330;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=AC00_RS01330;old_locus_tag=AC00_5021 NZ_JJLU01000147.1 Protein Homology CDS 2896 3330 . - 0 ID=cds-WP_032282339.1;Parent=gene-AC00_RS01330;Dbxref=GenBank:WP_032282339.1;Name=WP_032282339.1;Ontology_term=GO:0006355,GO:0046689,GO:0003677,GO:0045340;gbkey=CDS;gene=merR;go_function=DNA binding|0003677||IEA,mercury ion binding|0045340||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429833.1;locus_tag=AC00_RS01330;product=Hg(II)-responsive transcriptional regulator;protein_id=WP_032282339.1;transl_table=11 NZ_JJLU01000147.1 RefSeq pseudogene 3402 3491 . + . ID=gene-AC00_RS28780;Name=AC00_RS28780;end_range=3491,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28780;partial=true;pseudo=true NZ_JJLU01000147.1 Protein Homology CDS 3402 3491 . + 0 ID=cds-AC00_RS28780;Parent=gene-AC00_RS28780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=3491,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011111453.1;locus_tag=AC00_RS28780;partial=true;product=mercuric transporter MerT family protein;pseudo=true;transl_table=11 NZ_JJLU01000147.1 RefSeq gene 3525 3874 . - . ID=gene-AC00_RS0126100;Name=AC00_RS0126100;end_range=3874,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126100;partial=true NZ_JJLU01000147.1 Protein Homology CDS 3525 3874 . - 2 ID=cds-WP_032288399.1;Parent=gene-AC00_RS0126100;Dbxref=GenBank:WP_032288399.1;Name=WP_032288399.1;Ontology_term=GO:0006313,GO:0004803;end_range=3874,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1;locus_tag=AC00_RS0126100;partial=true;product=Tn3 family transposase;protein_id=WP_032288399.1;transl_table=11 ##sequence-region NZ_JJLU01000148.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000148.1 RefSeq region 1 318 . + . ID=NZ_JJLU01000148.1:1..318;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000148.1 RefSeq pseudogene 1 318 . + . ID=gene-AC00_RS01325;Name=AC00_RS01325;end_range=318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01325;old_locus_tag=AC00_5023;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000148.1 Protein Homology CDS 1 318 . + 0 ID=cds-AC00_RS01325;Parent=gene-AC00_RS01325;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=318,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611465.1;locus_tag=AC00_RS01325;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000148.1 cmsearch sequence_feature 255 318 . + . ID=id-AC00_RS01325;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;end_range=318,.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS01325;partial=true;pseudo=true ##sequence-region NZ_JJLU01000149.1 1 11738 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000149.1 RefSeq region 1 11738 . + . ID=NZ_JJLU01000149.1:1..11738;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000149.1 RefSeq pseudogene 161 324 . - . ID=gene-AC00_RS31420;Name=AC00_RS31420;end_range=324,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31420;partial=true;pseudo=true NZ_JJLU01000149.1 Protein Homology CDS 161 324 . - 0 ID=cds-AC00_RS31420;Parent=gene-AC00_RS31420;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=324,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858335.1;locus_tag=AC00_RS31420;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 666 1637 . - . ID=gene-AC00_RS01315;Name=AC00_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01315;old_locus_tag=AC00_5025 NZ_JJLU01000149.1 Protein Homology CDS 666 1637 . - 0 ID=cds-WP_032250359.1;Parent=gene-AC00_RS01315;Dbxref=GenBank:WP_032250359.1;Name=WP_032250359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817027.1;locus_tag=AC00_RS01315;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_032250359.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 1637 2803 . - . ID=gene-AC00_RS01310;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=AC00_RS01310;old_locus_tag=AC00_5026 NZ_JJLU01000149.1 Protein Homology CDS 1637 2803 . - 0 ID=cds-WP_032250356.1;Parent=gene-AC00_RS01310;Dbxref=GenBank:WP_032250356.1;Name=WP_032250356.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=AC00_RS01310;product=plasmid-partitioning protein SopA;protein_id=WP_032250356.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 3077 4108 . + . ID=gene-AC00_RS0126105;Name=AC00_RS0126105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126105;old_locus_tag=AC00_5028 NZ_JJLU01000149.1 Protein Homology CDS 3077 4108 . + 0 ID=cds-WP_032282342.1;Parent=gene-AC00_RS0126105;Dbxref=GenBank:WP_032282342.1;Name=WP_032282342.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011787828.1;locus_tag=AC00_RS0126105;product=IS630 family transposase;protein_id=WP_032282342.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 4410 5417 . + . ID=gene-AC00_RS01305;Name=AC00_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01305;old_locus_tag=AC00_5029 NZ_JJLU01000149.1 Protein Homology CDS 4410 5417 . + 0 ID=cds-WP_159381325.1;Parent=gene-AC00_RS01305;Dbxref=GenBank:WP_159381325.1;Name=WP_159381325.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014717.6;locus_tag=AC00_RS01305;product=ABC transporter permease;protein_id=WP_159381325.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 5414 6622 . + . ID=gene-AC00_RS01300;Name=AC00_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01300;old_locus_tag=AC00_5030 NZ_JJLU01000149.1 Protein Homology CDS 5414 6622 . + 0 ID=cds-WP_032250349.1;Parent=gene-AC00_RS01300;Dbxref=GenBank:WP_032250349.1;Name=WP_032250349.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=AC00_RS01300;product=TolC family protein;protein_id=WP_032250349.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 6585 7358 . + . ID=gene-AC00_RS01295;Name=AC00_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01295;old_locus_tag=AC00_5031 NZ_JJLU01000149.1 GeneMarkS-2+ CDS 6585 7358 . + 0 ID=cds-WP_143370820.1;Parent=gene-AC00_RS01295;Dbxref=GenBank:WP_143370820.1;Name=WP_143370820.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS01295;product=hypothetical protein;protein_id=WP_143370820.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 7351 7983 . + . ID=gene-AC00_RS0126110;Name=AC00_RS0126110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126110;old_locus_tag=AC00_5032 NZ_JJLU01000149.1 Protein Homology CDS 7351 7983 . + 0 ID=cds-WP_032237875.1;Parent=gene-AC00_RS0126110;Dbxref=GenBank:WP_032237875.1;Name=WP_032237875.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001575727.1;locus_tag=AC00_RS0126110;product=ATP-binding cassette domain-containing protein;protein_id=WP_032237875.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 7976 9244 . + . ID=gene-AC00_RS30675;Name=AC00_RS30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30675;old_locus_tag=AC00_5033 NZ_JJLU01000149.1 GeneMarkS-2+ CDS 7976 9244 . + 0 ID=cds-WP_064735014.1;Parent=gene-AC00_RS30675;Dbxref=GenBank:WP_064735014.1;Name=WP_064735014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS30675;product=hypothetical protein;protein_id=WP_064735014.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 10092 10460 . + . ID=gene-AC00_RS26680;Name=AC00_RS26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26680 NZ_JJLU01000149.1 GeneMarkS-2+ CDS 10092 10460 . + 0 ID=cds-WP_050438676.1;Parent=gene-AC00_RS26680;Dbxref=GenBank:WP_050438676.1;Name=WP_050438676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS26680;product=hypothetical protein;protein_id=WP_050438676.1;transl_table=11 NZ_JJLU01000149.1 RefSeq gene 10642 11738 . - . ID=gene-AC00_RS29990;Name=AC00_RS29990;end_range=11738,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29990;old_locus_tag=AC00_5036;partial=true NZ_JJLU01000149.1 Protein Homology CDS 10642 11738 . - 2 ID=cds-WP_032288402.1;Parent=gene-AC00_RS29990;Dbxref=GenBank:WP_032288402.1;Name=WP_032288402.1;Ontology_term=GO:0006313,GO:0004803;end_range=11738,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC00_RS29990;partial=true;product=IS66-like element ISEc43 family transposase;protein_id=WP_032288402.1;transl_table=11 ##sequence-region NZ_JJLU01000150.1 1 367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000150.1 RefSeq region 1 367 . + . ID=NZ_JJLU01000150.1:1..367;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000150.1 RefSeq gene 185 367 . + . ID=gene-AC00_RS01280;Name=AC00_RS01280;end_range=367,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01280;old_locus_tag=AC00_5037;partial=true NZ_JJLU01000150.1 Protein Homology CDS 185 367 . + 0 ID=cds-WP_032288404.1;Parent=gene-AC00_RS01280;Dbxref=GenBank:WP_032288404.1;Name=WP_032288404.1;end_range=367,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000137438.1;locus_tag=AC00_RS01280;partial=true;product=MbeD family mobilization/exclusion protein;protein_id=WP_032288404.1;transl_table=11 ##sequence-region NZ_JJLU01000151.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000151.1 RefSeq region 1 2047 . + . ID=NZ_JJLU01000151.1:1..2047;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000151.1 RefSeq gene 1 2017 . + . ID=gene-AC00_RS01275;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AC00_RS01275;old_locus_tag=AC00_5039;partial=true;start_range=.,1 NZ_JJLU01000151.1 Protein Homology CDS 1 2017 . + 1 ID=cds-WP_032288407.1;Parent=gene-AC00_RS01275;Dbxref=GenBank:WP_032288407.1;Name=WP_032288407.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AC00_RS01275;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_032288407.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000152.1 1 4683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000152.1 RefSeq region 1 4683 . + . ID=NZ_JJLU01000152.1:1..4683;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000152.1 RefSeq pseudogene 1 323 . + . ID=gene-AC00_RS0126125;Name=AC00_RS0126125;end_range=323,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0126125;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000152.1 Protein Homology CDS 1 323 . + 2 ID=cds-AC00_RS0126125;Parent=gene-AC00_RS0126125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=323,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS0126125;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000152.1 RefSeq gene 359 3310 . - . ID=gene-AC00_RS26820;Name=AC00_RS26820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26820;old_locus_tag=AC00_5041 NZ_JJLU01000152.1 Protein Homology CDS 359 3310 . - 0 ID=cds-WP_071999293.1;Parent=gene-AC00_RS26820;Dbxref=GenBank:WP_071999293.1;Name=WP_071999293.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008826.1;locus_tag=AC00_RS26820;product=Tn3 family transposase;protein_id=WP_071999293.1;transl_table=11 NZ_JJLU01000152.1 RefSeq pseudogene 3291 3914 . - . ID=gene-AC00_RS0126130;Name=AC00_RS0126130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0126130;pseudo=true NZ_JJLU01000152.1 Protein Homology CDS 3291 3914 . - 0 ID=cds-AC00_RS0126130;Parent=gene-AC00_RS0126130;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000904945.1;locus_tag=AC00_RS0126130;product=recombinase family protein;pseudo=true;transl_table=11 NZ_JJLU01000152.1 RefSeq gene 4545 4683 . + . ID=gene-AC00_RS29995;Name=AC00_RS29995;end_range=4683,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29995;old_locus_tag=AC00_5044;partial=true NZ_JJLU01000152.1 Protein Homology CDS 4545 4683 . + 0 ID=cds-WP_077757337.1-2;Parent=gene-AC00_RS29995;Dbxref=GenBank:WP_077757337.1;Name=WP_077757337.1;end_range=4683,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241516.1;locus_tag=AC00_RS29995;partial=true;product=reverse transcriptase;protein_id=WP_077757337.1;transl_table=11 ##sequence-region NZ_JJLU01000153.1 1 348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000153.1 RefSeq region 1 348 . + . ID=NZ_JJLU01000153.1:1..348;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000153.1 RefSeq gene 132 247 . + . ID=gene-AC00_RS01265;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS01265;old_locus_tag=AC00_5045 NZ_JJLU01000153.1 cmsearch rRNA 132 247 . + . ID=rna-AC00_RS01265;Parent=gene-AC00_RS01265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS01265;product=5S ribosomal RNA NZ_JJLU01000153.1 cmsearch exon 132 247 . + . ID=exon-AC00_RS01265-1;Parent=rna-AC00_RS01265;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS01265;product=5S ribosomal RNA ##sequence-region NZ_JJLU01000154.1 1 529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000154.1 RefSeq region 1 529 . + . ID=NZ_JJLU01000154.1:1..529;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000154.1 RefSeq gene 1 256 . + . ID=gene-AC00_RS01260;Name=AC00_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01260;old_locus_tag=AC00_5046;partial=true;start_range=.,1 NZ_JJLU01000154.1 Protein Homology CDS 1 256 . + 1 ID=cds-WP_148725570.1;Parent=gene-AC00_RS01260;Dbxref=GenBank:WP_148725570.1;Name=WP_148725570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611684.1;locus_tag=AC00_RS01260;partial=true;product=transposase domain-containing protein;protein_id=WP_148725570.1;start_range=.,1;transl_table=11 NZ_JJLU01000154.1 RefSeq pseudogene 281 529 . - . ID=gene-AC00_RS01255;Name=AC00_RS01255;end_range=529,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01255;old_locus_tag=AC00_5047;partial=true;pseudo=true;start_range=.,281 NZ_JJLU01000154.1 Protein Homology CDS 281 529 . - 0 ID=cds-AC00_RS01255;Parent=gene-AC00_RS01255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=529,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC00_RS01255;partial=true;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;start_range=.,281;transl_table=11 ##sequence-region NZ_JJLU01000155.1 1 42467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000155.1 RefSeq region 1 42467 . + . ID=NZ_JJLU01000155.1:1..42467;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000155.1 RefSeq pseudogene 146 319 . - . ID=gene-AC00_RS31425;Name=AC00_RS31425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31425;partial=true;pseudo=true;start_range=.,146 NZ_JJLU01000155.1 Protein Homology CDS 146 319 . - 0 ID=cds-AC00_RS31425;Parent=gene-AC00_RS31425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AC00_RS31425;partial=true;product=hypothetical protein;pseudo=true;start_range=.,146;transl_table=11 NZ_JJLU01000155.1 RefSeq pseudogene 387 592 . + . ID=gene-AC00_RS31775;Name=AC00_RS31775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31775;pseudo=true NZ_JJLU01000155.1 Protein Homology CDS 387 592 . + 0 ID=cds-AC00_RS31775;Parent=gene-AC00_RS31775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AC00_RS31775;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 617 904 . + . ID=gene-AC00_RS01250;Name=AC00_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01250;old_locus_tag=AC00_5048 NZ_JJLU01000155.1 Protein Homology CDS 617 904 . + 0 ID=cds-WP_000107537.1;Parent=gene-AC00_RS01250;Dbxref=GenBank:WP_000107537.1;Name=WP_000107537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001825190.1;locus_tag=AC00_RS01250;product=hypothetical protein;protein_id=WP_000107537.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 1026 1847 . + . ID=gene-AC00_RS01245;Name=AC00_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01245;old_locus_tag=AC00_5049 NZ_JJLU01000155.1 Protein Homology CDS 1026 1847 . + 0 ID=cds-WP_001234469.1;Parent=gene-AC00_RS01245;Dbxref=GenBank:WP_001234469.1;Name=WP_001234469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001234456.1;locus_tag=AC00_RS01245;product=DUF932 domain-containing protein;protein_id=WP_001234469.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 2144 2791 . - . ID=gene-AC00_RS01240;Name=AC00_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01240;old_locus_tag=AC00_5050 NZ_JJLU01000155.1 Protein Homology CDS 2144 2791 . - 0 ID=cds-WP_000614282.1;Parent=gene-AC00_RS01240;Dbxref=GenBank:WP_000614282.1;Name=WP_000614282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000243715.1;locus_tag=AC00_RS01240;product=transglycosylase SLT domain-containing protein;protein_id=WP_000614282.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 3077 3460 . + . ID=gene-AC00_RS0126150;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=AC00_RS0126150 NZ_JJLU01000155.1 Protein Homology CDS 3077 3460 . + 0 ID=cds-WP_001151564.1;Parent=gene-AC00_RS0126150;Dbxref=GenBank:WP_001151564.1;Name=WP_001151564.1;Ontology_term=GO:0003677;gbkey=CDS;gene=traM;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151562.1;locus_tag=AC00_RS0126150;product=conjugal transfer relaxosome DNA-binding protein TraM;protein_id=WP_001151564.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 3654 4340 . + . ID=gene-AC00_RS01235;Name=AC00_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01235;old_locus_tag=AC00_5052 NZ_JJLU01000155.1 Protein Homology CDS 3654 4340 . + 0 ID=cds-WP_000332487.1;Parent=gene-AC00_RS01235;Dbxref=GenBank:WP_000332487.1;Name=WP_000332487.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001589401.1;locus_tag=AC00_RS01235;product=PAS domain-containing protein;protein_id=WP_000332487.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 4434 4661 . + . ID=gene-AC00_RS0126155;Name=traY;gbkey=Gene;gene=traY;gene_biotype=protein_coding;locus_tag=AC00_RS0126155;old_locus_tag=AC00_5053 NZ_JJLU01000155.1 Protein Homology CDS 4434 4661 . + 0 ID=cds-WP_001254388.1;Parent=gene-AC00_RS0126155;Dbxref=GenBank:WP_001254388.1;Name=WP_001254388.1;gbkey=CDS;gene=traY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001254388.1;locus_tag=AC00_RS0126155;product=conjugal transfer relaxosome protein TraY;protein_id=WP_001254388.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 4695 5057 . + . ID=gene-AC00_RS01230;Name=traA;gbkey=Gene;gene=traA;gene_biotype=protein_coding;locus_tag=AC00_RS01230;old_locus_tag=AC00_5054 NZ_JJLU01000155.1 Protein Homology CDS 4695 5057 . + 0 ID=cds-WP_001098998.1;Parent=gene-AC00_RS01230;Dbxref=GenBank:WP_001098998.1;Name=WP_001098998.1;gbkey=CDS;gene=traA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001668211.1;locus_tag=AC00_RS01230;product=type IV conjugative transfer system pilin TraA;protein_id=WP_001098998.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 5062 5373 . + . ID=gene-AC00_RS01225;Name=traL;gbkey=Gene;gene=traL;gene_biotype=protein_coding;locus_tag=AC00_RS01225;old_locus_tag=AC00_5055 NZ_JJLU01000155.1 Protein Homology CDS 5062 5373 . + 0 ID=cds-WP_000012106.1;Parent=gene-AC00_RS01225;Dbxref=GenBank:WP_000012106.1;Name=WP_000012106.1;gbkey=CDS;gene=traL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490564.1;locus_tag=AC00_RS01225;product=type IV conjugative transfer system protein TraL;protein_id=WP_000012106.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 5395 5961 . + . ID=gene-AC00_RS01220;Name=traE;gbkey=Gene;gene=traE;gene_biotype=protein_coding;locus_tag=AC00_RS01220;old_locus_tag=AC00_5056 NZ_JJLU01000155.1 Protein Homology CDS 5395 5961 . + 0 ID=cds-WP_000399805.1;Parent=gene-AC00_RS01220;Dbxref=GenBank:WP_000399805.1;Name=WP_000399805.1;gbkey=CDS;gene=traE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490565.1;locus_tag=AC00_RS01220;product=type IV conjugative transfer system protein TraE;protein_id=WP_000399805.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 5948 6676 . + . ID=gene-AC00_RS01215;Name=traK;gbkey=Gene;gene=traK;gene_biotype=protein_coding;locus_tag=AC00_RS01215;old_locus_tag=AC00_5057 NZ_JJLU01000155.1 Protein Homology CDS 5948 6676 . + 0 ID=cds-WP_001230787.1;Parent=gene-AC00_RS01215;Dbxref=GenBank:WP_001230787.1;Name=WP_001230787.1;gbkey=CDS;gene=traK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490566.1;locus_tag=AC00_RS01215;product=type-F conjugative transfer system secretin TraK;protein_id=WP_001230787.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 6676 8103 . + . ID=gene-AC00_RS01210;Name=traB;gbkey=Gene;gene=traB;gene_biotype=protein_coding;locus_tag=AC00_RS01210;old_locus_tag=AC00_5058 NZ_JJLU01000155.1 Protein Homology CDS 6676 8103 . + 0 ID=cds-WP_032282106.1;Parent=gene-AC00_RS01210;Dbxref=GenBank:WP_032282106.1;Name=WP_032282106.1;gbkey=CDS;gene=traB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553749.1;locus_tag=AC00_RS01210;product=F-type conjugal transfer pilus assembly protein TraB;protein_id=WP_032282106.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 8093 8677 . + . ID=gene-AC00_RS01205;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=AC00_RS01205;old_locus_tag=AC00_5059 NZ_JJLU01000155.1 Protein Homology CDS 8093 8677 . + 0 ID=cds-WP_000002795.1;Parent=gene-AC00_RS01205;Dbxref=GenBank:WP_000002795.1;Name=WP_000002795.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001528624.1;locus_tag=AC00_RS01205;product=conjugal transfer pilus-stabilizing protein TraP;protein_id=WP_000002795.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 8664 8984 . + . ID=gene-AC00_RS01200;Name=AC00_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01200;old_locus_tag=AC00_5060 NZ_JJLU01000155.1 Protein Homology CDS 8664 8984 . + 0 ID=cds-WP_001057302.1;Parent=gene-AC00_RS01200;Dbxref=GenBank:WP_001057302.1;Name=WP_001057302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001377845.1;locus_tag=AC00_RS01200;product=conjugal transfer protein TrbD;protein_id=WP_001057302.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 8977 9228 . + . ID=gene-AC00_RS01195;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=AC00_RS01195;old_locus_tag=AC00_5061 NZ_JJLU01000155.1 Protein Homology CDS 8977 9228 . + 0 ID=cds-WP_001038341.1;Parent=gene-AC00_RS01195;Dbxref=GenBank:WP_001038341.1;Name=WP_001038341.1;gbkey=CDS;gene=trbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001038337.1;locus_tag=AC00_RS01195;product=conjugal transfer protein TrbG;protein_id=WP_001038341.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 9225 9740 . + . ID=gene-AC00_RS01190;Name=traV;gbkey=Gene;gene=traV;gene_biotype=protein_coding;locus_tag=AC00_RS01190;old_locus_tag=AC00_5062 NZ_JJLU01000155.1 Protein Homology CDS 9225 9740 . + 0 ID=cds-WP_000809893.1;Parent=gene-AC00_RS01190;Dbxref=GenBank:WP_000809893.1;Name=WP_000809893.1;gbkey=CDS;gene=traV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233168.1;locus_tag=AC00_RS01190;product=type IV conjugative transfer system lipoprotein TraV;protein_id=WP_000809893.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 9875 10096 . + . ID=gene-AC00_RS28810;Name=traR;gbkey=Gene;gene=traR;gene_biotype=protein_coding;locus_tag=AC00_RS28810;old_locus_tag=AC00_5063 NZ_JJLU01000155.1 Protein Homology CDS 9875 10096 . + 0 ID=cds-WP_001278978.1;Parent=gene-AC00_RS28810;Dbxref=GenBank:WP_001278978.1;Name=WP_001278978.1;gbkey=CDS;gene=traR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490571.1;locus_tag=AC00_RS28810;product=conjugal transfer protein TraR;protein_id=WP_001278978.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 10256 12883 . + . ID=gene-AC00_RS01180;Name=traC;gbkey=Gene;gene=traC;gene_biotype=protein_coding;locus_tag=AC00_RS01180;old_locus_tag=AC00_5065 NZ_JJLU01000155.1 Protein Homology CDS 10256 12883 . + 0 ID=cds-WP_031943254.1;Parent=gene-AC00_RS01180;Dbxref=GenBank:WP_031943254.1;Name=WP_031943254.1;gbkey=CDS;gene=traC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064255.1;locus_tag=AC00_RS01180;product=type IV secretion system protein TraC;protein_id=WP_031943254.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 12880 13266 . + . ID=gene-AC00_RS0126160;Name=trbI;gbkey=Gene;gene=trbI;gene_biotype=protein_coding;locus_tag=AC00_RS0126160;old_locus_tag=AC00_5066 NZ_JJLU01000155.1 Protein Homology CDS 12880 13266 . + 0 ID=cds-WP_000214082.1;Parent=gene-AC00_RS0126160;Dbxref=GenBank:WP_000214082.1;Name=WP_000214082.1;gbkey=CDS;gene=trbI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490574.1;locus_tag=AC00_RS0126160;product=type-F conjugative transfer system protein TrbI;protein_id=WP_000214082.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 13263 13895 . + . ID=gene-AC00_RS01175;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=AC00_RS01175;old_locus_tag=AC00_5067 NZ_JJLU01000155.1 Protein Homology CDS 13263 13895 . + 0 ID=cds-WP_001203720.1;Parent=gene-AC00_RS01175;Dbxref=GenBank:WP_001203720.1;Name=WP_001203720.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490575.1;locus_tag=AC00_RS01175;product=type-F conjugative transfer system protein TraW;protein_id=WP_001203720.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 13892 14884 . + . ID=gene-AC00_RS01170;Name=traU;gbkey=Gene;gene=traU;gene_biotype=protein_coding;locus_tag=AC00_RS01170;old_locus_tag=AC00_5068 NZ_JJLU01000155.1 Protein Homology CDS 13892 14884 . + 0 ID=cds-WP_000830838.1;Parent=gene-AC00_RS01170;Dbxref=GenBank:WP_000830838.1;Name=WP_000830838.1;gbkey=CDS;gene=traU;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490576.1;locus_tag=AC00_RS01170;product=conjugal transfer pilus assembly protein TraU;protein_id=WP_000830838.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 14914 15219 . + . ID=gene-AC00_RS0126165;Name=AC00_RS0126165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126165 NZ_JJLU01000155.1 Protein Homology CDS 14914 15219 . + 0 ID=cds-WP_000224411.1;Parent=gene-AC00_RS0126165;Dbxref=GenBank:WP_000224411.1;Name=WP_000224411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001505125.1;locus_tag=AC00_RS0126165;product=hypothetical protein;protein_id=WP_000224411.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 15228 15866 . + . ID=gene-AC00_RS01165;Name=trbC;gbkey=Gene;gene=trbC;gene_biotype=protein_coding;locus_tag=AC00_RS01165;old_locus_tag=AC00_5069 NZ_JJLU01000155.1 Protein Homology CDS 15228 15866 . + 0 ID=cds-WP_001080257.1;Parent=gene-AC00_RS01165;Dbxref=GenBank:WP_001080257.1;Name=WP_001080257.1;gbkey=CDS;gene=trbC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001733892.1;locus_tag=AC00_RS01165;product=type-F conjugative transfer system pilin assembly protein TrbC;protein_id=WP_001080257.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 15863 17671 . + . ID=gene-AC00_RS01160;Name=traN;gbkey=Gene;gene=traN;gene_biotype=protein_coding;locus_tag=AC00_RS01160;old_locus_tag=AC00_5070 NZ_JJLU01000155.1 Protein Homology CDS 15863 17671 . + 0 ID=cds-WP_000821863.1;Parent=gene-AC00_RS01160;Dbxref=GenBank:WP_000821863.1;Name=WP_000821863.1;gbkey=CDS;gene=traN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001756807.1;locus_tag=AC00_RS01160;product=type-F conjugative transfer system mating-pair stabilization protein TraN;protein_id=WP_000821863.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 17698 17955 . + . ID=gene-AC00_RS01155;Name=AC00_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01155;old_locus_tag=AC00_5071 NZ_JJLU01000155.1 Protein Homology CDS 17698 17955 . + 0 ID=cds-WP_000864320.1;Parent=gene-AC00_RS01155;Dbxref=GenBank:WP_000864320.1;Name=WP_000864320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864342.1;locus_tag=AC00_RS01155;product=conjugal transfer protein TrbE;protein_id=WP_000864320.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 17948 18691 . + . ID=gene-AC00_RS01150;Name=traF;gbkey=Gene;gene=traF;gene_biotype=protein_coding;locus_tag=AC00_RS01150;old_locus_tag=AC00_5072 NZ_JJLU01000155.1 Protein Homology CDS 17948 18691 . + 0 ID=cds-WP_001030371.1;Parent=gene-AC00_RS01150;Dbxref=GenBank:WP_001030371.1;Name=WP_001030371.1;gbkey=CDS;gene=traF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001030376.1;locus_tag=AC00_RS01150;product=type-F conjugative transfer system pilin assembly protein TraF;protein_id=WP_001030371.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 18707 19045 . + . ID=gene-AC00_RS01145;Name=trbA;gbkey=Gene;gene=trbA;gene_biotype=protein_coding;locus_tag=AC00_RS01145;old_locus_tag=AC00_5073 NZ_JJLU01000155.1 Protein Homology CDS 18707 19045 . + 0 ID=cds-WP_001287905.1;Parent=gene-AC00_RS01145;Dbxref=GenBank:WP_001287905.1;Name=WP_001287905.1;gbkey=CDS;gene=trbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001553756.1;locus_tag=AC00_RS01145;product=conjugal transfer protein TrbA;protein_id=WP_001287905.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 19172 19456 . + . ID=gene-AC00_RS01140;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=AC00_RS01140;old_locus_tag=AC00_5074 NZ_JJLU01000155.1 Protein Homology CDS 19172 19456 . + 0 ID=cds-WP_032282107.1;Parent=gene-AC00_RS01140;Dbxref=GenBank:WP_032282107.1;Name=WP_032282107.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001617873.1;locus_tag=AC00_RS01140;product=type-F conjugative transfer system pilin chaperone TraQ;protein_id=WP_032282107.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 19443 19988 . + . ID=gene-AC00_RS01135;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=AC00_RS01135;old_locus_tag=AC00_5075 NZ_JJLU01000155.1 Protein Homology CDS 19443 19988 . + 0 ID=cds-WP_000059824.1;Parent=gene-AC00_RS01135;Dbxref=GenBank:WP_000059824.1;Name=WP_000059824.1;gbkey=CDS;gene=trbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000052622.1;locus_tag=AC00_RS01135;product=type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB;protein_id=WP_000059824.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 19918 20259 . + . ID=gene-AC00_RS28815;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=AC00_RS28815;old_locus_tag=AC00_5076 NZ_JJLU01000155.1 Protein Homology CDS 19918 20259 . + 0 ID=cds-WP_001448115.1;Parent=gene-AC00_RS28815;Dbxref=GenBank:WP_001448115.1;Name=WP_001448115.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001444236.1;locus_tag=AC00_RS28815;product=P-type conjugative transfer protein TrbJ;protein_id=WP_001448115.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 20240 20632 . + . ID=gene-AC00_RS01130;Name=trbF;gbkey=Gene;gene=trbF;gene_biotype=protein_coding;locus_tag=AC00_RS01130;old_locus_tag=AC00_5077 NZ_JJLU01000155.1 Protein Homology CDS 20240 20632 . + 0 ID=cds-WP_000660703.1;Parent=gene-AC00_RS01130;Dbxref=GenBank:WP_000660703.1;Name=WP_000660703.1;gbkey=CDS;gene=trbF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016230912.1;locus_tag=AC00_RS01130;product=F-type conjugal transfer protein TrbF;protein_id=WP_000660703.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 20619 21992 . + . ID=gene-AC00_RS01125;Name=traH;gbkey=Gene;gene=traH;gene_biotype=protein_coding;locus_tag=AC00_RS01125;old_locus_tag=AC00_5078 NZ_JJLU01000155.1 Protein Homology CDS 20619 21992 . + 0 ID=cds-WP_001137364.1;Parent=gene-AC00_RS01125;Dbxref=GenBank:WP_001137364.1;Name=WP_001137364.1;gbkey=CDS;gene=traH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137361.1;locus_tag=AC00_RS01125;product=conjugal transfer pilus assembly protein TraH;protein_id=WP_001137364.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 21989 24808 . + . ID=gene-AC00_RS01120;Name=traG;gbkey=Gene;gene=traG;gene_biotype=protein_coding;locus_tag=AC00_RS01120;old_locus_tag=AC00_5079 NZ_JJLU01000155.1 Protein Homology CDS 21989 24808 . + 0 ID=cds-WP_031943253.1;Parent=gene-AC00_RS01120;Dbxref=GenBank:WP_031943253.1;Name=WP_031943253.1;gbkey=CDS;gene=traG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001007068.1;locus_tag=AC00_RS01120;product=conjugal transfer mating-pair stabilization protein TraG;protein_id=WP_031943253.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 24827 25324 . + . ID=gene-AC00_RS0126170;Name=AC00_RS0126170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126170 NZ_JJLU01000155.1 Protein Homology CDS 24827 25324 . + 0 ID=cds-WP_000605861.1;Parent=gene-AC00_RS0126170;Dbxref=GenBank:WP_000605861.1;Name=WP_000605861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605858.1;locus_tag=AC00_RS0126170;product=hypothetical protein;protein_id=WP_000605861.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 25356 26087 . + . ID=gene-AC00_RS01115;Name=traT;gbkey=Gene;gene=traT;gene_biotype=protein_coding;locus_tag=AC00_RS01115;old_locus_tag=AC00_5080 NZ_JJLU01000155.1 Protein Homology CDS 25356 26087 . + 0 ID=cds-WP_000850422.1;Parent=gene-AC00_RS01115;Dbxref=GenBank:WP_000850422.1;Name=WP_000850422.1;gbkey=CDS;gene=traT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490587.1;locus_tag=AC00_RS01115;product=conjugal transfer complement resistance protein TraT;protein_id=WP_000850422.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 26340 28547 . + . ID=gene-AC00_RS01110;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=AC00_RS01110;old_locus_tag=AC00_5081 NZ_JJLU01000155.1 Protein Homology CDS 26340 28547 . + 0 ID=cds-WP_001462104.1;Parent=gene-AC00_RS01110;Dbxref=GenBank:WP_001462104.1;Name=WP_001462104.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001577029.1;locus_tag=AC00_RS01110;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_001462104.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 28547 33817 . + . ID=gene-AC00_RS01105;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=AC00_RS01105;old_locus_tag=AC00_5082 NZ_JJLU01000155.1 Protein Homology CDS 28547 33817 . + 0 ID=cds-WP_031943251.1;Parent=gene-AC00_RS01105;Dbxref=GenBank:WP_031943251.1;Name=WP_031943251.1;Ontology_term=GO:0003678;gbkey=CDS;gene=traI;go_function=DNA helicase activity|0003678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490592.1;locus_tag=AC00_RS01105;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_031943251.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 33837 34583 . + . ID=gene-AC00_RS01100;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=AC00_RS01100;old_locus_tag=AC00_5083 NZ_JJLU01000155.1 Protein Homology CDS 33837 34583 . + 0 ID=cds-WP_000205725.1;Parent=gene-AC00_RS01100;Dbxref=GenBank:WP_000205725.1;Name=WP_000205725.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858383.2;locus_tag=AC00_RS01100;product=conjugal transfer pilus acetylase TraX;protein_id=WP_000205725.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 34642 35502 . + . ID=gene-AC00_RS01095;Name=uilS;gbkey=Gene;gene=uilS;gene_biotype=protein_coding;locus_tag=AC00_RS01095;old_locus_tag=AC00_5084 NZ_JJLU01000155.1 Protein Homology CDS 34642 35502 . + 0 ID=cds-WP_000704528.1;Parent=gene-AC00_RS01095;Dbxref=GenBank:WP_000704528.1;Name=WP_000704528.1;gbkey=CDS;gene=uilS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052670.1;locus_tag=AC00_RS01095;product=UilS family quorum-quenching N-acyl-homoserine lactonase;protein_id=WP_000704528.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 35605 36165 . + . ID=gene-AC00_RS01090;Name=AC00_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01090;old_locus_tag=AC00_5085 NZ_JJLU01000155.1 Protein Homology CDS 35605 36165 . + 0 ID=cds-WP_000139321.1;Parent=gene-AC00_RS01090;Dbxref=GenBank:WP_000139321.1;Name=WP_000139321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052671.1;locus_tag=AC00_RS01090;product=fertility inhibition protein FinO;protein_id=WP_000139321.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 36294 36506 . + . ID=gene-AC00_RS01085;Name=AC00_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01085;old_locus_tag=AC00_5086 NZ_JJLU01000155.1 Protein Homology CDS 36294 36506 . + 0 ID=cds-WP_001309245.1;Parent=gene-AC00_RS01085;Dbxref=GenBank:WP_001309245.1;Name=WP_001309245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001369432.1;locus_tag=AC00_RS01085;product=ANR family transcriptional regulator;protein_id=WP_001309245.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 36805 37482 . + . ID=gene-AC00_RS0126175;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC00_RS0126175 NZ_JJLU01000155.1 Protein Homology CDS 36805 37482 . + 0 ID=cds-WP_001339397.1;Parent=gene-AC00_RS0126175;Dbxref=GenBank:WP_001339397.1;Name=WP_001339397.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743492.1;locus_tag=AC00_RS0126175;product=IS66-like element accessory protein TnpA;protein_id=WP_001339397.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 37482 37829 . + . ID=gene-AC00_RS01080;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC00_RS01080;old_locus_tag=AC00_5088 NZ_JJLU01000155.1 Protein Homology CDS 37482 37829 . + 0 ID=cds-WP_000624622.1;Parent=gene-AC00_RS01080;Dbxref=GenBank:WP_000624622.1;Name=WP_000624622.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858152.1;locus_tag=AC00_RS01080;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624622.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 37849 39420 . + . ID=gene-AC00_RS01075;Name=AC00_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01075;old_locus_tag=AC00_5089 NZ_JJLU01000155.1 Protein Homology CDS 37849 39420 . + 0 ID=cds-WP_000381395.1;Parent=gene-AC00_RS01075;Dbxref=GenBank:WP_000381395.1;Name=WP_000381395.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904571.1;locus_tag=AC00_RS01075;product=IS66-like element ISCro1 family transposase;protein_id=WP_000381395.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 39458 39919 . + . ID=gene-AC00_RS01070;Name=AC00_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01070;old_locus_tag=AC00_5090 NZ_JJLU01000155.1 Protein Homology CDS 39458 39919 . + 0 ID=cds-WP_001233838.1;Parent=gene-AC00_RS01070;Dbxref=GenBank:WP_001233838.1;Name=WP_001233838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052672.1;locus_tag=AC00_RS01070;product=thermonuclease family protein;protein_id=WP_001233838.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 39965 40174 . + . ID=gene-AC00_RS01065;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=AC00_RS01065;old_locus_tag=AC00_5091 NZ_JJLU01000155.1 Protein Homology CDS 39965 40174 . + 0 ID=cds-WP_001298565.1;Parent=gene-AC00_RS01065;Dbxref=GenBank:WP_001298565.1;Name=WP_001298565.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958726.1;locus_tag=AC00_RS01065;product=hemolysin expression modulator Hha;protein_id=WP_001298565.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 40212 40802 . + . ID=gene-AC00_RS01060;Name=AC00_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01060;old_locus_tag=AC00_5092 NZ_JJLU01000155.1 Protein Homology CDS 40212 40802 . + 0 ID=cds-WP_000766805.1;Parent=gene-AC00_RS01060;Dbxref=GenBank:WP_000766805.1;Name=WP_000766805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858390.1;locus_tag=AC00_RS01060;product=DUF2726 domain-containing protein;protein_id=WP_000766805.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 41042 41302 . + . ID=gene-AC00_RS0126180;Name=AC00_RS0126180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126180;old_locus_tag=AC00_5093 NZ_JJLU01000155.1 Protein Homology CDS 41042 41302 . + 0 ID=cds-WP_000083819.1;Parent=gene-AC00_RS0126180;Dbxref=GenBank:WP_000083819.1;Name=WP_000083819.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858391.1;locus_tag=AC00_RS0126180;product=replication regulatory protein RepA;protein_id=WP_000083819.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 41527 41601 . + . ID=gene-AC00_RS0126185;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=AC00_RS0126185 NZ_JJLU01000155.1 Protein Homology CDS 41527 41601 . + 0 ID=cds-WP_001365705.1;Parent=gene-AC00_RS0126185;Dbxref=GenBank:WP_001365705.1;Name=WP_001365705.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001370046.1;locus_tag=AC00_RS0126185;product=RepA leader peptide Tap;protein_id=WP_001365705.1;transl_table=11 NZ_JJLU01000155.1 RefSeq gene 41594 42451 . + . ID=gene-AC00_RS01055;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AC00_RS01055;old_locus_tag=AC00_5094 NZ_JJLU01000155.1 Protein Homology CDS 41594 42451 . + 0 ID=cds-WP_000130647.1;Parent=gene-AC00_RS01055;Dbxref=GenBank:WP_000130647.1;Name=WP_000130647.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052675.1;locus_tag=AC00_RS01055;product=incFII family plasmid replication initiator RepA;protein_id=WP_000130647.1;transl_table=11 ##sequence-region NZ_JJLU01000156.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000156.1 RefSeq region 1 2047 . + . ID=NZ_JJLU01000156.1:1..2047;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000156.1 RefSeq pseudogene 1 77 . - . ID=gene-AC00_RS28830;Name=AC00_RS28830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28830;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000156.1 Protein Homology CDS 1 77 . - 0 ID=cds-AC00_RS28830;Parent=gene-AC00_RS28830;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311561.1;locus_tag=AC00_RS28830;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000156.1 RefSeq gene 165 596 . + . ID=gene-AC00_RS01050;Name=AC00_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01050;old_locus_tag=AC00_5095 NZ_JJLU01000156.1 Protein Homology CDS 165 596 . + 0 ID=cds-WP_000209792.1-2;Parent=gene-AC00_RS01050;Dbxref=GenBank:WP_000209792.1;Name=WP_000209792.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311562.1;locus_tag=AC00_RS01050;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000209792.1;transl_table=11 NZ_JJLU01000156.1 RefSeq gene 805 1050 . + . ID=gene-AC00_RS01045;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=AC00_RS01045;old_locus_tag=AC00_5096 NZ_JJLU01000156.1 Protein Homology CDS 805 1050 . + 0 ID=cds-WP_001223223.1-2;Parent=gene-AC00_RS01045;Dbxref=GenBank:WP_001223223.1;Name=WP_001223223.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311563.1;locus_tag=AC00_RS01045;product=glutaredoxin-like protein NrdH;protein_id=WP_001223223.1;transl_table=11 NZ_JJLU01000156.1 RefSeq gene 1047 1457 . + . ID=gene-AC00_RS01040;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=AC00_RS01040;old_locus_tag=AC00_5097 NZ_JJLU01000156.1 Protein Homology CDS 1047 1457 . + 0 ID=cds-WP_000080947.1;Parent=gene-AC00_RS01040;Dbxref=GenBank:WP_000080947.1;Name=WP_000080947.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311564.1;locus_tag=AC00_RS01040;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_000080947.1;transl_table=11 NZ_JJLU01000156.1 RefSeq gene 1430 2047 . + . ID=gene-AC00_RS01035;Name=AC00_RS01035;end_range=2047,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01035;old_locus_tag=AC00_5098;partial=true NZ_JJLU01000156.1 Protein Homology CDS 1430 2047 . + 0 ID=cds-WP_032288411.1;Parent=gene-AC00_RS01035;Dbxref=GenBank:WP_032288411.1;Name=WP_032288411.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;end_range=2047,.;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417161.1;locus_tag=AC00_RS01035;partial=true;product=ribonucleotide reductase N-terminal alpha domain-containing protein;protein_id=WP_032288411.1;transl_table=11 ##sequence-region NZ_JJLU01000157.1 1 19800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000157.1 RefSeq region 1 19800 . + . ID=NZ_JJLU01000157.1:1..19800;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000157.1 RefSeq pseudogene 31 510 . + . ID=gene-AC00_RS01030;Name=AC00_RS01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01030;old_locus_tag=AC00_5099;partial=true;pseudo=true;start_range=.,31 NZ_JJLU01000157.1 Protein Homology CDS 31 510 . + 0 ID=cds-AC00_RS01030;Parent=gene-AC00_RS01030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC00_RS01030;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,31;transl_table=11 NZ_JJLU01000157.1 RefSeq pseudogene 553 892 . - . ID=gene-AC00_RS01025;Name=AC00_RS01025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS01025;old_locus_tag=AC00_5100;partial=true;pseudo=true;start_range=.,553 NZ_JJLU01000157.1 Protein Homology CDS 553 892 . - 0 ID=cds-AC00_RS01025;Parent=gene-AC00_RS01025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001347735.1;locus_tag=AC00_RS01025;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,553;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 1208 1852 . - . ID=gene-AC00_RS01020;Name=AC00_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01020;old_locus_tag=AC00_5101 NZ_JJLU01000157.1 Protein Homology CDS 1208 1852 . - 0 ID=cds-WP_001333354.1;Parent=gene-AC00_RS01020;Dbxref=GenBank:WP_001333354.1;Name=WP_001333354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309416.1;locus_tag=AC00_RS01020;product=hypothetical protein;protein_id=WP_001333354.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 1873 2142 . - . ID=gene-AC00_RS01015;Name=AC00_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01015;old_locus_tag=AC00_5102 NZ_JJLU01000157.1 Protein Homology CDS 1873 2142 . - 0 ID=cds-WP_000226519.1;Parent=gene-AC00_RS01015;Dbxref=GenBank:WP_000226519.1;Name=WP_000226519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309415.1;locus_tag=AC00_RS01015;product=PerC family transcriptional regulator;protein_id=WP_000226519.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 2221 2859 . - . ID=gene-AC00_RS0126195;Name=AC00_RS0126195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126195;old_locus_tag=AC00_5103 NZ_JJLU01000157.1 Protein Homology CDS 2221 2859 . - 0 ID=cds-WP_000502842.1;Parent=gene-AC00_RS0126195;Dbxref=GenBank:WP_000502842.1;Name=WP_000502842.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309414.1;locus_tag=AC00_RS0126195;product=IbrB-like domain-containing protein;protein_id=WP_000502842.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 2844 5360 . - . ID=gene-AC00_RS0126200;Name=AC00_RS0126200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126200;old_locus_tag=AC00_5104 NZ_JJLU01000157.1 Protein Homology CDS 2844 5360 . - 0 ID=cds-WP_050438677.1;Parent=gene-AC00_RS0126200;Dbxref=GenBank:WP_050438677.1;Name=WP_050438677.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536548.1;locus_tag=AC00_RS0126200;product=AAA domain-containing protein;protein_id=WP_050438677.1;transl_table=11 NZ_JJLU01000157.1 RefSeq pseudogene 5602 5778 . - . ID=gene-AC00_RS31430;Name=AC00_RS31430;end_range=5778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31430;partial=true;pseudo=true NZ_JJLU01000157.1 Protein Homology CDS 5602 5778 . - 0 ID=cds-AC00_RS31430;Parent=gene-AC00_RS31430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5778,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309409.2;locus_tag=AC00_RS31430;partial=true;product=POTRA domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 6890 7099 . + . ID=gene-AC00_RS0126210;Name=AC00_RS0126210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126210 NZ_JJLU01000157.1 Protein Homology CDS 6890 7099 . + 0 ID=cds-WP_032150361.1;Parent=gene-AC00_RS0126210;Dbxref=GenBank:WP_032150361.1;Name=WP_032150361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001287794.1;locus_tag=AC00_RS0126210;product=DUF4222 domain-containing protein;protein_id=WP_032150361.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 7152 7385 . - . ID=gene-AC00_RS01005;Name=AC00_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01005;old_locus_tag=AC00_5108 NZ_JJLU01000157.1 Protein Homology CDS 7152 7385 . - 0 ID=cds-WP_000124173.1;Parent=gene-AC00_RS01005;Dbxref=GenBank:WP_000124173.1;Name=WP_000124173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309405.1;locus_tag=AC00_RS01005;product=hypothetical protein;protein_id=WP_000124173.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 7481 8104 . - . ID=gene-AC00_RS01000;Name=AC00_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS01000;old_locus_tag=AC00_5109 NZ_JJLU01000157.1 Protein Homology CDS 7481 8104 . - 0 ID=cds-WP_001260393.1;Parent=gene-AC00_RS01000;Dbxref=GenBank:WP_001260393.1;Name=WP_001260393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309404.1;locus_tag=AC00_RS01000;product=hypothetical protein;protein_id=WP_001260393.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 8193 8702 . - . ID=gene-AC00_RS30005;Name=AC00_RS30005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30005 NZ_JJLU01000157.1 Protein Homology CDS 8193 8702 . - 0 ID=cds-WP_001167434.1;Parent=gene-AC00_RS30005;Dbxref=GenBank:WP_001167434.1;Name=WP_001167434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309403.1;locus_tag=AC00_RS30005;product=hypothetical protein;protein_id=WP_001167434.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 9160 9618 . + . ID=gene-AC00_RS0126225;Name=AC00_RS0126225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126225 NZ_JJLU01000157.1 Protein Homology CDS 9160 9618 . + 0 ID=cds-WP_077757448.1;Parent=gene-AC00_RS0126225;Dbxref=GenBank:WP_077757448.1;Name=WP_077757448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309401.1;locus_tag=AC00_RS0126225;product=hypothetical protein;protein_id=WP_077757448.1;transl_table=11 NZ_JJLU01000157.1 RefSeq pseudogene 9718 10402 . + . ID=gene-AC00_RS30010;Name=AC00_RS30010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30010;old_locus_tag=AC00_5111;pseudo=true NZ_JJLU01000157.1 Protein Homology CDS 9718 10402 . + 0 ID=cds-AC00_RS30010;Parent=gene-AC00_RS30010;Note=frameshifted;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000406625.1;locus_tag=AC00_RS30010;product=CPBP family intramembrane glutamic endopeptidase;pseudo=true;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 11014 11337 . + . ID=gene-AC00_RS28850;Name=AC00_RS28850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28850 NZ_JJLU01000157.1 Protein Homology CDS 11014 11337 . + 0 ID=cds-WP_001390454.1;Parent=gene-AC00_RS28850;Dbxref=GenBank:WP_001390454.1;Name=WP_001390454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001390454.1;locus_tag=AC00_RS28850;product=hypothetical protein;protein_id=WP_001390454.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 11398 13500 . - . ID=gene-AC00_RS00990;Name=mchF;gbkey=Gene;gene=mchF;gene_biotype=protein_coding;locus_tag=AC00_RS00990;old_locus_tag=AC00_5112 NZ_JJLU01000157.1 Protein Homology CDS 11398 13500 . - 0 ID=cds-WP_000181296.1;Parent=gene-AC00_RS00990;Dbxref=GenBank:WP_000181296.1;Name=WP_000181296.1;gbkey=CDS;gene=mchF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000181296.1;locus_tag=AC00_RS00990;product=microcin export peptidase/ABC transporter MchF;protein_id=WP_000181296.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 13493 14767 . - . ID=gene-AC00_RS00985;Name=AC00_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00985;old_locus_tag=AC00_5113 NZ_JJLU01000157.1 Protein Homology CDS 13493 14767 . - 0 ID=cds-WP_174218965.1;Parent=gene-AC00_RS00985;Dbxref=GenBank:WP_174218965.1;Name=WP_174218965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000489618.1;locus_tag=AC00_RS00985;product=HlyD family secretion protein;protein_id=WP_174218965.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 14920 15372 . - . ID=gene-AC00_RS00980;Name=AC00_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00980;old_locus_tag=AC00_5114 NZ_JJLU01000157.1 Protein Homology CDS 14920 15372 . - 0 ID=cds-WP_032250539.1;Parent=gene-AC00_RS00980;Dbxref=GenBank:WP_032250539.1;Name=WP_032250539.1;Ontology_term=GO:0009404,GO:0016746,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238609.1;locus_tag=AC00_RS00980;product=toxin-activating lysine-acyltransferase;protein_id=WP_032250539.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 15398 16948 . - . ID=gene-AC00_RS00975;Name=AC00_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00975;old_locus_tag=AC00_5115 NZ_JJLU01000157.1 Protein Homology CDS 15398 16948 . - 0 ID=cds-WP_000019320.1;Parent=gene-AC00_RS00975;Dbxref=GenBank:WP_000019320.1;Name=WP_000019320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019324.1;locus_tag=AC00_RS00975;product=hypothetical protein;protein_id=WP_000019320.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 17220 17447 . - . ID=gene-AC00_RS28855;Name=mchB;gbkey=Gene;gene=mchB;gene_biotype=protein_coding;locus_tag=AC00_RS28855 NZ_JJLU01000157.1 Protein Homology CDS 17220 17447 . - 0 ID=cds-WP_001375214.1;Parent=gene-AC00_RS28855;Dbxref=GenBank:WP_001375214.1;Name=WP_001375214.1;gbkey=CDS;gene=mchB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001375214.1;locus_tag=AC00_RS28855;product=microcin H47;protein_id=WP_001375214.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 17475 17684 . - . ID=gene-AC00_RS28860;Name=mchI;gbkey=Gene;gene=mchI;gene_biotype=protein_coding;locus_tag=AC00_RS28860 NZ_JJLU01000157.1 Protein Homology CDS 17475 17684 . - 0 ID=cds-WP_000120662.1;Parent=gene-AC00_RS28860;Dbxref=GenBank:WP_000120662.1;Name=WP_000120662.1;gbkey=CDS;gene=mchI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000120664.1;locus_tag=AC00_RS28860;product=microcin H47 immunity protein MchI;protein_id=WP_000120662.1;transl_table=11 NZ_JJLU01000157.1 RefSeq gene 18497 18886 . + . ID=gene-AC00_RS0126230;Name=mchS3;gbkey=Gene;gene=mchS3;gene_biotype=protein_coding;locus_tag=AC00_RS0126230 NZ_JJLU01000157.1 Protein Homology CDS 18497 18886 . + 0 ID=cds-WP_174218966.1;Parent=gene-AC00_RS0126230;Dbxref=GenBank:WP_174218966.1;Name=WP_174218966.1;gbkey=CDS;gene=mchS3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001554632.1;locus_tag=AC00_RS0126230;product=MchS3 family protein;protein_id=WP_174218966.1;transl_table=11 NZ_JJLU01000157.1 RefSeq pseudogene 18928 19800 . + . ID=gene-AC00_RS30015;Name=AC00_RS30015;end_range=19800,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30015;partial=true;pseudo=true NZ_JJLU01000157.1 Protein Homology CDS 18928 19800 . + 0 ID=cds-AC00_RS30015;Parent=gene-AC00_RS30015;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=19800,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=AC00_RS30015;partial=true;product=IS3-like element IS2 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000158.1 1 3372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000158.1 RefSeq region 1 3372 . + . ID=NZ_JJLU01000158.1:1..3372;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000158.1 RefSeq gene 1 683 . - . ID=gene-AC00_RS00960;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=AC00_RS00960;old_locus_tag=AC00_5120;partial=true;start_range=.,1 NZ_JJLU01000158.1 Protein Homology CDS 1 683 . - 0 ID=cds-WP_032282202.1;Parent=gene-AC00_RS00960;Dbxref=GenBank:WP_032282202.1;Name=WP_032282202.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001425616.1;locus_tag=AC00_RS00960;partial=true;product=incFII family plasmid replication initiator RepA;protein_id=WP_032282202.1;start_range=.,1;transl_table=11 NZ_JJLU01000158.1 RefSeq gene 676 723 . - . ID=gene-AC00_RS31435;Name=AC00_RS31435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31435 NZ_JJLU01000158.1 Protein Homology CDS 676 723 . - 0 ID=cds-WP_234812421.1;Parent=gene-AC00_RS31435;Dbxref=GenBank:WP_234812421.1;Name=WP_234812421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03475.1;locus_tag=AC00_RS31435;product=hypothetical protein;protein_id=WP_234812421.1;transl_table=11 NZ_JJLU01000158.1 RefSeq gene 714 947 . + . ID=gene-AC00_RS31440;Name=AC00_RS31440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31440 NZ_JJLU01000158.1 Protein Homology CDS 714 947 . + 0 ID=cds-WP_235802559.1;Parent=gene-AC00_RS31440;Dbxref=GenBank:WP_235802559.1;Name=WP_235802559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001410080.1;locus_tag=AC00_RS31440;product=replication protein RepA;protein_id=WP_235802559.1;transl_table=11 NZ_JJLU01000158.1 RefSeq gene 983 1240 . - . ID=gene-AC00_RS0126245;Name=AC00_RS0126245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126245 NZ_JJLU01000158.1 Protein Homology CDS 983 1240 . - 0 ID=cds-WP_000083826.1;Parent=gene-AC00_RS0126245;Dbxref=GenBank:WP_000083826.1;Name=WP_000083826.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000083822.1;locus_tag=AC00_RS0126245;product=replication regulatory protein RepA;protein_id=WP_000083826.1;transl_table=11 NZ_JJLU01000158.1 RefSeq gene 1525 2007 . - . ID=gene-AC00_RS00955;Name=AC00_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00955;old_locus_tag=AC00_5121 NZ_JJLU01000158.1 Protein Homology CDS 1525 2007 . - 0 ID=cds-WP_032250661.1;Parent=gene-AC00_RS00955;Dbxref=GenBank:WP_032250661.1;Name=WP_032250661.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858192.1;locus_tag=AC00_RS00955;product=GNAT family N-acetyltransferase;protein_id=WP_032250661.1;transl_table=11 NZ_JJLU01000158.1 RefSeq gene 1998 2288 . - . ID=gene-AC00_RS00950;Name=AC00_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00950;old_locus_tag=AC00_5122 NZ_JJLU01000158.1 Protein Homology CDS 1998 2288 . - 0 ID=cds-WP_021532981.1;Parent=gene-AC00_RS00950;Dbxref=GenBank:WP_021532981.1;Name=WP_021532981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100678.1;locus_tag=AC00_RS00950;product=DUF1778 domain-containing protein;protein_id=WP_021532981.1;transl_table=11 NZ_JJLU01000158.1 RefSeq gene 2620 2769 . - . ID=gene-AC00_RS26825;Name=AC00_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26825 NZ_JJLU01000158.1 Protein Homology CDS 2620 2769 . - 0 ID=cds-WP_001312851.1;Parent=gene-AC00_RS26825;Dbxref=GenBank:WP_001312851.1;Name=WP_001312851.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=AC00_RS26825;product=Hok/Gef family protein;protein_id=WP_001312851.1;transl_table=11 NZ_JJLU01000158.1 RefSeq gene 3108 3372 . + . ID=gene-AC00_RS00945;Name=AC00_RS00945;end_range=3372,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00945;old_locus_tag=AC00_5124;partial=true NZ_JJLU01000158.1 Protein Homology CDS 3108 3372 . + 0 ID=cds-WP_032288413.1;Parent=gene-AC00_RS00945;Dbxref=GenBank:WP_032288413.1;Name=WP_032288413.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3372,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC00_RS00945;partial=true;product=transposase;protein_id=WP_032288413.1;transl_table=11 ##sequence-region NZ_JJLU01000159.1 1 586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000159.1 RefSeq region 1 586 . + . ID=NZ_JJLU01000159.1:1..586;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000159.1 RefSeq gene 49 276 . - . ID=gene-AC00_RS00940;Name=AC00_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00940;old_locus_tag=AC00_5125 NZ_JJLU01000159.1 Protein Homology CDS 49 276 . - 0 ID=cds-WP_001143120.1-2;Parent=gene-AC00_RS00940;Dbxref=GenBank:WP_001143120.1;Name=WP_001143120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=AC00_RS00940;product=YccJ family protein;protein_id=WP_001143120.1;transl_table=11 NZ_JJLU01000159.1 RefSeq gene 297 586 . - . ID=gene-AC00_RS00935;Name=wrbA;end_range=586,.;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AC00_RS00935;old_locus_tag=AC00_5126;partial=true NZ_JJLU01000159.1 Protein Homology CDS 297 586 . - 2 ID=cds-WP_032288414.1;Parent=gene-AC00_RS00935;Dbxref=GenBank:WP_032288414.1;Name=WP_032288414.1;Ontology_term=GO:0003955,GO:0010181;end_range=586,.;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415524.1;locus_tag=AC00_RS00935;partial=true;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_032288414.1;transl_table=11 ##sequence-region NZ_JJLU01000160.1 1 1410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000160.1 RefSeq region 1 1410 . + . ID=NZ_JJLU01000160.1:1..1410;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000160.1 RefSeq pseudogene 1 308 . - . ID=gene-AC00_RS00930;Name=AC00_RS00930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00930;old_locus_tag=AC00_5127;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000160.1 Protein Homology CDS 1 308 . - 0 ID=cds-AC00_RS00930;Parent=gene-AC00_RS00930;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447023.1;locus_tag=AC00_RS00930;partial=true;product=IS21 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000160.1 RefSeq pseudogene 541 816 . + . ID=gene-AC00_RS31445;Name=AC00_RS31445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31445;partial=true;pseudo=true;start_range=.,541 NZ_JJLU01000160.1 Protein Homology CDS 541 816 . + 0 ID=cds-AC00_RS31445;Parent=gene-AC00_RS31445;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC00_RS31445;partial=true;product=transposase;pseudo=true;start_range=.,541;transl_table=11 NZ_JJLU01000160.1 RefSeq gene 813 1163 . + . ID=gene-AC00_RS00925;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC00_RS00925;old_locus_tag=AC00_5129 NZ_JJLU01000160.1 Protein Homology CDS 813 1163 . + 0 ID=cds-WP_000624688.1;Parent=gene-AC00_RS00925;Dbxref=GenBank:WP_000624688.1;Name=WP_000624688.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC00_RS00925;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000624688.1;transl_table=11 NZ_JJLU01000160.1 RefSeq pseudogene 1194 1410 . + . ID=gene-AC00_RS00920;Name=AC00_RS00920;end_range=1410,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00920;old_locus_tag=AC00_5130;partial=true;pseudo=true NZ_JJLU01000160.1 Protein Homology CDS 1194 1410 . + 0 ID=cds-AC00_RS00920;Parent=gene-AC00_RS00920;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC00_RS00920;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000161.1 1 2047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000161.1 RefSeq region 1 2047 . + . ID=NZ_JJLU01000161.1:1..2047;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000161.1 RefSeq gene 377 502 . - . ID=gene-AC00_RS28890;Name=AC00_RS28890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28890 NZ_JJLU01000161.1 Protein Homology CDS 377 502 . - 0 ID=cds-WP_001372321.1;Parent=gene-AC00_RS28890;Dbxref=GenBank:WP_001372321.1;Name=WP_001372321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=AC00_RS28890;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_001372321.1;transl_table=11 NZ_JJLU01000161.1 RefSeq pseudogene 444 593 . - . ID=gene-AC00_RS31450;Name=mok;gbkey=Gene;gene=mok;gene_biotype=pseudogene;locus_tag=AC00_RS31450;partial=true;pseudo=true;start_range=.,444 NZ_JJLU01000161.1 Protein Homology CDS 444 593 . - 0 ID=cds-AC00_RS31450;Parent=gene-AC00_RS31450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mok;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AC00_RS31450;partial=true;product=plasmid maintenance protein Mok;pseudo=true;start_range=.,444;transl_table=11 NZ_JJLU01000161.1 RefSeq gene 615 803 . + . ID=gene-AC00_RS31005;Name=AC00_RS31005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31005;old_locus_tag=AC00_5131 NZ_JJLU01000161.1 GeneMarkS-2+ CDS 615 803 . + 0 ID=cds-WP_001299721.1;Parent=gene-AC00_RS31005;Dbxref=GenBank:WP_001299721.1;Name=WP_001299721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31005;product=hypothetical protein;protein_id=WP_001299721.1;transl_table=11 NZ_JJLU01000161.1 RefSeq pseudogene 772 1534 . - . ID=gene-AC00_RS00915;Name=AC00_RS00915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00915;old_locus_tag=AC00_5132;pseudo=true NZ_JJLU01000161.1 Protein Homology CDS 772 1534 . - 0 ID=cds-AC00_RS00915;Parent=gene-AC00_RS00915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=AC00_RS00915;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 NZ_JJLU01000161.1 RefSeq gene 1531 1965 . - . ID=gene-AC00_RS00910;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AC00_RS00910;old_locus_tag=AC00_5133 NZ_JJLU01000161.1 Protein Homology CDS 1531 1965 . - 0 ID=cds-WP_000845901.1;Parent=gene-AC00_RS00910;Dbxref=GenBank:WP_000845901.1;Name=WP_000845901.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AC00_RS00910;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845901.1;transl_table=11 ##sequence-region NZ_JJLU01000162.1 1 392 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000162.1 RefSeq region 1 392 . + . ID=NZ_JJLU01000162.1:1..392;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000162.1 RefSeq pseudogene 1 392 . - . ID=gene-AC00_RS00905;Name=AC00_RS00905;end_range=392,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00905;old_locus_tag=AC00_5134;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000162.1 Protein Homology CDS 1 392 . - 0 ID=cds-AC00_RS00905;Parent=gene-AC00_RS00905;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611684.1;locus_tag=AC00_RS00905;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000163.1 1 1372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000163.1 RefSeq region 1 1372 . + . ID=NZ_JJLU01000163.1:1..1372;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000163.1 RefSeq gene 1 873 . - . ID=gene-AC00_RS00900;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=AC00_RS00900;old_locus_tag=AC00_5135;partial=true;start_range=.,1 NZ_JJLU01000163.1 Protein Homology CDS 1 873 . - 0 ID=cds-WP_032288419.1;Parent=gene-AC00_RS00900;Dbxref=GenBank:WP_032288419.1;Name=WP_032288419.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308805.1;locus_tag=AC00_RS00900;partial=true;product=quinolinate synthase NadA;protein_id=WP_032288419.1;start_range=.,1;transl_table=11 NZ_JJLU01000163.1 RefSeq gene 1151 1276 . - . ID=gene-AC00_RS26830;Name=AC00_RS26830;gbkey=Gene;gene_biotype=ncRNA;locus_tag=AC00_RS26830 NZ_JJLU01000163.1 cmsearch ncRNA 1151 1276 . - . ID=rna-AC00_RS26830;Parent=gene-AC00_RS26830;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26830;product=RtT sRNA NZ_JJLU01000163.1 cmsearch exon 1151 1276 . - . ID=exon-AC00_RS26830-1;Parent=rna-AC00_RS26830;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS26830;product=RtT sRNA ##sequence-region NZ_JJLU01000164.1 1 1430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000164.1 RefSeq region 1 1430 . + . ID=NZ_JJLU01000164.1:1..1430;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000164.1 RefSeq gene 1 1097 . + . ID=gene-AC00_RS28900;Name=AC00_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28900;old_locus_tag=AC00_5137;partial=true;start_range=.,1 NZ_JJLU01000164.1 Protein Homology CDS 1 1097 . + 2 ID=cds-WP_032288402.1-2;Parent=gene-AC00_RS28900;Dbxref=GenBank:WP_032288402.1;Name=WP_032288402.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC00_RS28900;partial=true;product=IS66-like element ISEc43 family transposase;protein_id=WP_032288402.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000165.1 1 2748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000165.1 RefSeq region 1 2748 . + . ID=NZ_JJLU01000165.1:1..2748;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000165.1 RefSeq gene 1 340 . - . ID=gene-AC00_RS00895;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC00_RS00895;old_locus_tag=AC00_5139;partial=true;start_range=.,1 NZ_JJLU01000165.1 Protein Homology CDS 1 340 . - 0 ID=cds-WP_032256328.1;Parent=gene-AC00_RS00895;Dbxref=GenBank:WP_032256328.1;Name=WP_032256328.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=AC00_RS00895;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_032256328.1;start_range=.,1;transl_table=11 NZ_JJLU01000165.1 RefSeq pseudogene 337 444 . - . ID=gene-AC00_RS30685;Name=AC00_RS30685;end_range=444,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30685;old_locus_tag=AC00_5140;partial=true;pseudo=true NZ_JJLU01000165.1 Protein Homology CDS 337 444 . - 0 ID=cds-AC00_RS30685;Parent=gene-AC00_RS30685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=444,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC00_RS30685;partial=true;product=IS66-like element accessory protein TnpA;pseudo=true;transl_table=11 NZ_JJLU01000165.1 RefSeq pseudogene 595 1074 . - . ID=gene-AC00_RS00890;Name=AC00_RS00890;end_range=1074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00890;old_locus_tag=AC00_5141;partial=true;pseudo=true NZ_JJLU01000165.1 Protein Homology CDS 595 1074 . - 0 ID=cds-AC00_RS00890;Parent=gene-AC00_RS00890;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1074,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC00_RS00890;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000165.1 RefSeq pseudogene 1158 2540 . - . ID=gene-AC00_RS0126270;Name=ltrA;end_range=2540,.;gbkey=Gene;gene=ltrA;gene_biotype=pseudogene;locus_tag=AC00_RS0126270;partial=true;pseudo=true NZ_JJLU01000165.1 Protein Homology CDS 1158 2540 . - 0 ID=cds-AC00_RS0126270;Parent=gene-AC00_RS0126270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000373,GO:0003964;end_range=2540,.;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC00_RS0126270;partial=true;product=group II intron reverse transcriptase/maturase;pseudo=true;transl_table=11 NZ_JJLU01000165.1 RefSeq pseudogene 2550 2748 . - . ID=gene-AC00_RS28910;Name=AC00_RS28910;end_range=2748,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28910;partial=true;pseudo=true NZ_JJLU01000165.1 Protein Homology CDS 2550 2748 . - 1 ID=cds-AC00_RS28910;Parent=gene-AC00_RS28910;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2748,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488852.1;locus_tag=AC00_RS28910;partial=true;product=IS4 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000166.1 1 1237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000166.1 RefSeq region 1 1237 . + . ID=NZ_JJLU01000166.1:1..1237;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000166.1 RefSeq gene 93 473 . + . ID=gene-AC00_RS00885;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC00_RS00885;old_locus_tag=AC00_5143 NZ_JJLU01000166.1 Protein Homology CDS 93 473 . + 0 ID=cds-WP_001466366.1;Parent=gene-AC00_RS00885;Dbxref=GenBank:WP_001466366.1;Name=WP_001466366.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AC00_RS00885;product=IS66-like element accessory protein TnpA;protein_id=WP_001466366.1;transl_table=11 NZ_JJLU01000166.1 RefSeq gene 470 817 . + . ID=gene-AC00_RS00880;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC00_RS00880;old_locus_tag=AC00_5144 NZ_JJLU01000166.1 Protein Homology CDS 470 817 . + 0 ID=cds-WP_000612591.1;Parent=gene-AC00_RS00880;Dbxref=GenBank:WP_000612591.1;Name=WP_000612591.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC00_RS00880;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612591.1;transl_table=11 NZ_JJLU01000166.1 RefSeq gene 867 1237 . + . ID=gene-AC00_RS00875;Name=AC00_RS00875;end_range=1237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00875;old_locus_tag=AC00_5145;partial=true NZ_JJLU01000166.1 Protein Homology CDS 867 1237 . + 0 ID=cds-WP_032288421.1;Parent=gene-AC00_RS00875;Dbxref=GenBank:WP_032288421.1;Name=WP_032288421.1;Ontology_term=GO:0006313,GO:0032196,GO:0003677;end_range=1237,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA transposition|0006313||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC00_RS00875;partial=true;product=transposase;protein_id=WP_032288421.1;transl_table=11 ##sequence-region NZ_JJLU01000167.1 1 1342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000167.1 RefSeq region 1 1342 . + . ID=NZ_JJLU01000167.1:1..1342;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000167.1 RefSeq gene 1 992 . - . ID=gene-AC00_RS0126275;Name=AC00_RS0126275;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC00_RS0126275;partial=true;start_range=.,1 NZ_JJLU01000167.1 cmsearch rRNA 1 992 . - . ID=rna-AC00_RS0126275;Parent=gene-AC00_RS0126275;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0126275;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JJLU01000167.1 cmsearch exon 1 992 . - . ID=exon-AC00_RS0126275-1;Parent=rna-AC00_RS0126275;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS0126275;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JJLU01000168.1 1 2873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000168.1 RefSeq region 1 2873 . + . ID=NZ_JJLU01000168.1:1..2873;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000168.1 RefSeq gene 1 549 . - . ID=gene-AC00_RS00870;Name=AC00_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00870;old_locus_tag=AC00_5147;partial=true;start_range=.,1 NZ_JJLU01000168.1 Protein Homology CDS 1 549 . - 0 ID=cds-WP_032288422.1;Parent=gene-AC00_RS00870;Dbxref=GenBank:WP_032288422.1;Name=WP_032288422.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248708.1;locus_tag=AC00_RS00870;partial=true;product=phage tail protein I;protein_id=WP_032288422.1;start_range=.,1;transl_table=11 NZ_JJLU01000168.1 RefSeq gene 542 1459 . - . ID=gene-AC00_RS00865;Name=AC00_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00865;old_locus_tag=AC00_5148 NZ_JJLU01000168.1 Protein Homology CDS 542 1459 . - 0 ID=cds-WP_050438681.1;Parent=gene-AC00_RS00865;Dbxref=GenBank:WP_050438681.1;Name=WP_050438681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605010.1;locus_tag=AC00_RS00865;product=baseplate J/gp47 family protein;protein_id=WP_050438681.1;transl_table=11 NZ_JJLU01000168.1 RefSeq gene 1446 1805 . - . ID=gene-AC00_RS00860;Name=AC00_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00860;old_locus_tag=AC00_5149 NZ_JJLU01000168.1 Protein Homology CDS 1446 1805 . - 0 ID=cds-WP_032282215.1;Parent=gene-AC00_RS00860;Dbxref=GenBank:WP_032282215.1;Name=WP_032282215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=AC00_RS00860;product=GPW/gp25 family protein;protein_id=WP_032282215.1;transl_table=11 NZ_JJLU01000168.1 RefSeq gene 1802 2380 . - . ID=gene-AC00_RS00855;Name=AC00_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00855;old_locus_tag=AC00_5150 NZ_JJLU01000168.1 Protein Homology CDS 1802 2380 . - 0 ID=cds-WP_032288423.1;Parent=gene-AC00_RS00855;Dbxref=GenBank:WP_032288423.1;Name=WP_032288423.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=AC00_RS00855;product=phage baseplate assembly protein V;protein_id=WP_032288423.1;transl_table=11 NZ_JJLU01000168.1 RefSeq gene 2633 2873 . + . ID=gene-AC00_RS0126280;Name=AC00_RS0126280;end_range=2873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126280;old_locus_tag=AC00_5152;partial=true NZ_JJLU01000168.1 Protein Homology CDS 2633 2873 . + 0 ID=cds-WP_000179208.1;Parent=gene-AC00_RS0126280;Dbxref=GenBank:WP_000179208.1;Name=WP_000179208.1;end_range=2873,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0126280;partial=true;product=IS1-like element transposase;protein_id=WP_000179208.1;transl_table=11 ##sequence-region NZ_JJLU01000169.1 1 611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000169.1 RefSeq region 1 611 . + . ID=NZ_JJLU01000169.1:1..611;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000169.1 RefSeq pseudogene 1 284 . + . ID=gene-AC00_RS28915;Name=AC00_RS28915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28915;old_locus_tag=AC00_5153;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000169.1 Protein Homology CDS 1 284 . + 2 ID=cds-AC00_RS28915;Parent=gene-AC00_RS28915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28915;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000169.1 RefSeq pseudogene 252 611 . - . ID=gene-AC00_RS0126285;Name=AC00_RS0126285;end_range=611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0126285;partial=true;pseudo=true;start_range=.,252 NZ_JJLU01000169.1 Protein Homology CDS 252 611 . - 0 ID=cds-AC00_RS0126285;Parent=gene-AC00_RS0126285;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=611,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AC00_RS0126285;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,252;transl_table=11 ##sequence-region NZ_JJLU01000170.1 1 377 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000170.1 RefSeq region 1 377 . + . ID=NZ_JJLU01000170.1:1..377;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000170.1 RefSeq gene 281 377 . + . ID=gene-AC00_RS31455;Name=AC00_RS31455;end_range=377,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31455;old_locus_tag=AC00_5154;partial=true NZ_JJLU01000170.1 Protein Homology CDS 281 377 . + 0 ID=cds-WP_001425824.1-4;Parent=gene-AC00_RS31455;Dbxref=GenBank:WP_001425824.1;Name=WP_001425824.1;end_range=377,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414557.1;locus_tag=AC00_RS31455;partial=true;product=hypothetical protein;protein_id=WP_001425824.1;transl_table=11 ##sequence-region NZ_JJLU01000171.1 1 933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000171.1 RefSeq region 1 933 . + . ID=NZ_JJLU01000171.1:1..933;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000171.1 RefSeq gene 1 210 . - . ID=gene-AC00_RS0126290;Name=AC00_RS0126290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126290;old_locus_tag=AC00_5155;partial=true;start_range=.,1 NZ_JJLU01000171.1 Protein Homology CDS 1 210 . - 0 ID=cds-WP_001408908.1;Parent=gene-AC00_RS0126290;Dbxref=GenBank:WP_001408908.1;Name=WP_001408908.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0126290;partial=true;product=IS1 family transposase;protein_id=WP_001408908.1;start_range=.,1;transl_table=11 NZ_JJLU01000171.1 RefSeq pseudogene 257 640 . + . ID=gene-AC00_RS00845;Name=AC00_RS00845;end_range=640,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00845;old_locus_tag=AC00_5156;partial=true;pseudo=true;start_range=.,257 NZ_JJLU01000171.1 Protein Homology CDS 257 640 . + 0 ID=cds-AC00_RS00845;Parent=gene-AC00_RS00845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312854.1;locus_tag=AC00_RS00845;partial=true;product=carbohydrate porin;pseudo=true;start_range=.,257;transl_table=11 NZ_JJLU01000171.1 RefSeq gene 696 933 . + . ID=gene-AC00_RS0126295;Name=AC00_RS0126295;end_range=933,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126295;old_locus_tag=AC00_5157;partial=true NZ_JJLU01000171.1 Protein Homology CDS 696 933 . + 0 ID=cds-WP_000179207.1-4;Parent=gene-AC00_RS0126295;Dbxref=GenBank:WP_000179207.1;Name=WP_000179207.1;end_range=933,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0126295;partial=true;product=IS1-like element transposase;protein_id=WP_000179207.1;transl_table=11 ##sequence-region NZ_JJLU01000172.1 1 1299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000172.1 RefSeq region 1 1299 . + . ID=NZ_JJLU01000172.1:1..1299;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000172.1 RefSeq gene 56 751 . + . ID=gene-AC00_RS00840;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=AC00_RS00840;old_locus_tag=AC00_5158 NZ_JJLU01000172.1 Protein Homology CDS 56 751 . + 0 ID=cds-WP_000888654.1-2;Parent=gene-AC00_RS00840;Dbxref=GenBank:WP_000888654.1;Name=WP_000888654.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308092.1;locus_tag=AC00_RS00840;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_000888654.1;transl_table=11 NZ_JJLU01000172.1 RefSeq pseudogene 826 1299 . + . ID=gene-AC00_RS00835;Name=AC00_RS00835;end_range=1299,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00835;old_locus_tag=AC00_5159;partial=true;pseudo=true NZ_JJLU01000172.1 Protein Homology CDS 826 1299 . + 0 ID=cds-AC00_RS00835;Parent=gene-AC00_RS00835;Note=Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1299,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308091.1;locus_tag=AC00_RS00835;partial=true;product=DNA polymerase II;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000173.1 1 2159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000173.1 RefSeq region 1 2159 . + . ID=NZ_JJLU01000173.1:1..2159;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000173.1 RefSeq gene 1 239 . + . ID=gene-AC00_RS00830;Name=AC00_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00830;old_locus_tag=AC00_5160;partial=true;start_range=.,1 NZ_JJLU01000173.1 Protein Homology CDS 1 239 . + 2 ID=cds-WP_000696951.1-2;Parent=gene-AC00_RS00830;Dbxref=GenBank:WP_000696951.1;Name=WP_000696951.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS00830;partial=true;product=IS1 family transposase;protein_id=WP_000696951.1;start_range=.,1;transl_table=11 NZ_JJLU01000173.1 RefSeq gene 250 2159 . - . ID=gene-AC00_RS00825;Name=AC00_RS00825;end_range=2159,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00825;old_locus_tag=AC00_5161;partial=true NZ_JJLU01000173.1 Protein Homology CDS 250 2159 . - 2 ID=cds-WP_248790382.1;Parent=gene-AC00_RS00825;Dbxref=GenBank:WP_248790382.1;Name=WP_248790382.1;end_range=2159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000016405.1;locus_tag=AC00_RS00825;partial=true;product=hypothetical protein;protein_id=WP_248790382.1;transl_table=11 ##sequence-region NZ_JJLU01000174.1 1 13803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000174.1 RefSeq region 1 13803 . + . ID=NZ_JJLU01000174.1:1..13803;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000174.1 RefSeq gene 1 327 . + . ID=gene-AC00_RS0126300;Name=AC00_RS0126300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126300;partial=true;start_range=.,1 NZ_JJLU01000174.1 Protein Homology CDS 1 327 . + 0 ID=cds-WP_000375015.1;Parent=gene-AC00_RS0126300;Dbxref=GenBank:WP_000375015.1;Name=WP_000375015.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=AC00_RS0126300;partial=true;product=integrase core domain-containing protein;protein_id=WP_000375015.1;start_range=.,1;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 977 2251 . + . ID=gene-AC00_RS00820;Name=AC00_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00820;old_locus_tag=AC00_5163 NZ_JJLU01000174.1 Protein Homology CDS 977 2251 . + 0 ID=cds-WP_077757451.1;Parent=gene-AC00_RS00820;Dbxref=GenBank:WP_077757451.1;Name=WP_077757451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001390635.1;locus_tag=AC00_RS00820;product=alpha/beta hydrolase-fold protein;protein_id=WP_077757451.1;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 2393 3517 . - . ID=gene-AC00_RS00815;Name=AC00_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00815;old_locus_tag=AC00_5164 NZ_JJLU01000174.1 Protein Homology CDS 2393 3517 . - 0 ID=cds-WP_001231529.1;Parent=gene-AC00_RS00815;Dbxref=GenBank:WP_001231529.1;Name=WP_001231529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309397.1;locus_tag=AC00_RS00815;product=nucleotide disphospho-sugar-binding domain-containing protein;protein_id=WP_001231529.1;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 4247 4444 . - . ID=gene-AC00_RS00810;Name=AC00_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00810;old_locus_tag=AC00_5165 NZ_JJLU01000174.1 Protein Homology CDS 4247 4444 . - 0 ID=cds-WP_000958487.1;Parent=gene-AC00_RS00810;Dbxref=GenBank:WP_000958487.1;Name=WP_000958487.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502603.1;locus_tag=AC00_RS00810;product=helix-turn-helix transcriptional regulator;protein_id=WP_000958487.1;transl_table=11 NZ_JJLU01000174.1 RefSeq pseudogene 4510 4780 . - . ID=gene-AC00_RS31010;Name=AC00_RS31010;end_range=4780,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31010;old_locus_tag=AC00_5166;partial=true;pseudo=true NZ_JJLU01000174.1 Protein Homology CDS 4510 4780 . - 0 ID=cds-AC00_RS31010;Parent=gene-AC00_RS31010;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593693.1;locus_tag=AC00_RS31010;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 5009 5437 . - . ID=gene-AC00_RS31015;Name=AC00_RS31015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31015 NZ_JJLU01000174.1 GeneMarkS-2+ CDS 5009 5437 . - 0 ID=cds-WP_187439752.1;Parent=gene-AC00_RS31015;Dbxref=GenBank:WP_187439752.1;Name=WP_187439752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31015;product=hypothetical protein;protein_id=WP_187439752.1;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 5601 5795 . + . ID=gene-AC00_RS00795;Name=AC00_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00795;old_locus_tag=AC00_5169 NZ_JJLU01000174.1 Protein Homology CDS 5601 5795 . + 0 ID=cds-WP_001004881.1;Parent=gene-AC00_RS00795;Dbxref=GenBank:WP_001004881.1;Name=WP_001004881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309391.1;locus_tag=AC00_RS00795;product=hypothetical protein;protein_id=WP_001004881.1;transl_table=11 NZ_JJLU01000174.1 RefSeq pseudogene 6108 6472 . + . ID=gene-AC00_RS31780;Name=AC00_RS31780;end_range=6472,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31780;partial=true;pseudo=true;start_range=.,6108 NZ_JJLU01000174.1 Protein Homology CDS 6108 6472 . + 0 ID=cds-AC00_RS31780;Parent=gene-AC00_RS31780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=6472,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=AC00_RS31780;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,6108;transl_table=11 NZ_JJLU01000174.1 RefSeq pseudogene 6594 6930 . - . ID=gene-AC00_RS28940;Name=AC00_RS28940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28940;pseudo=true NZ_JJLU01000174.1 Protein Homology CDS 6594 6930 . - 0 ID=cds-AC00_RS28940;Parent=gene-AC00_RS28940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_009502602.1;locus_tag=AC00_RS28940;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 7564 7782 . - . ID=gene-AC00_RS0126320;Name=AC00_RS0126320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126320 NZ_JJLU01000174.1 Protein Homology CDS 7564 7782 . - 0 ID=cds-WP_000477617.1;Parent=gene-AC00_RS0126320;Dbxref=GenBank:WP_000477617.1;Name=WP_000477617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309389.2;locus_tag=AC00_RS0126320;product=hypothetical protein;protein_id=WP_000477617.1;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 9113 9295 . - . ID=gene-AC00_RS31665;Name=AC00_RS31665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31665;old_locus_tag=AC00_5173 NZ_JJLU01000174.1 Protein Homology CDS 9113 9295 . - 0 ID=cds-WP_000922604.1;Parent=gene-AC00_RS31665;Dbxref=GenBank:WP_000922604.1;Name=WP_000922604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000922600.1;locus_tag=AC00_RS31665;product=hypothetical protein;protein_id=WP_000922604.1;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 9234 11324 . + . ID=gene-AC00_RS00775;Name=iha;gbkey=Gene;gene=iha;gene_biotype=protein_coding;locus_tag=AC00_RS00775;old_locus_tag=AC00_5174 NZ_JJLU01000174.1 Protein Homology CDS 9234 11324 . + 0 ID=cds-WP_001223350.1;Parent=gene-AC00_RS00775;Dbxref=GenBank:WP_001223350.1;Name=WP_001223350.1;gbkey=CDS;gene=iha;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309387.1;locus_tag=AC00_RS00775;product=bifunctional siderophore receptor/adhesin Iha;protein_id=WP_001223350.1;transl_table=11 NZ_JJLU01000174.1 RefSeq pseudogene 11542 11692 . - . ID=gene-AC00_RS30695;Name=AC00_RS30695;end_range=11692,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30695;partial=true;pseudo=true NZ_JJLU01000174.1 Protein Homology CDS 11542 11692 . - 0 ID=cds-AC00_RS30695;Parent=gene-AC00_RS30695;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562684.1;locus_tag=AC00_RS30695;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 12023 12427 . + . ID=gene-AC00_RS00770;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC00_RS00770;old_locus_tag=AC00_5175 NZ_JJLU01000174.1 Protein Homology CDS 12023 12427 . + 0 ID=cds-WP_000839179.1;Parent=gene-AC00_RS00770;Dbxref=GenBank:WP_000839179.1;Name=WP_000839179.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=AC00_RS00770;product=IS66-like element accessory protein TnpA;protein_id=WP_000839179.1;transl_table=11 NZ_JJLU01000174.1 RefSeq gene 12424 12771 . + . ID=gene-AC00_RS00765;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=AC00_RS00765;old_locus_tag=AC00_5176 NZ_JJLU01000174.1 Protein Homology CDS 12424 12771 . + 0 ID=cds-WP_000612626.1;Parent=gene-AC00_RS00765;Dbxref=GenBank:WP_000612626.1;Name=WP_000612626.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311895.1;locus_tag=AC00_RS00765;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_000612626.1;transl_table=11 NZ_JJLU01000174.1 RefSeq pseudogene 12911 13803 . + . ID=gene-AC00_RS28970;Name=AC00_RS28970;end_range=13803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS28970;old_locus_tag=AC00_5178;partial=true;pseudo=true;start_range=.,12911 NZ_JJLU01000174.1 Protein Homology CDS 12911 13803 . + 0 ID=cds-AC00_RS28970;Parent=gene-AC00_RS28970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=13803,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC00_RS28970;partial=true;product=IS66-like element ISEc22 family transposase;pseudo=true;start_range=.,12911;transl_table=11 ##sequence-region NZ_JJLU01000175.1 1 2026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000175.1 RefSeq region 1 2026 . + . ID=NZ_JJLU01000175.1:1..2026;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000175.1 RefSeq pseudogene 1 112 . + . ID=gene-AC00_RS30700;Name=AC00_RS30700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30700;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000175.1 Protein Homology CDS 1 112 . + 1 ID=cds-AC00_RS30700;Parent=gene-AC00_RS30700;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS30700;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000175.1 RefSeq pseudogene 282 446 . + . ID=gene-AC00_RS0126345;Name=AC00_RS0126345;end_range=446,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0126345;partial=true;pseudo=true NZ_JJLU01000175.1 Protein Homology CDS 282 446 . + 0 ID=cds-AC00_RS0126345;Parent=gene-AC00_RS0126345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=446,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC00_RS0126345;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLU01000175.1 RefSeq gene 546 1301 . - . ID=gene-AC00_RS00760;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=AC00_RS00760;old_locus_tag=AC00_5179 NZ_JJLU01000175.1 Protein Homology CDS 546 1301 . - 0 ID=cds-WP_001282653.1-3;Parent=gene-AC00_RS00760;Dbxref=GenBank:WP_001282653.1;Name=WP_001282653.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001282653.1;locus_tag=AC00_RS00760;product=IS21-like element ISSso4 family helper ATPase IstB;protein_id=WP_001282653.1;transl_table=11 NZ_JJLU01000175.1 RefSeq gene 1318 2026 . - . ID=gene-AC00_RS00755;Name=AC00_RS00755;end_range=2026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00755;old_locus_tag=AC00_5180;partial=true NZ_JJLU01000175.1 Protein Homology CDS 1318 2026 . - 1 ID=cds-WP_024248422.1;Parent=gene-AC00_RS00755;Dbxref=GenBank:WP_024248422.1;Name=WP_024248422.1;end_range=2026,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447023.1;locus_tag=AC00_RS00755;partial=true;product=Mu transposase domain-containing protein;protein_id=WP_024248422.1;transl_table=11 ##sequence-region NZ_JJLU01000176.1 1 317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000176.1 RefSeq region 1 317 . + . ID=NZ_JJLU01000176.1:1..317;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000176.1 RefSeq pseudogene 66 317 . + . ID=gene-AC00_RS00750;Name=AC00_RS00750;end_range=317,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00750;old_locus_tag=AC00_5181;partial=true;pseudo=true NZ_JJLU01000176.1 Protein Homology CDS 66 317 . + 0 ID=cds-AC00_RS00750;Parent=gene-AC00_RS00750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=317,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080164.1;locus_tag=AC00_RS00750;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000177.1 1 3291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000177.1 RefSeq region 1 3291 . + . ID=NZ_JJLU01000177.1:1..3291;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000177.1 RefSeq pseudogene 1 683 . + . ID=gene-AC00_RS31020;Name=AC00_RS31020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31020;old_locus_tag=AC00_5182;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000177.1 Protein Homology CDS 1 683 . + 2 ID=cds-AC00_RS31020;Parent=gene-AC00_RS31020;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848316.1;locus_tag=AC00_RS31020;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000177.1 RefSeq gene 680 1060 . + . ID=gene-AC00_RS00740;Name=AC00_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00740;old_locus_tag=AC00_5183 NZ_JJLU01000177.1 Protein Homology CDS 680 1060 . + 0 ID=cds-WP_032282128.1;Parent=gene-AC00_RS00740;Dbxref=GenBank:WP_032282128.1;Name=WP_032282128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=AC00_RS00740;product=tail fiber assembly protein;protein_id=WP_032282128.1;transl_table=11 NZ_JJLU01000177.1 RefSeq gene 1077 1292 . - . ID=gene-AC00_RS00735;Name=AC00_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00735;old_locus_tag=AC00_5184 NZ_JJLU01000177.1 GeneMarkS-2+ CDS 1077 1292 . - 0 ID=cds-WP_032282129.1;Parent=gene-AC00_RS00735;Dbxref=GenBank:WP_032282129.1;Name=WP_032282129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00735;product=hypothetical protein;protein_id=WP_032282129.1;transl_table=11 NZ_JJLU01000177.1 RefSeq gene 1292 2566 . - . ID=gene-AC00_RS26845;Name=AC00_RS26845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS26845;old_locus_tag=AC00_5185 NZ_JJLU01000177.1 Protein Homology CDS 1292 2566 . - 0 ID=cds-WP_032282344.1;Parent=gene-AC00_RS26845;Dbxref=GenBank:WP_032282344.1;Name=WP_032282344.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925348.1;locus_tag=AC00_RS26845;product=phage tail protein;protein_id=WP_032282344.1;transl_table=11 NZ_JJLU01000177.1 RefSeq gene 2563 3174 . - . ID=gene-AC00_RS00725;Name=AC00_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00725;old_locus_tag=AC00_5186 NZ_JJLU01000177.1 Protein Homology CDS 2563 3174 . - 0 ID=cds-WP_032282214.1;Parent=gene-AC00_RS00725;Dbxref=GenBank:WP_032282214.1;Name=WP_032282214.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248708.1;locus_tag=AC00_RS00725;product=phage tail protein I;protein_id=WP_032282214.1;transl_table=11 ##sequence-region NZ_JJLU01000178.1 1 864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000178.1 RefSeq region 1 864 . + . ID=NZ_JJLU01000178.1:1..864;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000178.1 RefSeq pseudogene 463 864 . + . ID=gene-AC00_RS00720;Name=AC00_RS00720;end_range=864,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00720;old_locus_tag=AC00_5189;partial=true;pseudo=true NZ_JJLU01000178.1 Protein Homology CDS 463 864 . + 0 ID=cds-AC00_RS00720;Parent=gene-AC00_RS00720;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=864,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708749.1;locus_tag=AC00_RS00720;partial=true;product=reverse transcriptase domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000179.1 1 20598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000179.1 RefSeq region 1 20598 . + . ID=NZ_JJLU01000179.1:1..20598;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000179.1 RefSeq gene 1 215 . + . ID=gene-AC00_RS00715;Name=AC00_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00715;old_locus_tag=AC00_5190;partial=true;start_range=.,1 NZ_JJLU01000179.1 Protein Homology CDS 1 215 . + 2 ID=cds-WP_148720330.1;Parent=gene-AC00_RS00715;Dbxref=GenBank:WP_148720330.1;Name=WP_148720330.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414793.2;locus_tag=AC00_RS00715;partial=true;product=transposase;protein_id=WP_148720330.1;start_range=.,1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 253 1383 . - . ID=gene-AC00_RS00710;Name=AC00_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00710;old_locus_tag=AC00_5191 NZ_JJLU01000179.1 Protein Homology CDS 253 1383 . - 0 ID=cds-WP_050438682.1;Parent=gene-AC00_RS00710;Dbxref=GenBank:WP_050438682.1;Name=WP_050438682.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.6;locus_tag=AC00_RS00710;product=AAA family ATPase;protein_id=WP_050438682.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 1646 2452 . - . ID=gene-AC00_RS00705;Name=AC00_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00705;old_locus_tag=AC00_5192 NZ_JJLU01000179.1 Protein Homology CDS 1646 2452 . - 0 ID=cds-WP_032282330.1;Parent=gene-AC00_RS00705;Dbxref=GenBank:WP_032282330.1;Name=WP_032282330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461746.1;locus_tag=AC00_RS00705;product=hypothetical protein;protein_id=WP_032282330.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 2462 2656 . - . ID=gene-AC00_RS0126350;Name=AC00_RS0126350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126350;old_locus_tag=AC00_5193 NZ_JJLU01000179.1 Protein Homology CDS 2462 2656 . - 0 ID=cds-WP_032282329.1;Parent=gene-AC00_RS0126350;Dbxref=GenBank:WP_032282329.1;Name=WP_032282329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461747.1;locus_tag=AC00_RS0126350;product=hypothetical protein;protein_id=WP_032282329.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 2947 3135 . - . ID=gene-AC00_RS00700;Name=AC00_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00700;old_locus_tag=AC00_5194 NZ_JJLU01000179.1 Protein Homology CDS 2947 3135 . - 0 ID=cds-WP_032282328.1;Parent=gene-AC00_RS00700;Dbxref=GenBank:WP_032282328.1;Name=WP_032282328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001749760.1;locus_tag=AC00_RS00700;product=hypothetical protein;protein_id=WP_032282328.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 3265 5682 . - . ID=gene-AC00_RS00695;Name=AC00_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00695;old_locus_tag=AC00_5195 NZ_JJLU01000179.1 Protein Homology CDS 3265 5682 . - 0 ID=cds-WP_032282327.1;Parent=gene-AC00_RS00695;Dbxref=GenBank:WP_032282327.1;Name=WP_032282327.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006655401.1;locus_tag=AC00_RS00695;product=replication endonuclease;protein_id=WP_032282327.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 5679 6998 . - . ID=gene-AC00_RS00690;Name=AC00_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00690;old_locus_tag=AC00_5196 NZ_JJLU01000179.1 Protein Homology CDS 5679 6998 . - 0 ID=cds-WP_032282326.1;Parent=gene-AC00_RS00690;Dbxref=GenBank:WP_032282326.1;Name=WP_032282326.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278127.1;locus_tag=AC00_RS00690;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=WP_032282326.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 6995 7840 . - . ID=gene-AC00_RS00685;Name=AC00_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00685;old_locus_tag=AC00_5197 NZ_JJLU01000179.1 Protein Homology CDS 6995 7840 . - 0 ID=cds-WP_032282325.1;Parent=gene-AC00_RS00685;Dbxref=GenBank:WP_032282325.1;Name=WP_032282325.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397663.1;locus_tag=AC00_RS00685;product=DNA adenine methylase;protein_id=WP_032282325.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 7837 8136 . - . ID=gene-AC00_RS00680;Name=AC00_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00680;old_locus_tag=AC00_5198 NZ_JJLU01000179.1 Protein Homology CDS 7837 8136 . - 0 ID=cds-WP_032288432.1;Parent=gene-AC00_RS00680;Dbxref=GenBank:WP_032288432.1;Name=WP_032288432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178747.1;locus_tag=AC00_RS00680;product=DUF3850 domain-containing protein;protein_id=WP_032288432.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 8133 8417 . - . ID=gene-AC00_RS00675;Name=AC00_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00675;old_locus_tag=AC00_5199 NZ_JJLU01000179.1 GeneMarkS-2+ CDS 8133 8417 . - 0 ID=cds-WP_032282323.1;Parent=gene-AC00_RS00675;Dbxref=GenBank:WP_032282323.1;Name=WP_032282323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00675;product=hypothetical protein;protein_id=WP_032282323.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 8414 8641 . - . ID=gene-AC00_RS00670;Name=AC00_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00670;old_locus_tag=AC00_5200 NZ_JJLU01000179.1 Protein Homology CDS 8414 8641 . - 0 ID=cds-WP_032282322.1;Parent=gene-AC00_RS00670;Dbxref=GenBank:WP_032282322.1;Name=WP_032282322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744222.1;locus_tag=AC00_RS00670;product=TraR/DksA family transcriptional regulator;protein_id=WP_032282322.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 8641 8874 . - . ID=gene-AC00_RS00665;Name=AC00_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00665;old_locus_tag=AC00_5201 NZ_JJLU01000179.1 Protein Homology CDS 8641 8874 . - 0 ID=cds-WP_032282321.1;Parent=gene-AC00_RS00665;Dbxref=GenBank:WP_032282321.1;Name=WP_032282321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461659.1;locus_tag=AC00_RS00665;product=DUF2732 family protein;protein_id=WP_032282321.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 8942 9283 . - . ID=gene-AC00_RS0126355;Name=AC00_RS0126355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126355;old_locus_tag=AC00_5202 NZ_JJLU01000179.1 Protein Homology CDS 8942 9283 . - 0 ID=cds-WP_032282320.1;Parent=gene-AC00_RS0126355;Dbxref=GenBank:WP_032282320.1;Name=WP_032282320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=AC00_RS0126355;product=DUF5347 domain-containing protein;protein_id=WP_032282320.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 9247 9447 . - . ID=gene-AC00_RS00660;Name=AC00_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00660;old_locus_tag=AC00_5203 NZ_JJLU01000179.1 Protein Homology CDS 9247 9447 . - 0 ID=cds-WP_032288433.1;Parent=gene-AC00_RS00660;Dbxref=GenBank:WP_032288433.1;Name=WP_032288433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077499.1;locus_tag=AC00_RS00660;product=phage filamentation protein Fil family protein;protein_id=WP_032288433.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 9455 9964 . - . ID=gene-AC00_RS00655;Name=AC00_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00655;old_locus_tag=AC00_5204 NZ_JJLU01000179.1 Protein Homology CDS 9455 9964 . - 0 ID=cds-WP_032282319.1;Parent=gene-AC00_RS00655;Dbxref=GenBank:WP_032282319.1;Name=WP_032282319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223868.1;locus_tag=AC00_RS00655;product=phage regulatory CII family protein;protein_id=WP_032282319.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 10000 10245 . - . ID=gene-AC00_RS00650;Name=AC00_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00650;old_locus_tag=AC00_5205 NZ_JJLU01000179.1 Protein Homology CDS 10000 10245 . - 0 ID=cds-WP_032282318.1;Parent=gene-AC00_RS00650;Dbxref=GenBank:WP_032282318.1;Name=WP_032282318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102107.1;locus_tag=AC00_RS00650;product=hypothetical protein;protein_id=WP_032282318.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 10367 10999 . + . ID=gene-AC00_RS00645;Name=AC00_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00645;old_locus_tag=AC00_5206 NZ_JJLU01000179.1 Protein Homology CDS 10367 10999 . + 0 ID=cds-WP_032282317.1;Parent=gene-AC00_RS00645;Dbxref=GenBank:WP_032282317.1;Name=WP_032282317.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747373.1;locus_tag=AC00_RS00645;product=phage repressor protein CI;protein_id=WP_032282317.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 11002 12024 . + . ID=gene-AC00_RS00640;Name=AC00_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00640;old_locus_tag=AC00_5207 NZ_JJLU01000179.1 Protein Homology CDS 11002 12024 . + 0 ID=cds-WP_032282316.1;Parent=gene-AC00_RS00640;Dbxref=GenBank:WP_032282316.1;Name=WP_032282316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697097.1;locus_tag=AC00_RS00640;product=site-specific integrase;protein_id=WP_032282316.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 12034 13224 . + . ID=gene-AC00_RS00635;Name=AC00_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00635;old_locus_tag=AC00_5208 NZ_JJLU01000179.1 Protein Homology CDS 12034 13224 . + 0 ID=cds-WP_032288434.1;Parent=gene-AC00_RS00635;Dbxref=GenBank:WP_032288434.1;Name=WP_032288434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817398.1;locus_tag=AC00_RS00635;product=hypothetical protein;protein_id=WP_032288434.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 13589 14830 . + . ID=gene-AC00_RS00630;Name=AC00_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00630;old_locus_tag=AC00_5209 NZ_JJLU01000179.1 Protein Homology CDS 13589 14830 . + 0 ID=cds-WP_032282315.1;Parent=gene-AC00_RS00630;Dbxref=GenBank:WP_032282315.1;Name=WP_032282315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417111.1;locus_tag=AC00_RS00630;product=integrase;protein_id=WP_032282315.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 14889 15767 . - . ID=gene-AC00_RS00625;Name=AC00_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00625;old_locus_tag=AC00_5210 NZ_JJLU01000179.1 Protein Homology CDS 14889 15767 . - 0 ID=cds-WP_000947284.1;Parent=gene-AC00_RS00625;Dbxref=GenBank:WP_000947284.1;Name=WP_000947284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947284.1;locus_tag=AC00_RS00625;product=hypothetical protein;protein_id=WP_000947284.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 15893 16105 . + . ID=gene-AC00_RS0126360;Name=AC00_RS0126360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126360 NZ_JJLU01000179.1 Protein Homology CDS 15893 16105 . + 0 ID=cds-WP_001325074.1;Parent=gene-AC00_RS0126360;Dbxref=GenBank:WP_001325074.1;Name=WP_001325074.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417113.1;locus_tag=AC00_RS0126360;product=AlpA family transcriptional regulator;protein_id=WP_001325074.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 16236 17648 . + . ID=gene-AC00_RS00620;Name=AC00_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00620;old_locus_tag=AC00_5211 NZ_JJLU01000179.1 Protein Homology CDS 16236 17648 . + 0 ID=cds-WP_032282314.1;Parent=gene-AC00_RS00620;Dbxref=GenBank:WP_032282314.1;Name=WP_032282314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277629.1;locus_tag=AC00_RS00620;product=YfjI family protein;protein_id=WP_032282314.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 17873 18496 . + . ID=gene-AC00_RS00615;Name=AC00_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00615;old_locus_tag=AC00_5212 NZ_JJLU01000179.1 Protein Homology CDS 17873 18496 . + 0 ID=cds-WP_001028832.1;Parent=gene-AC00_RS00615;Dbxref=GenBank:WP_001028832.1;Name=WP_001028832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001028832.1;locus_tag=AC00_RS00615;product=inovirus Gp2 family protein;protein_id=WP_001028832.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 18586 20130 . - . ID=gene-AC00_RS00610;Name=AC00_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00610;old_locus_tag=AC00_5213 NZ_JJLU01000179.1 GeneMarkS-2+ CDS 18586 20130 . - 0 ID=cds-WP_196613734.1;Parent=gene-AC00_RS00610;Dbxref=GenBank:WP_196613734.1;Name=WP_196613734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00610;product=hypothetical protein;protein_id=WP_196613734.1;transl_table=11 NZ_JJLU01000179.1 RefSeq gene 20406 20598 . + . ID=gene-AC00_RS28980;Name=AC00_RS28980;end_range=20598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28980;old_locus_tag=AC00_5214;partial=true NZ_JJLU01000179.1 Protein Homology CDS 20406 20598 . + 0 ID=cds-WP_001396889.1-2;Parent=gene-AC00_RS28980;Dbxref=GenBank:WP_001396889.1;Name=WP_001396889.1;Ontology_term=GO:0006313;end_range=20598,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS28980;partial=true;product=IS1 family transposase;protein_id=WP_001396889.1;transl_table=11 ##sequence-region NZ_JJLU01000180.1 1 1241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000180.1 RefSeq region 1 1241 . + . ID=NZ_JJLU01000180.1:1..1241;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000180.1 RefSeq pseudogene 1 119 . + . ID=gene-AC00_RS30050;Name=AC00_RS30050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30050;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000180.1 Protein Homology CDS 1 119 . + 2 ID=cds-AC00_RS30050;Parent=gene-AC00_RS30050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AC00_RS30050;partial=true;product=class A beta-lactamase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000180.1 RefSeq pseudogene 598 1241 . - . ID=gene-AC00_RS30715;Name=AC00_RS30715;end_range=1241,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30715;partial=true;pseudo=true;start_range=.,598 NZ_JJLU01000180.1 Protein Homology CDS 598 1241 . - 0 ID=cds-AC00_RS30715;Parent=gene-AC00_RS30715;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=1241,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC00_RS30715;partial=true;product=IS3-like element IS629 family transposase;pseudo=true;start_range=.,598;transl_table=11 NZ_JJLU01000180.1 cmsearch sequence_feature 940 1056 . - . ID=id-AC00_RS30715;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS30715;pseudo=true ##sequence-region NZ_JJLU01000181.1 1 921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000181.1 RefSeq region 1 921 . + . ID=NZ_JJLU01000181.1:1..921;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000181.1 RefSeq pseudogene 1 305 . + . ID=gene-AC00_RS00595;Name=AC00_RS00595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00595;old_locus_tag=AC00_5217;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000181.1 Protein Homology CDS 1 305 . + 2 ID=cds-AC00_RS00595;Parent=gene-AC00_RS00595;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS00595;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000181.1 RefSeq pseudogene 317 607 . + . ID=gene-AC00_RS30055;Name=AC00_RS30055;end_range=607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30055;old_locus_tag=AC00_5218;partial=true;pseudo=true;start_range=.,317 NZ_JJLU01000181.1 Protein Homology CDS 317 607 . + 0 ID=cds-AC00_RS30055;Parent=gene-AC00_RS30055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308469.2;locus_tag=AC00_RS30055;partial=true;product=hypothetical protein;pseudo=true;start_range=.,317;transl_table=11 NZ_JJLU01000181.1 RefSeq pseudogene 624 921 . - . ID=gene-AC00_RS00585;Name=AC00_RS00585;end_range=921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00585;old_locus_tag=AC00_5219;partial=true;pseudo=true NZ_JJLU01000181.1 Protein Homology CDS 624 921 . - 1 ID=cds-AC00_RS00585;Parent=gene-AC00_RS00585;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=921,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS00585;partial=true;product=IS1-like element IS1A family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000182.1 1 1077 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000182.1 RefSeq region 1 1077 . + . ID=NZ_JJLU01000182.1:1..1077;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000182.1 RefSeq gene 1 263 . - . ID=gene-AC00_RS28985;Name=AC00_RS28985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS28985;old_locus_tag=AC00_5220;partial=true;start_range=.,1 NZ_JJLU01000182.1 Protein Homology CDS 1 263 . - 0 ID=cds-WP_000019385.1;Parent=gene-AC00_RS28985;Dbxref=GenBank:WP_000019385.1;Name=WP_000019385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS28985;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_000019385.1;start_range=.,1;transl_table=11 NZ_JJLU01000182.1 RefSeq pseudogene 536 784 . + . ID=gene-AC00_RS26850;Name=AC00_RS26850;end_range=784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS26850;old_locus_tag=AC00_5221;partial=true;pseudo=true;start_range=.,536 NZ_JJLU01000182.1 Protein Homology CDS 536 784 . + 0 ID=cds-AC00_RS26850;Parent=gene-AC00_RS26850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418730.4;locus_tag=AC00_RS26850;partial=true;product=N-acetylneuraminate epimerase;pseudo=true;start_range=.,536;transl_table=11 NZ_JJLU01000182.1 RefSeq pseudogene 866 1077 . + . ID=gene-AC00_RS00575;Name=AC00_RS00575;end_range=1077,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00575;old_locus_tag=AC00_5222;partial=true;pseudo=true NZ_JJLU01000182.1 Protein Homology CDS 866 1077 . + 0 ID=cds-AC00_RS00575;Parent=gene-AC00_RS00575;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1077,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS00575;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000183.1 1 1303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000183.1 RefSeq region 1 1303 . + . ID=NZ_JJLU01000183.1:1..1303;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000183.1 RefSeq pseudogene 1 278 . - . ID=gene-AC00_RS00570;Name=AC00_RS00570;end_range=278,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00570;old_locus_tag=AC00_5223;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000183.1 Protein Homology CDS 1 278 . - 0 ID=cds-AC00_RS00570;Parent=gene-AC00_RS00570;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=278,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611684.1;locus_tag=AC00_RS00570;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000183.1 RefSeq gene 363 1040 . + . ID=gene-AC00_RS00565;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=AC00_RS00565;old_locus_tag=AC00_5224 NZ_JJLU01000183.1 Protein Homology CDS 363 1040 . + 0 ID=cds-WP_001401776.1;Parent=gene-AC00_RS00565;Dbxref=GenBank:WP_001401776.1;Name=WP_001401776.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;gene=tnpA;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311873.1;locus_tag=AC00_RS00565;product=IS66-like element accessory protein TnpA;protein_id=WP_001401776.1;transl_table=11 NZ_JJLU01000183.1 RefSeq pseudogene 1091 1303 . + . ID=gene-AC00_RS0126380;Name=tnpB;end_range=1303,.;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AC00_RS0126380;partial=true;pseudo=true NZ_JJLU01000183.1 Protein Homology CDS 1091 1303 . + 0 ID=cds-AC00_RS0126380;Parent=gene-AC00_RS0126380;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B frameshifted%3B incomplete%3B missing C-terminus;end_range=1303,.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858246.1;locus_tag=AC00_RS0126380;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000184.1 1 5439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000184.1 RefSeq region 1 5439 . + . ID=NZ_JJLU01000184.1:1..5439;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000184.1 RefSeq pseudogene 5 210 . - . ID=gene-AC00_RS31785;Name=AC00_RS31785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31785;pseudo=true NZ_JJLU01000184.1 Protein Homology CDS 5 210 . - 0 ID=cds-AC00_RS31785;Parent=gene-AC00_RS31785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AC00_RS31785;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000184.1 RefSeq pseudogene 278 452 . + . ID=gene-AC00_RS31790;Name=AC00_RS31790;end_range=452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31790;partial=true;pseudo=true NZ_JJLU01000184.1 Protein Homology CDS 278 452 . + 0 ID=cds-AC00_RS31790;Parent=gene-AC00_RS31790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AC00_RS31790;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000184.1 RefSeq pseudogene 617 763 . + . ID=gene-AC00_RS31795;Name=AC00_RS31795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31795;partial=true;pseudo=true;start_range=.,617 NZ_JJLU01000184.1 Protein Homology CDS 617 763 . + 0 ID=cds-AC00_RS31795;Parent=gene-AC00_RS31795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AC00_RS31795;partial=true;product=hypothetical protein;pseudo=true;start_range=.,617;transl_table=11 NZ_JJLU01000184.1 RefSeq gene 849 1412 . - . ID=gene-AC00_RS00560;Name=AC00_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00560;old_locus_tag=AC00_5227 NZ_JJLU01000184.1 Protein Homology CDS 849 1412 . - 0 ID=cds-WP_001311069.1;Parent=gene-AC00_RS00560;Dbxref=GenBank:WP_001311069.1;Name=WP_001311069.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052654.1;locus_tag=AC00_RS00560;product=methyltransferase;protein_id=WP_001311069.1;transl_table=11 NZ_JJLU01000184.1 RefSeq gene 1459 2820 . - . ID=gene-AC00_RS00555;Name=AC00_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00555;old_locus_tag=AC00_5228 NZ_JJLU01000184.1 Protein Homology CDS 1459 2820 . - 0 ID=cds-WP_000170713.1;Parent=gene-AC00_RS00555;Dbxref=GenBank:WP_000170713.1;Name=WP_000170713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052653.1;locus_tag=AC00_RS00555;product=DUF3560 domain-containing protein;protein_id=WP_000170713.1;transl_table=11 NZ_JJLU01000184.1 RefSeq gene 2872 3102 . - . ID=gene-AC00_RS0126385;Name=AC00_RS0126385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126385 NZ_JJLU01000184.1 Protein Homology CDS 2872 3102 . - 0 ID=cds-WP_000218647.1;Parent=gene-AC00_RS0126385;Dbxref=GenBank:WP_000218647.1;Name=WP_000218647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052652.1;locus_tag=AC00_RS0126385;product=hypothetical protein;protein_id=WP_000218647.1;transl_table=11 NZ_JJLU01000184.1 RefSeq pseudogene 3326 3445 . - . ID=gene-AC00_RS31670;Name=AC00_RS31670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31670;pseudo=true NZ_JJLU01000184.1 Protein Homology CDS 3326 3445 . - 0 ID=cds-AC00_RS31670;Parent=gene-AC00_RS31670;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001332787.1;locus_tag=AC00_RS31670;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000184.1 RefSeq pseudogene 3619 3773 . + . ID=gene-AC00_RS31800;Name=AC00_RS31800;end_range=3773,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31800;partial=true;pseudo=true NZ_JJLU01000184.1 Protein Homology CDS 3619 3773 . + 0 ID=cds-AC00_RS31800;Parent=gene-AC00_RS31800;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3773,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001358895.1;locus_tag=AC00_RS31800;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000184.1 RefSeq gene 4140 4331 . - . ID=gene-AC00_RS00550;Name=AC00_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00550;old_locus_tag=AC00_5231 NZ_JJLU01000184.1 Protein Homology CDS 4140 4331 . - 0 ID=cds-WP_001027493.1;Parent=gene-AC00_RS00550;Dbxref=GenBank:WP_001027493.1;Name=WP_001027493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AC00_RS00550;product=hypothetical protein;protein_id=WP_001027493.1;transl_table=11 NZ_JJLU01000184.1 RefSeq gene 4328 4750 . - . ID=gene-AC00_RS00545;Name=AC00_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00545;old_locus_tag=AC00_5232 NZ_JJLU01000184.1 Protein Homology CDS 4328 4750 . - 0 ID=cds-WP_000271762.1;Parent=gene-AC00_RS00545;Dbxref=GenBank:WP_000271762.1;Name=WP_000271762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AC00_RS00545;product=DUF1380 family protein;protein_id=WP_000271762.1;transl_table=11 NZ_JJLU01000184.1 RefSeq gene 4797 5222 . - . ID=gene-AC00_RS00540;Name=AC00_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00540;old_locus_tag=AC00_5233 NZ_JJLU01000184.1 Protein Homology CDS 4797 5222 . - 0 ID=cds-WP_001198928.1;Parent=gene-AC00_RS00540;Dbxref=GenBank:WP_001198928.1;Name=WP_001198928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AC00_RS00540;product=antirestriction protein;protein_id=WP_001198928.1;transl_table=11 ##sequence-region NZ_JJLU01000185.1 1 3291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000185.1 RefSeq region 1 3291 . + . ID=NZ_JJLU01000185.1:1..3291;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000185.1 RefSeq pseudogene 1 641 . + . ID=gene-AC00_RS00535;Name=AC00_RS00535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00535;old_locus_tag=AC00_5234;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000185.1 GeneMarkS-2+ CDS 1 641 . + 2 ID=cds-AC00_RS00535;Parent=gene-AC00_RS00535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00535;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000185.1 RefSeq gene 641 856 . + . ID=gene-AC00_RS00530;Name=AC00_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00530;old_locus_tag=AC00_5235 NZ_JJLU01000185.1 GeneMarkS-2+ CDS 641 856 . + 0 ID=cds-WP_032282129.1-2;Parent=gene-AC00_RS00530;Dbxref=GenBank:WP_032282129.1;Name=WP_032282129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00530;product=hypothetical protein;protein_id=WP_032282129.1;transl_table=11 NZ_JJLU01000185.1 RefSeq gene 873 1253 . - . ID=gene-AC00_RS00525;Name=AC00_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00525;old_locus_tag=AC00_5236 NZ_JJLU01000185.1 Protein Homology CDS 873 1253 . - 0 ID=cds-WP_032282128.1-2;Parent=gene-AC00_RS00525;Dbxref=GenBank:WP_032282128.1;Name=WP_032282128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=AC00_RS00525;product=tail fiber assembly protein;protein_id=WP_032282128.1;transl_table=11 NZ_JJLU01000185.1 RefSeq gene 1250 2566 . - . ID=gene-AC00_RS00520;Name=AC00_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00520;old_locus_tag=AC00_5237 NZ_JJLU01000185.1 Protein Homology CDS 1250 2566 . - 0 ID=cds-WP_032282229.1;Parent=gene-AC00_RS00520;Dbxref=GenBank:WP_032282229.1;Name=WP_032282229.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012886586.1;locus_tag=AC00_RS00520;product=phage tail protein;protein_id=WP_032282229.1;transl_table=11 NZ_JJLU01000185.1 RefSeq gene 2563 3174 . - . ID=gene-AC00_RS00515;Name=AC00_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00515;old_locus_tag=AC00_5238 NZ_JJLU01000185.1 Protein Homology CDS 2563 3174 . - 0 ID=cds-WP_032282214.1-2;Parent=gene-AC00_RS00515;Dbxref=GenBank:WP_032282214.1;Name=WP_032282214.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010248708.1;locus_tag=AC00_RS00515;product=phage tail protein I;protein_id=WP_032282214.1;transl_table=11 ##sequence-region NZ_JJLU01000186.1 1 2394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000186.1 RefSeq region 1 2394 . + . ID=NZ_JJLU01000186.1:1..2394;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000186.1 RefSeq gene 133 248 . + . ID=gene-AC00_RS00510;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS00510;old_locus_tag=AC00_5240 NZ_JJLU01000186.1 cmsearch rRNA 133 248 . + . ID=rna-AC00_RS00510;Parent=gene-AC00_RS00510;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS00510;product=5S ribosomal RNA NZ_JJLU01000186.1 cmsearch exon 133 248 . + . ID=exon-AC00_RS00510-1;Parent=rna-AC00_RS00510;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS00510;product=5S ribosomal RNA NZ_JJLU01000186.1 RefSeq gene 263 338 . + . ID=gene-AC00_RS00505;Name=AC00_RS00505;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS00505;old_locus_tag=AC00_5241 NZ_JJLU01000186.1 tRNAscan-SE tRNA 263 338 . + . ID=rna-AC00_RS00505;Parent=gene-AC00_RS00505;anticodon=(pos:296..298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS00505;product=tRNA-Thr NZ_JJLU01000186.1 tRNAscan-SE exon 263 338 . + . ID=exon-AC00_RS00505-1;Parent=rna-AC00_RS00505;anticodon=(pos:296..298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS00505;product=tRNA-Thr NZ_JJLU01000186.1 RefSeq gene 378 493 . + . ID=gene-AC00_RS00500;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC00_RS00500;old_locus_tag=AC00_5242 NZ_JJLU01000186.1 cmsearch rRNA 378 493 . + . ID=rna-AC00_RS00500;Parent=gene-AC00_RS00500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS00500;product=5S ribosomal RNA NZ_JJLU01000186.1 cmsearch exon 378 493 . + . ID=exon-AC00_RS00500-1;Parent=rna-AC00_RS00500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC00_RS00500;product=5S ribosomal RNA NZ_JJLU01000186.1 RefSeq gene 548 624 . + . ID=gene-AC00_RS00495;Name=AC00_RS00495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC00_RS00495;old_locus_tag=AC00_5243 NZ_JJLU01000186.1 tRNAscan-SE tRNA 548 624 . + . ID=rna-AC00_RS00495;Parent=gene-AC00_RS00495;anticodon=(pos:582..584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS00495;product=tRNA-Asp NZ_JJLU01000186.1 tRNAscan-SE exon 548 624 . + . ID=exon-AC00_RS00495-1;Parent=rna-AC00_RS00495;anticodon=(pos:582..584);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC00_RS00495;product=tRNA-Asp NZ_JJLU01000186.1 RefSeq pseudogene 787 1591 . + . ID=gene-AC00_RS0126395;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=pseudogene;locus_tag=AC00_RS0126395;pseudo=true NZ_JJLU01000186.1 Protein Homology CDS 787 1591 . + 0 ID=cds-AC00_RS0126395;Parent=gene-AC00_RS0126395;Note=frameshifted;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414743.1;locus_tag=AC00_RS0126395;product=2%2C5-didehydrogluconate reductase DkgB;pseudo=true;transl_table=11 NZ_JJLU01000186.1 RefSeq gene 1588 2394 . - . ID=gene-AC00_RS00490;Name=AC00_RS00490;end_range=2394,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00490;old_locus_tag=AC00_5246;partial=true NZ_JJLU01000186.1 Protein Homology CDS 1588 2394 . - 0 ID=cds-WP_032288445.1;Parent=gene-AC00_RS00490;Dbxref=GenBank:WP_032288445.1;Name=WP_032288445.1;end_range=2394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308231.1;locus_tag=AC00_RS00490;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_032288445.1;transl_table=11 ##sequence-region NZ_JJLU01000187.1 1 2744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000187.1 RefSeq region 1 2744 . + . ID=NZ_JJLU01000187.1:1..2744;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000187.1 RefSeq gene 1 259 . + . ID=gene-AC00_RS00485;Name=AC00_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00485;old_locus_tag=AC00_5247;partial=true;start_range=.,1 NZ_JJLU01000187.1 Protein Homology CDS 1 259 . + 1 ID=cds-WP_001510179.1-3;Parent=gene-AC00_RS00485;Dbxref=GenBank:WP_001510179.1;Name=WP_001510179.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS00485;partial=true;product=IS1 family transposase;protein_id=WP_001510179.1;start_range=.,1;transl_table=11 NZ_JJLU01000187.1 RefSeq gene 253 414 . - . ID=gene-AC00_RS31025;Name=AC00_RS31025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31025;old_locus_tag=AC00_5248 NZ_JJLU01000187.1 GeneMarkS-2+ CDS 253 414 . - 0 ID=cds-WP_159381338.1;Parent=gene-AC00_RS31025;Dbxref=GenBank:WP_159381338.1;Name=WP_159381338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31025;product=hypothetical protein;protein_id=WP_159381338.1;transl_table=11 NZ_JJLU01000187.1 RefSeq gene 401 2266 . - . ID=gene-AC00_RS00480;Name=AC00_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00480;old_locus_tag=AC00_5249 NZ_JJLU01000187.1 Protein Homology CDS 401 2266 . - 0 ID=cds-WP_050438683.1;Parent=gene-AC00_RS00480;Dbxref=GenBank:WP_050438683.1;Name=WP_050438683.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028277.6;locus_tag=AC00_RS00480;product=TcfC E-set like domain-containing protein;protein_id=WP_050438683.1;transl_table=11 NZ_JJLU01000187.1 RefSeq pseudogene 2472 2744 . + . ID=gene-AC00_RS00475;Name=AC00_RS00475;end_range=2744,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00475;old_locus_tag=AC00_5250;partial=true;pseudo=true NZ_JJLU01000187.1 Protein Homology CDS 2472 2744 . + 0 ID=cds-AC00_RS00475;Parent=gene-AC00_RS00475;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=2744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=AC00_RS00475;partial=true;product=IS1-like element transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000188.1 1 1538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000188.1 RefSeq region 1 1538 . + . ID=NZ_JJLU01000188.1:1..1538;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000188.1 RefSeq gene 1 1453 . - . ID=gene-AC00_RS00470;Name=AC00_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00470;old_locus_tag=AC00_5251;partial=true;start_range=.,1 NZ_JJLU01000188.1 Protein Homology CDS 1 1453 . - 0 ID=cds-WP_032288447.1;Parent=gene-AC00_RS00470;Dbxref=GenBank:WP_032288447.1;Name=WP_032288447.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC00_RS00470;partial=true;product=IS66-like element ISEc43 family transposase;protein_id=WP_032288447.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000189.1 1 16027 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000189.1 RefSeq region 1 16027 . + . ID=NZ_JJLU01000189.1:1..16027;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000189.1 RefSeq gene 1 235 . - . ID=gene-AC00_RS0126400;Name=AC00_RS0126400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126400;old_locus_tag=AC00_5252;partial=true;start_range=.,1 NZ_JJLU01000189.1 Protein Homology CDS 1 235 . - 0 ID=cds-WP_001408888.1-2;Parent=gene-AC00_RS0126400;Dbxref=GenBank:WP_001408888.1;Name=WP_001408888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0126400;partial=true;product=IS1-like element transposase;protein_id=WP_001408888.1;start_range=.,1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 269 1537 . - . ID=gene-AC00_RS00465;Name=uidB;gbkey=Gene;gene=uidB;gene_biotype=protein_coding;locus_tag=AC00_RS00465;old_locus_tag=AC00_5253 NZ_JJLU01000189.1 Protein Homology CDS 269 1537 . - 0 ID=cds-WP_032280929.1;Parent=gene-AC00_RS00465;Dbxref=GenBank:WP_032280929.1;Name=WP_032280929.1;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;gene=uidB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075828.1;locus_tag=AC00_RS00465;product=glucuronide transporter;protein_id=WP_032280929.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 1534 3345 . - . ID=gene-AC00_RS00460;Name=uidA;gbkey=Gene;gene=uidA;gene_biotype=protein_coding;locus_tag=AC00_RS00460;old_locus_tag=AC00_5254 NZ_JJLU01000189.1 Protein Homology CDS 1534 3345 . - 0 ID=cds-WP_032280930.1;Parent=gene-AC00_RS00460;Dbxref=GenBank:WP_032280930.1;Name=WP_032280930.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=uidA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416134.1;locus_tag=AC00_RS00460;product=beta-glucuronidase;protein_id=WP_032280930.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 3736 4326 . - . ID=gene-AC00_RS00455;Name=uidR;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=AC00_RS00455;old_locus_tag=AC00_5255 NZ_JJLU01000189.1 Protein Homology CDS 3736 4326 . - 0 ID=cds-WP_000969094.1;Parent=gene-AC00_RS00455;Dbxref=GenBank:WP_000969094.1;Name=WP_000969094.1;gbkey=CDS;gene=uidR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310353.1;locus_tag=AC00_RS00455;product=DNA-binding transcriptional regulator UidR;protein_id=WP_000969094.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 4555 5322 . - . ID=gene-AC00_RS00450;Name=hdhA;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=AC00_RS00450;old_locus_tag=AC00_5256 NZ_JJLU01000189.1 Protein Homology CDS 4555 5322 . - 0 ID=cds-WP_000483353.1;Parent=gene-AC00_RS00450;Dbxref=GenBank:WP_000483353.1;Name=WP_000483353.1;gbkey=CDS;gene=hdhA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310354.1;locus_tag=AC00_RS00450;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=WP_000483353.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 5434 6462 . - . ID=gene-AC00_RS00445;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=AC00_RS00445;old_locus_tag=AC00_5257 NZ_JJLU01000189.1 Protein Homology CDS 5434 6462 . - 0 ID=cds-WP_032280932.1;Parent=gene-AC00_RS00445;Dbxref=GenBank:WP_032280932.1;Name=WP_032280932.1;gbkey=CDS;gene=malI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310355.1;locus_tag=AC00_RS00445;product=mal regulon transcriptional regulator MalI;protein_id=WP_032280932.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 6637 8229 . + . ID=gene-AC00_RS00440;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=AC00_RS00440;old_locus_tag=AC00_5258 NZ_JJLU01000189.1 Protein Homology CDS 6637 8229 . + 0 ID=cds-WP_032280933.1;Parent=gene-AC00_RS00440;Dbxref=GenBank:WP_032280933.1;Name=WP_032280933.1;gbkey=CDS;gene=malX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416138.1;locus_tag=AC00_RS00440;product=PTS maltose transporter subunit IICB;protein_id=WP_032280933.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 8239 9411 . + . ID=gene-AC00_RS00435;Name=malY;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=AC00_RS00435;old_locus_tag=AC00_5259 NZ_JJLU01000189.1 Protein Homology CDS 8239 9411 . + 0 ID=cds-WP_032280934.1;Parent=gene-AC00_RS00435;Dbxref=GenBank:WP_032280934.1;Name=WP_032280934.1;gbkey=CDS;gene=malY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310357.1;locus_tag=AC00_RS00435;product=bifunctional maltose regulon transcriptional repressor/cystathionine beta-lyase MalY;protein_id=WP_032280934.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 9515 10516 . + . ID=gene-AC00_RS00430;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=AC00_RS00430;old_locus_tag=AC00_5260 NZ_JJLU01000189.1 Protein Homology CDS 9515 10516 . + 0 ID=cds-WP_032280935.1;Parent=gene-AC00_RS00430;Dbxref=GenBank:WP_032280935.1;Name=WP_032280935.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416140.1;locus_tag=AC00_RS00430;product=adenosine deaminase;protein_id=WP_032280935.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 10552 11592 . - . ID=gene-AC00_RS00425;Name=AC00_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00425;old_locus_tag=AC00_5261 NZ_JJLU01000189.1 Protein Homology CDS 10552 11592 . - 0 ID=cds-WP_032280936.1;Parent=gene-AC00_RS00425;Dbxref=GenBank:WP_032280936.1;Name=WP_032280936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=AC00_RS00425;product=oxidoreductase;protein_id=WP_032280936.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 11837 11962 . + . ID=gene-AC00_RS0126405;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=AC00_RS0126405 NZ_JJLU01000189.1 Protein Homology CDS 11837 11962 . + 0 ID=cds-WP_001296096.1;Parent=gene-AC00_RS0126405;Dbxref=GenBank:WP_001296096.1;Name=WP_001296096.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310360.1;locus_tag=AC00_RS0126405;product=division septum protein Blr;protein_id=WP_001296096.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 12235 12450 . + . ID=gene-AC00_RS00420;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=AC00_RS00420;old_locus_tag=AC00_5262 NZ_JJLU01000189.1 Protein Homology CDS 12235 12450 . + 0 ID=cds-WP_000217950.1;Parent=gene-AC00_RS00420;Dbxref=GenBank:WP_000217950.1;Name=WP_000217950.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310361.1;locus_tag=AC00_RS00420;product=transcription modulator YdgT;protein_id=WP_000217950.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 12536 12976 . + . ID=gene-AC00_RS00415;Name=AC00_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00415;old_locus_tag=AC00_5263 NZ_JJLU01000189.1 Protein Homology CDS 12536 12976 . + 0 ID=cds-WP_001302052.1;Parent=gene-AC00_RS00415;Dbxref=GenBank:WP_001302052.1;Name=WP_001302052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310362.2;locus_tag=AC00_RS00415;product=DUF2569 domain-containing protein;protein_id=WP_001302052.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 13053 13634 . + . ID=gene-AC00_RS00410;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=AC00_RS00410;old_locus_tag=AC00_5264 NZ_JJLU01000189.1 Protein Homology CDS 13053 13634 . + 0 ID=cds-WP_000133193.1;Parent=gene-AC00_RS00410;Dbxref=GenBank:WP_000133193.1;Name=WP_000133193.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=AC00_RS00410;product=electron transport complex subunit RsxA;protein_id=WP_000133193.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 13634 14212 . + . ID=gene-AC00_RS00405;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=AC00_RS00405;old_locus_tag=AC00_5265 NZ_JJLU01000189.1 Protein Homology CDS 13634 14212 . + 0 ID=cds-WP_000991809.1;Parent=gene-AC00_RS00405;Dbxref=GenBank:WP_000991809.1;Name=WP_000991809.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310364.1;locus_tag=AC00_RS00405;product=electron transport complex subunit RsxB;protein_id=WP_000991809.1;transl_table=11 NZ_JJLU01000189.1 RefSeq gene 14205 16027 . + . ID=gene-AC00_RS00400;Name=rsxC;end_range=16027,.;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=AC00_RS00400;old_locus_tag=AC00_5266;partial=true NZ_JJLU01000189.1 Protein Homology CDS 14205 16027 . + 0 ID=cds-WP_032288448.1;Parent=gene-AC00_RS00400;Dbxref=GenBank:WP_032288448.1;Name=WP_032288448.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;end_range=16027,.;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416146.1;locus_tag=AC00_RS00400;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_032288448.1;transl_table=11 ##sequence-region NZ_JJLU01000190.1 1 5313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000190.1 RefSeq region 1 5313 . + . ID=NZ_JJLU01000190.1:1..5313;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000190.1 RefSeq gene 1 279 . - . ID=gene-AC00_RS00395;Name=AC00_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00395;old_locus_tag=AC00_5267;partial=true;start_range=.,1 NZ_JJLU01000190.1 Protein Homology CDS 1 279 . - 0 ID=cds-WP_032173913.1;Parent=gene-AC00_RS00395;Dbxref=GenBank:WP_032173913.1;Name=WP_032173913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS00395;partial=true;product=IS5/IS1182 family transposase;protein_id=WP_032173913.1;start_range=.,1;transl_table=11 NZ_JJLU01000190.1 RefSeq pseudogene 403 552 . + . ID=gene-AC00_RS30740;Name=AC00_RS30740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30740;old_locus_tag=AC00_5268;partial=true;pseudo=true;start_range=.,403 NZ_JJLU01000190.1 Protein Homology CDS 403 552 . + 0 ID=cds-AC00_RS30740;Parent=gene-AC00_RS30740;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612086.1;locus_tag=AC00_RS30740;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,403;transl_table=11 NZ_JJLU01000190.1 RefSeq pseudogene 593 1057 . - . ID=gene-AC00_RS29045;Name=AC00_RS29045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29045;partial=true;pseudo=true;start_range=.,593 NZ_JJLU01000190.1 Protein Homology CDS 593 1057 . - 0 ID=cds-AC00_RS29045;Parent=gene-AC00_RS29045;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001478804.1;locus_tag=AC00_RS29045;partial=true;product=replication initiation protein;pseudo=true;start_range=.,593;transl_table=11 NZ_JJLU01000190.1 RefSeq pseudogene 1819 1971 . + . ID=gene-AC00_RS29050;Name=AC00_RS29050;end_range=1971,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29050;old_locus_tag=AC00_5269;partial=true;pseudo=true;start_range=.,1819 NZ_JJLU01000190.1 Protein Homology CDS 1819 1971 . + 0 ID=cds-AC00_RS29050;Parent=gene-AC00_RS29050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343765.1;locus_tag=AC00_RS29050;partial=true;product=ISL3 family transposase;pseudo=true;start_range=.,1819;transl_table=11 NZ_JJLU01000190.1 RefSeq pseudogene 2074 2633 . + . ID=gene-AC00_RS29055;Name=istB;gbkey=Gene;gene=istB;gene_biotype=pseudogene;locus_tag=AC00_RS29055;old_locus_tag=AC00_5270;partial=true;pseudo=true;start_range=.,2074 NZ_JJLU01000190.1 Protein Homology CDS 2074 2633 . + 0 ID=cds-AC00_RS29055;Parent=gene-AC00_RS29055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544830.1;locus_tag=AC00_RS29055;partial=true;product=IS21-like element IS21 family helper ATPase IstB;pseudo=true;start_range=.,2074;transl_table=11 NZ_JJLU01000190.1 RefSeq pseudogene 2706 2933 . + . ID=gene-AC00_RS00390;Name=AC00_RS00390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00390;old_locus_tag=AC00_5272;partial=true;pseudo=true;start_range=.,2706 NZ_JJLU01000190.1 Protein Homology CDS 2706 2933 . + 0 ID=cds-AC00_RS00390;Parent=gene-AC00_RS00390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000343760.1;locus_tag=AC00_RS00390;partial=true;product=transposase;pseudo=true;start_range=.,2706;transl_table=11 NZ_JJLU01000190.1 RefSeq gene 3728 4162 . + . ID=gene-AC00_RS00385;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AC00_RS00385;old_locus_tag=AC00_5273 NZ_JJLU01000190.1 Protein Homology CDS 3728 4162 . + 0 ID=cds-WP_032237880.1;Parent=gene-AC00_RS00385;Dbxref=GenBank:WP_032237880.1;Name=WP_032237880.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AC00_RS00385;product=conjugation system SOS inhibitor PsiB;protein_id=WP_032237880.1;transl_table=11 NZ_JJLU01000190.1 RefSeq pseudogene 4313 4513 . + . ID=gene-AC00_RS00380;Name=AC00_RS00380;end_range=4513,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00380;old_locus_tag=AC00_5274;partial=true;pseudo=true NZ_JJLU01000190.1 Protein Homology CDS 4313 4513 . + 0 ID=cds-AC00_RS00380;Parent=gene-AC00_RS00380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015869530.1;locus_tag=AC00_RS00380;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_JJLU01000190.1 RefSeq pseudogene 4568 4890 . + . ID=gene-AC00_RS00375;Name=AC00_RS00375;end_range=4890,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00375;old_locus_tag=AC00_5275;partial=true;pseudo=true NZ_JJLU01000190.1 Protein Homology CDS 4568 4890 . + 0 ID=cds-AC00_RS00375;Parent=gene-AC00_RS00375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4890,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558160.1;locus_tag=AC00_RS00375;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JJLU01000190.1 cmsearch sequence_feature 4848 4916 . + . ID=id-NZ_JJLU01000190.1:4848..4916;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JJLU01000190.1 RefSeq pseudogene 4949 5044 . - . ID=gene-AC00_RS30750;Name=AC00_RS30750;end_range=5044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS30750;partial=true;pseudo=true NZ_JJLU01000190.1 Protein Homology CDS 4949 5044 . - 0 ID=cds-AC00_RS30750;Parent=gene-AC00_RS30750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099160.1;locus_tag=AC00_RS30750;partial=true;product=transposase domain-containing protein;pseudo=true;transl_table=11 NZ_JJLU01000190.1 RefSeq gene 5078 5313 . - . ID=gene-AC00_RS00370;Name=AC00_RS00370;end_range=5313,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00370;old_locus_tag=AC00_5276;partial=true NZ_JJLU01000190.1 Protein Homology CDS 5078 5313 . - 2 ID=cds-WP_032282349.1;Parent=gene-AC00_RS00370;Dbxref=GenBank:WP_032282349.1;Name=WP_032282349.1;end_range=5313,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611684.1;locus_tag=AC00_RS00370;partial=true;product=transposase domain-containing protein;protein_id=WP_032282349.1;transl_table=11 ##sequence-region NZ_JJLU01000191.1 1 827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000191.1 RefSeq region 1 827 . + . ID=NZ_JJLU01000191.1:1..827;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000191.1 RefSeq gene 1 324 . + . ID=gene-AC00_RS00365;Name=AC00_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00365;old_locus_tag=AC00_5277;partial=true;start_range=.,1 NZ_JJLU01000191.1 Protein Homology CDS 1 324 . + 0 ID=cds-WP_032282150.1;Parent=gene-AC00_RS00365;Dbxref=GenBank:WP_032282150.1;Name=WP_032282150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000429833.1;locus_tag=AC00_RS00365;partial=true;product=MerR family DNA-binding protein;protein_id=WP_032282150.1;start_range=.,1;transl_table=11 NZ_JJLU01000191.1 RefSeq gene 395 827 . + . ID=gene-AC00_RS29060;Name=AC00_RS29060;end_range=827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29060;old_locus_tag=AC00_5278;partial=true NZ_JJLU01000191.1 Protein Homology CDS 395 827 . + 0 ID=cds-WP_001421699.1;Parent=gene-AC00_RS29060;Dbxref=GenBank:WP_001421699.1;Name=WP_001421699.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=827,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001362728.1;locus_tag=AC00_RS29060;partial=true;product=transposase;protein_id=WP_001421699.1;transl_table=11 ##sequence-region NZ_JJLU01000192.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000192.1 RefSeq region 1 3597 . + . ID=NZ_JJLU01000192.1:1..3597;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000192.1 RefSeq pseudogene 1 683 . + . ID=gene-AC00_RS31030;Name=AC00_RS31030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31030;old_locus_tag=AC00_5279;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000192.1 Protein Homology CDS 1 683 . + 2 ID=cds-AC00_RS31030;Parent=gene-AC00_RS31030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848316.1;locus_tag=AC00_RS31030;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000192.1 RefSeq gene 680 1060 . + . ID=gene-AC00_RS00355;Name=AC00_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00355;old_locus_tag=AC00_5280 NZ_JJLU01000192.1 Protein Homology CDS 680 1060 . + 0 ID=cds-WP_032282128.1-3;Parent=gene-AC00_RS00355;Dbxref=GenBank:WP_032282128.1;Name=WP_032282128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=AC00_RS00355;product=tail fiber assembly protein;protein_id=WP_032282128.1;transl_table=11 NZ_JJLU01000192.1 RefSeq gene 1077 1292 . - . ID=gene-AC00_RS00350;Name=AC00_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00350;old_locus_tag=AC00_5281 NZ_JJLU01000192.1 GeneMarkS-2+ CDS 1077 1292 . - 0 ID=cds-WP_032282129.1-3;Parent=gene-AC00_RS00350;Dbxref=GenBank:WP_032282129.1;Name=WP_032282129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00350;product=hypothetical protein;protein_id=WP_032282129.1;transl_table=11 NZ_JJLU01000192.1 RefSeq gene 1292 1825 . - . ID=gene-AC00_RS30760;Name=AC00_RS30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30760;old_locus_tag=AC00_5282 NZ_JJLU01000192.1 GeneMarkS-2+ CDS 1292 1825 . - 0 ID=cds-WP_050438684.1;Parent=gene-AC00_RS30760;Dbxref=GenBank:WP_050438684.1;Name=WP_050438684.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS30760;product=hypothetical protein;protein_id=WP_050438684.1;transl_table=11 NZ_JJLU01000192.1 RefSeq gene 2027 2419 . + . ID=gene-AC00_RS00340;Name=AC00_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00340;old_locus_tag=AC00_5283 NZ_JJLU01000192.1 GeneMarkS-2+ CDS 2027 2419 . + 0 ID=cds-WP_032282135.1-2;Parent=gene-AC00_RS00340;Dbxref=GenBank:WP_032282135.1;Name=WP_032282135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00340;product=hypothetical protein;protein_id=WP_032282135.1;transl_table=11 NZ_JJLU01000192.1 RefSeq gene 2472 3029 . + . ID=gene-AC00_RS00335;Name=AC00_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00335;old_locus_tag=AC00_5284 NZ_JJLU01000192.1 Protein Homology CDS 2472 3029 . + 0 ID=cds-WP_032282131.1-2;Parent=gene-AC00_RS00335;Dbxref=GenBank:WP_032282131.1;Name=WP_032282131.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195984.1;locus_tag=AC00_RS00335;product=recombinase family protein;protein_id=WP_032282131.1;transl_table=11 NZ_JJLU01000192.1 RefSeq pseudogene 3132 3597 . + . ID=gene-AC00_RS00330;Name=AC00_RS00330;end_range=3597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00330;old_locus_tag=AC00_5285;partial=true;pseudo=true NZ_JJLU01000192.1 Protein Homology CDS 3132 3597 . + 0 ID=cds-AC00_RS00330;Parent=gene-AC00_RS00330;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226043.1;locus_tag=AC00_RS00330;partial=true;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000193.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000193.1 RefSeq region 1 720 . + . ID=NZ_JJLU01000193.1:1..720;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000193.1 RefSeq gene 1 720 . + . ID=gene-AC00_RS00325;Name=AC00_RS00325;end_range=720,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00325;old_locus_tag=AC00_5286;partial=true;start_range=.,1 NZ_JJLU01000193.1 Protein Homology CDS 1 720 . + 2 ID=cds-WP_032288450.1;Parent=gene-AC00_RS00325;Dbxref=GenBank:WP_032288450.1;Name=WP_032288450.1;end_range=720,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=AC00_RS00325;partial=true;product=elongation factor Tu;protein_id=WP_032288450.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000194.1 1 458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000194.1 RefSeq region 1 458 . + . ID=NZ_JJLU01000194.1:1..458;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000194.1 RefSeq gene 1 243 . - . ID=gene-AC00_RS31080;Name=AC00_RS31080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31080;partial=true;start_range=.,1 NZ_JJLU01000194.1 GeneMarkS-2+ CDS 1 243 . - 0 ID=cds-WP_071988032.1;Parent=gene-AC00_RS31080;Dbxref=GenBank:WP_071988032.1;Name=WP_071988032.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31080;partial=true;product=hypothetical protein;protein_id=WP_071988032.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000195.1 1 3597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000195.1 RefSeq region 1 3597 . + . ID=NZ_JJLU01000195.1:1..3597;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000195.1 RefSeq pseudogene 1 641 . + . ID=gene-AC00_RS00320;Name=AC00_RS00320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00320;old_locus_tag=AC00_5288;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000195.1 GeneMarkS-2+ CDS 1 641 . + 2 ID=cds-AC00_RS00320;Parent=gene-AC00_RS00320;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00320;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000195.1 RefSeq gene 641 856 . + . ID=gene-AC00_RS00315;Name=AC00_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00315;old_locus_tag=AC00_5289 NZ_JJLU01000195.1 GeneMarkS-2+ CDS 641 856 . + 0 ID=cds-WP_032282129.1-4;Parent=gene-AC00_RS00315;Dbxref=GenBank:WP_032282129.1;Name=WP_032282129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00315;product=hypothetical protein;protein_id=WP_032282129.1;transl_table=11 NZ_JJLU01000195.1 RefSeq gene 873 1253 . - . ID=gene-AC00_RS00310;Name=AC00_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00310;old_locus_tag=AC00_5290 NZ_JJLU01000195.1 Protein Homology CDS 873 1253 . - 0 ID=cds-WP_032282128.1-4;Parent=gene-AC00_RS00310;Dbxref=GenBank:WP_032282128.1;Name=WP_032282128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=AC00_RS00310;product=tail fiber assembly protein;protein_id=WP_032282128.1;transl_table=11 NZ_JJLU01000195.1 RefSeq gene 1250 1891 . - . ID=gene-AC00_RS31035;Name=AC00_RS31035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31035;old_locus_tag=AC00_5291 NZ_JJLU01000195.1 GeneMarkS-2+ CDS 1250 1891 . - 0 ID=cds-WP_050438686.1;Parent=gene-AC00_RS31035;Dbxref=GenBank:WP_050438686.1;Name=WP_050438686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31035;product=hypothetical protein;protein_id=WP_050438686.1;transl_table=11 NZ_JJLU01000195.1 RefSeq gene 2027 2419 . + . ID=gene-AC00_RS00305;Name=AC00_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00305;old_locus_tag=AC00_5292 NZ_JJLU01000195.1 GeneMarkS-2+ CDS 2027 2419 . + 0 ID=cds-WP_032282135.1-3;Parent=gene-AC00_RS00305;Dbxref=GenBank:WP_032282135.1;Name=WP_032282135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS00305;product=hypothetical protein;protein_id=WP_032282135.1;transl_table=11 NZ_JJLU01000195.1 RefSeq gene 2472 3029 . + . ID=gene-AC00_RS00300;Name=AC00_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00300;old_locus_tag=AC00_5293 NZ_JJLU01000195.1 Protein Homology CDS 2472 3029 . + 0 ID=cds-WP_032282131.1-3;Parent=gene-AC00_RS00300;Dbxref=GenBank:WP_032282131.1;Name=WP_032282131.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001195984.1;locus_tag=AC00_RS00300;product=recombinase family protein;protein_id=WP_032282131.1;transl_table=11 NZ_JJLU01000195.1 RefSeq pseudogene 3132 3597 . + . ID=gene-AC00_RS00295;Name=AC00_RS00295;end_range=3597,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00295;old_locus_tag=AC00_5294;partial=true;pseudo=true NZ_JJLU01000195.1 Protein Homology CDS 3132 3597 . + 0 ID=cds-AC00_RS00295;Parent=gene-AC00_RS00295;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3597,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226043.1;locus_tag=AC00_RS00295;partial=true;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000196.1 1 9037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000196.1 RefSeq region 1 9037 . + . ID=NZ_JJLU01000196.1:1..9037;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000196.1 RefSeq pseudogene 1 689 . + . ID=gene-AC00_RS00290;Name=AC00_RS00290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00290;old_locus_tag=AC00_5295;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000196.1 Protein Homology CDS 1 689 . + 2 ID=cds-AC00_RS00290;Parent=gene-AC00_RS00290;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC00_RS00290;partial=true;product=IS66-like element ISEc22 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000196.1 RefSeq gene 756 944 . + . ID=gene-AC00_RS00285;Name=AC00_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00285;old_locus_tag=AC00_5296 NZ_JJLU01000196.1 Protein Homology CDS 756 944 . + 0 ID=cds-WP_000035067.1;Parent=gene-AC00_RS00285;Dbxref=GenBank:WP_000035067.1;Name=WP_000035067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000035067.1;locus_tag=AC00_RS00285;product=hypothetical protein;protein_id=WP_000035067.1;transl_table=11 NZ_JJLU01000196.1 RefSeq gene 962 3322 . - . ID=gene-AC00_RS00280;Name=AC00_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00280;old_locus_tag=AC00_5297 NZ_JJLU01000196.1 Protein Homology CDS 962 3322 . - 0 ID=cds-WP_000233440.1;Parent=gene-AC00_RS00280;Dbxref=GenBank:WP_000233440.1;Name=WP_000233440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000233439.1;locus_tag=AC00_RS00280;product=TOTE conflict system archaeo-eukaryotic primase domain-containing protein;protein_id=WP_000233440.1;transl_table=11 NZ_JJLU01000196.1 RefSeq gene 3477 4040 . - . ID=gene-AC00_RS00275;Name=AC00_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00275;old_locus_tag=AC00_5298 NZ_JJLU01000196.1 Protein Homology CDS 3477 4040 . - 0 ID=cds-WP_000282072.1;Parent=gene-AC00_RS00275;Dbxref=GenBank:WP_000282072.1;Name=WP_000282072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309331.1;locus_tag=AC00_RS00275;product=inovirus-type Gp2 protein;protein_id=WP_000282072.1;transl_table=11 NZ_JJLU01000196.1 RefSeq gene 5377 7212 . - . ID=gene-AC00_RS00270;Name=AC00_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00270;old_locus_tag=AC00_5299 NZ_JJLU01000196.1 Protein Homology CDS 5377 7212 . - 0 ID=cds-WP_032180577.1;Parent=gene-AC00_RS00270;Dbxref=GenBank:WP_032180577.1;Name=WP_032180577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001258873.1;locus_tag=AC00_RS00270;product=hypothetical protein;protein_id=WP_032180577.1;transl_table=11 NZ_JJLU01000196.1 RefSeq gene 7313 7600 . + . ID=gene-AC00_RS0126435;Name=AC00_RS0126435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126435 NZ_JJLU01000196.1 Protein Homology CDS 7313 7600 . + 0 ID=cds-WP_000070932.1;Parent=gene-AC00_RS0126435;Dbxref=GenBank:WP_000070932.1;Name=WP_000070932.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000070930.1;locus_tag=AC00_RS0126435;product=helix-turn-helix transcriptional regulator;protein_id=WP_000070932.1;transl_table=11 NZ_JJLU01000196.1 RefSeq gene 7575 9037 . + . ID=gene-AC00_RS00265;Name=AC00_RS00265;end_range=9037,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00265;old_locus_tag=AC00_5300;partial=true NZ_JJLU01000196.1 Protein Homology CDS 7575 9037 . + 0 ID=cds-WP_032288452.1;Parent=gene-AC00_RS00265;Dbxref=GenBank:WP_032288452.1;Name=WP_032288452.1;end_range=9037,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208608.1;locus_tag=AC00_RS00265;partial=true;product=DUF3987 domain-containing protein;protein_id=WP_032288452.1;transl_table=11 ##sequence-region NZ_JJLU01000197.1 1 1348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000197.1 RefSeq region 1 1348 . + . ID=NZ_JJLU01000197.1:1..1348;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000197.1 RefSeq pseudogene 1 1348 . + . ID=gene-AC00_RS00260;Name=AC00_RS00260;end_range=1348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00260;old_locus_tag=AC00_5301;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000197.1 Protein Homology CDS 1 1348 . + 2 ID=cds-AC00_RS00260;Parent=gene-AC00_RS00260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1348,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312507.1;locus_tag=AC00_RS00260;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JJLU01000198.1 1 1747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000198.1 RefSeq region 1 1747 . + . ID=NZ_JJLU01000198.1:1..1747;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000198.1 RefSeq gene 1 1388 . - . ID=gene-AC00_RS29075;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=AC00_RS29075;old_locus_tag=AC00_5302;partial=true;start_range=.,1 NZ_JJLU01000198.1 Protein Homology CDS 1 1388 . - 0 ID=cds-WP_077757457.1;Parent=gene-AC00_RS29075;Dbxref=GenBank:WP_077757457.1;Name=WP_077757457.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998048.1;locus_tag=AC00_RS29075;partial=true;product=IS66 family transposase;protein_id=WP_077757457.1;start_range=.,1;transl_table=11 NZ_JJLU01000198.1 RefSeq pseudogene 1343 1579 . - . ID=gene-AC00_RS0126445;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=AC00_RS0126445;old_locus_tag=AC00_5303;partial=true;pseudo=true;start_range=.,1343 NZ_JJLU01000198.1 Protein Homology CDS 1343 1579 . - 0 ID=cds-AC00_RS0126445;Parent=gene-AC00_RS0126445;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536669.1;locus_tag=AC00_RS0126445;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;pseudo=true;start_range=.,1343;transl_table=11 ##sequence-region NZ_JJLU01000199.1 1 11858 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000199.1 RefSeq region 1 11858 . + . ID=NZ_JJLU01000199.1:1..11858;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000199.1 RefSeq gene 1 206 . - . ID=gene-AC00_RS00245;Name=AC00_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00245;old_locus_tag=AC00_5305;partial=true;start_range=.,1 NZ_JJLU01000199.1 Protein Homology CDS 1 206 . - 0 ID=cds-WP_004018154.1-2;Parent=gene-AC00_RS00245;Dbxref=GenBank:WP_004018154.1;Name=WP_004018154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309431.1;locus_tag=AC00_RS00245;partial=true;product=DUF987 domain-containing protein;protein_id=WP_004018154.1;start_range=.,1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 275 751 . - . ID=gene-AC00_RS00240;Name=AC00_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00240;old_locus_tag=AC00_5306 NZ_JJLU01000199.1 Protein Homology CDS 275 751 . - 0 ID=cds-WP_001186726.1;Parent=gene-AC00_RS00240;Dbxref=GenBank:WP_001186726.1;Name=WP_001186726.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309430.1;locus_tag=AC00_RS00240;product=JAB domain-containing protein;protein_id=WP_001186726.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 767 1252 . - . ID=gene-AC00_RS00235;Name=AC00_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00235;old_locus_tag=AC00_5307 NZ_JJLU01000199.1 Protein Homology CDS 767 1252 . - 0 ID=cds-WP_032216557.1;Parent=gene-AC00_RS00235;Dbxref=GenBank:WP_032216557.1;Name=WP_032216557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309429.1;locus_tag=AC00_RS00235;product=antirestriction protein;protein_id=WP_032216557.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 1344 2162 . - . ID=gene-AC00_RS00230;Name=AC00_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00230;old_locus_tag=AC00_5308 NZ_JJLU01000199.1 Protein Homology CDS 1344 2162 . - 0 ID=cds-WP_001175151.1;Parent=gene-AC00_RS00230;Dbxref=GenBank:WP_001175151.1;Name=WP_001175151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309428.1;locus_tag=AC00_RS00230;product=DUF932 domain-containing protein;protein_id=WP_001175151.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 2252 2485 . - . ID=gene-AC00_RS00225;Name=AC00_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00225;old_locus_tag=AC00_5309 NZ_JJLU01000199.1 Protein Homology CDS 2252 2485 . - 0 ID=cds-WP_001278287.1;Parent=gene-AC00_RS00225;Dbxref=GenBank:WP_001278287.1;Name=WP_001278287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278287.1;locus_tag=AC00_RS00225;product=DUF905 family protein;protein_id=WP_001278287.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 2491 3168 . - . ID=gene-AC00_RS00220;Name=AC00_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00220;old_locus_tag=AC00_5310 NZ_JJLU01000199.1 Protein Homology CDS 2491 3168 . - 0 ID=cds-WP_001097301.1;Parent=gene-AC00_RS00220;Dbxref=GenBank:WP_001097301.1;Name=WP_001097301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097314.1;locus_tag=AC00_RS00220;product=hypothetical protein;protein_id=WP_001097301.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 3316 3996 . - . ID=gene-AC00_RS00215;Name=AC00_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00215;old_locus_tag=AC00_5311 NZ_JJLU01000199.1 Protein Homology CDS 3316 3996 . - 0 ID=cds-WP_001282919.1;Parent=gene-AC00_RS00215;Dbxref=GenBank:WP_001282919.1;Name=WP_001282919.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001278649.1;locus_tag=AC00_RS00215;product=helix-turn-helix transcriptional regulator;protein_id=WP_001282919.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 4199 5083 . - . ID=gene-AC00_RS00205;Name=AC00_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00205;old_locus_tag=AC00_5313 NZ_JJLU01000199.1 Protein Homology CDS 4199 5083 . - 0 ID=cds-WP_000010391.1;Parent=gene-AC00_RS00205;Dbxref=GenBank:WP_000010391.1;Name=WP_000010391.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001557377.1;locus_tag=AC00_RS00205;product=GTPase family protein;protein_id=WP_000010391.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 5268 6398 . + . ID=gene-AC00_RS00200;Name=AC00_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00200;old_locus_tag=AC00_5314 NZ_JJLU01000199.1 Protein Homology CDS 5268 6398 . + 0 ID=cds-WP_032282140.1;Parent=gene-AC00_RS00200;Dbxref=GenBank:WP_032282140.1;Name=WP_032282140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147750.1;locus_tag=AC00_RS00200;product=hypothetical protein;protein_id=WP_032282140.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 7966 8697 . + . ID=gene-AC00_RS00195;Name=AC00_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00195;old_locus_tag=AC00_5316 NZ_JJLU01000199.1 Protein Homology CDS 7966 8697 . + 0 ID=cds-WP_032282141.1;Parent=gene-AC00_RS00195;Dbxref=GenBank:WP_032282141.1;Name=WP_032282141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001075464.1;locus_tag=AC00_RS00195;product=inovirus Gp2 family protein;protein_id=WP_032282141.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 9056 9616 . + . ID=gene-AC00_RS00190;Name=AC00_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00190;old_locus_tag=AC00_5317 NZ_JJLU01000199.1 Protein Homology CDS 9056 9616 . + 0 ID=cds-WP_032216519.1;Parent=gene-AC00_RS00190;Dbxref=GenBank:WP_032216519.1;Name=WP_032216519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000991585.1;locus_tag=AC00_RS00190;product=hypothetical protein;protein_id=WP_032216519.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 9685 9915 . + . ID=gene-AC00_RS00185;Name=AC00_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00185;old_locus_tag=AC00_5318 NZ_JJLU01000199.1 Protein Homology CDS 9685 9915 . + 0 ID=cds-WP_032216528.1;Parent=gene-AC00_RS00185;Dbxref=GenBank:WP_032216528.1;Name=WP_032216528.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958493.1;locus_tag=AC00_RS00185;product=helix-turn-helix transcriptional regulator;protein_id=WP_032216528.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 10183 10683 . + . ID=gene-AC00_RS0126450;Name=AC00_RS0126450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126450 NZ_JJLU01000199.1 Protein Homology CDS 10183 10683 . + 0 ID=cds-WP_032216520.1;Parent=gene-AC00_RS0126450;Dbxref=GenBank:WP_032216520.1;Name=WP_032216520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309403.1;locus_tag=AC00_RS0126450;product=hypothetical protein;protein_id=WP_032216520.1;transl_table=11 NZ_JJLU01000199.1 RefSeq gene 10772 11395 . + . ID=gene-AC00_RS00180;Name=AC00_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00180;old_locus_tag=AC00_5321 NZ_JJLU01000199.1 Protein Homology CDS 10772 11395 . + 0 ID=cds-WP_032216521.1;Parent=gene-AC00_RS00180;Dbxref=GenBank:WP_032216521.1;Name=WP_032216521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309404.1;locus_tag=AC00_RS00180;product=hypothetical protein;protein_id=WP_032216521.1;transl_table=11 NZ_JJLU01000199.1 RefSeq pseudogene 11465 11566 . + . ID=gene-AC00_RS31475;Name=AC00_RS31475;end_range=11566,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31475;partial=true;pseudo=true NZ_JJLU01000199.1 Protein Homology CDS 11465 11566 . + 0 ID=cds-AC00_RS31475;Parent=gene-AC00_RS31475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11566,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562070.1;locus_tag=AC00_RS31475;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000199.1 RefSeq pseudogene 11567 11858 . - . ID=gene-AC00_RS0126455;Name=AC00_RS0126455;end_range=11858,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0126455;old_locus_tag=AC00_5322;partial=true;pseudo=true;start_range=.,11567 NZ_JJLU01000199.1 Protein Homology CDS 11567 11858 . - 1 ID=cds-AC00_RS0126455;Parent=gene-AC00_RS0126455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11858,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=AC00_RS0126455;partial=true;product=transposase;pseudo=true;start_range=.,11567;transl_table=11 ##sequence-region NZ_JJLU01000200.1 1 29931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000200.1 RefSeq region 1 29931 . + . ID=NZ_JJLU01000200.1:1..29931;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000200.1 RefSeq gene 1 1097 . + . ID=gene-AC00_RS29090;Name=AC00_RS29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29090;old_locus_tag=AC00_5323;partial=true;start_range=.,1 NZ_JJLU01000200.1 Protein Homology CDS 1 1097 . + 2 ID=cds-WP_050438688.1;Parent=gene-AC00_RS29090;Dbxref=GenBank:WP_050438688.1;Name=WP_050438688.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080172.1;locus_tag=AC00_RS29090;partial=true;product=IS66-like element ISEc43 family transposase;protein_id=WP_050438688.1;start_range=.,1;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 1261 1521 . + . ID=gene-AC00_RS31480;Name=AC00_RS31480;end_range=1521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31480;partial=true;pseudo=true NZ_JJLU01000200.1 Protein Homology CDS 1261 1521 . + 0 ID=cds-AC00_RS31480;Parent=gene-AC00_RS31480;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AC00_RS31480;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 1736 1927 . - . ID=gene-AC00_RS00175;Name=AC00_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00175;old_locus_tag=AC00_5324 NZ_JJLU01000200.1 Protein Homology CDS 1736 1927 . - 0 ID=cds-WP_001027514.1;Parent=gene-AC00_RS00175;Dbxref=GenBank:WP_001027514.1;Name=WP_001027514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016238862.1;locus_tag=AC00_RS00175;product=hypothetical protein;protein_id=WP_001027514.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 1924 2346 . - . ID=gene-AC00_RS00170;Name=AC00_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00170;old_locus_tag=AC00_5325 NZ_JJLU01000200.1 Protein Homology CDS 1924 2346 . - 0 ID=cds-WP_032282341.1;Parent=gene-AC00_RS00170;Dbxref=GenBank:WP_032282341.1;Name=WP_032282341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052650.1;locus_tag=AC00_RS00170;product=DUF1380 family protein;protein_id=WP_032282341.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 2393 2818 . - . ID=gene-AC00_RS00165;Name=AC00_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00165;old_locus_tag=AC00_5326 NZ_JJLU01000200.1 Protein Homology CDS 2393 2818 . - 0 ID=cds-WP_001198900.1;Parent=gene-AC00_RS00165;Dbxref=GenBank:WP_001198900.1;Name=WP_001198900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001198918.1;locus_tag=AC00_RS00165;product=antirestriction protein;protein_id=WP_001198900.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 3235 4011 . - . ID=gene-AC00_RS31040;Name=AC00_RS31040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31040;old_locus_tag=AC00_5327 NZ_JJLU01000200.1 Protein Homology CDS 3235 4011 . - 0 ID=cds-WP_001383963.1;Parent=gene-AC00_RS31040;Dbxref=GenBank:WP_001383963.1;Name=WP_001383963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052647.1;locus_tag=AC00_RS31040;product=hypothetical protein;protein_id=WP_001383963.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 4062 4496 . - . ID=gene-AC00_RS00155;Name=AC00_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00155;old_locus_tag=AC00_5328 NZ_JJLU01000200.1 Protein Homology CDS 4062 4496 . - 0 ID=cds-WP_000274503.1;Parent=gene-AC00_RS00155;Dbxref=GenBank:WP_000274503.1;Name=WP_000274503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052646.1;locus_tag=AC00_RS00155;product=DUF1380 family protein;protein_id=WP_000274503.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 4510 4731 . - . ID=gene-AC00_RS00150;Name=AC00_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00150;old_locus_tag=AC00_5329 NZ_JJLU01000200.1 Protein Homology CDS 4510 4731 . - 0 ID=cds-WP_001104881.1;Parent=gene-AC00_RS00150;Dbxref=GenBank:WP_001104881.1;Name=WP_001104881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_858332.1;locus_tag=AC00_RS00150;product=hypothetical protein;protein_id=WP_001104881.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 4732 5415 . - . ID=gene-AC00_RS00145;Name=AC00_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00145;old_locus_tag=AC00_5330 NZ_JJLU01000200.1 Protein Homology CDS 4732 5415 . - 0 ID=cds-WP_000085883.1;Parent=gene-AC00_RS00145;Dbxref=GenBank:WP_000085883.1;Name=WP_000085883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052645.1;locus_tag=AC00_RS00145;product=DNA methylase;protein_id=WP_000085883.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 5492 5779 . - . ID=gene-AC00_RS30100;Name=AC00_RS30100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30100 NZ_JJLU01000200.1 Protein Homology CDS 5492 5779 . - 0 ID=cds-WP_032282338.1;Parent=gene-AC00_RS30100;Dbxref=GenBank:WP_032282338.1;Name=WP_032282338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002430945.1;locus_tag=AC00_RS30100;product=hypothetical protein;protein_id=WP_032282338.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 5932 6894 . + . ID=gene-AC00_RS00140;Name=parM;gbkey=Gene;gene=parM;gene_biotype=protein_coding;gene_synonym=stbA;locus_tag=AC00_RS00140;old_locus_tag=AC00_5332 NZ_JJLU01000200.1 Protein Homology CDS 5932 6894 . + 0 ID=cds-WP_000959884.1;Parent=gene-AC00_RS00140;Dbxref=GenBank:WP_000959884.1;Name=WP_000959884.1;gbkey=CDS;gene=parM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000959884.1;locus_tag=AC00_RS00140;product=plasmid segregation protein ParM;protein_id=WP_000959884.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 6897 7247 . + . ID=gene-AC00_RS00135;Name=AC00_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00135;old_locus_tag=AC00_5333 NZ_JJLU01000200.1 Protein Homology CDS 6897 7247 . + 0 ID=cds-WP_000361389.1;Parent=gene-AC00_RS00135;Dbxref=GenBank:WP_000361389.1;Name=WP_000361389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001630992.1;locus_tag=AC00_RS00135;product=plasmid partitioning/stability family protein;protein_id=WP_000361389.1;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 7448 7651 . - . ID=gene-AC00_RS00130;Name=AC00_RS00130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00130;old_locus_tag=AC00_5334;partial=true;pseudo=true;start_range=.,7448 NZ_JJLU01000200.1 Protein Homology CDS 7448 7651 . - 0 ID=cds-AC00_RS00130;Parent=gene-AC00_RS00130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052678.1;locus_tag=AC00_RS00130;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7448;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 7779 8013 . - . ID=gene-AC00_RS0126480;Name=AC00_RS0126480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS0126480;pseudo=true NZ_JJLU01000200.1 Protein Homology CDS 7779 8013 . - 0 ID=cds-AC00_RS0126480;Parent=gene-AC00_RS0126480;Note=frameshifted%3B internal stop;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052677.1;locus_tag=AC00_RS0126480;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 8949 9605 . - . ID=gene-AC00_RS29120;Name=AC00_RS29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS29120 NZ_JJLU01000200.1 GeneMarkS-2+ CDS 8949 9605 . - 0 ID=cds-WP_071999305.1;Parent=gene-AC00_RS29120;Dbxref=GenBank:WP_071999305.1;Name=WP_071999305.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS29120;product=AlbA family DNA-binding domain-containing protein;protein_id=WP_071999305.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 9659 10318 . + . ID=gene-AC00_RS00125;Name=AC00_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00125;old_locus_tag=AC00_5337 NZ_JJLU01000200.1 Protein Homology CDS 9659 10318 . + 0 ID=cds-WP_000412211.1;Parent=gene-AC00_RS00125;Dbxref=GenBank:WP_000412211.1;Name=WP_000412211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011152976.1;locus_tag=AC00_RS00125;product=type A-1 chloramphenicol O-acetyltransferase;protein_id=WP_000412211.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 10519 10896 . - . ID=gene-AC00_RS00120;Name=AC00_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00120;old_locus_tag=AC00_5338 NZ_JJLU01000200.1 Protein Homology CDS 10519 10896 . - 0 ID=cds-WP_000656305.1;Parent=gene-AC00_RS00120;Dbxref=GenBank:WP_000656305.1;Name=WP_000656305.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000656306.1;locus_tag=AC00_RS00120;product=GNAT family N-acetyltransferase;protein_id=WP_000656305.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 10963 13929 . - . ID=gene-AC00_RS0126495;Name=AC00_RS0126495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126495;old_locus_tag=AC00_5339 NZ_JJLU01000200.1 Protein Homology CDS 10963 13929 . - 0 ID=cds-WP_001138064.1;Parent=gene-AC00_RS0126495;Dbxref=GenBank:WP_001138064.1;Name=WP_001138064.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001138064.1;locus_tag=AC00_RS0126495;product=Tn3-like element TnAs3 family transposase;protein_id=WP_001138064.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 13932 14492 . - . ID=gene-AC00_RS00115;Name=AC00_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00115;old_locus_tag=AC00_5341 NZ_JJLU01000200.1 Protein Homology CDS 13932 14492 . - 0 ID=cds-WP_000147567.1;Parent=gene-AC00_RS00115;Dbxref=GenBank:WP_000147567.1;Name=WP_000147567.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000147566.1;locus_tag=AC00_RS00115;product=recombinase family protein;protein_id=WP_000147567.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 14618 14818 . - . ID=gene-AC00_RS31805;Name=AC00_RS31805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31805;old_locus_tag=AC00_5342 NZ_JJLU01000200.1 Protein Homology CDS 14618 14818 . - 0 ID=cds-WP_000993264.1;Parent=gene-AC00_RS31805;Dbxref=GenBank:WP_000993264.1;Name=WP_000993264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000993264.1;locus_tag=AC00_RS31805;product=DUF3330 domain-containing protein;protein_id=WP_000993264.1;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 14918 15202 . - . ID=gene-AC00_RS31810;Name=AC00_RS31810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31810;partial=true;pseudo=true;start_range=.,14918 NZ_JJLU01000200.1 Protein Homology CDS 14918 15202 . - 0 ID=cds-AC00_RS31810;Parent=gene-AC00_RS31810;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=AC00_RS31810;partial=true;product=hypothetical protein;pseudo=true;start_range=.,14918;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 15171 16184 . - . ID=gene-AC00_RS00105;Name=intI1;gbkey=Gene;gene=intI1;gene_biotype=protein_coding;locus_tag=AC00_RS00105;old_locus_tag=AC00_5343 NZ_JJLU01000200.1 Protein Homology CDS 15171 16184 . - 0 ID=cds-WP_000845039.1;Parent=gene-AC00_RS00105;Dbxref=GenBank:WP_000845039.1;Name=WP_000845039.1;gbkey=CDS;gene=intI1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012077405.1;locus_tag=AC00_RS00105;product=class 1 integron integrase IntI1;protein_id=WP_000845039.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 16329 16826 . + . ID=gene-AC00_RS0126505;Name=dfrA12;gbkey=Gene;gene=dfrA12;gene_biotype=protein_coding;locus_tag=AC00_RS0126505 NZ_JJLU01000200.1 Protein Homology CDS 16329 16826 . + 0 ID=cds-WP_001083725.1;Parent=gene-AC00_RS0126505;Dbxref=GenBank:WP_001083725.1;Name=WP_001083725.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrA12;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187529.1;locus_tag=AC00_RS0126505;product=trimethoprim-resistant dihydrofolate reductase DfrA12;protein_id=WP_001083725.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 16938 17228 . + . ID=gene-AC00_RS30790;Name=AC00_RS30790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS30790 NZ_JJLU01000200.1 Protein Homology CDS 16938 17228 . + 0 ID=cds-WP_001336345.1;Parent=gene-AC00_RS30790;Dbxref=GenBank:WP_001336345.1;Name=WP_001336345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017990.6;locus_tag=AC00_RS30790;product=DUF1010 domain-containing protein;protein_id=WP_001336345.1;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 17234 18072 . + . ID=gene-AC00_RS00100;Name=AC00_RS00100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00100;old_locus_tag=AC00_5345;pseudo=true NZ_JJLU01000200.1 Protein Homology CDS 17234 18072 . + 0 ID=cds-AC00_RS00100;Parent=gene-AC00_RS00100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048608579.1;locus_tag=AC00_RS00100;product=AadA family aminoglycoside 3''-O-nucleotidyltransferase;pseudo=true;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 18189 18536 . + . ID=gene-AC00_RS0126510;Name=AC00_RS0126510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126510 NZ_JJLU01000200.1 Protein Homology CDS 18189 18536 . + 0 ID=cds-WP_000679427.1;Parent=gene-AC00_RS0126510;Dbxref=GenBank:WP_000679427.1;Name=WP_000679427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1;locus_tag=AC00_RS0126510;product=quaternary ammonium compound efflux SMR transporter QacE delta 1;protein_id=WP_000679427.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 18530 19369 . + . ID=gene-AC00_RS00095;Name=sul1;gbkey=Gene;gene=sul1;gene_biotype=protein_coding;locus_tag=AC00_RS00095;old_locus_tag=AC00_5346 NZ_JJLU01000200.1 Protein Homology CDS 18530 19369 . + 0 ID=cds-WP_000259031.1;Parent=gene-AC00_RS00095;Dbxref=GenBank:WP_000259031.1;Name=WP_000259031.1;gbkey=CDS;gene=sul1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1;locus_tag=AC00_RS00095;product=sulfonamide-resistant dihydropteroate synthase Sul1;protein_id=WP_000259031.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 19497 19700 . + . ID=gene-AC00_RS0126515;Name=AC00_RS0126515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126515 NZ_JJLU01000200.1 Protein Homology CDS 19497 19700 . + 0 ID=cds-WP_000376616.1;Parent=gene-AC00_RS0126515;Dbxref=GenBank:WP_000376616.1;Name=WP_000376616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000376616.1;locus_tag=AC00_RS0126515;product=hypothetical protein;protein_id=WP_000376616.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 19856 21061 . + . ID=gene-AC00_RS00090;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=AC00_RS00090;old_locus_tag=AC00_5347 NZ_JJLU01000200.1 Protein Homology CDS 19856 21061 . + 0 ID=cds-WP_000184001.1;Parent=gene-AC00_RS00090;Dbxref=GenBank:WP_000184001.1;Name=WP_000184001.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004896675.1;locus_tag=AC00_RS00090;product=chromate efflux transporter;protein_id=WP_000184001.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 21072 21377 . + . ID=gene-AC00_RS00085;Name=AC00_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00085;old_locus_tag=AC00_5348 NZ_JJLU01000200.1 Protein Homology CDS 21072 21377 . + 0 ID=cds-WP_000130000.1;Parent=gene-AC00_RS00085;Dbxref=GenBank:WP_000130000.1;Name=WP_000130000.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206574.1;locus_tag=AC00_RS00085;product=PadR family transcriptional regulator;protein_id=WP_000130000.1;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 21421 21486 . + . ID=gene-AC00_RS31815;Name=AC00_RS31815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31815;partial=true;pseudo=true;start_range=.,21421 NZ_JJLU01000200.1 Protein Homology CDS 21421 21486 . + 0 ID=cds-AC00_RS31815;Parent=gene-AC00_RS31815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=AC00_RS31815;partial=true;product=EAL domain-containing protein;pseudo=true;start_range=.,21421;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 21604 22368 . + . ID=gene-AC00_RS0126520;Name=AC00_RS0126520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126520 NZ_JJLU01000200.1 Protein Homology CDS 21604 22368 . + 0 ID=cds-WP_001389365.1;Parent=gene-AC00_RS0126520;Dbxref=GenBank:WP_001389365.1;Name=WP_001389365.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389365.1;locus_tag=AC00_RS0126520;product=IS6-like element IS6100 family transposase;protein_id=WP_001389365.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 22861 23445 . - . ID=gene-AC00_RS00080;Name=mphR(A);gbkey=Gene;gene=mphR(A);gene_biotype=protein_coding;locus_tag=AC00_RS00080;old_locus_tag=AC00_5351 NZ_JJLU01000200.1 Protein Homology CDS 22861 23445 . - 0 ID=cds-WP_001137892.1;Parent=gene-AC00_RS00080;Dbxref=GenBank:WP_001137892.1;Name=WP_001137892.1;gbkey=CDS;gene=mphR(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_001137892.1;locus_tag=AC00_RS00080;product=macrolide-binding transcriptional repressor MphR(A);protein_id=WP_001137892.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 23445 24683 . - . ID=gene-AC00_RS00075;Name=mrx(A);gbkey=Gene;gene=mrx(A);gene_biotype=protein_coding;gene_synonym=mrx;locus_tag=AC00_RS00075;old_locus_tag=AC00_5352 NZ_JJLU01000200.1 Protein Homology CDS 23445 24683 . - 0 ID=cds-WP_000004159.1;Parent=gene-AC00_RS00075;Dbxref=GenBank:WP_000004159.1;Name=WP_000004159.1;gbkey=CDS;gene=mrx(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004159.1;locus_tag=AC00_RS00075;product=macrolide resistance MFS transporter Mrx(A);protein_id=WP_000004159.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 24680 25585 . - . ID=gene-AC00_RS0126530;Name=AC00_RS0126530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126530 NZ_JJLU01000200.1 Protein Homology CDS 24680 25585 . - 0 ID=cds-WP_000219391.1;Parent=gene-AC00_RS0126530;Dbxref=GenBank:WP_000219391.1;Name=WP_000219391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219391.1;locus_tag=AC00_RS0126530;product=Mph(A) family macrolide 2'-phosphotransferase;protein_id=WP_000219391.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 25707 26411 . - . ID=gene-AC00_RS00070;Name=AC00_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00070;old_locus_tag=AC00_5354 NZ_JJLU01000200.1 Protein Homology CDS 25707 26411 . - 0 ID=cds-WP_001067834.1;Parent=gene-AC00_RS00070;Dbxref=GenBank:WP_001067834.1;Name=WP_001067834.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324562.1;locus_tag=AC00_RS00070;product=IS6-like element IS26 family transposase;protein_id=WP_001067834.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 26458 27726 . - . ID=gene-AC00_RS00065;Name=AC00_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00065;old_locus_tag=AC00_5355 NZ_JJLU01000200.1 Protein Homology CDS 26458 27726 . - 0 ID=cds-WP_000179845.1;Parent=gene-AC00_RS00065;Dbxref=GenBank:WP_000179845.1;Name=WP_000179845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020606.6;locus_tag=AC00_RS00065;product=DNA-binding domain-containing protein;protein_id=WP_000179845.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 27801 28469 . - . ID=gene-AC00_RS00060;Name=AC00_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00060;old_locus_tag=AC00_5356 NZ_JJLU01000200.1 Protein Homology CDS 27801 28469 . - 0 ID=cds-WP_001300294.1;Parent=gene-AC00_RS00060;Dbxref=GenBank:WP_001300294.1;Name=WP_001300294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229646.1;locus_tag=AC00_RS00060;product=EAL domain-containing protein;protein_id=WP_001300294.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 28505 28741 . - . ID=gene-AC00_RS00055;Name=merE;gbkey=Gene;gene=merE;gene_biotype=protein_coding;locus_tag=AC00_RS00055;old_locus_tag=AC00_5357 NZ_JJLU01000200.1 Protein Homology CDS 28505 28741 . - 0 ID=cds-WP_000993386.1;Parent=gene-AC00_RS00055;Dbxref=GenBank:WP_000993386.1;Name=WP_000993386.1;gbkey=CDS;gene=merE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102820.1;locus_tag=AC00_RS00055;product=broad-spectrum mercury transporter MerE;protein_id=WP_000993386.1;transl_table=11 NZ_JJLU01000200.1 RefSeq gene 28738 29100 . - . ID=gene-AC00_RS00050;Name=merD;gbkey=Gene;gene=merD;gene_biotype=protein_coding;locus_tag=AC00_RS00050;old_locus_tag=AC00_5358 NZ_JJLU01000200.1 Protein Homology CDS 28738 29100 . - 0 ID=cds-WP_001277456.1;Parent=gene-AC00_RS00050;Dbxref=GenBank:WP_001277456.1;Name=WP_001277456.1;Ontology_term=GO:0006355,GO:0045892,GO:0046689,GO:0003677;gbkey=CDS;gene=merD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA,response to mercury ion|0046689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1;locus_tag=AC00_RS00050;product=mercury resistance co-regulator MerD;protein_id=WP_001277456.1;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 29118 29627 . - . ID=gene-AC00_RS00045;Name=AC00_RS00045;end_range=29627,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00045;old_locus_tag=AC00_5359;partial=true;pseudo=true NZ_JJLU01000200.1 Protein Homology CDS 29118 29627 . - 0 ID=cds-AC00_RS00045;Parent=gene-AC00_RS00045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29627,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1;locus_tag=AC00_RS00045;partial=true;product=mercury(II) reductase;pseudo=true;transl_table=11 NZ_JJLU01000200.1 RefSeq pseudogene 29776 29931 . - . ID=gene-AC00_RS29165;Name=AC00_RS29165;end_range=29931,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS29165;partial=true;pseudo=true NZ_JJLU01000200.1 Protein Homology CDS 29776 29931 . - 0 ID=cds-AC00_RS29165;Parent=gene-AC00_RS29165;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=29931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1;locus_tag=AC00_RS29165;partial=true;product=class A beta-lactamase;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000201.1 1 1659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000201.1 RefSeq region 1 1659 . + . ID=NZ_JJLU01000201.1:1..1659;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000201.1 RefSeq pseudogene 1 614 . - . ID=gene-AC00_RS00040;Name=AC00_RS00040;end_range=614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00040;old_locus_tag=AC00_5360;partial=true;pseudo=true;start_range=.,1 NZ_JJLU01000201.1 Protein Homology CDS 1 614 . - 0 ID=cds-AC00_RS00040;Parent=gene-AC00_RS00040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=614,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231106.1;locus_tag=AC00_RS00040;partial=true;product=DUF3987 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JJLU01000201.1 RefSeq pseudogene 732 1058 . - . ID=gene-AC00_RS31485;Name=AC00_RS31485;end_range=1058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31485;old_locus_tag=AC00_5362;partial=true;pseudo=true;start_range=.,732 NZ_JJLU01000201.1 Protein Homology CDS 732 1058 . - 0 ID=cds-AC00_RS31485;Parent=gene-AC00_RS31485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1058,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416485.4;locus_tag=AC00_RS31485;partial=true;product=inverse autotransporter beta domain-containing protein;pseudo=true;start_range=.,732;transl_table=11 NZ_JJLU01000201.1 RefSeq pseudogene 1063 1362 . - . ID=gene-AC00_RS31490;Name=AC00_RS31490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31490;partial=true;pseudo=true;start_range=.,1063 NZ_JJLU01000201.1 Protein Homology CDS 1063 1362 . - 0 ID=cds-AC00_RS31490;Parent=gene-AC00_RS31490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227772.1;locus_tag=AC00_RS31490;partial=true;product=inverse autotransporter beta domain-containing protein;pseudo=true;start_range=.,1063;transl_table=11 NZ_JJLU01000201.1 RefSeq gene 1426 1659 . + . ID=gene-AC00_RS0126540;Name=AC00_RS0126540;end_range=1659,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126540;old_locus_tag=AC00_5363;partial=true NZ_JJLU01000201.1 Protein Homology CDS 1426 1659 . + 0 ID=cds-WP_001408888.1-3;Parent=gene-AC00_RS0126540;Dbxref=GenBank:WP_001408888.1;Name=WP_001408888.1;end_range=1659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=AC00_RS0126540;partial=true;product=IS1-like element transposase;protein_id=WP_001408888.1;transl_table=11 ##sequence-region NZ_JJLU01000202.1 1 5992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000202.1 RefSeq region 1 5992 . + . ID=NZ_JJLU01000202.1:1..5992;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000202.1 RefSeq pseudogene 5 210 . - . ID=gene-AC00_RS31820;Name=AC00_RS31820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31820;pseudo=true NZ_JJLU01000202.1 Protein Homology CDS 5 210 . - 0 ID=cds-AC00_RS31820;Parent=gene-AC00_RS31820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AC00_RS31820;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000202.1 RefSeq pseudogene 278 451 . + . ID=gene-AC00_RS31495;Name=AC00_RS31495;end_range=451,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31495;partial=true;pseudo=true NZ_JJLU01000202.1 Protein Homology CDS 278 451 . + 0 ID=cds-AC00_RS31495;Parent=gene-AC00_RS31495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AC00_RS31495;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JJLU01000202.1 RefSeq gene 449 679 . - . ID=gene-AC00_RS31500;Name=AC00_RS31500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31500 NZ_JJLU01000202.1 Protein Homology CDS 449 679 . - 0 ID=cds-WP_071999306.1;Parent=gene-AC00_RS31500;Dbxref=GenBank:WP_071999306.1;Name=WP_071999306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001426396.1;locus_tag=AC00_RS31500;product=hypothetical protein;protein_id=WP_071999306.1;transl_table=11 NZ_JJLU01000202.1 RefSeq gene 899 1024 . - . ID=gene-AC00_RS0126555;Name=AC00_RS0126555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS0126555 NZ_JJLU01000202.1 Protein Homology CDS 899 1024 . - 0 ID=cds-WP_001372321.1-2;Parent=gene-AC00_RS0126555;Dbxref=GenBank:WP_001372321.1;Name=WP_001372321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052660.1;locus_tag=AC00_RS0126555;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_001372321.1;transl_table=11 NZ_JJLU01000202.1 RefSeq pseudogene 966 1115 . - . ID=gene-AC00_RS31505;Name=mok;gbkey=Gene;gene=mok;gene_biotype=pseudogene;locus_tag=AC00_RS31505;partial=true;pseudo=true;start_range=.,966 NZ_JJLU01000202.1 Protein Homology CDS 966 1115 . - 0 ID=cds-AC00_RS31505;Parent=gene-AC00_RS31505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mok;inference=COORDINATES: protein motif:HMM:NF010277.0;locus_tag=AC00_RS31505;partial=true;product=plasmid maintenance protein Mok;pseudo=true;start_range=.,966;transl_table=11 NZ_JJLU01000202.1 RefSeq gene 1137 1325 . + . ID=gene-AC00_RS31050;Name=AC00_RS31050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS31050;old_locus_tag=AC00_5364 NZ_JJLU01000202.1 GeneMarkS-2+ CDS 1137 1325 . + 0 ID=cds-WP_001299721.1-2;Parent=gene-AC00_RS31050;Dbxref=GenBank:WP_001299721.1;Name=WP_001299721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC00_RS31050;product=hypothetical protein;protein_id=WP_001299721.1;transl_table=11 NZ_JJLU01000202.1 RefSeq pseudogene 1294 2056 . - . ID=gene-AC00_RS00030;Name=AC00_RS00030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00030;old_locus_tag=AC00_5365;pseudo=true NZ_JJLU01000202.1 Protein Homology CDS 1294 2056 . - 0 ID=cds-AC00_RS00030;Parent=gene-AC00_RS00030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052659.1;locus_tag=AC00_RS00030;product=plasmid SOS inhibition protein A;pseudo=true;transl_table=11 NZ_JJLU01000202.1 RefSeq gene 2053 2487 . - . ID=gene-AC00_RS00025;Name=psiB;gbkey=Gene;gene=psiB;gene_biotype=protein_coding;locus_tag=AC00_RS00025;old_locus_tag=AC00_5366 NZ_JJLU01000202.1 Protein Homology CDS 2053 2487 . - 0 ID=cds-WP_000845901.1-2;Parent=gene-AC00_RS00025;Dbxref=GenBank:WP_000845901.1;Name=WP_000845901.1;gbkey=CDS;gene=psiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000845953.1;locus_tag=AC00_RS00025;product=conjugation system SOS inhibitor PsiB;protein_id=WP_000845901.1;transl_table=11 NZ_JJLU01000202.1 RefSeq gene 2542 4500 . - . ID=gene-AC00_RS00020;Name=AC00_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00020;old_locus_tag=AC00_5367 NZ_JJLU01000202.1 Protein Homology CDS 2542 4500 . - 0 ID=cds-WP_001145469.1;Parent=gene-AC00_RS00020;Dbxref=GenBank:WP_001145469.1;Name=WP_001145469.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000117326.1;locus_tag=AC00_RS00020;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_001145469.1;transl_table=11 NZ_JJLU01000202.1 RefSeq gene 4559 4792 . - . ID=gene-AC00_RS00015;Name=AC00_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00015;old_locus_tag=AC00_5368 NZ_JJLU01000202.1 Protein Homology CDS 4559 4792 . - 0 ID=cds-WP_000006004.1;Parent=gene-AC00_RS00015;Dbxref=GenBank:WP_000006004.1;Name=WP_000006004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_958724.1;locus_tag=AC00_RS00015;product=DUF905 domain-containing protein;protein_id=WP_000006004.1;transl_table=11 NZ_JJLU01000202.1 RefSeq gene 4848 5375 . - . ID=gene-AC00_RS00010;Name=AC00_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC00_RS00010;old_locus_tag=AC00_5369 NZ_JJLU01000202.1 Protein Homology CDS 4848 5375 . - 0 ID=cds-WP_000290793.1;Parent=gene-AC00_RS00010;Dbxref=GenBank:WP_000290793.1;Name=WP_000290793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052656.1;locus_tag=AC00_RS00010;product=single-stranded DNA-binding protein;protein_id=WP_000290793.1;transl_table=11 NZ_JJLU01000202.1 RefSeq pseudogene 5401 5606 . - . ID=gene-AC00_RS31825;Name=AC00_RS31825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31825;pseudo=true NZ_JJLU01000202.1 Protein Homology CDS 5401 5606 . - 0 ID=cds-AC00_RS31825;Parent=gene-AC00_RS31825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000547968.1;locus_tag=AC00_RS31825;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 NZ_JJLU01000202.1 RefSeq pseudogene 5674 5847 . + . ID=gene-AC00_RS31510;Name=AC00_RS31510;end_range=5847,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS31510;partial=true;pseudo=true NZ_JJLU01000202.1 Protein Homology CDS 5674 5847 . + 0 ID=cds-AC00_RS31510;Parent=gene-AC00_RS31510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052655.1;locus_tag=AC00_RS31510;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JJLU01000203.1 1 594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444135 NZ_JJLU01000203.1 RefSeq region 1 594 . + . ID=NZ_JJLU01000203.1:1..594;Dbxref=taxon:1444135;collection-date=2009-04-11;country=Tanzania;gbkey=Src;genome=genomic;isolation-source=stool;mol_type=genomic DNA;nat-host=Homo sapiens;strain=1-250-04_S3_C1 NZ_JJLU01000203.1 RefSeq pseudogene 105 594 . - . ID=gene-AC00_RS00005;Name=AC00_RS00005;end_range=594,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC00_RS00005;old_locus_tag=AC00_5370;partial=true;pseudo=true NZ_JJLU01000203.1 Protein Homology CDS 105 594 . - 1 ID=cds-AC00_RS00005;Parent=gene-AC00_RS00005;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=594,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311047.1;locus_tag=AC00_RS00005;partial=true;product=D-lactate dehydrogenase;pseudo=true;transl_table=11 ###